Psyllid ID: psy16752

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
Protein Sequence
MGNKNQNSSSNYGGEYNYHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMSKNKKKKLKKKAKKENEMLMKQMKQSLIL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEcccEEEEEEEccccccccccccccEEEEEEEcccccHHHHHHHHHHHHccccccccccccccccccEEEccccccEEEEEcccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEccccEEEcccccccccccccccccHHcccccHHcccHHHccccccccEEccHHHcccEEEEEEEEEcccEEEEEEEcHHHcccccHHHHHHHHHHHHHHHHHHccccccccccEccccEEEEEEccccEEEEEEEEccccEHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcEEcccccHHHEEccEEEHHHcEEccEEccHHHccccccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mgnknqnsssnyggeynyhnkynnrydndyslsdeshdeeenenkqfssdedeqedpndyckggyhpvkigMLFNNRyrvtrklgwghfstvwftgsktqvlvspqfpetaldeikllkcvrdgdvndpyRERVVQLLDDfkicgvngtHVCMVFEVLGHNLLKLIVKSkyrgipleNVRSIIRQILQGLNYLHTKCriihtdikpenvlLCVDEARVKTLALNATELaatghklpvsfcstapvqEYSELSRRMSKNKKKKLKKKAKKENEMLMKQMKQSLIL
Flexible Loop (DISEMBL)
mgnknqnsssnygGEYNYHNKYNNRYDNDYSLSDESHDEEENEnkqfssdedeqedPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELaatghklpvsfcsTAPVqeyselsrrmsknkkkklkkkakkenEMLMKQMKQSLIL
Low Complexity Region (SEG)
MGNKNQNSSSNYGGEYNYHNKYNNRYDNDYSLsdeshdeeenenKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKtlalnatelaatGHKLPVSFCSTAPVQEYSELSRRMSknkkkklkkkakkenemlmkQMKQSLIL
Disordered region (IsUnstruct)
***********************************************************YCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTA*****************************************
Disordered Region (DISOPRED)
*******************************************************DPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVR*****DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK**********************************************************MKQS*IL
Disordered Region (DISEMBL)
**********NYGGEYNYHNKYNNRYDNDYSL*************************NDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYS*******************KENEMLMK********
Disordered Region (DISPRO)
****************NYHNKYNNRYDNDYS*****************SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCST***************NKKKKLKKKAKKENEMLMKQMKQSLIL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNKNQNSSSNYGGEYNYHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSxxxxxxxxxxxxxxxxxxxxxxxxxxxxSLIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	284	2.2.26 [Sep-21-2011]
Q96SB4	655	SRSF protein kinase 1 OS=	yes	N/A	0.728	0.316	0.648	4e-74
Q5RD27	655	SRSF protein kinase 1 OS=	yes	N/A	0.728	0.316	0.648	6e-74
O54781	681	SRSF protein kinase 2 OS=	yes	N/A	0.704	0.293	0.636	7e-74
P78362	688	SRSF protein kinase 2 OS=	no	N/A	0.704	0.290	0.636	1e-73
O70551	648	SRSF protein kinase 1 OS=	no	N/A	0.728	0.319	0.643	6e-73
Q9UPE1	567	SRSF protein kinase 3 OS=	no	N/A	0.693	0.347	0.625	5e-72
Q9Z0G2	565	SRSF protein kinase 3 OS=	no	N/A	0.693	0.348	0.625	8e-72
B8Y466	566	SRSF protein kinase 3 OS=	no	N/A	0.693	0.348	0.625	3e-71
Q03563	1003	Serine/threonine-protein	yes	N/A	0.704	0.199	0.543	3e-59
Q61IS6	1132	Serine/threonine-protein	N/A	N/A	0.700	0.175	0.550	8e-59

>sp|Q96SB4|SRPK1_HUMAN SRSF protein kinase 1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2

 Score =  278 bits (710), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 140/216 (64%), Positives = 163/216 (75%), Gaps = 9/216 (4%)

Query: 38  DEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT-- 95
           D  E E +   SD+DEQEDPNDYCKGGYH VKIG LFN RY V RKLGWGHFSTVW +  
Sbjct: 40  DLPEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWD 99

Query: 96  --GSK---TQVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT 149
             G K    +V+ S + + ETALDEI+LLK VR+ D NDP RE VVQLLDDFKI GVNGT
Sbjct: 100 IQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT 159

Query: 150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV 209
           H+CMVFEVLGH+LLK I+KS Y+G+PL  V+ II+Q+LQGL+YLHTKCRIIHTDIKPEN+
Sbjct: 160 HICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI 219

Query: 210 LLCVDEARVKTLALNATELAATGHKLPV-SFCSTAP 244
           LL V+E  ++ LA  ATE   +G   P  S  STAP
Sbjct: 220 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 255

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Isoform 2 phosphorylates SFRS2, ZRSR2, LBR and PRM1. Isoform 2 phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Isoform 2 can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Isoform 1 and isoform 2 can induce splicing of exon 10 in MAPT/TAU. The ratio of isoform 1/isoform 2 plays a decisive role in determining cell fate in K562 leukaemic cell line: isoform 2 favors proliferation where as isoform 1 favors differentiation.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q5RD27|SRPK1_PONAB SRSF protein kinase 1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2

 Score =  277 bits (709), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 140/216 (64%), Positives = 163/216 (75%), Gaps = 9/216 (4%)

Query: 38  DEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT-- 95
           D  E E +   SD+DEQEDPNDYCKGGYH VKIG LFN RY V RKLGWGHFSTVW +  
Sbjct: 40  DLPEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWD 99

Query: 96  --GSK---TQVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT 149
             G K    +V+ S + + ETALDEI+LLK VR+ D NDP RE VVQLLDDFKI GVNGT
Sbjct: 100 IQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT 159

Query: 150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV 209
           H+CMVFEVLGH+LLK I+KS Y+G+PL  V+ II+Q+LQGL+YLHTKCRIIHTDIKPEN+
Sbjct: 160 HICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI 219

Query: 210 LLCVDEARVKTLALNATELAATGHKLPV-SFCSTAP 244
           LL V+E  ++ LA  ATE   +G   P  S  STAP
Sbjct: 220 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 255

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O54781|SRPK2_MOUSE SRSF protein kinase 2 OS=Mus musculus GN=Srpk2 PE=1 SV=2

 Score =  277 bits (708), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 133/209 (63%), Positives = 159/209 (76%), Gaps = 9/209 (4%)

Query: 47  FSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS-------KT 99
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW             
Sbjct: 48  LGSDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAM 107

Query: 100 QVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL 158
           +V+ S Q + ETALDEIKLLKCVR+ D +DP ++ VVQL+DDFKI G+NG HVCMVFEVL
Sbjct: 108 KVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVL 167

Query: 159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV 218
           GH+LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V
Sbjct: 168 GHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYV 227

Query: 219 KTLALNATELAATGHKLPV-SFCSTAPVQ 246
           + +A  ATE    G   P  S  STAP Q
Sbjct: 228 RRMAAEATEWQKAGAPPPSGSAVSTAPQQ 256

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P78362|SRPK2_HUMAN SRSF protein kinase 2 OS=Homo sapiens GN=SRPK2 PE=1 SV=3

 Score =  276 bits (706), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 133/209 (63%), Positives = 159/209 (76%), Gaps = 9/209 (4%)

Query: 47  FSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS-------KT 99
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW             
Sbjct: 50  LGSDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAM 109

Query: 100 QVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL 158
           +V+ S Q + ETALDEIKLLKCVR+ D +DP ++ VVQL+DDFKI G+NG HVCMVFEVL
Sbjct: 110 KVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVL 169

Query: 159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV 218
           GH+LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V
Sbjct: 170 GHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYV 229

Query: 219 KTLALNATELAATGHKLPV-SFCSTAPVQ 246
           + +A  ATE    G   P  S  STAP Q
Sbjct: 230 RRMAAEATEWQKAGAPPPSGSAVSTAPQQ 258

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28. Can mediate hepatitis B virus (HBV) core protein phosphorylation. Plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O70551|SRPK1_MOUSE SRSF protein kinase 1 OS=Mus musculus GN=Srpk1 PE=1 SV=2

 Score =  274 bits (700), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 139/216 (64%), Positives = 162/216 (75%), Gaps = 9/216 (4%)

Query: 38  DEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT-- 95
           D  E E +   SD+DEQEDPNDYCKGGYH VKIG LFN RY V RKLGWGHFSTVW +  
Sbjct: 40  DIPEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWD 99

Query: 96  --GSK---TQVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT 149
             G K    +V+ S + + ETALDEI+LLK VR+ D NDP  E VVQLLDDFKI GVNGT
Sbjct: 100 IQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNGEMVVQLLDDFKISGVNGT 159

Query: 150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV 209
           H+CMVFEVLGH+LLK I+KS Y+G+PL  V+ II+Q+LQGL+YLHTKCRIIHTDIKPEN+
Sbjct: 160 HICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI 219

Query: 210 LLCVDEARVKTLALNATELAATGHKLPV-SFCSTAP 244
           LL V+E  ++ LA  ATE   +G   P  S  STAP
Sbjct: 220 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 255

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UPE1|SRPK3_HUMAN SRSF protein kinase 3 OS=Homo sapiens GN=SRPK3 PE=2 SV=2

 Score =  271 bits (692), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 130/208 (62%), Positives = 153/208 (73%), Gaps = 11/208 (5%)

Query: 47  FSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW---------FTGS 97
             SD++EQEDP DYCKGGYHPVKIG +FN RY V RKLGWGHFSTVW         F   
Sbjct: 48  LGSDDEEQEDPKDYCKGGYHPVKIGDVFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVAL 107

Query: 98  KTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV 157
           K  V  +  + ETA+DEIKLLKCVRD D +DP RE +VQL+DDF+I GVNG HVCMV EV
Sbjct: 108 KV-VKSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVHVCMVLEV 166

Query: 158 LGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR 217
           LGH LLK I+KS Y+G+P+  V+SI+RQ+L GL+YLHTKC+IIHTDIKPEN+LLCV +A 
Sbjct: 167 LGHQLLKWIIKSNYQGLPVPCVKSIVRQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAY 226

Query: 218 VKTLALNATELAATGHKLPV-SFCSTAP 244
           ++ LA  ATE    G   P  S  STAP
Sbjct: 227 IRRLAAEATEWQQAGAPPPSRSIVSTAP 254

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Z0G2|SRPK3_MOUSE SRSF protein kinase 3 OS=Mus musculus GN=Srpk3 PE=2 SV=1

 Score =  270 bits (691), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 130/208 (62%), Positives = 155/208 (74%), Gaps = 11/208 (5%)

Query: 47  FSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW---------FTGS 97
             SD++EQEDP DYCKGGY+PVKIG LFN RY V RKLGWGHFSTVW         F   
Sbjct: 47  LGSDDEEQEDPKDYCKGGYYPVKIGDLFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVAL 106

Query: 98  KTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV 157
           K  V  +  + ETA+DEIKLLKCVRD D +DP RE +VQL+DDF+I GVNG HVCMV EV
Sbjct: 107 KV-VKSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVHVCMVLEV 165

Query: 158 LGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR 217
           LGH LLK I+KS Y+G+P+  V+SI+RQ+L GL+YLHTKC+IIHTDIKPEN+LLCV +A 
Sbjct: 166 LGHQLLKWIIKSNYQGLPVPCVKSIVRQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAY 225

Query: 218 VKTLALNATELAATGHKLPV-SFCSTAP 244
           ++ LA  ATE   +G + P  S  STAP
Sbjct: 226 IRRLAAEATEWQQSGAQPPSRSTVSTAP 253

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|B8Y466|SRPK3_PIG SRSF protein kinase 3 OS=Sus scrofa GN=SRPK3 PE=2 SV=1

 Score =  268 bits (686), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 130/208 (62%), Positives = 154/208 (74%), Gaps = 11/208 (5%)

Query: 47  FSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW---------FTGS 97
             SD++EQEDP DYCKGGY+PVKIG LFN RY V RKLGWGHFSTVW         F   
Sbjct: 48  LGSDDEEQEDPKDYCKGGYYPVKIGDLFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVAL 107

Query: 98  KTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV 157
           K  V  +  + ETA+DEIKLLKCVRD D +DP RE +VQL+DDF+I GVNG HVCMV EV
Sbjct: 108 KV-VKSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVHVCMVLEV 166

Query: 158 LGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR 217
           LGH LLK I+KS Y+G+P+  V+SI+RQ+L GL+YLHTKC+IIHTDIKPEN+LLCV +A 
Sbjct: 167 LGHQLLKWIIKSNYQGLPVPCVKSIVRQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAY 226

Query: 218 VKTLALNATELAATGHKLPV-SFCSTAP 244
           ++ LA  ATE   +G   P  S  STAP
Sbjct: 227 IRRLAAEATEWQQSGAPPPSRSTVSTAP 254

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q03563|SPK1_CAEEL Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=2 SV=3

 Score =  228 bits (582), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 113/208 (54%), Positives = 136/208 (65%), Gaps = 8/208 (3%)

Query: 45  KQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQ---- 100
           +Q  SD++EQEDP DY +GGYHPV IG +FN RY V RKLGWGHFSTVW           
Sbjct: 389 EQLGSDDEEQEDPRDYKRGGYHPVNIGDVFNARYHVIRKLGWGHFSTVWLAWDTQDKRFV 448

Query: 101 ----VLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE 156
               V  +  + E ALDEIKLL  VR  D ND    +VVQLLD+F + G+NG HV MVFE
Sbjct: 449 AMKIVKSAEHYTEAALDEIKLLLSVRSADPNDIGCHKVVQLLDEFTVTGINGQHVAMVFE 508

Query: 157 VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
           VLG NLLKLI++S YRG+ LE VR I RQ+L+ L Y+H KC IIHTDIKPENVL+ +   
Sbjct: 509 VLGCNLLKLIIRSNYRGLHLEQVRKICRQVLEALGYMHEKCGIIHTDIKPENVLITMSRE 568

Query: 217 RVKTLALNATELAATGHKLPVSFCSTAP 244
            +K +A +A        K+  S  STAP
Sbjct: 569 EIKIMAQHAVVARKMNMKMSGSAVSTAP 596

Required for embryogenesis and germline development in both adult hermaphrodites and males. SR-protein kinase (SRPK) that binds directly to and phosphorylates the RS domain of rsp-3/CeSF2 in vitro.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q61IS6|SPK1_CAEBR Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=2

 Score =  227 bits (578), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 115/209 (55%), Positives = 139/209 (66%), Gaps = 10/209 (4%)

Query: 45  KQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW---------FT 95
           +Q  SD++EQEDP DY +GGYHPV IG +FN+RY V RKLGWGHFSTVW         FT
Sbjct: 462 EQLGSDDEEQEDPRDYKRGGYHPVNIGDVFNSRYHVIRKLGWGHFSTVWLAWDTQEKRFT 521

Query: 96  GSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVF 155
             K  V  +  + E ALDEIKLL  VR  D  D    +VVQLLD+F + G+NG HV MVF
Sbjct: 522 AMKI-VKSAEHYTEAALDEIKLLLSVRGADPEDTGCHKVVQLLDEFTVTGINGQHVAMVF 580

Query: 156 EVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
           EVLG NLLKLI++S YRG+ LE VR I +QIL+ L Y+H KC IIHTDIKPENVL+ +  
Sbjct: 581 EVLGCNLLKLIIRSNYRGLHLEQVRKICKQILEALRYMHEKCGIIHTDIKPENVLITMSR 640

Query: 216 ARVKTLALNATELAATGHKLPVSFCSTAP 244
             +K +A +A        K+  S  STAP
Sbjct: 641 EEIKIMAQHAVVARKMNMKMSGSAVSTAP 669

Required for embryogenesis and germline development in both adult hermaphrodites and males. SR-protein kinase (SRPK) that binds directly to and phosphorylates RS domains.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	284
357608413	602	putative Serine/threonine-protein kinase	0.950	0.448	0.613	1e-83
307213496	636	Serine/threonine-protein kinase SRPK1 [H	0.940	0.419	0.611	1e-80
383853273	816	PREDICTED: SRSF protein kinase 3-like [M	0.908	0.316	0.627	2e-79
328788991	616	PREDICTED: serine/threonine-protein kina	0.908	0.418	0.627	3e-79
443707597	673	hypothetical protein CAPTEDRAFT_173738 [	0.820	0.346	0.603	3e-79
380018109	616	PREDICTED: LOW QUALITY PROTEIN: SRSF pro	0.908	0.418	0.627	4e-79
350406251	638	PREDICTED: serine/threonine-protein kina	0.908	0.404	0.627	5e-79
340716349	638	PREDICTED: LOW QUALITY PROTEIN: serine/t	0.908	0.404	0.627	6e-79
322798702	663	hypothetical protein SINV_03865 [Solenop	0.855	0.366	0.648	3e-78
189235234	560	PREDICTED: similar to AGAP005322-PA [Tri	0.915	0.464	0.606	4e-78

>gi|357608413|gb|EHJ65991.1| putative Serine/threonine-protein kinase 23 [Danaus plexippus]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 176/287 (61%), Positives = 218/287 (75%), Gaps = 17/287 (5%)

Query: 5   NQNSSSNYGGEYN-YHNKYNNRYDNDYSLSDESHDEEENENKQFS-SDEDEQEDPNDYCK 62
           N+      GG+ N   N+  NR +  +S S+E+ +E+E+E  Q++ SD++EQED  DYCK
Sbjct: 28  NREEDHGAGGQGNGLRNQNQNRLEPTHSSSNETIEEDEDE--QYACSDDEEQEDSADYCK 85

Query: 63  GGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQFPETALD 113
           GGYHPVKIG LF NRY VTRKLGWGHFSTVW         F   K  V  +P F ETALD
Sbjct: 86  GGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKV-VKSAPHFTETALD 144

Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRG 173
           EIK+LK VRD D +DP R + VQLL+DFKI GVNGTHVCMVFEVLGH+LLKLI+KS YRG
Sbjct: 145 EIKILKAVRDSDPSDPKRNKTVQLLNDFKITGVNGTHVCMVFEVLGHHLLKLILKSNYRG 204

Query: 174 IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGH 233
           IP ENV++IIRQ+L+GL+YLHTKC+IIHTDIKPENVL+CVDEA ++ LA  ATEL + G 
Sbjct: 205 IPRENVKTIIRQVLEGLDYLHTKCKIIHTDIKPENVLVCVDEAYIRKLAAEATELHSLGL 264

Query: 234 KLPVSFCSTAPVQEYSE--LSRRMSKNKKKKLKKKAKKENEMLMKQM 278
           +LP S  STAP +E+ E  ++ +MS+NKKKKLKKKAK+++ +L KQM
Sbjct: 265 RLPHSLISTAP-KEFQEQVVTGKMSRNKKKKLKKKAKRQSMLLKKQM 310

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213496|gb|EFN88905.1| Serine/threonine-protein kinase SRPK1 [Harpegnathos saltator]

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 173/283 (61%), Positives = 211/283 (74%), Gaps = 16/283 (5%)

Query: 9   SSNYGGEYNYHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPV 68
           S     + +Y N + NR +  +S S+E+    E++++ FSS+++EQED +DYCKGGYHPV
Sbjct: 56  SEGATAQRSYSNDHGNRLEQCHSSSNETI---EDDDEVFSSEDEEQEDSSDYCKGGYHPV 112

Query: 69  KIGMLFNNRYRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQFPETALDEIKLLK 119
           KIG LF NRY VTRKLGWGHFSTVW         F   K  V  +  F ETALDEIKLLK
Sbjct: 113 KIGDLFLNRYHVTRKLGWGHFSTVWLCWDLQDKRFVALKV-VKSAAHFTETALDEIKLLK 171

Query: 120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV 179
            VRD D  DP R + VQLL+DFKI G+NG HVCMVFEVLGHNLLKLI+KS YRGIP  NV
Sbjct: 172 DVRDTDPTDPKRSKTVQLLNDFKISGINGLHVCMVFEVLGHNLLKLIIKSNYRGIPRNNV 231

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSF 239
           + II+Q+L+GL+YLH KC+IIHTDIKPENVL+CVDE  ++ LA  ATEL + G KLPVS 
Sbjct: 232 KRIIKQVLEGLDYLHNKCKIIHTDIKPENVLVCVDEIYIRKLACEATELHSMGAKLPVSL 291

Query: 240 CSTAPVQEYSELS--RRMSKNKKKKLKKKAKKENEMLMKQMKQ 280
            STAP +E+ E +   +MSKNKKKKLKKKAK++NE+L KQM+Q
Sbjct: 292 ISTAP-KEFQEPTPNSKMSKNKKKKLKKKAKRQNELLRKQMEQ 333

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853273|ref|XP_003702147.1| PREDICTED: SRSF protein kinase 3-like [Megachile rotundata]

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 172/274 (62%), Positives = 208/274 (75%), Gaps = 16/274 (5%)

Query: 18  YHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNR 77
           Y +   NR +  +S S+E+    E++++ +SS+++EQED  DYCKGGYHPVKIG LF NR
Sbjct: 245 YSSDNGNRLEPCHSSSNETI---EDDDEVYSSEDEEQEDSTDYCKGGYHPVKIGDLFLNR 301

Query: 78  YRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           Y VTRKLGWGHFSTVW         F   K  V  +  F ETALDEIKLLK VRD D +D
Sbjct: 302 YHVTRKLGWGHFSTVWLCWDLQDKRFVALKV-VKSASHFTETALDEIKLLKDVRDTDPSD 360

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
           P R + VQLL+DFKI G+NG HVCMVFEVLGHNLLKLI+KS YRGIP  NV+ IIRQ+L+
Sbjct: 361 PKRNKTVQLLNDFKISGINGLHVCMVFEVLGHNLLKLIIKSNYRGIPRNNVKRIIRQVLE 420

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEY 248
           GL+YLH KC+IIHTDIKPENVL+CVDEA ++ LA  ATEL + G KLPVS  STAP +E+
Sbjct: 421 GLDYLHNKCKIIHTDIKPENVLVCVDEAYIRKLACEATELHSLGMKLPVSLISTAP-KEF 479

Query: 249 SELS--RRMSKNKKKKLKKKAKKENEMLMKQMKQ 280
            E +   +MSKNKKKKLKKKAK++NE+L KQM+Q
Sbjct: 480 QEPTPNSKMSKNKKKKLKKKAKRQNELLKKQMEQ 513

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788991|ref|XP_001120563.2| PREDICTED: serine/threonine-protein kinase SRPK1-like [Apis mellifera]

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 172/274 (62%), Positives = 208/274 (75%), Gaps = 16/274 (5%)

Query: 18  YHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNR 77
           Y +   NR +  +S S+E+    E+ ++ +SS+++EQED +DYCKGGYHPVKIG LF NR
Sbjct: 67  YSSDNGNRLEPCHSSSNETM---EDGDEVYSSEDEEQEDSSDYCKGGYHPVKIGDLFLNR 123

Query: 78  YRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           Y VTRKLGWGHFSTVW         F   K  V  +  F ETALDEIKLLK VRD D +D
Sbjct: 124 YHVTRKLGWGHFSTVWLCWDLQDKRFVALKV-VKSASHFTETALDEIKLLKDVRDTDPSD 182

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
           P R + VQLL+DFKI G+NG HVCMVFEVLGHNLLKLI+KS YRGIP  NV+ IIRQ+L+
Sbjct: 183 PKRNKTVQLLNDFKISGINGLHVCMVFEVLGHNLLKLIIKSNYRGIPRNNVKRIIRQVLE 242

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEY 248
           GL+YLH KC+IIHTDIKPENVL+CVDEA ++ LA  ATEL + G KLPVS  STAP +E+
Sbjct: 243 GLDYLHNKCKIIHTDIKPENVLVCVDEAYIRKLACEATELHSLGMKLPVSLISTAP-KEF 301

Query: 249 SELS--RRMSKNKKKKLKKKAKKENEMLMKQMKQ 280
            E +   +MSKNKKKKLKKKAK++NE+L KQM+Q
Sbjct: 302 QEPTPNSKMSKNKKKKLKKKAKRQNELLKKQMEQ 335

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443707597|gb|ELU03110.1| hypothetical protein CAPTEDRAFT_173738 [Capitella teleta]

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 9/242 (3%)

Query: 47  FSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS-------KT 99
             SD+DEQEDP DY KGGYHPVKIG +FN +YRV RKLGWGHFSTVW             
Sbjct: 32  LGSDDDEQEDPKDYVKGGYHPVKIGDVFNKKYRVIRKLGWGHFSTVWLCWDLDDKRFVAL 91

Query: 100 QVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL 158
           +V+ S Q + ETA+DE KLL+CVR+ +  +P+RE+VVQLLDDFK+ G NGTHV MVFEVL
Sbjct: 92  KVVKSAQHYTETAVDECKLLRCVREAEEANPFREKVVQLLDDFKVSGANGTHVAMVFEVL 151

Query: 159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV 218
           GHNLLKLI++S Y+GIP++NVRSIIRQ LQGL+YLH+KC+IIHTDIKPEN+LLCV +  +
Sbjct: 152 GHNLLKLIIRSNYQGIPIQNVRSIIRQTLQGLHYLHSKCKIIHTDIKPENILLCVTDDHI 211

Query: 219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMSKNKKKKLKKKAKKENEMLMKQM 278
           + LA +A E    G KLP S  STAP +E +  + ++SKNK+K+L++K K++  +L KQM
Sbjct: 212 RKLATDAVEWQKLGMKLPGSAVSTAP-KEKAAPTGKLSKNKRKRLRQKMKRQQVLLDKQM 270

Query: 279 KQ 280
           +Q
Sbjct: 271 QQ 272

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|380018109|ref|XP_003692978.1| PREDICTED: LOW QUALITY PROTEIN: SRSF protein kinase 1-like [Apis florea]

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 172/274 (62%), Positives = 207/274 (75%), Gaps = 16/274 (5%)

Query: 18  YHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNR 77
           Y +   NR +  +S S+E+    E+ ++ +SS+++EQED +DYCKGGYHPVKIG LF NR
Sbjct: 67  YSSDNGNRLEPCHSSSNETM---EDGDEVYSSEDEEQEDSSDYCKGGYHPVKIGDLFLNR 123

Query: 78  YRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           Y VTRKLGWGHFSTVW         F   K  V  +  F ETALDEIKLLK VRD D  D
Sbjct: 124 YHVTRKLGWGHFSTVWLCWDLQDKRFVALKV-VKSASHFTETALDEIKLLKDVRDTDPGD 182

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
           P R + VQLL+DFKI G+NG HVCMVFEVLGHNLLKLI+KS YRGIP  NV+ IIRQ+L+
Sbjct: 183 PKRNKTVQLLNDFKISGINGLHVCMVFEVLGHNLLKLIIKSNYRGIPRNNVKRIIRQVLE 242

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEY 248
           GL+YLH KC+IIHTDIKPENVL+CVDEA ++ LA  ATEL + G KLPVS  STAP +E+
Sbjct: 243 GLDYLHNKCKIIHTDIKPENVLVCVDEAYIRKLACEATELHSLGMKLPVSLISTAP-KEF 301

Query: 249 SELS--RRMSKNKKKKLKKKAKKENEMLMKQMKQ 280
            E +   +MSKNKKKKLKKKAK++NE+L KQM+Q
Sbjct: 302 QEPTPNSKMSKNKKKKLKKKAKRQNELLKKQMEQ 335

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406251|ref|XP_003487708.1| PREDICTED: serine/threonine-protein kinase SRPK3-like [Bombus impatiens]

 Score =  300 bits (767), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 172/274 (62%), Positives = 208/274 (75%), Gaps = 16/274 (5%)

Query: 18  YHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNR 77
           Y +   NR +  +S S+E+    E+ ++ +SS+++EQED +DYCKGGYHPVKIG LF NR
Sbjct: 67  YSSDNGNRLEPCHSSSNETM---EDGDEVYSSEDEEQEDSSDYCKGGYHPVKIGDLFLNR 123

Query: 78  YRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           Y VTRKLGWGHFSTVW         F   K  V  +  F ETALDEIKLLK VRD D +D
Sbjct: 124 YHVTRKLGWGHFSTVWLCWDLQDKRFVALKV-VKSASHFTETALDEIKLLKDVRDIDPSD 182

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
           P R + VQLL+DFKI G+NG HVCMVFEVLGHNLLKLI+KS YRGIP  NV+ IIRQ+L+
Sbjct: 183 PKRNKTVQLLNDFKISGINGLHVCMVFEVLGHNLLKLIIKSNYRGIPRNNVKRIIRQVLE 242

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEY 248
           GL+YLH KC+IIHTDIKPENVL+CVDEA ++ LA  ATEL + G KLPVS  STAP +E+
Sbjct: 243 GLDYLHNKCKIIHTDIKPENVLVCVDEAYIRKLACEATELHSLGMKLPVSLISTAP-KEF 301

Query: 249 SELS--RRMSKNKKKKLKKKAKKENEMLMKQMKQ 280
            E +   +MSKNKKKKLKKKAK++NE+L KQM+Q
Sbjct: 302 QEPTPNSKMSKNKKKKLKKKAKRQNELLKKQMEQ 335

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716349|ref|XP_003396661.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase SRPK1-like [Bombus terrestris]

 Score =  300 bits (767), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 172/274 (62%), Positives = 208/274 (75%), Gaps = 16/274 (5%)

Query: 18  YHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNR 77
           Y +   NR +  +S S+E+    E+ ++ +SS+++EQED +DYCKGGYHPVKIG LF NR
Sbjct: 67  YSSDNGNRLEPCHSSSNETM---EDGDEVYSSEDEEQEDSSDYCKGGYHPVKIGDLFLNR 123

Query: 78  YRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           Y VTRKLGWGHFSTVW         F   K  V  +  F ETALDEIKLLK VRD D +D
Sbjct: 124 YHVTRKLGWGHFSTVWLCWDLQDKRFVALKV-VKSASHFTETALDEIKLLKDVRDIDPSD 182

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
           P R + VQLL+DFKI G+NG HVCMVFEVLGHNLLKLI+KS YRGIP  NV+ IIRQ+L+
Sbjct: 183 PKRNKTVQLLNDFKISGINGLHVCMVFEVLGHNLLKLIIKSNYRGIPRNNVKRIIRQVLE 242

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEY 248
           GL+YLH KC+IIHTDIKPENVL+CVDEA ++ LA  ATEL + G KLPVS  STAP +E+
Sbjct: 243 GLDYLHNKCKIIHTDIKPENVLVCVDEAYIRKLACEATELHSLGMKLPVSLISTAP-KEF 301

Query: 249 SELS--RRMSKNKKKKLKKKAKKENEMLMKQMKQ 280
            E +   +MSKNKKKKLKKKAK++NE+L KQM+Q
Sbjct: 302 QEPTPNSKMSKNKKKKLKKKAKRQNELLKKQMEQ 335

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798702|gb|EFZ20300.1| hypothetical protein SINV_03865 [Solenopsis invicta]

 Score =  297 bits (761), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 166/256 (64%), Positives = 197/256 (76%), Gaps = 13/256 (5%)

Query: 36  SHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW-- 93
           S +E   ++  FS++++EQED +DYCKGGYHPVKIG LF NRY VTRKLGWGHFSTVW  
Sbjct: 106 SSNETIEDDDAFSTEDEEQEDSSDYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLC 165

Query: 94  -------FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV 146
                  F   K  V  +  F ETALDEIKLLK VRD D NDP R + VQLL+DFKI G+
Sbjct: 166 WDLQDKRFVALKI-VKSASHFTETALDEIKLLKDVRDTDPNDPKRNKTVQLLNDFKISGI 224

Query: 147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP 206
           NG HVCMVFEVLGHNLLKLI+KS YRGIP  NV+ +IRQ+L+GL+YLH KC+IIHTDIKP
Sbjct: 225 NGLHVCMVFEVLGHNLLKLIIKSNYRGIPRNNVKRVIRQVLEGLDYLHNKCKIIHTDIKP 284

Query: 207 ENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSE--LSRRMSKNKKKKLK 264
           ENVL+CVDE  ++ LA  ATEL + G KLPVS  STAP +E+ E   + +MSKNKKKKLK
Sbjct: 285 ENVLVCVDETYIRKLACEATELHSMGAKLPVSLISTAP-KEFQEPIPNSKMSKNKKKKLK 343

Query: 265 KKAKKENEMLMKQMKQ 280
           KKAK++NE+L KQM+Q
Sbjct: 344 KKAKRQNELLKKQMEQ 359

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235234|ref|XP_001812254.1| PREDICTED: similar to AGAP005322-PA [Tribolium castaneum] gi|270003734|gb|EFA00182.1| hypothetical protein TcasGA2_TC003007 [Tribolium castaneum]

 Score =  297 bits (760), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 168/277 (60%), Positives = 207/277 (74%), Gaps = 17/277 (6%)

Query: 15  EYNYH--NKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGM 72
           E N H  N+ N++ +  +S S+E+    E+++  ++S+E+EQED NDY KGGYHPVKIG 
Sbjct: 31  EMNGHGENRINSKTEPSHSSSNETI---EDQDDPYTSEEEEQEDSNDYRKGGYHPVKIGD 87

Query: 73  LFNNRYRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQFPETALDEIKLLKCVRD 123
           LF NRY VTRKLGWGHFSTVW         F   K  V  +  F ETALDEIK+LK VR+
Sbjct: 88  LFLNRYHVTRKLGWGHFSTVWLCWDLQDRRFVALKI-VKSAEHFTETALDEIKILKAVRE 146

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
            D  DP R + VQLL+DFKI G+NG HVCMVFEVLGH+LLKLI+KS YRGIPL+NVR+I+
Sbjct: 147 SDPTDPKRNKTVQLLNDFKISGINGVHVCMVFEVLGHHLLKLIIKSNYRGIPLDNVRTIM 206

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTA 243
           RQ+L+GL+YLHTKC+IIHTDIKPENVL+CV E  ++ LA  A E+   G KLP S  STA
Sbjct: 207 RQVLEGLDYLHTKCKIIHTDIKPENVLICVSEEYIRRLACEAAEMHHLGLKLPTSLISTA 266

Query: 244 PVQEYSELSRRMSKNKKKKLKKKAKKENEMLMKQMKQ 280
           PVQE    + +MSKNKKKKLKKKAK+ NE+L +QM+Q
Sbjct: 267 PVQEVQ--ASKMSKNKKKKLKKKAKRLNELLKRQMEQ 301

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	284
UNIPROTKB|E1BR48	648	SRPK2 "Uncharacterized protein	0.700	0.307	0.629	9.4e-66
UNIPROTKB|E1BR50	569	SRPK2 "Uncharacterized protein	0.700	0.349	0.629	9.4e-66
UNIPROTKB|F1ND58	688	SRPK2 "Uncharacterized protein	0.700	0.289	0.629	9.4e-66
ZFIN|ZDB-GENE-070112-2292	658	srpk1b "serine/arginine-rich p	0.721	0.311	0.632	2e-65
UNIPROTKB|P78362	688	SRPK2 "SRSF protein kinase 2"	0.700	0.289	0.625	4.1e-65
MGI|MGI:1201408	681	Srpk2 "serine/arginine-rich pr	0.700	0.292	0.625	4.1e-65
UNIPROTKB|E2QTT3	686	SRPK2 "Uncharacterized protein	0.700	0.290	0.625	5.2e-65
UNIPROTKB|F1PR36	677	SRPK2 "Uncharacterized protein	0.700	0.293	0.625	5.2e-65
UNIPROTKB|F6UQU0	659	SRPK2 "Uncharacterized protein	0.700	0.301	0.625	5.2e-65
UNIPROTKB|E1C5I9	661	SRPK1 "Uncharacterized protein	0.690	0.296	0.639	6.7e-65

UNIPROTKB|E1BR48 SRPK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 131/208 (62%), Positives = 157/208 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    50 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 109

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S Q + ETALDEIKLLKCVR+ D NDP ++ VVQL+DDFKI G+NG HVCMVFEVLGH
Sbjct:   110 VKSAQHYTETALDEIKLLKCVRESDPNDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH 169

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V+ 
Sbjct:   170 HLLKWIIKSNYQGLPIRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRR 229

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
                        G   P  S  STAP Q+
Sbjct:   230 MAAEATEWQKAGAPPPSGSAVSTAPQQK 257

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1BR50 SRPK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 131/208 (62%), Positives = 157/208 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    50 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 109

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S Q + ETALDEIKLLKCVR+ D NDP ++ VVQL+DDFKI G+NG HVCMVFEVLGH
Sbjct:   110 VKSAQHYTETALDEIKLLKCVRESDPNDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH 169

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V+ 
Sbjct:   170 HLLKWIIKSNYQGLPIRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRR 229

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
                        G   P  S  STAP Q+
Sbjct:   230 MAAEATEWQKAGAPPPSGSAVSTAPQQK 257

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1ND58 SRPK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 131/208 (62%), Positives = 157/208 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    50 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 109

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S Q + ETALDEIKLLKCVR+ D NDP ++ VVQL+DDFKI G+NG HVCMVFEVLGH
Sbjct:   110 VKSAQHYTETALDEIKLLKCVRESDPNDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH 169

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V+ 
Sbjct:   170 HLLKWIIKSNYQGLPIRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRR 229

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
                        G   P  S  STAP Q+
Sbjct:   230 MAAEATEWQKAGAPPPSGSAVSTAPQQK 257

GO:0000245 "spliceosomal complex assembly" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=IEA

GO:0035063 "nuclear speck organization" evidence=IEA

GO:0043525 "positive regulation of neuron apoptotic process" evidence=IEA

GO:0045070 "positive regulation of viral genome replication" evidence=IEA

GO:0045071 "negative regulation of viral genome replication" evidence=IEA

GO:0045787 "positive regulation of cell cycle" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

ZFIN|ZDB-GENE-070112-2292 srpk1b "serine/arginine-rich protein specific kinase 1b" [Danio rerio (taxid:7955)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 136/215 (63%), Positives = 162/215 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDPNDYCKGGYH VKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    66 SDDEEQEDPNDYCKGGYHHVKIGDLFNGRYHVIRKLGWGHFSTVWLAWDTQGKRFVAMKV 125

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S + + ETALDEIKLLK VR+ D NDP RE+VVQLLDDFKI GVNGTHVCMVFEVLGH
Sbjct:   126 VKSAEHYTETALDEIKLLKAVRNTDQNDPSREKVVQLLDDFKISGVNGTHVCMVFEVLGH 185

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+PL  V+SIIRQ+LQGL+YLHTKC+IIHTDIKPEN+L+ V+EA VK 
Sbjct:   186 HLLKWIIKSNYQGLPLPCVKSIIRQVLQGLDYLHTKCKIIHTDIKPENILMDVNEAYVKR 245

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPV-QEYSELSR 253
                        G   P  S  STAP  ++ +++S+
Sbjct:   246 LAAEATEWQKSGAPPPSGSAVSTAPAPKQATKMSK 280

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

UNIPROTKB|P78362 SRPK2 "SRSF protein kinase 2" [Homo sapiens (taxid:9606)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 130/208 (62%), Positives = 157/208 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    52 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 111

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S Q + ETALDEIKLLKCVR+ D +DP ++ VVQL+DDFKI G+NG HVCMVFEVLGH
Sbjct:   112 VKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH 171

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V+ 
Sbjct:   172 HLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRR 231

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
                        G   P  S  STAP Q+
Sbjct:   232 MAAEATEWQKAGAPPPSGSAVSTAPQQK 259

GO:0030154 "cell differentiation" evidence=IEA

GO:0008380 "RNA splicing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0000245 "spliceosomal complex assembly" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0048024 "regulation of mRNA splicing, via spliceosome" evidence=TAS

GO:0008284 "positive regulation of cell proliferation" evidence=IDA

GO:0045087 "innate immune response" evidence=IC

GO:0045071 "negative regulation of viral genome replication" evidence=IDA

GO:0045070 "positive regulation of viral genome replication" evidence=IDA

GO:0035063 "nuclear speck organization" evidence=ISS

GO:0001525 "angiogenesis" evidence=ISS

GO:0010628 "positive regulation of gene expression" evidence=ISS

GO:0043525 "positive regulation of neuron apoptotic process" evidence=ISS

GO:0045787 "positive regulation of cell cycle" evidence=ISS

GO:0071889 "14-3-3 protein binding" evidence=ISS

GO:0005730 "nucleolus" evidence=IDA

MGI|MGI:1201408 Srpk2 "serine/arginine-rich protein specific kinase 2" [Mus musculus (taxid:10090)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 130/208 (62%), Positives = 157/208 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    50 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 109

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S Q + ETALDEIKLLKCVR+ D +DP ++ VVQL+DDFKI G+NG HVCMVFEVLGH
Sbjct:   110 VKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH 169

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V+ 
Sbjct:   170 HLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRR 229

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
                        G   P  S  STAP Q+
Sbjct:   230 MAAEATEWQKAGAPPPSGSAVSTAPQQK 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000245 "spliceosomal complex assembly" evidence=ISO;IDA

GO:0000287 "magnesium ion binding" evidence=ISO;IDA

GO:0001525 "angiogenesis" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0006397 "mRNA processing" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;IDA

GO:0008284 "positive regulation of cell proliferation" evidence=ISO;IDA

GO:0008380 "RNA splicing" evidence=ISO;IDA

GO:0010628 "positive regulation of gene expression" evidence=IDA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0035063 "nuclear speck organization" evidence=IDA

GO:0043525 "positive regulation of neuron apoptotic process" evidence=IDA

GO:0045070 "positive regulation of viral genome replication" evidence=ISO

GO:0045071 "negative regulation of viral genome replication" evidence=ISO

GO:0045787 "positive regulation of cell cycle" evidence=IDA

GO:0071889 "14-3-3 protein binding" evidence=IDA

UNIPROTKB|E2QTT3 SRPK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 130/208 (62%), Positives = 156/208 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    50 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 109

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S Q + ETALDEIKLLKCVR+ D  DP ++ VVQL+DDFKI G+NG HVCMVFEVLGH
Sbjct:   110 VKSAQHYTETALDEIKLLKCVRESDPTDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH 169

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V+ 
Sbjct:   170 HLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRR 229

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
                        G   P  S  STAP Q+
Sbjct:   230 MAAEATEWQKAGAPPPSGSAVSTAPQQK 257

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1PR36 SRPK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 130/208 (62%), Positives = 156/208 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    41 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 100

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S Q + ETALDEIKLLKCVR+ D  DP ++ VVQL+DDFKI G+NG HVCMVFEVLGH
Sbjct:   101 VKSAQHYTETALDEIKLLKCVRESDPTDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH 160

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V+ 
Sbjct:   161 HLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRR 220

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
                        G   P  S  STAP Q+
Sbjct:   221 MAAEATEWQKAGAPPPSGSAVSTAPQQK 248

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F6UQU0 SRPK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 130/208 (62%), Positives = 156/208 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    50 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKV 109

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S Q + ETALDEIKLLKCVR+ D  DP ++ VVQL+DDFKI G+NG HVCMVFEVLGH
Sbjct:   110 VKSAQHYTETALDEIKLLKCVRESDPTDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH 169

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V+ 
Sbjct:   170 HLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRR 229

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
                        G   P  S  STAP Q+
Sbjct:   230 MAAEATEWQKAGAPPPSGSAVSTAPQQK 257

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E1C5I9 SRPK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
 Identities = 131/205 (63%), Positives = 154/205 (75%)

Query:    49 SDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQV 101
             SD+DEQEDPNDYCKGGYH VKIG LFN RY V RKLGWGHFSTVW      G +    +V
Sbjct:    51 SDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLAWDIQGKRFVAMKV 110

Query:   102 LVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH 160
             + S + + ETALDEIKLLK VR+ D NDP +ERVVQLLDDFKI GVNG+H+CMVFEVLGH
Sbjct:   111 VKSAEHYTETALDEIKLLKSVRNSDPNDPNKERVVQLLDDFKISGVNGSHICMVFEVLGH 170

Query:   161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKX 220
             +LLK I+KS Y+G+PL  V+ II+Q+LQGL+YLHTKCRIIHTDIKPEN+LLCV++  ++ 
Sbjct:   171 HLLKWIIKSNYQGLPLPCVKKIIKQVLQGLDYLHTKCRIIHTDIKPENILLCVNDQYIRR 230

Query:   221 XXXXXXXXXXXGHKLPV-SFCSTAP 244
                        G   P  S  STAP
Sbjct:   231 LAAEATEWQRSGAPPPSGSAVSTAP 255

GO:0007059 "chromosome segregation" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0045070 "positive regulation of viral genome replication" evidence=IEA

GO:0045071 "negative regulation of viral genome replication" evidence=IEA

GO:0050684 "regulation of mRNA processing" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RD27	SRPK1_PONAB	2, ., 7, ., 1, 1, ., 1	0.6481	0.7288	0.3160	yes	N/A
Q03563	SPK1_CAEEL	2, ., 7, ., 1, 1, ., 1	0.5432	0.7042	0.1994	yes	N/A
O54781	SRPK2_MOUSE	2, ., 7, ., 1, 1, ., 1	0.6363	0.7042	0.2936	yes	N/A
Q96SB4	SRPK1_HUMAN	2, ., 7, ., 1, 1, ., 1	0.6481	0.7288	0.3160	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	284
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-22
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-19
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-18
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-18
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-18
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-18
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-17
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-14
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-13
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-13
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-13
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-13
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-12
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-12
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-12
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-12
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-11
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-11
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-10
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	9e-10
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-09
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-09
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-09
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-09
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-09
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-09
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-09
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	3e-09
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	5e-09
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-09
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	9e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-08
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-08
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-08
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	8e-08
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	8e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	9e-08
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	9e-08
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-07
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-07
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-07
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-07
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-07
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-07
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-07
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-07
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	6e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	7e-07
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-06
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-06
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-06
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-06
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-06
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-06
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	5e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	6e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	7e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-05
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	1e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-05
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-05
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	5e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	6e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	6e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	6e-05
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	7e-05
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	7e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-04
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	4e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	4e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-04
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	7e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	7e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	7e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	8e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	8e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	9e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	9e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	0.001
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	0.001
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	0.001
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.002
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.002
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	0.002
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.002
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.002
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.002
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.003
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.003
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.003
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.004
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	0.004
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.004
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	0.004
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 93.4 bits (233), Expect = 1e-22
 Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 26/148 (17%)

Query: 78  YRVTRKLGWGHFSTVW---FTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVN 127
           Y +  KLG G F  V+      +   V +         +  E  L EIK+LK +      
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL-----K 55

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQI 186
            P    +V+L D F     +   + +V E     +L  L+ K     +  +  R  +RQI
Sbjct: 56  HPN---IVRLYDVF----EDEDKLYLVMEYCEGGDLFDLLKK--RGRLSEDEARFYLRQI 106

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           L  L YLH    I+H D+KPEN+LL  D
Sbjct: 107 LSALEYLH-SKGIVHRDLKPENILLDED 133

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 25/147 (17%)

Query: 84  LGWGHFSTVWF---TGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVNDPYRER 133
           LG G F TV+      +  +V +       S    E  L EI++LK +            
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH--------PN 52

Query: 134 VVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
           +V+L   F+    +  H+ +V E     +L  L+ K     +  + +  I+ QIL+GL Y
Sbjct: 53  IVKLYGVFE----DENHLYLVMEYCEGGSLKDLL-KENEGKLSEDEILRILLQILEGLEY 107

Query: 193 LHTKCRIIHTDIKPENVLLCVDEARVK 219
           LH    IIH D+KPEN+LL  D  +VK
Sbjct: 108 LH-SNGIIHRDLKPENILLDSDNGKVK 133

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 83.1 bits (206), Expect = 1e-18
 Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 25/145 (17%)

Query: 78  YRVTRKLGWGHFSTVWFTGSK-TQVLV----------SPQFPETALDEIKLLKCVRDGDV 126
           Y+   K+G G +  V+    K T  +V          S   P+TAL EIKLLK +     
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL----- 55

Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
           N P    +++LLD F+    +   + +VFE +  +L KLI K + RG+P   ++S + Q+
Sbjct: 56  NHPN---IIKLLDVFR----HKGDLYLVFEFMDTDLYKLI-KDRQRGLPESLIKSYLYQL 107

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLL 211
           LQGL + H    I+H D+KPEN+L+
Sbjct: 108 LQGLAFCH-SHGILHRDLKPENLLI 131

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 82.5 bits (205), Expect = 2e-18
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 14/105 (13%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            P TAL EI LLK     ++  P    +V+LLD           + +VFE    +L K +
Sbjct: 41  IPSTALREISLLK-----ELKHPN---IVKLLDVI----HTERKLYLVFEYCDMDLKKYL 88

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
              +   +    ++SI+ Q+L+GL Y H+  RI+H D+KP+N+L+
Sbjct: 89  -DKRPGPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILI 131

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 82.0 bits (203), Expect = 3e-18
 Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 16/110 (14%)

Query: 109 ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVK 168
           +TAL E+K+L+ +R         E +V L + F+  G     + +VFE +   LL+L+  
Sbjct: 45  KTALREVKVLRQLR--------HENIVNLKEAFRRKG----RLYLVFEYVERTLLELLEA 92

Query: 169 SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV 218
           S   G+P + VRS I Q+LQ + Y H+   IIH DIKPEN+L  V E+ V
Sbjct: 93  SPG-GLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENIL--VSESGV 138

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 80.7 bits (200), Expect = 8e-18
 Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 23/152 (15%)

Query: 78  YRVTRKLGWGHFSTVWFTGSK-TQVLVS--------PQFPE-TALDEIKLLKCVRDGDVN 127
           Y+V ++LG G F +V+   +K T  LV+          + E   L E+K L+ +      
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKL------ 54

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
                 +V+L + F+        +  VFE +  NL +L+   K +      +RSII QIL
Sbjct: 55  -NEHPNIVKLKEVFREND----ELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQIL 109

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           QGL ++H K    H D+KPEN LL      VK
Sbjct: 110 QGLAHIH-KHGFFHRDLKPEN-LLVSGPEVVK 139

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 80.0 bits (198), Expect = 1e-17
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 27/149 (18%)

Query: 78  YRVTRKLGWGHFSTVWF-TGSKTQVLV----------SPQFPETALDEIKLLKCVRDGDV 126
           Y + RKLG G F TV+      T  +V            +  +TA  EI++L+ +     
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLS---- 56

Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQ 185
                  +V+L+D F     +  H+ +V E     +L   + +     +  +  + I  Q
Sbjct: 57  ----HPNIVRLIDAF----EDKDHLYLVMEYCEGGDLFDYLSR--GGPLSEDEAKKIALQ 106

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           IL+GL YLH    IIH D+KPEN+LL  +
Sbjct: 107 ILRGLEYLH-SNGIIHRDLKPENILLDEN 134

Length = 260

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 70.4 bits (173), Expect = 5e-14
 Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 33/154 (21%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKTQVLVSPQ---------------FPETALDEIKLLKCV 121
           RY++  ++G G    V     K +   + +                P  AL EIK L+  
Sbjct: 1   RYKILGRIGEGAHGIV----FKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQ-- 54

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRS 181
                  PY   VV+LLD F     +G+   +V E +  +L +++ + + R +P   V+S
Sbjct: 55  ---ACQHPY---VVKLLDVFP----HGSGFVLVMEYMPSDLSEVL-RDEERPLPEAQVKS 103

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
            +R +L+G+ Y+H    I+H D+KP N+L+  D 
Sbjct: 104 YMRMLLKGVAYMH-ANGIMHRDLKPANLLISADG 136

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 69.8 bits (169), Expect = 1e-13
 Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 21/152 (13%)

Query: 78  YRVTRKLGWGHFSTVWFTGSKTQVLV---------SPQFPETALDEIKLLKCVRDGDVND 128
           YR+ RKLG G F  V+    +  V +           +  E  L EI++L       +N 
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILA-----SLNH 56

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRG-IPLENVRSIIRQIL 187
           P    +V+L D F+     G+   ++  V G +L  L+ K   +G +       I+ QIL
Sbjct: 57  P--PNIVKLYDFFQ---DEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQIL 111

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
             L YLH+K  IIH DIKPEN+LL  D   VK
Sbjct: 112 SALEYLHSK-GIIHRDIKPENILLDRDGRVVK 142

Length = 384

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 68.8 bits (169), Expect = 2e-13
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 13/107 (12%)

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV----NGTHVCMVFEVLGHNLL 163
           P + L EI LLK +       P    +V+LLD   +C          + +VFE +  +L 
Sbjct: 42  PLSTLREIALLKQLES--FEHPN---IVRLLD---VCHGPRTDRELKLTLVFEHVDQDLA 93

Query: 164 KLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
             + K    G+P E ++ ++RQ+L+G+++LH+  RI+H D+KP+N+L
Sbjct: 94  TYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNIL 139

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 67.6 bits (166), Expect = 5e-13
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 12/105 (11%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
           FP TA+ EIKLL+ +R           +V+L +     G    +  MVFE + H+L  L+
Sbjct: 41  FPITAIREIKLLQKLR--------HPNIVRLKEIVTSKGKGSIY--MVFEYMDHDLTGLL 90

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
              + +      ++  ++Q+L+GL YLH+   I+H DIK  N+L+
Sbjct: 91  DSPEVK-FTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILI 133

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 67.2 bits (165), Expect = 5e-13
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 28/149 (18%)

Query: 77  RYRVTRKLGWGHFSTVWF---TGSKTQVLV----SPQFPE-------TALDEIKLLKCVR 122
           RY   +KLG G ++ V+      +   V +      +  E       TAL EIKLL+ ++
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSI 182
                      ++ LLD F     + +++ +VFE +  +L K+I K K   +   +++S 
Sbjct: 61  H--------PNIIGLLDVF----GHKSNINLVFEFMETDLEKVI-KDKSIVLTPADIKSY 107

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +   L+GL YLH    I+H D+KP N+L+
Sbjct: 108 MLMTLRGLEYLH-SNWILHRDLKPNNLLI 135

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 65.2 bits (160), Expect = 2e-12
 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 27/150 (18%)

Query: 77  RYRVTRKLGWGHFSTVWF----TGSKTQVL-------VSPQFPETALDEIKLLKCVRDGD 125
           +Y + +++G G F  V+     +  K  VL       +S +  E AL+E+K+LK +    
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL---- 56

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--ENVRSI 182
            N P    +++  + F         +C+V E   G +L + I K K  G P   E +   
Sbjct: 57  -NHPN---IIKYYESF----EEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDW 108

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
             Q+   L YLH++ +I+H DIKP+N+ L 
Sbjct: 109 FVQLCLALKYLHSR-KILHRDIKPQNIFLT 137

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 13/104 (12%)

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK +   ++        V+LLD       +   + +VFE L  +L K + 
Sbjct: 42  PSTAIREISLLKELNHPNI--------VRLLDVVH----SENKLYLVFEFLDLDLKKYMD 89

Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            S   G+    ++S + Q+LQG+ Y H+  R++H D+KP+N+L+
Sbjct: 90  SSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLI 132

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 65.4 bits (159), Expect = 2e-12
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 32/154 (20%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKTQVLVSPQF---------------PETALDEIKLLKCV 121
           +Y    ++G G + TV+    K +   S  F               P + + E+ LLK +
Sbjct: 1   QYEPVAEIGVGAYGTVY----KARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRL 56

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGT----HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
              D        +V+L+D   +C  + T     V +VFE +  +L   + K    G+P E
Sbjct: 57  EAFD-----HPNIVRLMD---VCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAE 108

Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            ++ ++RQ L+GL++LH  C I+H D+KPEN+L+
Sbjct: 109 TIKDLMRQFLRGLDFLHANC-IVHRDLKPENILV 141

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 64.8 bits (158), Expect = 4e-12
 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 13/104 (12%)

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 43  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 90

Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+
Sbjct: 91  ASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLI 133

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 25/147 (17%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKT--------QVLVSPQFPETA---LDEIKLLKCVRDGD 125
            +     LG G F +V+    K          V +S    E       EI++L       
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILS-----S 55

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIR 184
           +  P    +V+     +        + +  E V G +L  L+   K+  +P   +R   R
Sbjct: 56  LQHPN---IVRYYGSERD--EEKNTLNIFLEYVSGGSLSSLL--KKFGKLPEPVIRKYTR 108

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           QIL+GL YLH+   I+H DIK  N+L+
Sbjct: 109 QILEGLAYLHSN-GIVHRDIKGANILV 134

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 62.2 bits (152), Expect = 3e-11
 Identities = 49/147 (33%), Positives = 64/147 (43%), Gaps = 31/147 (21%)

Query: 79  RVTRKLGWGHFSTVWF-----TGS-----KTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
              + LG G    V+      TG      K  V    +F +  L E+K L+         
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLR-----SCES 58

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEV--LG--HNLLKLIVKSKYRGIPLENVRSIIR 184
           PY   VV+    F      G  + +V E    G   +LLK     K   IP   +  I R
Sbjct: 59  PY---VVKCYGAFY---KEGE-ISIVLEYMDGGSLADLLK-----KVGKIPEPVLAYIAR 106

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           QIL+GL+YLHTK  IIH DIKP N+L+
Sbjct: 107 QILKGLDYLHTKRHIIHRDIKPSNLLI 133

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 23/151 (15%)

Query: 78  YRVTRKLGWGHFSTVWFTGSK-TQVLV--------SPQFPETALDEIKLLKCVRDGDVND 128
           + +  K+G G F  V+    K T   V        S +  E  ++EI++LK         
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILK-----KCKH 56

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
           P    +V+    +    +    + +V E      LK ++KS  + +    +  + +++L+
Sbjct: 57  PN---IVKYYGSY----LKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLK 109

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           GL YLH+   IIH DIK  N+LL   +  VK
Sbjct: 110 GLEYLHSN-GIIHRDIKAANILL-TSDGEVK 138

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 59.1 bits (144), Expect = 4e-10
 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 41/156 (26%)

Query: 77  RYRVTRKLGWGHFSTVW-----FTGSK------TQVLVSPQFPETALDEIKLLKCVRDGD 125
           RY + + +G G +  V       TG K      + V       +  L EIKLL+ +R   
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRH-- 58

Query: 126 VNDPYRERVVQLLD--------DFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
                 E ++ LLD        DF         V +V E++  +L K+I        PL 
Sbjct: 59  ------ENIIGLLDILRPPSPEDFN-------DVYIVTELMETDLHKVI----KSPQPLT 101

Query: 178 N--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +  ++  + QIL+GL YLH+   +IH D+KP N+L+
Sbjct: 102 DDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILV 136

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 58.3 bits (141), Expect = 9e-10
 Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 35/205 (17%)

Query: 20  NKYNNRYDNDYSLSDESHDEEENENK-QFSSDEDEQEDPNDYCKGGYHPVK---IGMLFN 75
           +   +++D+     DE  D ++  +   + +DE+      D C+             +  
Sbjct: 36  DTTGDKFDDC----DELGDSDDVTHATDYDADEESLSPQTDVCQEPCETTSSSDPASVVR 91

Query: 76  NRYRVTRKL-----GWGHFSTVWFTGSKTQVLVSP----QFPETALDEIKLLKCVRDGDV 126
            +Y +   L     G     T      + +V+V      + P     EI +LK +     
Sbjct: 92  MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGR---EIDILKTIS---- 144

Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
                  ++ L+  ++      + VCMV      +L   + +S    +PLE   +I R++
Sbjct: 145 ----HRAIINLIHAYR----WKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRL 194

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLL 211
           L+ L YLH +  IIH D+K EN+ L
Sbjct: 195 LEALAYLHGR-GIIHRDVKTENIFL 218

Length = 392

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 58.3 bits (141), Expect = 1e-09
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 30/187 (16%)

Query: 33  SDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVK-----IGMLFNNRYRVTRKLGWG 87
           SD S  + E  +   +S+ D+ +D       G  P K     +       Y V + L  G
Sbjct: 26  SDISDGDLEYSDDDSASESDDDDD------DGLIPTKQKAREVVASLG--YTVIKTLTPG 77

Query: 88  HFSTVWFT---GSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC 144
               V+     G    V++      T L E  LL+     +VN P    V+++ D     
Sbjct: 78  SEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQ-----NVNHP---SVIRMKDTL--- 126

Query: 145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI 204
            V+G   CMV      +L   + K + R +P++    I +QIL+GL YLH + RIIH D+
Sbjct: 127 -VSGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDV 183

Query: 205 KPENVLL 211
           K EN+ +
Sbjct: 184 KTENIFI 190

Length = 357

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 16/108 (14%)

Query: 105 PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLK 164
           P   + AL EI++LK ++  ++        V L++ F+        + +VFE   H +L 
Sbjct: 41  PVIKKIALREIRMLKQLKHPNL--------VNLIEVFR----RKRKLHLVFEYCDHTVLN 88

Query: 165 LIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLL 211
            + K+  RG+P   ++ II Q LQ +N+ H   C  IH D+KPEN+L+
Sbjct: 89  ELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNC--IHRDVKPENILI 133

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 45/160 (28%), Positives = 66/160 (41%), Gaps = 43/160 (26%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKT--------QVLVSPQ---FPETALDEIKLLKCVRDG 124
             Y +  KLG G F  V+              ++L+  +   FP TAL EIK+LK ++  
Sbjct: 8   RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK-- 65

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTH----VCMVFEVLGHNLLKLIVKSKYRGIPLEN-- 178
                    VV L+D               V MV   + H+L  L          LEN  
Sbjct: 66  ------HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGL----------LENPS 109

Query: 179 -------VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                  ++  + Q+L+G+NYLH    I+H DIK  N+L+
Sbjct: 110 VKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILI 148

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 16/99 (16%)

Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYR 172
           EI LLK        +   E +VQ L       ++  H+ +  E V G ++  L+  + Y 
Sbjct: 56  EIALLK--------ELQHENIVQYLG----SSLDADHLNIFLEYVPGGSVAALL--NNYG 101

Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                 VR+ +RQIL+GLNYLH +  IIH DIK  N+L+
Sbjct: 102 AFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILV 139

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 18/110 (16%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC--MVFEVLGHNLLK 164
             ++A  EI LL+ ++         E VV L++ F    +        ++F+   H+L +
Sbjct: 45  ISQSACREIALLRELK--------HENVVSLVEVF----LEHADKSVYLLFDYAEHDLWQ 92

Query: 165 LI---VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +I    ++K   IP   V+S++ QIL G++YLH+   ++H D+KP N+L+
Sbjct: 93  IIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILV 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 151 VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
           +CM  E +    L  I+K     IP   +  I   +L+GL YLH K +IIH D+KP N+L
Sbjct: 76  ICM--EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNIL 133

Query: 211 L 211
           +
Sbjct: 134 V 134

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 26/151 (17%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF---TGSKTQVLV--------SPQFPETALDEIKLLKCVR 122
             +RY+    +G G +  V     T S  +V +         P   +  L E+K+L+  +
Sbjct: 3   VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK 62

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VR 180
                    + ++ + D  +  G +   V +V +++  +L  +I    +   PL    +R
Sbjct: 63  --------HDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHII----HSDQPLTEEHIR 110

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             + Q+L+GL Y+H+   +IH D+KP N+L+
Sbjct: 111 YFLYQLLRGLKYIHSAN-VIHRDLKPSNLLV 140

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 56.6 bits (136), Expect = 3e-09
 Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 8/82 (9%)

Query: 134 VVQLLDDFKICGVN----GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQG 189
           VV+L D   +C V+     T + +VFE +  +L   + K    G+P E ++ ++ Q+L+G
Sbjct: 66  VVRLFD---VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 122

Query: 190 LNYLHTKCRIIHTDIKPENVLL 211
           L++LH+  R++H D+KP+N+L+
Sbjct: 123 LDFLHSH-RVVHRDLKPQNILV 143

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 55.8 bits (134), Expect = 5e-09
 Identities = 36/107 (33%), Positives = 65/107 (60%), Gaps = 14/107 (13%)

Query: 109 ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVK 168
           ET L E+K+L+ ++        +E +V+L + F+  G     + +VFE +  N+L+L+ +
Sbjct: 45  ETTLRELKMLRTLK--------QENIVELKEAFRRRG----KLYLVFEYVEKNMLELL-E 91

Query: 169 SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
               G+P E VRS I Q+++ +++ H K  I+H DIKPEN+L+  ++
Sbjct: 92  EMPNGVPPEKVRSYIYQLIKAIHWCH-KNDIVHRDIKPENLLISHND 137

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 55.5 bits (134), Expect = 6e-09
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 31/154 (20%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSK-TQVLVSPQ----------FPETALDEIKLLKCVRDG 124
           ++Y    K+G G F  V+    K T+ +V+ +          FP TAL EIK+L+ ++  
Sbjct: 12  SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK-- 69

Query: 125 DVNDPYRERVVQLLDDFKICGVNGT-------HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
                  E VV L++   IC    T          +VFE   H+L  L+  +K     L 
Sbjct: 70  ------HENVVNLIE---ICRTKATPYNRYKGSFYLVFEFCEHDLAGLL-SNKNVKFTLS 119

Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            ++ +++ +L GL Y+H   +I+H D+K  N+L+
Sbjct: 120 EIKKVMKMLLNGLYYIHRN-KILHRDMKAANILI 152

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 54.7 bits (132), Expect = 9e-09
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 14/101 (13%)

Query: 111 ALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSK 170
           A+ EI++LK +R         E +V L++ F+        + +VFE + H +L  + K  
Sbjct: 47  AMREIRMLKQLR--------HENLVNLIEVFR----RKKRLYLVFEFVDHTVLDDLEKYP 94

Query: 171 YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             G+    VR  + QIL+G+ + H+   IIH DIKPEN+L+
Sbjct: 95  -NGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILV 133

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 35/151 (23%)

Query: 78  YRVTRKLGWGHFSTVWFTGSKTQVLVSPQF--------------PETALDEIKLLKCVRD 123
           Y++  K+G G FS V     K Q   + ++                  L EI+ L+ +  
Sbjct: 1   YKILGKIGEGTFSEVL----KAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRL-- 54

Query: 124 GDVNDPYRERVVQLLD---DFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVR 180
                     +++L++   D K     G  + +VFE++  NL +LI K + R +P + V+
Sbjct: 55  -----SPHPNILRLIEVLFDRK----TGR-LALVFELMDMNLYELI-KGRKRPLPEKRVK 103

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           S + Q+L+ L+++H +  I H DIKPEN+L+
Sbjct: 104 SYMYQLLKSLDHMH-RNGIFHRDIKPENILI 133

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 53.7 bits (130), Expect = 2e-08
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 32/147 (21%)

Query: 82  RKLGWGHFSTVWF-------TGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVN 127
           +KLG G F  V+         G + +V V       S Q  E  L E ++++ +      
Sbjct: 5   KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDH---- 60

Query: 128 DPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIR 184
                 +V+LL      GV      + +V E +   +LL  + K++ + + L ++ S   
Sbjct: 61  ----PNIVKLL------GVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFAL 110

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           QI +G+ YL +K   IH D+   N L+
Sbjct: 111 QIARGMEYLESK-NFIHRDLAARNCLV 136

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 53.3 bits (129), Expect = 2e-08
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 18/107 (16%)

Query: 119 KCVRDGDVNDPYRER----------VVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIV 167
           K ++  +V     ER          +V+L   F+        + +V E   G  L   + 
Sbjct: 30  KIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ----TEEKLYLVLEYAPGGELFSHL- 84

Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            SK      E  R    +I+  L YLH+   II+ D+KPEN+LL  D
Sbjct: 85  -SKEGRFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDAD 129

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 52.5 bits (127), Expect = 5e-08
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 33/147 (22%)

Query: 82  RKLGWGHFSTVW-----FTGSKTQVLV---------SPQFPETALDEIKLLKCVRDGDVN 127
           +KLG G F  V+       G K +V V         S Q  E  L E ++++ +      
Sbjct: 5   KKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDH---- 60

Query: 128 DPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIR 184
                 VV+LL      GV      + +V E +   +LL  + K++ + + L ++ S   
Sbjct: 61  ----PNVVKLL------GVCTEEEPLYIVMEYMEGGDLLSYLRKNRPK-LSLSDLLSFAL 109

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           QI +G+ YL +K   IH D+   N L+
Sbjct: 110 QIARGMEYLESK-NFIHRDLAARNCLV 135

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 52.6 bits (127), Expect = 5e-08
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 25/148 (16%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRER-- 133
           + ++  + +G G FSTV     K     + ++    LD+ +L+K   +  V     E+  
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKET---NKEYAIKILDKRQLIK---EKKVKYVKIEKEV 54

Query: 134 ---------VVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSII 183
                    +++L   F+    +  ++  V E   +  LL+ I   KY  +  +  R   
Sbjct: 55  LTRLNGHPGIIKLYYTFQ----DEENLYFVLEYAPNGELLQYI--RKYGSLDEKCTRFYA 108

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +IL  L YLH+K  IIH D+KPEN+LL
Sbjct: 109 AEILLALEYLHSK-GIIHRDLKPENILL 135

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 52.1 bits (125), Expect = 7e-08
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 25/149 (16%)

Query: 77  RYRVTRKLGWGHFSTVW----FTGSKTQVL-------VSPQFPETALDEIKLLKCVRDGD 125
            ++V +KLG G + +V+     + ++   L       +S +  E A++EI++L  V   +
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRG--IPLENVRSII 183
           +   Y+E     LD  K+C V      M +   G +L K I K K +   IP + +  I 
Sbjct: 61  IIS-YKE---AFLDGNKLCIV------MEYAPFG-DLSKAISKRKKKRKLIPEQEIWRIF 109

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLC 212
            Q+L+GL  LH + +I+H D+K  N+LL 
Sbjct: 110 IQLLRGLQALHEQ-KILHRDLKSANILLV 137

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 52.7 bits (126), Expect = 8e-08
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 21/146 (14%)

Query: 77  RYRVTRKLGWGHFSTV---WFTGSKTQVLVS-----PQFPETALDEIKLLKCVRDGDVND 128
           R+++   LG G F  V   W    K    V      P++   A  EI+ ++ VR  D  D
Sbjct: 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPAD 189

Query: 129 PYRERVVQLLDDFKICGVNGT-HVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRSIIRQ 185
             R  ++++   F+    N T H+C+V    G  LL  I+K      P  +  +  II Q
Sbjct: 190 --RFPLMKIQRYFQ----NETGHMCIVMPKYGPCLLDWIMKHG----PFSHRHLAQIIFQ 239

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
               L+Y HT+  ++HTD+KPEN+L+
Sbjct: 240 TGVALDYFHTELHLMHTDLKPENILM 265

Length = 467

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 14/106 (13%)

Query: 107 FPETALDEIK-LLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKL 165
           FP T+L EI  LLK      V    +E VV         G N   + MV E + H+L  L
Sbjct: 47  FPITSLREINILLKLQHPNIVT--VKEVVV---------GSNLDKIYMVMEYVEHDLKSL 95

Query: 166 IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +   K   +  E V+ ++ Q+L G+ +LH    I+H D+K  N+LL
Sbjct: 96  METMKQPFLQSE-VKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLL 139

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 51.7 bits (124), Expect = 9e-08
 Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 30/150 (20%)

Query: 76  NRYRVTRKLGWGHFSTVWF-----TG---SKTQVLVSPQFPET-----ALD-EIKLLKCV 121
             +R  + LG G F  V+      TG   +  QV   P  PET     AL+ EI+LLK +
Sbjct: 2   TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL 61

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV-R 180
           +         ER+VQ       C  +   + +  E +    +K  +K+   G   E V R
Sbjct: 62  Q--------HERIVQYYG----CLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTR 107

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
              RQIL+G+ YLH+   I+H DIK  N+L
Sbjct: 108 KYTRQILEGVEYLHSN-MIVHRDIKGANIL 136

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 51.9 bits (125), Expect = 9e-08
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 45/162 (27%)

Query: 76  NRYRVTRKLGWGHFSTVWF---TGSKTQVLV--------SPQFPETALDEIKLLKCVRDG 124
           +RY+    +G G +  V     T +  +V +        S    +    E++LLK +   
Sbjct: 15  DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD-- 72

Query: 125 DVNDPYRERVVQLLD---------DFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIP 175
                  E V+ LLD         DF         V +V  ++G +L   IVK +     
Sbjct: 73  ------HENVIGLLDVFTPASSLEDF-------QDVYLVTHLMGADLNN-IVKCQ----K 114

Query: 176 L--ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
           L  ++++ ++ QIL+GL Y+H+   IIH D+KP N  + V+E
Sbjct: 115 LSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSN--IAVNE 153

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 14/114 (12%)

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG-THVCMVFEVLGHNLLKLI 166
           P TAL EI LL+ + +      Y   +V+LLD   +   NG   + +VFE L  +L K +
Sbjct: 44  PPTALREISLLQMLSE----SIY---IVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFM 96

Query: 167 V---KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR 217
               +   R +P + ++S + Q+L+G+ + H K  ++H D+KP+N+L  VD+ +
Sbjct: 97  DSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH-KHGVMHRDLKPQNLL--VDKQK 147

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 59/171 (34%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALD----EIKLLKCVRD--GDVNDP- 129
           +Y + +KLG G +  VW                 A+D    E+  LK + D   +  D  
Sbjct: 8   KYEILQKLGKGAYGIVW----------------KAIDRRTKEVVALKKIFDAFRNATDAQ 51

Query: 130 --YRE-----------RVVQLLDDFKICGVNGTHVCMVFE--------VLGHNLLKLIVK 168
             +RE            +V+LL+  K    N   + +VFE        V+  N+L+ + K
Sbjct: 52  RTFREIMFLQELGDHPNIVKLLNVIK--AENDKDIYLVFEYMETDLHAVIRANILEDVHK 109

Query: 169 SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
                      R I+ Q+L+ L Y+H+   +IH D+KP N+LL  D  RVK
Sbjct: 110 -----------RYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSD-CRVK 147

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 18/107 (16%)

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNL---LK 164
           P TA+ EI LLK        +     +V L D      +  + + ++FE L  +L   L 
Sbjct: 43  PSTAIREISLLK--------ELQHPNIVCLQDVL----MQESRLYLIFEFLSMDLKKYLD 90

Query: 165 LIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            + K +Y  +  E V+S + QILQG+ + H++ R++H D+KP+N+L+
Sbjct: 91  SLPKGQY--MDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLI 134

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 8/107 (7%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLD--DFKICGVNGTHVCMVFEVLGHNLLK 164
           FP TA+ EIK+L+ +   ++ +  +E V    D  DFK    +     +VFE + H+L+ 
Sbjct: 49  FPITAIREIKILRQLNHRNIVN-LKEIVTDKQDALDFK---KDKGAFYLVFEYMDHDLMG 104

Query: 165 LIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           L+ +S       ++++S ++Q+L+GLNY H K   +H DIK  N+LL
Sbjct: 105 LL-ESGLVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILL 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 24/145 (16%)

Query: 78  YRVTRKLGWGHFSTVWFTGSK-TQVLVSPQ---------FPETALDEIKLLKCVRDGDVN 127
           ++   KLG G ++TV+   ++ T  +V+ +          P TA+ EI L+K ++     
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK----- 56

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI-VKSKYRGIPLENVRSIIRQI 186
               E +V+L D           + +VFE +  +L K +        +    V+S   Q+
Sbjct: 57  ---HENIVRLHDVIHT----ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQL 109

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLL 211
           L+G+ + H   R++H D+KP+N+L+
Sbjct: 110 LKGIAFCHEN-RVLHRDLKPQNLLI 133

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           +N  ++CM  E +    L  I K K   IP+E +  I   +++GL YL+   RI+H DIK
Sbjct: 73  LNENNICMCMEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIK 131

Query: 206 PENVLL 211
           P N+L+
Sbjct: 132 PSNILV 137

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 24/139 (17%)

Query: 83  KLGWGHFSTVWFTGSK-TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRE-RVVQLLDD 140
           KLG G ++TV+   SK T  LV       AL EI+L     + +   P+   R   LL D
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLV-------ALKEIRL-----EHEEGAPFTAIREASLLKD 59

Query: 141 FKICGVNGTH--------VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
            K   +   H        + +VFE L    LK  +     G+ + NVR  + Q+L+GL Y
Sbjct: 60  LKHANIVTLHDIIHTKKTLTLVFEYL-DTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAY 118

Query: 193 LHTKCRIIHTDIKPENVLL 211
            H + R++H D+KP+N+L+
Sbjct: 119 CHQR-RVLHRDLKPQNLLI 136

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIH 201
             G    ++ +V E L G +L  L+       +  +  R  I +I+  L YLH    IIH
Sbjct: 62  FQGKK--NLYLVMEYLPGGDLASLL--ENVGSLDEDVARIYIAEIVLALEYLH-SNGIIH 116

Query: 202 TDIKPENVLL 211
            D+KP+N+L+
Sbjct: 117 RDLKPDNILI 126

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 20/146 (13%)

Query: 78  YRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRER-VVQ 136
           + + R +G G F  V     +    +       A+  +   KCV  G V +   ER ++Q
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKM------FAMKYMNKQKCVEKGSVRNVLNERRILQ 55

Query: 137 LLDDFKICGV-----NGTHVCMVFEVLGHNLLK--LIVKSKYRGIPLENVRSIIRQILQG 189
            L+   +  +     +  ++ +V ++L    L+  L  K K+     E V+  I +I+  
Sbjct: 56  ELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSE---EQVKFWICEIVLA 112

Query: 190 LNYLHTKCRIIHTDIKPENVLLCVDE 215
           L YLH+K  IIH DIKP+N+LL  DE
Sbjct: 113 LEYLHSK-GIIHRDIKPDNILL--DE 135

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 12/104 (11%)

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P ++L EI LL  +R           +V+L +   + G +   + +V E    +L  L+ 
Sbjct: 50  PISSLREITLLLNLR--------HPNIVELKE--VVVGKHLDSIFLVMEYCEQDLASLL- 98

Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +         V+ ++ Q+L+GL YLH    IIH D+K  N+LL
Sbjct: 99  DNMPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLL 141

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 15/102 (14%)

Query: 110 TALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKS 169
           T L E+K++  ++         E ++ L+D +    V G  + +V +++  +L K +V  
Sbjct: 66  TTLRELKIMNEIK--------HENIMGLVDVY----VEGDFINLVMDIMASDLKK-VVDR 112

Query: 170 KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           K R +    V+ I+ QIL GLN LH K   +H D+ P N+ +
Sbjct: 113 KIR-LTESQVKCILLQILNGLNVLH-KWYFMHRDLSPANIFI 152

Length = 335

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 28/154 (18%)

Query: 76  NRYRVTRKLGWGHFSTVW----------FTGSKTQV--LVSPQFPETALDEIKLLKCVRD 123
             +++ +K+G G FS V+              K Q+  ++  +  +  L EI LLK    
Sbjct: 2   GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLK---- 57

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVK---SKYRGIPLENVR 180
             ++ P    V++ L  F    +    + +V E+     L  ++K    + R IP   + 
Sbjct: 58  -QLDHP---NVIKYLASF----IENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIW 109

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
               Q+   L ++H+K RI+H DIKP NV +   
Sbjct: 110 KYFVQLCSALEHMHSK-RIMHRDIKPANVFITAT 142

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHT 202
             + G+ + ++ E   G + L L+   K   +    +  I+R++L GL YLH +   IH 
Sbjct: 67  SFLKGSKLWIIMEYCGGGSCLDLL---KPGKLDETYIAFILREVLLGLEYLHEE-GKIHR 122

Query: 203 DIKPENVLL 211
           DIK  N+LL
Sbjct: 123 DIKAANILL 131

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 27/147 (18%)

Query: 77  RYRVTRKLGWGHFSTVW---------FTGSKTQVL--VSPQFPETALDEIKLLKCVRDGD 125
            Y++   +G G F  V+         F   K   L  +  +  ++ + EI LLK     +
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLK-----N 55

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIR 184
           +  P    +V+ +   +        + ++ E     +L ++I   K+   P   V   + 
Sbjct: 56  LKHPN---IVKYIGSIE----TSDSLYIILEYAENGSLRQII--KKFGPFPESLVAVYVY 106

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           Q+LQGL YLH +  +IH DIK  N+L 
Sbjct: 107 QVLQGLAYLHEQ-GVIHRDIKAANILT 132

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 32/150 (21%)

Query: 76  NRYRVTRKLGWGHFSTV-----WFTGSKTQV--LVSPQFPETALD-----EIKLLKCVRD 123
           NRY   + +G G F  V       TG    +  ++ P F    L      E+KLLK +R 
Sbjct: 10  NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKP-FSTPVLAKRTYRELKLLKHLR- 67

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRS 181
                   E ++ L D F I  +    +  V E+LG +L +L+  S+    PLE   ++ 
Sbjct: 68  -------HENIISLSDIF-ISPL--EDIYFVTELLGTDLHRLL-TSR----PLEKQFIQY 112

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            + QIL+GL Y+H+   ++H D+KP N+L+
Sbjct: 113 FLYQILRGLKYVHS-AGVVHRDLKPSNILI 141

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 48.7 bits (117), Expect = 1e-06
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 15/113 (13%)

Query: 100 QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL- 158
           ++ +  Q  E  ++EI ++K  +           +V   D + +    G  + +V E + 
Sbjct: 51  KMRLRKQNKELIINEILIMKDCKH--------PNIVDYYDSYLV----GDELWVVMEYMD 98

Query: 159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           G +L  +I ++  R +    +  + R++LQGL YLH++  +IH DIK +N+LL
Sbjct: 99  GGSLTDIITQNFVR-MNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILL 149

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 16/27 (59%), Positives = 23/27 (85%), Gaps = 1/27 (3%)

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLC 212
           +L+GL+YLH++ +IIH DIKP N+LL 
Sbjct: 114 VLKGLSYLHSR-KIIHRDIKPSNILLT 139

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           R +    +R    Q+L+GL YLH+   I+H DIKP N+ L
Sbjct: 94  RILDEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFL 132

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 48.1 bits (114), Expect = 2e-06
 Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 22/138 (15%)

Query: 83  KLGWGHFSTVWFTGSK-TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF 141
           KLG G ++TV+   SK T  LV       AL EI+L     +G      RE  V LL D 
Sbjct: 13  KLGEGTYATVYKGRSKLTDNLV-------ALKEIRLEH--EEGAPCTAIRE--VSLLKDL 61

Query: 142 KICGVNGTH--------VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           K   +   H        + +VFE L  +L K  +      I + NV+  + Q+L+GLNY 
Sbjct: 62  KHANIVTLHDIIHTEKSLTLVFEYLDKDL-KQYLDDCGNSINMHNVKLFLFQLLRGLNYC 120

Query: 194 HTKCRIIHTDIKPENVLL 211
           H + +++H D+KP+N+L+
Sbjct: 121 HRR-KVLHRDLKPQNLLI 137

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 40/180 (22%)

Query: 82  RKLGWGHFSTVW-------FTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVN 127
           +KLG G F  V+         G++T+V V       S +  E  L+E  ++K      ++
Sbjct: 5   KKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMK-----KLS 59

Query: 128 DPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
            P    +V+LL      GV   G  + +V E +    L   ++     + L+++  +  Q
Sbjct: 60  HPN---IVRLL------GVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQ 110

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK--------TLALNATELAATGHKLPV 237
           I +G+ YL +K   +H D+   N L+  +   VK         +  +       G KLP+
Sbjct: 111 IAKGMEYLESK-NFVHRDLAARNCLVT-ENLVVKISDFGLSRDIYEDDYYRKRGGGKLPI 168

Length = 258

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 22/149 (14%)

Query: 75  NNRYRVTRKLGWGHFSTVWFTGSK-TQVLVSPQFPETA--------LDEIKLLKCVRDGD 125
           N  + +  +LG G F  V+   +K T  L + +  ET         + EI++L       
Sbjct: 11  NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEIL-----AT 65

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
            N PY   +V+LL  F   G     + ++ E      +  I+    RG+    ++ I RQ
Sbjct: 66  CNHPY---IVKLLGAFYWDG----KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQ 118

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +L+ L YLH+  +IIH D+K  NVLL +D
Sbjct: 119 MLEALQYLHSM-KIIHRDLKAGNVLLTLD 146

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 47.1 bits (113), Expect = 3e-06
 Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 38/156 (24%)

Query: 82  RKLGWGHFSTVW------FTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVND 128
           +KLG G F  V+        G  T+V V       S +  +  L E +++K      +  
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMK-----KLGH 55

Query: 129 PYRERVVQLLDDFKICGV--NGTHVCMVFE-VLGHNLLKLIVKSKYRG-------IPLEN 178
           P    VV+LL      GV      + +V E + G +LL  + KS+          + L++
Sbjct: 56  PN---VVRLL------GVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKD 106

Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           + S   QI +G+ YL +K + +H D+   N L+  D
Sbjct: 107 LLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGED 141

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)

Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
           V+ IIRQ+++ LN LH K  IIH DIK ENVL
Sbjct: 111 VKKIIRQLVEALNDLH-KHNIIHNDIKLENVL 141

Length = 267

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 13/104 (12%)

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK ++ G++        V+L D       +   + +VFE L  +L K + 
Sbjct: 45  PSTAIREISLLKEMQHGNI--------VRLQDVVH----SEKRLYLVFEYLDLDLKKHMD 92

Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            S         +++ + QIL+G+ Y H+  R++H D+KP+N+L+
Sbjct: 93  SSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLI 135

Length = 294

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 47.6 bits (113), Expect = 3e-06
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 31/154 (20%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TGSKTQV------LVSPQFPETALDEIKLLKCVRDGD 125
           RYR  +++G G + TV       TG+K  +        S  F + A  E++LLK ++   
Sbjct: 16  RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK--- 72

Query: 126 VNDPYRERVVQLLD----DFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRS 181
                 E V+ LLD    D  +   +  ++ M F  +G +L KL+   K+  +  + ++ 
Sbjct: 73  -----HENVIGLLDVFTPDLSLDRFHDFYLVMPF--MGTDLGKLM---KHEKLSEDRIQF 122

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
           ++ Q+L+GL Y+H    IIH D+KP N  L V+E
Sbjct: 123 LVYQMLKGLKYIHA-AGIIHRDLKPGN--LAVNE 153

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 24/154 (15%)

Query: 109 ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIV 167
           E A+DE ++L       ++  Y   +++  + F    ++   + +V E     +L KL+ 
Sbjct: 44  EEAIDEARVL-----AKLDSSY---IIRYYESF----LDKGKLNIVMEYAENGDLHKLLK 91

Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL-CVDEARV------KT 220
             + R +P + V     QIL GL +LH+K +I+H DIK  N+ L   D  ++      K 
Sbjct: 92  MQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKL 150

Query: 221 LALN---ATELAATGHKLPVSFCSTAPVQEYSEL 251
           L+ N   A  +  T + L    C   P  E S++
Sbjct: 151 LSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDV 184

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 6/64 (9%)

Query: 151 VCMVFEVLGHNLLKLI--VKSKYRGIPLENVRSIIR-QILQGLNYLHTKCRIIHTDIKPE 207
           +CM  EV+  +L K    V  K   IP E++   I   I++ L YLH+K  +IH D+KP 
Sbjct: 77  ICM--EVMDTSLDKFYKKVYDKGLTIP-EDILGKIAVSIVKALEYLHSKLSVIHRDVKPS 133

Query: 208 NVLL 211
           NVL+
Sbjct: 134 NVLI 137

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           I+R+ L+GL YLH   ++IH DIK +N+LL    A VK
Sbjct: 118 ILRETLRGLAYLHEN-KVIHRDIKGQNILL-TKNAEVK 153

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 46.3 bits (110), Expect = 6e-06
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 26/105 (24%)

Query: 123 DGDVNDPYRERVVQLLDDFKI-----------CGVNGTHVCMVFEVL-GHNLLKLI---- 166
           D DV+D  RE  V LL   +              + G  + ++ E   G ++  L+    
Sbjct: 40  DDDVSDIQRE--VALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGP 97

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +  KY  +       IIR++L  L Y+H K  +IH DIK  N+L+
Sbjct: 98  IAEKYISV-------IIREVLVALKYIH-KVGVIHRDIKAANILV 134

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 46.1 bits (110), Expect = 7e-06
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 166 IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           I+K   + +  E + +I+ Q L+GL YLH+  + IH DIK  N+LL
Sbjct: 88  IMKITNKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILL 132

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 7/64 (10%)

Query: 150 HVCMVFEVLGHNLLKLIVKSKYRGIPL--ENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
            + +V E++  +L K+IV  +    PL  ++V+  + QIL+GL YLH+   I+H DIKP 
Sbjct: 78  EIYVVTELMQSDLHKIIVSPQ----PLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPG 132

Query: 208 NVLL 211
           N+L+
Sbjct: 133 NLLV 136

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 6/52 (11%)

Query: 160 HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             LLK     KY   P   +R   RQIL GL YLH +   +H DIK  N+L+
Sbjct: 90  AKLLK-----KYGSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILV 135

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 22/138 (15%)

Query: 83  KLGWGHFSTVWFTGSK-TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF 141
           KLG G ++TV+   SK T+ LV       AL EI+L     +G      RE  V LL D 
Sbjct: 13  KLGEGTYATVFKGRSKLTENLV-------ALKEIRLEH--EEGAPCTAIRE--VSLLKDL 61

Query: 142 KICGVNGTH--------VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           K   +   H        + +VFE L  +L K  +      + + NV+  + QIL+GL Y 
Sbjct: 62  KHANIVTLHDIVHTDKSLTLVFEYLDKDL-KQYMDDCGNIMSMHNVKIFLYQILRGLAYC 120

Query: 194 HTKCRIIHTDIKPENVLL 211
           H + +++H D+KP+N+L+
Sbjct: 121 HRR-KVLHRDLKPQNLLI 137

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATG 232
           ++ ++RQ+L GL  LH +  I+H DIKPEN+L+ VD  +VK +   A     TG
Sbjct: 311 IKGVMRQVLTGLRKLH-RIGIVHRDIKPENLLVTVD-GQVKIIDFGAAVDMCTG 362

Length = 507

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 166 IVKSKYR--GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           I+KS Y   G+    + ++++++L+GL YLH     IH DIK  N+LL  D
Sbjct: 89  IMKSSYPRGGLDEAIIATVLKEVLKGLEYLH-SNGQIHRDIKAGNILLGED 138

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 111 ALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSK 170
           A +++  +K  R   +       V +L   F+    +  ++ +V E L       ++K  
Sbjct: 36  AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ----SKDYLYLVMEYLNGGDCASLIK-T 90

Query: 171 YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
             G+P +  +  I +++ G+  LH +  IIH DIKPEN+L  +D+ 
Sbjct: 91  LGGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLL--IDQT 133

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 45/162 (27%)

Query: 77  RYRVTRKLGWGHFSTVW---FTGSKTQVLVSPQ-----FPET-----ALDEIKLLK---- 119
           RY + ++LG G +  V       +  +  V+ +     F +      AL E+KLL+    
Sbjct: 1   RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG 60

Query: 120 -----CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGI 174
                C+ D D+  P                 N  ++    E++  +L + I++S   G 
Sbjct: 61  HKNITCLYDMDIVFPG--------------NFNELYLYE--ELMEADLHQ-IIRS---GQ 100

Query: 175 PLEN--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           PL +   +S I QIL GL Y+H+   ++H D+KP N+L+  D
Sbjct: 101 PLTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNAD 141

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 26/147 (17%)

Query: 78  YRVTRKLGWGHFSTVWF-----TG---SKTQVLVSPQFPETALD------EIKLLKCVRD 123
           +R  + LG G F  V+      TG   +  QV   P+ PET+ +      EI+LLK ++ 
Sbjct: 4   WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ- 62

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
                   ER+VQ     +        + M  E +    +K  +K+ Y  +     R   
Sbjct: 63  -------HERIVQYYGCLRDRAEKTLTIFM--EYMPGGSVKDQLKA-YGALTESVTRKYT 112

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVL 210
           RQIL+G++YLH+   I+H DIK  N+L
Sbjct: 113 RQILEGMSYLHSN-MIVHRDIKGANIL 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 28/148 (18%)

Query: 78  YRVTRKLGWGHFSTVWF-----TGSK---TQVLVSPQFPETALD------EIKLLKCVRD 123
           +R+ + LG G F  V+      TG +    QV   P+ PET+ +      EI+LLK    
Sbjct: 4   WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLK---- 59

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV-RSI 182
               +   ER+VQ     +        + M  E +    +K  +KS   G   ENV R  
Sbjct: 60  ----NLLHERIVQYYGCLRDPMERTLSIFM--EHMPGGSIKDQLKS--YGALTENVTRKY 111

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVL 210
            RQIL+G++YLH+   I+H DIK  N+L
Sbjct: 112 TRQILEGVSYLHSN-MIVHRDIKGANIL 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 24/146 (16%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQ-VLVSPQF---------PETALDEIKLLKCVRDGD 125
           + Y    KLG G ++TV+   SK    LV+ +          P TA+ E  LLK ++  +
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHAN 64

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
           +          LL D  I     T + +VFE +  +L + + K    G+  ENV+  + Q
Sbjct: 65  I---------VLLHD--IIHTKET-LTLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQ 111

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
           +L+GL+Y+H +  I+H D+KP+N+L+
Sbjct: 112 LLRGLSYIHQR-YILHRDLKPQNLLI 136

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 22/138 (15%)

Query: 83  KLGWGHFSTVWFTGSK-TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF 141
           KLG G ++TV+   SK T+ LV       AL EI+L     +G      RE  V LL + 
Sbjct: 12  KLGEGTYATVFKGRSKLTENLV-------ALKEIRLEH--EEGAPCTAIRE--VSLLKNL 60

Query: 142 KICGVNGTH--------VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           K   +   H        + +VFE L  +L K  + +    + + NV+  + Q+L+GL+Y 
Sbjct: 61  KHANIVTLHDIIHTERCLTLVFEYLDSDL-KQYLDNCGNLMSMHNVKIFMFQLLRGLSYC 119

Query: 194 HTKCRIIHTDIKPENVLL 211
           H + +I+H D+KP+N+L+
Sbjct: 120 HKR-KILHRDLKPQNLLI 136

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 16/33 (48%), Positives = 24/33 (72%), Gaps = 1/33 (3%)

Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           VR    Q+L+GL YLH+K  I+H D+K +N+L+
Sbjct: 110 VRFFTEQVLEGLAYLHSK-GILHRDLKADNLLV 141

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 43.5 bits (102), Expect = 6e-05
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 15/113 (13%)

Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDF--KICGVNGTHVCMVFEVLGHNLLKLIVKSKY 171
           E++LLK ++         E V+ LLD F       N   V +V  ++G +L  ++   K 
Sbjct: 64  ELRLLKHMK--------HENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIV---KC 112

Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-EARVKTLAL 223
           + +  E+V+ +I Q+L+GL Y+H+   IIH D+KP NV +  D E R+    L
Sbjct: 113 QKLSDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDCELRILDFGL 164

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 43.4 bits (102), Expect = 6e-05
 Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 25/153 (16%)

Query: 82  RKLGWGHFSTVWFTGSKTQ-VLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYR 131
            KLG G ++TV+   S+    LV+ +          P TA+ E  LLK ++  ++     
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANI----- 65

Query: 132 ERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLN 191
                LL D  I     T +  VFE +  +L + +++    G+   NVR  + Q+L+GL 
Sbjct: 66  ----VLLHD--IIHTKET-LTFVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLA 117

Query: 192 YLHTKCRIIHTDIKPENVLL-CVDEARVKTLAL 223
           Y+H +  I+H D+KP+N+L+  + E ++    L
Sbjct: 118 YIHGQ-HILHRDLKPQNLLISYLGELKLADFGL 149

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 153 MVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
           ++ E      L  I+    RG+    +R + RQ+L+ LN+LH+  ++IH D+K  N+LL 
Sbjct: 79  ILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLT 137

Query: 213 VD 214
           +D
Sbjct: 138 LD 139

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 172 RGIPLEN--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA 225
           +G+  EN  +++I+RQIL  L+ LH+   I+H D+KP+N++        K + L A
Sbjct: 248 KGLERENKIIQTIMRQILFALDGLHST-GIVHRDVKPQNIIFSEGSGSFKIIDLGA 302

Length = 566

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 43.0 bits (101), Expect = 7e-05
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 149 THVCMVFEVLGHNLLKL-IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
           TH+C+V  ++    LK  I     RG+ +E V     QI  G+ +LH+   I++ D+KPE
Sbjct: 66  THLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS-MDIVYRDMKPE 124

Query: 208 NVLL-CVDEARVKTLAL 223
           NVLL      R+  L L
Sbjct: 125 NVLLDDQGNCRLSDLGL 141

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 4/37 (10%)

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR-VK 219
           RQIL G+ YLH +  I+H DIKP N+L  ++ A+ VK
Sbjct: 175 RQILSGIAYLHRR-HIVHRDIKPSNLL--INSAKNVK 208

Length = 353

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLCVD-EARVKTLALNATELAATGHK 234
           QI+ GL +LH + RII+ D+KPENVLL  D   R+  L L A EL     K
Sbjct: 105 QIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGL-AVELKDGQSK 153

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRSIIRQILQGLNYLHTKCRIIHTD 203
           + GT + ++ E LG      ++K      PLE   + +I+R+IL+GL+YLH++ R IH D
Sbjct: 72  LKGTKLWIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE-RKIHRD 126

Query: 204 IKPENVLL 211
           IK  NVLL
Sbjct: 127 IKAANVLL 134

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 18/51 (35%), Positives = 27/51 (52%)

Query: 161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
              K + +     IP E +  I    ++ LNYL  + +IIH D+KP N+LL
Sbjct: 91  KFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL 141

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 25/159 (15%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKTQ----------VLVSPQFPETALDEIKLLK------C 120
           RY   R LG G    V F+   +           VL  PQ  + AL EIK+++       
Sbjct: 6   RYMDLRPLGCGSNGLV-FSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNI 64

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVR 180
           V+  +V  P       L +D          V +V E +  +L  ++ +     +  E+ R
Sbjct: 65  VKVYEVLGPSGSD---LTEDVGSL-TELNSVYIVQEYMETDLANVLEQGP---LSEEHAR 117

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
             + Q+L+GL Y+H+   ++H D+KP NV +  ++  +K
Sbjct: 118 LFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVLK 155

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           + R+ L+GL YLH     IH DIK  N+LL
Sbjct: 106 VCRETLKGLAYLHET-GKIHRDIKGANILL 134

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 50/179 (27%), Positives = 70/179 (39%), Gaps = 37/179 (20%)

Query: 74  FNNRY-RVTRKLGWGHFSTVWF---------TGSKTQVLV-----SPQFPETALDEIKLL 118
           F+ RY +  R LG GHF  V           TG    V         Q       EI +L
Sbjct: 1   FHKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINIL 60

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKIC----GVNGTHVCMVFEVLGHNLLKLIVKSKYRGI 174
           K +        Y E +V+    +K C    G  G  + M +  LG +L   + K K   +
Sbjct: 61  KTL--------YHENIVK----YKGCCSEQGGKGLQLIMEYVPLG-SLRDYLPKHK---L 104

Query: 175 PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGH 233
            L  +    +QI +G+ YLH++   IH D+   NVLL  D   VK       +    GH
Sbjct: 105 NLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRL-VKIGDFGLAKAVPEGH 161

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 151 VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
           +CM  E +    L  ++K K   IP   +  I   +L+GL YL  K +I+H D+KP N+L
Sbjct: 76  ICM--EHMDGGSLDQVLK-KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNIL 132

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 18/106 (16%)

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH-VCMVFEVLGHNLLKLI 166
           P +AL EI LLK ++         + +V+L D      ++    + +VFE    +L K  
Sbjct: 43  PSSALREICLLKELK--------HKNIVRLYDV-----LHSDKKLTLVFEYCDQDLKKYF 89

Query: 167 VKSKYRG-IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                 G I  E V+S + Q+L+GL + H+   ++H D+KP+N+L+
Sbjct: 90  --DSCNGDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLI 132

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 30/150 (20%)

Query: 75  NNRYRVTRKLGWGHFSTVWFTGSK-TQV-LVSPQFPET-------ALDEIKLLKCVRDGD 125
            N  RV   LG G +  V+      TQV +   + PE          +EI L   ++   
Sbjct: 9   ENGERVV--LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK--- 63

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII-- 183
                   +VQ L        NG     + +V G +L  L+ +SK+   PL++    I  
Sbjct: 64  -----HRNIVQYLGS---DSENGFFKIFMEQVPGGSLSALL-RSKWG--PLKDNEQTIIF 112

Query: 184 --RQILQGLNYLHTKCRIIHTDIKPENVLL 211
             +QIL+GL YLH   +I+H DIK +NVL+
Sbjct: 113 YTKQILEGLKYLHDN-QIVHRDIKGDNVLV 141

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 32/150 (21%)

Query: 78  YRVTRKLGWGHFSTVWF-----TG---SKTQVLVSPQFPETALD------EIKLLKCVRD 123
           +R+ + LG G F  V+      TG   +  QV   P   ET+ +      EI+LLK +R 
Sbjct: 4   WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR- 62

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTH--VCMVFEVLGHNLLKLIVKSKYRGIPLENV-R 180
                   +R+VQ    +  C  +     + +  E +    +K  +K+   G   ENV R
Sbjct: 63  -------HDRIVQ----YYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA--YGALTENVTR 109

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
              RQILQG++YLH+   I+H DIK  N+L
Sbjct: 110 RYTRQILQGVSYLHSN-MIVHRDIKGANIL 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 41.1 bits (96), Expect = 4e-04
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 169 SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +  R I + ++ +I R +L+ + YLH   RIIH DIK EN+ +
Sbjct: 174 AAKRNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFI 215

Length = 391

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 17/49 (34%), Positives = 29/49 (59%)

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
           +K K +    E + +I  Q++  L YLH + RI+H D+ P N++L  D+
Sbjct: 103 LKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 177 ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           E + ++   +L+ L++LH +  +IH DIK +++LL  D  RVK
Sbjct: 115 EQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSD-GRVK 155

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 175 PLENVRSI--IRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL-NATELAAT 231
             +    I    Q+L+GL+YLH   +IIH D+K  N+L+     R++      A  LAA 
Sbjct: 99  AFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157

Query: 232 G 232
           G
Sbjct: 158 G 158

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 33/183 (18%)

Query: 78  YRVTRKLGWGHFSTV----WFTGSKTQVLVSPQFPETALD----EIKLLKCVRDGDVNDP 129
           + + RKLG G+F  V    W    +  + +              E++ LK +R       
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLR------- 60

Query: 130 YRERVVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQ 188
             + ++ L   F +C V G  V ++ E++   +LL  +   + + +P+ ++  +  Q+ +
Sbjct: 61  -HKHLISL---FAVCSV-GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAE 115

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA-------LNATELAATGHKLPVSFCS 241
           G+ YL  +   IH D+   N+L  V E  V  +A       +      ++  K+P  +  
Sbjct: 116 GMAYLEEQ-NSIHRDLAARNIL--VGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKW-- 170

Query: 242 TAP 244
           TAP
Sbjct: 171 TAP 173

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 23/146 (15%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKT--QVLVSPQFP---------ETALDEIKLLKCVRDGD 125
           +Y   R +G G F  V     K   ++++  Q P           A +E ++LK +   +
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
           + + Y       L+D          + M +   G  L + I K     +  + +     Q
Sbjct: 61  IIEYYE----NFLED------KALMIVMEY-APGGTLAEYIQKRCNSLLDEDTILHFFVQ 109

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
           IL  L+++HTK  I+H D+K +N+LL
Sbjct: 110 ILLALHHVHTK-LILHRDLKTQNILL 134

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 20/145 (13%)

Query: 78  YRVTRKLGWGHFSTVW----FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDV----NDP 129
           +++ +K+G G FS V+        K   L   Q  E  +D      CV++ D+    N P
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQDCVKEIDLLKQLNHP 62

Query: 130 YRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV---KSKYRGIPLENVRSIIRQI 186
               V++ LD F    +    + +V E+     L  ++   K + R IP   V     Q+
Sbjct: 63  ---NVIKYLDSF----IEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQL 115

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLL 211
              + ++H++ R++H DIKP NV +
Sbjct: 116 CSAVEHMHSR-RVMHRDIKPANVFI 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 40.2 bits (95), Expect = 5e-04
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 30/151 (19%)

Query: 78  YRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVRDG 124
           +   + LG G F  V       +G        SK +++   Q  E  L+E ++L+ +R  
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQV-EHVLNEKRILQSIRH- 60

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSII 183
               P+   +V L   F+    + +++ +V E V G  L   + KS     P    R   
Sbjct: 61  ----PF---LVNLYGSFQ----DDSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYA 107

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            Q++  L YLH+   I++ D+KPEN+LL  D
Sbjct: 108 AQVVLALEYLHS-LDIVYRDLKPENLLLDSD 137

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 32/167 (19%)

Query: 70  IGMLFNN-----RYRVTRKLGWGHFSTVWF-TGSKTQVLVS--------PQFPETALDEI 115
           I  LF+       +   R++G G F  V+F    +T  +V+         Q  E   D I
Sbjct: 4   IAELFSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDII 63

Query: 116 KLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGI 174
           K ++ ++   +  P          ++K C +      +V E  LG     L V  K    
Sbjct: 64  KEVRFLQQ--LRHPN-------TIEYKGCYLREHTAWLVMEYCLGSASDILEVHKK---- 110

Query: 175 PLENVR--SIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           PL+ V   +I    LQGL YLH+  R IH DIK  N+LL  +   VK
Sbjct: 111 PLQEVEIAAICHGALQGLAYLHSHER-IHRDIKAGNILL-TEPGTVK 155

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 39.9 bits (93), Expect = 7e-04
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 33/176 (18%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERV-- 134
           RY + ++LG G F TV+    K  V         A + +K+LK +  G++N    E V  
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAV---------AEERLKVLKEIPVGELNP--NETVQA 49

Query: 135 ---VQLLDD--------FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRG--IPLENVR 180
               QLL          F    +     C++ E   G +L   + + K+ G  +    V 
Sbjct: 50  NQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVC 109

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENV-----LLCVDEARVKTLALNATELAAT 231
               Q+L G++Y+H + RI+H D+K +N+     LL + +  V  L + + +LA T
Sbjct: 110 EWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATT 164

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
             +C+V  ++ G +L   I      G P         QI+ GL +LH + RI++ D+KPE
Sbjct: 66  DDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPE 124

Query: 208 NVLL 211
           NVLL
Sbjct: 125 NVLL 128

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 12/135 (8%)

Query: 83  KLGWGHFSTVW-FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDV----NDPYRERVVQL 137
           +LG G++ +V+      T V ++ +     LDE K  + + + D+      PY   +V  
Sbjct: 8   ELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPY---IVDF 64

Query: 138 LDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV-RSIIRQILQGLNYLHTK 196
              F I G    ++CM + +   +L KL           E+V R I   +++GL +L  +
Sbjct: 65  YGAFFIEG--AVYMCMEY-MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE 121

Query: 197 CRIIHTDIKPENVLL 211
             IIH D+KP NVL+
Sbjct: 122 HNIIHRDVKPTNVLV 136

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 39.9 bits (93), Expect = 8e-04
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +QIL G+ YLH  C ++H DIK  NV+L
Sbjct: 109 KQILDGVAYLHNNC-VVHRDIKGNNVML 135

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 40.0 bits (93), Expect = 9e-04
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 16/104 (15%)

Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKY 171
           E++LLK ++         E V+ LLD F           V +V  ++G +L  ++   K 
Sbjct: 66  ELRLLKHMK--------HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KC 114

Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
           + +  ++V+ +I QIL+GL Y+H+   IIH D+KP N  L V+E
Sbjct: 115 QKLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNE 155

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 40.0 bits (94), Expect = 9e-04
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 16/103 (15%)

Query: 112 LDEIKLLKCVRDGDVNDPYRERVVQLLDDFK-ICGVNGTHVCMVFEVLGHNLLKLIVKSK 170
           L EIKLL+ +          E V+ + D            V +V+E++  +L ++I  S+
Sbjct: 52  LREIKLLRHLD--------HENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQ 103

Query: 171 YRGIPLEN--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                L +   +  + Q+L+GL Y+H+   ++H D+KP N+LL
Sbjct: 104 ----TLSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLL 141

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 134 VVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           V+ LLD   + G+     C+V      + L   + ++ R + L  V ++ RQ+L  ++Y+
Sbjct: 222 VLALLDVRVVGGLT----CLVLPKY-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYI 276

Query: 194 HTKCRIIHTDIKPENVLL 211
           H +  IIH DIK ENVL+
Sbjct: 277 HGE-GIIHRDIKTENVLV 293

Length = 461

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)

Query: 151 VCMVFEVLGHNLLKLI-------VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTD 203
           V ++F+   H+L  +I          K   +P   V+S++ QIL G++YLH    ++H D
Sbjct: 75  VWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRD 133

Query: 204 IKPENVLL 211
           +KP N+L+
Sbjct: 134 LKPANILV 141

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 27/231 (11%)

Query: 1   MGNKNQNSSSNYGGEYNYHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDY 60
           M +   +   N   E N+    N      + ++D+  DEEE  +   + +++++E   D 
Sbjct: 1   MKDWPIDEDINIYEEKNHKA--NKGGSGKFEMNDKKLDEEERSHNNNAGEDEDEEKMIDN 58

Query: 61  CKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWF-----TGSKT---QVLVSPQFPETAL 112
                    I    N  Y++   +G G F  V+      T  K    +VL  PQ+    L
Sbjct: 59  --------DINRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNREL 110

Query: 113 DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYR 172
             +K L  +    + D Y     +  +      V    +        H  +K   ++ + 
Sbjct: 111 LIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTV----HKYMKHYARNNH- 165

Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL 223
            +PL  V+    Q+ + L Y+H+K  I H D+KP+N+L+   +    TL L
Sbjct: 166 ALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLI---DPNTHTLKL 212

Length = 440

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 1/29 (3%)

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           + QIL+GL Y+H+   ++H D+KP N+LL
Sbjct: 112 LYQILRGLKYIHS-ANVLHRDLKPSNLLL 139

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 10/99 (10%)

Query: 112 LDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKY 171
           L EIKLL+ +R  D+ +     +     +FK        + +VFE++  +L ++I  +  
Sbjct: 47  LREIKLLRLLRHPDIVEIKHIMLPPSRREFK-------DIYVVFELMESDLHQVIKAND- 98

Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
             +  E+ +  + Q+L+ L Y+HT   + H D+KP+N+L
Sbjct: 99  -DLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNIL 135

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 148 GTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP 206
            T++C+V +   G  L +L+ +   + +  E  R    ++L  L YLH    I++ D+KP
Sbjct: 73  ETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKP 131

Query: 207 ENVLL 211
           EN+LL
Sbjct: 132 ENILL 136

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 3/39 (7%)

Query: 175 PLE--NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           PL+   + +I+R+IL+GL+YLH++ + IH DIK  NVLL
Sbjct: 97  PLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLL 134

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 16/130 (12%)

Query: 133 RVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
           ++VQL   + +C    + +C+VFE + H  L   ++++      E +  +   + +G+ Y
Sbjct: 60  KLVQL---YGVCTER-SPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAY 115

Query: 193 LHTKCRIIHTDIKPENVLLCVDEARVKTLA--------LNATELAATGHKLPVSFCSTAP 244
           L +   +IH D+   N L  V E +V  ++        L+    ++TG K PV + S+  
Sbjct: 116 LESSN-VIHRDLAARNCL--VGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKW-SSPE 171

Query: 245 VQEYSELSRR 254
           V  +S+ S +
Sbjct: 172 VFSFSKYSSK 181

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 151 VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
           +CM  E++   L KL+ +     IP + +  +   I++ L+YL  K  +IH D+KP N+L
Sbjct: 91  ICM--ELMSTCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNIL 147

Query: 211 L 211
           L
Sbjct: 148 L 148

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 38.2 bits (88), Expect = 0.003
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 3/68 (4%)

Query: 153 MVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +V E  G  ++  LI  +K   +  E +  I R+IL+GL++LH   ++IH DIK +NVLL
Sbjct: 86  LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLL 144

Query: 212 CVDEARVK 219
             + A VK
Sbjct: 145 -TENAEVK 151

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 17/114 (14%)

Query: 104 SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLL 163
           S  F + A  E+ LLK ++         E V+ LLD F    V+G      + V+ +   
Sbjct: 54  SEIFAKRAYRELTLLKHMQ--------HENVIGLLDVF-TSAVSGDEFQDFYLVMPYMQT 104

Query: 164 KLIVKSKYRGIPL--ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
            L    K  G PL  + V+ ++ Q+L GL Y+H    IIH D+KP N  L V+E
Sbjct: 105 DL---QKIMGHPLSEDKVQYLVYQMLCGLKYIH-SAGIIHRDLKPGN--LAVNE 152

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 38.5 bits (89), Expect = 0.003
 Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           L+  R+I++Q+L  + Y+H K ++IH DIK EN+ L  D
Sbjct: 266 LKQTRAIMKQLLCAVEYIHDK-KLIHRDIKLENIFLNCD 303

Length = 501

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 51/162 (31%)

Query: 83  KLGWGHFSTVWFTGSKT------QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQ 136
           KLG G F  V      T       V V               KC++         +++  
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAV---------------KCLKS--------DKLSD 38

Query: 137 LLDDF----------------KICGVNGTH-VCMVFEV--LGHNLLKLIVKSKYRGIPLE 177
           ++DDF                ++ GV  TH + MV E+  LG +LL  + K       + 
Sbjct: 39  IMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG-SLLDRLRKDALGHFLIS 97

Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            +     QI  G+ YL +K R IH D+   N+LL  D+ +VK
Sbjct: 98  TLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDD-KVK 137

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 38.1 bits (88), Expect = 0.004
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)

Query: 151 VCMVFEVLGHNLLKLI-------VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTD 203
           V ++F+   H+L  +I          K   +P   V+S++ QIL G++YLH    ++H D
Sbjct: 75  VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRD 133

Query: 204 IKPENVLL 211
           +KP N+L+
Sbjct: 134 LKPANILV 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 6/64 (9%)

Query: 150 HVCMVFE-VLGHNLLKLIVKSKYRG-IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
           H+CMV E V G +   L+   K  G +P++  R    + +  L YLH    I+H D+KP+
Sbjct: 75  HLCMVMEYVEGGDCATLL---KNIGALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPD 130

Query: 208 NVLL 211
           N+L+
Sbjct: 131 NLLI 134

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           R +    +R + +Q L+ LNYLH   +IIH D+K  N+L  +D
Sbjct: 98  RPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLD 139

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 146 VNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLE--NVRSIIRQILQGLNYLHTKCRIIHT 202
           + GT + ++ E LG  + L L+     R  P +   + +++++IL+GL+YLH++ + IH 
Sbjct: 72  LKGTKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLHSE-KKIHR 125

Query: 203 DIKPENVLL 211
           DIK  NVLL
Sbjct: 126 DIKAANVLL 134

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	284
KOG0598|consensus	357		100.0
KOG0615|consensus	475		100.0
KOG0595|consensus	429		100.0
KOG1290|consensus	590		100.0
KOG0575|consensus	592		100.0
KOG0583|consensus	370		99.98
KOG0616|consensus	355		99.98
KOG0592|consensus	604		99.97
KOG0593|consensus	396		99.97
KOG0581|consensus	364		99.97
KOG0661|consensus	538		99.97
KOG0591|consensus	375		99.97
KOG0605|consensus	550		99.97
KOG0192|consensus	362		99.97
KOG0600|consensus	560		99.97
KOG0610|consensus	459		99.97
KOG0694|consensus	694		99.97
KOG0658|consensus	364		99.96
KOG0659|consensus	318		99.96
KOG0198|consensus	313		99.96
KOG0663|consensus	419		99.96
KOG0597|consensus	808		99.96
KOG0578|consensus	550		99.96
KOG0611|consensus	668		99.96
KOG0582|consensus	516		99.96
KOG0594|consensus	323		99.96
KOG0612|consensus	1317		99.96
KOG0588|consensus	786		99.96
PHA03207	392	serine/threonine kinase US3; Provisional	99.95
KOG0032|consensus	382		99.95
PTZ00036	440	glycogen synthase kinase; Provisional	99.95
KOG0667|consensus	586		99.95
KOG0585|consensus	576		99.95
KOG0580|consensus	281		99.95
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.95
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.95
PHA03212	391	serine/threonine kinase US3; Provisional	99.95
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.95
KOG0589|consensus	426		99.95
KOG0033|consensus	355		99.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
KOG4236|consensus	888		99.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.95
PHA03209	357	serine/threonine kinase US3; Provisional	99.95
KOG0690|consensus	516		99.95
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.95
KOG0584|consensus	632		99.95
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.95
KOG0579|consensus	1187		99.95
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.95
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.94
PTZ00284	467	protein kinase; Provisional	99.94
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.94
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.94
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.94
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.94
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
KOG2052|consensus	513		99.94
KOG0577|consensus	948		99.94
KOG1989|consensus	738		99.94
KOG0574|consensus	502		99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
KOG0197|consensus	468		99.94
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.94
KOG0586|consensus	596		99.94
PHA03210	501	serine/threonine kinase US3; Provisional	99.94
KOG0201|consensus	467		99.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.94
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.94
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.94
PHA03211	461	serine/threonine kinase US3; Provisional	99.94
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.94
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
KOG4717|consensus	864		99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
KOG0660|consensus	359		99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.94
KOG0599|consensus	411		99.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.94
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.94
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.93
KOG1187|consensus	361		99.93
KOG0614|consensus	732		99.93
KOG0608|consensus	1034		99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
KOG0986|consensus	591		99.93
KOG1152|consensus	772		99.93
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.93
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.93
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
PTZ00267	478	NIMA-related protein kinase; Provisional	99.93
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.93
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.93
KOG0607|consensus	463		99.93
KOG3653|consensus	534		99.93
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.93
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.93
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.93
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.93
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.93
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.93
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
KOG0193|consensus	678		99.93
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.93
KOG0671|consensus	415		99.93
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.93
KOG4721|consensus	904		99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.92
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.92
KOG0604|consensus	400		99.92
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.92
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.92
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.92
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.92
KOG0662|consensus	292		99.92
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.92
PTZ00283	496	serine/threonine protein kinase; Provisional	99.92
KOG4279|consensus	1226		99.92
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.92
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.92
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.92
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.92
KOG4250|consensus	732		99.92
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.92
KOG0696|consensus	683		99.92
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.92
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.92
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.92
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.92
KOG0666|consensus	438		99.92
PHA02882	294	putative serine/threonine kinase; Provisional	99.92
KOG0587|consensus	953		99.92
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.91
PLN00009	294	cyclin-dependent kinase A; Provisional	99.91
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.91
KOG2345|consensus	302		99.91
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.91
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.91
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.91
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.91
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.91
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.91
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.91
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.91
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.91
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.91
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.91
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.91
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.91
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.91
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.91
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.91
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.91
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.9
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.9
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.9
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.9
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.9
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.9
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.9
KOG1035|consensus	1351		99.9
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.9
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.9
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.9
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.9
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.9
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.9
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.9
KOG0984|consensus	282		99.9
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.9
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.9
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.9
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.9
KOG0596|consensus	677		99.9
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.9
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.9
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.9
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.9
KOG0670|consensus	752		99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.9
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.9
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.9
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.9
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.9
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.9
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.9
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.9
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.9
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.9
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.9
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.9
KOG0695|consensus	593		99.9
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.9
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.9
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.9
KOG0194|consensus	474		99.9
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.9
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.9
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.9
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.9
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.9
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.9
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.9
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.9
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.9
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.9
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.9
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.9
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.9
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.9
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.9
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.9
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.9
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.9
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.89
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.89
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.89
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.89
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.89
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.89
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.89
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.89
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.89
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.89
KOG4645|consensus	1509		99.89
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.89
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.89
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.89
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.89
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.89
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.89
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.89
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.89
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.89
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.89
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.89
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.89
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.89
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.89
KOG1163|consensus	341		99.89
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.89
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.89
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.89
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.89
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.89
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.89
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.89
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.89
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.89
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.89
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.89
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.89
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.89
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.89
KOG0669|consensus	376		99.89
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.89
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.89
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.89
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.89
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.89
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.89
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.89
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.89
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.89
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.89
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.89
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.88
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.88
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.88
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.88
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.88
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.88
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.88
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.88
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.88
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.88
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.88
KOG1151|consensus	775		99.88
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.88
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.88
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.88
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.88
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.88
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.88
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.88
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.88
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.88
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.88
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.88
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.88
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.88
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.88
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.88
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.88
PHA02988	283	hypothetical protein; Provisional	99.88
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.88
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.88
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.88
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.88
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.88
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.88
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.88
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.88
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.87
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.87
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.87
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.87
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.87
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.87
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.87
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.87
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.87
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.87
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.87
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.87
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.87
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.87
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.87
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.87
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.87
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.87
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.87
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.87
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.87
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.87
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.87
KOG0576|consensus	829		99.87
KOG0983|consensus	391		99.87
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.87
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.87
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.87
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.87
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.87
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.87
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.86
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.86
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.86
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.86
KOG1165|consensus	449		99.86
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.86
KOG4257|consensus	974		99.86
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.86
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.86
KOG0603|consensus	612		99.86
KOG1006|consensus	361		99.86
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.86
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.86
KOG1164|consensus	322		99.86
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.86
KOG0664|consensus	449		99.85
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.85
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.85
KOG1095|consensus	1025		99.85
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.85
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.85
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.85
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.85
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.85
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.85
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.85
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.85
KOG0668|consensus	338		99.85
KOG1345|consensus	378		99.84
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.84
KOG1026|consensus	774		99.84
KOG1167|consensus	418		99.84
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.84
KOG1094|consensus	807		99.83
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.82
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.82
KOG4278|consensus	1157		99.82
KOG1027|consensus	903		99.82
KOG0196|consensus	996		99.81
KOG0199|consensus	1039		99.8
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.8
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.79
PRK10345	210	hypothetical protein; Provisional	99.79
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.78
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.77
KOG0200|consensus	609		99.77
KOG0665|consensus	369		99.77
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.76
KOG1025|consensus	1177		99.75
PRK12274	218	serine/threonine protein kinase; Provisional	99.75
smart00090	237	RIO RIO-like kinase.	99.73
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.7
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.68
PRK14879	211	serine/threonine protein kinase; Provisional	99.67
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.66
PLN00181	793	protein SPA1-RELATED; Provisional	99.65
KOG1166|consensus	974		99.65
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.64
KOG0590|consensus	601		99.62
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.61
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.58
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.56
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.55
KOG4158|consensus	598		99.49
KOG0603|consensus	612		99.46
KOG3087|consensus	229		99.4
KOG1024|consensus	563		99.39
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.26
KOG1240|consensus	1431		99.23
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.2
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.18
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.17
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.15
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.13
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.11
KOG0606|consensus	1205		99.07
KOG0590|consensus	601		99.01
KOG1033|consensus	516		98.99
KOG0195|consensus	448		98.95
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.95
KOG0601|consensus	524		98.93
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.89
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.81
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.79
PRK09902	216	hypothetical protein; Provisional	98.7
KOG1023|consensus	484		98.48
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.48
KOG1243|consensus	690		98.44
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.39
KOG0601|consensus	524		98.39
PF01636	239	APH: Phosphotransferase enzyme family This family	98.28
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.24
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.11
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.96
KOG1266|consensus	458		97.95
KOG3741|consensus	655		97.86
KOG1235|consensus	538		97.82
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.81
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.74
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.73
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.73
PLN02876	822	acyl-CoA dehydrogenase	97.7
KOG2270|consensus	520		97.62
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.5
PRK10593	297	hypothetical protein; Provisional	97.32
COG4248	637	Uncharacterized protein with protein kinase and he	97.22
KOG0606|consensus	1205		97.13
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.92
KOG0576|consensus	829		96.92
PRK05231	319	homoserine kinase; Provisional	96.82
KOG2268|consensus	465		96.77
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.75
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.73
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.71
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.37
KOG2137|consensus	700		96.24
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	95.72
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	95.4
PLN02756	418	S-methyl-5-thioribose kinase	95.15
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.13
PHA03111	444	Ser/Thr kinase; Provisional	95.1
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.02
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	94.91
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	94.83
PLN02236	344	choline kinase	94.67
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	94.45
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.9
COG2334	331	Putative homoserine kinase type II (protein kinase	93.8
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	93.33
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	93.22
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	92.73
PRK10271	188	thiK thiamine kinase; Provisional	92.54
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	92.29
PRK11768	325	serine/threonine protein kinase; Provisional	91.66
PRK06149	972	hypothetical protein; Provisional	91.54
KOG2269|consensus	531		91.37
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	91.07
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	90.76
PRK06148	1013	hypothetical protein; Provisional	90.43
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	89.39

>KOG0598|consensus

Probab=100.00  E-value=8.3e-36  Score=255.03  Aligned_cols=163  Identities=22%  Similarity=0.366  Sum_probs=143.2

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEec-------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVS-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|+++++||+|+||+||.++.+.     ++|+.       ....+...+|..+|..++|        |.|+.++..|+ 
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h--------PFiv~l~ysFQ-   95 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH--------PFIVKLIYSFQ-   95 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC--------CcEeeeEEecc-
Confidence            469999999999999999997642     33321       2234567889999999988        77999999888 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +...+|+|+||+ ||.|+-.+.+.+  .+++..++.|+.+|+.||.|||++ |||||||||+||||+.+ ++++|+|
T Consensus        96 ---t~~kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~-GHi~LtD  168 (357)
T KOG0598|consen   96 ---TEEKLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQ-GHIKLTD  168 (357)
T ss_pred             ---cCCeEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCC-CcEEEec
Confidence               999999999999 779998887765  599999999999999999999999 99999999999999555 9999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||+|+..........++|||+.|||||++.+.
T Consensus       169 FgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~  200 (357)
T KOG0598|consen  169 FGLCKEDLKDGDATRTFCGTPEYMAPEILLGK  200 (357)
T ss_pred             cccchhcccCCCccccccCCccccChHHHhcC
Confidence            99999888888888899999999999999876

>KOG0615|consensus

Probab=100.00  E-value=3e-35  Score=254.17  Aligned_cols=168  Identities=26%  Similarity=0.431  Sum_probs=144.0

Q ss_pred             eccceEEEEEecccCceeEEEeccee-----EEEecCC-----------CChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ-----------FPETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~-----------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      +...|.+.+.||+|+||.|-+|..+.     ++|+...           ......+|+++|+++.|        |+|+++
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H--------P~IV~~  241 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH--------PNIVRI  241 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC--------CCEEEE
Confidence            44569999999999999999997743     4444211           22335799999999999        779999


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--  214 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--  214 (284)
                      +++|+    ...+.||||||+ ||.|++++..+.  .+.+...+.++.|++.||.|||++ ||+||||||+|||++.+  
T Consensus       242 ~d~f~----~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNILl~~~~e  314 (475)
T KOG0615|consen  242 KDFFE----VPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENILLSNDAE  314 (475)
T ss_pred             eeeee----cCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHc-CcccccCCcceEEeccCCc
Confidence            99998    788899999999 899999999876  488899999999999999999999 99999999999999655  


Q ss_pred             CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhccch
Q psy16752        215 EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      +..+||.|||+|++.. ...+..|+||||.|.|||++.++-.+
T Consensus       315 ~~llKItDFGlAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~  356 (475)
T KOG0615|consen  315 DCLLKITDFGLAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVE  356 (475)
T ss_pred             ceEEEecccchhhccc-cceehhhhcCCccccChhheecCCee
Confidence            3589999999999888 45788899999999999999876544

>KOG0595|consensus

Probab=100.00  E-value=3.5e-35  Score=253.70  Aligned_cols=161  Identities=25%  Similarity=0.480  Sum_probs=137.8

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|.+...||+|+||+||+|+++.     ++|....      ..+-+..|+.+|+.++|        +|||.+++..+  
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H--------~nIV~l~d~~~--   79 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH--------PNIVRLLDCIE--   79 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC--------cceeeEEEEEe--
Confidence            469999999999999999998843     3333222      23456789999999998        77999999877  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--C---CcE
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--E---ARV  218 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~---~~v  218 (284)
                        ..+++|+||||| +|+|..++.+..  .+++..++.++.||+.||.+||++ +||||||||+||||+..  .   ..+
T Consensus        80 --~~~~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~~~~~~L  154 (429)
T KOG0595|consen   80 --DDDFIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARNDTSPVL  154 (429)
T ss_pred             --cCCeEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCCCCCceE
Confidence              888999999999 688888887664  599999999999999999999999 99999999999999764  1   479


Q ss_pred             EEEeccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ||+|||+|+....+ ....+.||+|-|||||++.
T Consensus       155 KIADFGfAR~L~~~-~~a~tlcGSplYMAPEV~~  187 (429)
T KOG0595|consen  155 KIADFGFARFLQPG-SMAETLCGSPLYMAPEVIM  187 (429)
T ss_pred             EecccchhhhCCch-hHHHHhhCCccccCHHHHH
Confidence            99999999988754 5666899999999999995

>KOG1290|consensus

Probab=100.00  E-value=9.1e-33  Score=243.04  Aligned_cols=174  Identities=63%  Similarity=1.075  Sum_probs=157.5

Q ss_pred             ccccccCCCCccccCCCcCCCCCCcccccccceec-cceEEEEEecccCceeEEEeccee-----EEEe---cCCCChhh
Q psy16752         41 ENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFN-NRYRVTRKLGWGHFSTVWFTGSKT-----QVLV---SPQFPETA  111 (284)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~---~~~~~~~~  111 (284)
                      ........++++++|+..+|..+++.|+.+|+.|. +||.++++||-|.|++||+|.+..     ++|+   ...+.+..
T Consensus        42 ~~~~~~~g~~~~eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaA  121 (590)
T KOG1290|consen   42 NMSSSILGSDDEEQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAA  121 (590)
T ss_pred             CCccccccCCcccccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHH
Confidence            33444556667788999999999999999999998 999999999999999999998832     4444   45567889


Q ss_pred             HHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q psy16752        112 LDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLN  191 (284)
Q Consensus       112 ~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  191 (284)
                      +.||.+|++++.....+++..+||+|++.|...++.+.++|+|+|++|..|+.+|.+...++++...++.|++||+.||+
T Consensus       122 lDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLd  201 (590)
T KOG1290|consen  122 LDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLD  201 (590)
T ss_pred             HHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence            99999999999888788888999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHhhCCCcEecCCCCCCeeEeeC
Q psy16752        192 YLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       192 ~LH~~~givHrDiKp~NIll~~~  214 (284)
                      |||.+|||||-||||+|||+...
T Consensus       202 YLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  202 YLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             HHHHhcCccccCCCcceeeeecc
Confidence            99999999999999999999765

>KOG0575|consensus

Probab=100.00  E-value=5.5e-33  Score=250.57  Aligned_cols=162  Identities=27%  Similarity=0.435  Sum_probs=143.7

Q ss_pred             cceEEEEEecccCceeEEEecc-----eeEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .+|...+.||+|||+.||.+++     .+++|+++.       ..+.+.+||.+.+.|.|        +||++++..|+ 
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~H--------pnIV~f~~~FE-   88 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKH--------PNIVQFYHFFE-   88 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCC--------CcEEeeeeEee-
Confidence            3699999999999999999987     235555433       46778999999999999        77999999999 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +..++|||+|+| .++|..++.+..  .+++.+++.++.||+.||.|||++ +|||||||..|+||+.+ ..|||+|
T Consensus        89 ---Ds~nVYivLELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKLGNlfL~~~-~~VKIgD  161 (592)
T KOG0575|consen   89 ---DSNNVYIVLELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKLGNLFLNEN-MNVKIGD  161 (592)
T ss_pred             ---cCCceEEEEEecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhc-CceecccchhheeecCc-CcEEecc
Confidence               999999999999 667777776443  699999999999999999999999 99999999999999544 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||+|.....+.....+.||||-|+||||+..
T Consensus       162 FGLAt~le~~~Erk~TlCGTPNYIAPEVl~k  192 (592)
T KOG0575|consen  162 FGLATQLEYDGERKKTLCGTPNYIAPEVLNK  192 (592)
T ss_pred             cceeeeecCcccccceecCCCcccChhHhcc
Confidence            9999999988888899999999999999974

>KOG0583|consensus

Probab=99.98  E-value=3.7e-32  Score=243.04  Aligned_cols=166  Identities=27%  Similarity=0.473  Sum_probs=142.8

Q ss_pred             ccceEEEEEecccCceeEEEecc-----eeEEEecCC---------CChhhHHHHHHHHhhh-cCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ---------FPETALDEIKLLKCVR-DGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~---------~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~  139 (284)
                      .++|.+.+.||+|+||.|++|.+     .+++++...         ..+.+.+|+.+++.++ |        +||+++++
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~H--------pnI~~l~e   87 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSH--------PNIIRLLE   87 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccC--------CCEeEEEE
Confidence            45799999999999999999976     234444222         2345568999999999 6        77999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v  218 (284)
                      ++.    ....+|+||||+ +|.|++.+...  +++.+..++.+|+||+.||+|||++ ||+||||||+|||++.+.+.+
T Consensus        88 v~~----t~~~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENilld~~~~~~  160 (370)
T KOG0583|consen   88 VFA----TPTKIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILLDGNEGNL  160 (370)
T ss_pred             EEe----cCCeEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEecCCCCCE
Confidence            888    777799999999 77999999883  3699999999999999999999999 999999999999996655899


Q ss_pred             EEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+|||++...........++|||+.|+|||++.++.
T Consensus       161 Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~  197 (370)
T KOG0583|consen  161 KLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKG  197 (370)
T ss_pred             EEeccccccccCCCCCcccCCCCCcccCCHHHhCCCC
Confidence            9999999987754446777999999999999999977

>KOG0616|consensus

Probab=99.98  E-value=1e-32  Score=229.64  Aligned_cols=161  Identities=25%  Similarity=0.382  Sum_probs=138.1

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .+|++++.||.|+||+|.+++.+.     ++|+...       ..+...+|.++|+.+.|        |.++.+++.+. 
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~--------PFlv~l~~t~~-  114 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSH--------PFLVKLYGTFK-  114 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccC--------ceeEEEEEeec-
Confidence            369999999999999999998753     3433221       23446778999999988        77999998877 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +..++|+||||. ||.|+.++.+.+  ++++..++.+++||+.||+|||+. +|++|||||+|||++.+ |+++|.|
T Consensus       115 ---d~~~lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~-G~iKitD  187 (355)
T KOG0616|consen  115 ---DNSNLYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQN-GHIKITD  187 (355)
T ss_pred             ---cCCeEEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccC-CcEEEEe
Confidence               899999999999 788888887754  699999999999999999999999 99999999999999555 9999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+|+.....   +.+.||||.|+|||++..+-
T Consensus       188 FGFAK~v~~r---T~TlCGTPeYLAPEii~sk~  217 (355)
T KOG0616|consen  188 FGFAKRVSGR---TWTLCGTPEYLAPEIIQSKG  217 (355)
T ss_pred             ccceEEecCc---EEEecCCccccChHHhhcCC
Confidence            9999877654   67899999999999998764

>KOG0592|consensus

Probab=99.97  E-value=8e-32  Score=239.91  Aligned_cols=165  Identities=28%  Similarity=0.381  Sum_probs=139.8

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEe-------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLV-------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~-------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .+|.+.+.||.|+|++|++|+++.     ++|+       .......+..|-.+|.+|.+       ||+|++|+..|. 
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~-------hPgivkLy~TFQ-  144 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSG-------HPGIVKLYFTFQ-  144 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhC-------CCCeEEEEEEee-
Confidence            579999999999999999998742     4443       23334566788889999964       488999999998 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +...+|+|+||+ +|+|+++|.+-+  .|++..++.|++||+.||+|||+. |||||||||+||||+.| ++++|.|
T Consensus       145 ---D~~sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~d-mhikITD  217 (604)
T KOG0592|consen  145 ---DEESLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKD-GHIKITD  217 (604)
T ss_pred             ---cccceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCC-CcEEEee
Confidence               899999999999 899999998764  699999999999999999999999 99999999999999555 9999999


Q ss_pred             ccchhHhhhCCCC-------------CCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKL-------------PVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~-------------~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||.|+...+....             ..+++|||.|++||+|+...
T Consensus       218 FGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~  263 (604)
T KOG0592|consen  218 FGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP  263 (604)
T ss_pred             ccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCC
Confidence            9999866543221             24689999999999998654

>KOG0593|consensus

Probab=99.97  E-value=1.8e-32  Score=228.89  Aligned_cols=165  Identities=25%  Similarity=0.401  Sum_probs=143.0

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|+.+.++|+|+||+||+|+++.     +++..      +...+-+++|+++|+.++|        +|+|.+++.|.  
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH--------~NLVnLiEVFr--   71 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH--------ENLVNLIEVFR--   71 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc--------chHHHHHHHHH--
Confidence            468999999999999999999853     33221      1123557999999999999        77999999998  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ....+++|+||+..+.++.+.+... +++...++.++.|++.|+.|+|++ ++|||||||+||||+.+ +.+|+||||
T Consensus        72 --rkrklhLVFE~~dhTvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~-gvvKLCDFG  146 (396)
T KOG0593|consen   72 --RKRKLHLVFEYCDHTVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQN-GVVKLCDFG  146 (396)
T ss_pred             --hcceeEEEeeecchHHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecC-CcEEeccch
Confidence              8899999999999999999988764 599999999999999999999999 99999999999999655 999999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|+....+...-...+.|-+|.|||.+-+..
T Consensus       147 FAR~L~~pgd~YTDYVATRWYRaPELLvGDt  177 (396)
T KOG0593|consen  147 FARTLSAPGDNYTDYVATRWYRAPELLVGDT  177 (396)
T ss_pred             hhHhhcCCcchhhhhhhhhhccChhhhcccC
Confidence            9998886655656778999999999998753

>KOG0581|consensus

Probab=99.97  E-value=1.1e-31  Score=229.92  Aligned_cols=161  Identities=24%  Similarity=0.410  Sum_probs=134.9

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.+.+..||+|..|+||+|.++.     ++|+.     ....+.+.+|+.+++.+.+        ++||.+|++|.    
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~s--------pyIV~~ygaF~----  147 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQS--------PYIVGFYGAFY----  147 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCC--------CCeeeEeEEEE----
Confidence            57888999999999999999853     44443     2235667899999999987        66999999998    


Q ss_pred             CCe-EEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        147 NGT-HVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       147 ~~~-~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      ... .++|+||||+ |+|...+...  +++++..+..++.+|+.||.|||. + +||||||||+||||+.. +.||||||
T Consensus       148 ~~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~-~IIHRDIKPsNlLvNsk-GeVKicDF  223 (364)
T KOG0581|consen  148 SNGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEER-KIIHRDIKPSNLLVNSK-GEVKICDF  223 (364)
T ss_pred             eCCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhcc-CeeeccCCHHHeeeccC-CCEEeccc
Confidence            444 6999999995 5555555443  359999999999999999999995 7 99999999999999765 99999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |.+......  ...+++||-.|||||.+.+..
T Consensus       224 GVS~~lvnS--~a~tfvGT~~YMsPERi~g~~  253 (364)
T KOG0581|consen  224 GVSGILVNS--IANTFVGTSAYMSPERISGES  253 (364)
T ss_pred             cccHHhhhh--hcccccccccccChhhhcCCc
Confidence            999987765  677999999999999998753

>KOG0661|consensus

Probab=99.97  E-value=2.2e-32  Score=240.13  Aligned_cols=168  Identities=27%  Similarity=0.435  Sum_probs=137.8

Q ss_pred             ceeccceEEEEEecccCceeEEEeccee--EEEecCCC--------ChhhHHHHHHHHhhh-cCCCCCcccchhcccccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSKT--QVLVSPQF--------PETALDEIKLLKCVR-DGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~--~~~~~~~~--------~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~  140 (284)
                      ..+.++|.++++||.|+||.||+|..+.  ...+.+.+        .-.-++|+..|++|. |        +||+++.+.
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~h--------pniikL~Ev   77 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPH--------PNIIKLKEV   77 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCC--------CcchhhHHH
Confidence            3456789999999999999999997632  11121121        122478999999998 6        779999998


Q ss_pred             ceEeccCCe-EEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGT-HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~-~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.    +.. .+|+|||||..+|++++..+ .+.|++..++.|+.||+.||+|+|.+ |+.|||+||||||+.. ...+|
T Consensus        78 i~----d~~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~-~~~iK  150 (538)
T KOG0661|consen   78 IR----DNDRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISG-NDVIK  150 (538)
T ss_pred             hh----ccCceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecc-cceeE
Confidence            87    555 99999999999999999987 46799999999999999999999999 9999999999999954 47999


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |+|||+|+....... -...+.|-+|.|||+|-+.-
T Consensus       151 iaDFGLARev~SkpP-YTeYVSTRWYRAPEvLLrs~  185 (538)
T KOG0661|consen  151 IADFGLAREVRSKPP-YTEYVSTRWYRAPEVLLRSG  185 (538)
T ss_pred             ecccccccccccCCC-cchhhhcccccchHHhhhcc
Confidence            999999987665422 22467899999999997654

>KOG0591|consensus

Probab=99.97  E-value=1.2e-32  Score=227.91  Aligned_cols=167  Identities=23%  Similarity=0.331  Sum_probs=137.4

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEe------cCCCChhhHHHHHHHHhhhcCCCCCcccchhcccccc-ceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLV------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD-FKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~-~~~~  144 (284)
                      +|+|+++||+|+||+||++....     +.|.      .....++...|+.+|+.|+|        |||++++.+ |.  
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H--------pNIVqYy~~~f~--   89 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH--------PNIVQYYAHSFI--   89 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC--------chHHHHHHHhhh--
Confidence            59999999999999999997632     1111      22335677899999999999        779999884 33  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCC-C--cEecCCCCCCeeEeeCCCcE
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKC-R--IIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-g--ivHrDiKp~NIll~~~~~~v  218 (284)
                       ....-++||||++ .|+|.+.+.+-  ..+.+++..+.+++.|+|.||..+|.++ .  |+||||||.||+|+. ++.+
T Consensus        90 -~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~-~gvv  167 (375)
T KOG0591|consen   90 -EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA-NGVV  167 (375)
T ss_pred             -ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC-CCce
Confidence             1334499999999 67777766653  2356999999999999999999999943 4  999999999999954 4899


Q ss_pred             EEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||.|||++++.........+.+|||.||+||.+.+.-
T Consensus       168 KLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~  204 (375)
T KOG0591|consen  168 KLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESG  204 (375)
T ss_pred             eeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCC
Confidence            9999999999999888889999999999999997653

>KOG0605|consensus

Probab=99.97  E-value=4.5e-31  Score=234.99  Aligned_cols=136  Identities=21%  Similarity=0.383  Sum_probs=117.0

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|.++.+||+|+||.||+|+.+.     ++|+..+       ..+.+..|..+|....+        +++|+||.+|. 
T Consensus       141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds--------~~vVKLyYsFQ-  211 (550)
T KOG0605|consen  141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDS--------PWVVKLYYSFQ-  211 (550)
T ss_pred             ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCC--------CcEEEEEEEec-
Confidence            579999999999999999998643     4444322       23456678888887666        78999999998 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +..++||||||+ ||++..++.+..  .+++..++.|+.+++.|++-||+. |+|||||||+|+||+.. |+++|.|
T Consensus       212 ---D~~~LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~-GHiKLSD  284 (550)
T KOG0605|consen  212 ---DKEYLYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAK-GHIKLSD  284 (550)
T ss_pred             ---CCCeeEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCC-CCEeecc
Confidence               999999999999 788888887765  599999999999999999999999 99999999999999555 9999999


Q ss_pred             ccchh
Q psy16752        223 LNATE  227 (284)
Q Consensus       223 fg~a~  227 (284)
                      ||+|.
T Consensus       285 FGLs~  289 (550)
T KOG0605|consen  285 FGLST  289 (550)
T ss_pred             ccccc
Confidence            99976

>KOG0192|consensus

Probab=99.97  E-value=4.5e-31  Score=234.44  Aligned_cols=164  Identities=24%  Similarity=0.339  Sum_probs=133.4

Q ss_pred             eEEEEEecccCceeEEEeccee----EEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT----QVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~----~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      ..+.+.||.|+||+||++.++.    +++.....      .+.+.+|+.+|.+++|        |||++++++..    .
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~H--------pNIV~f~G~~~----~  110 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRH--------PNIVQFYGACT----S  110 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCC--------CCeeeEEEEEc----C
Confidence            5566679999999999998854    33332211      3479999999999999        77999999775    4


Q ss_pred             Ce-EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC-cEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        148 GT-HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR-IIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       148 ~~-~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g-ivHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      .. .++|||||+ +|+|.+++.......+++..+..++.||+.||.|||++ + ||||||||+|||++.+..++||+|||
T Consensus       111 ~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~~~~~KI~DFG  189 (362)
T KOG0192|consen  111 PPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLKGKTLKIADFG  189 (362)
T ss_pred             CCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCCCCEEEECCCc
Confidence            44 699999999 77777777664345699999999999999999999999 9 99999999999996654499999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +++.............||++|||||++.+.
T Consensus       190 lsr~~~~~~~~~~~~~GT~~wMAPEv~~~~  219 (362)
T KOG0192|consen  190 LSREKVISKTSMTSVAGTYRWMAPEVLRGE  219 (362)
T ss_pred             cceeeccccccccCCCCCccccChhhhcCC
Confidence            998766543333347899999999999965

>KOG0600|consensus

Probab=99.97  E-value=3.4e-31  Score=234.18  Aligned_cols=166  Identities=22%  Similarity=0.356  Sum_probs=138.7

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEe------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLV------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +.|+.+++||+|+||.||+|++..     ++|.      .........+||.+|++|.|        +||++|.+.+.. 
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~H--------pNIikL~eivt~-  187 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDH--------PNIIKLEEIVTS-  187 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCC--------CcccceeeEEEe-
Confidence            468999999999999999998832     3322      23445667899999999999        679999887652 


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....+|+|+|||..+|..++.... -.|++.++++||.||+.||+|||++ ||+|||||..|||| ++.+.+||+|||
T Consensus       188 -~~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLi-dn~G~LKiaDFG  263 (560)
T KOG0600|consen  188 -KLSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILI-DNNGVLKIADFG  263 (560)
T ss_pred             -cCCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEE-cCCCCEEecccc
Confidence             2356899999999999998887643 3499999999999999999999999 99999999999999 455999999999


Q ss_pred             chhHhhhCCCCCC-cccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPV-SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~-~~~gt~~~~aPE~l~~~  254 (284)
                      +|++.......+. ..+-|.+|.+||.|-|.
T Consensus       264 LAr~y~~~~~~~~T~rVvTLWYRpPELLLG~  294 (560)
T KOG0600|consen  264 LARFYTPSGSAPYTSRVVTLWYRPPELLLGA  294 (560)
T ss_pred             ceeeccCCCCcccccceEEeeccChHHhcCC
Confidence            9998776655433 55789999999999774

>KOG0610|consensus

Probab=99.97  E-value=4.8e-30  Score=222.18  Aligned_cols=142  Identities=23%  Similarity=0.360  Sum_probs=124.2

Q ss_pred             ceeccceEEEEEecccCceeEEEeccee-----EEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .+--.+|++++.||.|.-|+||+|..+.     ++|+...       ...++..|..||..+.|        |.+++||.
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH--------PFlPTLYa  144 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH--------PFLPTLYA  144 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC--------Cccchhhh
Confidence            3334679999999999999999998754     5565332       34557789999999998        77999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v  218 (284)
                      .|+    ...+.|+||||| ||+|..+..++..+.+++..++.|+++|+.||+|||.. |||+|||||+|||| .++|+|
T Consensus       145 ~fe----t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILv-redGHI  218 (459)
T KOG0610|consen  145 SFE----TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILV-REDGHI  218 (459)
T ss_pred             eee----ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEE-ecCCcE
Confidence            998    899999999999 88888888888888899999999999999999999999 99999999999999 666999


Q ss_pred             EEEeccchh
Q psy16752        219 KTLALNATE  227 (284)
Q Consensus       219 ~l~Dfg~a~  227 (284)
                      .|.||.++.
T Consensus       219 MLsDFDLS~  227 (459)
T KOG0610|consen  219 MLSDFDLSL  227 (459)
T ss_pred             Eeeeccccc
Confidence            999999855

>KOG0694|consensus

Probab=99.97  E-value=5.3e-30  Score=233.94  Aligned_cols=166  Identities=21%  Similarity=0.300  Sum_probs=137.3

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      -.+|.++.+||+|.||.|++|..+     +++|+.++       ..+....|-+|+.....       ||.++.++..|.
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~-------HPFL~~L~~~fQ  439 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANR-------HPFLVNLFSCFQ  439 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhcc-------CCeEeecccccc
Confidence            357999999999999999999764     25555332       23556778888877762       477999999888


Q ss_pred             EeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        143 ICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                          +..++|+||||+.|+.+  +.....+.|++..++.|++.|+.||.|||++ ||||||||.+||||+.+ |+++|+|
T Consensus       440 ----T~~~l~fvmey~~Ggdm--~~~~~~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~e-Gh~kiAD  511 (694)
T KOG0694|consen  440 ----TKEHLFFVMEYVAGGDL--MHHIHTDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTE-GHVKIAD  511 (694)
T ss_pred             ----cCCeEEEEEEecCCCcE--EEEEecccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEccc-CcEEecc
Confidence                99999999999955442  2222234699999999999999999999999 99999999999999665 9999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+|+........++|+||||.|||||+|.+..
T Consensus       512 FGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~  544 (694)
T KOG0694|consen  512 FGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQS  544 (694)
T ss_pred             cccccccCCCCCccccccCChhhcChhhhccCc
Confidence            999998876667889999999999999998653

>KOG0658|consensus

Probab=99.96  E-value=1e-30  Score=223.58  Aligned_cols=169  Identities=21%  Similarity=0.335  Sum_probs=144.1

Q ss_pred             ceEEEEEecccCceeEEEecc-----eeEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC-CeE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN-GTH  150 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~-~~~  150 (284)
                      .|.-.+++|.|+||.||.|..     ..++|..-...+.-.+|+.+|+.+.|        +||+++..+|...... .-+
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~H--------pNIV~L~~~f~~~~~~d~~~   96 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDH--------PNIVRLLYFFSSSTESDEVY   96 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCC--------cCeeeEEEEEEecCCCchhH
Confidence            489999999999999999976     34666666666777899999999998        7799998888765544 346


Q ss_pred             EEEEeccCCccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        151 VCMVFEVLGHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       151 ~~iv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      +.+||||++.+|.+.+..-  .+..++.-.++-++.||++||.|||.. |||||||||.|+|++++.+.+||||||.|+.
T Consensus        97 lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~  175 (364)
T KOG0658|consen   97 LNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDTGVLKICDFGSAKV  175 (364)
T ss_pred             HHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCCCeEEeccCCccee
Confidence            7799999999999998852  234589999999999999999999999 9999999999999999999999999999999


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ..++... .+.-.|-.|.|||.+-+..
T Consensus       176 L~~~epn-iSYicSRyYRaPELifga~  201 (364)
T KOG0658|consen  176 LVKGEPN-ISYICSRYYRAPELIFGAT  201 (364)
T ss_pred             eccCCCc-eeEEEeccccCHHHHcCcc
Confidence            9888655 5666788999999987753

>KOG0659|consensus

Probab=99.96  E-value=4.8e-30  Score=210.80  Aligned_cols=164  Identities=25%  Similarity=0.408  Sum_probs=139.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .+|..++.||+|.||+||+|++.     +++|..      ......+++|+..|+.++|        +||+.+++.|.  
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h--------~nIi~LiD~F~--   71 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKH--------PNIIELIDVFP--   71 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccC--------cchhhhhhhcc--
Confidence            36889999999999999999883     233321      2234568999999999998        77999999887  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ....+.||+||+.-+|...+.... ..++..+++.|+.+++.||+|||.+ .|+||||||.|+|++++ +.+|++|||
T Consensus        72 --~~~~l~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~-g~lKiADFG  146 (318)
T KOG0659|consen   72 --HKSNLSLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSD-GQLKIADFG  146 (318)
T ss_pred             --CCCceEEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCC-CcEEeeccc
Confidence              888999999999988888876654 4699999999999999999999999 99999999999999655 999999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|+...+........+-|-+|.|||.|-|.
T Consensus       147 LAr~f~~p~~~~~~~V~TRWYRAPELLfGs  176 (318)
T KOG0659|consen  147 LARFFGSPNRIQTHQVVTRWYRAPELLFGS  176 (318)
T ss_pred             chhccCCCCcccccceeeeeccChHHhccc
Confidence            999988776555555889999999988663

>KOG0198|consensus

Probab=99.96  E-value=1.5e-29  Score=218.97  Aligned_cols=164  Identities=27%  Similarity=0.353  Sum_probs=135.2

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      +|...+.||+|+||+||++.+..     ++|.....    .+.+.+|+.+|..++|        ++||++++....   .
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~--------p~IV~~~G~~~~---~   86 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNH--------PNIVQYYGSSSS---R   86 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCC--------CCEEeeCCcccc---c
Confidence            48888999999999999998742     44444333    4558999999999998        679999995331   1


Q ss_pred             C-eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        148 G-THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       148 ~-~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      . ..++|+|||+ +|+|.+++.+..+ .+++..++.+.+||++||.|||++ |||||||||+||||+..++.++|+|||+
T Consensus        87 ~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~~~KlaDFG~  164 (313)
T KOG0198|consen   87 ENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNGDVKLADFGL  164 (313)
T ss_pred             cCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCCeEEeccCcc
Confidence            2 4799999999 7888888887765 699999999999999999999999 9999999999999976458999999999


Q ss_pred             hhHhhh---CCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAAT---GHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~---~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +.....   .......+.||+.|||||++..
T Consensus       165 a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~  195 (313)
T KOG0198|consen  165 AKKLESKGTKSDSELSVQGTPNYMAPEVIRN  195 (313)
T ss_pred             ccccccccccccccccccCCccccCchhhcC
Confidence            886663   1123446789999999999984

>KOG0663|consensus

Probab=99.96  E-value=9.2e-30  Score=215.14  Aligned_cols=170  Identities=22%  Similarity=0.293  Sum_probs=142.1

Q ss_pred             ceeccceEEEEEecccCceeEEEeccee-----EEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      +.--+.|+.++.|++|+||.||+|+++.     ++|..      ..+.-..++||.+|.+++|        +||+.+-+.
T Consensus        72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H--------~NIV~vkEV  143 (419)
T KOG0663|consen   72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARH--------PNIVEVKEV  143 (419)
T ss_pred             cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCC--------CCeeeeEEE
Confidence            3333569999999999999999999854     22221      2234557999999999998        668888776


Q ss_pred             ceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        141 FKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      +.  +..-+.+||||||+..+|..++..-. .+|...++++++.|++.||.|||.. .|+||||||+|+|+ .+.+.++|
T Consensus       144 Vv--G~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm-~~~G~lKi  218 (419)
T KOG0663|consen  144 VV--GSNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLL-SHKGILKI  218 (419)
T ss_pred             Ee--ccccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheee-ccCCcEEe
Confidence            53  55667799999999999988887765 4699999999999999999999999 99999999999999 55599999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||+|+..+.........+-|.+|.|||.|-+.
T Consensus       219 aDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~  252 (419)
T KOG0663|consen  219 ADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGA  252 (419)
T ss_pred             cccchhhhhcCCcccCcceEEEeeecCHHHhcCC
Confidence            9999999988876666677889999999999764

>KOG0597|consensus

Probab=99.96  E-value=3.5e-30  Score=230.41  Aligned_cols=165  Identities=23%  Similarity=0.399  Sum_probs=144.1

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|.+.+.||+|+||+||+|+.+.     +++...+.      ...+.+|+++++.++|        +||+.++++|+  
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH--------pniv~m~esfE--   71 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH--------PNIVEMLESFE--   71 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC--------cchhhHHHhhc--
Confidence            468899999999999999998865     33333222      2337899999999999        77999999999  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        +..++|+|+||+.|+|...+....  .++++.++.++.+++.||.|||+. +|+|||+||.|||+ ..++.+|+||||
T Consensus        72 --t~~~~~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl-~~~~~~KlcdFg  145 (808)
T KOG0597|consen   72 --TSAHLWVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILL-EKGGTLKLCDFG  145 (808)
T ss_pred             --ccceEEEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeee-cCCCceeechhh
Confidence              899999999999889999887765  499999999999999999999999 99999999999999 555999999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      +|+....+........|||-|||||.+.+.-.
T Consensus       146 ~Ar~m~~~t~vltsikGtPlYmAPElv~e~py  177 (808)
T KOG0597|consen  146 LARAMSTNTSVLTSIKGTPLYMAPELVEEQPY  177 (808)
T ss_pred             hhhhcccCceeeeeccCcccccCHHHHcCCCc
Confidence            99988887777778899999999999986543

>KOG0578|consensus

Probab=99.96  E-value=9.7e-30  Score=227.91  Aligned_cols=164  Identities=25%  Similarity=0.409  Sum_probs=140.0

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEe----cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLV----SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ..|....+||+|+-|.||.|....     +++.    .....+-++.|+.+|+..+|        +||+.+++.|.    
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H--------~NiVnfl~Syl----  340 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHH--------PNIVNFLDSYL----  340 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccc--------hHHHHHHHHhc----
Confidence            358889999999999999997622     2222    23345667899999999998        77999999987    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      -.+.+|+||||+ +|+|.+.+...   .+++.++..++++++.||.|||.+ ||+|||||.+|||++.+ +.+||.|||+
T Consensus       341 v~deLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~-g~vKltDFGF  415 (550)
T KOG0578|consen  341 VGDELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMD-GSVKLTDFGF  415 (550)
T ss_pred             ccceeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccC-CcEEEeeeee
Confidence            558899999999 66655555444   399999999999999999999999 99999999999999666 8899999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      |...........+.+|||+|||||+++++..
T Consensus       416 caqi~~~~~KR~TmVGTPYWMAPEVvtrk~Y  446 (550)
T KOG0578|consen  416 CAQISEEQSKRSTMVGTPYWMAPEVVTRKPY  446 (550)
T ss_pred             eeccccccCccccccCCCCccchhhhhhccc
Confidence            9999888888889999999999999998754

>KOG0611|consensus

Probab=99.96  E-value=1.6e-30  Score=224.73  Aligned_cols=167  Identities=23%  Similarity=0.389  Sum_probs=142.6

Q ss_pred             eeccceEEEEEecccCceeEEEeccee-----EEEec-------CCCChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVS-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      -+..+|.+.+.||.|.||.|-+|.++.     +++..       .+..-.+.+|+++|..|+|        |||+++|+.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNH--------PhII~IyEV  121 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNH--------PHIIQIYEV  121 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCC--------Cceeehhhh
Confidence            344689999999999999999998732     22221       1122346789999999999        779999999


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      |+    +.+.+.|||||. +|.|++++....  .+++..++.+|+||+.|+.|+|.+ +|||||||.+|||++.+ +.++
T Consensus       122 FE----NkdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENILLD~N-~NiK  193 (668)
T KOG0611|consen  122 FE----NKDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENILLDQN-NNIK  193 (668)
T ss_pred             hc----CCceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhc-cceecccchhheeecCC-CCee
Confidence            98    899999999999 899999998775  599999999999999999999999 99999999999999554 8999


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      |+|||++...... .+..++||+|-|.+||++++.=.
T Consensus       194 IADFGLSNly~~~-kfLqTFCGSPLYASPEIvNG~PY  229 (668)
T KOG0611|consen  194 IADFGLSNLYADK-KFLQTFCGSPLYASPEIVNGTPY  229 (668)
T ss_pred             eeccchhhhhccc-cHHHHhcCCcccCCccccCCCCC
Confidence            9999999887765 56669999999999999988643

>KOG0582|consensus

Probab=99.96  E-value=1.1e-28  Score=215.52  Aligned_cols=162  Identities=20%  Similarity=0.319  Sum_probs=136.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+|.+.+.||.|.-++||+|+..     +++|+.     ......+.+|+..|+.++|        |||++++..|.   
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~H--------PNIv~~~~sFv---   94 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDH--------PNIVTYHCSFV---   94 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCC--------CCcceEEEEEE---
Confidence            36999999999999999999762     344442     1224668899999999999        77999999887   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||+|| +|++++.+...-..++++..|..++++++.||.|||.+ |-||||||+.||||+.+ |.|+|.|||
T Consensus        95 -v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~d-G~VkLadFg  171 (516)
T KOG0582|consen   95 -VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSD-GTVKLADFG  171 (516)
T ss_pred             -ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCC-CcEEEcCce
Confidence             788999999999 88888888877666799999999999999999999999 99999999999999555 999999999


Q ss_pred             chhHhhhCCCCC----CcccCCCCccchhhh
Q psy16752        225 ATELAATGHKLP----VSFCSTAPVQEYSEL  251 (284)
Q Consensus       225 ~a~~~~~~~~~~----~~~~gt~~~~aPE~l  251 (284)
                      .+..........    .+++|||+|||||++
T Consensus       172 vsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl  202 (516)
T KOG0582|consen  172 VSASLFDSGDRQVTRFNTFVGTPCWMAPEVL  202 (516)
T ss_pred             eeeeecccCceeeEeeccccCcccccChHHh
Confidence            766444333222    467999999999994

>KOG0594|consensus

Probab=99.96  E-value=3.5e-29  Score=213.95  Aligned_cols=169  Identities=27%  Similarity=0.387  Sum_probs=137.3

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .|..+++||+|+||+||+|+.+.     +++..      ...+....+|+.+++.++|++       +|+.+++.+....
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~-------~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHAN-------HIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCc-------ceEEEEeeeeecc
Confidence            48888899999999999998743     33332      124566799999999999943       1888888776211


Q ss_pred             --cCCeEEEEEeccCCccHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        146 --VNGTHVCMVFEVLGHNLLKLIVKSKY--RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       146 --~~~~~~~iv~e~~~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                        .....+++|+||+..+|-.++.....  ..++...++.++.||+.||+|||++ +|+||||||+||||+. .+.+||+
T Consensus        85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~-~G~lKla  162 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISS-SGVLKLA  162 (323)
T ss_pred             cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECC-CCcEeee
Confidence              12338999999999999999988663  3588899999999999999999999 9999999999999966 5999999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|+...-+...-...++|.+|.|||+|-+.
T Consensus       163 DFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs  195 (323)
T KOG0594|consen  163 DFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGS  195 (323)
T ss_pred             ccchHHHhcCCcccccccEEEeeccCHHHhcCC
Confidence            999999666554445566799999999998775

>KOG0612|consensus

Probab=99.96  E-value=1.9e-29  Score=240.30  Aligned_cols=164  Identities=23%  Similarity=0.304  Sum_probs=136.0

Q ss_pred             ccceEEEEEecccCceeEEEecceeEEEe-----c-------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKTQVLV-----S-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~-----~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|.++++||+|+||.|.+++++.+-++     .       ......|..|..+|..-..        ++|++++.+|.
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns--------~Wiv~LhyAFQ  145 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNS--------EWIVQLHYAFQ  145 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCc--------HHHHHHHHHhc
Confidence            35799999999999999999988653222     1       1223445566677765554        89999999998


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          +..++|+||||+ ||+|+.++.+..  ++++.++++|+.+|+.||+-||+. |+|||||||+||||+.. |+++|+
T Consensus       146 ----D~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~-GHikLA  217 (1317)
T KOG0612|consen  146 ----DERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKS-GHIKLA  217 (1317)
T ss_pred             ----CccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEeccc-CcEeec
Confidence                999999999999 889999887765  699999999999999999999999 99999999999999655 999999


Q ss_pred             eccchhHhhh-CCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAAT-GHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~-~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||.|..... +.......+|||-|++||+|...
T Consensus       218 DFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~  251 (1317)
T KOG0612|consen  218 DFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQ  251 (1317)
T ss_pred             cchhHHhcCCCCcEEeccccCCCCccCHHHHHhh
Confidence            9998887764 44445577899999999999643

>KOG0588|consensus

Probab=99.96  E-value=8.5e-29  Score=225.07  Aligned_cols=162  Identities=28%  Similarity=0.476  Sum_probs=144.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      -|++.+.||.|+-|.|-+|++.     .++|++...       ...+.+|+-+|+.+.|        +|++.+|+.|+  
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H--------pnVl~LydVwe--   82 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH--------PNVLRLYDVWE--   82 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC--------CCeeeeeeeec--
Confidence            4999999999999999999883     367776665       6788999999999999        67999999998  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        +..++|+|+||+ +|.|++++.+.+  ++++.++..++.||+.|+.|||.. +||||||||+|+||+.. ..+||+||
T Consensus        83 --~~~~lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~-~nIKIADF  156 (786)
T KOG0588|consen   83 --NKQHLYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVK-NNIKIADF  156 (786)
T ss_pred             --cCceEEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhcc-cCEeeecc
Confidence              999999999999 999999999876  599999999999999999999999 99999999999999766 45999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |.|..-..+ ....+.||.|.|.|||++.|+-
T Consensus       157 GMAsLe~~g-klLeTSCGSPHYA~PEIV~G~p  187 (786)
T KOG0588|consen  157 GMASLEVPG-KLLETSCGSPHYAAPEIVSGRP  187 (786)
T ss_pred             ceeecccCC-ccccccCCCcccCCchhhcCCC
Confidence            998765554 6677899999999999998764

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.6e-27  Score=216.45  Aligned_cols=168  Identities=23%  Similarity=0.311  Sum_probs=135.2

Q ss_pred             ccceeccceEEEEEecccCceeEEEecce-------eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGSK-------TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-------~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .+.++..+|.+++.||.|+||.||+|...       .+++... ......+|+.+++.++|        ++|+++++.+.
T Consensus        86 ~~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~-~~~~~~~E~~il~~l~h--------~~iv~~~~~~~  156 (392)
T PHA03207         86 PASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVT-GGKTPGREIDILKTISH--------RAIINLIHAYR  156 (392)
T ss_pred             cchhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecc-ccccHHHHHHHHHhcCC--------CCccceeeeEe
Confidence            44555678999999999999999998641       2333322 23456789999999998        66899888776


Q ss_pred             EeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        143 ICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                          ....+|+|||++.+++++++...  ..+++..+..++.||+.||.|||++ |||||||||+|||++. .+.++|+|
T Consensus       157 ----~~~~~~lv~e~~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~~-~~~~~l~D  228 (392)
T PHA03207        157 ----WKSTVCMVMPKYKCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLDE-PENAVLGD  228 (392)
T ss_pred             ----eCCEEEEEehhcCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcC-CCCEEEcc
Confidence                67789999999999999988443  3599999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++.........  ...+.||+.|+|||++.+.
T Consensus       229 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  262 (392)
T PHA03207        229 FGAACKLDAHPDTPQCYGWSGTLETNSPELLALD  262 (392)
T ss_pred             CccccccCcccccccccccccccCccCHhHhcCC
Confidence            9998765443222  2356799999999998643

>KOG0032|consensus

Probab=99.95  E-value=2.2e-28  Score=218.89  Aligned_cols=165  Identities=28%  Similarity=0.471  Sum_probs=142.6

Q ss_pred             ceeccceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhh-cCCCCCcccchhcccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVR-DGDVNDPYRERVVQLL  138 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~  138 (284)
                      .-+...|.+.+.||+|.||.||+|..+     .++|+....       ...+.+|+.+|+.+. |        +||+.++
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~h--------pniv~l~  102 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGH--------PNIVQLK  102 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCC--------CCEEEEE
Confidence            334457999999999999999999873     345543222       247899999999998 5        7799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC--
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE--  215 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~--  215 (284)
                      ++|+    ....+++|||++ ||.|++.+...   .+++.++..++.|++.++.|||+. |||||||||+|+|+....  
T Consensus       103 ~~~e----~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L~~~~~~~  174 (382)
T KOG0032|consen  103 DAFE----DPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLLLASKDEG  174 (382)
T ss_pred             EEEE----cCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHeeeccccCC
Confidence            9998    788999999999 89999999887   299999999999999999999999 999999999999997553  


Q ss_pred             -CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        216 -ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       216 -~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                       +.++++|||++.+... .....+.+|||.|+|||++..
T Consensus       175 ~~~ik~~DFGla~~~~~-~~~~~~~~Gtp~y~APEvl~~  212 (382)
T KOG0032|consen  175 SGRIKLIDFGLAKFIKP-GERLHTIVGTPEYVAPEVLGG  212 (382)
T ss_pred             CCcEEEeeCCCceEccC-CceEeeecCCccccCchhhcC
Confidence             4899999999998887 566778999999999999984

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.95  E-value=1.5e-27  Score=219.64  Aligned_cols=170  Identities=20%  Similarity=0.278  Sum_probs=134.3

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec----
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG----  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~----  145 (284)
                      .++|++.+.||+|+||+||+|.+.     ++++..........+|+.+++.++|        +||+++++.+....    
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h--------~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNH--------INIIFLKDYYYTECFKKN  136 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCC--------CCCcceeeeEeecccccC
Confidence            357999999999999999999762     3555544445556789999999998        66888776653211    


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      ....++++||||+++++.+.+...  ....+++..++.++.||+.||.|||++ |||||||||+|||++.+++.++|+||
T Consensus       137 ~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             CCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEcCCCCceeeecc
Confidence            133468899999999888777542  234589999999999999999999999 99999999999999767678999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|....... ...+..||+.|+|||++.+.
T Consensus       216 Gla~~~~~~~-~~~~~~~t~~y~aPE~~~~~  245 (440)
T PTZ00036        216 GSAKNLLAGQ-RSVSYICSRFYRAPELMLGA  245 (440)
T ss_pred             ccchhccCCC-CcccCCCCcCccCHHHhcCC
Confidence            9998665432 23356789999999998653

>KOG0667|consensus

Probab=99.95  E-value=5.9e-28  Score=219.97  Aligned_cols=182  Identities=27%  Similarity=0.422  Sum_probs=151.9

Q ss_pred             CCcccccccceeccceEEEEEecccCceeEEEecce-----eEEEecCCCC---hhhHHHHHHHHhhhcCCCCCcccchh
Q psy16752         63 GGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFP---ETALDEIKLLKCVRDGDVNDPYRERV  134 (284)
Q Consensus        63 ~~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~i  134 (284)
                      ++.+.+..++.+..+|.|++.||+|+||.|.+|.+.     +++|+.+...   .....|+.+|..|+..  .....-|+
T Consensus       173 ~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~--d~~~~~n~  250 (586)
T KOG0667|consen  173 DGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKH--DPDDKYNI  250 (586)
T ss_pred             CCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhcc--CCCCCeeE
Confidence            344667777888889999999999999999999883     3666665544   4456689999998831  12223579


Q ss_pred             ccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        135 VQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       135 ~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      |++++.|.    ...++|||+|+++-+|.+++..+...+++...++.++.||+.||.+||.. +|||.|||||||||..-
T Consensus       251 Vrm~d~F~----fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL~~~  325 (586)
T KOG0667|consen  251 VRMLDYFY----FRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILLKDP  325 (586)
T ss_pred             EEeeeccc----cccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheeeccC
Confidence            99999988    89999999999999999999999998999999999999999999999999 99999999999999543


Q ss_pred             -CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        215 -EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 -~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                       ...||++|||+|.+.....   .+..-+-.|.|||++-|-
T Consensus       326 ~r~~vKVIDFGSSc~~~q~v---ytYiQSRfYRAPEVILGl  363 (586)
T KOG0667|consen  326 KRSRIKVIDFGSSCFESQRV---YTYIQSRFYRAPEVILGL  363 (586)
T ss_pred             CcCceeEEecccccccCCcc---eeeeeccccccchhhccC
Confidence             4599999999988776542   266778899999999764

>KOG0585|consensus

Probab=99.95  E-value=6.8e-29  Score=218.19  Aligned_cols=166  Identities=24%  Similarity=0.370  Sum_probs=131.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC------------------ChhhHHHHHHHHhhhcCCCCCcccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------------------PETALDEIKLLKCVRDGDVNDPYRE  132 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------------------~~~~~~E~~~l~~l~~~~~~~~~~~  132 (284)
                      +.|+++..||+|.||.|-+|.+.     +++|+....                  .+...+||.+|+++.|        +
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H--------~  168 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH--------P  168 (576)
T ss_pred             hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC--------c
Confidence            56999999999999999999872     355542221                  2578899999999999        6


Q ss_pred             hhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        133 RVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRG-IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       133 ~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      |||+|++...  .+..+.+|||+||+..+-....  ..... +++.+++.|+++++.||+|||.+ |||||||||.|+||
T Consensus       169 nVV~LiEvLD--DP~s~~~YlVley~s~G~v~w~--p~d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDIKPsNLLl  243 (576)
T KOG0585|consen  169 NVVKLIEVLD--DPESDKLYLVLEYCSKGEVKWC--PPDKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDIKPSNLLL  243 (576)
T ss_pred             CeeEEEEeec--CcccCceEEEEEeccCCccccC--CCCcccccHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEE
Confidence            7999998764  5677899999999943322222  11223 89999999999999999999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchhHhhhCC-----CCCCcccCCCCccchhhhhhcc
Q psy16752        212 CVDEARVKTLALNATELAATGH-----KLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~~~~~~~-----~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +.+ +++||.|||.+..+..+.     ......+|||.++|||...+..
T Consensus       244 ~~~-g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~  291 (576)
T KOG0585|consen  244 SSD-GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGN  291 (576)
T ss_pred             cCC-CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCC
Confidence            655 999999999988764332     1222468999999999997743

>KOG0580|consensus

Probab=99.95  E-value=3.9e-29  Score=202.66  Aligned_cols=166  Identities=23%  Similarity=0.376  Sum_probs=142.4

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|.+.+.||+|-||.||+|+.+.     ++|+..       .....+.+|+++...|+|        |||+++|++|. 
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~h--------pnilrlY~~fh-   92 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRH--------PNILRLYGYFH-   92 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCC--------ccHHhhhhhee-
Confidence            569999999999999999998853     444432       234556778888888887        77999999998 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +...+|+++||. .|.++..+......++++..+..++.|++.||.|+|.+ .||||||||+|+|++.. +.++++|
T Consensus        93 ---d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg~~-~~lkiAd  167 (281)
T KOG0580|consen   93 ---DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLGSA-GELKIAD  167 (281)
T ss_pred             ---ccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccCCC-CCeeccC
Confidence               899999999999 89999999866666799999999999999999999999 99999999999999655 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhccch
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      ||.+-...  .....+.|||.-|.+||+..+..-+
T Consensus       168 fGwsV~~p--~~kR~tlcgt~dyl~pEmv~~~~hd  200 (281)
T KOG0580|consen  168 FGWSVHAP--SNKRKTLCGTLDYLPPEMVEGRGHD  200 (281)
T ss_pred             CCceeecC--CCCceeeecccccCCHhhcCCCCcc
Confidence            99986555  3556789999999999999887654

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.95  E-value=5.6e-28  Score=217.22  Aligned_cols=162  Identities=20%  Similarity=0.310  Sum_probs=129.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++++.||+|+||+||+|.++     +++|+...       ....+..|+.++..+.|        ++|+++++.+.  
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~--------~~iv~~~~~~~--   71 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS--------LWVVKMFYSFQ--   71 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC--------CCcceEEEEEe--
Confidence            5999999999999999999763     34554322       12346678889988887        66999888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +|+|.+.+.+..  .+++..++.++.||+.||.|||++ ||+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~-~~~vkL~DF  145 (363)
T cd05628          72 --DKLNLYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDS-KGHVKLSDF  145 (363)
T ss_pred             --cCCeEEEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECC-CCCEEEeec
Confidence              778999999999 677888776543  599999999999999999999999 9999999999999955 489999999


Q ss_pred             cchhHhhhCC-----------------------------------CCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGH-----------------------------------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~-----------------------------------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.......                                   ....+.+||+.|+|||++.+.
T Consensus       146 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~  211 (363)
T cd05628         146 GLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT  211 (363)
T ss_pred             cCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC
Confidence            9986432210                                   011246899999999998553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.95  E-value=2e-27  Score=208.36  Aligned_cols=164  Identities=27%  Similarity=0.375  Sum_probs=133.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++.+.||+|+||+||+|.++     .++|+...     ....+.+|+.+++.+.|        +||+.+++.+.   
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~---   73 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKH--------ANIVLLHDIIH---   73 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCC--------CCcCeEEEEEe---
Confidence            46999999999999999999873     34444322     12356789999999988        66888888776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....|+||||+++++.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++|+|||+
T Consensus        74 -~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~-~~~~kl~Dfg~  149 (303)
T cd07869          74 -TKETLTLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISD-TGELKLADFGL  149 (303)
T ss_pred             -cCCeEEEEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECC-CCCEEECCCCc
Confidence             678899999999999998887654 3589999999999999999999999 9999999999999954 48899999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+|+.|+|||++.+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (303)
T cd07869         150 ARAKSVPSHTYSNEVVTLWYRPPDVLLGS  178 (303)
T ss_pred             ceeccCCCccCCCCcccCCCCChHHHcCC
Confidence            87544333333456789999999998653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.7e-27  Score=216.09  Aligned_cols=164  Identities=18%  Similarity=0.304  Sum_probs=133.9

Q ss_pred             ccceEEEEEecccCceeEEEeccee---EEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT---QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      .++|++++.||+|+||.||+|.+..   .+.++......+.+|+.+++.++|        +||+++++.|.    .....
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~H--------pnIv~~~~~~~----~~~~~  158 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINH--------PSIIQLKGTFT----YNKFT  158 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCC--------CCCCCEeEEEE----ECCee
Confidence            3569999999999999999998732   222333344567899999999998        67999998876    67789


Q ss_pred             EEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhh
Q psy16752        152 CMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAAT  231 (284)
Q Consensus       152 ~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~  231 (284)
                      |+|||++.++|...+....  .+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+|||++.....
T Consensus       159 ~lv~e~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~-~~vkL~DFG~a~~~~~  234 (391)
T PHA03212        159 CLILPRYKTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHP-GDVCLGDFGAACFPVD  234 (391)
T ss_pred             EEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCC-CCEEEEeCCccccccc
Confidence            9999999999988886643  589999999999999999999999 99999999999999544 8899999999865332


Q ss_pred             C-CCCCCcccCCCCccchhhhhhc
Q psy16752        232 G-HKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       232 ~-~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      . .......+||+.|+|||++.+.
T Consensus       235 ~~~~~~~~~~gt~~y~aPE~~~~~  258 (391)
T PHA03212        235 INANKYYGWAGTIATNAPELLARD  258 (391)
T ss_pred             ccccccccccCccCCCChhhhcCC
Confidence            2 1223356899999999998553

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.95  E-value=1.2e-27  Score=215.55  Aligned_cols=162  Identities=20%  Similarity=0.291  Sum_probs=131.4

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++.+.||+|+||.||+|.++     .++++...       ....+..|+.+++.+.|        ++|+++++.+.
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h--------p~iv~~~~~~~  113 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS--------PWVVQLFCAFQ  113 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC--------CCEeeEEEEEE
Confidence            357999999999999999999873     24444321       12346678999998888        66999998877


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ...++|+||||+ +|+|.+++...   .+++..++.++.||+.||.|||++ +|+||||||+|||++. .+.++|+
T Consensus       114 ----~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~~-~~~~kL~  184 (370)
T cd05621         114 ----DDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLDK-HGHLKLA  184 (370)
T ss_pred             ----cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECC-CCCEEEE
Confidence                788999999999 67787777543   389999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++........ ...+.+||+.|+|||++.+
T Consensus       185 DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  217 (370)
T cd05621         185 DFGTCMKMDETGMVRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             ecccceecccCCceecccCCCCcccCCHHHHhc
Confidence            9999876543322 2346689999999999865

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0589|consensus

Probab=99.95  E-value=1.3e-28  Score=218.72  Aligned_cols=169  Identities=27%  Similarity=0.384  Sum_probs=144.7

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|.+++++|+|+||.+++++++.     ++|.+      ......+..|+.+++++.|        |+|+.+.+.|.. 
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~h--------P~iv~y~ds~~~-   74 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLH--------PNIVEYKDSFEE-   74 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccC--------CCeeeeccchhc-
Confidence            469999999999999999998743     33321      2234567899999999998        669999998872 


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        .+.++||||+|+ ||++.+.+.+.++.-++++.+..|+.|++.||.|||+. .|+|||||+.||+++.+ ..|+|.||
T Consensus        75 --~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~-~~VkLgDf  150 (426)
T KOG0589|consen   75 --DGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKD-KKVKLGDF  150 (426)
T ss_pred             --CCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhcccc-Cceeecch
Confidence              444599999999 88888888887766799999999999999999999999 99999999999999776 67799999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhccch
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      |+|+...+......+..|||.||.||++.+.=..
T Consensus       151 GlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn  184 (426)
T KOG0589|consen  151 GLAKILNPEDSLASTVVGTPYYMCPEILSDIPYN  184 (426)
T ss_pred             hhhhhcCCchhhhheecCCCcccCHHHhCCCCCC
Confidence            9999999887788899999999999999876543

>KOG0033|consensus

Probab=99.95  E-value=3.8e-29  Score=203.57  Aligned_cols=167  Identities=26%  Similarity=0.352  Sum_probs=141.6

Q ss_pred             ceeccceEEEEEecccCceeEEEeccee-----------EEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSKT-----------QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~-----------~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ..+.+.|++.+.||+|.|+.|+++.++.           ..+......+.+.+|+++.+.|+|        |+|+++.+.
T Consensus         7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqH--------P~IvrL~~t   78 (355)
T KOG0033|consen    7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH--------PNIVRLHDS   78 (355)
T ss_pred             cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCC--------CcEeehhhh
Confidence            3455679999999999999999887632           122233456788999999999999        669999998


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCc
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EAR  217 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~  217 (284)
                      +.    ...+.|+|+|++ |+.|...+..+-  .+++..+..+++||++||.|+|.. +|||||+||+|+|+.+.  ...
T Consensus        79 i~----~~~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLASK~~~A~  151 (355)
T KOG0033|consen   79 IQ----EESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLASKAKGAA  151 (355)
T ss_pred             hc----ccceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeeeccCCCc
Confidence            87    788999999999 788888777663  489999999999999999999999 99999999999999755  469


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|++|||+|.... +......+.|||.|||||++...
T Consensus       152 vKL~~FGvAi~l~-~g~~~~G~~GtP~fmaPEvvrkd  187 (355)
T KOG0033|consen  152 VKLADFGLAIEVN-DGEAWHGFAGTPGYLSPEVLKKD  187 (355)
T ss_pred             eeecccceEEEeC-CccccccccCCCcccCHHHhhcC
Confidence            9999999999888 55677789999999999998643

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=3.1e-27  Score=213.36  Aligned_cols=135  Identities=19%  Similarity=0.336  Sum_probs=113.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++++.||+|+||.||+|.++     .++|+...       ....+.+|+.+++.+.|        ++|+++++.+.  
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h--------~~iv~~~~~~~--   71 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN--------EWVVKLYYSFQ--   71 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC--------CCcceEEEEEE--
Confidence            5999999999999999999863     34444321       23456789999999988        66899888777  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +|+|.+.+....  .+++..++.++.||+.||.|||++ ||+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~-~~~ikL~DF  145 (376)
T cd05598          72 --DKDNLYFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDR-DGHIKLTDF  145 (376)
T ss_pred             --cCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECC-CCCEEEEeC
Confidence              778999999999 677888776543  489999999999999999999999 9999999999999954 489999999


Q ss_pred             cchh
Q psy16752        224 NATE  227 (284)
Q Consensus       224 g~a~  227 (284)
                      |+|.
T Consensus       146 G~a~  149 (376)
T cd05598         146 GLCT  149 (376)
T ss_pred             CCCc
Confidence            9874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG4236|consensus

Probab=99.95  E-value=8.5e-28  Score=213.68  Aligned_cols=166  Identities=27%  Similarity=0.381  Sum_probs=143.1

Q ss_pred             eEE--EEEecccCceeEEEeccee-----EEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         78 YRV--TRKLGWGHFSTVWFTGSKT-----QVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        78 y~i--~~~LG~G~fg~Vy~a~~~~-----~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      |+|  .+.||.|.||+||-+.++.     ++|+..+      ....+..|+.+|..+.|        |+|+.+...|+  
T Consensus       564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H--------PGiV~le~M~E--  633 (888)
T KOG4236|consen  564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH--------PGIVNLECMFE--  633 (888)
T ss_pred             HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC--------CCeeEEEEeec--
Confidence            655  4789999999999988743     5555433      23557889999999998        66888888888  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcEEEEe
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARVKTLA  222 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v~l~D  222 (284)
                        +.+.+++|||-+.|+.++.+.....+++++...+.++.||+.||.|||.+ +|||.||||+|||+.+.  ...+||||
T Consensus       634 --T~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~FPQvKlCD  710 (888)
T KOG4236|consen  634 --TPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASPFPQVKLCD  710 (888)
T ss_pred             --CCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCCCCceeecc
Confidence              89999999999999999999998888899999999999999999999999 99999999999999654  45999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhccch
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      ||+|++.+.. ++..+.+|||.|.|||+|.++-..
T Consensus       711 FGfARiIgEk-sFRrsVVGTPAYLaPEVLrnkGyN  744 (888)
T KOG4236|consen  711 FGFARIIGEK-SFRRSVVGTPAYLAPEVLRNKGYN  744 (888)
T ss_pred             ccceeecchh-hhhhhhcCCccccCHHHHhhcccc
Confidence            9999987654 667789999999999999877543

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.95  E-value=2.2e-27  Score=214.81  Aligned_cols=135  Identities=21%  Similarity=0.355  Sum_probs=113.1

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|.+++.||+|+||+||+|.+.     .++++...       ....+.+|+.+++.+.|        ++|+++++.+.  
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h--------~~iv~~~~~~~--   71 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN--------EWVVRLYYSFQ--   71 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC--------CcCCeEEEEEE--
Confidence            5999999999999999999863     24444322       12356789999999988        67999998877  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +|+|.+.+.+..  .+++..++.++.||+.||.|||++ |||||||||+|||++. ++.++|+||
T Consensus        72 --~~~~~~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~-~g~~kL~DF  145 (382)
T cd05625          72 --DKDNLYFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDR-DGHIKLTDF  145 (382)
T ss_pred             --eCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECC-CCCEEEeEC
Confidence              778999999999 677888776543  589999999999999999999999 9999999999999955 489999999


Q ss_pred             cchh
Q psy16752        224 NATE  227 (284)
Q Consensus       224 g~a~  227 (284)
                      |++.
T Consensus       146 Gla~  149 (382)
T cd05625         146 GLCT  149 (382)
T ss_pred             CCCc
Confidence            9874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.2e-27  Score=213.35  Aligned_cols=137  Identities=22%  Similarity=0.347  Sum_probs=114.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++++.||.|+||+||+|.+.     +++|+...       ....+.+|+.++..+.|        ++|+++++.+.  
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--------~~iv~~~~~~~--   71 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN--------PWVVKLYYSFQ--   71 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--------CCCcceEEEEE--
Confidence            5999999999999999999873     34444321       12345679999999987        67999998877  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +|+|.+.+....  .+++..++.++.||+.||.|||+. ||+||||||+|||++. ++.++|+||
T Consensus        72 --~~~~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~-~~~~kl~Df  145 (364)
T cd05599          72 --DENYLYLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDA-KGHIKLSDF  145 (364)
T ss_pred             --cCCeEEEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECC-CCCEEEeec
Confidence              788999999999 667777776543  589999999999999999999999 9999999999999955 489999999


Q ss_pred             cchhHh
Q psy16752        224 NATELA  229 (284)
Q Consensus       224 g~a~~~  229 (284)
                      |++...
T Consensus       146 g~~~~~  151 (364)
T cd05599         146 GLCTGL  151 (364)
T ss_pred             ccceec
Confidence            988643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.95  E-value=2.8e-27  Score=205.99  Aligned_cols=163  Identities=26%  Similarity=0.363  Sum_probs=132.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++.+.||.|+||+||+|.++     .+++...     .....+.+|+.+++.++|        +||+++++.+.   
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~---   73 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH--------ANIVTLHDIIH---   73 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC--------CCEeeEEEEEc---
Confidence            36999999999999999999763     2444322     123456789999999988        66999988776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....++||||+.++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|||+
T Consensus        74 -~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~-~~~kl~DfG~  149 (288)
T cd07871          74 -TERCLTLVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEK-GELKLADFGL  149 (288)
T ss_pred             -CCCeEEEEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCC-CCEEECcCcc
Confidence             677899999999889888876543 3478999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............+++.|+|||++.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  177 (288)
T cd07871         150 ARAKSVPTKTYSNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             eeeccCCCccccCceecccccChHHhcC
Confidence            8755443333445678999999999865

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=5.1e-27  Score=210.59  Aligned_cols=163  Identities=28%  Similarity=0.405  Sum_probs=132.8

Q ss_pred             cceEEEEEecccCceeEEEeccee---EEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT---QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      .+|++++.||+|+||.||+|.+..   .+.+..........|+.+++.++|        +||+++++.+.    .....|
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~----~~~~~~  133 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNH--------PSVIRMKDTLV----SGAITC  133 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCC--------CCCcChhheEE----eCCeeE
Confidence            469999999999999999998732   222222334556789999999988        66999998876    677899


Q ss_pred             EEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhC
Q psy16752        153 MVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATG  232 (284)
Q Consensus       153 iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~  232 (284)
                      +|||++.+++.+++.... ..+++..+..++.||+.||.|||.+ |||||||||+|||++. .+.++|+|||++......
T Consensus       134 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~~~~~  210 (357)
T PHA03209        134 MVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFIND-VDQVCIGDLGAAQFPVVA  210 (357)
T ss_pred             EEEEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECC-CCCEEEecCccccccccC
Confidence            999999999998887644 3589999999999999999999999 9999999999999954 478999999998754322


Q ss_pred             CCCCCcccCCCCccchhhhhhc
Q psy16752        233 HKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       233 ~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                       ....+..||+.|+|||++.+.
T Consensus       211 -~~~~~~~gt~~y~aPE~~~~~  231 (357)
T PHA03209        211 -PAFLGLAGTVETNAPEVLARD  231 (357)
T ss_pred             -cccccccccccccCCeecCCC
Confidence             223356799999999988653

>KOG0690|consensus

Probab=99.95  E-value=2.6e-28  Score=205.90  Aligned_cols=164  Identities=22%  Similarity=0.336  Sum_probs=138.0

Q ss_pred             ccceEEEEEecccCceeEEEeccee-----EEEe-------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT-----QVLV-------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~-------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|..+++||+|.||.|-+++.+.     ++++       .+......+.|-++|+..+|        |.+..+-..|.
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~H--------PFLt~LKYsFQ  238 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRH--------PFLTSLKYSFQ  238 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccC--------cHHHHhhhhhc
Confidence            4579999999999999999998743     2222       22223445678889998888        55666666666


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ..+.+|+||||. ||.|+-.+.+..  .+++..++.+..+|+.||.|||++ +||.||||.+|+|++.| ++++|.
T Consensus       239 ----t~drlCFVMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkD-GHIKit  310 (516)
T KOG0690|consen  239 ----TQDRLCFVMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKD-GHIKIT  310 (516)
T ss_pred             ----cCceEEEEEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccC-CceEee
Confidence                899999999999 888887777654  699999999999999999999999 99999999999999655 999999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|+--........++||||.|.|||+|...
T Consensus       311 DFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDn  343 (516)
T KOG0690|consen  311 DFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDN  343 (516)
T ss_pred             ecccchhcccccceeccccCChhhcCchhhccc
Confidence            999999888877888999999999999999754

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.6e-27  Score=213.05  Aligned_cols=135  Identities=20%  Similarity=0.333  Sum_probs=113.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++++.||.|+||+||+|.++     +++|+...       ....+.+|+.+++.+.|        ++|+++++.+.  
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--------p~iv~~~~~~~--   71 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS--------PWVVSLYYSFQ--   71 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC--------CCcceEEEEEE--
Confidence            5999999999999999999763     34444321       12346678999998887        67999998877  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +++|.+.+....  .+++..++.++.|++.||.|||+. ||+||||||+|||++. .+.++++||
T Consensus        72 --~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~-~~~~kl~Df  145 (377)
T cd05629          72 --DAQYLYLIMEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDR-GGHIKLSDF  145 (377)
T ss_pred             --cCCeeEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECC-CCCEEEeec
Confidence              788999999999 778887776543  589999999999999999999999 9999999999999954 489999999


Q ss_pred             cchh
Q psy16752        224 NATE  227 (284)
Q Consensus       224 g~a~  227 (284)
                      |++.
T Consensus       146 Gla~  149 (377)
T cd05629         146 GLST  149 (377)
T ss_pred             cccc
Confidence            9885

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0584|consensus

Probab=99.95  E-value=1.2e-27  Score=216.75  Aligned_cols=170  Identities=24%  Similarity=0.357  Sum_probs=141.5

Q ss_pred             eccce-EEEEEecccCceeEEEecceeEE-------------EecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         74 FNNRY-RVTRKLGWGHFSTVWFTGSKTQV-------------LVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        74 ~~~~y-~i~~~LG~G~fg~Vy~a~~~~~~-------------~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      ..++| +....||+|+|-+||+|.+...-             ...+...+++..|+.+|+.|.|        +||+++|.
T Consensus        37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H--------~NIirfy~  108 (632)
T KOG0584|consen   37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKH--------PNIIRFYD  108 (632)
T ss_pred             CCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCC--------Cceeeeee
Confidence            34566 56789999999999999884411             1123334788999999999999        77999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcEecCCCCCCeeEeeCCCc
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC-RIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-givHrDiKp~NIll~~~~~~  217 (284)
                      .|..  .....+.+|+|++ .|+|..+..+.+  +++...++.|++||+.||.|||++. .|||||||.+||+|+-+.|.
T Consensus       109 SW~d--~~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~  184 (632)
T KOG0584|consen  109 SWVD--TDNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGE  184 (632)
T ss_pred             heec--CCCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCc
Confidence            9872  3446788999999 889988888765  5999999999999999999999986 69999999999999988999


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhccch
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      |||.|+|+|......  ......|||.+||||++...-++
T Consensus       185 VKIGDLGLAtl~r~s--~aksvIGTPEFMAPEmYEE~YnE  222 (632)
T KOG0584|consen  185 VKIGDLGLATLLRKS--HAKSVIGTPEFMAPEMYEENYNE  222 (632)
T ss_pred             eeecchhHHHHhhcc--ccceeccCccccChHHHhhhcch
Confidence            999999999877654  33347899999999999876554

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.95  E-value=4.3e-27  Score=209.74  Aligned_cols=160  Identities=23%  Similarity=0.341  Sum_probs=130.4

Q ss_pred             cceEEEEEecccCceeEEEecce------eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK------TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++.+.||+|+||.||+|.++      .+++...       .....+..|+.+++.++|        ++|+++++.+.
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~Iv~~~~~~~  101 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH--------PFCVNLYGSFK  101 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC--------CCCcceEEEEE
Confidence            46999999999999999999752      2333321       123456779999999988        66999998876


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|.+.+.+..  .+++..++.++.||+.||.|||+. ||+||||||+|||++. ++.++|+
T Consensus       102 ----~~~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~-~~~ikL~  173 (340)
T PTZ00426        102 ----DESYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLKPENLLLDK-DGFIKMT  173 (340)
T ss_pred             ----eCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECC-CCCEEEe
Confidence                778899999999 677877776543  589999999999999999999999 9999999999999954 5899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.....   ...+.+||+.|+|||++.+.
T Consensus       174 DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~  203 (340)
T PTZ00426        174 DFGFAKVVDT---RTYTLCGTPEYIAPEILLNV  203 (340)
T ss_pred             cCCCCeecCC---CcceecCChhhcCHHHHhCC
Confidence            9999875432   23466899999999998643

>KOG0579|consensus

Probab=99.95  E-value=1.6e-28  Score=222.15  Aligned_cols=168  Identities=23%  Similarity=0.323  Sum_probs=143.1

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEe----cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLV----SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.|.|+..||.|+||.||+|..+.     +.++    .....++++-||.+|..+.|        |+|+.|+++|.    
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdH--------P~ivkLl~ayy----   99 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDH--------PVIVKLLSAYY----   99 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCC--------hHHHHHHHHHh----
Confidence            358899999999999999998753     1122    12235778899999999998        77999999987    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....+||++|||+|+-.+.+.-.-++++.+.++..+++|+|.||.|||++ .|||||||..|||++.+ |.++|+|||.+
T Consensus       100 ~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~Tld-GdirLADFGVS  177 (1187)
T KOG0579|consen  100 FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLD-GDIRLADFGVS  177 (1187)
T ss_pred             ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEec-CcEeeeccccc
Confidence            67889999999977777776666667899999999999999999999999 99999999999999877 89999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhccch
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      ...........++.|||.|||||+...--++
T Consensus       178 AKn~~t~qkRDsFIGTPYWMAPEVvmCET~K  208 (1187)
T KOG0579|consen  178 AKNKSTRQKRDSFIGTPYWMAPEVVMCETFK  208 (1187)
T ss_pred             ccchhHHhhhccccCCcccccchheeecccc
Confidence            8777666677799999999999998665444

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.1e-27  Score=209.60  Aligned_cols=162  Identities=23%  Similarity=0.378  Sum_probs=132.8

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|.+.+.||+|+||+||+|.+.     +++|+..       .....+..|+.++..+.|        ++++++++.+.  
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~--   71 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS--------PWIVKLYYSFQ--   71 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC--------CCccchhhhee--
Confidence            6999999999999999999874     3444432       223456778999998887        66899888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +++|.+.+...  ..+++..++.++.||+.||.|||.. ||+||||||+|||++.+ +.++|+||
T Consensus        72 --~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~-~~~kL~Df  145 (350)
T cd05573          72 --DEEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDAD-GHIKLADF  145 (350)
T ss_pred             --cCCeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCC-CCEEeecC
Confidence              788999999999 67888877665  3599999999999999999999999 99999999999999554 89999999


Q ss_pred             cchhHhhhCC-----------------------------CCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGH-----------------------------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~-----------------------------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.......                             .......||+.|+|||++.+.
T Consensus       146 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  205 (350)
T cd05573         146 GLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT  205 (350)
T ss_pred             CCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence            9987655433                             123356799999999998665

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.95  E-value=5e-27  Score=208.33  Aligned_cols=160  Identities=21%  Similarity=0.354  Sum_probs=131.5

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|.+.+.||+|+||.||+|.++     .++|+...       ..+.+.+|+.+++.+.|        ++|+++++.+. 
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~-   88 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH--------PFIVNMMCSFQ-   88 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC--------CCCCcEEEEEE-
Confidence            46999999999999999999873     34444321       23457789999999988        66999998776 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|
T Consensus        89 ---~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~-~~~~kl~D  161 (329)
T PTZ00263         89 ---DENRVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDN-KGHVKVTD  161 (329)
T ss_pred             ---cCCEEEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECC-CCCEEEee
Confidence               778999999999 677877776543  589999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++......   ..+.+||+.|+|||++.+.
T Consensus       162 fg~~~~~~~~---~~~~~gt~~y~aPE~~~~~  190 (329)
T PTZ00263        162 FGFAKKVPDR---TFTLCGTPEYLAPEVIQSK  190 (329)
T ss_pred             ccCceEcCCC---cceecCChhhcCHHHHcCC
Confidence            9998755322   2356899999999998654

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.94  E-value=3.9e-27  Score=208.49  Aligned_cols=157  Identities=21%  Similarity=0.317  Sum_probs=126.0

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||.||+|.++     +++|+...       ....+.+|+.+++.+.|        ++|+.+++.+.    ...
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------p~i~~~~~~~~----~~~   68 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH--------PFLTALKYSFQ----THD   68 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC--------CCCCCEEEEEE----cCC
Confidence            36899999999999763     34454321       12345678999999888        66888888776    778


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|||++..
T Consensus        69 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~-~~~~kl~DfG~a~~  144 (323)
T cd05571          69 RLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDK-DGHIKITDFGLCKE  144 (323)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECC-CCCEEEeeCCCCcc
Confidence            999999999 667777776543  589999999999999999999999 9999999999999955 48899999999876


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...........+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~gt~~y~aPE~~~~~  170 (323)
T cd05571         145 GISDGATMKTFCGTPEYLAPEVLEDN  170 (323)
T ss_pred             cccCCCcccceecCccccChhhhcCC
Confidence            44443444567899999999998653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00284 protein kinase; Provisional

Probab=99.94  E-value=5.5e-26  Score=210.86  Aligned_cols=169  Identities=26%  Similarity=0.378  Sum_probs=130.9

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .++|++++.||+|+||+||+|.+.     +++|+...   .......|+.+++.+++.+..+  +.+++.++.+|.   .
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~--~~~i~~i~~~~~---~  202 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPAD--RFPLMKIQRYFQ---N  202 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCccc--CcceeeeEEEEE---c
Confidence            468999999999999999999762     35555432   2345677999999998865332  234666666554   2


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCC---------
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEA---------  216 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~---------  216 (284)
                      ...++|+||++++++|++.+.+..  .+++..+..++.||+.||.|||+ . |||||||||+|||++.++.         
T Consensus       203 ~~~~~~iv~~~~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~-gIiHrDlKP~NILl~~~~~~~~~~~~~~  279 (467)
T PTZ00284        203 ETGHMCIVMPKYGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTEL-HLMHTDLKPENILMETSDTVVDPVTNRA  279 (467)
T ss_pred             CCceEEEEEeccCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEecCCcccccccccc
Confidence            456899999999999999887653  59999999999999999999997 6 9999999999999965432         


Q ss_pred             ------cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 ------RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ------~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                            .++|+|||.+....   ......+||+.|+|||++.+.
T Consensus       280 ~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~  320 (467)
T PTZ00284        280 LPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGL  320 (467)
T ss_pred             cCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcC
Confidence                  59999999875322   223356899999999998654

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.4e-27  Score=207.87  Aligned_cols=159  Identities=19%  Similarity=0.321  Sum_probs=130.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||.||+|.+.     +++|+...       ....+..|+.++..+.|        ++|+++++.+.  
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h--------~~iv~~~~~~~--   71 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS--------EWLVKLLYAFQ--   71 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC--------CCCccEEEEEE--
Confidence            5999999999999999999863     24444321       22446778999998887        66899888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +++|.+.+....  .+++..++.++.||+.||.|||+. ||+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~-~~~~kL~Df  145 (333)
T cd05600          72 --DDEYLYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDA-SGHIKLTDF  145 (333)
T ss_pred             --cCCEEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECC-CCCEEEEeC
Confidence              778999999999 677777775543  589999999999999999999999 9999999999999955 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.....   .....+||+.|+|||++.+.
T Consensus       146 g~a~~~~~---~~~~~~gt~~y~aPE~~~~~  173 (333)
T cd05600         146 GLSKGIVT---YANSVVGSPDYMAPEVLRGK  173 (333)
T ss_pred             cCCccccc---ccCCcccCccccChhHhcCC
Confidence            99875543   33456799999999997654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.94  E-value=6.3e-27  Score=211.75  Aligned_cols=135  Identities=21%  Similarity=0.363  Sum_probs=113.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .|++++.||+|+||+||+|.++     +++|+...       ....+.+|+.+++.+.|        ++|+++++.+.  
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h--------~~iv~l~~~~~--   71 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN--------EWVVKLYYSFQ--   71 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC--------CCeeeeEEEEe--
Confidence            4899999999999999999762     34444322       12346789999999988        67999998877  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +|+|.+.+.+..  .+++..++.++.||+.||.|||.. ||+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~-~~~~kL~DF  145 (381)
T cd05626          72 --DKDNLYFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDL-DGHIKLTDF  145 (381)
T ss_pred             --cCCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECC-CCCEEEeeC
Confidence              778999999999 677877776543  589999999999999999999999 9999999999999955 489999999


Q ss_pred             cchh
Q psy16752        224 NATE  227 (284)
Q Consensus       224 g~a~  227 (284)
                      |++.
T Consensus       146 Gl~~  149 (381)
T cd05626         146 GLCT  149 (381)
T ss_pred             cCCc
Confidence            9875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.94  E-value=7.4e-27  Score=209.70  Aligned_cols=162  Identities=20%  Similarity=0.316  Sum_probs=128.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++++.||+|+||+||+|.++     +++++...       ....+..|+.++..+.|        ++++++++.+.  
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~iv~~~~~~~--   71 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG--------AWVVKMFYSFQ--   71 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC--------CCEeeEEEEEE--
Confidence            5999999999999999999763     24444321       22446678888888887        66888888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +++|.+.+.+..  .+++..++.++.|++.||.|||+. ||+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~-~~~vkL~Df  145 (360)
T cd05627          72 --DKRNLYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDA-KGHVKLSDF  145 (360)
T ss_pred             --cCCEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECC-CCCEEEeec
Confidence              788999999999 677777776543  589999999999999999999999 9999999999999955 489999999


Q ss_pred             cchhHhhhCC-----------------------------------CCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGH-----------------------------------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~-----------------------------------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.......                                   ....+.+||+.|+|||++.+.
T Consensus       146 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~  211 (360)
T cd05627         146 GLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT  211 (360)
T ss_pred             cCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC
Confidence            9876432211                                   011245799999999997543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=8.1e-27  Score=203.44  Aligned_cols=159  Identities=21%  Similarity=0.301  Sum_probs=130.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||+||+|.++     .++++...       ..+.+.+|+.+++.+.|        ++|+++++.+.  
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~--   71 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH--------PFIIRLFWTEH--   71 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC--------CcHhhhHhhhc--
Confidence            5999999999999999999874     24444321       22446789999999988        66999888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~-~~~~kl~Df  145 (291)
T cd05612          72 --DQRFLYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDK-EGHIKLTDF  145 (291)
T ss_pred             --cCCeEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECC-CCCEEEEec
Confidence              778999999999 678888776543  589999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++......   ....+||+.|+|||++.+.
T Consensus       146 g~~~~~~~~---~~~~~gt~~y~aPE~~~~~  173 (291)
T cd05612         146 GFAKKLRDR---TWTLCGTPEYLAPEVIQSK  173 (291)
T ss_pred             CcchhccCC---cccccCChhhcCHHHHcCC
Confidence            998765432   2356799999999998654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.94  E-value=8.5e-27  Score=206.93  Aligned_cols=163  Identities=20%  Similarity=0.306  Sum_probs=129.3

Q ss_pred             ceEEEEEecccCceeEEEecce--------eEEEecCC--------CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQ--------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      +|++.+.||+|+||+||+|...        +++++...        ..+.+..|+.+++.+.+       |++|+.+++.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-------~~~i~~~~~~   73 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQ-------SPFLVTLHYA   73 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccC-------CCCcccEEEE
Confidence            3899999999999999988652        24444321        12345678889988864       3678888887


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.    ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++
T Consensus        74 ~~----~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~~-~~~k  145 (332)
T cd05614          74 FQ----TEAKLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDSE-GHVV  145 (332)
T ss_pred             Ee----cCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECCC-CCEE
Confidence            76    778899999999 678888776543  489999999999999999999999 99999999999999654 7999


Q ss_pred             EEeccchhHhhhCC-CCCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGH-KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~-~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++....... ......+||+.|+|||++.+.
T Consensus       146 l~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  181 (332)
T cd05614         146 LTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGK  181 (332)
T ss_pred             EeeCcCCccccccCCCccccccCCccccCHHHhcCC
Confidence            99999987543332 223356899999999998654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.94  E-value=6.8e-27  Score=210.85  Aligned_cols=163  Identities=21%  Similarity=0.295  Sum_probs=130.3

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++.+.||+|+||.||+|.++     .++++...       ....+..|+.+++.++|        ++|+++++.+.
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h--------p~iv~~~~~~~  113 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS--------PWVVQLFYAFQ  113 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC--------CCCCeEEEEEE
Confidence            357999999999999999999873     24444321       12335678888888887        66899888776


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ...++|+||||+ +++|.+++...   .+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++|+
T Consensus       114 ----~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~-~~~ikL~  184 (371)
T cd05622         114 ----DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDK-SGHLKLA  184 (371)
T ss_pred             ----cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECC-CCCEEEE
Confidence                778999999999 66777766543   389999999999999999999999 9999999999999955 4899999


Q ss_pred             eccchhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++........ ...+.+||+.|+|||++.+.
T Consensus       185 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~  218 (371)
T cd05622         185 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ  218 (371)
T ss_pred             eCCceeEcCcCCcccccCcccCccccCHHHHhcc
Confidence            9999876543322 23366799999999998653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=8.8e-27  Score=206.27  Aligned_cols=163  Identities=23%  Similarity=0.280  Sum_probs=128.2

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++++.||+|+||.||+|.++     +++|+...       ..+.+..|..++..+.|+       ++++.+++.+.  
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-------~~i~~~~~~~~--   71 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP-------PFLTQLHSCFQ--   71 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC-------CceeeeEEEEE--
Confidence            4899999999999999999763     34554321       223456788888877762       44777777665  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+||
T Consensus        72 --~~~~~~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~-~~~~kL~Df  145 (324)
T cd05587          72 --TMDRLYFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDA-EGHIKIADF  145 (324)
T ss_pred             --cCCEEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcC-CCCEEEeec
Confidence              677899999999 677777775543  489999999999999999999999 9999999999999955 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.............+||+.|+|||++.+.
T Consensus       146 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  176 (324)
T cd05587         146 GMCKENIFGGKTTRTFCGTPDYIAPEIIAYQ  176 (324)
T ss_pred             CcceecCCCCCceeeecCCccccChhhhcCC
Confidence            9986543333334466899999999998654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG2052|consensus

Probab=99.94  E-value=7.6e-27  Score=203.90  Aligned_cols=199  Identities=16%  Similarity=0.203  Sum_probs=161.9

Q ss_pred             cCCCcCCCCCCcccccccceeccceEEEEEecccCceeEEEeccee---EEEecC-CCChhhHHHHHHHHh--hhcCCCC
Q psy16752         54 QEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKT---QVLVSP-QFPETALDEIKLLKC--VRDGDVN  127 (284)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~~~-~~~~~~~~E~~~l~~--l~~~~~~  127 (284)
                      -++....+++...|+-+...+....++++.||+|.||+||+|.++.   ++|+.. .....+.+|.+++..  |+|    
T Consensus       189 l~~~~tSGSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRH----  264 (513)
T KOG2052|consen  189 LDDLETSGSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRH----  264 (513)
T ss_pred             HHhhccCCCCCCchhHhHHhhhheeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhcc----
Confidence            3455577788888999988888899999999999999999999854   666543 345667888888875  566    


Q ss_pred             CcccchhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------Cc
Q psy16752        128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC-------RI  199 (284)
Q Consensus       128 ~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------gi  199 (284)
                          +||+.++++-......-..+|+|++|. .|+|++++.+..   ++.....+++..++.||.+||...       .|
T Consensus       265 ----ENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t---v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaI  337 (513)
T KOG2052|consen  265 ----ENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT---VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAI  337 (513)
T ss_pred             ----chhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc---CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchh
Confidence                789999987654444557899999999 899999998854   999999999999999999999643       59


Q ss_pred             EecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC----CCCcccCCCCccchhhhhhccchhhHHHhH
Q psy16752        200 IHTDIKPENVLLCVDEARVKTLALNATELAATGHK----LPVSFCSTAPVQEYSELSRRMSKNKKKKLK  264 (284)
Q Consensus       200 vHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~~~~~~~~~~~~  264 (284)
                      .|||||+.||||.. ++.+.|+|||+|-.......    .+...+||-.|||||+|...++.+-=..||
T Consensus       338 AHRDlKSKNILVKk-n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk  405 (513)
T KOG2052|consen  338 AHRDLKSKNILVKK-NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYK  405 (513)
T ss_pred             hccccccccEEEcc-CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhh
Confidence            99999999999954 59999999999876554421    233568999999999999999876655554

>KOG0577|consensus

Probab=99.94  E-value=1.5e-28  Score=220.82  Aligned_cols=157  Identities=24%  Similarity=0.337  Sum_probs=131.3

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEe-------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLV-------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~-------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .|.-++.||.|+||.||.|++..     +++.       ....++++++|+..|+.++|        ||++.+-++|-  
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H--------PntieYkgCyL--   96 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH--------PNTIEYKGCYL--   96 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC--------CCcccccceee--
Confidence            47888999999999999998732     2222       12236789999999999999        66888888776  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        .....|+|||||-|+-.+.+.-.. +++.+-.|..|+.+.+.||.|||+. +.||||||..|||+ .+.+.|+++|||
T Consensus        97 --re~TaWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILL-se~g~VKLaDFG  171 (948)
T KOG0577|consen   97 --REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILL-SEPGLVKLADFG  171 (948)
T ss_pred             --ccchHHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEe-cCCCeeeecccc
Confidence              777889999999776666665544 3589999999999999999999999 99999999999999 555999999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      .|....+.    .+|+|||.||||||+-
T Consensus       172 SAsi~~PA----nsFvGTPywMAPEVIL  195 (948)
T KOG0577|consen  172 SASIMAPA----NSFVGTPYWMAPEVIL  195 (948)
T ss_pred             chhhcCch----hcccCCccccchhHhe
Confidence            98876654    3889999999999984

>KOG1989|consensus

Probab=99.94  E-value=3.4e-27  Score=221.06  Aligned_cols=175  Identities=21%  Similarity=0.285  Sum_probs=135.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEe----cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe--
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLV----SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC--  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~--  144 (284)
                      .+++|.+.|.+|||+.||+|.+.     +++|.    .....+.+.+|+.+|+.|..       |+|||.+++.....  
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~g-------h~nIV~yidss~~~~~  109 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSG-------HKNIVSYIDSSAINRS  109 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcC-------CCceeeEecccccccc
Confidence            57899999999999999999872     23332    23345667899999999985       48899999943221  


Q ss_pred             ccC-CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCeeEeeCCCcEEE
Q psy16752        145 GVN-GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       145 ~~~-~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIll~~~~~~v~l  220 (284)
                      +.. .-.++|+|||| +|+|.+++..+...+|++..+++|+.++|+||.+||.. .  |||||||-|||||..+ +..||
T Consensus       110 ~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~-g~~KL  187 (738)
T KOG1989|consen  110 SNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSAD-GNYKL  187 (738)
T ss_pred             CCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCC-CCEEe
Confidence            222 46788999999 58999999977666799999999999999999999997 6  9999999999999544 89999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccch-hhhhhccchhhHHHhHHHHHHHHHHH
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEY-SELSRRMSKNKKKKLKKKAKKENEML  274 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aP-E~l~~~~~~~~~~~~~~~~~~~~~~~  274 (284)
                      ||||.+.-               +...| ..-...+-+....++++.+||+|||.
T Consensus       188 CDFGSatt---------------~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMI  227 (738)
T KOG1989|consen  188 CDFGSATT---------------KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMI  227 (738)
T ss_pred             Cccccccc---------------ccCCCccHHHHHHHHHHHHhhCCccccChHHH
Confidence            99998742               12222 23344455666777777777777775

>KOG0574|consensus

Probab=99.94  E-value=1.1e-28  Score=206.21  Aligned_cols=165  Identities=19%  Similarity=0.286  Sum_probs=142.3

Q ss_pred             eEEEEEecccCceeEEEeccee-----EEEec--CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT-----QVLVS--PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      |.++.+||+|+||.||+|.++.     +++.+  ....+.+.+|+.++.++..        +.++++|+.+.    ....
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S--------~yVVKYYGSYF----K~sD  102 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKS--------KYVVKYYGSYF----KHSD  102 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCC--------chhhhhhhhhc----cCCc
Confidence            7888999999999999998853     33332  3345778899999999998        66999999887    7888


Q ss_pred             EEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        151 VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       151 ~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      +||||||||.+....+.+.+.+++++..+..+++..+.||.|||.. .-||||||..|||++.+ +..+++|||.|....
T Consensus       103 LWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~-G~AKLADFGVAGQLT  180 (502)
T KOG0574|consen  103 LWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTD-GIAKLADFGVAGQLT  180 (502)
T ss_pred             eEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEccc-chhhhhhccccchhh
Confidence            9999999976666666666667899999999999999999999999 99999999999999555 999999999999888


Q ss_pred             hCCCCCCcccCCCCccchhhhhhccc
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      .......++.|||.|||||++...-.
T Consensus       181 DTMAKRNTVIGTPFWMAPEVI~EIGY  206 (502)
T KOG0574|consen  181 DTMAKRNTVIGTPFWMAPEVIEEIGY  206 (502)
T ss_pred             hhHHhhCccccCcccccHHHHHHhcc
Confidence            87777789999999999999976543

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=1.1e-26  Score=209.38  Aligned_cols=161  Identities=21%  Similarity=0.292  Sum_probs=129.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||+||+|.++     .++++...       ....+..|+.+++.++|        ++|+++++.+. 
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h--------~~iv~~~~~~~-  113 (370)
T cd05596          43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS--------EWIVQLHYAFQ-  113 (370)
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC--------CCcceEEEEEe-
Confidence            46999999999999999999763     34444321       12335678999998887        66888888776 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ...++|+||||+ +|+|.+.+...   .+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|
T Consensus       114 ---~~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~-~~~~kL~D  185 (370)
T cd05596         114 ---DDKYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDK-SGHLKLAD  185 (370)
T ss_pred             ---cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcC-CCCEEEEe
Confidence               788999999999 66777766443   389999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++........ ...+.+||+.|+|||++.+
T Consensus       186 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  217 (370)
T cd05596         186 FGTCMKMDANGMVRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             ccceeeccCCCcccCCCCCCCcCeECHHHhcc
Confidence            999876543322 2335679999999998854

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0197|consensus

Probab=99.94  E-value=1.8e-27  Score=212.34  Aligned_cols=164  Identities=23%  Similarity=0.319  Sum_probs=133.2

Q ss_pred             ceEEEEEecccCceeEEEeccee----EE---EecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT----QV---LVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~----~~---~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .+++++.||+|-||.||++.++.    ++   +......+.+.+|+.+|++|+|        ++|++++++..    .+.
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H--------~~lV~l~gV~~----~~~  274 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRH--------EKLVKLYGVCT----KQE  274 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcc--------cCeEEEEEEEe----cCC
Confidence            36778899999999999998743    22   2333456889999999999999        77999999776    556


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+||||||+ .|+|++++....+..+...+.+.++.|||+|++||+++ ++|||||.+.||||+. +..|||+|||+|+.
T Consensus       275 piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~-~~~vKIsDFGLAr~  352 (468)
T KOG0197|consen  275 PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDE-DLVVKISDFGLARL  352 (468)
T ss_pred             ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-Cccchhhhhhheeecc-CceEEEcccccccc
Confidence            799999999 89999999885556799999999999999999999999 9999999999999954 48999999999994


Q ss_pred             hhhCCCCCCcc--cCCCCccchhhhhhcc
Q psy16752        229 AATGHKLPVSF--CSTAPVQEYSELSRRM  255 (284)
Q Consensus       229 ~~~~~~~~~~~--~gt~~~~aPE~l~~~~  255 (284)
                      ...+. .....  ..-.-|.|||++....
T Consensus       353 ~~d~~-Y~~~~~~kfPIkWtAPEa~~~~~  380 (468)
T KOG0197|consen  353 IGDDE-YTASEGGKFPIKWTAPEALNYGK  380 (468)
T ss_pred             cCCCc-eeecCCCCCCceecCHHHHhhCC
Confidence            44332 22222  2344589999996543

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.94  E-value=1.4e-26  Score=205.59  Aligned_cols=162  Identities=19%  Similarity=0.271  Sum_probs=129.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||+||++.++     +++++...       ....+..|+.++..+.|        ++|+.+++.+.  
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~l~~~~~--   71 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC--------QWITTLHYAFQ--   71 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEE--
Confidence            6999999999999999999863     34444322       12235667788877776        66888888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +|+|.+++.... ..+++..+..++.|++.||.|||++ ||+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~-~~~~kl~Df  146 (331)
T cd05624          72 --DENYLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDM-NGHIRLADF  146 (331)
T ss_pred             --cCCEEEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcC-CCCEEEEec
Confidence              788999999999 778887776533 3589999999999999999999999 9999999999999954 478999999


Q ss_pred             cchhHhhhCCCC-CCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKL-PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~-~~~~~gt~~~~aPE~l~~  253 (284)
                      |++......... ....+||+.|+|||++.+
T Consensus       147 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05624         147 GSCLKMNQDGTVQSSVAVGTPDYISPEILQA  177 (331)
T ss_pred             cceeeccCCCceeeccccCCcccCCHHHHhc
Confidence            998765443322 224579999999998864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0586|consensus

Probab=99.94  E-value=6.7e-27  Score=211.48  Aligned_cols=163  Identities=21%  Similarity=0.412  Sum_probs=141.7

Q ss_pred             ceEEEEEecccCceeEEEecc-----eeEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .|.+...||.|.|+.|.+|.+     .++++...+.      .+.+.+|+.+|+.++|        |||++++...+   
T Consensus        57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~H--------PnIvkl~~v~~---  125 (596)
T KOG0586|consen   57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNH--------PNIVKLFSVIE---  125 (596)
T ss_pred             ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCC--------cceeeeeeeee---
Confidence            499999999999999999987     3355554332      3457899999999999        77999999887   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +|.+++++.+..  ++.+..++.++.|++.|++|||++ .|||||||++||||+.+ ..++|+|||
T Consensus       126 -t~~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~-mnikIaDfg  200 (596)
T KOG0586|consen  126 -TEATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDEN-MNIKIADFG  200 (596)
T ss_pred             -ecceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccc-cceeeeccc
Confidence             889999999999 889999998875  578899999999999999999999 99999999999999555 779999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      ++.++..+ ....++||++||.|||++.++-.
T Consensus       201 fS~~~~~~-~~lqt~cgsppyAaPEl~~g~~y  231 (596)
T KOG0586|consen  201 FSTFFDYG-LMLQTFCGSPPYAAPELFNGKKY  231 (596)
T ss_pred             cceeeccc-ccccccCCCCCccChHhhcCccc
Confidence            99988744 55668999999999999988754

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=8.2e-27  Score=217.88  Aligned_cols=171  Identities=18%  Similarity=0.318  Sum_probs=131.9

Q ss_pred             ccceeccceEEEEEecccCceeEEEecceeEE------E---------------e------cCCCChhhHHHHHHHHhhh
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQV------L---------------V------SPQFPETALDEIKLLKCVR  122 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~------~---------------~------~~~~~~~~~~E~~~l~~l~  122 (284)
                      .+..+.++|++++.||+|+||+||+|..+...      +               +      .......+.+|+.+++.++
T Consensus       142 ~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~  221 (501)
T PHA03210        142 HDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN  221 (501)
T ss_pred             cchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC
Confidence            34445578999999999999999998643200      0               0      0011234678999999998


Q ss_pred             cCCCCCcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhhCCCc
Q psy16752        123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKY---RGIPLENVRSIIRQILQGLNYLHTKCRI  199 (284)
Q Consensus       123 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~gi  199 (284)
                      |        +||+++++++.    .....|+||++++++++.++.....   .......++.++.||+.||.|||++ ||
T Consensus       222 H--------pnIv~l~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~-gI  288 (501)
T PHA03210        222 H--------ENILKIEEILR----SEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK-KL  288 (501)
T ss_pred             C--------CCcCcEeEEEE----ECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC-Ce
Confidence            8        66999998877    6778999999999999988765321   1244677889999999999999999 99


Q ss_pred             EecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        200 IHTDIKPENVLLCVDEARVKTLALNATELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       200 vHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||||||+|||++.+ +.++|+|||++........ ....++||..|+|||++.+.
T Consensus       289 iHrDLKP~NILl~~~-~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  343 (501)
T PHA03210        289 IHRDIKLENIFLNCD-GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGD  343 (501)
T ss_pred             ecCCCCHHHEEECCC-CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCC
Confidence            999999999999554 8999999999876544322 23356899999999998653

>KOG0201|consensus

Probab=99.94  E-value=5.9e-28  Score=210.57  Aligned_cols=161  Identities=22%  Similarity=0.350  Sum_probs=137.9

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .|..++.||+|.||.||+|.+..     ++++.     ....+++.+|+.+|..+++        ++|..+|+.|.    
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~--------~~it~yygsyl----   81 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS--------PNITEYYGSYL----   81 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc--------chHHhhhhhee----
Confidence            48888999999999999998833     44442     2234567889999999998        66889999887    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .+..+|++|||+ +|+..+.+....  .+.+..+..++++++.||.|||.+ +.+|||||+.|||+..+ +.++++|||.
T Consensus        82 ~g~~LwiiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~-g~vkl~DfgV  157 (467)
T KOG0201|consen   82 KGTKLWIIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSES-GDVKLADFGV  157 (467)
T ss_pred             ecccHHHHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEecc-CcEEEEecce
Confidence            788999999999 677777776544  358999999999999999999999 99999999999999666 9999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +...........+++|||.||||||+.+
T Consensus       158 a~ql~~~~~rr~tfvGTPfwMAPEVI~~  185 (467)
T KOG0201|consen  158 AGQLTNTVKRRKTFVGTPFWMAPEVIKQ  185 (467)
T ss_pred             eeeeechhhccccccccccccchhhhcc
Confidence            9888777777789999999999999974

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.94  E-value=2.4e-26  Score=199.80  Aligned_cols=161  Identities=22%  Similarity=0.278  Sum_probs=127.5

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      |++.+.||+|+||.||+|.+.     ++++....       ....+.+|+.++..+.|        ++++.+++.+.   
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~--------~~iv~~~~~~~---   70 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNS--------RFVVSLAYAYE---   70 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCC--------CcEEEEEEEEc---
Confidence            889999999999999999763     24443211       12346789999999988        66888887766   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +|+|...+.......+++..+..++.|++.||.|||+. ||+||||||+|||++. .+.++|+|||
T Consensus        71 -~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~-~~~~kl~Dfg  147 (285)
T cd05631          71 -TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDD-RGHIRISDLG  147 (285)
T ss_pred             -cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECC-CCCEEEeeCC
Confidence             677899999999 56776666554434589999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++...... .......||+.|+|||++.+
T Consensus       148 ~~~~~~~~-~~~~~~~g~~~y~aPE~~~~  175 (285)
T cd05631         148 LAVQIPEG-ETVRGRVGTVGYMAPEVINN  175 (285)
T ss_pred             CcEEcCCC-CeecCCCCCCCccCHhhhcC
Confidence            98764332 22234579999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.94  E-value=1.9e-26  Score=204.08  Aligned_cols=163  Identities=21%  Similarity=0.255  Sum_probs=126.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|.+.+.||+|+||.||+|.++     .++++....       ......|..++..+.+       +++++.+++.+.  
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-------~~~i~~~~~~~~--   71 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGK-------PPFLTQLHSCFQ--   71 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC-------CCeEeeEEEEEe--
Confidence            4899999999999999999763     344443211       1234556666666544       366777777666  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +|+|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+||
T Consensus        72 --~~~~~~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~-~~~kL~Df  145 (323)
T cd05616          72 --TMDRLYFVMEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSE-GHIKIADF  145 (323)
T ss_pred             --cCCEEEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCC-CcEEEccC
Confidence              678899999999 678877776543  589999999999999999999999 99999999999999554 89999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.............+||+.|+|||++.+.
T Consensus       146 G~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  176 (323)
T cd05616         146 GMCKENMWDGVTTKTFCGTPDYIAPEIIAYQ  176 (323)
T ss_pred             CCceecCCCCCccccCCCChhhcCHHHhcCC
Confidence            9987544333344467899999999998653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.4e-26  Score=204.10  Aligned_cols=162  Identities=18%  Similarity=0.263  Sum_probs=129.1

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||+||++.++     +++|+...       ....+..|+.++..+.|        ++|+.+++.+.  
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~--   71 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR--------RWITNLHYAFQ--   71 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC--------CCCCceEEEEe--
Confidence            6999999999999999999863     34454321       12335678888888877        66888888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +++|.+.+.+.. ..+++..++.++.||+.||.|||++ +|+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~-~~~~kl~Df  146 (331)
T cd05597          72 --DENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDK-NGHIRLADF  146 (331)
T ss_pred             --cCCeEEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECC-CCCEEEEEC
Confidence              778999999999 778887776533 3589999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCCC-CcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKLP-VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~~-~~~~gt~~~~aPE~l~~  253 (284)
                      |++.......... ...+||+.|+|||++..
T Consensus       147 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05597         147 GSCLRLLADGTVQSNVAVGTPDYISPEILQA  177 (331)
T ss_pred             CceeecCCCCCccccceeccccccCHHHHhh
Confidence            9986554332222 23569999999999863

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=2.2e-26  Score=203.69  Aligned_cols=163  Identities=23%  Similarity=0.335  Sum_probs=125.3

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      |++++.||+|+||.||+|.++     +++|+...       ..+.+..|++++..+..     ..|+||+++++.+.   
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~-----l~hp~i~~~~~~~~---   72 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS-----ERHPFLVNLFACFQ---   72 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc-----cCCCChhceeeEEE---
Confidence            788999999999999999763     34444321       12345556665544331     11377999998876   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +++|...+..   ..+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++|+|||
T Consensus        73 -~~~~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~-~~~kL~Dfg  146 (324)
T cd05589          73 -TEDHVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTE-GFVKIADFG  146 (324)
T ss_pred             -cCCEEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCC-CcEEeCccc
Confidence             778999999999 5666655533   2499999999999999999999999 99999999999999655 899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++...........+.+||+.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  176 (324)
T cd05589         147 LCKEGMGFGDRTSTFCGTPEFLAPEVLTET  176 (324)
T ss_pred             CCccCCCCCCcccccccCccccCHhHhcCC
Confidence            987544443444567899999999988654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.94  E-value=3e-26  Score=202.84  Aligned_cols=162  Identities=20%  Similarity=0.255  Sum_probs=127.6

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      |.+...||+|+||+||+|.++     +++|+...       ....+..|..++..+.|+       ++++.++..+.   
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-------~~i~~~~~~~~---   71 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP-------PFLTQLHSCFQ---   71 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC-------CchhheeeEEe---
Confidence            788999999999999999763     35554322       123356677888777652       55777777666   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|||
T Consensus        72 -~~~~~~lv~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~-~~ikL~Dfg  146 (323)
T cd05615          72 -TVDRLYFVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSE-GHIKIADFG  146 (323)
T ss_pred             -cCCEEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCC-CCEEEeccc
Confidence             677899999999 677777765543  589999999999999999999999 99999999999999654 899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++.............+||+.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  176 (323)
T cd05615         147 MCKEHMVDGVTTRTFCGTPDYIAPEIIAYQ  176 (323)
T ss_pred             cccccCCCCccccCccCCccccCHHHHcCC
Confidence            987554433344466799999999998654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=6.7e-26  Score=208.92  Aligned_cols=165  Identities=24%  Similarity=0.331  Sum_probs=134.9

Q ss_pred             ccceEEEEEecccCceeEEEeccee---EEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT---QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ...|.+.+.||+|+||.||+|.+..   .+.++........+|+.++++++|        +||+++++.+.    .....
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~H--------pnIv~l~~~~~----~~~~~  235 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSH--------PAVLALLDVRV----VGGLT  235 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCC--------CCCCcEEEEEE----ECCEE
Confidence            4579999999999999999998732   233333445567899999999998        66999988765    66789


Q ss_pred             EEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhh
Q psy16752        152 CMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAAT  231 (284)
Q Consensus       152 ~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~  231 (284)
                      |+||+++.++|...+.... ..+++..++.++.||+.||.|||++ |||||||||+||||+.+ +.++|+|||++.....
T Consensus       236 ~lv~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~NILl~~~-~~vkL~DFGla~~~~~  312 (461)
T PHA03211        236 CLVLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTENVLVNGP-EDICLGDFGAACFARG  312 (461)
T ss_pred             EEEEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHHHEEECCC-CCEEEcccCCceeccc
Confidence            9999999999998887643 3599999999999999999999999 99999999999999544 7899999999876543


Q ss_pred             CCC--CCCcccCCCCccchhhhhhc
Q psy16752        232 GHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       232 ~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...  .....+||+.|+|||++.+.
T Consensus       313 ~~~~~~~~~~~GT~~Y~APE~~~~~  337 (461)
T PHA03211        313 SWSTPFHYGIAGTVDTNAPEVLAGD  337 (461)
T ss_pred             ccccccccccCCCcCCcCHHHHcCC
Confidence            322  22356799999999998654

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.94  E-value=5.9e-26  Score=197.13  Aligned_cols=163  Identities=26%  Similarity=0.439  Sum_probs=132.2

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||+||+|.++     .+++...      ...+.+.+|+.+++.++|        ++|+++++.+.   
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~---   70 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQ--------ENIVELKEAFR---   70 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCC--------ccccchhhhEe---
Confidence            6999999999999999999874     2344321      223557789999999988        66888888776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....+|+||||+.++++..+.... ..+++..+..++.||+.||.|||.. +|+||||||+||+++. ++.++|+|||+
T Consensus        71 -~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~-~~~~kl~Dfg~  146 (287)
T cd07848          71 -RRGKLYLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISH-NDVLKLCDFGF  146 (287)
T ss_pred             -cCCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcC-CCcEEEeeccC
Confidence             678899999999888887776543 3589999999999999999999999 9999999999999954 48999999999


Q ss_pred             hhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +........ ......||+.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (287)
T cd07848         147 ARNLSEGSNANYTEYVATRWYRSPELLLGA  176 (287)
T ss_pred             cccccccccccccccccccccCCcHHHcCC
Confidence            886543322 22345789999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.9e-26  Score=201.96  Aligned_cols=155  Identities=21%  Similarity=0.290  Sum_probs=125.3

Q ss_pred             ecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ||+|+||.||+|.+.     .++++...       ....+.+|+.++..+.|        ++|+++++.+.    ....+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~----~~~~~   68 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC--------PFIVPLKFSFQ----SPEKL   68 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--------CcEeceeeEEe----cCCeE
Confidence            799999999999873     24443321       12345679999999987        66999888776    77899


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++|+|||++....
T Consensus        69 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~-~~~~kl~Dfg~~~~~~  144 (312)
T cd05585          69 YLVLAFINGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDY-QGHIALCDFGLCKLNM  144 (312)
T ss_pred             EEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECC-CCcEEEEECcccccCc
Confidence            9999999 677877776543  589999999999999999999999 9999999999999954 4899999999987654


Q ss_pred             hCCCCCCcccCCCCccchhhhhhc
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .........+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~gt~~y~aPE~~~~~  168 (312)
T cd05585         145 KDDDKTNTFCGTPEYLAPELLLGH  168 (312)
T ss_pred             cCCCccccccCCcccCCHHHHcCC
Confidence            443444567899999999998654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=2.8e-26  Score=203.51  Aligned_cols=156  Identities=23%  Similarity=0.344  Sum_probs=124.3

Q ss_pred             EecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         83 KLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .||+|+||.||+|.++     .++|+...       ....+.+|+.+++.+.|        ++|+.++..+.    ....
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~----~~~~   69 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH--------PFLTSLKYSFQ----TKDR   69 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--------CCCcceEEEEE----cCCE
Confidence            6899999999999763     24444321       12456778899998888        66888887776    7789


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      +|+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++|+|||++...
T Consensus        70 ~~lv~Ey~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~-~~~~kL~DfG~~~~~  145 (328)
T cd05593          70 LCFVMEYVNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDK-DGHIKITDFGLCKEG  145 (328)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECC-CCcEEEecCcCCccC
Confidence            99999999 667776665543  589999999999999999999999 9999999999999954 489999999998754


Q ss_pred             hhCCCCCCcccCCCCccchhhhhhc
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..........+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~gt~~y~aPE~~~~~  170 (328)
T cd05593         146 ITDAATMKTFCGTPEYLAPEVLEDN  170 (328)
T ss_pred             CCcccccccccCCcCccChhhhcCC
Confidence            4333344467899999999998643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.94  E-value=5.4e-26  Score=197.69  Aligned_cols=169  Identities=22%  Similarity=0.389  Sum_probs=130.3

Q ss_pred             ceEEEEEecccCceeEEEecce------eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK------TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~------~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||+||+|.+.      .+++....      ......+|+.+++.+...     .|+||+++++.+...
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----~hpniv~~~~~~~~~   76 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF-----EHPNVVRLFDVCTVS   76 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhccc-----CCCCcceEEEEEecc
Confidence            6999999999999999999752      23333211      223466788888776421     137799888866422


Q ss_pred             c-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 G-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      . .....+++||||+++++.+++.......+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++|+||
T Consensus        77 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~-~~~kl~Df  154 (290)
T cd07862          77 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSS-GQIKLADF  154 (290)
T ss_pred             cCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCC-CCEEEccc
Confidence            1 245679999999999999988775555689999999999999999999999 99999999999999554 89999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |++...... .......||+.|+|||++.+
T Consensus       155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  183 (290)
T cd07862         155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQ  183 (290)
T ss_pred             cceEeccCC-cccccccccccccChHHHhC
Confidence            998755433 23345679999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.94  E-value=3.8e-26  Score=202.30  Aligned_cols=157  Identities=22%  Similarity=0.328  Sum_probs=123.1

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||.||+|.++     .++++...       ....+..|+.++..+.|        ++|+.++..+.    ...
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h--------p~i~~~~~~~~----~~~   68 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH--------PFLTALKYSFQ----THD   68 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--------CCCCceEEEEE----cCC
Confidence            36899999999999763     24444321       12345678888888877        66888888776    778


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .+|+||||+ +++|...+....  .+++..+..++.||+.||.|||+ . ||+||||||+|||++. ++.++|+|||++.
T Consensus        69 ~~~lv~E~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~-~~~~kL~Dfg~~~  144 (325)
T cd05594          69 RLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDK-DGHIKITDFGLCK  144 (325)
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECC-CCCEEEecCCCCe
Confidence            899999999 667766665443  58999999999999999999997 7 9999999999999954 4899999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (325)
T cd05594         145 EGIKDGATMKTFCGTPEYLAPEVLEDN  171 (325)
T ss_pred             ecCCCCcccccccCCcccCCHHHHccC
Confidence            544333344466899999999998653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=2.8e-26  Score=203.06  Aligned_cols=156  Identities=22%  Similarity=0.328  Sum_probs=124.2

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||.||++.++     +++|+...       ....+..|+.+++.++|        ++|+++++.+.    ...
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~i~~~~~~~~----~~~   68 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH--------PFLTALKYAFQ----THD   68 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC--------CCCcceeeEEe----cCC
Confidence            36899999999999763     24444321       12345678999999988        66888888776    678


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||++..
T Consensus        69 ~~~lv~E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~~  144 (323)
T cd05595          69 RLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDK-DGHIKITDFGLCKE  144 (323)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcC-CCCEEecccHHhcc
Confidence            899999999 667766665543  589999999999999999999999 9999999999999954 48999999999875


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhh
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ...........+||+.|+|||++.+
T Consensus       145 ~~~~~~~~~~~~gt~~y~aPE~~~~  169 (323)
T cd05595         145 GISDGATMKTFCGTPEYLAPEVLED  169 (323)
T ss_pred             ccCCCCccccccCCcCcCCcccccC
Confidence            4433334446789999999999854

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG4717|consensus

Probab=99.94  E-value=1.2e-26  Score=205.95  Aligned_cols=173  Identities=22%  Similarity=0.361  Sum_probs=150.7

Q ss_pred             eccceEEEEEecccCceeEEEecc-----eeEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +.+-|.+.+.||+|.|++|-+|++     +++++++.+.      ...+.+|++.|+.+.|        +||+++|+.+.
T Consensus        16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQH--------pNiVRLYEViD   87 (864)
T KOG4717|consen   16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQH--------PNIVRLYEVID   87 (864)
T ss_pred             eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcC--------cCeeeeeehhc
Confidence            345699999999999999999987     5577765443      3557889999999999        67999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ++..+|+|+|+- +|+|++++.++.. ++++..++.||.||+.|+.|+|+. .||||||||+|+++...-+-|||.
T Consensus        88 ----TQTKlyLiLELGD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEKlGlVKLT  161 (864)
T KOG4717|consen   88 ----TQTKLYLILELGDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEKLGLVKLT  161 (864)
T ss_pred             ----ccceEEEEEEecCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeeecCceEee
Confidence                899999999998 7799999998764 599999999999999999999999 999999999999998888999999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhccchhhHH
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRRMSKNKKK  261 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~~~~~  261 (284)
                      |||++..+.++. ...+.||...|.|||+|.+.-.+-+..
T Consensus       162 DFGFSNkf~PG~-kL~TsCGSLAYSAPEILLGDsYDAPAV  200 (864)
T KOG4717|consen  162 DFGFSNKFQPGK-KLTTSCGSLAYSAPEILLGDSYDAPAV  200 (864)
T ss_pred             eccccccCCCcc-hhhcccchhhccCchhhhcCccCCcch
Confidence            999998888774 445889999999999999887665544

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=2.9e-26  Score=202.96  Aligned_cols=157  Identities=23%  Similarity=0.322  Sum_probs=125.4

Q ss_pred             EEecccCceeEEEecce--------eEEEecCC--------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         82 RKLGWGHFSTVWFTGSK--------TQVLVSPQ--------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~--------~~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +.||+|+||.||+|...        .++|+...        ....+..|+.+++.+.|        +||+++++.+.   
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~h--------p~iv~~~~~~~---   70 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH--------PFIVDLIYAFQ---   70 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCC--------CchhceeeEEe---
Confidence            58999999999998641        34444321        12345679999999988        66999988776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +++|.+.+.+..  .+.+..++.++.||+.||.|||+. ||+||||||+|||++. ++.++|+|||
T Consensus        71 -~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~-~~~~kl~Dfg  145 (323)
T cd05584          71 -TGGKLYLILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDA-QGHVKLTDFG  145 (323)
T ss_pred             -cCCeEEEEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECC-CCCEEEeeCc
Confidence             677899999999 667777776543  488999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++.............+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (323)
T cd05584         146 LCKESIHEGTVTHTFCGTIEYMAPEILMRS  175 (323)
T ss_pred             CCeecccCCCcccccCCCccccChhhccCC
Confidence            987554444444566899999999998653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0660|consensus

Probab=99.94  E-value=6.2e-27  Score=200.04  Aligned_cols=170  Identities=24%  Similarity=0.378  Sum_probs=134.1

Q ss_pred             ccceEEEEEecccCceeEEEeccee-----EEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ..+|..++.||+|+||.|+.|.++.     ++|..      ....++.++|+.+|+.++|        +||+.+++.+..
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~H--------eNIi~l~di~~p   92 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRH--------ENIIGLLDIFRP   92 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcC--------CCcceEEeeccc
Confidence            3467778999999999999998732     22221      1224667899999999999        668877777653


Q ss_pred             -eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 -CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 -~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                       ....-..+|+|+|+|+.+|.+.+..+.  .++...+..++.||+.||.|+|+. +|+||||||.|+|++.+ ..+||+|
T Consensus        93 ~~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~-c~lKI~D  168 (359)
T KOG0660|consen   93 PSRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNAD-CDLKICD  168 (359)
T ss_pred             ccccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccC-CCEEecc
Confidence             222456799999999888888876654  499999999999999999999999 99999999999999666 7899999


Q ss_pred             ccchhHhhhC--CCCCCcccCCCCccchhhhhhccc
Q psy16752        223 LNATELAATG--HKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       223 fg~a~~~~~~--~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      ||+|+.....  .......+-|-+|.|||++..-..
T Consensus       169 FGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~  204 (359)
T KOG0660|consen  169 FGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSE  204 (359)
T ss_pred             ccceeeccccCcccchhcceeeeeecCHHHHhcccc
Confidence            9999987643  122335578999999999855443

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=5.2e-26  Score=202.33  Aligned_cols=167  Identities=19%  Similarity=0.237  Sum_probs=126.2

Q ss_pred             ccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhcccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQLL  138 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~  138 (284)
                      .++|++.+.||+|+||.||+|.+          .+++|.....     ...+.+|+.++..+ .|        +||++++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~niv~~~   77 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH--------LNVVNLL   77 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccC--------cceeeEE
Confidence            35799999999999999999963          1244443221     24577899999998 56        7799998


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhC-----------------------------------------------
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK-----------------------------------------------  170 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----------------------------------------------  170 (284)
                      +.+.   .....+++||||+ +|+|.+++....                                               
T Consensus        78 ~~~~---~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (338)
T cd05102          78 GACT---KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTS  154 (338)
T ss_pred             eEec---CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccC
Confidence            8654   2345689999999 778877776421                                               


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--C
Q psy16752        171 -------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHK--L  235 (284)
Q Consensus       171 -------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~  235 (284)
                                   ...+++..+..++.||+.||.|||+. ||+||||||+|||++. .+.++|+|||++........  .
T Consensus       155 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~-~~~~kl~DfG~a~~~~~~~~~~~  232 (338)
T cd05102         155 GSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVR  232 (338)
T ss_pred             cccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcC-CCcEEEeecccccccccCcchhc
Confidence                         12377888999999999999999999 9999999999999954 48999999999875433221  1


Q ss_pred             CCcccCCCCccchhhhhhc
Q psy16752        236 PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       236 ~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..+..+++.|+|||++.+.
T Consensus       233 ~~~~~~~~~y~aPE~~~~~  251 (338)
T cd05102         233 KGSARLPLKWMAPESIFDK  251 (338)
T ss_pred             ccCCCCCccccCcHHhhcC
Confidence            2234567789999987543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=6.7e-26  Score=201.28  Aligned_cols=165  Identities=21%  Similarity=0.330  Sum_probs=129.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||+|.++     +++|....      ....+.+|+.+++.++|        +||+++++.+....
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~~~~   72 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRH--------PDIVEIKHIMLPPS   72 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCC--------CCEeeecceEeccC
Confidence            5999999999999999999763     34443221      12346789999999998        66888887654221


Q ss_pred             -cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 -VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 -~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....+|+||||++++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||
T Consensus        73 ~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~-~~~~kL~Dfg  148 (338)
T cd07859          73 RREFKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANA-DCKLKICDFG  148 (338)
T ss_pred             CCCCceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECC-CCcEEEccCc
Confidence             1234689999999999988886543  489999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCC---CCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHK---LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++........   ......||+.|+|||++.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  180 (338)
T cd07859         149 LARVAFNDTPTAIFWTDYVATRWYRAPELCGS  180 (338)
T ss_pred             cccccccccCccccccCCCCCCCcCCHHHHhc
Confidence            9875432211   1234579999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0599|consensus

Probab=99.94  E-value=1.1e-27  Score=197.93  Aligned_cols=166  Identities=26%  Similarity=0.425  Sum_probs=138.9

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEec------------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVS------------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~------------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .|.-.+.||+|..++|-++.++.     ++++.            ....+....|+.+|+++..       ||+|+++.+
T Consensus        18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~G-------HP~II~l~D   90 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMG-------HPYIIDLQD   90 (411)
T ss_pred             hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcC-------CCcEEEeee
Confidence            46677889999999888776632     22221            1113445679999999876       688999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v  218 (284)
                      .|+    ...++++|+|++ .|.|++++...-  .++++..+.+|+|+++|++|||.+ .||||||||+|||+ .|+..+
T Consensus        91 ~ye----s~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILl-ddn~~i  162 (411)
T KOG0599|consen   91 VYE----SDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILL-DDNMNI  162 (411)
T ss_pred             ecc----CcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheee-ccccce
Confidence            998    889999999999 899999997765  599999999999999999999999 99999999999999 455899


Q ss_pred             EEEeccchhHhhhCCCCCCcccCCCCccchhhhhhccchh
Q psy16752        219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMSKN  258 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~~  258 (284)
                      +|.|||+|....++. .....||||.|.|||.+...+.++
T Consensus       163 ~isDFGFa~~l~~Ge-kLrelCGTPgYLAPEtikC~m~e~  201 (411)
T KOG0599|consen  163 KISDFGFACQLEPGE-KLRELCGTPGYLAPETIKCSMYEN  201 (411)
T ss_pred             EEeccceeeccCCch-hHHHhcCCCcccChhheeeecccC
Confidence            999999999888774 444789999999999999998875

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.94  E-value=5.1e-26  Score=203.84  Aligned_cols=166  Identities=23%  Similarity=0.344  Sum_probs=130.3

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +.++|++.+.||+|+||.||+|.+.     .+++....      ....+.+|+.+++.++|        +||+++++.+.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~   86 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH--------KNIISLLNVFT   86 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCC--------Cchhceeeeee
Confidence            3468999999999999999999763     24443321      12456789999999988        66888888764


Q ss_pred             Eec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        143 ICG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       143 ~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      ...  ......|+||||+.+++.+.+..    .+++..+..++.|++.||.|||++ ||+||||||+|||++. ++.++|
T Consensus        87 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~-givHrDikp~Nill~~-~~~~kl  160 (355)
T cd07874          87 PQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKI  160 (355)
T ss_pred             ccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEECC-CCCEEE
Confidence            211  13346899999998888877743    388999999999999999999999 9999999999999955 489999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++...... .......||+.|+|||++.+.
T Consensus       161 ~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~  193 (355)
T cd07874         161 LDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  193 (355)
T ss_pred             eeCcccccCCCc-cccCCccccCCccCHHHHcCC
Confidence            999998765433 223356789999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.94  E-value=6.1e-26  Score=203.67  Aligned_cols=166  Identities=24%  Similarity=0.347  Sum_probs=130.0

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +.++|++.+.||+|+||.||+|.++     .+++....      ....+.+|+.+++.++|        +||+++++.+.
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~   90 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH--------KNIISLLNVFT   90 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCC--------CCEeeeeeeec
Confidence            4468999999999999999999763     24444321      23456789999999988        66888888765


Q ss_pred             Eecc--CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        143 ICGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       143 ~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      ....  ....+|+||||+++++.+.+..    .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|
T Consensus        91 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~-~ivHrDlkp~NIl~~~-~~~~kl  164 (359)
T cd07876          91 PQKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKI  164 (359)
T ss_pred             cCCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECC-CCCEEE
Confidence            2211  2246899999999888877643    378999999999999999999999 9999999999999955 489999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++...... .......||+.|+|||++.+.
T Consensus       165 ~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~  197 (359)
T cd07876         165 LDFGLARTACTN-FMMTPYVVTRYYRAPEVILGM  197 (359)
T ss_pred             ecCCCccccccC-ccCCCCcccCCCCCchhccCC
Confidence            999998754332 223345789999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.93  E-value=4.4e-26  Score=201.54  Aligned_cols=158  Identities=27%  Similarity=0.324  Sum_probs=123.6

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||+||+|.++     +++|+...       ....+..|..++..+.+       |++|+++++.+.    ...
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-------h~~iv~~~~~~~----~~~   69 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-------HPFLTQLYCCFQ----TPD   69 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccC-------CCchhceeeEEE----cCC
Confidence            36899999999999863     24444321       12345567777766532       377999998776    778


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|||++..
T Consensus        70 ~~~iv~Ey~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~-~~~kL~DfG~~~~  145 (320)
T cd05590          70 RLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHE-GHCKLADFGMCKE  145 (320)
T ss_pred             EEEEEEcCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCC-CcEEEeeCCCCee
Confidence            899999999 567776665543  589999999999999999999999 99999999999999554 8999999999875


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...........+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (320)
T cd05590         146 GIFNGKTTSTFCGTPDYIAPEILQEM  171 (320)
T ss_pred             cCcCCCcccccccCccccCHHHHcCC
Confidence            54443445567899999999998653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=4.6e-26  Score=201.10  Aligned_cols=158  Identities=26%  Similarity=0.347  Sum_probs=121.6

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||+||+|.++     +++|+...       ..+....|..++..+.+       |++|+++++.+.    ...
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-------hp~i~~~~~~~~----~~~   69 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWE-------HPFLTHLFCTFQ----TKE   69 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccC-------CCCccceeeEEE----cCC
Confidence            36999999999999763     34444321       12234456666554322       377999988776    677


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|...+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++|+|||++..
T Consensus        70 ~~~lv~e~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~-~~~kL~Dfg~a~~  145 (316)
T cd05592          70 HLFFVMEYLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKD-GHIKIADFGMCKE  145 (316)
T ss_pred             EEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCC-CCEEEccCcCCeE
Confidence            899999999 667777665543  589999999999999999999999 99999999999999554 8999999999876


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...........+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (316)
T cd05592         146 NMNGEGKASTFCGTPDYIAPEILKGQ  171 (316)
T ss_pred             CCCCCCccccccCCccccCHHHHcCC
Confidence            54443444567899999999998654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.93  E-value=9.6e-26  Score=198.18  Aligned_cols=163  Identities=26%  Similarity=0.365  Sum_probs=132.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|.+.+.||+|+||.||+|.++     .+++...     .....+.+|+.+++.++|        ++++++++.+.   
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~---   74 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH--------ANIVTLHDIVH---   74 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC--------CCcceEEEEEe---
Confidence            46999999999999999999763     2444322     122356789999999988        66899888776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....|+||||+.+++.+.+.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++. .+.++|+|||+
T Consensus        75 -~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~-~~~~kl~Dfg~  150 (309)
T cd07872          75 -TDKSLTLVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINE-RGELKLADFGL  150 (309)
T ss_pred             -eCCeEEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECC-CCCEEECcccc
Confidence             677899999999889988876654 3489999999999999999999999 9999999999999954 48999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............+|+.|+|||++.+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  178 (309)
T cd07872         151 ARAKSVPTKTYSNEVVTLWYRPPDVLLG  178 (309)
T ss_pred             ceecCCCccccccccccccccCCHHHhC
Confidence            8765444333445578999999998864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG1187|consensus

Probab=99.93  E-value=3.9e-26  Score=203.86  Aligned_cols=168  Identities=25%  Similarity=0.319  Sum_probs=133.3

Q ss_pred             cceEEEEEecccCceeEEEeccee----EEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT----QVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~----~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      ++|.-...||+|+||.||+|....    ++|.....    ...+..|+.++.+++|        +|++.|++++.    .
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H--------~Nlv~LlGyC~----e  142 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRH--------PNLVKLLGYCL----E  142 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCC--------cCcccEEEEEe----c
Confidence            568888999999999999997532    44432221    3469999999999998        77999999765    5


Q ss_pred             Ce-EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        148 GT-HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC--RIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       148 ~~-~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      .. ..++|+||+ .|+|.+.+.......++|.....|+.+++.||.|||..+  .||||||||.||||+ .+...|++||
T Consensus       143 ~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD-~~~~aKlsDF  221 (361)
T KOG1187|consen  143 GGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD-EDFNAKLSDF  221 (361)
T ss_pred             CCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC-CCCCEEccCc
Confidence            55 599999999 678888876654326899999999999999999999986  499999999999996 4489999999


Q ss_pred             cchhHhhhCCCCCCcc-cCCCCccchhhhh-hccc
Q psy16752        224 NATELAATGHKLPVSF-CSTAPVQEYSELS-RRMS  256 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~-~gt~~~~aPE~l~-~~~~  256 (284)
                      |+|...........+. .||..|+|||.+. +.++
T Consensus       222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt  256 (361)
T KOG1187|consen  222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLT  256 (361)
T ss_pred             cCcccCCccccceeeecCCCCccCChhhhccCCcC
Confidence            9995444312222333 8999999999885 3444

>KOG0614|consensus

Probab=99.93  E-value=3.2e-27  Score=209.14  Aligned_cols=161  Identities=24%  Similarity=0.381  Sum_probs=138.9

Q ss_pred             ceEEEEEecccCceeEEEecceeE-----E-------EecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKTQ-----V-------LVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~~-----~-------~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +++++..||-||||.|-++..+..     +       .+.....+.+..|-++|..++.        +.|+++|-.|.  
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s--------~fIvrLYrTfr--  490 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRS--------DFIVRLYRTFR--  490 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCc--------hHHHHHHHHhc--
Confidence            578889999999999988765321     1       1233345667789999988887        77999999998  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        +..++|++||-| ||.+|..+....  .|+...++.++..+++|++|||++ |||+|||||+|+|++. .+.+||.||
T Consensus       491 --d~kyvYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~-~Gy~KLVDF  564 (732)
T KOG0614|consen  491 --DSKYVYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDN-RGYLKLVDF  564 (732)
T ss_pred             --cchhhhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeecc-CCceEEeeh
Confidence              899999999988 999999987765  599999999999999999999999 9999999999999954 599999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|+....+ ..++++||||.|+|||++-.+
T Consensus       565 GFAKki~~g-~KTwTFcGTpEYVAPEIILnK  594 (732)
T KOG0614|consen  565 GFAKKIGSG-RKTWTFCGTPEYVAPEIILNK  594 (732)
T ss_pred             hhHHHhccC-CceeeecCCcccccchhhhcc
Confidence            999998877 677899999999999998765

>KOG0608|consensus

Probab=99.93  E-value=2.3e-26  Score=208.28  Aligned_cols=136  Identities=20%  Similarity=0.344  Sum_probs=112.8

Q ss_pred             cceEEEEEecccCceeEEEecce--e---EEE-------ecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--T---QVL-------VSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--~---~~~-------~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ..|..++.||-|+||+|.+++--  .   ++|       ........+..|..||.....        ++||+||..|. 
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn--------~WVVrLyySFQ-  699 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADN--------EWVVRLYYSFQ-  699 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCC--------cceEEEEEEec-
Confidence            35889999999999999988531  1   111       111122334557778877766        88999999888 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +.+.+|+||+|+ ||++..++.+..  -|.+..++.|+++|.+|++++|.. |+|||||||+||||+.| ++|||.|
T Consensus       700 ---DkdnLYFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNILIDrd-GHIKLTD  772 (1034)
T KOG0608|consen  700 ---DKDNLYFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRD-GHIKLTD  772 (1034)
T ss_pred             ---cCCceEEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceEEccC-Cceeeee
Confidence               999999999999 889999998875  499999999999999999999999 99999999999999766 9999999


Q ss_pred             ccchh
Q psy16752        223 LNATE  227 (284)
Q Consensus       223 fg~a~  227 (284)
                      ||+|.
T Consensus       773 FGLCT  777 (1034)
T KOG0608|consen  773 FGLCT  777 (1034)
T ss_pred             ccccc
Confidence            99976

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=5.1e-26  Score=201.74  Aligned_cols=158  Identities=23%  Similarity=0.313  Sum_probs=124.4

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||.||+|.++     .++++...       ....+..|..++..+.+       |++|+.+++.+.    ...
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~-------~~~i~~~~~~~~----~~~   69 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASS-------NPFLVGLHSCFQ----TTS   69 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcC-------CCCEeeEEEEEE----eCC
Confidence            36999999999999763     24444332       12335678888877753       367888888776    778


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|...+....  .+++..++.++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|||++..
T Consensus        70 ~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~-~~~kl~Dfg~~~~  145 (327)
T cd05617          70 RLFLVIEYVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDAD-GHIKLTDYGMCKE  145 (327)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCC-CCEEEecccccee
Confidence            899999999 667777665543  599999999999999999999999 99999999999999554 7899999999875


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .........+.+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (327)
T cd05617         146 GLGPGDTTSTFCGTPNYIAPEILRGE  171 (327)
T ss_pred             ccCCCCceecccCCcccCCHHHHCCC
Confidence            44333444567899999999998653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0986|consensus

Probab=99.93  E-value=1.7e-26  Score=202.18  Aligned_cols=165  Identities=27%  Similarity=0.364  Sum_probs=134.1

Q ss_pred             cceEEEEEecccCceeEEEecceeEEEe------------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKTQVLV------------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~------------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +.|+.-++||+||||.|+-+.-+.+-+.            ...-....+.|-.+|.++..        +.||.+-.+|+ 
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s--------~FiVslaYAfe-  255 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS--------PFIVSLAYAFE-  255 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc--------CcEEEEeeeec-
Confidence            4588999999999999997765432211            12224456789999999988        66888888887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +.+.+|+||..| ||+|.-.+...+..+|++..++.|+++|+.||++||.. +||+||+||+|||+ ++.++|.|.|
T Consensus       256 ---Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILL-Dd~GhvRISD  330 (591)
T KOG0986|consen  256 ---TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILL-DDHGHVRISD  330 (591)
T ss_pred             ---CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheee-ccCCCeEeec
Confidence               899999999999 66665555555556799999999999999999999999 99999999999999 5559999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|+|--...+... ...+||.+|||||++.+..
T Consensus       331 LGLAvei~~g~~~-~~rvGT~GYMAPEvl~ne~  362 (591)
T KOG0986|consen  331 LGLAVEIPEGKPI-RGRVGTVGYMAPEVLQNEV  362 (591)
T ss_pred             cceEEecCCCCcc-ccccCcccccCHHHHcCCc
Confidence            9999877666433 3458999999999997654

>KOG1152|consensus

Probab=99.93  E-value=8.2e-26  Score=202.83  Aligned_cols=165  Identities=24%  Similarity=0.327  Sum_probs=137.5

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEec------------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVS------------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~------------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      +|..++.+|.|+||.|++|.++.     .+|..            ......+.-|+.+|..++...     |+||+++++
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~s-----H~NIlKlLd  636 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHS-----HENILKLLD  636 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcC-----ccchhhhhh
Confidence            59999999999999999998854     12211            111334567999999998311     388999999


Q ss_pred             cceEeccCCeEEEEEeccC--CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        140 DFKICGVNGTHVCMVFEVL--GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~--~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      .|+    +.+++||+||-.  +-+|++++....  ++++..++.|+.||+.|+.+||++ ||||||||-+|+.++.+ +.
T Consensus       637 fFE----ddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenvivd~~-g~  708 (772)
T KOG1152|consen  637 FFE----DDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIVDSN-GF  708 (772)
T ss_pred             eee----cCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhcccccccc-CceecccccccEEEecC-Ce
Confidence            999    999999999988  447888887765  599999999999999999999999 99999999999999655 89


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      ++|+|||.|.....+  ....++||..|.|||+|.|.-.
T Consensus       709 ~klidfgsaa~~ksg--pfd~f~gtv~~aapevl~g~~y  745 (772)
T KOG1152|consen  709 VKLIDFGSAAYTKSG--PFDVFVGTVDYAAPEVLGGEKY  745 (772)
T ss_pred             EEEeeccchhhhcCC--CcceeeeeccccchhhhCCCcc
Confidence            999999999877764  3457899999999999987644

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.93  E-value=8e-26  Score=200.54  Aligned_cols=162  Identities=20%  Similarity=0.268  Sum_probs=129.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|.+.+.||+|+||+||+|.++     .++++...       ....+..|+.+++.+.|        ++|+.+++.+.  
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~--------~~i~~~~~~~~--   71 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS--------PWIPQLQYAFQ--   71 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--------CCCcceeeEEe--
Confidence            5999999999999999999763     24444322       22346678888888777        66888887766  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +++|.+++.+.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++. .+.++|+||
T Consensus        72 --~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~-~~~~kL~Df  146 (330)
T cd05601          72 --DKDNLYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDR-TGHIKLADF  146 (330)
T ss_pred             --cCCeEEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECC-CCCEEeccC
Confidence              677899999999 778877776653 3599999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCC-CCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKL-PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~-~~~~~gt~~~~aPE~l~~  253 (284)
                      |++......... .....||+.|+|||++..
T Consensus       147 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (330)
T cd05601         147 GSAARLTANKMVNSKLPVGTPDYIAPEVLTT  177 (330)
T ss_pred             CCCeECCCCCceeeecccCCccccCHHHhcc
Confidence            998765443222 234579999999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.93  E-value=1e-25  Score=200.22  Aligned_cols=161  Identities=17%  Similarity=0.270  Sum_probs=127.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||+||++..+     .++++...       ....+..|+.++..+.|        ++++.+++.+.  
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~--   71 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN--------QWITTLHYAFQ--   71 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC--------CCEeeEEEEEe--
Confidence            5999999999999999999763     34444321       12235667777777766        66888888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +|+|.+.+.+.. ..+++..++.++.||+.||.|||+. +|+||||||+|||++ .++.++|+||
T Consensus        72 --~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~-~~~~~kL~Df  146 (332)
T cd05623          72 --DENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMD-MNGHIRLADF  146 (332)
T ss_pred             --cCCEEEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEC-CCCCEEEeec
Confidence              778899999999 778888876543 3589999999999999999999999 999999999999995 4489999999


Q ss_pred             cchhHhhhCCCC-CCcccCCCCccchhhhh
Q psy16752        224 NATELAATGHKL-PVSFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~~~-~~~~~gt~~~~aPE~l~  252 (284)
                      |++......... ....+||+.|+|||++.
T Consensus       147 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623         147 GSCLKLMEDGTVQSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             chheecccCCcceecccccCccccCHHHHh
Confidence            998754433222 22457999999999985

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=1.1e-25  Score=197.37  Aligned_cols=165  Identities=18%  Similarity=0.286  Sum_probs=127.3

Q ss_pred             ccceEEEEEecccCceeEEEecce---------------------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---------------------TQVLVSPQF-----PETALDEIKLLKCVRDGDVND  128 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---------------------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~  128 (284)
                      .++|++.+.||+|+||.||+|.+.                     +++++....     ...+.+|+.++..++|     
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----   78 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD-----   78 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC-----
Confidence            457999999999999999998631                     344443221     2357789999999988     


Q ss_pred             cccchhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCC-----------------CCCCHHHHHHHHHHHHHHH
Q psy16752        129 PYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-----------------RGIPLENVRSIIRQILQGL  190 (284)
Q Consensus       129 ~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----------------~~~~~~~~~~i~~qi~~aL  190 (284)
                         +||+++++.+.    .....|+||||+ +++|.+.+.....                 ..+++..+..++.||+.||
T Consensus        79 ---~niv~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al  151 (304)
T cd05096          79 ---PNIIRLLGVCV----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGM  151 (304)
T ss_pred             ---CCeeEEEEEEe----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence               67999998776    567799999999 6788777754321                 1367788999999999999


Q ss_pred             HHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        191 NYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       191 ~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      .|||+. ||+||||||+|||++. .+.++|+|||++........  ......++..|+|||++.+
T Consensus       152 ~~lH~~-~ivH~dlkp~Nill~~-~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  214 (304)
T cd05096         152 KYLSSL-NFVHRDLATRNCLVGE-NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM  214 (304)
T ss_pred             HHHHHC-CccccCcchhheEEcC-CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc
Confidence            999999 9999999999999965 48999999999875533321  1223456788999998643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.93  E-value=6.9e-26  Score=200.30  Aligned_cols=158  Identities=20%  Similarity=0.269  Sum_probs=123.4

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||.||+|.++     .++++...       ....+..|..++..+.+       |++|+.+++.+.    ...
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~-------hp~i~~~~~~~~----~~~   69 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAK-------HPFLTALHCCFQ----TKD   69 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccC-------CCCccceeeEEE----cCC
Confidence            36899999999999763     34454322       12335567777776532       377999988877    778


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|...+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++|+|||++..
T Consensus        70 ~~~lv~E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~-~~~kL~Dfg~~~~  145 (321)
T cd05591          70 RLFFVMEYVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAE-GHCKLADFGMCKE  145 (321)
T ss_pred             eEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCC-CCEEEeeccccee
Confidence            899999999 667776665543  589999999999999999999999 99999999999999554 8999999999875


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...........+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (321)
T cd05591         146 GILNGVTTTTFCGTPDYIAPEILQEL  171 (321)
T ss_pred             cccCCccccccccCccccCHHHHcCC
Confidence            54444445567899999999998653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=7.6e-26  Score=200.77  Aligned_cols=158  Identities=23%  Similarity=0.318  Sum_probs=124.8

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||.||+|.++     +++|+...       ....+..|..++..+.+       |++|+++++.+.    ...
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~-------hp~Iv~~~~~~~----~~~   69 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASN-------HPFLVGLHSCFQ----TES   69 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC-------CCCCCceEEEEE----cCC
Confidence            36899999999999763     34444322       12335678888887742       377999988776    778


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|...+.+..  .+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++|+|||++..
T Consensus        70 ~~~lv~e~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~~  145 (329)
T cd05588          70 RLFFVIEFVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDA-EGHIKLTDYGMCKE  145 (329)
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECC-CCCEEECcCccccc
Confidence            899999999 667777765543  599999999999999999999999 9999999999999955 48999999999875


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .........+.+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (329)
T cd05588         146 GIRPGDTTSTFCGTPNYIAPEILRGE  171 (329)
T ss_pred             cccCCCccccccCCccccCHHHHcCC
Confidence            44433445567899999999998653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=9.1e-26  Score=200.30  Aligned_cols=157  Identities=23%  Similarity=0.311  Sum_probs=123.0

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||.||+|.++     .++++...       ....+..|+.++..+ .|        ++|+++++.+.    ..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--------p~iv~~~~~~~----~~   68 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--------PFLVGLHSCFQ----TE   68 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCC--------CcCCceeeEEE----eC
Confidence            36999999999999763     24444322       112356677777666 44        77999998776    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|||++.
T Consensus        69 ~~~~lv~E~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~-~~~kL~DfG~~~  144 (329)
T cd05618          69 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSE-GHIKLTDYGMCK  144 (329)
T ss_pred             CEEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCC-CCEEEeeCCccc
Confidence            8899999999 567766665443  599999999999999999999999 99999999999999554 899999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (329)
T cd05618         145 EGLRPGDTTSTFCGTPNYIAPEILRGE  171 (329)
T ss_pred             cccCCCCccccccCCccccCHHHHcCC
Confidence            544433444567899999999998654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=1e-25  Score=198.85  Aligned_cols=157  Identities=25%  Similarity=0.335  Sum_probs=122.7

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||.||+|.++     .++|+...       .......|..++..+ .|        ++++.+++.+.    ..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--------~~i~~~~~~~~----~~   68 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN--------PFLTHLYCTFQ----TK   68 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--------CCccCeeEEEE----eC
Confidence            36999999999999873     24444321       223455666676654 44        67888888776    77


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .++|+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|||++.
T Consensus        69 ~~~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~-~~~kl~Dfg~~~  144 (316)
T cd05620          69 EHLFFVMEFLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRD-GHIKIADFGMCK  144 (316)
T ss_pred             CEEEEEECCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCC-CCEEeCccCCCe
Confidence            8999999999 667777776543  589999999999999999999999 99999999999999554 799999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (316)
T cd05620         145 ENVFGDNRASTFCGTPDYIAPEILQGL  171 (316)
T ss_pred             ecccCCCceeccCCCcCccCHHHHcCC
Confidence            544333444567899999999998654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=1.1e-25  Score=209.40  Aligned_cols=164  Identities=20%  Similarity=0.254  Sum_probs=130.5

Q ss_pred             ceEEEEEecccCceeEEEecce------eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK------TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~------~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .|.+.+.||+|+||.||+|...      .+++.....    ...+..|+.+++.++|        +||+++++.+.    
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H--------pniv~~~~~~~----  135 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH--------FGIVKHFDDFK----  135 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC--------CCEeEEEEEEE----
Confidence            5999999999999999999652      223322111    2345679999999998        66999999877    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      ....+|+||||+ +|+|.+.+...  ....+++..+..++.||+.||.|||++ +|+||||||+|||++. .+.++|+||
T Consensus       136 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~-~~~~kL~DF  213 (478)
T PTZ00267        136 SDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMP-TGIIKLGDF  213 (478)
T ss_pred             ECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECC-CCcEEEEeC
Confidence            678899999999 77887776542  223589999999999999999999999 9999999999999965 489999999


Q ss_pred             cchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++........  ...+.+||+.|+|||++.+.
T Consensus       214 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  246 (478)
T PTZ00267        214 GFSKQYSDSVSLDVASSFCGTPYYLAPELWERK  246 (478)
T ss_pred             cCceecCCccccccccccCCCccccCHhHhCCC
Confidence            99886543322  23466899999999998654

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=9.8e-26  Score=199.02  Aligned_cols=157  Identities=25%  Similarity=0.345  Sum_probs=126.2

Q ss_pred             EEecccCceeEEEecce--------eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         82 RKLGWGHFSTVWFTGSK--------TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~--------~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      +.||+|+||.||++.+.        .++++...      ....+..|+.+++.+.|        +||+++++.+.    .
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~----~   69 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH--------PFIVKLHYAFQ----T   69 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC--------CCcccEEEEEE----c
Confidence            57999999999988641        24443321      22345678999999988        66999888776    6


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ...+|+||||+ +++|.+.+.+..  .+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|||++
T Consensus        70 ~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~  145 (318)
T cd05582          70 EGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDE-EGHIKLTDFGLS  145 (318)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECC-CCcEEEeeccCC
Confidence            78899999999 678888775543  589999999999999999999999 9999999999999954 479999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .............+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~  173 (318)
T cd05582         146 KESIDHEKKAYSFCGTVEYMAPEVVNRR  173 (318)
T ss_pred             cccCCCCCceecccCChhhcCHHHHcCC
Confidence            7655443444567899999999998653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.93  E-value=1.2e-25  Score=199.20  Aligned_cols=157  Identities=23%  Similarity=0.343  Sum_probs=119.8

Q ss_pred             EEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHH-HHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIK-LLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~-~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||+||+|.++     .++++....       ...+..|.. +++.+.|        ++|+++++.+.    ..
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h--------~~Iv~~~~~~~----~~   68 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH--------PFLVGLHFSFQ----TA   68 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCC--------CCCCceeEEEE----cC
Confidence            36999999999999763     344443221       112233333 3455666        66888888776    77


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +++|.+.+....  .+++..++.++.||+.||.|||+. ||+||||||+|||++. ++.++|+|||++.
T Consensus        69 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~-~~~~kl~DfG~a~  144 (325)
T cd05602          69 DKLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDS-QGHIVLTDFGLCK  144 (325)
T ss_pred             CeEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECC-CCCEEEccCCCCc
Confidence            8899999999 667777665543  588999999999999999999999 9999999999999955 4899999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (325)
T cd05602         145 ENIEHNGTTSTFCGTPEYLAPEVLHKQ  171 (325)
T ss_pred             ccccCCCCcccccCCccccCHHHHcCC
Confidence            544433444567899999999998654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0607|consensus

Probab=99.93  E-value=6.6e-26  Score=190.95  Aligned_cols=162  Identities=23%  Similarity=0.344  Sum_probs=131.3

Q ss_pred             ceEE-EEEecccCceeEEEecc-----eeEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRV-TRKLGWGHFSTVWFTGS-----KTQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i-~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      -|++ .+.||+|+|+.|--+..     .+++|++.+.    ..++.+|++++..+..       |+||++++++|+    
T Consensus        78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqg-------h~nilqLiefFE----  146 (463)
T KOG0607|consen   78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQG-------HKNILQLIEFFE----  146 (463)
T ss_pred             HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcC-------CccHHHHHHHhc----
Confidence            3666 36799999999987765     2355554443    4667889999988765       699999999999    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC--CcEEEEec
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE--ARVKTLAL  223 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~--~~v~l~Df  223 (284)
                      +...+|+|||-+ ||.++..+.++.  .|++..+.+++++|+.||+|||.+ ||.||||||+|||....+  ..||||||
T Consensus       147 dd~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~vsPvKiCDf  223 (463)
T KOG0607|consen  147 DDTRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNKVSPVKICDF  223 (463)
T ss_pred             ccceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCCcCceeeecc
Confidence            899999999999 899999998876  499999999999999999999999 999999999999996543  38999999


Q ss_pred             cchhHhhhCC-------CCCCcccCCCCccchhhhh
Q psy16752        224 NATELAATGH-------KLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~-------~~~~~~~gt~~~~aPE~l~  252 (284)
                      .+..-..-..       ....+.+|++.|||||+..
T Consensus       224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd  259 (463)
T KOG0607|consen  224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVD  259 (463)
T ss_pred             ccccccccCCCCCCCCCccccCcccchhhcchhHHh
Confidence            8765332221       1123679999999999874

>KOG3653|consensus

Probab=99.93  E-value=4.5e-26  Score=200.37  Aligned_cols=179  Identities=18%  Similarity=0.232  Sum_probs=143.6

Q ss_pred             ceEEEEEecccCceeEEEeccee---EEEecC-CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT---QVLVSP-QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~---~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      ..+++++||+|.||.||+|....   ++|+.+ ...+.+..|-++++...-      .|+||++++++-+........++
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m------~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGM------KHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             chhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCc------cchhHHHhhchhccCCcccccee
Confidence            36788999999999999998743   555433 335667888888775422      13889999987664333455899


Q ss_pred             EEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------CcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        153 MVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC--------RIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       153 iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      ||++|. .|+|.+++..+-   +++..+++++..++.||.|||+..        +|+|||||+.|||| .++..+.|+||
T Consensus       285 LVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv-K~DlTccIaDF  360 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV-KNDLTCCIADF  360 (534)
T ss_pred             EEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE-ccCCcEEeecc
Confidence            999999 789999888765   999999999999999999999632        69999999999999 55599999999


Q ss_pred             cchhHhhhCCCC--CCcccCCCCccchhhhhhccchhhHHHhHH
Q psy16752        224 NATELAATGHKL--PVSFCSTAPVQEYSELSRRMSKNKKKKLKK  265 (284)
Q Consensus       224 g~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~~~~~~~~~~~~  265 (284)
                      |+|....++...  ....+||..|||||+|++.++-+..-.||+
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr  404 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKR  404 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHH
Confidence            999988765432  235789999999999999999887666654

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3e-25  Score=192.89  Aligned_cols=161  Identities=24%  Similarity=0.277  Sum_probs=127.8

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      |++.+.||+|+||+||++.+.     ++++....       ....+.+|+.+++.++|        ++|+.+++.+.   
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~---   70 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS--------RFVVSLAYAYE---   70 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCC--------CCEeeeeeeec---
Confidence            899999999999999999763     24443321       12345679999999988        66888888776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +++|...+.......+++..+..++.|++.||.|||+. |++||||||+||+++. .+.++|+|||
T Consensus        71 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~-~~~~~l~Dfg  147 (285)
T cd05605          71 -TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDD-YGHIRISDLG  147 (285)
T ss_pred             -CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECC-CCCEEEeeCC
Confidence             677899999999 56777666554444689999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++...... ......+|++.|+|||++.+
T Consensus       148 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  175 (285)
T cd05605         148 LAVEIPEG-ETIRGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             CceecCCC-CccccccCCCCccCcHHhcC
Confidence            98754332 22234578999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.93  E-value=1.6e-25  Score=198.00  Aligned_cols=157  Identities=23%  Similarity=0.339  Sum_probs=120.1

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHH-HHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIK-LLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~-~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||.||+|.++     +++++...       ....+..|.. +++.++|        ++|+++++.+.    ..
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h--------~~iv~~~~~~~----~~   68 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKH--------PFLVGLHYSFQ----TA   68 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCC--------CCccceeeEEE----cC
Confidence            36999999999999873     34444321       1122344443 4566666        67899888776    77


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +++|...+...  ..+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++|+|||++.
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~  144 (321)
T cd05603          69 EKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQ-GHVVLTDFGLCK  144 (321)
T ss_pred             CEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCC-CCEEEccCCCCc
Confidence            8899999999 66776666543  3589999999999999999999999 99999999999999554 899999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (321)
T cd05603         145 EGVEPEETTSTFCGTPEYLAPEVLRKE  171 (321)
T ss_pred             cCCCCCCccccccCCcccCCHHHhcCC
Confidence            543333344466899999999998643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.93  E-value=1.7e-25  Score=198.13  Aligned_cols=157  Identities=24%  Similarity=0.368  Sum_probs=120.4

Q ss_pred             EEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHH-HHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIK-LLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~-~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||+||+|.++     .++|+....       ...+..|.. +++.++|        ++|+++++.+.    ..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h--------p~iv~~~~~~~----~~   68 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKH--------PFLVGLHYSFQ----TT   68 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCC--------CCCccEEEEEe----cC
Confidence            36899999999999763     344443221       122344443 3455666        67888888776    77


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +++|...+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++|+|||++.
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~-~~~kL~DfG~~~  144 (325)
T cd05604          69 EKLYFVLDFVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQ-GHVVLTDFGLCK  144 (325)
T ss_pred             CEEEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCC-CCEEEeecCCcc
Confidence            8899999999 667776665433  589999999999999999999999 99999999999999554 799999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (325)
T cd05604         145 EGIAQSDTTTTFCGTPEYLAPEVIRKQ  171 (325)
T ss_pred             cCCCCCCCcccccCChhhCCHHHHcCC
Confidence            544333444567899999999998654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.93  E-value=6.7e-25  Score=190.50  Aligned_cols=169  Identities=25%  Similarity=0.410  Sum_probs=130.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||+||+|.++     .+++....      ......+|+.+++.+.+.+     |+||+++++.+....
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-----h~ni~~~~~~~~~~~   75 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFD-----HPNIVRLMDVCATSR   75 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcC-----CCCeeeeeeeecccc
Confidence            4899999999999999999874     24443221      1234567888888775311     377999888765322


Q ss_pred             -cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 -VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 -~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....+++||||+.+++..++.......+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||
T Consensus        76 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~-~~~~kl~dfg  153 (288)
T cd07863          76 TDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTS-GGQVKLADFG  153 (288)
T ss_pred             CCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECC-CCCEEECccC
Confidence             235678999999988998888765544589999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++...... .......||+.|+|||++.+
T Consensus       154 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  181 (288)
T cd07863         154 LARIYSCQ-MALTPVVVTLWYRAPEVLLQ  181 (288)
T ss_pred             ccccccCc-ccCCCccccccccCchHhhC
Confidence            98765432 22234568999999998854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.93  E-value=6.3e-25  Score=195.00  Aligned_cols=163  Identities=21%  Similarity=0.330  Sum_probs=130.7

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|++.+.||+|+||.||+|.++     .+++....     ....+.+|+.+++.++|        ++++++++.+.  
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~--   73 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS--------PYIVGFYGAFY--   73 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC--------CCCCeEEEEEE--
Confidence            457999999999999999999874     23333222     23457889999999988        66999998776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+++||||+ +++|.+.+....  .+++..+..++.|++.||.|||+..+|+||||||+|||++.+ +.++|+||
T Consensus        74 --~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~-~~~kl~Df  148 (331)
T cd06649          74 --SDGEISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR-GEIKLCDF  148 (331)
T ss_pred             --ECCEEEEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCC-CcEEEccC
Confidence              677899999999 567777765543  489999999999999999999985259999999999999554 88999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++......  ......||+.|+|||++.+.
T Consensus       149 g~~~~~~~~--~~~~~~g~~~y~aPE~~~~~  177 (331)
T cd06649         149 GVSGQLIDS--MANSFVGTRSYMSPERLQGT  177 (331)
T ss_pred             ccccccccc--ccccCCCCcCcCCHhHhcCC
Confidence            998755332  23356799999999998654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.3e-25  Score=197.68  Aligned_cols=157  Identities=21%  Similarity=0.280  Sum_probs=119.2

Q ss_pred             ecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ||+|+||+||+|.++     +++|+....       ......|..++..+..     ..|++|+.++..+.    ....+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~p~i~~~~~~~~----~~~~~   71 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLL-----DESPFIVGLKFSFQ----TDSDL   71 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhcc-----CCCCcCcceEEEEe----cCCeE
Confidence            799999999999763     344443211       1122345555554421     01377888888776    77889


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++|+|||++....
T Consensus        72 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~-~~~~kl~Dfg~a~~~~  147 (330)
T cd05586          72 YLVTDYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDA-TGHIALCDFGLSKANL  147 (330)
T ss_pred             EEEEcCCCCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECC-CCCEEEecCCcCcCCC
Confidence            9999999 677777776543  589999999999999999999999 9999999999999955 4799999999987654


Q ss_pred             hCCCCCCcccCCCCccchhhhhh
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      .........+||+.|+|||++.+
T Consensus       148 ~~~~~~~~~~gt~~y~aPE~~~~  170 (330)
T cd05586         148 TDNKTTNTFCGTTEYLAPEVLLD  170 (330)
T ss_pred             CCCCCccCccCCccccCHHHHcC
Confidence            44444456789999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.93  E-value=3.8e-25  Score=198.89  Aligned_cols=165  Identities=24%  Similarity=0.347  Sum_probs=129.5

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++.+.||+|+||.||+|.+.     .+++....      ....+.+|+.+++.+.|        +||+++++.+..
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~ii~~~~~~~~   94 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH--------KNIIGLLNVFTP   94 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCC--------CCccccceeecc
Confidence            357999999999999999999763     34444322      23456789999999988        668888776542


Q ss_pred             ec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ..  .....+|+||||+++++.+.+..    .+++..+..++.|++.||.|||++ ||+||||||+|||++.+ +.++|+
T Consensus        95 ~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~-~~~kL~  168 (364)
T cd07875          95 QKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSD-CTLKIL  168 (364)
T ss_pred             cccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEECCC-CcEEEE
Confidence            11  13346899999999998887743    378899999999999999999999 99999999999999554 899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++...... .......||+.|+|||++.+.
T Consensus       169 DfG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~  200 (364)
T cd07875         169 DFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  200 (364)
T ss_pred             eCCCccccCCC-CcccCCcccCCcCCHHHHhCC
Confidence            99998765433 223355789999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=5.4e-25  Score=195.65  Aligned_cols=163  Identities=20%  Similarity=0.344  Sum_probs=130.5

Q ss_pred             ccceEEEEEecccCceeEEEeccee-----EEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|++.+.||.|+||.||+|.++.     +++....     ....+.+|+.+++.++|        +||+++++.+.  
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~--   73 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS--------PYIVGFYGAFY--   73 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC--------CcccceeEEEE--
Confidence            4679999999999999999998742     3333221     12457789999999988        66999998877  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+..+|+||||||+|||++. .+.++|+||
T Consensus        74 --~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~-~~~~kL~Df  148 (333)
T cd06650          74 --SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDF  148 (333)
T ss_pred             --ECCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC-CCCEEEeeC
Confidence              677899999999 668877776543  48999999999999999999997427999999999999955 478999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++......  ......||+.|+|||++.+.
T Consensus       149 g~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  177 (333)
T cd06650         149 GVSGQLIDS--MANSFVGTRSYMSPERLQGT  177 (333)
T ss_pred             Ccchhhhhh--ccccCCCCccccCHHHhcCC
Confidence            998755332  22345789999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=1.9e-25  Score=197.19  Aligned_cols=157  Identities=24%  Similarity=0.345  Sum_probs=122.4

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||+||+|.++     .++|+...       .......|..++..+ .|        ++|+++++.+.    ..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--------p~iv~~~~~~~----~~   68 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--------PFLTHLYCTFQ----TK   68 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--------CcCcceEEEEE----eC
Confidence            36899999999999763     34443321       123355677776654 44        77999888776    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +|+|...+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++|+|||++.
T Consensus        69 ~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~-~~~kl~Dfg~~~  144 (316)
T cd05619          69 ENLFFVMEYLNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTD-GHIKIADFGMCK  144 (316)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCC-CCEEEccCCcce
Confidence            7899999999 678877776543  489999999999999999999999 99999999999999554 799999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (316)
T cd05619         145 ENMLGDAKTCTFCGTPDYIAPEILLGQ  171 (316)
T ss_pred             ECCCCCCceeeecCCccccCHHHHcCC
Confidence            544333344567899999999998654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0193|consensus

Probab=99.93  E-value=1.6e-25  Score=202.14  Aligned_cols=163  Identities=20%  Similarity=0.289  Sum_probs=129.0

Q ss_pred             eccceEEEEEecccCceeEEEeccee--EEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSKT--QVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~~--~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ..+...+...||+|.||+||+|.+..  ++|+.      ....+.|..|+.+++.-+|        .||+-+++++.   
T Consensus       390 p~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH--------~NIlLFMG~~~---  458 (678)
T KOG0193|consen  390 PPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRH--------ENILLFMGACM---  458 (678)
T ss_pred             CHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcch--------hhheeeehhhc---
Confidence            34457888999999999999999854  44442      2235778999999999999        77999999885   


Q ss_pred             cCCeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ...+.||+.+|+| +|+.++.-.. ..|....++.|++||+.|+.|||.+ +|||||||..||++..+ +.|+|.|||
T Consensus       459 --~p~~AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~-~kVkIgDFG  533 (678)
T KOG0193|consen  459 --NPPLAIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHED-LKVKIGDFG  533 (678)
T ss_pred             --CCceeeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccC-CcEEEeccc
Confidence              3444999999955 6666654433 4599999999999999999999999 99999999999999554 999999999


Q ss_pred             chhHhh--hCCCCCCcccCCCCccchhhhh
Q psy16752        225 ATELAA--TGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       225 ~a~~~~--~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ++..-.  .+........|..-|||||++.
T Consensus       534 Latvk~~w~g~~q~~qp~gsilwmAPEvIR  563 (678)
T KOG0193|consen  534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIR  563 (678)
T ss_pred             ceeeeeeeccccccCCCccchhhhcHHHHh
Confidence            976432  2222333556788899999986

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.93  E-value=4e-25  Score=194.75  Aligned_cols=161  Identities=25%  Similarity=0.349  Sum_probs=126.0

Q ss_pred             EEecccCceeEEEecce-------eEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         82 RKLGWGHFSTVWFTGSK-------TQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-------~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      .+||+|+||+||+|.++       .+++....  ....+.+|+.+++.++|        +||+++++.+.  ......+|
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~--~~~~~~~~   76 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKH--------PNVISLQKVFL--SHADRKVW   76 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCC--------CCCcceeeeEe--cCCCcEEE
Confidence            58999999999999742       24444332  23467889999999998        66888887664  12456789


Q ss_pred             EEeccCCccHHHHHHhhC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee---CCCcEEEEe
Q psy16752        153 MVFEVLGHNLLKLIVKSK-------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV---DEARVKTLA  222 (284)
Q Consensus       153 iv~e~~~~~l~~~~~~~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~---~~~~v~l~D  222 (284)
                      ++|||+++++...+....       ...+++..++.++.||+.||.|||++ ||+||||||+|||+..   ..+.++|+|
T Consensus        77 lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~~~~~~kl~D  155 (317)
T cd07868          77 LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIAD  155 (317)
T ss_pred             EEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence            999999999988876431       12488999999999999999999999 9999999999999953   346899999


Q ss_pred             ccchhHhhhCCC---CCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHK---LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++........   ......||+.|+|||++.+
T Consensus       156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07868         156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             cCceeccCCCCccccccCCccccccccCCHHHcC
Confidence            999876543322   2235678999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0671|consensus

Probab=99.93  E-value=2.3e-25  Score=191.51  Aligned_cols=182  Identities=27%  Similarity=0.479  Sum_probs=151.3

Q ss_pred             CCCcccccccceeccceEEEEEecccCceeEEEeccee-----EEE---ecCCCChhhHHHHHHHHhhhcCCCCCcccch
Q psy16752         62 KGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKT-----QVL---VSPQFPETALDEIKLLKCVRDGDVNDPYRER  133 (284)
Q Consensus        62 ~~~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~  133 (284)
                      ..+++-..+|+.+.++|.++..+|+|+||.|-.+.++.     +++   .+..+.++..-|++++.++.+.....  .-.
T Consensus        75 ~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g--~~r  152 (415)
T KOG0671|consen   75 KDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNG--KFR  152 (415)
T ss_pred             CCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCC--ceE
Confidence            34567788899999999999999999999999988743     222   34556788888999999997633111  123


Q ss_pred             hccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        134 VVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       134 i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      ++++.+||.    -..+.|||+|.+|.++++++..+...+++...++.++.||+.++.|||+. +++|-||||+|||+.+
T Consensus       153 cv~m~~wFd----yrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILfvs  227 (415)
T KOG0671|consen  153 CVQMRDWFD----YRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILFVS  227 (415)
T ss_pred             EEeeehhhh----ccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEEec
Confidence            778888887    78899999999999999999998888899999999999999999999999 9999999999999953


Q ss_pred             C-------------------CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        214 D-------------------EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       214 ~-------------------~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      .                   ...|+++|||.|.+....   ..+.+.|-.|.|||++-+
T Consensus       228 s~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLg  283 (415)
T KOG0671|consen  228 SEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILG  283 (415)
T ss_pred             cceEEEeccCCccceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheec
Confidence            2                   237899999998766544   367788999999999854

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.93  E-value=3.2e-25  Score=199.97  Aligned_cols=165  Identities=24%  Similarity=0.370  Sum_probs=128.8

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |++.+.||+|+||+||+|.+.     +++|....      ....+.+|+.+++.++|        +||+++++.+.....
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~~~~~   73 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKH--------DNVLSALDILQPPHI   73 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCC--------CCcCCHhheecCCCc
Confidence            788999999999999999862     34444322      12457789999999988        668888887652110


Q ss_pred             -CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 -NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 -~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....+|+||||++++|.+.+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++. .+.++|+|||+
T Consensus        74 ~~~~~~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~-~~~~kL~Dfg~  149 (372)
T cd07853          74 DPFEEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNS-NCVLKICDFGL  149 (372)
T ss_pred             cccceEEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECC-CCCEEeccccc
Confidence             113789999999988888876543  589999999999999999999999 9999999999999954 48999999999


Q ss_pred             hhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +........ ......+|+.|+|||++.+.
T Consensus       150 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (372)
T cd07853         150 ARVEEPDESKHMTQEVVTQYYRAPEILMGS  179 (372)
T ss_pred             eeecccCccccCCCCCcCCCcCCHHHHcCC
Confidence            876543322 22244689999999998653

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG4721|consensus

Probab=99.93  E-value=6.2e-26  Score=203.42  Aligned_cols=158  Identities=20%  Similarity=0.304  Sum_probs=132.8

Q ss_pred             EEEEEecccCceeEEEecceeEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccC
Q psy16752         79 RVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL  158 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~  158 (284)
                      .-++.||.|+.|.||+++.+....++++..+--..+|.-|++|+|        +||+.+.+.+.    ....+|||||||
T Consensus       127 sELeWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH--------~NII~FkGVCt----qsPcyCIiMEfC  194 (904)
T KOG4721|consen  127 SELEWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKH--------PNIITFKGVCT----QSPCYCIIMEFC  194 (904)
T ss_pred             hhhhhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccC--------cceeeEeeeec----CCceeEEeeecc
Confidence            345789999999999998866444444444445667888999998        67999888665    888999999999


Q ss_pred             -CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCC
Q psy16752        159 -GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPV  237 (284)
Q Consensus       159 -~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~  237 (284)
                       .|-|...+....  .+....+..|..+|+.|+.|||.+ .|||||||.-||||+.+ ..|||+|||.+.....- +...
T Consensus       195 a~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~-d~VKIsDFGTS~e~~~~-STkM  269 (904)
T KOG4721|consen  195 AQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYD-DVVKISDFGTSKELSDK-STKM  269 (904)
T ss_pred             ccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeecc-ceEEeccccchHhhhhh-hhhh
Confidence             777777776554  699999999999999999999999 99999999999999665 89999999998877665 5666


Q ss_pred             cccCCCCccchhhhhh
Q psy16752        238 SFCSTAPVQEYSELSR  253 (284)
Q Consensus       238 ~~~gt~~~~aPE~l~~  253 (284)
                      +|+||..|||||++..
T Consensus       270 SFaGTVaWMAPEvIrn  285 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRN  285 (904)
T ss_pred             hhhhhHhhhCHHHhhc
Confidence            8999999999999954

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.92  E-value=3.9e-25  Score=191.73  Aligned_cols=157  Identities=27%  Similarity=0.338  Sum_probs=122.7

Q ss_pred             ecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ||+|+||+||++.++     .+++....       ..+.+..|+.+++.+.|        ++++.+...+.    ....+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~--------~~i~~~~~~~~----~~~~~   68 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS--------RFIVSLAYAFQ----TKTDL   68 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC--------CcEeeeeEEEc----CCCeE
Confidence            799999999998763     23443221       11345679999999987        66888887766    67789


Q ss_pred             EEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        152 CMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      |+||||+ +++|...+...  ....+++..++.++.||+.||.|||+. +|+||||||+||+++. ++.++|+|||++..
T Consensus        69 ~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~  146 (280)
T cd05608          69 CLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDN-DGNVRISDLGLAVE  146 (280)
T ss_pred             EEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECC-CCCEEEeeCcccee
Confidence            9999999 56666655432  223589999999999999999999999 9999999999999954 58899999999876


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............||+.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~g~~~y~aPE~~~~~  172 (280)
T cd05608         147 LKDGQSKTKGYAGTPGFMAPELLQGE  172 (280)
T ss_pred             cCCCCccccccCCCcCccCHHHhcCC
Confidence            55544444466899999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.92  E-value=3e-25  Score=196.38  Aligned_cols=157  Identities=25%  Similarity=0.377  Sum_probs=120.4

Q ss_pred             EEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHH-HHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIK-LLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~-~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||+||+|.++     +++|+....       ...+..|.. +++.++|        ++|+++++.+.    ..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~h--------p~iv~~~~~~~----~~   68 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKH--------PFLVGLHYSFQ----TA   68 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCC--------CCCCCeeEEEE----eC
Confidence            36899999999999873     344443211       122334433 3455666        67888888776    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +++|...+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||++.
T Consensus        69 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~-~~~~kl~Dfg~~~  144 (323)
T cd05575          69 DKLYFVLDYVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDS-QGHVVLTDFGLCK  144 (323)
T ss_pred             CEEEEEEcCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECC-CCcEEEeccCCCc
Confidence            8899999999 667777776543  589999999999999999999999 9999999999999955 4899999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ............+||+.|+|||++.+.
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (323)
T cd05575         145 EGIEHSKTTSTFCGTPEYLAPEVLRKQ  171 (323)
T ss_pred             ccccCCCccccccCChhhcChhhhcCC
Confidence            544443444567899999999998653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0604|consensus

Probab=99.92  E-value=6.9e-26  Score=189.27  Aligned_cols=169  Identities=21%  Similarity=0.247  Sum_probs=137.9

Q ss_pred             cceEEE-EEecccCceeEEEeccee-----EEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         76 NRYRVT-RKLGWGHFSTVWFTGSKT-----QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        76 ~~y~i~-~~LG~G~fg~Vy~a~~~~-----~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      ++|++. ++||-|-.|.|-.+.++.     ++|+. .....+.+|+++--+...       |+||+.+++.|+.......
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL-~Ds~KARrEVeLHw~~s~-------h~~iV~IidVyeNs~~~rk  132 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVL-LDSPKARREVELHWMASG-------HPHIVSIIDVYENSYQGRK  132 (400)
T ss_pred             hhheehhhhhccccCCceEEEEeccchhhhHHHHH-hcCHHHHhHhhhhhhhcC-------CCceEEeehhhhhhccCce
Confidence            468774 679999999998887654     22222 234556777776444433       5889999999887667888


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcEEEEeccch
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARVKTLALNAT  226 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v~l~Dfg~a  226 (284)
                      .+.+|||++ ||.|+..+..++...|++.++..|+.||+.|+.|||+. +|.||||||+|+|.+..  +..+||+|||+|
T Consensus       133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~na~lKLtDfGFA  211 (400)
T KOG0604|consen  133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSPNAPLKLTDFGFA  211 (400)
T ss_pred             eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCCCcceEecccccc
Confidence            999999999 89999999998877899999999999999999999999 99999999999999644  569999999999


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..... ....+.|+||.|+|||++...
T Consensus       212 K~t~~~-~~L~TPc~TPyYvaPevlg~e  238 (400)
T KOG0604|consen  212 KETQEP-GDLMTPCFTPYYVAPEVLGPE  238 (400)
T ss_pred             cccCCC-ccccCCcccccccCHHHhCch
Confidence            876653 344578999999999999653

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.92  E-value=7.3e-25  Score=212.21  Aligned_cols=165  Identities=21%  Similarity=0.295  Sum_probs=128.2

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.++||+|+||.||+|.+.     +++|....       ....+.+|+.+++.+.|        +|++++++.+. 
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H--------PNIVkl~~v~~-   72 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH--------PGIVPVYSICS-   72 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC--------cCcCeEEEEEe-
Confidence            47999999999999999999763     34554322       12457889999999988        66888888765 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSK---------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                         .....|+||||+ +++|.+.+....         ...++...+..++.||+.||.|||++ ||+||||||+|||++.
T Consensus        73 ---d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPeNILLd~  148 (932)
T PRK13184         73 ---DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPDNILLGL  148 (932)
T ss_pred             ---eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchheEEEcC
Confidence               677899999999 677777665321         12356778899999999999999999 9999999999999955


Q ss_pred             CCCcEEEEeccchhHhhhC------------------CCCCCcccCCCCccchhhhhhc
Q psy16752        214 DEARVKTLALNATELAATG------------------HKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~------------------~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      + +.++++|||++......                  ...+...+||+.|+|||++.+.
T Consensus       149 d-g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~  206 (932)
T PRK13184        149 F-GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV  206 (932)
T ss_pred             C-CCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC
Confidence            4 88999999998755211                  1112245799999999987654

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.92  E-value=4.4e-25  Score=194.95  Aligned_cols=158  Identities=27%  Similarity=0.337  Sum_probs=123.9

Q ss_pred             EEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +.||+|+||+||+|.++     +++++...       ....+..|..++..+.+       |++|+++++.+.    ...
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~-------h~~i~~~~~~~~----~~~   69 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGK-------HPFLTQLHSCFQ----TKD   69 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccC-------CCCccceeeEEE----cCC
Confidence            36999999999999763     34444321       12345667778777642       377999998876    777


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|...+....  .+++..+..++.||+.||.|||+. +|+||||||+|||++. .+.++|+|||++..
T Consensus        70 ~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~  145 (318)
T cd05570          70 RLFFVMEYVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDS-EGHIKIADFGMCKE  145 (318)
T ss_pred             EEEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECC-CCcEEecccCCCee
Confidence            899999999 667777665543  599999999999999999999999 9999999999999955 48999999999875


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...........+||+.|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~g~~~y~aPE~~~~~  171 (318)
T cd05570         146 GILGGVTTSTFCGTPDYIAPEILSYQ  171 (318)
T ss_pred             cCcCCCcccceecCccccCHHHhcCC
Confidence            44333344466899999999998654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.92  E-value=6.9e-25  Score=213.35  Aligned_cols=173  Identities=21%  Similarity=0.306  Sum_probs=133.2

Q ss_pred             ccceeccceEEEEEecccCceeEEEeccee-----EEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      .+..+.++|.+++.||.|+||+||+|.++.     ++++...      ....+..|+.+++.+.|        ++|++++
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~H--------PNIVrl~   78 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKH--------KNIVRYI   78 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCC--------CCcCeEE
Confidence            455566789999999999999999998732     3333221      23457789999999998        6699998


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCC------CcEecCCCCCCe
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKC------RIIHTDIKPENV  209 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~------givHrDiKp~NI  209 (284)
                      +.|.  ......+||||||+ +++|.+.+....  ...+++..+..|+.||+.||.|||...      +||||||||+||
T Consensus        79 d~f~--de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNI  156 (1021)
T PTZ00266         79 DRFL--NKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNI  156 (1021)
T ss_pred             EEEE--ecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHe
Confidence            8764  22456799999999 678888776531  235999999999999999999999840      499999999999


Q ss_pred             eEeeC----------------CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        210 LLCVD----------------EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       210 ll~~~----------------~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||+.+                ...++|+|||++...... .......||+.|+|||++.+
T Consensus       157 LL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~-s~~~s~vGTp~YmAPEvL~g  215 (1021)
T PTZ00266        157 FLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE-SMAHSCVGTPYYWSPELLLH  215 (1021)
T ss_pred             EeecCccccccccccccccCCCCceEEccCCcccccccc-ccccccCCCccccCHHHHhc
Confidence            99642                235899999998765433 23345679999999999853

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.92  E-value=5.6e-25  Score=198.58  Aligned_cols=163  Identities=21%  Similarity=0.283  Sum_probs=126.0

Q ss_pred             cceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++.+.||+|+||.||+|.+          .++++.....     ...+.+|+.+++.+ .|        +||+++++
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h--------~nIv~~~~  109 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH--------KNIVNLLG  109 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccC--------CceeeEee
Confidence            4699999999999999999874          2344443321     23467899999998 66        77999998


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhC------------------------------------------------
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK------------------------------------------------  170 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------------  170 (284)
                      .+.    ....+|+||||+ +|+|.+++....                                                
T Consensus       110 ~~~----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (374)
T cd05106         110 ACT----HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMR  185 (374)
T ss_pred             Eec----CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccC
Confidence            776    677899999999 778888775421                                                


Q ss_pred             --------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        171 --------------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       171 --------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                                          ..++++..+..++.||+.||.|||++ ||+||||||+|||++ +++.++|+|||++....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~-~~~~~kL~DfGla~~~~  263 (374)
T cd05106         186 PVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLT-DGRVAKICDFGLARDIM  263 (374)
T ss_pred             CccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEe-CCCeEEEeeceeeeecc
Confidence                                12377888999999999999999999 999999999999995 45899999999987554


Q ss_pred             hCCCC--CCcccCCCCccchhhhh
Q psy16752        231 TGHKL--PVSFCSTAPVQEYSELS  252 (284)
Q Consensus       231 ~~~~~--~~~~~gt~~~~aPE~l~  252 (284)
                      .....  ..+..++..|+|||++.
T Consensus       264 ~~~~~~~~~~~~~~~~y~aPE~~~  287 (374)
T cd05106         264 NDSNYVVKGNARLPVKWMAPESIF  287 (374)
T ss_pred             CCcceeeccCCCCccceeCHHHhc
Confidence            33211  12233556799999764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=3.9e-25  Score=197.15  Aligned_cols=162  Identities=25%  Similarity=0.390  Sum_probs=128.1

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++++.||.|+||+||+|.+.     +++|....      ....+.+|+.+++.+.|        +||+++++.+...
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~~~   86 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKH--------ENVIGLLDVFTPA   86 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCC--------Cchhhhhhhhccc
Confidence            57999999999999999999762     34444322      12346689999999988        6688888776421


Q ss_pred             c--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        145 G--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       145 ~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                      .  ......|++|+++++++.+.+...   .+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~-~~~~kl~D  161 (343)
T cd07878          87 TSIENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNE-DCELRILD  161 (343)
T ss_pred             ccccccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECC-CCCEEEcC
Confidence            1  123568999999988887766432   499999999999999999999999 9999999999999955 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++......   .....||+.|+|||++.+
T Consensus       162 fg~~~~~~~~---~~~~~~t~~y~aPE~~~~  189 (343)
T cd07878         162 FGLARQADDE---MTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             CccceecCCC---cCCccccccccCchHhcC
Confidence            9998754432   235678999999999865

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0662|consensus

Probab=99.92  E-value=8.9e-26  Score=176.34  Aligned_cols=163  Identities=25%  Similarity=0.359  Sum_probs=137.6

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEe------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLV------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .|.-.++||+|.||+||+|+++.     +++.      ....+...++|+-+++.+.|        .||+++++...   
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkh--------knivrl~dvlh---   71 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH--------KNIVRLHDVLH---   71 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhh--------cceeehhhhhc---
Confidence            47778899999999999998754     2221      23346678999999999999        77999999877   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....+-+|+|||...|..++....+ .++.+.++.++.|++.||.|+|++ .++|||+||.|+||+.+ +.++++|||+
T Consensus        72 -sdkkltlvfe~cdqdlkkyfdslng-~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~n-gelkladfgl  147 (292)
T KOG0662|consen   72 -SDKKLTLVFEFCDQDLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRN-GELKLADFGL  147 (292)
T ss_pred             -cCceeEEeHHHhhHHHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccC-CcEEecccch
Confidence             7788999999999999999987664 599999999999999999999999 99999999999999655 9999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++-.+-+...-+..+-|.+|..|.++-+.
T Consensus       148 arafgipvrcysaevvtlwyrppdvlfga  176 (292)
T KOG0662|consen  148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGA  176 (292)
T ss_pred             hhhcCCceEeeeceeeeeeccCcceeeee
Confidence            98776554444455678899999988664

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.92  E-value=9.3e-25  Score=191.15  Aligned_cols=164  Identities=27%  Similarity=0.371  Sum_probs=132.6

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|.+.+.||.|+||.||+|.++     ++++...     .....+.+|+.+++.++|        +||+++++.+.   
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~nI~~~~~~~~---   74 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH--------ANIVTLHDIIH---   74 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC--------CCcceEEEEEe---
Confidence            36999999999999999999763     2334322     123456789999999988        66999998876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....|+||||+.+++.+.+.... ..+++..+..++.||+.||.|||+. ||+|+||||+||+++.+ +.++++|||+
T Consensus        75 -~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~-~~~kl~dfg~  150 (301)
T cd07873          75 -TEKSLTLVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINER-GELKLADFGL  150 (301)
T ss_pred             -cCCeEEEEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCC-CcEEECcCcc
Confidence             677899999999989988886643 3589999999999999999999999 99999999999999554 7999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|+|||++.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  179 (301)
T cd07873         151 ARAKSIPTKTYSNEVVTLWYRPPDILLGS  179 (301)
T ss_pred             hhccCCCCCcccccceeecccCcHHHhCC
Confidence            87654433333445678999999987653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=1.4e-24  Score=202.54  Aligned_cols=169  Identities=24%  Similarity=0.277  Sum_probs=128.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|+||+||+|.+.     +++|.....      ...+.+|+.++..+.|        ++++.++..+...
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h--------~~iv~~~~~~~~~  103 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDF--------FSIVKCHEDFAKK  103 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCC--------CcEEEeecceecc
Confidence            57999999999999999999762     355543221      2345678888888777        5577776655422


Q ss_pred             cc----CCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        145 GV----NGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       145 ~~----~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      ..    ....+++||||+ +|+|.+.+....  ...+++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NILl~~~-~~  181 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANILLCSN-GL  181 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEeCC-CC
Confidence            11    223578999999 778888776432  24589999999999999999999999 99999999999999654 89


Q ss_pred             EEEEeccchhHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|+|||++.......  ....+.+||+.|+|||++.+.
T Consensus       182 vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~  220 (496)
T PTZ00283        182 VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRK  220 (496)
T ss_pred             EEEEecccCeeccccccccccccccCCcceeCHHHhCCC
Confidence            9999999987654321  223467899999999998754

>KOG4279|consensus

Probab=99.92  E-value=9.6e-25  Score=199.63  Aligned_cols=158  Identities=23%  Similarity=0.332  Sum_probs=135.5

Q ss_pred             EecccCceeEEEeccee-----EEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEE
Q psy16752         83 KLGWGHFSTVWFTGSKT-----QVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCM  153 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~~-----~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~i  153 (284)
                      +||+|.||+||-|++..     ++|-.+    ...+.+..||.+-+.++|        .||+++++.+.    ...++-|
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrH--------kNIVrYLGs~s----enGf~kI  649 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRH--------KNIVRYLGSVS----ENGFFKI  649 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhh--------HhHHHHhhccC----CCCeEEE
Confidence            79999999999999832     333322    234667889999999999        78999999866    7778999


Q ss_pred             EeccCCccHHHHHHhhCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhh
Q psy16752        154 VFEVLGHNLLKLIVKSKYRGI--PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAAT  231 (284)
Q Consensus       154 v~e~~~~~l~~~~~~~~~~~~--~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~  231 (284)
                      .||-..|+.+..+.+...+++  ++..+-.|.+||++||.|||.. .|||||||-+|+||+.=.|.+||.|||.++....
T Consensus       650 FMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg  728 (1226)
T KOG4279|consen  650 FMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG  728 (1226)
T ss_pred             EeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence            999996555556666666677  8999999999999999999999 9999999999999977789999999999999988


Q ss_pred             CCCCCCcccCCCCccchhhhhh
Q psy16752        232 GHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       232 ~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      -...+.++.||..|||||++..
T Consensus       729 inP~TETFTGTLQYMAPEvIDq  750 (1226)
T KOG4279|consen  729 INPCTETFTGTLQYMAPEVIDQ  750 (1226)
T ss_pred             CCccccccccchhhhChHhhcc
Confidence            8888889999999999999864

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.92  E-value=2.6e-25  Score=199.15  Aligned_cols=159  Identities=23%  Similarity=0.283  Sum_probs=126.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+|++++.||+|+||.||+|.+.     +++|+....     ...+.+|+.+++.++|        +||+++++.+.   
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~---  142 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH--------PNVVKCHDMFD---  142 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC--------CCcceeeeEec---
Confidence            35889999999999999999763     345543221     2457789999999988        66899888776   


Q ss_pred             cCCeEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+. ++|...      ...++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|||
T Consensus       143 -~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~-~~~~kL~DfG  213 (353)
T PLN00034        143 -HNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINS-AKNVKIADFG  213 (353)
T ss_pred             -cCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcC-CCCEEEcccc
Confidence             7788999999994 454321      2357788899999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++..............||..|+|||++...
T Consensus       214 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  243 (353)
T PLN00034        214 VSRILAQTMDPCNSSVGTIAYMSPERINTD  243 (353)
T ss_pred             cceecccccccccccccCccccCccccccc
Confidence            987665443334456799999999988543

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.92  E-value=1.6e-24  Score=187.74  Aligned_cols=162  Identities=25%  Similarity=0.366  Sum_probs=131.8

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||.|+||.||+|.++     .+++...      .....+.+|+.+++.++|        ++++++++.+.   
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h--------~~i~~~~~~~~---   69 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH--------KNIVRLYDVLH---   69 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCC--------CCeeeHHHHhc---
Confidence            4899999999999999999873     2333321      123456789999999988        66899888876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....+|+|+||+++++.+.+.... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.+ +.++|+|||+
T Consensus        70 -~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~-~~~~l~dfg~  145 (284)
T cd07839          70 -SDKKLTLVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKN-GELKLADFGL  145 (284)
T ss_pred             -cCCceEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCC-CcEEECccch
Confidence             677899999999989988876543 3589999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............+++.|+|||++.+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  173 (284)
T cd07839         146 ARAFGIPVRCYSAEVVTLWYRPPDVLFG  173 (284)
T ss_pred             hhccCCCCCCcCCCccccCCcChHHHhC
Confidence            8765444333334567899999998855

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.92  E-value=1.4e-24  Score=186.65  Aligned_cols=163  Identities=15%  Similarity=0.157  Sum_probs=123.7

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .+|++.+.||+|+||.||+|.++        .+++.....     ...+.+|+.++..++|        ++++++++.+.
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~   76 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH--------SNIVRLEGVIT   76 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC--------CCcCeEEEEEe
Confidence            46999999999999999998642        233332221     2356789999998887        66999888766


Q ss_pred             EeccCCeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          .....++||||+++ +|.+++... ...+++..+..++.||+.||.|||++ |++||||||+|||++. ++.++++
T Consensus        77 ----~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~-~~~~~l~  149 (266)
T cd05064          77 ----RGNTMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNS-DLVCKIS  149 (266)
T ss_pred             ----cCCCcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcC-CCcEEEC
Confidence                67789999999955 555555443 34589999999999999999999999 9999999999999955 4899999


Q ss_pred             eccchhHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.+........ ......++..|+|||++.+
T Consensus       150 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (266)
T cd05064         150 GFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY  182 (266)
T ss_pred             CCcccccccccchhcccCCCCceeecCHHHHhh
Confidence            9997654432211 1112345678999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.92  E-value=1.6e-24  Score=187.69  Aligned_cols=164  Identities=25%  Similarity=0.338  Sum_probs=131.8

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|++|.||+|.++     ++++....      ....+.+|+.+++.++|        ++++++++.+.   
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~---   69 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH--------PNIVCLQDVLM---   69 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC--------CCEeeeEEEEe---
Confidence            4899999999999999999763     23443211      23457789999999988        66999998876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+.+++.+.+..... ..+++..+..++.||+.||.|||+. +++||||+|+||+++. ++.++|+|||
T Consensus        70 -~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~-~~~~~l~dfg  146 (285)
T cd07861          70 -QESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDN-KGVIKLADFG  146 (285)
T ss_pred             -eCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcC-CCcEEECccc
Confidence             6778999999998888888765432 4589999999999999999999999 9999999999999955 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++..............+++.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (285)
T cd07861         147 LARAFGIPVRVYTHEVVTLWYRAPEVLLGS  176 (285)
T ss_pred             ceeecCCCcccccCCcccccccChHHhcCC
Confidence            987554433333344678999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG4250|consensus

Probab=99.92  E-value=5.7e-25  Score=201.73  Aligned_cols=166  Identities=23%  Similarity=0.318  Sum_probs=133.4

Q ss_pred             eEEEEEecccCceeEEEeccee-----EEEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe--c
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT-----QVLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC--G  145 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~--~  145 (284)
                      |...+.||+||||.||+++++.     ++|..     ....+...+|+++|++++|        +|||++++.-+..  +
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh--------~NIVk~f~iee~~~~~   86 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNH--------PNIVKLFDIEETKFLG   86 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCc--------hhhhhhcccCCccccC
Confidence            6677899999999999999743     33332     2234667899999999998        6799888754311  1


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC---CcEEE
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKS-KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE---ARVKT  220 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~---~~v~l  220 (284)
                      .-.....+||||| +|+|...+.+- +..++++..++.++..++.||.|||.. |||||||||+||++....   ..-||
T Consensus        87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Gedgq~IyKL  165 (732)
T KOG4250|consen   87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGEDGQSIYKL  165 (732)
T ss_pred             cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecCCCceEEee
Confidence            1245678999999 77888777652 234699999999999999999999999 999999999999996543   37899


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|||.|+-...+. ...++.||+.|.+||++++
T Consensus       166 tDfG~Arel~d~s-~~~S~vGT~~YLhPel~E~  197 (732)
T KOG4250|consen  166 TDFGAARELDDNS-LFTSLVGTEEYLHPELYER  197 (732)
T ss_pred             ecccccccCCCCC-eeeeecCchhhcChHHHhh
Confidence            9999999887774 6668899999999999996

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.92  E-value=1.1e-24  Score=196.74  Aligned_cols=164  Identities=20%  Similarity=0.242  Sum_probs=126.8

Q ss_pred             cceEEEEEecccCceeEEEecc----------eeEEEecCC-----CChhhHHHHHHHHhh-hcCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQ-----FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~-----~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++.+.||+|+||.||+|.+          ..++|+...     ..+.+.+|+.++..+ .|        +||+++++
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~H--------pnIv~l~~  106 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--------INIVNLLG  106 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCC--------cceeeeee
Confidence            4699999999999999999863          234444322     124567899999998 56        77999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhC------------------------------------------------
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK------------------------------------------------  170 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------------  170 (284)
                      .+.    .....++||||+ +|+|.+++....                                                
T Consensus       107 ~~~----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  182 (375)
T cd05104         107 ACT----VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTK  182 (375)
T ss_pred             eec----cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccc
Confidence            876    777899999999 778888775422                                                


Q ss_pred             -------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        171 -------------------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       171 -------------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                                               ...+++..+..++.||+.||.|||+. ||+||||||+|||++ +...++|+|||+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~-~~~~~kl~DfG~  260 (375)
T cd05104         183 ADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLT-HGRITKICDFGL  260 (375)
T ss_pred             cccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEE-CCCcEEEecCcc
Confidence                                     11367888999999999999999999 999999999999995 457899999999


Q ss_pred             hhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      +.........  .....++..|+|||++.+
T Consensus       261 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  290 (375)
T cd05104         261 ARDIRNDSNYVVKGNARLPVKWMAPESIFN  290 (375)
T ss_pred             ceeccCcccccccCCCCCCcceeChhHhcC
Confidence            8755433221  123345667999998743

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0696|consensus

Probab=99.92  E-value=4.5e-25  Score=191.51  Aligned_cols=164  Identities=21%  Similarity=0.255  Sum_probs=134.4

Q ss_pred             ccceEEEEEecccCceeEEEeccee-----EEEe-------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT-----QVLV-------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~-------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ..+|..+.+||.|+||.|.+|..+.     ++++       .....+....|-++|..-..+       |.++++...|.
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kp-------pFL~qlHScFQ  420 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP-------PFLVQLHSCFQ  420 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCC-------chHHHHHHHhh
Confidence            3469999999999999999997643     2222       122233345666677655443       66888888776


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          +-+.+|+||||+ ||+|.-.+.+-+  .+.+..+..|+.+|+.||-|||++ |||+||||.+|||++.+ ++++|.
T Consensus       421 ----TmDRLyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~e-GHiKi~  492 (683)
T KOG0696|consen  421 ----TMDRLYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSE-GHIKIA  492 (683)
T ss_pred             ----hhhheeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccC-CceEee
Confidence                889999999999 777777776543  599999999999999999999999 99999999999999655 999999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.++....+...+.++||||-|+|||++.-
T Consensus       493 DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~Y  524 (683)
T KOG0696|consen  493 DFGMCKENIFDGVTTKTFCGTPDYIAPEIIAY  524 (683)
T ss_pred             ecccccccccCCcceeeecCCCcccccceEEe
Confidence            99999988888888889999999999999864

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.92  E-value=1.6e-24  Score=208.69  Aligned_cols=160  Identities=21%  Similarity=0.311  Sum_probs=131.6

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|.+++.||.|+||+||+|.+.     +++|+....       ...+..|+.++..++|        ++|++++..+. 
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~Iv~~~~~~~-   74 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS--------PFIVHLYYSLQ-   74 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC--------CCcCeEEEEEE-
Confidence            46999999999999999999874     355554322       2567788899998888        66888887665 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ...++|+||||+ +++|.+++....  .+++..++.++.||+.||.|||.. +||||||||+||||+. .+.++|+|
T Consensus        75 ---~~~~~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~-~g~vkL~D  147 (669)
T cd05610          75 ---SANNVYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISN-EGHIKLTD  147 (669)
T ss_pred             ---ECCEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcC-CCCEEEEe
Confidence               677899999999 778877776543  489999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhh
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSEL  251 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l  251 (284)
                      ||++..............+|++|++||..
T Consensus       148 FGls~~~~~~~~~~~~~~~t~~~~~pe~~  176 (669)
T cd05610         148 FGLSKVTLNRELNMMDILTTPSMAKPKND  176 (669)
T ss_pred             CCCCccccCCcccccccccCccccCcccc
Confidence            99998776655555567889999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.92  E-value=2.4e-24  Score=187.29  Aligned_cols=161  Identities=24%  Similarity=0.282  Sum_probs=126.4

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      |+..+.||.|+||+||+|.+.     .+++....       ....+.+|+.+++.++|        ++++.+++.+.   
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~--------~~i~~~~~~~~---   70 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNS--------QFVVNLAYAYE---   70 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCC--------cCceeEEEEEe---
Confidence            788899999999999999773     23443221       12346789999999988        56888777665   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +++|...+.......+++..+..++.|++.||.|||+. ||+||||||+||+++.+ +.++|+|||
T Consensus        71 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~-~~~kl~Dfg  147 (285)
T cd05632          71 -TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDY-GHIRISDLG  147 (285)
T ss_pred             -cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCC-CCEEEecCC
Confidence             677899999999 56676666554444699999999999999999999999 99999999999999544 789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++...... .......|++.|+|||++.+
T Consensus       148 ~~~~~~~~-~~~~~~~g~~~~~aPE~~~~  175 (285)
T cd05632         148 LAVKIPEG-ESIRGRVGTVGYMAPEVLNN  175 (285)
T ss_pred             cceecCCC-CcccCCCCCcCccChHHhcC
Confidence            88654322 22234578999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.92  E-value=2.3e-24  Score=183.89  Aligned_cols=159  Identities=32%  Similarity=0.475  Sum_probs=128.9

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCCCCh------hhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFPE------TALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~------~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |++.+.||+|+||+||++.+.     .++++......      ...+|+.+++.++|        ++|+++++.+.    
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~--------~~i~~~~~~~~----   68 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH--------PNIVQILDVFQ----   68 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB--------TTBCHEEEEEE----
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc--------ccccccccccc----
Confidence            889999999999999999872     35554433321      12348899999987        66899888776    


Q ss_pred             CCeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+++|||++.+ +|.+.+....  .+++..+..++.||+.||.+||+. +|+|+||||+||+++ .++.++|+|||.
T Consensus        69 ~~~~~~~v~~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~-~~~~~~l~Dfg~  144 (260)
T PF00069_consen   69 DDNYLYIVMEYCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLD-ENGEVKLIDFGS  144 (260)
T ss_dssp             ESSEEEEEEEEETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEES-TTSEEEESSGTT
T ss_pred             ccccccccccccccccccccccccc--cccccccccccccccccccccccc-ccccccccccccccc-cccccccccccc
Confidence            68889999999955 8888887443  489999999999999999999999 999999999999996 568999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      +..............+++.|.|||++.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  171 (260)
T PF00069_consen  145 SVKLSENNENFNPFVGTPEYMAPEVLQ  171 (260)
T ss_dssp             TEESTSTTSEBSSSSSSGGGSCHHHHT
T ss_pred             ccccccccccccccccccccccccccc
Confidence            875433333444667899999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.92  E-value=3.9e-24  Score=182.51  Aligned_cols=164  Identities=21%  Similarity=0.311  Sum_probs=132.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++.+.||.|+||.||++.+.     .+++...     ...+.+..|+.+++.+.|        +|++++++.+.    
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----   68 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKH--------PNIVAFKESFE----   68 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCC--------CCcceEEEEEE----
Confidence            4899999999999999999763     2334321     123556788999999988        66888888776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||+ ++++.+++.......+++..+..++.||+.||.|||+. ||+|+||||+||+++. ++.++++|||.
T Consensus        69 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~-~~~~~l~dfg~  146 (255)
T cd08219          69 ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQ-NGKVKLGDFGS  146 (255)
T ss_pred             ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECC-CCcEEEcccCc
Confidence            778999999999 67888877665445589999999999999999999999 9999999999999954 58999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............|++.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  175 (255)
T cd08219         147 ARLLTSPGAYACTYVGTPYYVPPEIWENM  175 (255)
T ss_pred             ceeecccccccccccCCccccCHHHHccC
Confidence            87665443344456789999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.92  E-value=3e-24  Score=186.68  Aligned_cols=161  Identities=24%  Similarity=0.278  Sum_probs=126.8

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      |++.+.||+|+||.||+|.++     ++++....       ....+..|+.+++.++|        ++++.+++.+.   
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~--------~~i~~~~~~~~---   70 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNS--------RFVVSLAYAYE---   70 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCC--------CCeeeeeEEEe---
Confidence            788899999999999998773     23333211       12345679999999988        56888887765   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +++|.+.+.......+++..+..++.|++.||.|||+. +|+||||||+||+++. .+.++++|||
T Consensus        71 -~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~-~~~~~l~Dfg  147 (285)
T cd05630          71 -TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDD-HGHIRISDLG  147 (285)
T ss_pred             -cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECC-CCCEEEeecc
Confidence             677899999999 66777777554444589999999999999999999999 9999999999999954 4789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++....... ......|+..|+|||++.+
T Consensus       148 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~  175 (285)
T cd05630         148 LAVHVPEGQ-TIKGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             ceeecCCCc-cccCCCCCccccChHHHcC
Confidence            886544332 2224578999999999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0666|consensus

Probab=99.92  E-value=7.1e-25  Score=184.13  Aligned_cols=166  Identities=27%  Similarity=0.399  Sum_probs=135.0

Q ss_pred             ceEEEEEecccCceeEEEeccee---------EEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT---------QVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~---------~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .|.++..||+|+||.||+|..+.         +++..      ......+.+|+.+++.++|        +|++.+...|
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h--------~nvi~Lv~Vf   96 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKH--------PNVISLVKVF   96 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcC--------CcchhHHHHH
Confidence            49999999999999999995421         11111      1235678999999999999        6688887776


Q ss_pred             eEeccCCeEEEEEeccCCccHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC---C
Q psy16752        142 KICGVNGTHVCMVFEVLGHNLLKLIVKSK---YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD---E  215 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~---~  215 (284)
                      ..   ....+++++||...+|++.+..+.   .+.++...++.++.||+.|+.|||+. -|+||||||.||||.-+   .
T Consensus        97 l~---~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlvmgdgper  172 (438)
T KOG0666|consen   97 LS---HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILVMGDGPER  172 (438)
T ss_pred             hc---cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEEeccCCcc
Confidence            51   378899999999999999887653   24589999999999999999999999 89999999999999654   4


Q ss_pred             CcEEEEeccchhHhhhCCCCCC---cccCCCCccchhhhhhc
Q psy16752        216 ARVKTLALNATELAATGHKLPV---SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~~~~---~~~gt~~~~aPE~l~~~  254 (284)
                      +.|||+|||+++....+.....   .++-|.+|.|||.|-|.
T Consensus       173 G~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa  214 (438)
T KOG0666|consen  173 GRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGA  214 (438)
T ss_pred             CeeEeecccHHHHhhccccccccCCceEEEEEecChHHhccc
Confidence            7999999999998876654432   45779999999998764

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.92  E-value=4e-24  Score=186.78  Aligned_cols=182  Identities=15%  Similarity=0.153  Sum_probs=122.4

Q ss_pred             cccceeccceEEEEEecccCceeEEEeccee--------EEEecCCCChhhHHHHHHHHhhhcC-------CCCCcccch
Q psy16752         69 KIGMLFNNRYRVTRKLGWGHFSTVWFTGSKT--------QVLVSPQFPETALDEIKLLKCVRDG-------DVNDPYRER  133 (284)
Q Consensus        69 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~--------~~~~~~~~~~~~~~E~~~l~~l~~~-------~~~~~~~~~  133 (284)
                      .+.++..++|++.+.||+|+||+||+|....        ++++..........|...+..+.+.       ......|++
T Consensus         5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~   84 (294)
T PHA02882          5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG   84 (294)
T ss_pred             eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence            3445566789999999999999999997522        2332222222233333332222110       011122366


Q ss_pred             hccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        134 VVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       134 i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      ++.+++..........+.+++|+++..++.+.+....  ..++..+..++.|++.||.|||+. +|+||||||+|||++.
T Consensus        85 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nill~~  161 (294)
T PHA02882         85 IPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIMVDG  161 (294)
T ss_pred             CCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcC
Confidence            7777765432222334668899988777777665532  367888999999999999999999 9999999999999955


Q ss_pred             CCCcEEEEeccchhHhhhCC-------CCCCcccCCCCccchhhhhhc
Q psy16752        214 DEARVKTLALNATELAATGH-------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~~-------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                       .+.++|+|||+|.......       .......||+.|+|||++.+.
T Consensus       162 -~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~  208 (294)
T PHA02882        162 -NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA  208 (294)
T ss_pred             -CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC
Confidence             4789999999987654322       112235799999999976543

>KOG0587|consensus

Probab=99.92  E-value=3.4e-24  Score=200.36  Aligned_cols=169  Identities=23%  Similarity=0.305  Sum_probs=141.9

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEec---CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc-C
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVS---PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV-N  147 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~-~  147 (284)
                      .|.+.+.||.|.+|.||+++.+.     ++++.   ....+.+..|.++++...+       |+|++.++++|....+ .
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~-------hpnv~~fyg~~~k~~~~~   92 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSH-------HPNVATFYGAFIKKDPGN   92 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccC-------CCCcceEEEEEEEecCCC
Confidence            48999999999999999998743     33432   3345667778888887766       5889999998875444 6


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ++.+|+||||| +|+..+++....+.++.|..+..|++.++.||.+||.. .++|||||=.|||++.+ +.|||+|||.+
T Consensus        93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e-~~VKLvDFGvS  170 (953)
T KOG0587|consen   93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTEN-AEVKLVDFGVS  170 (953)
T ss_pred             CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEecc-CcEEEeeeeee
Confidence            68999999999 55666666666667799999999999999999999999 99999999999999665 89999999999


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...........++.|||.|||||+++..
T Consensus       171 aQldsT~grRnT~iGtP~WMAPEViac~  198 (953)
T KOG0587|consen  171 AQLDSTVGRRNTFIGTPYWMAPEVIACD  198 (953)
T ss_pred             eeeecccccccCcCCCcccccceeeecc
Confidence            9888887888899999999999998753

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.91  E-value=5.4e-24  Score=185.28  Aligned_cols=164  Identities=27%  Similarity=0.364  Sum_probs=131.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++.+.||+|+||.||+|.++     .++|....     ....+.+|+.+++.++|        +|++++++.+.   
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~ni~~~~~~~~---   73 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH--------ANIVLLHDIIH---   73 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC--------CCEeEEEEEEe---
Confidence            46999999999999999999652     34444321     12356789999999988        66888888776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....|+||||++++++..+.... ..+++..+..++.||+.||.|||+. ||+|+||||+||+++. .+.++|+|||+
T Consensus        74 -~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~-~~~~~l~Dfg~  149 (291)
T cd07870          74 -TKETLTFVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISY-LGELKLADFGL  149 (291)
T ss_pred             -cCCeEEEEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcC-CCcEEEecccc
Confidence             677899999999989988876543 3478899999999999999999999 9999999999999954 48999999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|+|||.+.+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (291)
T cd07870         150 ARAKSIPSQTYSSEVVTLWYRPPDVLLGA  178 (291)
T ss_pred             ccccCCCCCCCCCccccccccCCceeecC
Confidence            87544333333445678999999988653

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.91  E-value=7.5e-24  Score=184.62  Aligned_cols=165  Identities=24%  Similarity=0.321  Sum_probs=132.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|++|+||+|.++     .+++....      ....+..|+.+++.++|        ++++++++.+.  
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~--   71 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH--------GNIVRLQDVVH--   71 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC--------CCEeeEEEEEe--
Confidence            36999999999999999999763     23333211      12456789999999988        66999998776  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        .....|+||||+++++.+.+.......+++..+..++.||+.||.|||++ +++||||+|+||+++.++..++++|||
T Consensus        72 --~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~~~kl~dfg  148 (294)
T PLN00009         72 --SEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFG  148 (294)
T ss_pred             --cCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCCEEEEcccc
Confidence              67899999999988998888765544468899999999999999999999 999999999999997666789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++..............+++.|+|||++.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  177 (294)
T PLN00009        149 LARAFGIPVRTFTHEVVTLWYRAPEILLG  177 (294)
T ss_pred             cccccCCCccccccCceeecccCHHHHhC
Confidence            98755433222334567889999998854

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.91  E-value=3.6e-24  Score=194.68  Aligned_cols=164  Identities=18%  Similarity=0.222  Sum_probs=128.0

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCC-----CChhhHHHHHHHHhhh-cCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQ-----FPETALDEIKLLKCVR-DGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~-----~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++.+.||+|+||.||+|.+.          +++|....     ..+.+.+|+.+++.+. |        +||+++++
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H--------pnIv~l~~  108 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH--------LNIVNLLG  108 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC--------CCeeeEEE
Confidence            56999999999999999998752          34444322     1245778999999996 6        77999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhC------------------------------------------------
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK------------------------------------------------  170 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------------  170 (284)
                      ++.    ....+|+||||+ +|+|.+++....                                                
T Consensus       109 ~~~----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (400)
T cd05105         109 ACT----KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQAD  184 (400)
T ss_pred             EEc----cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccc
Confidence            876    677899999999 778877765421                                                


Q ss_pred             ----------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCC
Q psy16752        171 ----------------------------------------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI  204 (284)
Q Consensus       171 ----------------------------------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDi  204 (284)
                                                                    ...+++..+..++.||+.||.|||.. +|+||||
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~di  263 (400)
T cd05105         185 TTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-NCVHRDL  263 (400)
T ss_pred             ccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCC
Confidence                                                          12377888899999999999999999 9999999


Q ss_pred             CCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        205 KPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       205 Kp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||+|||++. ++.++++|||++........  ......+++.|+|||++.+
T Consensus       264 kp~Nill~~-~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  313 (400)
T cd05105         264 AARNVLLAQ-GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD  313 (400)
T ss_pred             ChHhEEEeC-CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC
Confidence            999999955 47899999999875543222  2224456788999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG2345|consensus

Probab=99.91  E-value=2e-24  Score=176.22  Aligned_cols=172  Identities=25%  Similarity=0.234  Sum_probs=133.3

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEE---e-cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE-e
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVL---V-SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI-C  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~---~-~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~-~  144 (284)
                      +.||++.+.||+|||+-||++..-     +++|   . .....+..++|++..+++++        ++++++++.... .
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s--------~~vl~l~dh~l~~~   91 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNS--------PNVLRLVDHQLREE   91 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCC--------cchHHHHHHHHHhh
Confidence            468999999999999999999741     1221   1 23445678999999999999        668887775432 2


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCeeEeeCCCcEE
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKY--RGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIll~~~~~~v~  219 (284)
                      .+.....||+++|+ .|++++.+.+...  .-+++.+++.|+.+|+.||.+||.. .  ++||||||.|||+.. .+.++
T Consensus        92 ~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~-~~~~v  169 (302)
T KOG2345|consen   92 KDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSD-SGLPV  169 (302)
T ss_pred             ccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecC-CCceE
Confidence            22567799999998 8999999887542  3489999999999999999999999 7  999999999999954 68999


Q ss_pred             EEeccchhHhhhCCC---------CCCcccCCCCccchhhhhhccc
Q psy16752        220 TLALNATELAATGHK---------LPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~---------~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      +.|||.+..+.-.-.         -......|.||.|||.++-+..
T Consensus       170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~  215 (302)
T KOG2345|consen  170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSH  215 (302)
T ss_pred             EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccC
Confidence            999998764331110         0113368999999999876543

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.91  E-value=3.4e-24  Score=191.91  Aligned_cols=175  Identities=23%  Similarity=0.338  Sum_probs=135.2

Q ss_pred             cccccccc---eeccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcc
Q psy16752         65 YHPVKIGM---LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPY  130 (284)
Q Consensus        65 ~~~~~~~~---~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~  130 (284)
                      ++++.+|.   .+.++|++.+.||+|+||.||+|.+.     .+++....      ....+.+|+.+++.+.|       
T Consensus         2 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-------   74 (353)
T cd07850           2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNH-------   74 (353)
T ss_pred             ceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCC-------
Confidence            45666665   34678999999999999999999763     34444321      12356679999999988       


Q ss_pred             cchhccccccceEec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCC
Q psy16752        131 RERVVQLLDDFKICG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPEN  208 (284)
Q Consensus       131 ~~~i~~l~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~N  208 (284)
                       ++++++++.|....  ......|+||||+.+++.+.+...    ++...+..++.|++.||.|||.. ||+||||||+|
T Consensus        75 -~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~N  148 (353)
T cd07850          75 -KNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSN  148 (353)
T ss_pred             -CCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHH
Confidence             66888887664211  133468999999998888877542    88999999999999999999999 99999999999


Q ss_pred             eeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        209 VLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       209 Ill~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+++.+ +.++|+|||++....... ......+++.|+|||++.+.
T Consensus       149 il~~~~-~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  192 (353)
T cd07850         149 IVVKSD-CTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGM  192 (353)
T ss_pred             EEECCC-CCEEEccCccceeCCCCC-CCCCCcccccccCHHHHhCC
Confidence            999554 789999999987654332 23345688999999988654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.91  E-value=4.4e-24  Score=184.81  Aligned_cols=156  Identities=28%  Similarity=0.303  Sum_probs=121.9

Q ss_pred             ecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ||+|+||+||++..+     ++++....       ....+..|+.+++.++|        ++|+++++.+.    ...++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h--------p~i~~~~~~~~----~~~~~   68 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS--------PFIVNLAYAFE----SKTHL   68 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC--------CcEEEEEEEEe----cCCeE
Confidence            799999999999763     23333211       12334568999999988        66898888776    67889


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |+||||+ +++|...+.......+++..+..++.||+.||.|||+. ||+||||||+||+++. .+.++|+|||++....
T Consensus        69 ~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~-~~~~~l~Dfg~~~~~~  146 (277)
T cd05607          69 CLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDD-QGNCRLSDLGLAVELK  146 (277)
T ss_pred             EEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcC-CCCEEEeeceeeeecC
Confidence            9999999 67777777655444589999999999999999999999 9999999999999954 4889999999987654


Q ss_pred             hCCCCCCcccCCCCccchhhhhhc
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ... ......||+.|+|||++.+.
T Consensus       147 ~~~-~~~~~~~~~~y~aPE~~~~~  169 (277)
T cd05607         147 DGK-TITQRAGTNGYMAPEILKEE  169 (277)
T ss_pred             CCc-eeeccCCCCCccCHHHHccC
Confidence            332 22345689999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.91  E-value=1.1e-23  Score=183.47  Aligned_cols=169  Identities=25%  Similarity=0.328  Sum_probs=129.7

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||+|.+.     .+++....      ....+.+|+.+++.+.+       |++++++++.+....
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~-------~~~i~~~~~~~~~~~   74 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSE-------SIYIVRLLDVEHVEE   74 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccC-------CCCccceeeeEeecC
Confidence            5999999999999999999763     23343221      22457789999999865       366888887665322


Q ss_pred             c-CCeEEEEEeccCCccHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        146 V-NGTHVCMVFEVLGHNLLKLIVKSK---YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       146 ~-~~~~~~iv~e~~~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      . .....|+||||+.+++.+.+....   ...+++..+..++.||+.||.|||.+ ||+||||+|+||+++.+.+.++++
T Consensus        75 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~~~~~kl~  153 (295)
T cd07837          75 KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQKGLLKIA  153 (295)
T ss_pred             CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecCCCeEEEe
Confidence            2 233589999999889888876543   23589999999999999999999999 999999999999997757899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.+..............+++.|+|||++.+
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  185 (295)
T cd07837         154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLG  185 (295)
T ss_pred             ecccceecCCCccccCCcccccCCCChHHhhC
Confidence            99988754333222223457888999998854

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.91  E-value=6e-24  Score=187.09  Aligned_cols=161  Identities=25%  Similarity=0.353  Sum_probs=124.7

Q ss_pred             EEecccCceeEEEecce-------eEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         82 RKLGWGHFSTVWFTGSK-------TQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-------~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      .+||+|+||+||+|..+       .+++....  ....+.+|+.+++.+.|        +|++++++.+.  ......+|
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~--~~~~~~~~   76 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKH--------PNVIALQKVFL--SHSDRKVW   76 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCC--------CCeeeEEEEEe--ccCCCeEE
Confidence            58999999999999742       23343322  23457889999999998        66888887663  12456789


Q ss_pred             EEeccCCccHHHHHHhhC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee---CCCcEEEEe
Q psy16752        153 MVFEVLGHNLLKLIVKSK-------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV---DEARVKTLA  222 (284)
Q Consensus       153 iv~e~~~~~l~~~~~~~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~---~~~~v~l~D  222 (284)
                      +||||+++++++.+....       ...+++..+..++.||+.||.|||+. ||+||||||+|||+..   +.+.++|+|
T Consensus        77 lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~kl~D  155 (317)
T cd07867          77 LLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIAD  155 (317)
T ss_pred             EEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence            999999999988875321       12478999999999999999999999 9999999999999942   346899999


Q ss_pred             ccchhHhhhCCC---CCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHK---LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++........   ......||+.|+|||++.+
T Consensus       156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07867         156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             ccceeccCCCcccccccCcceecccccCcHHhcC
Confidence            999876544322   1234578999999999865

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.91  E-value=1.1e-23  Score=183.11  Aligned_cols=163  Identities=28%  Similarity=0.387  Sum_probs=129.5

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++.+.||+|++|.||+|.++     ++++....     ....+.+|+.+++.++|        ++|+++++.+.   
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~---   73 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKH--------ANIVTLHDIIH---   73 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCC--------cceeeEEEEEe---
Confidence            46999999999999999999763     23443221     12346789999999988        66888888766   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....|+||||++++|.+.+.... ..+++..++.++.||+.||.|||+. +|+||||||+||+++.+ +.++++|||+
T Consensus        74 -~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~-~~~kl~dfg~  149 (291)
T cd07844          74 -TKKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISER-GELKLADFGL  149 (291)
T ss_pred             -cCCeEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCC-CCEEECcccc
Confidence             778999999999888888776654 3589999999999999999999999 99999999999999554 7899999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............++..|+|||++.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~  177 (291)
T cd07844         150 ARAKSVPSKTYSNEVVTLWYRPPDVLLG  177 (291)
T ss_pred             ccccCCCCccccccccccccCCcHHhhc
Confidence            8654322222223356888999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.91  E-value=9.5e-24  Score=181.14  Aligned_cols=163  Identities=20%  Similarity=0.288  Sum_probs=126.3

Q ss_pred             ccceEEEEEecccCceeEEEecc----eeEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS----KTQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .++|++.+.||+|+||.||+|.+    ..++|....   ....+.+|+.+++.+.|        ++++++++.+     .
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~--------~~i~~~~~~~-----~   71 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--------EKLVQLYAVV-----S   71 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCC--------CCcceEEEEE-----C
Confidence            35799999999999999999975    234443332   13457889999999988        6688877654     3


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....|+||||+ +++|.+++.......+++..+..++.|++.||.|||+. +++||||||+||+++. ++.++|+|||.+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~-~~~~~L~dfg~~  149 (262)
T cd05071          72 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGE-NLVCKVADFGLA  149 (262)
T ss_pred             CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcC-CCcEEeccCCce
Confidence            45579999999 66888888664444588999999999999999999999 9999999999999955 478999999988


Q ss_pred             hHhhhCCCC-CCcccCCCCccchhhhh
Q psy16752        227 ELAATGHKL-PVSFCSTAPVQEYSELS  252 (284)
Q Consensus       227 ~~~~~~~~~-~~~~~gt~~~~aPE~l~  252 (284)
                      ......... .....++..|++||++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~  176 (262)
T cd05071         150 RLIEDNEYTARQGAKFPIKWTAPEAAL  176 (262)
T ss_pred             eeccccccccccCCcccceecCHhHhc
Confidence            755433221 12344667899999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.91  E-value=1.1e-23  Score=179.50  Aligned_cols=164  Identities=24%  Similarity=0.338  Sum_probs=132.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|.+.+.||+|++|.||+|.++     ..++...      .....+.+|+.+++.++|        ++++++++.+.   
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~---   69 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS--------SYIIRYYESFL---   69 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC--------CCeehheeeec---
Confidence            3889999999999999999763     2333321      224556788999999988        66888888766   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....|+||||+ +++|.+.+.......+++..+..++.|++.||.|||.. |++|+||+|+||+++.+ +.++++|||
T Consensus        70 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~-~~~~l~df~  146 (256)
T cd08529          70 -DKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAY-DNVKIGDLG  146 (256)
T ss_pred             -cCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCC-CCEEEcccc
Confidence             678899999999 67888877665445689999999999999999999999 99999999999999654 899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++..............|++.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (256)
T cd08529         147 VAKLLSDNTNFANTIVGTPYYLSPELCEDK  176 (256)
T ss_pred             cceeccCccchhhccccCccccCHHHhcCC
Confidence            987665544444456789999999988654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.91  E-value=8.8e-24  Score=184.74  Aligned_cols=162  Identities=22%  Similarity=0.369  Sum_probs=129.6

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .+|++.+.||+|+||.||+|.+.     .+++...    .....+.+|+.+++.+.|        ++++++++.+.    
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h--------~~v~~~~~~~~----   87 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--------PNIVNYLDSYL----   87 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC--------CCEeeEEEEEE----
Confidence            47999999999999999999752     2333221    123457789999999888        66899888776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ...+.|+||||+ +++|.+.+...   .+++..+..++.|++.||.|||+. ||+||||||+||+++. ++.++|+|||+
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~~-~~~~kl~dfg~  162 (296)
T cd06654          88 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGM-DGSVKLTDFGF  162 (296)
T ss_pred             eCCEEEEeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcC-CCCEEECcccc
Confidence            567899999999 66777766433   389999999999999999999999 9999999999999954 47999999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|+|||.+.+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  191 (296)
T cd06654         163 CAQITPEQSKRSTMVGTPYWMAPEVVTRK  191 (296)
T ss_pred             chhccccccccCcccCCccccCHHHHcCC
Confidence            87655443334456789999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.91  E-value=1.3e-23  Score=183.38  Aligned_cols=162  Identities=27%  Similarity=0.393  Sum_probs=129.9

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|++.+.||.|+||.||+|.++     .+++....         ....+..|+.+++.++|        ++++++++.+.
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~   72 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH--------PNIIGLLDVFG   72 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC--------CCChhhhheee
Confidence            4889999999999999999763     23333221         12345679999999988        66999998776


Q ss_pred             EeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        143 ICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                          ....+++||||++++|.+.+.... ..+++..+..++.||+.||.|||++ ||+|+||+|+||+++. ++.++|+|
T Consensus        73 ----~~~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~-~~~~~l~d  145 (298)
T cd07841          73 ----HKSNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIAS-DGVLKLAD  145 (298)
T ss_pred             ----cCCEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcC-CCCEEEcc
Confidence                678899999999888888776543 3589999999999999999999999 9999999999999965 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++..............+++.|+|||.+.+
T Consensus       146 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (298)
T cd07841         146 FGLARSFGSPNRKMTHQVVTRWYRAPELLFG  176 (298)
T ss_pred             ceeeeeccCCCccccccccceeeeCHHHHhC
Confidence            9998766554333344567888999998743

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.91  E-value=8.5e-24  Score=180.99  Aligned_cols=164  Identities=18%  Similarity=0.284  Sum_probs=129.1

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++|+++++||+|+||.||+|...    .+++....   ..+.+.+|+.+++.++|        ++++++++.+.    ..
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~   73 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH--------DKLVRLYAVVT----KE   73 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCC--------CCeeeEEEEEc----CC
Confidence            46999999999999999999752    23333222   23567789999999988        66888887665    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...+++|||+ +++|.+.+.......+++..+..++.|++.||.|||+. +++||||||+||+++. ++.++++|||++.
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~-~~~~~l~dfg~~~  151 (261)
T cd05072          74 EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSE-SLMCKIADFGLAR  151 (261)
T ss_pred             CCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecC-CCcEEECCCccce
Confidence            7899999999 67888888765545688999999999999999999999 9999999999999954 4899999999987


Q ss_pred             HhhhCCCC-CCcccCCCCccchhhhhh
Q psy16752        228 LAATGHKL-PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~-~~~~~gt~~~~aPE~l~~  253 (284)
                      ........ .....++..|+|||.+.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  178 (261)
T cd05072         152 VIEDNEYTAREGAKFPIKWTAPEAINF  178 (261)
T ss_pred             ecCCCceeccCCCccceecCCHHHhcc
Confidence            65433211 123345677999998754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.91  E-value=3.4e-24  Score=186.69  Aligned_cols=163  Identities=25%  Similarity=0.351  Sum_probs=126.8

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+.|++++.||.|+||.||+|.+.     .+++.....    .+.+..|+.+++.+.|        ++++++++.+.   
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~---   79 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH--------PYIVKLLGAFY---   79 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC--------CcEeeeEEEEE---
Confidence            457999999999999999999763     233332222    2346678889999888        66888888776   


Q ss_pred             cCCeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+.+ ++...+.... ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.++|+|||
T Consensus        80 -~~~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~-~~~~kl~dfg  155 (292)
T cd06644          80 -WDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTL-DGDIKLADFG  155 (292)
T ss_pred             -eCCeEEEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcC-CCCEEEccCc
Confidence             56789999999955 4544444332 4589999999999999999999999 9999999999999954 5899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      .+..............+++.|+|||.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  183 (292)
T cd06644         156 VSAKNVKTLQRRDSFIGTPYWMAPEVVM  183 (292)
T ss_pred             cceeccccccccceecCCccccCceeec
Confidence            8765443333334556889999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.91  E-value=1.8e-23  Score=181.10  Aligned_cols=162  Identities=25%  Similarity=0.420  Sum_probs=130.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++...||+|+||.||+|.++     .+++...      ...+.+.+|+.+++.+.|        ++++++++.+.   
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~---   70 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH--------PNLVNLIEVFR---   70 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC--------CCEeeeeeEEe---
Confidence            6999999999999999999763     2333221      123456789999999988        66888888776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....+++||||+.++++..+.... ..+++..+..++.||+.||.|||+. |++||||||+||+++.+ +.++|+|||+
T Consensus        71 -~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~-~~~~l~dfg~  146 (286)
T cd07847          71 -RKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQ-GQIKLCDFGF  146 (286)
T ss_pred             -eCCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCC-CcEEECcccc
Confidence             677899999999877777665543 2489999999999999999999999 99999999999999655 7899999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............++..|+|||++.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~  174 (286)
T cd07847         147 ARILTGPGDDYTDYVATRWYRAPELLVG  174 (286)
T ss_pred             ceecCCCcccccCcccccccCCHHHHhC
Confidence            8766544333334567889999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.91  E-value=4.2e-24  Score=182.76  Aligned_cols=164  Identities=21%  Similarity=0.305  Sum_probs=130.9

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .+|++.+.||.|+||.||+|.++    ..+++...    ....+..|+.+++.++|        ++++++++.+.    .
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----~   73 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRH--------KHLISLFAVCS----V   73 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCC--------cchhheeeeEe----c
Confidence            46999999999999999999763    23333222    23567889999999987        66888888766    6


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....++||||+ +++|.+++.......+++..+..++.||+.||.|||+. ||+||||+|+||+++.+ +.++++|||.+
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~-~~~kl~d~g~~  151 (261)
T cd05148          74 GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED-LVCKVADFGLA  151 (261)
T ss_pred             CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCC-ceEEEccccch
Confidence            77899999999 67888888765545689999999999999999999999 99999999999999554 89999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ..............++..|++||++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~PE~~~~  178 (261)
T cd05148         152 RLIKEDVYLSSDKKIPYKWTAPEAASH  178 (261)
T ss_pred             hhcCCccccccCCCCceEecCHHHHcc
Confidence            766443333334456677999998754

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.91  E-value=1.6e-23  Score=182.39  Aligned_cols=159  Identities=25%  Similarity=0.406  Sum_probs=130.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||.||++.+.     .++++..       .....+.+|+.+++++.|        ++|+++++.+.  
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~--   71 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH--------PFLVNLYGSFQ--   71 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--------CCccceeeEEE--
Confidence            5999999999999999999763     2333322       123456789999999988        66898888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+. |++|+||+|.||+++.+ +.++|+||
T Consensus        72 --~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~-~~~kl~df  145 (290)
T cd05580          72 --DDSNLYLVMEYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSD-GYIKITDF  145 (290)
T ss_pred             --cCCeEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCC-CCEEEeeC
Confidence              778899999999 788888876653  589999999999999999999999 99999999999999554 88999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++......   ....++++.|+|||.+.+.
T Consensus       146 g~~~~~~~~---~~~~~~~~~y~aPE~~~~~  173 (290)
T cd05580         146 GFAKRVKGR---TYTLCGTPEYLAPEIILSK  173 (290)
T ss_pred             CCccccCCC---CCCCCCCccccChhhhcCC
Confidence            998765443   3455789999999988654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.91  E-value=1.2e-23  Score=185.50  Aligned_cols=162  Identities=21%  Similarity=0.251  Sum_probs=125.4

Q ss_pred             cceEEEEEecccCceeEEEecce---------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+|++.+.||+|+||.||+|.+.         .+++.....     .+.+..|+.+++.+.|        +||+++++.+
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~niv~~~g~~   78 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN--------PHVCRLLGIC   78 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEE
Confidence            46999999999999999999641         344443221     3456778999999988        6688888865


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .     ....+++++|+ +|+|.+.+.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++. .+.++|
T Consensus        79 ~-----~~~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~-~~~~kl  150 (316)
T cd05108          79 L-----TSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKT-PQHVKI  150 (316)
T ss_pred             c-----CCCceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecC-CCcEEE
Confidence            4     23467889988 778888877643 3488999999999999999999999 9999999999999954 478999


Q ss_pred             EeccchhHhhhCCCCC--CcccCCCCccchhhhhh
Q psy16752        221 LALNATELAATGHKLP--VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~--~~~~gt~~~~aPE~l~~  253 (284)
                      +|||++..........  ....++..|+|||.+.+
T Consensus       151 ~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~  185 (316)
T cd05108         151 TDFGLAKLLGADEKEYHAEGGKVPIKWMALESILH  185 (316)
T ss_pred             ccccccccccCCCcceeccCCccceeecChHHhcc
Confidence            9999998665432221  12334667999998754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2e-23  Score=178.41  Aligned_cols=164  Identities=22%  Similarity=0.295  Sum_probs=131.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++.+.||.|+||.||+|.+.     ..+++..    ...+.+.+|+.+++.++|        ++++++++.+.    
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~----   70 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH--------PNIVAYFGSYL----   70 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC--------CChhceEEEEE----
Confidence            46999999999999999999762     2333322    134567889999999988        66899888766    


Q ss_pred             CCeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|++|||+++ ++.+.+... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++. .+.++++|||.
T Consensus        71 ~~~~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~-~~~~~l~d~g~  147 (262)
T cd06613          71 RRDKLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTE-DGDVKLADFGV  147 (262)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECC-CCCEEECcccc
Confidence            67789999999955 555555443 23599999999999999999999999 9999999999999964 58899999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|+|||.+.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  176 (262)
T cd06613         148 SAQLTATIAKRKSFIGTPYWMAPEVAAVE  176 (262)
T ss_pred             chhhhhhhhccccccCCccccCchhhccc
Confidence            87665443334456789999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.91  E-value=1.6e-23  Score=181.47  Aligned_cols=163  Identities=28%  Similarity=0.423  Sum_probs=132.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++++.||.|++|.||+|.++     .+++....      ....+..|+.++++++|        ++++++++.+.   
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~---   69 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH--------PNIVKLLDVIH---   69 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC--------CCCcchhhhcc---
Confidence            3899999999999999999763     23333221      12457889999999998        66999988876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....++||||+.+++...+.......+++..+..++.|++.||.|||.. +++||||+|+||+++.+ +.++++|||+
T Consensus        70 -~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~-~~~~l~dfg~  146 (284)
T cd07860          70 -TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTE-GAIKLADFGL  146 (284)
T ss_pred             -cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCC-CCEEEeeccc
Confidence             67789999999988888888765545689999999999999999999999 99999999999999654 7999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............+++.|+|||++.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  174 (284)
T cd07860         147 ARAFGVPVRTYTHEVVTLWYRAPEILLG  174 (284)
T ss_pred             hhhcccCccccccccccccccCCeEEec
Confidence            8765544333334467888999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.91  E-value=1.1e-23  Score=180.75  Aligned_cols=165  Identities=23%  Similarity=0.357  Sum_probs=128.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||.||+|..+     .+++....       ....+.+|+.+++.++|        ++++++++.+. 
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~-   72 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH--------PNVIKYLDSFI-   72 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC--------cceeeeeeeEE-
Confidence            36999999999999999999763     23443211       12346789999999988        66888888766 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                         .....++||||+ +++|.+.+...  ....+++..+..++.||+.||.|||+. +++|+||+|+||+++.+ +.+++
T Consensus        73 ---~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~-~~~~l  147 (267)
T cd08228          73 ---EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITAT-GVVKL  147 (267)
T ss_pred             ---ECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCC-CCEEE
Confidence               567899999999 56776666432  223478999999999999999999999 99999999999999554 78999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||.+..............+++.|+|||.+.+.
T Consensus       148 ~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  181 (267)
T cd08228         148 GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN  181 (267)
T ss_pred             CccccceeccchhHHHhcCCCCccccChhhhccC
Confidence            9999887654433333355788999999988543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.90  E-value=2.1e-23  Score=177.97  Aligned_cols=164  Identities=20%  Similarity=0.242  Sum_probs=132.7

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++++.||.|+||.||.+...     ..++...      .....+.+|+.+++.++|        ++++++++.+.   
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~---   69 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH--------PNIIAYYNHFM---   69 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC--------CCeeEEEeEEe---
Confidence            5999999999999999988762     2333211      123457789999999987        66999998876   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....++++|||+ +++|.+.+.+.....+++..+..++.|++.||.|||+. |++|+||+|+||+++. .+.++++|||
T Consensus        70 -~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~-~~~~kl~d~~  146 (256)
T cd08221          70 -DDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTK-AGLIKLGDFG  146 (256)
T ss_pred             -cCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeC-CCCEEECcCc
Confidence             678899999999 67888888765444589999999999999999999999 9999999999999965 4789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++..............+++.|.|||.+.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~  176 (256)
T cd08221         147 ISKILGSEYSMAETVVGTPYYMSPELCQGV  176 (256)
T ss_pred             ceEEcccccccccccCCCccccCHhhcCCC
Confidence            987665444344456789999999987654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.90  E-value=2.9e-23  Score=177.10  Aligned_cols=165  Identities=21%  Similarity=0.285  Sum_probs=129.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .|++.+.||.|++|.||++.++     .+++...      ...+.+..|+.+++.++|        ++++.+++.+.   
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~---   69 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH--------PNIVAYRESWE---   69 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCC--------CCeeeeeeeec---
Confidence            3999999999999999999763     2333321      112356778899999988        56887776543   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      .....+|++|||+ ++++.+.+.......+++.++..++.|++.||.+||+. |++||||+|+||+++. .+.++|+|||
T Consensus        70 ~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~-~~~~~l~df~  147 (257)
T cd08223          70 GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTR-TNIIKVGDLG  147 (257)
T ss_pred             CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEec-CCcEEEeccc
Confidence            1345789999999 56777777765445689999999999999999999999 9999999999999954 5899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++..............+++.|+|||++.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  177 (257)
T cd08223         148 IARVLENQCDMASTLIGTPYYMSPELFSNK  177 (257)
T ss_pred             ceEEecccCCccccccCCcCccChhHhcCC
Confidence            987665443444466789999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.90  E-value=1.6e-23  Score=179.36  Aligned_cols=164  Identities=18%  Similarity=0.299  Sum_probs=127.7

Q ss_pred             eccceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.++|++.++||+|+||.||+|..+    .+++....   ....+.+|+.+++.+.|        ++++++++.+     
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~-----   70 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQH--------PRLVRLYAVV-----   70 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCC--------cCeeeEEEEE-----
Confidence            4467999999999999999999762    24443222   23567889999999988        5688877654     


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .....+++|||+ +++|.+.+.......+++..+..++.|++.||.|||+. |++||||||+||+++. ++.++++|||+
T Consensus        71 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~-~~~~~l~dfg~  148 (260)
T cd05067          71 TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSE-TLCCKIADFGL  148 (260)
T ss_pred             ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcC-CCCEEEccCcc
Confidence            345689999999 67888887665545689999999999999999999999 9999999999999955 48999999999


Q ss_pred             hhHhhhCCC-CCCcccCCCCccchhhhh
Q psy16752        226 TELAATGHK-LPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       226 a~~~~~~~~-~~~~~~gt~~~~aPE~l~  252 (284)
                      +........ ......++..|+|||++.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~  176 (260)
T cd05067         149 ARLIEDNEYTAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             eeecCCCCcccccCCcccccccCHHHhc
Confidence            876542221 122334567799999763

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.90  E-value=1.6e-23  Score=181.50  Aligned_cols=163  Identities=18%  Similarity=0.216  Sum_probs=125.8

Q ss_pred             ceEEEEEecccCceeEEEecc---------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGS---------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|++.+.||+|+||+||+|..         ..+++.....     ...+.+|+.+++.+.|        +|++++++.+.
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~   77 (283)
T cd05090           6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH--------PNIVCLLGVVT   77 (283)
T ss_pred             hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC--------CCeeeEEEEEe
Confidence            599999999999999999873         1233333211     1456789999999988        66888888766


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCC
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSK---------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP  206 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp  206 (284)
                          .....|+||||+ +++|.+++....               ...+++..+..++.|++.||.|||++ ||+||||||
T Consensus        78 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp  152 (283)
T cd05090          78 ----QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FFVHKDLAA  152 (283)
T ss_pred             ----cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-Ceehhcccc
Confidence                677899999999 667777775321               12378889999999999999999999 999999999


Q ss_pred             CCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        207 ENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       207 ~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|||++.+ ..++++|||++........  ......++..|+|||++.+
T Consensus       153 ~nili~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05090         153 RNILIGEQ-LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY  200 (283)
T ss_pred             ceEEEcCC-CcEEeccccccccccCCcceecccCCCccceecChHHhcc
Confidence            99999654 7899999999876543321  2234456778999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.90  E-value=6.6e-24  Score=182.64  Aligned_cols=167  Identities=23%  Similarity=0.281  Sum_probs=130.5

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC---CCChhhHHHHHHHHhhh-cCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP---QFPETALDEIKLLKCVR-DGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~---~~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.|++.+.||+|+||+||+|...     .+++...   .....+..|+.++..+. |        +|++++++.+.....
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h--------~~i~~~~~~~~~~~~   77 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--------RNIATYYGAFIKKNP   77 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCC--------CCeeeEeeEEeecCC
Confidence            56999999999999999999763     2344332   22345778999998884 5        778888887653222


Q ss_pred             --CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        147 --NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       147 --~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +++|.+.+.......+++..+..++.|++.||.|||++ +|+||||+|+||+++. .+.++|+||
T Consensus        78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~-~~~~~l~Df  155 (272)
T cd06637          78 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTE-NAEVKLVDF  155 (272)
T ss_pred             CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECC-CCCEEEccC
Confidence              135789999999 56777777654444689999999999999999999999 9999999999999954 478999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |++..............|++.|+|||++.
T Consensus       156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~  184 (272)
T cd06637         156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIA  184 (272)
T ss_pred             CCceecccccccCCcccccccccCHhHhc
Confidence            99876544333444667999999999985

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.90  E-value=1.8e-23  Score=178.64  Aligned_cols=162  Identities=17%  Similarity=0.239  Sum_probs=126.7

Q ss_pred             ceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +|++.+.||+|+||.||++..+    .+++....   ....+.+|+.+++.++|        ++++++++.+.    ...
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~~   72 (256)
T cd05114           5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSH--------PKLVQLYGVCT----QQK   72 (256)
T ss_pred             HcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCC--------CCceeEEEEEc----cCC
Confidence            5899999999999999999763    23443222   23567889999999988        66999888765    667


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|.+.+.... ..+++..+..++.|++.||.|||+. ||+||||+|+||+++. ++.++++|||.+..
T Consensus        73 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~-~~~~kl~d~g~~~~  149 (256)
T cd05114          73 PLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSS-TGVVKVSDFGMTRY  149 (256)
T ss_pred             CEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcC-CCeEEECCCCCccc
Confidence            899999999 677877776443 2489999999999999999999999 9999999999999954 47999999998875


Q ss_pred             hhhCCCCC-CcccCCCCccchhhhhh
Q psy16752        229 AATGHKLP-VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       229 ~~~~~~~~-~~~~gt~~~~aPE~l~~  253 (284)
                      ........ ....++..|+|||++.+
T Consensus       150 ~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (256)
T cd05114         150 VLDDEYTSSSGAKFPVKWSPPEVFNF  175 (256)
T ss_pred             cCCCceeccCCCCCchhhCChhhccc
Confidence            53322211 12335567999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.90  E-value=1.6e-23  Score=183.82  Aligned_cols=165  Identities=19%  Similarity=0.258  Sum_probs=125.6

Q ss_pred             cceEEEEEecccCceeEEEecc------------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS------------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQL  137 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~------------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l  137 (284)
                      ++|.+.+.||+|+||.||+|.+            ..+++.....     ...+..|+.+++.+ +|        ++++++
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h--------~~i~~~   89 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--------KNIINL   89 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC--------CCEeeE
Confidence            5799999999999999999864            1344443321     13466789999888 56        678988


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEec
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------------RGIPLENVRSIIRQILQGLNYLHTKCRIIHT  202 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~givHr  202 (284)
                      ++.+.    .....|+||||+ +++|.+++.....              ..+++..++.++.|++.||.|||+. |++||
T Consensus        90 ~~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~  164 (307)
T cd05098          90 LGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHR  164 (307)
T ss_pred             EEEEe----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-Ccccc
Confidence            88765    667899999999 6788888865421              2478899999999999999999999 99999


Q ss_pred             CCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCC--cccCCCCccchhhhhhc
Q psy16752        203 DIKPENVLLCVDEARVKTLALNATELAATGHKLPV--SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       203 DiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~--~~~gt~~~~aPE~l~~~  254 (284)
                      ||||+||+++.+ +.++|+|||.+...........  ...+++.|+|||++.+.
T Consensus       165 dlkp~Nill~~~-~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  217 (307)
T cd05098         165 DLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR  217 (307)
T ss_pred             cccHHheEEcCC-CcEEECCCcccccccccchhhccccCCCccceeChHHhccC
Confidence            999999999655 7999999999865433221111  22345679999987543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1035|consensus

Probab=99.90  E-value=7.8e-25  Score=210.40  Aligned_cols=105  Identities=26%  Similarity=0.299  Sum_probs=84.6

Q ss_pred             EEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       150 ~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      .+||-||||..++++.+.+.+...-....+.++++||++||.|+|++ |||||||||.||+++.+ ..|||.|||+|...
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~-giIHRDLKP~NIFLd~~-~~VKIGDFGLAt~~  747 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ-GIIHRDLKPRNIFLDSR-NSVKIGDFGLATDL  747 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC-ceeeccCCcceeEEcCC-CCeeecccccchhh
Confidence            48999999988888888776532113677889999999999999999 99999999999999644 89999999998862


Q ss_pred             h------------------hCCCCCCcccCCCCccchhhhhhccc
Q psy16752        230 A------------------TGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       230 ~------------------~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      .                  ++.....+.+||+-|+|||++.+..+
T Consensus       748 ~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~  792 (1351)
T KOG1035|consen  748 KENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS  792 (1351)
T ss_pred             hhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence            1                  00012235689999999999988875

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.90  E-value=2.3e-23  Score=178.67  Aligned_cols=164  Identities=20%  Similarity=0.214  Sum_probs=128.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      ..|.+.+.||+|+||.||+|.++     .+++.....   ...+.+|+.+++.+.|        ++++++++.+.    .
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~   73 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH--------PNLVQLLGVCT----R   73 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC--------CChhheEEEEc----C
Confidence            35999999999999999999763     244433222   2357789999999988        66898888765    6


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ...++++|||+ +++|.+.+.......+++..+..++.|++.||.|||.. |++||||||+||+++. .+.++++|||++
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~-~~~~kl~df~~~  151 (263)
T cd05052          74 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGE-NHLVKVADFGLS  151 (263)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcC-CCcEEeCCCccc
Confidence            77889999999 67788877665444589999999999999999999999 9999999999999954 489999999998


Q ss_pred             hHhhhCCCC-CCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHKL-PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~~-~~~~~gt~~~~aPE~l~~  253 (284)
                      ......... .....+++.|+|||.+.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  179 (263)
T cd05052         152 RLMTGDTYTAHAGAKFPIKWTAPESLAY  179 (263)
T ss_pred             cccccceeeccCCCCCccccCCHHHhcc
Confidence            765433211 112334667999998753

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.90  E-value=9.6e-24  Score=181.27  Aligned_cols=161  Identities=20%  Similarity=0.268  Sum_probs=128.1

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .+|++.+.||+|+||.||+|.+.     .++++...    ....+.+|+.+++.++|        ++++++++.+.    
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h--------~~ii~~~~~~~----   76 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH--------CNIVAYFGSYL----   76 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCC--------CCeeeeeEEEE----
Confidence            46999999999999999999752     24443322    12346779999999988        66888888766    


Q ss_pred             CCeEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||++ ++|.+.+....  .+++..+..++.|++.||.|||+. ||+||||+|+||+++. .+.++++|||+
T Consensus        77 ~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~-~~~~~l~dfg~  152 (267)
T cd06646          77 SREKLWICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTD-NGDVKLADFGV  152 (267)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECC-CCCEEECcCcc
Confidence            6778999999995 56666665433  589999999999999999999999 9999999999999954 47899999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      +..............|++.|+|||.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         153 AAKITATIAKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             ceeecccccccCccccCccccCHhHcc
Confidence            876544333334567899999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.90  E-value=1.2e-23  Score=183.91  Aligned_cols=162  Identities=22%  Similarity=0.369  Sum_probs=130.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .+|++.+.||.|+||.||+|.+.     .+++...    ...+.+.+|+.+++.++|        ++++++++.+.    
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~----   86 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN--------PNIVNYLDSYL----   86 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC--------CCEeeEEEEEe----
Confidence            47999999999999999999752     2333322    123456778999999888        66999888776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ...+.|+||||+ ++++.+.+...   .+++..+..++.|++.||.|||+. |++||||||+|||++. ++.++++|||+
T Consensus        87 ~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~-~~~~~l~Dfg~  161 (297)
T cd06656          87 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGM-DGSVKLTDFGF  161 (297)
T ss_pred             cCCEEEEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECC-CCCEEECcCcc
Confidence            677899999999 66777766543   389999999999999999999999 9999999999999954 48999999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|+|||.+.+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  190 (297)
T cd06656         162 CAQITPEQSKRSTMVGTPYWMAPEVVTRK  190 (297)
T ss_pred             ceEccCCccCcCcccCCccccCHHHHcCC
Confidence            87654443334456789999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.90  E-value=2.9e-23  Score=182.46  Aligned_cols=161  Identities=21%  Similarity=0.315  Sum_probs=128.2

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++.+.||+|+||.||++.+..     +++....     ....+.+|+.++..++|        ++|+++++.+.    
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~----   69 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNS--------PYIVGFYGAFY----   69 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEEe----
Confidence            59999999999999999997632     3333221     12346789999999988        66999998776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ...++|+||||+ +++|.+.+...  ..+++..+..++.||+.||.|||+.++++||||||+|||++.+ +.++++|||+
T Consensus        70 ~~~~~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~-~~~~l~dfg~  146 (308)
T cd06615          70 SDGEISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSR-GEIKLCDFGV  146 (308)
T ss_pred             eCCEEEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecC-CcEEEccCCC
Confidence            678999999999 56777777554  3589999999999999999999973289999999999999654 7899999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +......  ......|++.|+|||.+.+.
T Consensus       147 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~  173 (308)
T cd06615         147 SGQLIDS--MANSFVGTRSYMSPERLQGT  173 (308)
T ss_pred             ccccccc--ccccCCCCcCccChhHhcCC
Confidence            8654332  23356789999999988654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.90  E-value=2.5e-23  Score=177.24  Aligned_cols=164  Identities=22%  Similarity=0.292  Sum_probs=131.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||+|.+.     .+++....      ....+..|+.+++.++|        ++++++++.+.   
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~---   69 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH--------PNIIEYYENFL---   69 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC--------CchhheeeeEe---
Confidence            4899999999999999998762     23333211      23457789999999988        66888888766   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+++||||+ +++|.+.+.......+++..+..++.|++.||.|||++ |++|+||+|+||+++.++..++++|||
T Consensus        70 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~l~d~~  147 (256)
T cd08220          70 -EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKMVVKIGDFG  147 (256)
T ss_pred             -cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccCC
Confidence             677899999999 66788877665444589999999999999999999999 999999999999997676789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+....... ......+++.|+|||.+.+.
T Consensus       148 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  176 (256)
T cd08220         148 ISKILSSKS-KAYTVVGTPCYISPELCEGK  176 (256)
T ss_pred             CceecCCCc-cccccccCCcccCchhccCC
Confidence            987654432 22345789999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.90  E-value=8.8e-24  Score=188.20  Aligned_cols=164  Identities=20%  Similarity=0.241  Sum_probs=123.6

Q ss_pred             cceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++.+.||+|+||.||+|..          .+++|.....     ...+..|+.++.++ .|        +||+++++
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h--------~niv~~~~   78 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH--------LNVVNLLG   78 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccC--------cchhheee
Confidence            4799999999999999999863          1344432211     23466799999988 45        77999888


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhC------------------------------------------------
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK------------------------------------------------  170 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------------------------------------------  170 (284)
                      .+.   .....++++|||+ +++|.+.+....                                                
T Consensus        79 ~~~---~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (337)
T cd05054          79 ACT---KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD  155 (337)
T ss_pred             eEe---cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence            654   2456789999999 667777765321                                                


Q ss_pred             -----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCC
Q psy16752        171 -----------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHK--LPV  237 (284)
Q Consensus       171 -----------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~  237 (284)
                                 ...+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|||++........  ...
T Consensus       156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~-~~~vkL~DfG~a~~~~~~~~~~~~~  233 (337)
T cd05054         156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVRKG  233 (337)
T ss_pred             cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeC-CCcEEEeccccchhcccCcchhhcc
Confidence                       12478999999999999999999999 9999999999999965 47899999999886543322  122


Q ss_pred             cccCCCCccchhhhh
Q psy16752        238 SFCSTAPVQEYSELS  252 (284)
Q Consensus       238 ~~~gt~~~~aPE~l~  252 (284)
                      ...++..|+|||++.
T Consensus       234 ~~~~~~~y~aPE~~~  248 (337)
T cd05054         234 DARLPLKWMAPESIF  248 (337)
T ss_pred             CCCCCccccCcHHhc
Confidence            344567799999653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=2.4e-23  Score=178.30  Aligned_cols=164  Identities=20%  Similarity=0.247  Sum_probs=127.5

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++|++.+.||+|++|.||+|.+.    .+++....   ..+.+.+|+.+++.+.|        ++++++++.+.    ..
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~   73 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH--------PKLIQLYAVCT----LE   73 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCC--------CCccceeEEEe----cC
Confidence            56999999999999999998752    23333222   23567889999999988        66888887665    66


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +++|.+.+.......+++..+..++.|++.||.|||+. |++||||||+||+++.+ +.++++|||++.
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~-~~~~l~dfg~~~  151 (261)
T cd05068          74 EPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGEN-NICKVADFGLAR  151 (261)
T ss_pred             CCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCC-CCEEECCcceEE
Confidence            7789999999 78888888665444589999999999999999999999 99999999999999654 889999999987


Q ss_pred             HhhhCCCC-CCcccCCCCccchhhhhh
Q psy16752        228 LAATGHKL-PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~-~~~~~gt~~~~aPE~l~~  253 (284)
                      ........ .....++..|+|||.+.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  178 (261)
T cd05068         152 VIKEDIYEAREGAKFPIKWTAPEAALY  178 (261)
T ss_pred             EccCCcccccCCCcCceeccCcccccc
Confidence            65532111 112223457999997643

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0984|consensus

Probab=99.90  E-value=6.2e-25  Score=174.94  Aligned_cols=169  Identities=20%  Similarity=0.297  Sum_probs=130.4

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EE-----EecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QV-----LVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~-----~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++...+..||+|++|.|-+-++..     ++     .+..+.....++|+.+..+...       +|.++.+|+++.   
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~-------CPf~V~FyGa~~---  115 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVD-------CPFTVHFYGALF---  115 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCC-------CCeEEEeehhhh---
Confidence            345567789999999986655522     12     2233345556677776665443       366899999877   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVK--SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                       ....+||.||.+.-++..+..+  ..+..+++..+-+++-.++.||.|||++..|||||+||+|||++.+ +++|+|||
T Consensus       116 -regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~-GqVKiCDF  193 (282)
T KOG0984|consen  116 -REGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYD-GQVKICDF  193 (282)
T ss_pred             -ccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccC-CcEEEccc
Confidence             7788999999998877766554  2335699999999999999999999998899999999999999766 89999999


Q ss_pred             cchhHhhhCCCCCCc-ccCCCCccchhhhhhccchh
Q psy16752        224 NATELAATGHKLPVS-FCSTAPVQEYSELSRRMSKN  258 (284)
Q Consensus       224 g~a~~~~~~~~~~~~-~~gt~~~~aPE~l~~~~~~~  258 (284)
                      |.+......  ...+ ..|.-||||||.+...++.+
T Consensus       194 GIsG~L~dS--iAkt~daGCkpYmaPEri~~e~n~~  227 (282)
T KOG0984|consen  194 GISGYLVDS--IAKTMDAGCKPYMAPERINPELNQK  227 (282)
T ss_pred             ccceeehhh--hHHHHhcCCCccCChhhcCcccCcc
Confidence            998876653  2223 57999999999998887764

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.90  E-value=2.5e-23  Score=178.13  Aligned_cols=163  Identities=20%  Similarity=0.301  Sum_probs=125.6

Q ss_pred             ccceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .++|.+...||.|+||.||+|.+.    .+++....   ..+.+.+|+.+++.+.|        ++++++++.+     .
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~-----~   71 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRH--------DKLVPLYAVV-----S   71 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCC--------CCeeeEEEEE-----c
Confidence            357999999999999999999752    34443222   23467889999999988        5578777654     2


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....++||||+ +++|.+.+.......+++..+..++.|++.||.|||+. |++|+||+|+||+++. ++.++|+|||.+
T Consensus        72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~-~~~~~l~dfg~~  149 (260)
T cd05069          72 EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGD-NLVCKIADFGLA  149 (260)
T ss_pred             CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcC-CCeEEECCCccc
Confidence            45678999999 56888888665444588999999999999999999999 9999999999999954 488999999998


Q ss_pred             hHhhhCCCC-CCcccCCCCccchhhhh
Q psy16752        227 ELAATGHKL-PVSFCSTAPVQEYSELS  252 (284)
Q Consensus       227 ~~~~~~~~~-~~~~~gt~~~~aPE~l~  252 (284)
                      ......... .....++..|+|||.+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~  176 (260)
T cd05069         150 RLIEDNEYTARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             eEccCCcccccCCCccchhhCCHHHhc
Confidence            765433211 12334567799999764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.90  E-value=1.6e-23  Score=181.03  Aligned_cols=165  Identities=18%  Similarity=0.226  Sum_probs=124.4

Q ss_pred             ccceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .++|++.+.||+|+||.||+|.++          .+++.....     ...+.+|+.+++.++|        ++++++++
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~iv~~~~   76 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC--------HHVVRLLG   76 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC--------CCeeeEEE
Confidence            457999999999999999988642          233333211     1236778899998887        66888887


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCee
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL  210 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIl  210 (284)
                      .+.    .....++||||+ +++|.+++.....        ..+++..+..++.|++.||.|||+. |++||||||+||+
T Consensus        77 ~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~dlkp~Nil  151 (277)
T cd05062          77 VVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCM  151 (277)
T ss_pred             EEc----CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCcchheEE
Confidence            665    667899999999 6677777754321        1357788999999999999999999 9999999999999


Q ss_pred             EeeCCCcEEEEeccchhHhhhCCCCC--CcccCCCCccchhhhhh
Q psy16752        211 LCVDEARVKTLALNATELAATGHKLP--VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       211 l~~~~~~v~l~Dfg~a~~~~~~~~~~--~~~~gt~~~~aPE~l~~  253 (284)
                      ++. .+.++++|||++..........  ....+++.|+|||++.+
T Consensus       152 ~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05062         152 VAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  195 (277)
T ss_pred             EcC-CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc
Confidence            965 4899999999886543322111  12345778999998754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.90  E-value=6.5e-24  Score=183.94  Aligned_cols=160  Identities=23%  Similarity=0.345  Sum_probs=125.6

Q ss_pred             eEEEEEecccCceeEEEeccee-----EEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      |++.+.||+|+||.||++.+..     +++....    ....+.+|+.+++.+.|        ++++.+++.+.    ..
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h--------~~ii~~~~~~~----~~   74 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH--------PNIVKLLDAFY----YE   74 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCC--------CCeeeEEEEEe----eC
Confidence            7888999999999999997632     3333222    12356778999999988        66888888766    66


Q ss_pred             eEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...|+||||+.+ ++...+.. ....+++..+..++.|++.||.|||+. |++||||||+||+++. ++.++++|||++.
T Consensus        75 ~~~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~-~~~~kl~dfg~~~  151 (282)
T cd06643          75 NNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTL-DGDIKLADFGVSA  151 (282)
T ss_pred             CEEEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcc-CCCEEEccccccc
Confidence            789999999955 54444443 234589999999999999999999999 9999999999999954 4889999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhh
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      .............+++.|+|||++.
T Consensus       152 ~~~~~~~~~~~~~~~~~y~aPE~~~  176 (282)
T cd06643         152 KNTRTIQRRDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             cccccccccccccccccccCHhhcc
Confidence            6544333344567899999999984

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.90  E-value=2.5e-23  Score=182.86  Aligned_cols=166  Identities=27%  Similarity=0.382  Sum_probs=130.1

Q ss_pred             ceEEEEEecccCceeEEEecce-------eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-------TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-------~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|++.+.||+|+||.||+|.++       ++++....       ......+|+.+++.++|        ++++++++.+.
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~   72 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH--------ENVVSLVEVFL   72 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC--------CCccceEEEEe
Confidence            4899999999999999999863       23443322       23567889999999988        66888888765


Q ss_pred             EeccCCeEEEEEeccCCccHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee---CCC
Q psy16752        143 ICGVNGTHVCMVFEVLGHNLLKLIVKSKY---RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV---DEA  216 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~---~~~  216 (284)
                        ......+|+||||+++++.+.+.....   ..+++..+..++.||+.||.|||+. +|+||||||+||+++.   ..+
T Consensus        73 --~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~~~~~~~  149 (316)
T cd07842          73 --EHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMGEGPERG  149 (316)
T ss_pred             --CCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcCCCCccc
Confidence              112378999999999888887764321   2588999999999999999999999 9999999999999965   148


Q ss_pred             cEEEEeccchhHhhhCCC---CCCcccCCCCccchhhhhh
Q psy16752        217 RVKTLALNATELAATGHK---LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~  253 (284)
                      .++++|||++........   ......+++.|+|||++.+
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         150 VVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             eEEECCCccccccCCCcccccccCCccccccccCHHHHhC
Confidence            999999998876543322   1224568999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0596|consensus

Probab=99.90  E-value=2.3e-24  Score=192.73  Aligned_cols=168  Identities=23%  Similarity=0.282  Sum_probs=135.8

Q ss_pred             ccceEEEEEecccCceeEEEecce--e--EE-E-----ecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK--T--QV-L-----VSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~--~--~~-~-----~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +..|+++++||+||-+.||++...  .  ++ +     ........+..|+.+|.+|..       +.+|++++++-.  
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg-------~~~IIqL~DYEv--  430 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKG-------HDKIIQLYDYEV--  430 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcC-------CceEEEEeeeec--
Confidence            346999999999999999999762  1  11 1     123345668899999999987       477999998544  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ...++|+||||-..+|-+.+.+.. ..++...++.|..|++.|+.++|.+ ||||-||||.|+|+ .. |.+||+|||
T Consensus       431 --~d~~lYmvmE~Gd~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLl-Vk-G~LKLIDFG  504 (677)
T KOG0596|consen  431 --TDGYLYMVMECGDIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLL-VK-GRLKLIDFG  504 (677)
T ss_pred             --cCceEEEEeecccccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEE-Ee-eeEEeeeec
Confidence              789999999988888888776654 2344458999999999999999999 99999999999999 55 799999999


Q ss_pred             chhHhhhCCCC--CCcccCCCCccchhhhhhccch
Q psy16752        225 ATELAATGHKL--PVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       225 ~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      .|.........  ..+.+||+-||+||.+...-+.
T Consensus       505 IA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~  539 (677)
T KOG0596|consen  505 IANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSS  539 (677)
T ss_pred             hhcccCccccceeeccccCcccccCHHHHhhcccc
Confidence            99876655433  3478999999999999876655

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=3.9e-24  Score=185.03  Aligned_cols=162  Identities=22%  Similarity=0.350  Sum_probs=129.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++.+.||.|+||.||++.++     .+++....    ....+..|+.+++.++|        ++++++++.+.    
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----   72 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH--------PNIVGLYEAYF----   72 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC--------CceeEEEEEEe----
Confidence            46999999999999999999763     23443322    22356789999999988        66999998776    


Q ss_pred             CCeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||+.+ +|...+... ...+++..++.++.|++.||.|||+. +|+|+||+|+||+++. .+.++++|||+
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~-~~~~~l~d~g~  149 (280)
T cd06611          73 YENKLWILIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTL-DGDVKLADFGV  149 (280)
T ss_pred             cCCeEEEEeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECC-CCCEEEccCcc
Confidence            67789999999954 555555443 34599999999999999999999999 9999999999999954 58999999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      +..............+++.|++||++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~  176 (280)
T cd06611         150 SAKNKSTLQKRDTFIGTPYWMAPEVVA  176 (280)
T ss_pred             chhhcccccccceeecchhhcCHHHHh
Confidence            776554434444567899999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.90  E-value=1.6e-23  Score=181.41  Aligned_cols=164  Identities=18%  Similarity=0.242  Sum_probs=126.6

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|++.+.||+|+||.||+|...          .+++.....     ...+.+|+.++..+.|        ++++++++.
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h--------~~i~~~~~~   76 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH--------PNIVCLLGV   76 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC--------cccceEEEE
Confidence            36999999999999999998652          233332221     2346789999999988        668888887


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCC
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK  205 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiK  205 (284)
                      +.    .....|++|||+ +++|.+++.....              ..+++..+..++.||+.||.|||.. |++|||||
T Consensus        77 ~~----~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i~H~dlk  151 (283)
T cd05048          77 CT----KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLA  151 (283)
T ss_pred             Ec----CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-Ceeccccc
Confidence            65    667789999999 6788888865421              3478899999999999999999999 99999999


Q ss_pred             CCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        206 PENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       206 p~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      |+||+++. ++.++|+|||++........  ......+++.|+|||.+.+
T Consensus       152 p~Nil~~~-~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05048         152 ARNCLVGE-GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY  200 (283)
T ss_pred             cceEEEcC-CCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc
Confidence            99999955 47899999999875433221  1223456788999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.90  E-value=2e-23  Score=186.23  Aligned_cols=167  Identities=19%  Similarity=0.245  Sum_probs=124.6

Q ss_pred             cceEEEEEecccCceeEEEecc----------eeEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|++.+.||+|+||+||+|.+          .+++|....     ....+.+|+.++..+.+       |++++++++.
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-------h~niv~~~~~   79 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-------HLNVVNLLGA   79 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccC-------CccHhhhcce
Confidence            5799999999999999999963          124444322     12346789999999954       3779998876


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC-------------------------------------------------
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK-------------------------------------------------  170 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-------------------------------------------------  170 (284)
                      +.   .....+++||||+ +|+|.+++....                                                 
T Consensus        80 ~~---~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (343)
T cd05103          80 CT---KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEK  156 (343)
T ss_pred             ee---cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCC
Confidence            54   1445789999999 677777765421                                                 


Q ss_pred             ----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC
Q psy16752        171 ----------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHK  234 (284)
Q Consensus       171 ----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~  234 (284)
                                      ...+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++++|||++........
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~-~~~~kl~dfg~~~~~~~~~~  234 (343)
T cd05103         157 SLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPD  234 (343)
T ss_pred             ccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcC-CCcEEEEecccccccccCcc
Confidence                            01367788899999999999999999 9999999999999954 48999999999876533221


Q ss_pred             --CCCcccCCCCccchhhhhhc
Q psy16752        235 --LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       235 --~~~~~~gt~~~~aPE~l~~~  254 (284)
                        ......++..|+|||++.+.
T Consensus       235 ~~~~~~~~~~~~y~aPE~~~~~  256 (343)
T cd05103         235 YVRKGDARLPLKWMAPETIFDR  256 (343)
T ss_pred             hhhcCCCCCCcceECcHHhcCC
Confidence              12233456779999987443

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.90  E-value=1.1e-23  Score=180.32  Aligned_cols=164  Identities=21%  Similarity=0.312  Sum_probs=126.0

Q ss_pred             ccceEEEEEecccCceeEEEecce----eEEEecC---CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSP---QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .++|++.+.||+|+||.||+|...    .+++...   ...+.+.+|+.++++++|        ++++++++.+     .
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~--------~~i~~~~~~~-----~   71 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRH--------DKLVQLYAVV-----S   71 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCC--------CceEEEEeEE-----C
Confidence            457999999999999999999752    2333322   123567899999999998        5588877654     2


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....|++|||+ +++|.+.+.......+++..+..++.|++.||.|||+. +++||||||+||+++. ++.++++|||.+
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~-~~~~~l~dfg~~  149 (260)
T cd05070          72 EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGD-GLVCKIADFGLA  149 (260)
T ss_pred             CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeC-CceEEeCCceee
Confidence            34578999999 67888877655444589999999999999999999999 9999999999999955 479999999998


Q ss_pred             hHhhhCCCC-CCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHKL-PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~~-~~~~~gt~~~~aPE~l~~  253 (284)
                      ......... .....++..|+|||.+.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  177 (260)
T cd05070         150 RLIEDNEYTARQGAKFPIKWTAPEAALY  177 (260)
T ss_pred             eeccCcccccccCCCCCccccChHHHhc
Confidence            755433211 112335567999997643

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.90  E-value=2.9e-23  Score=182.03  Aligned_cols=165  Identities=21%  Similarity=0.271  Sum_probs=128.1

Q ss_pred             ccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhcccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQLL  138 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~  138 (284)
                      .++|.+.+.||+|+||.||+|.+          ..+++.....     .+.+.+|+.+++++ +|        ++|++++
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~~iv~~~  105 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH--------ENIVNLL  105 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCC--------CCcceEE
Confidence            35799999999999999999864          1233433221     23577899999999 56        6799998


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+.    .....|+||||+ +++|.+++.......+++.++..++.|++.||.|||+. +|+|+||||+|||++ +.+.
T Consensus       106 ~~~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~-~~~~  179 (302)
T cd05055         106 GACT----IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNVLLT-HGKI  179 (302)
T ss_pred             EEEe----cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceEEEc-CCCe
Confidence            8766    667799999999 67888877654433489999999999999999999999 999999999999995 4589


Q ss_pred             EEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        218 VKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++++|||++........  ......++..|+|||++.+
T Consensus       180 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  217 (302)
T cd05055         180 VKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN  217 (302)
T ss_pred             EEECCCcccccccCCCceeecCCCCcccccCCHhhhcc
Confidence            99999999875543321  1223446778999997643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0670|consensus

Probab=99.90  E-value=7.9e-24  Score=188.18  Aligned_cols=170  Identities=31%  Similarity=0.483  Sum_probs=143.2

Q ss_pred             cCCCCCCcccccccceeccceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCc
Q psy16752         58 NDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDP  129 (284)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~  129 (284)
                      ++...++|+.+.+|++++.+|.+....|+|-|++|..|.+.     ++++++..   +...-++|+.+|++|..+.....
T Consensus       414 NWdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk  493 (752)
T KOG0670|consen  414 NWDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDK  493 (752)
T ss_pred             CcccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhh
Confidence            34566899999999999999999999999999999999883     36666433   45667899999999987543332


Q ss_pred             ccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCC
Q psy16752        130 YRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSK-YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPEN  208 (284)
Q Consensus       130 ~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~N  208 (284)
                        -+++.|+-.|.    ...++|+|+|.+.-+|.+.+.+-+ .-++....++.|+.|++.||..|-.. ||+|.||||+|
T Consensus       494 --~Hclrl~r~F~----hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c-~vlHaDIKPDN  566 (752)
T KOG0670|consen  494 --FHCLRLFRHFK----HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC-GVLHADIKPDN  566 (752)
T ss_pred             --hHHHHHHHHhh----hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc-CeeecccCccc
Confidence              34778888887    889999999999999999988743 23488999999999999999999886 99999999999


Q ss_pred             eeEeeCCCcEEEEeccchhHhhhCCC
Q psy16752        209 VLLCVDEARVKTLALNATELAATGHK  234 (284)
Q Consensus       209 Ill~~~~~~v~l~Dfg~a~~~~~~~~  234 (284)
                      |||+.....++|||||.|..+..+..
T Consensus       567 iLVNE~k~iLKLCDfGSA~~~~enei  592 (752)
T KOG0670|consen  567 ILVNESKNILKLCDFGSASFASENEI  592 (752)
T ss_pred             eEeccCcceeeeccCccccccccccc
Confidence            99988888999999999987776543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=9e-24  Score=187.84  Aligned_cols=157  Identities=23%  Similarity=0.151  Sum_probs=113.3

Q ss_pred             ceeccceEEEEEecccCceeEEEeccee------EEEecCCC---------ChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSKT------QVLVSPQF---------PETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~------~~~~~~~~---------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      ..+.++|.+.+.||+|+||+||+|.++.      +++.....         ...+.+|+.+|+.+.|        ++++.
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h--------~~iv~   85 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRG--------IGVVP   85 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccC--------CCCCc
Confidence            4456789999999999999999997531      34432211         2347899999999998        44553


Q ss_pred             -ccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCC-CCCCeeEeeC
Q psy16752        137 -LLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI-KPENVLLCVD  214 (284)
Q Consensus       137 -l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDi-Kp~NIll~~~  214 (284)
                       ++.        ....|+||||+.|..+..+  ..   ..   ...++.|++.+|.|||++ ||+|||| ||+|||++. 
T Consensus        86 ~l~~--------~~~~~LVmE~~~G~~L~~~--~~---~~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~NILv~~-  147 (365)
T PRK09188         86 QLLA--------TGKDGLVRGWTEGVPLHLA--RP---HG---DPAWFRSAHRALRDLHRA-GITHNDLAKPQNWLMGP-  147 (365)
T ss_pred             EEEE--------cCCcEEEEEccCCCCHHHh--Cc---cc---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcceEEEcC-
Confidence             332        1247999999955444322  11   11   146789999999999999 9999999 999999954 


Q ss_pred             CCcEEEEeccchhHhhhCCCC--------CCcccCCCCccchhhhhhc
Q psy16752        215 EARVKTLALNATELAATGHKL--------PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~--------~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++.++|+|||+|.........        ..+..+++.|+|||.+..+
T Consensus       148 ~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        148 DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            478999999998865443211        1245688889999988643

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=1.9e-23  Score=182.27  Aligned_cols=164  Identities=18%  Similarity=0.318  Sum_probs=125.7

Q ss_pred             cceEEEEEecccCceeEEEecce-------------------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-------------------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYR  131 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-------------------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~  131 (284)
                      ++|++.+.||+|+||.||+|...                   .+++.....     ...+.+|+.+++.++|        
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h--------   76 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN--------   76 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC--------
Confidence            47999999999999999998652                   234433221     2346789999999998        


Q ss_pred             chhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCC----------CCCCHHHHHHHHHHHHHHHHHHhhCCCcE
Q psy16752        132 ERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY----------RGIPLENVRSIIRQILQGLNYLHTKCRII  200 (284)
Q Consensus       132 ~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~~giv  200 (284)
                      ++++++++.+.    .....++||||+ +++|.+.+.....          ..+++..+..++.|++.||.|||+. |++
T Consensus        77 ~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~  151 (295)
T cd05097          77 PNIIRLLGVCV----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL-NFV  151 (295)
T ss_pred             CCcCeEEEEEc----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc-Cee
Confidence            66888888765    677899999999 6677777754310          1367889999999999999999999 999


Q ss_pred             ecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        201 HTDIKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       201 HrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||||||+||+++. ++.++++|||++........  ......++..|+|||++.+
T Consensus       152 H~dlkp~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  205 (295)
T cd05097         152 HRDLATRNCLVGN-HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL  205 (295)
T ss_pred             ccccChhhEEEcC-CCcEEecccccccccccCcceeccCcCcCceeecChhhhcc
Confidence            9999999999954 47899999999875433221  1223345678999997643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.90  E-value=5.1e-23  Score=178.24  Aligned_cols=163  Identities=23%  Similarity=0.352  Sum_probs=131.1

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++.+.||.|++|.||+|.+.     .+++....     ....+.+|+.+++.++|        +|++++++.+.    
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~----   68 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH--------ENIVRLHDVIH----   68 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC--------CCEeeeeeeEe----
Confidence            4899999999999999999873     23443221     23456789999999988        66899888776    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSK-YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .....++||||+.+++.+.+.... ...+++..+..++.||+.||.|||+. |++||||+|+||+++ +++.++++|||.
T Consensus        69 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~-~~~~~~l~d~g~  146 (284)
T cd07836          69 TENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLIN-KRGELKLADFGL  146 (284)
T ss_pred             eCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEC-CCCcEEEeecch
Confidence            667899999999888888876543 23589999999999999999999999 999999999999995 458999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............+++.|++||++.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~  174 (284)
T cd07836         147 ARAFGIPVNTFSNEVVTLWYRAPDVLLG  174 (284)
T ss_pred             hhhhcCCccccccccccccccChHHhcC
Confidence            8765443333334567889999998855

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.90  E-value=4.1e-23  Score=178.73  Aligned_cols=163  Identities=22%  Similarity=0.276  Sum_probs=124.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHH-HHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKL-LKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~-l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||+|.++     ++++.....     ...+..|+.+ ++.+.|        ++++++++.+.   
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~--------~~iv~~~~~~~---   70 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDC--------PYTVTFYGALF---   70 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCC--------CCeeeeeEEEe---
Confidence            5999999999999999999763     344433221     1234556554 333444        77999988776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                       ....+|++|||+.++|.+++...  ....+++..+..++.||+.||.|||++++++||||||+||+++.+ +.++|+||
T Consensus        71 -~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~-~~~kl~df  148 (283)
T cd06617          71 -REGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRN-GQVKLCDF  148 (283)
T ss_pred             -cCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCC-CCEEEeec
Confidence             67789999999998887777653  223589999999999999999999985489999999999999554 89999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |++....... ......++.+|+|||++.+
T Consensus       149 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  177 (283)
T cd06617         149 GISGYLVDSV-AKTIDAGCKPYMAPERINP  177 (283)
T ss_pred             cccccccccc-ccccccCCccccChhhcCC
Confidence            9987654321 1223568899999998865

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.90  E-value=3.9e-23  Score=179.16  Aligned_cols=163  Identities=25%  Similarity=0.290  Sum_probs=122.7

Q ss_pred             cce-EEEEEecccCceeEEEecc---------eeEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRY-RVTRKLGWGHFSTVWFTGS---------KTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y-~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++| ++++.||+|+||+||++..         ..++|....     ....+.+|+.+++.++|        ++++++++.
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~   74 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYH--------ENIVKYKGC   74 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCC--------CCEeeEEEE
Confidence            456 9999999999999987642         124444332     23456789999999988        668888876


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.  ......+++||||+ +++|.+.+...   .+++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.++
T Consensus        75 ~~--~~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~~~-~~~~  147 (283)
T cd05080          75 CS--EQGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDND-RLVK  147 (283)
T ss_pred             Ee--cCCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEcCC-CcEE
Confidence            53  12345789999999 56777776543   399999999999999999999999 99999999999999554 8999


Q ss_pred             EEeccchhHhhhCCCC---CCcccCCCCccchhhhhh
Q psy16752        220 TLALNATELAATGHKL---PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~---~~~~~gt~~~~aPE~l~~  253 (284)
                      ++|||++.........   .....++..|+|||.+.+
T Consensus       148 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~  184 (283)
T cd05080         148 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE  184 (283)
T ss_pred             EeecccccccCCcchhhccCCCCCCCceeeCHhHhcc
Confidence            9999998765432211   112345666899998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.90  E-value=2.8e-23  Score=178.57  Aligned_cols=163  Identities=14%  Similarity=0.183  Sum_probs=125.9

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++.+.||+|+||.||+|.++        .+++.....     ...+..|+.+++.+.|        +|++++++.+.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~   75 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH--------PNIIHLEGVVT   75 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC--------CCcceEEEEEe
Confidence            46999999999999999998752        234433221     2356789999999988        66888888765


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          .....|+||||+ +++|.+.+.... ..+++..+..++.|++.||.|||+. +++||||||+|||++. ++.++++
T Consensus        76 ----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~-~~~~~l~  148 (267)
T cd05066          76 ----KSKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNS-NLVCKVS  148 (267)
T ss_pred             ----cCCccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECC-CCeEEeC
Confidence                667899999999 567777776543 3589999999999999999999999 9999999999999954 4799999


Q ss_pred             eccchhHhhhCCCCCC---cccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPV---SFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~---~~~gt~~~~aPE~l~~  253 (284)
                      |||.+...........   ...++..|++||.+.+
T Consensus       149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~  183 (267)
T cd05066         149 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY  183 (267)
T ss_pred             CCCcccccccccceeeecCCCccceeecCHhHhcc
Confidence            9999876543322111   1223567999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=3.9e-23  Score=178.28  Aligned_cols=165  Identities=19%  Similarity=0.230  Sum_probs=127.4

Q ss_pred             ccceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .++|++.+.||+|+||.||+|.++          .+++.....     ...+.+|+.+++.+.|        ++++++++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~   76 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC--------HHVVRLLG   76 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC--------CceeEEEE
Confidence            357999999999999999998753          233433222     1246778899988887        66999998


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCee
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL  210 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIl  210 (284)
                      .+.    .....++||||+ +++|.+.+....        ...+++..+..++.||+.||.|||+. +|+||||||+||+
T Consensus        77 ~~~----~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di~p~nil  151 (277)
T cd05032          77 VVS----TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDLAARNCM  151 (277)
T ss_pred             EEc----CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccChheEE
Confidence            776    667899999999 678888776532        12367889999999999999999999 9999999999999


Q ss_pred             EeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        211 LCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       211 l~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++.+ +.++++|||++........  ......++..|+|||.+.+
T Consensus       152 l~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05032         152 VAED-LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (277)
T ss_pred             EcCC-CCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc
Confidence            9654 8999999999875543321  1223456788999998743

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.90  E-value=4.8e-23  Score=178.67  Aligned_cols=168  Identities=20%  Similarity=0.293  Sum_probs=128.6

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhhh-cCCCCCcccchhccccccceEec
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCVR-DGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .++|++.+.||+|+||.||+|.+.     .++++...   ....+..|+.+++.+. |        +|++++++.+....
T Consensus        17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h--------~~i~~~~~~~~~~~   88 (286)
T cd06638          17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH--------PNVVKFYGMYYKKD   88 (286)
T ss_pred             ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcC--------CCeeeeeeeeeecc
Confidence            357999999999999999998762     24443322   1245677999999884 6        67888888653221


Q ss_pred             -cCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        146 -VNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       146 -~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                       .....+++||||+ +++|.+.+...  ....+++..+..++.|++.||.|||+. +++||||||+||+++.+ +.++++
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~-~~~kl~  166 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTE-GGVKLV  166 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCC-CCEEEc
Confidence             2456899999999 66776665432  223588999999999999999999999 99999999999999654 789999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |||++..............|++.|+|||++.
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (286)
T cd06638         167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIA  197 (286)
T ss_pred             cCCceeecccCCCccccccCCCcccChhhhc
Confidence            9999876544333334557999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.90  E-value=4.1e-23  Score=177.33  Aligned_cols=163  Identities=13%  Similarity=0.170  Sum_probs=126.8

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++.+.||+|+||+||+|.++        .+++.....     ...+.+|+.+++.++|        ++++++++.+.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~   75 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH--------PNIIRLEGVVT   75 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC--------CCcceEeEEEe
Confidence            46999999999999999998752        234433221     2346779999999988        66888888765


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          .....++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+. +|+|+||||+||+++. .+.++++
T Consensus        76 ----~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~-~~~~~l~  148 (266)
T cd05033          76 ----KSRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNS-NLVCKVS  148 (266)
T ss_pred             ----cCCceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcC-CCCEEEC
Confidence                677899999999 667777776543 3589999999999999999999999 9999999999999955 4889999


Q ss_pred             eccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++.........  .....+++.|+|||.+.+
T Consensus       149 dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~  182 (266)
T cd05033         149 DFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY  182 (266)
T ss_pred             ccchhhcccccccceeccCCCCCccccChhhhcc
Confidence            99998876522111  112345677999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.90  E-value=5e-23  Score=176.47  Aligned_cols=165  Identities=24%  Similarity=0.365  Sum_probs=131.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||.||+|...     .+++...       .....+.+|+.+++.+.|        ++++.+++.+. 
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~--------~~i~~~~~~~~-   72 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH--------PNVIKYLASFI-   72 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC--------CCeeeeeeeee-
Confidence            46999999999999999999774     2333221       124567889999999988        66888888776 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                         .....++||||+ +++|...+...  ....+++..+..++.|++.||.|||+. ||+||||+|+||+++. ++.+++
T Consensus        73 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~-~~~~~l  147 (267)
T cd08224          73 ---ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITA-TGVVKL  147 (267)
T ss_pred             ---cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECC-CCcEEE
Confidence               667899999999 66887777542  223489999999999999999999999 9999999999999965 478999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++..............+++.|+|||.+.+.
T Consensus       148 ~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~  181 (267)
T cd08224         148 GDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN  181 (267)
T ss_pred             eccceeeeccCCCcccceecCCccccCHHHhccC
Confidence            9999987655443334456789999999987543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=6.8e-23  Score=180.47  Aligned_cols=164  Identities=22%  Similarity=0.329  Sum_probs=129.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||.||+|.+.     .+++....       ....+..|+.+++.+.|        ++|+++++.+.  
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~--   71 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH--------PFLPTLYASFQ--   71 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC--------CCchhheeeee--
Confidence            5999999999999999999763     23443221       22346789999999987        66888888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        .....|+||||+ +++|.+.+.......+++..+..++.|++.||.|||.. |++|+||||+||+++.+ +.++|.||
T Consensus        72 --~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~-~~~~l~df  147 (316)
T cd05574          72 --TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHES-GHIMLSDF  147 (316)
T ss_pred             --cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCC-CCEEEeec
Confidence              678899999999 67888877665445689999999999999999999999 99999999999999654 89999999


Q ss_pred             cchhHhhhCCC-----------------------------CCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHK-----------------------------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~-----------------------------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++........                             ....+.||..|+|||++.+.
T Consensus       148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  207 (316)
T cd05574         148 DLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD  207 (316)
T ss_pred             chhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC
Confidence            98775432211                             11134688999999998643

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.90  E-value=4.1e-23  Score=178.86  Aligned_cols=162  Identities=27%  Similarity=0.447  Sum_probs=131.2

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||.|+||.||+|.+.     .+++...      .....+.+|+.+++.+.|        ++++++++.+.   
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~---   69 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH--------PYVVKLLDVFP---   69 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC--------CCCcceeeEEe---
Confidence            4899999999999999999763     2333321      223567889999999987        66888888776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....+++||||++++|.+.+.... ..+++..+..++.||+.||.|||+. |++|+||+|+||+++. .+.++++|||.
T Consensus        70 -~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~-~~~~~l~dfg~  145 (286)
T cd07832          70 -HGSGFVLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISA-DGVLKIADFGL  145 (286)
T ss_pred             -cCCeeEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcC-CCcEEEeeeee
Confidence             678899999999888888876544 4589999999999999999999999 9999999999999965 58899999999


Q ss_pred             hhHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      +........ ......|+..|+|||++.+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  174 (286)
T cd07832         146 ARLFSEEEPRLYSHQVATRWYRAPELLYG  174 (286)
T ss_pred             cccccCCCCCccccccCcccccCceeeec
Confidence            876654332 1234568999999998753

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.90  E-value=2.1e-23  Score=182.94  Aligned_cols=163  Identities=17%  Similarity=0.223  Sum_probs=122.1

Q ss_pred             cceEEEEEecccCceeEEEeccee-------EEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-------QVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-------~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++.+.||+|+||.||+|.++.       +++.....     ...+.+|+.++.++ .|        ++++++++.+.
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h--------~~iv~~~~~~~   78 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--------PNIINLLGACE   78 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCC--------CCcceEEEEEC
Confidence            369999999999999999997521       22222211     13466799999998 55        67999888766


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                          ....+|+||||+ +++|.+++....              ...+++..++.++.||+.||.|||+. ||+||||||+
T Consensus        79 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dlkp~  153 (303)
T cd05088          79 ----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAAR  153 (303)
T ss_pred             ----CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-Cccccccchh
Confidence                677899999999 678888776432              12478999999999999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++.+ +.++|+|||++....... ......++..|+|||.+.+
T Consensus       154 Nili~~~-~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  197 (303)
T cd05088         154 NILVGEN-YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNY  197 (303)
T ss_pred             eEEecCC-CcEEeCccccCcccchhh-hcccCCCcccccCHHHHhc
Confidence            9999554 799999999875322110 1111223556888887644

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0695|consensus

Probab=99.90  E-value=8.8e-24  Score=179.40  Aligned_cols=164  Identities=21%  Similarity=0.314  Sum_probs=132.5

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .+|.++.+||+|+|+.|.+++.+.     ++++.++.       ..-.+.|-.+......       +|.++.+...|. 
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn-------~pflvglhscfq-  321 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-------NPFLVGLHSCFQ-  321 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccC-------CCeEEehhhhhc-
Confidence            469999999999999999887743     33332211       1113445555544332       356788887776 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +...+++|.||. +|+|.-.+.+++  .++++.++.+..+|+.||.|||++ |||.||||.+|+|++.. +++++.|
T Consensus       322 ---tesrlffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldae-ghikltd  394 (593)
T KOG0695|consen  322 ---TESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAE-GHIKLTD  394 (593)
T ss_pred             ---ccceEEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccC-Cceeecc
Confidence               899999999999 777776666554  499999999999999999999999 99999999999999555 9999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|.++....+...++++||||.|+|||+|.+.
T Consensus       395 ygmcke~l~~gd~tstfcgtpnyiapeilrge  426 (593)
T KOG0695|consen  395 YGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE  426 (593)
T ss_pred             cchhhcCCCCCcccccccCCCcccchhhhccc
Confidence            99999888888899999999999999999764

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.90  E-value=2.1e-23  Score=180.69  Aligned_cols=157  Identities=20%  Similarity=0.316  Sum_probs=124.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++++.||+|+||.||+|.+.     .+++.....     ...+.+|+.+++.+.|        ++++++++.+.    
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~----   69 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS--------PYIIGFYGAFF----   69 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC--------CCeeeEEEEEE----
Confidence            5889999999999999999762     244443221     2456789999999988        66999998877    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      .....++||||+.++.+...     ..+++..+..++.|++.||.|||+. ||+|+||||+|||++.+ +.++++|||++
T Consensus        70 ~~~~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~-~~~~l~dfg~~  142 (279)
T cd06619          70 VENRISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTR-GQVKLCDFGVS  142 (279)
T ss_pred             ECCEEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCC-CCEEEeeCCcc
Confidence            67788999999955544433     1378899999999999999999999 99999999999999654 89999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ......  .....+||+.|+|||++.+.
T Consensus       143 ~~~~~~--~~~~~~~~~~y~aPE~~~~~  168 (279)
T cd06619         143 TQLVNS--IAKTYVGTNAYMAPERISGE  168 (279)
T ss_pred             eecccc--cccCCCCChhhcCceeecCC
Confidence            754332  23356799999999987543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.90  E-value=3.8e-23  Score=177.41  Aligned_cols=162  Identities=22%  Similarity=0.315  Sum_probs=128.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC----------CChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      +|+..+.||+|+||.||++.+.     .++++...          ....+.+|+.++++++|        ++++++++.+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~   72 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNH--------PHIIRMLGAT   72 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCC--------Cceehhhcee
Confidence            3788899999999999998752     24444322          12457789999999988        6699999887


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    ....+++||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ |++|+||+|+||+++.++..++|
T Consensus        73 ~----~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~~~~~~l  145 (268)
T cd06630          73 C----EDSHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRI  145 (268)
T ss_pred             c----cCCeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEE
Confidence            6    777899999999 567777665433  589999999999999999999999 99999999999999766567999


Q ss_pred             EeccchhHhhhCCC----CCCcccCCCCccchhhhhh
Q psy16752        221 LALNATELAATGHK----LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|||.+........    ......++..|+|||.+.+
T Consensus       146 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~  182 (268)
T cd06630         146 ADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG  182 (268)
T ss_pred             cccccccccccccccCCccccccccccceeCHhHhcc
Confidence            99999876554321    1224568899999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.90  E-value=4.5e-23  Score=180.30  Aligned_cols=162  Identities=24%  Similarity=0.384  Sum_probs=129.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .+|++.+.||.|+||.||+|.+.     .+++...    .....+.+|+.+++.++|        ++++.+++.+.    
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~----   86 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKN--------PNIVNFLDSFL----   86 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCC--------CceeeeeeeEe----
Confidence            36999999999999999998752     2333221    123456789999999988        66888888776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+|+||+ +++|...+...   .+++..+..++.|++.||.|||+. |++||||+|+||+++. ++.++|+|||+
T Consensus        87 ~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~-~~~~kl~dfg~  161 (296)
T cd06655          87 VGDELFVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGM-DGSVKLTDFGF  161 (296)
T ss_pred             cCceEEEEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECC-CCCEEEccCcc
Confidence            677899999999 56666655433   489999999999999999999999 9999999999999954 58999999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|+|||.+.+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  190 (296)
T cd06655         162 CAQITPEQSKRSTMVGTPYWMAPEVVTRK  190 (296)
T ss_pred             chhcccccccCCCcCCCccccCcchhcCC
Confidence            87655443334456789999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0194|consensus

Probab=99.90  E-value=1.1e-23  Score=190.49  Aligned_cols=165  Identities=20%  Similarity=0.236  Sum_probs=126.6

Q ss_pred             ccceEEEEEecccCceeEEEeccee---------EEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT---------QVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~---------~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      ..+-.+.++||+|+||.||+|..+.         +++....       ....+++|.++|+.++|        +||+.+|
T Consensus       156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H--------~NVVr~y  227 (474)
T KOG0194|consen  156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH--------PNVVRFY  227 (474)
T ss_pred             ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC--------CCEEEEE
Confidence            3445667899999999999997643         2222221       23567899999999999        7799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +...    ....++||||++ +|+|.+++.+... .++..+...++.+.+.||+|||++ ++|||||-.+|+|++.+ ..
T Consensus       228 GVa~----~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k-~~IHRDIAARNcL~~~~-~~  300 (474)
T KOG0194|consen  228 GVAV----LEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK-NCIHRDIAARNCLYSKK-GV  300 (474)
T ss_pred             EEEc----CCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC-CCcchhHhHHHheecCC-Ce
Confidence            9665    788899999999 7788888887654 599999999999999999999999 99999999999999554 67


Q ss_pred             EEEEeccchhHhhhCCCCCCcc-cCCCCccchhhhhhcc
Q psy16752        218 VKTLALNATELAATGHKLPVSF-CSTAPVQEYSELSRRM  255 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~-~gt~~~~aPE~l~~~~  255 (284)
                      +||+|||++.....- ...... ---..|.|||++....
T Consensus       301 vKISDFGLs~~~~~~-~~~~~~~klPirWLAPEtl~~~~  338 (474)
T KOG0194|consen  301 VKISDFGLSRAGSQY-VMKKFLKKLPIRWLAPETLNTGI  338 (474)
T ss_pred             EEeCccccccCCcce-eeccccccCcceecChhhhccCc
Confidence            899999997644311 111111 1234577788775543

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.90  E-value=3.9e-23  Score=181.15  Aligned_cols=165  Identities=16%  Similarity=0.240  Sum_probs=126.4

Q ss_pred             ccceEEEEEecccCceeEEEecc------------eeEEEecCC-----CChhhHHHHHHHHhh-hcCCCCCcccchhcc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS------------KTQVLVSPQ-----FPETALDEIKLLKCV-RDGDVNDPYRERVVQ  136 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~------------~~~~~~~~~-----~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~  136 (284)
                      ..+|.+.+.||+|+||.||+|..            ..+++....     ....+.+|+.+++.+ .|        ++|++
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~~i~~   85 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--------KNIIN   85 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccC--------CCchh
Confidence            35799999999999999999863            123343322     124577899999988 56        67999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEe
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIH  201 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givH  201 (284)
                      +++.+.    .....|+||||+ +++|.+++....              ...+++..+..++.||+.||.|||+. ||+|
T Consensus        86 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-givH  160 (304)
T cd05101          86 LLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIH  160 (304)
T ss_pred             eeEEEe----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC-Ceee
Confidence            888776    667899999999 668877776532              12477888999999999999999999 9999


Q ss_pred             cCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        202 TDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       202 rDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      |||||+||+++. ++.++++|||++.........  .....+++.|+|||++.+
T Consensus       161 ~dlkp~Nili~~-~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (304)
T cd05101         161 RDLAARNVLVTE-NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD  213 (304)
T ss_pred             cccccceEEEcC-CCcEEECCCccceecccccccccccCCCCCceeeCchhhcc
Confidence            999999999954 489999999998755432221  122345678999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.90  E-value=2.5e-23  Score=181.29  Aligned_cols=164  Identities=19%  Similarity=0.301  Sum_probs=127.8

Q ss_pred             cceEEEEEecccCceeEEEecce---------------------eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------------------TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDP  129 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------------------~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~  129 (284)
                      ++|++.+.||+|+||.||+|.+.                     .+++....     ..+.+.+|+.+++.++|      
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~------   78 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD------   78 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC------
Confidence            47999999999999999998652                     23333222     12456779999999988      


Q ss_pred             ccchhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCc
Q psy16752        130 YRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK---------YRGIPLENVRSIIRQILQGLNYLHTKCRI  199 (284)
Q Consensus       130 ~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~gi  199 (284)
                        ++++++++.+.    .....+++||++ +++|.+++....         ...+++..+..++.|++.||.|||+. ||
T Consensus        79 --~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~-~i  151 (296)
T cd05051          79 --PNIARLLGVCT----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL-NF  151 (296)
T ss_pred             --CCEeEEEEEEe----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc-Cc
Confidence              66888888765    567899999999 667777776543         12489999999999999999999999 99


Q ss_pred             EecCCCCCCeeEeeCCCcEEEEeccchhHhhhCC--CCCCcccCCCCccchhhhhh
Q psy16752        200 IHTDIKPENVLLCVDEARVKTLALNATELAATGH--KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       200 vHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +||||||+||+++.+ +.++++|||++.......  .......+++.|+|||.+.+
T Consensus       152 ~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (296)
T cd05051         152 VHRDLATRNCLVGKN-YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL  206 (296)
T ss_pred             cccccchhceeecCC-CceEEccccceeecccCcceeecCcCCCCceecCHHHhhc
Confidence            999999999999555 899999999987543322  12234456788999998754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.90  E-value=4.8e-23  Score=179.90  Aligned_cols=164  Identities=19%  Similarity=0.305  Sum_probs=124.3

Q ss_pred             ccceEEEEEecccCceeEEEecce---------------------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---------------------TQVLVSPQF-----PETALDEIKLLKCVRDGDVND  128 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---------------------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~  128 (284)
                      .++|++.+.||+|+||.||+|.+.                     .+++.....     ...+.+|+.+++.++|     
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~-----   78 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD-----   78 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----
Confidence            357999999999999999998531                     233333221     2457789999999988     


Q ss_pred             cccchhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhhCCC
Q psy16752        129 PYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY---------RGIPLENVRSIIRQILQGLNYLHTKCR  198 (284)
Q Consensus       129 ~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~g  198 (284)
                         ++++++++.+.    .....|+||||+ +++|.+++.....         ..+++..+..++.||+.||.|||+. |
T Consensus        79 ---~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~  150 (296)
T cd05095          79 ---PNIIRLLAVCI----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL-N  150 (296)
T ss_pred             ---CCcceEEEEEe----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC-C
Confidence               66888888766    667799999999 6788777765321         1367788999999999999999999 9


Q ss_pred             cEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhh
Q psy16752        199 IIHTDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELS  252 (284)
Q Consensus       199 ivHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~  252 (284)
                      ++||||||+|||++. ++.++++|||++.........  .....++..|++||+..
T Consensus       151 i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  205 (296)
T cd05095         151 FVHRDLATRNCLVGK-NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL  205 (296)
T ss_pred             eecccCChheEEEcC-CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHh
Confidence            999999999999954 589999999998754332211  12233456789998643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.90  E-value=6.2e-24  Score=182.46  Aligned_cols=161  Identities=20%  Similarity=0.288  Sum_probs=127.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++.+.||+|+||.||+|.+.     +++++...    ....+.+|+.+++.++|        ++++++++.+.    
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h--------~~ii~~~~~~~----   76 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH--------SNIVAYFGSYL----   76 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC--------CCeeeEEEEEE----
Confidence            46999999999999999999762     24443221    12346678999999988        66899888766    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||+ +++|.+.+....  .+++..+..++.|++.||.|||+. |++|+||||+||+++. .+.++++|||+
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~-~~~~~l~dfg~  152 (267)
T cd06645          77 RRDKLWICMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTD-NGHVKLADFGV  152 (267)
T ss_pred             eCCEEEEEEeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECC-CCCEEECccee
Confidence            678899999999 557776665443  589999999999999999999999 9999999999999954 47899999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      +..............|++.|+|||++.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  179 (267)
T cd06645         153 SAQITATIAKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             eeEccCcccccccccCcccccChhhhc
Confidence            875544333334567999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.90  E-value=4.9e-23  Score=178.50  Aligned_cols=162  Identities=27%  Similarity=0.412  Sum_probs=129.9

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||+|.++     .+++....      ..+.+.+|+.+++.++|        ++++++++.+.   
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~---   70 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH--------ENLVNLIEVFR---   70 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC--------cchhhHHHhcc---
Confidence            5999999999999999999873     23443211      23456789999999988        66888888876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....|+||||+.++++..+.... ..+++..+..++.||+.||.|||+. |++|+||+|+||+++. ++.++++|||+
T Consensus        71 -~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~-~~~~~l~dfg~  146 (286)
T cd07846          71 -RKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQ-SGVVKLCDFGF  146 (286)
T ss_pred             -cCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECC-CCcEEEEeeee
Confidence             778899999999777766665543 2489999999999999999999999 9999999999999955 48999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............++..|+|||++.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  174 (286)
T cd07846         147 ARTLAAPGEVYTDYVATRWYRAPELLVG  174 (286)
T ss_pred             eeeccCCccccCcccceeeccCcHHhcc
Confidence            8765544333334568889999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=4.2e-23  Score=176.58  Aligned_cols=165  Identities=21%  Similarity=0.323  Sum_probs=129.0

Q ss_pred             ccceEEEEEecccCceeEEEecce----eEEEecC---CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSP---QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .++|.+.+.||.|+||.||+|...    .+++...   .....+.+|+.+++.+.|        ++++++++.+.    .
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~   72 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH--------DKLVQLYAVCS----E   72 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCC--------CCEeeeeeeee----c
Confidence            457999999999999999998753    2343322   223567889999999988        66888888765    6


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....++||||+ +++|.+.+.......+++..+..++.|++.||.|||.. +++|+||+|+||+++.+ +.++++|||.+
T Consensus        73 ~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~-~~~~l~d~g~~  150 (261)
T cd05034          73 EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN-LVCKIADFGLA  150 (261)
T ss_pred             CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCC-CCEEECccccc
Confidence            67799999999 67888888765444689999999999999999999999 99999999999999655 89999999987


Q ss_pred             hHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      ........ ......++..|+|||.+.+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~  178 (261)
T cd05034         151 RLIEDDEYTAREGAKFPIKWTAPEAANY  178 (261)
T ss_pred             eeccchhhhhhhccCCCccccCHHHhcc
Confidence            65442211 1112335678999997754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=3e-23  Score=178.33  Aligned_cols=168  Identities=21%  Similarity=0.316  Sum_probs=131.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEec-
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICG-  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~-  145 (284)
                      ++|++.+.||+|+||.||+|.++     ..+++...   ....+.+|+.+++++ .|        ++++++++.+.... 
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h--------~~i~~~~~~~~~~~~   77 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH--------PNIATFYGAFIKKNP   77 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCC--------CChheEEEEEEecCC
Confidence            57999999999999999999873     23333222   235577899999988 45        77999988775322 


Q ss_pred             -cCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        146 -VNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       146 -~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                       .....+|+||||+ +++|.+.+....  ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.+ +.++++
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~-~~~~l~  155 (275)
T cd06608          78 PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKN-AEVKLV  155 (275)
T ss_pred             CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccC-CeEEEC
Confidence             2466799999999 556666665432  34689999999999999999999999 99999999999999654 889999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.+..............|++.|+|||++..
T Consensus       156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (275)
T cd06608         156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIAC  187 (275)
T ss_pred             CCccceecccchhhhcCccccccccCHhHhcc
Confidence            99988765544444445678999999998753

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.90  E-value=7.4e-23  Score=177.46  Aligned_cols=163  Identities=29%  Similarity=0.436  Sum_probs=133.1

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||+|.++     .+++..      ......+.+|+.+++.+.|        ++++++++.+.   
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~---   70 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH--------ENIVNLKEAFR---   70 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCC--------CCeeehhheEE---
Confidence            6999999999999999999763     233332      1234567889999999998        66888888776   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....++||||++++++..+.... ..+++..+..++.||+.||.|||.. +++|+||+|+||+++. ++.++++|||+
T Consensus        71 -~~~~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~-~~~~kl~d~g~  146 (288)
T cd07833          71 -RKGRLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSE-SGVLKLCDFGF  146 (288)
T ss_pred             -ECCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECC-CCCEEEEeeec
Confidence             577899999999888887766554 3489999999999999999999999 9999999999999954 58999999999


Q ss_pred             hhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +........ ......++..|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  176 (288)
T cd07833         147 ARALRARPASPLTDYVATRWYRAPELLVGD  176 (288)
T ss_pred             ccccCCCccccccCcccccCCcCCchhcCC
Confidence            876655433 33356788999999998655

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.90  E-value=4.4e-23  Score=183.49  Aligned_cols=166  Identities=24%  Similarity=0.395  Sum_probs=128.2

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|++.+.||+|+||.||+|.+.     ++++...     .....+.+|+.+++.++|        +|++++++.+...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~~~   75 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKH--------ENIIGILDIIRPP   75 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCC--------CCcCchhheeecc
Confidence            357999999999999999999752     3444432     123456779999999988        6688887754421


Q ss_pred             c-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 G-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      . ......|+||||+++++.+.+...   .+++..+..++.||+.||.|||+. ||+||||||+||+++. .+.++++||
T Consensus        76 ~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~-~~~~kl~df  150 (336)
T cd07849          76 SFESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNT-NCDLKICDF  150 (336)
T ss_pred             cccccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECC-CCCEEECcc
Confidence            1 133568999999998888777543   489999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCC---CCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKL---PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~---~~~~~gt~~~~aPE~l~~  253 (284)
                      |++.........   .....||+.|+|||++.+
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  183 (336)
T cd07849         151 GLARIADPEHDHTGFLTEYVATRWYRAPEIMLN  183 (336)
T ss_pred             cceeeccccccccCCcCCcCcCCCccChHHhhC
Confidence            988765433221   224578999999998743

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.90  E-value=5.7e-23  Score=182.89  Aligned_cols=167  Identities=21%  Similarity=0.352  Sum_probs=131.2

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ..+|.+...||.|+||+||+|.+.     ++++....      ....+.+|+.+++.+.|        ++++++++.+..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~ni~~~~~~~~~   75 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDH--------ENVIAIKDIMPP   75 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCC--------CCccchHHheec
Confidence            357999999999999999999863     24443221      23356779999999988        668888876652


Q ss_pred             ec-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CG-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                      .. .....+|+||||++++|.+.+....  .+++..+..++.||+.||.|||+. +++||||||+||+++.+ +.++|+|
T Consensus        76 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~-~~~kL~D  151 (337)
T cd07858          76 PHREAFNDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNAN-CDLKICD  151 (337)
T ss_pred             ccccccCcEEEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCC-CCEEECc
Confidence            21 1224689999999989888876543  599999999999999999999999 99999999999999554 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++..............++..|+|||++.+
T Consensus       152 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (337)
T cd07858         152 FGLARTTSEKGDFMTEYVVTRWYRAPELLLN  182 (337)
T ss_pred             CccccccCCCcccccccccccCccChHHHhc
Confidence            9998766544333445678999999998764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.90  E-value=6.8e-23  Score=180.51  Aligned_cols=165  Identities=18%  Similarity=0.241  Sum_probs=125.1

Q ss_pred             cceEEEEEecccCceeEEEecc------------eeEEEecCCC-----ChhhHHHHHHHHhhh-cCCCCCcccchhccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS------------KTQVLVSPQF-----PETALDEIKLLKCVR-DGDVNDPYRERVVQL  137 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~------------~~~~~~~~~~-----~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l  137 (284)
                      ++|.+.+.||+|+||.||+|.+            ..+++.....     ...+..|+.+++.+. |        ++|+++
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~~iv~~   83 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH--------KNIINL   83 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC--------CCeeeE
Confidence            5799999999999999999864            1234433221     234678999998884 6        779998


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEec
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHT  202 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHr  202 (284)
                      ++.+.    ....+|+||||+ +++|.+++....              ...+++..+..++.||+.||.|||+. |++||
T Consensus        84 ~~~~~----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~  158 (314)
T cd05099          84 LGVCT----QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHR  158 (314)
T ss_pred             EEEEc----cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC-Ceeec
Confidence            88765    667899999999 678888876532              12478899999999999999999999 99999


Q ss_pred             CCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCC--cccCCCCccchhhhhhc
Q psy16752        203 DIKPENVLLCVDEARVKTLALNATELAATGHKLPV--SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       203 DiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~--~~~gt~~~~aPE~l~~~  254 (284)
                      ||||+|||++. ++.++++|||++...........  ...+++.|+|||++.+.
T Consensus       159 dlkp~Nill~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  211 (314)
T cd05099         159 DLAARNVLVTE-DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR  211 (314)
T ss_pred             cccceeEEEcC-CCcEEEccccccccccccccccccccCCCCccccCHHHHccC
Confidence            99999999954 47999999999875543221111  22345679999987543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.90  E-value=3.5e-23  Score=176.91  Aligned_cols=162  Identities=15%  Similarity=0.210  Sum_probs=125.9

Q ss_pred             ceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +|++.+.||+|+||.||++.++    .+++....   ....+.+|+.+++.+.|        ++++++++.+.    ...
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----~~~   72 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH--------PNLVQLYGVCT----KQR   72 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCC--------CCEEEEEEEEc----CCC
Confidence            5889999999999999998763    34444322   23467889999999987        66888887665    667


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ..|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||+. |++||||||+||+++. ++.++++|||++..
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~-~~~~kl~dfg~~~~  149 (256)
T cd05059          73 PIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGE-DNVVKVSDFGLARY  149 (256)
T ss_pred             ceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECC-CCcEEECCccccee
Confidence            899999999 677888776543 2589999999999999999999999 9999999999999954 48899999998875


Q ss_pred             hhhCCCCC-CcccCCCCccchhhhhh
Q psy16752        229 AATGHKLP-VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       229 ~~~~~~~~-~~~~gt~~~~aPE~l~~  253 (284)
                      ........ ....++..|+|||.+.+
T Consensus       150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~  175 (256)
T cd05059         150 VLDDQYTSSQGTKFPVKWAPPEVFDY  175 (256)
T ss_pred             cccccccccCCCCCCccccCHHHhcc
Confidence            54322111 12234457999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.90  E-value=3.9e-23  Score=183.65  Aligned_cols=166  Identities=20%  Similarity=0.393  Sum_probs=131.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||.|+||.||+|.++     .+++...      .....+.+|+.+++.+.|        ++|+++++.+...
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~~~   76 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKH--------DNIIAIRDILRPP   76 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCC--------CCccCHHHhcccc
Confidence            57999999999999999999763     2434321      223456789999999988        6688888877644


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      ......+|+||||+++++.+.+....  .+++..+..++.||+.||.|||.. +|+||||||+||+++. ++.++|+|||
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~-~~~~kl~dfg  152 (334)
T cd07855          77 GADFKDVYVVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNE-DCELRIGDFG  152 (334)
T ss_pred             CCCCceEEEEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcC-CCcEEecccc
Confidence            44567899999999888888775543  489999999999999999999999 9999999999999955 4899999999


Q ss_pred             chhHhhhCCC----CCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHK----LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~  253 (284)
                      .+........    ......++..|+|||++.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (334)
T cd07855         153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLS  185 (334)
T ss_pred             cceeecccCcCCCcccccccccccccChHHhcC
Confidence            9875543321    1224578999999998754

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.90  E-value=6.7e-23  Score=178.45  Aligned_cols=164  Identities=17%  Similarity=0.224  Sum_probs=125.7

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++.+.||+|+||.||++..+          .+++.....     ...+.+|+.+++++ +|        ++++++++
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~~i~~~~~   83 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--------KNIINLLG   83 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCC--------CCeeeEEE
Confidence            57999999999999999998752          233433221     13467799999888 56        67999888


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhh--------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCC
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKS--------------KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI  204 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDi  204 (284)
                      .+.    ....++++|||+ +++|..++...              ....+++..+..++.|++.||.|||+. +|+||||
T Consensus        84 ~~~----~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~dl  158 (293)
T cd05053          84 VCT----QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDL  158 (293)
T ss_pred             EEc----CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-Ccccccc
Confidence            765    667799999999 77888777542              123588999999999999999999999 9999999


Q ss_pred             CCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        205 KPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       205 Kp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      ||+||+++ +++.++++|||++.........  .....++..|+|||++.+
T Consensus       159 kp~Nil~~-~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  208 (293)
T cd05053         159 AARNVLVT-EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD  208 (293)
T ss_pred             ceeeEEEc-CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc
Confidence            99999995 4589999999998765433221  112234567999998744

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.90  E-value=7.7e-23  Score=177.90  Aligned_cols=165  Identities=20%  Similarity=0.244  Sum_probs=127.2

Q ss_pred             cceEEEEEecccCceeEEEecc--------e--eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS--------K--TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~--------~--~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+|.+.+.||+|+||.||++..        .  .+++.....    ...+.+|+.+++.+.|        ++++++++.+
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~   76 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH--------EHIVKFYGVC   76 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC--------CCcceEEEEE
Confidence            4699999999999999999863        1  233333222    2357789999999988        6688888876


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCe
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSK-----------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV  209 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NI  209 (284)
                      .    ....+++||||+ +++|.+++....           ...+++..+..++.||+.||.|||++ |++||||||+||
T Consensus        77 ~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~dlkp~Ni  151 (288)
T cd05093          77 V----EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNC  151 (288)
T ss_pred             e----cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceE
Confidence            5    677899999999 677777776432           12489999999999999999999999 999999999999


Q ss_pred             eEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        210 LLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       210 ll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +++. .+.++++|||++........  ......+++.|+|||++.+.
T Consensus       152 li~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  197 (288)
T cd05093         152 LVGE-NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR  197 (288)
T ss_pred             EEcc-CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccC
Confidence            9954 48999999999875533221  11233457789999988644

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=4.3e-23  Score=179.04  Aligned_cols=163  Identities=21%  Similarity=0.286  Sum_probs=126.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++++.||+|+||.||+|.+.     .+++.....     ...+.+|+.+++.+.|        ++++++++.+.    
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~----   69 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS--------PYIVDFYGAFF----   69 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC--------CcHHhhhhhee----
Confidence            5899999999999999999873     233332211     2457789999999988        66999999877    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSK-YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      ....+|+||||+ +++|..++.... ...+++..+..++.|++.||.|||...+|+||||||+||+++. ++.++++|||
T Consensus        70 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~-~~~~~l~dfg  148 (286)
T cd06622          70 IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG-NGQVKLCDFG  148 (286)
T ss_pred             cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC-CCCEEEeecC
Confidence            678999999999 456655554421 2258999999999999999999996339999999999999965 5899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+......  ......+++.|+|||.+.+.
T Consensus       149 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  176 (286)
T cd06622         149 VSGNLVAS--LAKTNIGCQSYMAPERIKSG  176 (286)
T ss_pred             CcccccCC--ccccCCCccCccCcchhcCC
Confidence            88655332  22345688899999988543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.90  E-value=7.6e-23  Score=175.18  Aligned_cols=165  Identities=17%  Similarity=0.289  Sum_probs=127.2

Q ss_pred             eccceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ..++|++.+.||+|+||.||++...    .+++....   ....+.+|+.+++.+.|        ++++++++.+.    
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----   71 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH--------DKLVKLHAVVT----   71 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCC--------CCcceEEEEEc----
Confidence            3467999999999999999999752    34443322   12457789999999988        56888877654    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      . ...+++|||+ +++|.+++.......+++..+..++.|++.||.|||+. |++||||+|+||+++. .+.++++|||.
T Consensus        72 ~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~-~~~~~l~d~~~  148 (260)
T cd05073          72 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSA-SLVCKIADFGL  148 (260)
T ss_pred             C-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcC-CCcEEECCCcc
Confidence            3 6689999999 67888888765444588899999999999999999999 9999999999999954 58999999998


Q ss_pred             hhHhhhCCCC-CCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKL-PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~-~~~~~gt~~~~aPE~l~~  253 (284)
                      +......... .....++..|+|||++..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  177 (260)
T cd05073         149 ARVIEDNEYTAREGAKFPIKWTAPEAINF  177 (260)
T ss_pred             eeeccCCCcccccCCcccccccCHhHhcc
Confidence            8755432211 122345567999998754

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.90  E-value=4.5e-23  Score=177.85  Aligned_cols=164  Identities=17%  Similarity=0.215  Sum_probs=126.1

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .+|+++..||.|+||.||+|..+          ..++.....     ...+.+|+.++++++|        ++++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~   76 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH--------KNVVRLLGL   76 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCC--------cceeeeEEE
Confidence            46999999999999999999852          233333221     2357889999999988        668888886


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCC-------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC  212 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~  212 (284)
                      +.    .....|+||||+ +++|.+++.....       ..+++..+..++.||+.||.|||+. +|+||||||+||+++
T Consensus        77 ~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp~Nili~  151 (275)
T cd05046          77 CR----EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAARNCLVS  151 (275)
T ss_pred             EC----CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCccceEEEe
Confidence            65    667889999999 5787777765431       1489999999999999999999999 999999999999996


Q ss_pred             eCCCcEEEEeccchhHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        213 VDEARVKTLALNATELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       213 ~~~~~v~l~Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      .+ +.+++.|||++........ ......+++.|++||.+.+
T Consensus       152 ~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  192 (275)
T cd05046         152 SQ-REVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE  192 (275)
T ss_pred             CC-CcEEEcccccccccCcccccccCCceeEEeecChhhhcc
Confidence            54 7899999998764432211 1123345677999997643

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.89  E-value=4.9e-23  Score=176.12  Aligned_cols=163  Identities=17%  Similarity=0.245  Sum_probs=126.7

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      .+|++.+.||+|+||+||++...    .+++.....   ...+.+|+.+++.++|        ++|+++++++.    ..
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~   71 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH--------EKLVQLYGVCT----KQ   71 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCC--------CCeeeEEEEEc----cC
Confidence            35999999999999999999752    344433321   3457889999999988        66999888765    56


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+++||||+ +++|.+.+.... ..+++..+..++.||+.||.|||+. |++|+||||+||+++. ++.++++|||.+.
T Consensus        72 ~~~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~-~~~~kl~d~g~~~  148 (256)
T cd05113          72 RPIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDD-QGCVKVSDFGLSR  148 (256)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcC-CCCEEECCCccce
Confidence            6789999999 567777765543 2589999999999999999999999 9999999999999954 4799999999887


Q ss_pred             HhhhCCCCC-CcccCCCCccchhhhhh
Q psy16752        228 LAATGHKLP-VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~~-~~~~gt~~~~aPE~l~~  253 (284)
                      ......... ....++..|++||.+.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~~pe~~~~  175 (256)
T cd05113         149 YVLDDEYTSSVGSKFPVRWSPPEVLLY  175 (256)
T ss_pred             ecCCCceeecCCCccChhhCCHHHHhc
Confidence            554332111 12335667999998853

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.89  E-value=7.5e-23  Score=177.96  Aligned_cols=164  Identities=19%  Similarity=0.236  Sum_probs=123.8

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|++.+.||+|+||.||+|..+          .+++.....     ...+.+|+.+++.+.|        ++++++++.
T Consensus         6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~   77 (288)
T cd05061           6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC--------HHVVRLLGV   77 (288)
T ss_pred             HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC--------CCeeeEEEE
Confidence            57999999999999999998542          244433221     1245678888988887        668888887


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      +.    .....|+||||+ +|+|.+++.....        ..++...+..++.||+.||.|||++ +|+||||||+||++
T Consensus        78 ~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dikp~nili  152 (288)
T cd05061          78 VS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMV  152 (288)
T ss_pred             Ec----CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCCChheEEE
Confidence            65    567899999999 6788888765321        2246778899999999999999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchhHhhhCCCCC--CcccCCCCccchhhhhh
Q psy16752        212 CVDEARVKTLALNATELAATGHKLP--VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~~~~~~~~~~--~~~~gt~~~~aPE~l~~  253 (284)
                      +. ++.++++|||++..........  ....++..|+|||.+.+
T Consensus       153 ~~-~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  195 (288)
T cd05061         153 AH-DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (288)
T ss_pred             cC-CCcEEECcCCccccccccccccccCCCcccccccCHHHhcc
Confidence            65 5899999999887543322111  12245677999998754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.89  E-value=4.5e-23  Score=178.59  Aligned_cols=168  Identities=21%  Similarity=0.269  Sum_probs=129.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec--
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG--  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~--  145 (284)
                      +.|++.+.||.|+||.||+|.+.     .++++...   ....+..|+.++.++.+       |+|++++++.+....  
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~-------h~~i~~~~~~~~~~~~~   88 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSH-------HRNIATYYGAFIKKSPP   88 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcC-------CCcEEEEeeehhccccc
Confidence            56999999999999999999873     23443222   23456778888888742       277888888764211  


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      .....+|++|||+ +++|.+++.......+++..+..++.||+.||.|||+. +|+|+||+|+||+++. .+.++|+|||
T Consensus        89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~-~~~~~l~dfg  166 (282)
T cd06636          89 GHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTE-NAEVKLVDFG  166 (282)
T ss_pred             CCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECC-CCCEEEeeCc
Confidence            1356899999999 55777777654444588999999999999999999999 9999999999999954 4789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ++..............|++.|+|||++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~aPE~l~  194 (282)
T cd06636         167 VSAQLDRTVGRRNTFIGTPYWMAPEVIA  194 (282)
T ss_pred             chhhhhccccCCCcccccccccCHhhcC
Confidence            9876554333445667999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.89  E-value=3.1e-23  Score=180.66  Aligned_cols=165  Identities=23%  Similarity=0.299  Sum_probs=130.0

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .|++.+.||.|+||.||+|.++.     +++...      .....+.+|+.+++.++|        +|++++++.+.  +
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~ni~~~~~~~~--~   75 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH--------PNIVTVKEVVV--G   75 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC--------CCEEEEEEEEE--e
Confidence            59999999999999999998732     233221      122345789999999988        66888887664  1


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ......|+||||++++|.+.+.... ..+++..+..++.||+.||.|||+. |++|+||+|+||+++. .+.++++|||.
T Consensus        76 ~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~-~~~~~l~d~g~  152 (293)
T cd07843          76 SNLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNN-RGILKICDFGL  152 (293)
T ss_pred             cCCCcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECC-CCcEEEeecCc
Confidence            2337899999999888888876644 3589999999999999999999999 9999999999999955 48999999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|+|||.+.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  181 (293)
T cd07843         153 AREYGSPLKPYTQLVVTLWYRAPELLLGA  181 (293)
T ss_pred             eeeccCCccccccccccccccCchhhcCC
Confidence            87665543333345678899999988643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.89  E-value=8.2e-23  Score=174.17  Aligned_cols=165  Identities=22%  Similarity=0.341  Sum_probs=133.2

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|.+.+.||.|+||.||++..+.     +++...      .....+.+|+.+++.++|        ++++++++.+.   
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h--------~~i~~~~~~~~---   69 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH--------PNIVTFFASFQ---   69 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC--------CChhhhhheec---
Confidence            48999999999999999998732     333321      223466789999999988        66899888776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....|+|+||+ +++|.+.+.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++..++++|||
T Consensus        70 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~~~l~d~~  147 (257)
T cd08225          70 -ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGMVAKLGDFG  147 (257)
T ss_pred             -cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCCeEEecccc
Confidence             678899999999 67888888765544589999999999999999999999 999999999999997665678999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+..............|++.|+|||++.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~  177 (257)
T cd08225         148 IARQLNDSMELAYTCVGTPYYLSPEICQNR  177 (257)
T ss_pred             cchhccCCcccccccCCCccccCHHHHcCC
Confidence            887665544334455689999999987543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.89  E-value=6.4e-23  Score=182.28  Aligned_cols=165  Identities=18%  Similarity=0.249  Sum_probs=125.5

Q ss_pred             cceEEEEEecccCceeEEEecc------------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS------------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQL  137 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~------------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l  137 (284)
                      .+|++.+.||+|+||.||+|.+            ..+++.....     ...+.+|+.+++++ .|        ++|+++
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~~iv~~   83 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH--------KNIINL   83 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCC--------CCeeee
Confidence            4699999999999999999964            1244433221     24577899999998 56        679988


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEec
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHT  202 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHr  202 (284)
                      ++.+.    ....++++|||+ +++|.+++.+..              ...+++..+..++.|++.||.|||.. |++||
T Consensus        84 ~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-givH~  158 (334)
T cd05100          84 LGACT----QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHR  158 (334)
T ss_pred             eEEEc----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-Ceecc
Confidence            88765    667899999999 668887776532              12377888999999999999999999 99999


Q ss_pred             CCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCC--cccCCCCccchhhhhhc
Q psy16752        203 DIKPENVLLCVDEARVKTLALNATELAATGHKLPV--SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       203 DiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~--~~~gt~~~~aPE~l~~~  254 (284)
                      ||||+|||++.+ +.++|+|||++...........  ...+++.|+|||++.+.
T Consensus       159 dlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  211 (334)
T cd05100         159 DLAARNVLVTED-NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR  211 (334)
T ss_pred             ccccceEEEcCC-CcEEECCcccceecccccccccccCCCcCceEcCHHHhccC
Confidence            999999999554 8999999999875433221111  22345679999987543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.89  E-value=5.8e-23  Score=177.94  Aligned_cols=162  Identities=17%  Similarity=0.214  Sum_probs=121.9

Q ss_pred             cceEEEEEecccCceeEEEecce---------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ++|++.+.||+|+||+||+|.+.         ..++.....     ...+..|+.+++.+.|        +||+++++.+
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h--------~~iv~~~~~~   78 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDH--------AYIVRLLGIC   78 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCC--------CCcceEEEEE
Confidence            46999999999999999999751         233332211     1334556667777777        6688888754


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .     ....++++||+ +|+|.+.+.... ..+++..+..++.||+.||.|||+. +++||||||+|||++. ++.+++
T Consensus        79 ~-----~~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~-~~~~kl  150 (279)
T cd05111          79 P-----GASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKS-DSIVQI  150 (279)
T ss_pred             C-----CCccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcC-CCcEEE
Confidence            2     34577889998 788888886544 3589999999999999999999999 9999999999999954 489999


Q ss_pred             EeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        221 LALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|||.+........  ......++..|++||.+.+
T Consensus       151 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  185 (279)
T cd05111         151 ADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF  185 (279)
T ss_pred             cCCccceeccCCCcccccCCCCCcccccCHHHhcc
Confidence            99999876543321  1123456778999998854

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.89  E-value=4.8e-23  Score=177.21  Aligned_cols=157  Identities=15%  Similarity=0.128  Sum_probs=117.0

Q ss_pred             EecccCceeEEEecce-------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         83 KLGWGHFSTVWFTGSK-------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .||+|+||.||+|...       .+++.....     ...+.+|+.+++.+.|        +||+++++.+.    ....
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h--------~nii~~~~~~~----~~~~   69 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH--------PNVLQCLGQCI----ESIP   69 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC--------CCcceEEEEEC----CCCc
Confidence            6899999999998541       122222111     2346788889888887        66999988765    6778


Q ss_pred             EEEEeccC-CccHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKY---RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      +|+||||+ +++|.+++.....   ...++..+..++.||+.||.|||+. +|+||||||+|||++. ++.++++|||++
T Consensus        70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~-~~~~kl~dfg~~  147 (269)
T cd05042          70 YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTA-DLSVKIGDYGLA  147 (269)
T ss_pred             eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecC-CCcEEEeccccc
Confidence            99999999 6677777765432   2246788899999999999999999 9999999999999955 489999999987


Q ss_pred             hHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ........  ......+++.|+|||++..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05042         148 LEQYPEDYYITKDCHAVPLRWLAPELVEI  176 (269)
T ss_pred             cccccchheeccCCCCCcccccCHHHHhh
Confidence            64332211  1123345677999998754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.89  E-value=8.9e-23  Score=177.76  Aligned_cols=165  Identities=20%  Similarity=0.245  Sum_probs=127.8

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ++|.+...||+|+||.||+|.+.          .+++.....    ...+.+|+.+++.+.|        ++++++++.+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~   76 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH--------EHIVKFYGVC   76 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC--------CCcceEEEEE
Confidence            46999999999999999998631          233332222    2457789999999988        6688888876


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCC
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP  206 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp  206 (284)
                      .    .....++||||+ +++|.+++....              ...+++..+..++.||+.||.|||.+ ||+||||||
T Consensus        77 ~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp  151 (291)
T cd05094          77 G----DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLAT  151 (291)
T ss_pred             c----cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCc
Confidence            5    677899999999 678877776532              12378999999999999999999999 999999999


Q ss_pred             CCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        207 ENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       207 ~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++.+ +.++++|||++........  ......++..|+|||++.+.
T Consensus       152 ~Nil~~~~-~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  200 (291)
T cd05094         152 RNCLVGAN-LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR  200 (291)
T ss_pred             ceEEEccC-CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccC
Confidence            99999554 8999999999875443221  12244568889999987543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.89  E-value=6.6e-23  Score=177.90  Aligned_cols=163  Identities=23%  Similarity=0.277  Sum_probs=125.8

Q ss_pred             eEEEEEecccCceeEEEecc---------eeEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS---------KTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      |++++.||+|+||.||+|..         ..+++....     ....+.+|+.+++.+.|        ++++++++.+..
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~~   77 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH--------ENIVKYKGICTE   77 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCC--------CCeeeeeeEEec
Confidence            79999999999999999863         124444321     12457789999999988        668888776541


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                        ......++||||+ +++|.+.+.+.. ..+++..+..++.||+.||.|||+. |++||||||+||+++. ++.++++|
T Consensus        78 --~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~-~~~~~l~d  152 (284)
T cd05079          78 --DGGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVES-EHQVKIGD  152 (284)
T ss_pred             --CCCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcC-CCCEEECC
Confidence              1246789999999 677777765543 3489999999999999999999999 9999999999999955 47899999


Q ss_pred             ccchhHhhhCCC---CCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHK---LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++........   ......++..|+|||++.+
T Consensus       153 fg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~  186 (284)
T cd05079         153 FGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ  186 (284)
T ss_pred             CccccccccCccceeecCCCCCCccccCHHHhcc
Confidence            999876544322   1224567788999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG4645|consensus

Probab=99.89  E-value=3.8e-24  Score=206.76  Aligned_cols=165  Identities=22%  Similarity=0.299  Sum_probs=131.1

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEE---e---cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVL---V---SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~---~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|+-...||.|.||.||-|.+-.     +++   .   .......+.+|..++..+.|        +|++++|+.-.   
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnH--------pNlV~YyGVEv--- 1304 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNH--------PNLVRYYGVEV--- 1304 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccC--------ccccccCceee---
Confidence            57777899999999999987621     111   0   12234456789999999999        66888888543   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....++|.|||| +|+|.+.+.+.+  -.++...+.+..|++.||.|||.+ |||||||||+||+|+.+ +.+|+.|||
T Consensus      1305 -HRekv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~-g~iK~~DFG 1379 (1509)
T KOG4645|consen 1305 -HREKVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFN-GLIKYGDFG 1379 (1509)
T ss_pred             -cHHHHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecC-CcEEeeccc
Confidence             788899999999 677777766543  478888999999999999999999 99999999999999555 799999999


Q ss_pred             chhHhhhCC-CCCC---cccCCCCccchhhhhhccch
Q psy16752        225 ATELAATGH-KLPV---SFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       225 ~a~~~~~~~-~~~~---~~~gt~~~~aPE~l~~~~~~  257 (284)
                      .|.....+. ..+.   ...|||-|||||++++...+
T Consensus      1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~k 1416 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGK 1416 (1509)
T ss_pred             ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccC
Confidence            988776654 2222   56899999999999886543

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.89  E-value=3.7e-23  Score=178.81  Aligned_cols=154  Identities=16%  Similarity=0.181  Sum_probs=114.4

Q ss_pred             EecccCceeEEEecce-----------------------------eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCc
Q psy16752         83 KLGWGHFSTVWFTGSK-----------------------------TQVLVSPQF----PETALDEIKLLKCVRDGDVNDP  129 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-----------------------------~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~  129 (284)
                      .||+|+||.||++...                             .++++....    ...+..|+.+++.+.|      
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h------   75 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSH------   75 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCC------
Confidence            6899999999988631                             123322211    2345667788888887      


Q ss_pred             ccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCe
Q psy16752        130 YRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV  209 (284)
Q Consensus       130 ~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NI  209 (284)
                        +||+++++.+.    .....++||||+.++.++.+.......+++..+..++.||+.||.|||++ +|+||||||+||
T Consensus        76 --~niv~~~~~~~----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~Ni  148 (274)
T cd05076          76 --IHLAFVHGVCV----RGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK-NLVHGNVCAKNI  148 (274)
T ss_pred             --CCeeeEEEEEE----eCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC-CccCCCCCcccE
Confidence              67999998765    66788999999955444444443334689999999999999999999999 999999999999


Q ss_pred             eEeeCC------CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        210 LLCVDE------ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       210 ll~~~~------~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |++...      ..++++|||.+......    ....++.+|+|||.+.+
T Consensus       149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~  194 (274)
T cd05076         149 LLARLGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPG  194 (274)
T ss_pred             EEeccCcccCccceeeecCCccccccccc----cccccCCcccCchhhcC
Confidence            996432      25899999987543222    13357888999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.89  E-value=3.5e-23  Score=178.87  Aligned_cols=164  Identities=21%  Similarity=0.240  Sum_probs=127.4

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|.+.+.||+|+||.||+|...          .+++.....     .+.+.+|+.+++.+.|        ++++++++.
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~   76 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH--------ENIVKFYGV   76 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCC--------CCchheeeE
Confidence            45999999999999999998652          244443221     2467889999999988        668888887


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                      +.    .....|+||||+ +++|.+++....            ...+++..+..++.|++.||.|||.+ |++||||||+
T Consensus        77 ~~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h~dlkp~  151 (280)
T cd05049          77 CT----EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATR  151 (280)
T ss_pred             Ee----cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-Ceeccccccc
Confidence            76    667899999999 778877776432            12478899999999999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||+++.+ +.++++|||++........  ......+++.|+|||++.+
T Consensus       152 nili~~~-~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05049         152 NCLVGYD-LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY  198 (280)
T ss_pred             eEEEcCC-CeEEECCcccceecccCcceecCCCCcccceecChhhhcc
Confidence            9999555 8999999998865432211  1223446788999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.89  E-value=5.1e-23  Score=175.62  Aligned_cols=154  Identities=16%  Similarity=0.168  Sum_probs=118.7

Q ss_pred             EEecccCceeEEEeccee---------------EEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         82 RKLGWGHFSTVWFTGSKT---------------QVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~~---------------~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +.||+|+||.||+|.++.               ++++....   ...+.+|+.+++.+.|        ++++++++.+. 
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~-   71 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH--------KHLVKLYGVCV-   71 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC--------cchhheeeEEe-
Confidence            368999999999998732               22221111   3567788899999888        66898888665 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC------
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA------  216 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~------  216 (284)
                         . ...++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+..      
T Consensus        72 ---~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~~~~~~  145 (259)
T cd05037          72 ---R-DENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGLNEGYVP  145 (259)
T ss_pred             ---c-CCcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCccccCCce
Confidence               3 5679999999 566666665543 2589999999999999999999999 9999999999999976531      


Q ss_pred             cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++++|||++.....    .....++.+|+|||++.+.
T Consensus       146 ~~kl~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~  179 (259)
T cd05037         146 FIKLSDPGIPITVLS----REERVERIPWIAPECIRNG  179 (259)
T ss_pred             eEEeCCCCccccccc----ccccccCCCccChhhhcCC
Confidence            699999999876543    2234567889999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.89  E-value=5.9e-23  Score=183.17  Aligned_cols=167  Identities=22%  Similarity=0.310  Sum_probs=127.2

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .++|++.+.||.|+||.||+|.++     .+++...    .....+.+|+.+++.++|        ++++++++.+...+
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h--------~~i~~~~~~~~~~~   75 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH--------DNIVKVYEVLGPSG   75 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCC--------CcchhhHhhhcccc
Confidence            358999999999999999999763     2333221    123457789999999988        55787776654211


Q ss_pred             c----------CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        146 V----------NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       146 ~----------~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      .          .....|+||||+++++.+.+...   .+++..++.++.||+.||.|||.. ||+||||||+||+++.++
T Consensus        76 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Nili~~~~  151 (342)
T cd07854          76 SDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANVFINTED  151 (342)
T ss_pred             cccccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCC
Confidence            1          22468999999988887777543   489999999999999999999999 999999999999997676


Q ss_pred             CcEEEEeccchhHhhhCCC---CCCcccCCCCccchhhhhh
Q psy16752        216 ARVKTLALNATELAATGHK---LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~  253 (284)
                      ..++++|||.+........   ......++..|+|||++.+
T Consensus       152 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  192 (342)
T cd07854         152 LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLS  192 (342)
T ss_pred             ceEEECCcccceecCCccccccccccccccccccCHHHHhC
Confidence            7899999999875432211   1122357889999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=9.6e-23  Score=173.96  Aligned_cols=160  Identities=20%  Similarity=0.278  Sum_probs=127.2

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .+|++.+.||.|+||.||+|...   .+++.....   .+.+.+|+.+++.+.|        ++++++++.+.    ...
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----~~~   73 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRH--------PNLVQLLGVVL----QGN   73 (256)
T ss_pred             hhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCC--------cceeeeEEEEc----CCC
Confidence            46999999999999999999773   244443332   3467889999999988        66888888765    577


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ..|+||||+ +++|.+++.......+++..+..++.|++.||.|||.. |++||||||+||+++. .+.++|+|||.+..
T Consensus        74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~-~~~~~l~d~g~~~~  151 (256)
T cd05039          74 PLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSE-DLVAKVSDFGLAKE  151 (256)
T ss_pred             CeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeC-CCCEEEcccccccc
Confidence            899999999 57888877665444589999999999999999999999 9999999999999954 48899999999876


Q ss_pred             hhhCCCCCCcccCCCCccchhhhh
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ......   ...++..|+|||.+.
T Consensus       152 ~~~~~~---~~~~~~~~~ape~~~  172 (256)
T cd05039         152 ASQGQD---SGKLPVKWTAPEALR  172 (256)
T ss_pred             cccccc---cCCCcccccCchhhc
Confidence            633221   233456689999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.89  E-value=6.7e-23  Score=174.82  Aligned_cols=164  Identities=21%  Similarity=0.302  Sum_probs=130.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||++...     .+++...      .....+.+|+.+++.+.|        ++++++++.+.   
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~---   69 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH--------PNIVQYQESFE---   69 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC--------CCeeeeEeeec---
Confidence            4999999999999999998762     2333221      123467889999999988        66888888776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ...+.|+||||+ +++|.+.+.......+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.++++|||
T Consensus        70 -~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~-~~~~~l~d~~  146 (256)
T cd08218          70 -ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTK-DGTIKLGDFG  146 (256)
T ss_pred             -CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcC-CCCEEEeecc
Confidence             778999999999 67888877665444588999999999999999999999 9999999999999955 4789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+..............|++.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  176 (256)
T cd08218         147 IARVLNSTVELARTCIGTPYYLSPEICENR  176 (256)
T ss_pred             ceeecCcchhhhhhccCCccccCHHHhCCC
Confidence            887554433233345688999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=8e-23  Score=174.95  Aligned_cols=162  Identities=26%  Similarity=0.310  Sum_probs=127.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .|.+.+.||+|++|.||.|.+.     .+++....         ....+.+|+.+++.++|        ++++++++.+.
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~   74 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH--------ERIVQYYGCLR   74 (263)
T ss_pred             cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC--------CCeeeeEEEEc
Confidence            5899999999999999999652     24443211         12356779999999988        66899988776


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+++||||+ ++++.+.+....  .+++..+..++.|++.||.|||+. ||+||||+|+||+++ +++.++|+
T Consensus        75 ----~~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~-~~~~~~l~  146 (263)
T cd06625          75 ----DDETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRD-SAGNVKLG  146 (263)
T ss_pred             ----cCCeEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEc-CCCCEEEe
Confidence                667999999999 667777776543  489999999999999999999999 999999999999995 44899999


Q ss_pred             eccchhHhhhCCCCC---CcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLP---VSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~---~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++..........   ....++..|+|||++.+.
T Consensus       147 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (263)
T cd06625         147 DFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGE  182 (263)
T ss_pred             ecccceeccccccccccccCCCcCccccCcceeccC
Confidence            999987543322111   235678899999987643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.89  E-value=9.4e-23  Score=179.10  Aligned_cols=165  Identities=22%  Similarity=0.292  Sum_probs=128.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .+|++.+.||+|+||.||+|.++     ++++....      ......+|+.+++.++|        ++++++++.+.  
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~--   76 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRH--------PNIVELKEVVV--   76 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCC--------CCCcceEEEEe--
Confidence            46999999999999999999763     23333221      12245689999999998        66888887654  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      +.....+++||||++++|.+.+.... ..+++..+..++.||+.||.|||+. |++||||||+||+++. .+.++|+|||
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~-~~~~kL~dfg  153 (309)
T cd07845          77 GKHLDSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTD-KGCLKIADFG  153 (309)
T ss_pred             cCCCCeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECC-CCCEEECccc
Confidence            22335789999999888888877643 3589999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      .+..............+++.|+|||++.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (309)
T cd07845         154 LARTYGLPAKPMTPKVVTLWYRAPELLLG  182 (309)
T ss_pred             eeeecCCccCCCCcccccccccChhhhcC
Confidence            98766543322233346888999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.89  E-value=7.3e-23  Score=186.16  Aligned_cols=165  Identities=18%  Similarity=0.258  Sum_probs=127.5

Q ss_pred             cceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhhh-cCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCVR-DGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~  139 (284)
                      .+|.+.+.||+|+||.||+|.+          ..++|+....     .+.+.+|+.++.++. |        +||+++++
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H--------~niv~~~~  108 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH--------LNIVNLLG  108 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCC--------CCeEEEEE
Confidence            4588999999999999999974          2355544322     135678999999987 6        77999988


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCC-----------------------------------------------
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-----------------------------------------------  171 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----------------------------------------------  171 (284)
                      .+.    ....+++||||+ +|+|.+++.+...                                               
T Consensus       109 ~~~----~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (401)
T cd05107         109 ACT----KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKD  184 (401)
T ss_pred             EEc----cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCc
Confidence            776    667899999999 7888888764321                                               


Q ss_pred             -------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEec
Q psy16752        172 -------------------------------------------------RGIPLENVRSIIRQILQGLNYLHTKCRIIHT  202 (284)
Q Consensus       172 -------------------------------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~givHr  202 (284)
                                                                       ..+++..+..++.||+.||.|||+. +|+||
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHr  263 (401)
T cd05107         185 ESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK-NCVHR  263 (401)
T ss_pred             cccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcCcc
Confidence                                                             1356778889999999999999999 99999


Q ss_pred             CCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        203 DIKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       203 DiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||||+|||++. ...++++|||++........  ......+++.|+|||.+.+.
T Consensus       264 dlkp~NiLl~~-~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  316 (401)
T cd05107         264 DLAARNVLICE-GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN  316 (401)
T ss_pred             cCCcceEEEeC-CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCC
Confidence            99999999954 58999999999875433221  12234577889999987543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.89  E-value=5.6e-23  Score=176.51  Aligned_cols=154  Identities=16%  Similarity=0.175  Sum_probs=116.1

Q ss_pred             EEecccCceeEEEecce-----------------eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         82 RKLGWGHFSTVWFTGSK-----------------TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----------------~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      +.||+|+||.||+|...                 .++++...    ....+..|+.+++.++|        +||+++++.
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h--------p~iv~~~~~   72 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH--------KHIVLLYGV   72 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC--------CCEeeEEEE
Confidence            36899999999999631                 23333221    22355677888888888        679999987


Q ss_pred             ceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC----
Q psy16752        141 FKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA----  216 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~----  216 (284)
                      +.    .....++||||++++.++.+.......+++..+..++.||+.||.|||++ +|+||||||+|||++.+..    
T Consensus        73 ~~----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~~~~  147 (262)
T cd05077          73 CV----RDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAREGIDGEC  147 (262)
T ss_pred             Ee----cCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEecCCccCCC
Confidence            65    66778999999965554444443334589999999999999999999999 9999999999999965421    


Q ss_pred             --cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        217 --RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       217 --~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                        .++++|||++......    ....++.+|+|||.+.
T Consensus       148 ~~~~~l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~  181 (262)
T cd05077         148 GPFIKLSDPGIPITVLSR----QECVERIPWIAPECVE  181 (262)
T ss_pred             CceeEeCCCCCCccccCc----ccccccccccChhhhc
Confidence              3899999987644322    2345788999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.89  E-value=7.3e-23  Score=178.15  Aligned_cols=163  Identities=19%  Similarity=0.244  Sum_probs=123.8

Q ss_pred             ceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      +|++.+.||+|+||.||+|...          .+++.....     ...+.+|+.+++.+.|        ++|+++++.+
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~   72 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH--------PHVIKLYGAC   72 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC--------CCEeeEEEEE
Confidence            4888999999999999998752          233332221     2357789999999988        6689988876


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSK----------------------YRGIPLENVRSIIRQILQGLNYLHTKCR  198 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~g  198 (284)
                      .    .....+++|||+ +++|.+++....                      ...+++..+..++.|++.||.|||+. +
T Consensus        73 ~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~  147 (290)
T cd05045          73 S----QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-K  147 (290)
T ss_pred             e----cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC-C
Confidence            5    667789999999 577777665421                      12478899999999999999999999 9


Q ss_pred             cEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        199 IIHTDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       199 ivHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      ++||||||+|||++ +++.++|+|||++.........  .....++..|+|||++.+
T Consensus       148 ivH~dikp~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~  203 (290)
T cd05045         148 LVHRDLAARNVLVA-EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD  203 (290)
T ss_pred             eehhhhhhheEEEc-CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc
Confidence            99999999999995 4589999999998754332221  123345678999998643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.89  E-value=4.8e-23  Score=176.79  Aligned_cols=164  Identities=23%  Similarity=0.360  Sum_probs=129.7

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||.||+|..+     .+++....       ....+.+|+.+++.+.|        ++++++++.+.  
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~--   72 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH--------PNVIKYYASFI--   72 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC--------CchhhhhheeE--
Confidence            5899999999999999999852     23332211       12456789999999988        66898888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                        .....+++|||+ +++|.+.+...  ....+++..+..++.||+.||.|||+. |++|+||+|+||+++. ++.++++
T Consensus        73 --~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~-~~~~~l~  148 (267)
T cd08229          73 --EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITA-TGVVKLG  148 (267)
T ss_pred             --eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcC-CCCEEEC
Confidence              677899999999 56777766532  123489999999999999999999999 9999999999999954 4799999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||.+..............++..|+|||.+.+.
T Consensus       149 dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~  181 (267)
T cd08229         149 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN  181 (267)
T ss_pred             cchhhhccccCCcccccccCCcCccCHHHhcCC
Confidence            999887665444444456789999999988543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.89  E-value=8.3e-23  Score=174.45  Aligned_cols=162  Identities=16%  Similarity=0.212  Sum_probs=125.7

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .+|++.+.||+|+||.||++..+   .+++....  ..+.+.+|+.+++.+.|        ++++++++.+.   .....
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~---~~~~~   74 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH--------SNLVQLLGVIV---EEKGG   74 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCC--------CCeeeEEEEEE---cCCCc
Confidence            36999999999999999998663   23343322  23457789999999988        56888877542   14567


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      .++||||+ +++|.+.+.......+++..+..++.||+.||.|||++ |++||||||+||+++. ++.++++|||++...
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~~  152 (256)
T cd05082          75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSE-DNVAKVSDFGLTKEA  152 (256)
T ss_pred             eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcC-CCcEEecCCccceec
Confidence            89999999 56888887665444588999999999999999999999 9999999999999954 589999999988754


Q ss_pred             hhCCCCCCcccCCCCccchhhhhh
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ....   ....++..|+|||++.+
T Consensus       153 ~~~~---~~~~~~~~y~aPE~~~~  173 (256)
T cd05082         153 SSTQ---DTGKLPVKWTAPEALRE  173 (256)
T ss_pred             cccC---CCCccceeecCHHHHcc
Confidence            3321   23345567999998754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.89  E-value=1.5e-23  Score=179.46  Aligned_cols=154  Identities=18%  Similarity=0.213  Sum_probs=117.9

Q ss_pred             EEecccCceeEEEeccee------------EEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         82 RKLGWGHFSTVWFTGSKT------------QVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~~------------~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +.||.|+||.||+|..+.            +++...    ...+.+..|+.+++.+.|        +|++.+++.+.   
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h--------~~iv~~~~~~~---   69 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH--------KHLVLNYGVCV---   69 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC--------CChhheeeEEE---
Confidence            368999999999997531            112211    112456778888888887        66999988776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc-------
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR-------  217 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~-------  217 (284)
                       .....++||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++..       
T Consensus        70 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~~~~~~~  146 (258)
T cd05078          70 -CGDESIMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRKTGNPPF  146 (258)
T ss_pred             -eCCCcEEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccccCCCce
Confidence             566789999999 556666665443 3589999999999999999999999 99999999999999766433       


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++++|||.+.....    .....++.+|+|||++.+
T Consensus       147 ~~l~d~g~~~~~~~----~~~~~~~~~y~aPE~~~~  178 (258)
T cd05078         147 IKLSDPGISITVLP----KEILLERIPWVPPECIEN  178 (258)
T ss_pred             EEecccccccccCC----chhccccCCccCchhccC
Confidence            79999998764432    224568889999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG1163|consensus

Probab=99.89  E-value=1.5e-22  Score=164.83  Aligned_cols=167  Identities=19%  Similarity=0.318  Sum_probs=130.8

Q ss_pred             eeccceEEEEEecccCceeEEEecc-----eeEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +..++|+++++||.|+||.+|+|..     .+++++...  ....+..|..+++.+++.       .+|+.+.....   
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g-------~GiP~i~~y~~---   81 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGG-------VGIPHIRHYGT---   81 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccC-------CCCchhhhhcc---
Confidence            4457899999999999999999975     446655333  345678899999999874       33443333332   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcEEEEec
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARVKTLAL  223 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v~l~Df  223 (284)
                       ...+-.+||+++|.+|.+++.-+. +.++...++-++-|++.-++|+|.+ ++|||||||+|+|..-+  ...+.++||
T Consensus        82 -e~~ynvlVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh~~kl~LIDF  158 (341)
T KOG1163|consen   82 -EKDYNVLVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRHCNKLYLIDF  158 (341)
T ss_pred             -ccccceeeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccccceEEEEec
Confidence             788899999999999999887765 4599999999999999999999999 99999999999999644  458999999


Q ss_pred             cchhHhhhCCCCC-------CcccCCCCccchhhhh
Q psy16752        224 NATELAATGHKLP-------VSFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~~~~-------~~~~gt~~~~aPE~l~  252 (284)
                      |+|+..-+.....       ..+.||+.|.+-....
T Consensus       159 GLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~  194 (341)
T KOG1163|consen  159 GLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHL  194 (341)
T ss_pred             cchhhhccccccccCccccCCccceeeeehhhhhhh
Confidence            9999765443221       2567899988654443

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.89  E-value=1.4e-22  Score=175.66  Aligned_cols=166  Identities=20%  Similarity=0.239  Sum_probs=125.4

Q ss_pred             cceEEEEEecccCceeEEEecc---------eeEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS---------KTQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .+|++++.||+|+||.||+|..         ..+++.....    .+.+.+|+.+++.++|        +|++++++.+.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~   75 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH--------DNIVKYKGVCY   75 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC--------CCeeEEEEEEc
Confidence            3699999999999999999863         2344443222    2356789999999988        66888877543


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                        ......+++||||+ +++|.+++.... ..+++..+..++.|++.||.|||.. ||+||||||+||+++. ++.++|+
T Consensus        76 --~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~-~~~~~l~  150 (284)
T cd05081          76 --SAGRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVES-ENRVKIG  150 (284)
T ss_pred             --cCCCCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECC-CCeEEEC
Confidence              12445789999999 678888776543 3489999999999999999999999 9999999999999954 4789999


Q ss_pred             eccchhHhhhCCCCC---CcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLP---VSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~---~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++..........   ....++..|+|||++.+.
T Consensus       151 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  186 (284)
T cd05081         151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTES  186 (284)
T ss_pred             CCcccccccCCCcceeecCCCCCceEeeCHHHhccC
Confidence            999988654432211   111234459999988654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.89  E-value=1.1e-22  Score=175.89  Aligned_cols=163  Identities=21%  Similarity=0.226  Sum_probs=122.7

Q ss_pred             ccceEEEEEecccCceeEEEecce---------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ..+|++++.||.|+||+||+|.+.         +++|.....     ...+..|+.++..+.|        ++++.+++.
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~   77 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS--------PYVCRLLGI   77 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC--------CCCceEEEE
Confidence            357999999999999999999741         244443221     2345678888888877        568877775


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.     ....+++|+|+ +|++.+.+.... ..+++..+..++.||+.||.|||+. +|+||||||+|||++ +.+.++
T Consensus        78 ~~-----~~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~-~~~~~k  149 (279)
T cd05109          78 CL-----TSTVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVK-SPNHVK  149 (279)
T ss_pred             Ec-----CCCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEc-CCCcEE
Confidence            53     34577899999 678887776533 3589999999999999999999999 999999999999995 457899


Q ss_pred             EEeccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        220 TLALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      |+|||++.........  .....+++.|++||++.+
T Consensus       150 L~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (279)
T cd05109         150 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILH  185 (279)
T ss_pred             ECCCCceeecccccceeecCCCccchhhCCHHHhcc
Confidence            9999998765433221  112234677999998754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.89  E-value=1.1e-22  Score=177.74  Aligned_cols=164  Identities=18%  Similarity=0.213  Sum_probs=122.5

Q ss_pred             cceEEEEEecccCceeEEEecce-------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||.||+|..+       .+++.....     .+.+.+|+.++.++.+       |++++++++.+. 
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~-------hp~iv~~~~~~~-   73 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGH-------HPNIINLLGACE-   73 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcC-------CCchhheEEEEc-
Confidence            36999999999999999998652       233333321     2356789999988842       277999888765 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCC
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPEN  208 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~N  208 (284)
                         ....+|+||||+ +++|.+++....              ...+++..+..++.|++.||.|||+. ||+||||||+|
T Consensus        74 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~N  149 (297)
T cd05089          74 ---NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHRDLAARN  149 (297)
T ss_pred             ---cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCcCCcce
Confidence               667899999999 678888876532              12478899999999999999999999 99999999999


Q ss_pred             eeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        209 VLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       209 Ill~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++. ++.++|+|||++....... .......+..|+|||++.+
T Consensus       150 ill~~-~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  192 (297)
T cd05089         150 VLVGE-NLASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNY  192 (297)
T ss_pred             EEECC-CCeEEECCcCCCcccccee-ccCCCCcCccccCchhhcc
Confidence            99955 4789999999875322110 1111223456999998754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.89  E-value=1.1e-22  Score=176.83  Aligned_cols=162  Identities=21%  Similarity=0.304  Sum_probs=127.3

Q ss_pred             ceEEEEEecccCceeEEEecce--------eEEEecCC--------CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQ--------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .|++.+.||.|+||.||+|.+.        .++++...        ..+.+..|+.+++.+.+       |++|+.++..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-------~~~i~~~~~~   73 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ-------SPFLVTLHYA   73 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhccc-------CCChhceeeE
Confidence            3899999999999999998752        23443221        12456779999999864       2678888877


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.    ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+. |++||||+|+|||++.+ +.++
T Consensus        74 ~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~-~~~k  145 (290)
T cd05613          74 FQ----TDTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDSN-GHVV  145 (290)
T ss_pred             ee----cCCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECCC-CCEE
Confidence            76    667899999999 678888776543  589999999999999999999999 99999999999999654 8999


Q ss_pred             EEeccchhHhhhCC-CCCCcccCCCCccchhhhhh
Q psy16752        220 TLALNATELAATGH-KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       220 l~Dfg~a~~~~~~~-~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |+|||++....... .......|+..|+|||.+.+
T Consensus       146 l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (290)
T cd05613         146 LTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRG  180 (290)
T ss_pred             EeeCccceecccccccccccccCCcccCChhhccC
Confidence            99999887654322 22235668999999998854

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.89  E-value=1.1e-22  Score=173.73  Aligned_cols=161  Identities=25%  Similarity=0.372  Sum_probs=129.7

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||.|+||.||+|.+.     .++++..       .....+.+|+.++++++|        ++++++++.+.  
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~--   70 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH--------PFLVNLWYSFQ--   70 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCC--------CChHHHHHhhc--
Confidence            4899999999999999999773     2333322       123567889999999988        66888888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        .....|+||||+ +++|...+...  ..+++..+..++.||+.||.|||.. +++|+||+|+||+++. ++.++++||
T Consensus        71 --~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~-~~~~~l~d~  144 (258)
T cd05578          71 --DEENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDE-QGHVHITDF  144 (258)
T ss_pred             --CCCeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcC-CCCEEEeec
Confidence              788899999999 66777776554  3589999999999999999999999 9999999999999955 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |.+....... ......|+..|+|||.+.+.
T Consensus       145 ~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~  174 (258)
T cd05578         145 NIATKVTPDT-LTTSTSGTPGYMAPEVLCRQ  174 (258)
T ss_pred             ccccccCCCc-cccccCCChhhcCHHHHccc
Confidence            9887654432 22345688899999987643

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.89  E-value=9.7e-23  Score=175.38  Aligned_cols=157  Identities=17%  Similarity=0.153  Sum_probs=118.2

Q ss_pred             EecccCceeEEEecce-------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         83 KLGWGHFSTVWFTGSK-------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .||+|+||.||+|...       .+++.....     ...+.+|+.+++.++|        ++++++++.+.    ....
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~----~~~~   69 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH--------SNLLQCLGQCT----EVTP   69 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEc----CCCC
Confidence            6899999999998641       233332221     1356779999999988        66888888665    6677


Q ss_pred             EEEEeccC-CccHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKY---RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      +++||||+ +++|.+.+.....   ...++..+..++.|++.||.|||+. +++||||||+||+++. .+.++++|||.+
T Consensus        70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~-~~~~kL~dfg~~  147 (269)
T cd05087          70 YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTA-DLTVKIGDYGLS  147 (269)
T ss_pred             cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcC-CCcEEECCcccc
Confidence            89999999 5777777764321   2356778889999999999999999 9999999999999955 589999999988


Q ss_pred             hHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ........  ......+++.|+|||++.+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05087         148 HNKYKEDYYVTPDQLWVPLRWIAPELVDE  176 (269)
T ss_pred             ccccCcceeecCCCcCCcccccCHhHhcc
Confidence            64432221  1123457888999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.89  E-value=1.2e-22  Score=175.83  Aligned_cols=162  Identities=27%  Similarity=0.389  Sum_probs=129.8

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |++.+.||.|++|.||+|.++     .+++...      .....+.+|+.+++.++|        ++++++++.+.    
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~--------~~iv~~~~~~~----   68 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH--------PNIVRLLDVVH----   68 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC--------CCccCHhheec----
Confidence            678899999999999999763     2333322      122457789999999988        66888888766    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      .....|++|||+++++.+.+.......+++..+..++.|++.||.|||+. +++||||+|+||+++. ++.++++|||.+
T Consensus        69 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~-~~~~~l~df~~~  146 (283)
T cd07835          69 SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDR-EGALKLADFGLA  146 (283)
T ss_pred             cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcC-CCcEEEeecccc
Confidence            67899999999988888888765534589999999999999999999999 9999999999999966 589999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ..............+++.|+|||++.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~aPE~~~~  173 (283)
T cd07835         147 RAFGVPVRTYTHEVVTLWYRAPEILLG  173 (283)
T ss_pred             cccCCCccccCccccccCCCCCceeec
Confidence            754433222233456888999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.89  E-value=1.1e-22  Score=174.97  Aligned_cols=162  Identities=14%  Similarity=0.202  Sum_probs=123.6

Q ss_pred             ceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +|++.+.||+|+||.||+|..+        .+++.....     ...+..|+.+++.+.|        +|++++++.+. 
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~ni~~~~~~~~-   75 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH--------PNIIHLEGVVT-   75 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC--------cCcceEEEEEC-
Confidence            5999999999999999998763        345543322     2457789999999988        66888887665 


Q ss_pred             eccCCeEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         .....++||||+. ++|.+++... ...+++..+..++.|++.||.|||+. |++|+||||+||+++. +..++++|
T Consensus        76 ---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~-~~~~kl~d  149 (269)
T cd05065          76 ---KSRPVMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNS-NLVCKVSD  149 (269)
T ss_pred             ---CCCceEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcC-CCcEEECC
Confidence               6778999999994 5666665543 34589999999999999999999999 9999999999999954 47999999


Q ss_pred             ccchhHhhhCCCCC---CcccC--CCCccchhhhhh
Q psy16752        223 LNATELAATGHKLP---VSFCS--TAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~~~---~~~~g--t~~~~aPE~l~~  253 (284)
                      ||++..........   ....+  +..|++||.+.+
T Consensus       150 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (269)
T cd05065         150 FGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY  185 (269)
T ss_pred             CccccccccCccccccccccCCCcceeecCHhHhcc
Confidence            99887554332211   11112  346899998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.89  E-value=1.4e-22  Score=173.39  Aligned_cols=155  Identities=19%  Similarity=0.252  Sum_probs=116.9

Q ss_pred             EecccCceeEEEecce-------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         83 KLGWGHFSTVWFTGSK-------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .||+|+||.||+|.++       .++++....     .+.+.+|+.++++++|        ++++++++.+.     ...
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~ii~~~~~~~-----~~~   68 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN--------PYIVRMIGVCE-----AEA   68 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC--------CCeEEEEEEEc-----CCC
Confidence            4899999999998642       344443222     2447789999999988        66888887653     456


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      .++||||+ +++|.+.+.... ..+++..+..++.|++.||.|||.+ |++||||||+|||++. ++.++++|||++...
T Consensus        69 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~~  145 (257)
T cd05115          69 LMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVN-QHYAKISDFGLSKAL  145 (257)
T ss_pred             eEEEEEeCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcC-CCcEEeccCCccccc
Confidence            89999999 567766665433 3589999999999999999999999 9999999999999954 489999999998755


Q ss_pred             hhCCCCCC---cccCCCCccchhhhhh
Q psy16752        230 ATGHKLPV---SFCSTAPVQEYSELSR  253 (284)
Q Consensus       230 ~~~~~~~~---~~~gt~~~~aPE~l~~  253 (284)
                      ........   ...++..|+|||++.+
T Consensus       146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05115         146 GADDSYYKARSAGKWPLKWYAPECINF  172 (257)
T ss_pred             cCCccceeccCCCCCCcccCCHHHHcc
Confidence            43322111   1223567999998753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.89  E-value=1.3e-22  Score=174.66  Aligned_cols=156  Identities=15%  Similarity=0.169  Sum_probs=118.3

Q ss_pred             EecccCceeEEEecce-------eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         83 KLGWGHFSTVWFTGSK-------TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-------~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .||+|+||.||++...       ..++....     ....+.+|+.+++.++|        +|++++++.+.    ....
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h--------~~iv~~~~~~~----~~~~   69 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH--------PNILQCLGQCV----EAIP   69 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC--------cchhheEEEec----CCCc
Confidence            6899999999998641       12222111     23467888888988888        67999998766    6678


Q ss_pred             EEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .|+||||+ +++|.+++....  ...+++..+..++.||+.||.|||+. +++||||||+|||++. .+.++++|||++.
T Consensus        70 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~-~~~~~l~Dfg~~~  147 (268)
T cd05086          70 YLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTS-DLTVKVGDYGIGP  147 (268)
T ss_pred             cEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcC-CccEEeccccccc
Confidence            99999999 578888776542  12367778889999999999999999 9999999999999954 4889999999875


Q ss_pred             HhhhCC--CCCCcccCCCCccchhhhh
Q psy16752        228 LAATGH--KLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       228 ~~~~~~--~~~~~~~gt~~~~aPE~l~  252 (284)
                      ......  ......+++..|+|||++.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (268)
T cd05086         148 SRYKEDYIETEDDKCVPLRWLAPELVG  174 (268)
T ss_pred             ccCcchhhhcccCCcCcccccCchhcc
Confidence            432211  1223456888999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.89  E-value=1.1e-22  Score=180.36  Aligned_cols=161  Identities=18%  Similarity=0.223  Sum_probs=122.9

Q ss_pred             EEEEeccc--CceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         80 VTRKLGWG--HFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        80 i~~~LG~G--~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++++||+|  +|++||++..+     ++++.....      ...+.+|+.+++.++|        +||+++++.+.    
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------pniv~~~~~~~----   69 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH--------PNIVPYRATFI----   69 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC--------CCeeeEEEEEE----
Confidence            45789999  78999999874     244443221      2346678999999988        66999988876    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .....|+||||+ ++++.+++.......+++..++.++.|++.||.|||++ +|+||||||+|||++.+ +.+++.||+.
T Consensus        70 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~-~~~~l~~~~~  147 (327)
T cd08227          70 ADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVD-GKVYLSGLRS  147 (327)
T ss_pred             ECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecC-CcEEEcccch
Confidence            677899999999 56777777654444589999999999999999999999 99999999999999554 7899999986


Q ss_pred             hhHhhhCC-------CCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGH-------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~-------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.......       .......++.+|+|||++.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (327)
T cd08227         148 NLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQN  183 (327)
T ss_pred             hhccccccccccccccccccccceecccChHHhhcc
Confidence            44322111       112234578889999998754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.89  E-value=2.5e-22  Score=175.96  Aligned_cols=167  Identities=25%  Similarity=0.380  Sum_probs=127.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||+|.++     .+++....      ....+.+|+.+++.+.|        ++++++++.+....
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~~~~   84 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKH--------ENVVNLIEICRTKA   84 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCC--------CCccceEEEEeccc
Confidence            5999999999999999999763     23333211      12245679999999998        55777777544211


Q ss_pred             ----cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        146 ----VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       146 ----~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ......++||||+++++.+.+.... ..+++..+..++.||+.||.|||+. |++|+||||+||+++. .+.++|+
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~-~~~~kl~  161 (310)
T cd07865          85 TPYNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITK-DGILKLA  161 (310)
T ss_pred             ccccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECC-CCcEEEC
Confidence                1235679999999988888876543 3489999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCCC----CCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKL----PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~----~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.........    .....++..|+|||.+.+.
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  198 (310)
T cd07865         162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE  198 (310)
T ss_pred             cCCCcccccCCcccCCCCccCcccCccccCcHHhcCC
Confidence            99998765433221    1234678899999988553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.89  E-value=3.5e-22  Score=171.11  Aligned_cols=164  Identities=23%  Similarity=0.334  Sum_probs=130.7

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++.+.||.|+||+||+|...     .++++...     ....+.+|+.+++.++|        ++++++++.+.    
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----   69 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH--------PNVVKYYTSFV----   69 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC--------CCEEEEEEEEe----
Confidence            5999999999999999999752     23443221     23557789999999988        66888887665    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      .....|+|||++ ++++.+.+..... ..+++..+..++.|++.||.|||+. |++||||+|+||+++.+ +.++++|||
T Consensus        70 ~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~-~~~~l~df~  147 (267)
T cd06610          70 VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGED-GSVKIADFG  147 (267)
T ss_pred             eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCC-CCEEEcccc
Confidence            677899999999 6677777765432 3589999999999999999999999 99999999999999654 889999999


Q ss_pred             chhHhhhCCCC----CCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKL----PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~----~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++.........    .....|++.|++||++...
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  181 (267)
T cd06610         148 VSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQV  181 (267)
T ss_pred             hHHHhccCccccccccccccCChhhcChHHHccc
Confidence            98876654332    2355789999999998654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.89  E-value=1.4e-22  Score=172.62  Aligned_cols=164  Identities=22%  Similarity=0.330  Sum_probs=131.3

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEecCCC--ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQF--PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++|++.+.||.|+||.||+|..+.     +++.....  .+.+.+|+.+++.++|        ++++++++.+.    ..
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~--------~~i~~~~~~~~----~~   70 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDS--------PYIVKYYGSYF----KN   70 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCC--------CcEeeeeeeee----cC
Confidence            469999999999999999997632     33332221  4568889999999977        66899888776    67


Q ss_pred             eEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+++||+. ++|.+.+... ...+++..+..++.|++.||.|||.. +++|+||+|+||+++.+ +.++++|||++.
T Consensus        71 ~~~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~-~~~~l~dfg~~~  147 (256)
T cd06612          71 TDLWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEE-GQAKLADFGVSG  147 (256)
T ss_pred             CcEEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCC-CcEEEcccccch
Confidence            88999999995 5666665433 34589999999999999999999999 99999999999999654 789999999988


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .............++..|++||++.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~  174 (256)
T cd06612         148 QLTDTMAKRNTVIGTPFWMAPEVIQEI  174 (256)
T ss_pred             hcccCccccccccCCccccCHHHHhcC
Confidence            765543334455689999999998654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0669|consensus

Probab=99.89  E-value=2.6e-24  Score=176.18  Aligned_cols=171  Identities=26%  Similarity=0.397  Sum_probs=133.1

Q ss_pred             eeccceEEEEEecccCceeEEEecceeEEEe-----------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSKTQVLV-----------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~-----------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ...+.|.-+.+||+|.||+||+|+.+..-+.           ...+....++|+.+|..+.|        +|++.+++.+
T Consensus        14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkH--------env~nliEic   85 (376)
T KOG0669|consen   14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKH--------ENVVNLIEIC   85 (376)
T ss_pred             ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcc--------hhHHHHHHHH
Confidence            3345688899999999999999987542111           34467788999999999999        5566666654


Q ss_pred             eEecc----CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        142 KICGV----NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       142 ~~~~~----~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      .....    ....+|+||.+|..+|+..+.... .+++...+..++.++..||.|+|.. .|+|||+||+|+||+.+ +.
T Consensus        86 ~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~d-gi  162 (376)
T KOG0669|consen   86 RTKATPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKD-GI  162 (376)
T ss_pred             hhccCCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCC-ce
Confidence            43222    334599999999999998886543 3599999999999999999999999 99999999999999655 89


Q ss_pred             EEEEeccchhHhhhCCC--CCC--cccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHK--LPV--SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~--~~~--~~~gt~~~~aPE~l~~~  254 (284)
                      ++|+|||+++.+.....  .+.  ..+-|.+|..||.+-|.
T Consensus       163 lklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~  203 (376)
T KOG0669|consen  163 LKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD  203 (376)
T ss_pred             EEeeccccccceecccccCCCCcccceeeeecCCHHHhhcc
Confidence            99999999965543321  111  33569999999998764

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.89  E-value=2.3e-22  Score=173.99  Aligned_cols=161  Identities=22%  Similarity=0.249  Sum_probs=124.7

Q ss_pred             cceEEEEEecccCceeEEEecce---------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ++|++.+.||+|+||+||+|.++         .+++.....     ...+.+|+.+++.+.|        +|++++++.+
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~   78 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH--------PHVVRLLGIC   78 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC--------CCcceEEEEE
Confidence            57999999999999999998752         233333222     2356779999999987        6688888866


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    . ...++||||+ +++|.+.+.... ..+++..+..++.||+.||.|||+. +++||||||+||+++. .+.++|
T Consensus        79 ~----~-~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~-~~~~kL  150 (279)
T cd05057          79 L----S-SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKT-PQHVKI  150 (279)
T ss_pred             e----c-CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcC-CCeEEE
Confidence            4    3 6789999999 678887776543 3489999999999999999999999 9999999999999954 478999


Q ss_pred             EeccchhHhhhCCCCCC--cccCCCCccchhhhh
Q psy16752        221 LALNATELAATGHKLPV--SFCSTAPVQEYSELS  252 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~--~~~gt~~~~aPE~l~  252 (284)
                      +|||.+...........  ...++..|+|||.+.
T Consensus       151 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05057         151 TDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL  184 (279)
T ss_pred             CCCcccccccCcccceecCCCcccccccCHHHhh
Confidence            99999876553322111  222356799999764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.89  E-value=1.8e-22  Score=174.59  Aligned_cols=164  Identities=16%  Similarity=0.211  Sum_probs=124.8

Q ss_pred             cceEEEEEecccCceeEEEeccee----------EEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT----------QVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~----------~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|++.+.||+|+||.||+|.+..          +++.....     ...+..|+.+++.++|        ++++++++.
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~   77 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH--------QNIVRLIGV   77 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC--------CCEeeEEEE
Confidence            469999999999999999997632          33333222     2347789999999988        668888886


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-----RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      +.    .....++||||+ +++|.+++.....     ..+++..+..++.||+.||.|||+. +++||||||+||+++.+
T Consensus        78 ~~----~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~nil~~~~  152 (277)
T cd05036          78 SF----ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCK  152 (277)
T ss_pred             Ec----cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchheEEEecc
Confidence            65    566789999999 7788887765431     2488999999999999999999999 99999999999999654


Q ss_pred             C--CcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhh
Q psy16752        215 E--ARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELS  252 (284)
Q Consensus       215 ~--~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~  252 (284)
                      +  ..++++|||++.........  ......+..|+|||++.
T Consensus       153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05036         153 GPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFL  194 (277)
T ss_pred             CCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHh
Confidence            2  46999999998765322111  11222356799999874

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.89  E-value=2.1e-22  Score=178.78  Aligned_cols=166  Identities=22%  Similarity=0.335  Sum_probs=127.9

Q ss_pred             ceEEEEEecccCceeEEEecce-------eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-------TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-------~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +|++.+.||+|+||.||++.+.       .+++....      ..+.+.+|+.+++.+.+       |++|+++++....
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~-------h~~iv~~~~~~~~   73 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG-------HKNITCLYDMDIV   73 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcC-------CCChheeeeeeee
Confidence            4899999999999999999863       23443221      13456789999998852       2678888875442


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      .......+|++|+|++++|.+.+....  .+++..++.++.||+.||.|||.. ||+||||||+|||++. ++.++|+||
T Consensus        74 ~~~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~-~~~~kl~Df  149 (332)
T cd07857          74 FPGNFNELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNA-DCELKICDF  149 (332)
T ss_pred             ccccCCcEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcC-CCCEEeCcC
Confidence            223446689999999999988886543  589999999999999999999999 9999999999999955 488999999


Q ss_pred             cchhHhhhCCC----CCCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHK----LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~  253 (284)
                      |++........    ......||+.|+|||++.+
T Consensus       150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  183 (332)
T cd07857         150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLS  183 (332)
T ss_pred             CCceecccccccccccccCcccCccccCcHHHhC
Confidence            99875543221    1224578999999998754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.89  E-value=1.9e-22  Score=173.40  Aligned_cols=160  Identities=23%  Similarity=0.310  Sum_probs=125.3

Q ss_pred             EEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         80 VTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        80 i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      ....||+|+||.||+|.++     .+++....    ..+.+.+|+.+++.++|        ++++++++.+.    ....
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~----~~~~   79 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH--------RNIVQYLGSDS----ENGF   79 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC--------CCeeeeeeeec----cCCE
Confidence            3468999999999999753     23443222    23457789999999988        66899888766    6788


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGI--PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~--~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .++||||+ +++|.+.+.... ..+  ++..+..++.||+.||.|||.. ||+||||||+||+++.+.+.++|+|||.+.
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~~~~l~dfg~~~  157 (268)
T cd06624          80 FKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSGVVKISDFGTSK  157 (268)
T ss_pred             EEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence            99999999 567777766532 234  8888999999999999999999 999999999999997666899999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      .............+++.|+|||.+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~aPE~~~~  183 (268)
T cd06624         158 RLAGINPCTETFTGTLQYMAPEVIDK  183 (268)
T ss_pred             ecccCCCccccCCCCccccChhhhcc
Confidence            65443333334568999999998754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.89  E-value=3.2e-22  Score=175.37  Aligned_cols=168  Identities=26%  Similarity=0.312  Sum_probs=128.8

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++.+.||.|+||.||+|.++     .+++...      .....+.+|+.+++.++|        ++|+++++.+..
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~~   78 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKH--------PNVVPLIDMAVE   78 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCC--------CCccchhhheec
Confidence            457999999999999999999863     2333221      123356789999999998        558887776532


Q ss_pred             ec----cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        144 CG----VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       144 ~~----~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      ..    .....+++||||+.+++...+.... ..+++..+..++.||+.||.|||++ ||+|+||||+||+++. .+.++
T Consensus        79 ~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~-~~~~~  155 (311)
T cd07866          79 RPDKSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDN-QGILK  155 (311)
T ss_pred             ccccccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECC-CCCEE
Confidence            11    1345789999999888888776543 3599999999999999999999999 9999999999999954 48999


Q ss_pred             EEeccchhHhhhCCCC-----------CCcccCCCCccchhhhhh
Q psy16752        220 TLALNATELAATGHKL-----------PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~-----------~~~~~gt~~~~aPE~l~~  253 (284)
                      ++|||++.........           .....+++.|+|||.+.+
T Consensus       156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (311)
T cd07866         156 IADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG  200 (311)
T ss_pred             ECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC
Confidence            9999998755432211           113357888999998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.89  E-value=1e-22  Score=192.07  Aligned_cols=168  Identities=21%  Similarity=0.289  Sum_probs=112.3

Q ss_pred             cceEEEEEecccCceeEEEecce---------eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE-e-
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI-C-  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~-~-  144 (284)
                      ++|.+.+.||+|+||.||+|.+.         .++|...   .....|..+...+.+...     ..+..++..+.. . 
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~---~~~~~e~~~~e~l~~~~~-----~~~~~~~~~~~~~~~  203 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKAT---EYGAVEIWMNERVRRACP-----NSCADFVYGFLEPVS  203 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEec---ccchhHHHHHHHHHhhch-----hhHHHHHHhhhcccc
Confidence            57999999999999999999763         2333222   122233333333333110     111112111110 0 


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCC------------------CCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCC
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYR------------------GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK  205 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~------------------~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiK  205 (284)
                      ......+++||||+ +++|.+++......                  ......+..++.||+.||.|||++ +|||||||
T Consensus       204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~-gIiHRDLK  282 (566)
T PLN03225        204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST-GIVHRDVK  282 (566)
T ss_pred             cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC-CEEeCcCC
Confidence            13567899999999 56677776543210                  012345678999999999999999 99999999


Q ss_pred             CCCeeEeeCCCcEEEEeccchhHhhhCC-CCCCcccCCCCccchhhhh
Q psy16752        206 PENVLLCVDEARVKTLALNATELAATGH-KLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       206 p~NIll~~~~~~v~l~Dfg~a~~~~~~~-~~~~~~~gt~~~~aPE~l~  252 (284)
                      |+|||++.+.+.++|+|||+|.....+. ..+..+++++.|+|||.+.
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~  330 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYI  330 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhh
Confidence            9999997666899999999997554332 2344678999999999764

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.89  E-value=1.9e-22  Score=179.99  Aligned_cols=163  Identities=25%  Similarity=0.393  Sum_probs=126.8

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++.+.||+|+||.||+|.+.     ++++....      ....+.+|+.+++.+.|        ++|+++++.+..
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~~   85 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKH--------ENVIGLLDVFTP   85 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCC--------CCccceeeeecC
Confidence            457999999999999999999752     34444321      12346789999999988        668888877652


Q ss_pred             ecc--CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ...  ....+|+||+|+++++...+...   .+++..+..++.||+.||.|||.. ||+||||||+||+++. .+.++++
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~-~~~~kl~  160 (343)
T cd07880          86 DLSLDRFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNE-DCELKIL  160 (343)
T ss_pred             CccccccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcC-CCCEEEe
Confidence            111  12357999999988887776543   489999999999999999999999 9999999999999955 4789999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.+......   .....+++.|+|||++.+
T Consensus       161 dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  189 (343)
T cd07880         161 DFGLARQTDSE---MTGYVVTRWYRAPEVILN  189 (343)
T ss_pred             ecccccccccC---ccccccCCcccCHHHHhC
Confidence            99988754322   224567889999998764

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.89  E-value=1.4e-22  Score=176.86  Aligned_cols=162  Identities=22%  Similarity=0.361  Sum_probs=129.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|.+.+.||+|+||.||++.+.     .+++....    ..+.+..|+.+++.+.|        ++++++++.+.    
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--------p~i~~~~~~~~----   86 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH--------PNIVNYLDSYL----   86 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC--------CCeeehhheee----
Confidence            47999999999999999999642     23443221    22456778889998887        66888888776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .....|+|+||+ ++++.+.+...   .+++..+..++.|++.||.|||+. |++||||+|+||+++. ++.++|+|||+
T Consensus        87 ~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~-~~~~kL~dfg~  161 (293)
T cd06647          87 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGM-DGSVKLTDFGF  161 (293)
T ss_pred             eCCcEEEEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcC-CCCEEEccCcc
Confidence            567899999999 66777776543   378999999999999999999999 9999999999999954 48999999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|++||.+.+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  190 (293)
T cd06647         162 CAQITPEQSKRSTMVGTPYWMAPEVVTRK  190 (293)
T ss_pred             eecccccccccccccCChhhcCchhhccC
Confidence            87655544444456789999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.89  E-value=1.8e-22  Score=176.98  Aligned_cols=162  Identities=19%  Similarity=0.223  Sum_probs=123.9

Q ss_pred             cceEEEEEecccCceeEEEecce---------eEEEecCCCC-----hhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQFP-----ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~~-----~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ++|++.+.||+|+||.||+|.+.         .+++......     ..+.+|+.+++.+.|        +|++++++.+
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h--------~niv~~~~~~   78 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH--------PHLVRLLGVC   78 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC--------CCcccEEEEE
Confidence            46899999999999999999752         2333332221     246778899999888        6688888865


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .     ....+++++|+ +|++.+.+.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++. .+.++|
T Consensus        79 ~-----~~~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~-~~~~kL  150 (303)
T cd05110          79 L-----SPTIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKS-PNHVKI  150 (303)
T ss_pred             c-----CCCceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecC-CCceEE
Confidence            4     23467899999 678888776543 3488999999999999999999999 9999999999999954 478999


Q ss_pred             EeccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        221 LALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      +|||++.........  .....++..|++||++.+
T Consensus       151 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (303)
T cd05110         151 TDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY  185 (303)
T ss_pred             ccccccccccCcccccccCCCccccccCCHHHhcc
Confidence            999998765433222  123345678999998754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.89  E-value=1.9e-22  Score=174.74  Aligned_cols=165  Identities=18%  Similarity=0.219  Sum_probs=125.4

Q ss_pred             cceEEEEEecccCceeEEEecc----------eeEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+|++.++||+|+||.||++..          ..+++.....    ...+.+|+.+++.+.|        ++|+++++.+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~   76 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH--------QHIVRFYGVC   76 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC--------CCCceEEEEE
Confidence            4689999999999999999853          1233332221    3457889999999988        6688888766


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCC-------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-------------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                      .    .....+++|||+ +++|.+++.....             ..+++..+..++.||+.||.|||+. |++||||||+
T Consensus        77 ~----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~  151 (280)
T cd05092          77 T----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATR  151 (280)
T ss_pred             e----cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-CeecccccHh
Confidence            5    667899999999 6778777765421             2478999999999999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++. .+.++|+|||++........  ......+++.|+|||.+.+.
T Consensus       152 nil~~~-~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  199 (280)
T cd05092         152 NCLVGQ-GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR  199 (280)
T ss_pred             hEEEcC-CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccC
Confidence            999954 58999999998864432211  11233456789999977543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1e-22  Score=175.56  Aligned_cols=161  Identities=24%  Similarity=0.337  Sum_probs=130.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++.+.||.|+||.||+|.+.     .+++....     ....+.+|+.+++.+.|        ++++++++.+.    
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----   69 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS--------PYITKYYGSFL----   69 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC--------CCeeeeeEEEE----
Confidence            6899999999999999999763     23333221     12356789999999988        66888888765    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+|+||+ +++|.+.+...   .+++..+..++.|++.||.|||+. +++|+||+|+||+++. .+.++++|||+
T Consensus        70 ~~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~-~~~~~l~d~g~  144 (274)
T cd06609          70 KGSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSE-EGDVKLADFGV  144 (274)
T ss_pred             ECCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECC-CCCEEEccccc
Confidence            668899999999 66777776654   489999999999999999999999 9999999999999955 48999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............+++.|++||.+.+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  173 (274)
T cd06609         145 SGQLTSTMSKRNTFVGTPFWMAPEVIKQS  173 (274)
T ss_pred             ceeecccccccccccCCccccChhhhccC
Confidence            87665543344456789999999988654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.88  E-value=2e-22  Score=176.13  Aligned_cols=170  Identities=24%  Similarity=0.372  Sum_probs=130.0

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ...++|++.+.||.|+||.||+|.++     .+++...      .....+.+|+.+++.++|        ++++++++.+
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h--------~~i~~~~~~~   75 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNH--------RNIVNLKEIV   75 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCC--------CCeeeeehee
Confidence            34467999999999999999999873     2333321      122456789999999988        6688887766


Q ss_pred             eEec------cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        142 KICG------VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       142 ~~~~------~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      ....      .....+|+||||+++++...+.... ..+++..+..++.||+.||.|||+. ||+|+||+|+||+++. .
T Consensus        76 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~-~  152 (302)
T cd07864          76 TDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILLNN-K  152 (302)
T ss_pred             cCcchhhhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECC-C
Confidence            4211      1234899999999888888776543 3589999999999999999999999 9999999999999954 5


Q ss_pred             CcEEEEeccchhHhhhCCCCC-CcccCCCCccchhhhhh
Q psy16752        216 ARVKTLALNATELAATGHKLP-VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~~~-~~~~gt~~~~aPE~l~~  253 (284)
                      +.++|+|||++.......... ....+++.|++||.+.+
T Consensus       153 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  191 (302)
T cd07864         153 GQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLG  191 (302)
T ss_pred             CcEEeCcccccccccCCcccccccceeccCccChHHhcC
Confidence            899999999987655433222 23356788999998854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.88  E-value=2.1e-22  Score=171.50  Aligned_cols=157  Identities=17%  Similarity=0.283  Sum_probs=118.3

Q ss_pred             EEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      +.||+|+||.||+|.++     .+++.....     ...+.+|+.+++.+.|        ++|+++++.+.    .....
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~~~~   68 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH--------PNIVRLIGVCT----QKQPI   68 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC--------CCcceEEEEEc----CCCCe
Confidence            36899999999999763     344432221     2457889999999988        66898888765    66789


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |+||||+ +++|.+.+.... ..+++..+..++.|++.||.|||+. ||+||||||+||+++. ++.++++|||.+....
T Consensus        69 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~~~  145 (252)
T cd05084          69 YIVMELVQGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTE-KNVLKISDFGMSREEE  145 (252)
T ss_pred             EEEEeeccCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcC-CCcEEECccccCcccc
Confidence            9999999 667777665433 3589999999999999999999999 9999999999999954 4789999999987543


Q ss_pred             hCCCCC--CcccCCCCccchhhhhh
Q psy16752        231 TGHKLP--VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       231 ~~~~~~--~~~~gt~~~~aPE~l~~  253 (284)
                      ......  .....+..|+|||.+.+
T Consensus       146 ~~~~~~~~~~~~~~~~y~aPE~~~~  170 (252)
T cd05084         146 DGVYASTGGMKQIPVKWTAPEALNY  170 (252)
T ss_pred             cccccccCCCCCCceeecCchhhcC
Confidence            221111  01122356999998644

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.88  E-value=4.9e-22  Score=172.93  Aligned_cols=169  Identities=21%  Similarity=0.286  Sum_probs=129.4

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEec
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .++|.+...||+|+||.||+|...     .++++...   ....+.+|+.++.++ .|        +|++++++.+....
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h--------~ni~~~~~~~~~~~   92 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH--------PNVVKFYGMFYKAD   92 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCC--------CCeEEEEEEEEecc
Confidence            357999999999999999998762     24444332   234567788888888 45        67888888765222


Q ss_pred             c-CCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        146 V-NGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       146 ~-~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      . .....|+||||+ +++|.+.+...  ....+++..+..++.|++.||.|||.. +++||||||+||+++. .+.++++
T Consensus        93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~-~~~~kl~  170 (291)
T cd06639          93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTT-EGGVKLV  170 (291)
T ss_pred             ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcC-CCCEEEe
Confidence            1 235789999999 66777766432  223589999999999999999999999 9999999999999955 4789999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++..............|++.|+|||++..
T Consensus       171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  202 (291)
T cd06639         171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIAC  202 (291)
T ss_pred             ecccchhcccccccccCccCCccccChhhhcC
Confidence            99998766544333345678999999998743

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.88  E-value=1.2e-22  Score=180.38  Aligned_cols=163  Identities=21%  Similarity=0.309  Sum_probs=127.4

Q ss_pred             ccceEE-EEEecccCceeEEEecce-----eEEEecCCC------------------ChhhHHHHHHHHhhhcCCCCCcc
Q psy16752         75 NNRYRV-TRKLGWGHFSTVWFTGSK-----TQVLVSPQF------------------PETALDEIKLLKCVRDGDVNDPY  130 (284)
Q Consensus        75 ~~~y~i-~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------------------~~~~~~E~~~l~~l~~~~~~~~~  130 (284)
                      .++|.. .+.||.|+||+||+|.++     .+++.....                  ...+.+|+.+++.++|       
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-------   79 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH-------   79 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC-------
Confidence            356864 577999999999999763     234432111                  1146789999999988       


Q ss_pred             cchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCee
Q psy16752        131 RERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL  210 (284)
Q Consensus       131 ~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIl  210 (284)
                       ++++++++.+.    ...+.|+||||+.+++.+.+....  .+++..+..++.||+.||.|||+. ||+|+||+|+||+
T Consensus        80 -~~iv~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~dl~~~nil  151 (335)
T PTZ00024         80 -ENIMGLVDVYV----EGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKW-YFMHRDLSPANIF  151 (335)
T ss_pred             -cceeeeeEEEe----cCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHeE
Confidence             66898888776    678999999999989988886543  489999999999999999999999 9999999999999


Q ss_pred             EeeCCCcEEEEeccchhHhh--------------hCCCCCCcccCCCCccchhhhhh
Q psy16752        211 LCVDEARVKTLALNATELAA--------------TGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       211 l~~~~~~v~l~Dfg~a~~~~--------------~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++. .+.++++|||.+....              ..........+++.|+|||.+.+
T Consensus       152 l~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  207 (335)
T PTZ00024        152 INS-KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG  207 (335)
T ss_pred             ECC-CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc
Confidence            954 4799999999887554              11111223457889999998864

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.88  E-value=1.4e-22  Score=177.30  Aligned_cols=159  Identities=23%  Similarity=0.342  Sum_probs=124.9

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      |.....||+|+||.||+|.+.     .+++...    ...+.+.+|+.++..+.|        ++++++++.+.    ..
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--------p~i~~~~~~~~----~~   90 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH--------QNVVEMYKSYL----VG   90 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC--------Cchhhhhhhee----eC
Confidence            555668999999999999762     2343321    223456788899998888        66899888776    67


Q ss_pred             eEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...|+||||+. +++...+.. .  .+++..+..++.|++.||.|||+. +++||||+|+||+++.+ +.++|+|||++.
T Consensus        91 ~~~~iv~e~~~~~~L~~~~~~-~--~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~-~~~kL~dfg~~~  165 (297)
T cd06659          91 EELWVLMEFLQGGALTDIVSQ-T--RLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLD-GRVKLSDFGFCA  165 (297)
T ss_pred             CeEEEEEecCCCCCHHHHHhh-c--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccC-CcEEEeechhHh
Confidence            88999999994 555554433 2  489999999999999999999999 99999999999999554 899999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      .............|++.|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~  191 (297)
T cd06659         166 QISKDVPKRKSLVGTPYWMAPEVISR  191 (297)
T ss_pred             hcccccccccceecCccccCHHHHcc
Confidence            65444333345679999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.88  E-value=6.9e-23  Score=178.79  Aligned_cols=160  Identities=23%  Similarity=0.317  Sum_probs=125.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .|.....||+|+||.||++.+.     .+++....    ..+.+.+|+.+++.+.|        ++++++++.+.    .
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~ii~~~~~~~----~   90 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH--------ENVVDMYNSYL----V   90 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC--------CcHHHHHHhee----c
Confidence            4666788999999999999752     23433221    12356789999998887        66999888776    6


Q ss_pred             CeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ..+.|+||||+.+ ++.+.+.. .  .+++..+..++.||+.||.|||++ +|+||||||+||+++.+ +.++|+|||++
T Consensus        91 ~~~~~lv~e~~~~~~L~~~~~~-~--~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~-~~~kL~dfg~~  165 (292)
T cd06658          91 GDELWVVMEFLEGGALTDIVTH-T--RMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSD-GRIKLSDFGFC  165 (292)
T ss_pred             CCeEEEEEeCCCCCcHHHHHhc-C--CCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCC-CCEEEccCcch
Confidence            7889999999954 55554433 2  489999999999999999999999 99999999999999554 89999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ..............|++.|+|||.+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  192 (292)
T cd06658         166 AQVSKEVPKRKSLVGTPYWMAPEVISR  192 (292)
T ss_pred             hhcccccccCceeecCccccCHHHHcc
Confidence            765544333445678999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.88  E-value=1.9e-22  Score=172.03  Aligned_cols=160  Identities=16%  Similarity=0.257  Sum_probs=123.5

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .+|++.+.||+|+||.||++...   .+++....  ....+.+|+.+++.++|        ++++++++.+.     ...
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~-----~~~   72 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHH--------KNLVRLLGVIL-----HNG   72 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCC--------CCcCeEEEEEc-----CCC
Confidence            46999999999999999998753   23333322  23467889999999988        66888887653     334


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      .++||||+ +++|.+.+.......+++..+..++.|++.||.|||+. |++||||||+||+++.+ +.++++|||++...
T Consensus        73 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~-~~~kl~Dfg~~~~~  150 (254)
T cd05083          73 LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSED-GVAKVSDFGLARVG  150 (254)
T ss_pred             cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCC-CcEEECCCccceec
Confidence            79999999 67888888765544589999999999999999999999 99999999999999554 79999999987654


Q ss_pred             hhCCCCCCcccCCCCccchhhhhh
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ...   ......+..|+|||.+.+
T Consensus       151 ~~~---~~~~~~~~~y~~pe~~~~  171 (254)
T cd05083         151 SMG---VDNSKLPVKWTAPEALKH  171 (254)
T ss_pred             ccc---CCCCCCCceecCHHHhcc
Confidence            322   112234566888987653

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.88  E-value=8e-23  Score=177.10  Aligned_cols=163  Identities=17%  Similarity=0.186  Sum_probs=124.4

Q ss_pred             ceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      +|++.+.||.|+||.||+|.+.          .++|.....     ...+.+|+.++..+.|        ++|+++++.+
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h--------~~iv~~~~~~   77 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH--------PNIVCLLGVV   77 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC--------CCcCeEEEEE
Confidence            5888899999999999999642          244443322     1346678888888887        6699988876


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCC
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP  206 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp  206 (284)
                      .    .....++++||+ +++|.+++....              ...+++..+..++.|++.||.|||+. ||+||||||
T Consensus        78 ~----~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi~H~dlkp  152 (283)
T cd05091          78 T----KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HVVHKDLAT  152 (283)
T ss_pred             c----CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-Cccccccch
Confidence            5    667799999999 567777764321              12478888999999999999999999 999999999


Q ss_pred             CCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        207 ENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       207 ~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      +||+++. .+.++++|||++........  ......+++.|+|||++.+
T Consensus       153 ~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05091         153 RNVLVFD-KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY  200 (283)
T ss_pred             hheEecC-CCceEecccccccccccchheeeccCccCCccccCHHHHhc
Confidence            9999954 47899999998875543321  1223456788999998854

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.88  E-value=2.2e-22  Score=174.01  Aligned_cols=160  Identities=24%  Similarity=0.347  Sum_probs=125.9

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      |++.+.||.|+||.||+|.+.     .+++.....     ...+.+|+.+++.+.|        ++++++++.+.    .
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~----~   73 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--------PYVTKYYGSYL----K   73 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC--------CCEeEEEEEEE----e
Confidence            888999999999999999752     244443221     2356778999999888        66999888776    7


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....|+||||+ ++++.+.+...   .+++..+..++.|++.||.|||+. |++|+||+|+||+++. .+.++++|||++
T Consensus        74 ~~~~~lv~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~-~~~~~l~dfg~~  148 (277)
T cd06641          74 DTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSE-HGEVKLADFGVA  148 (277)
T ss_pred             CCeEEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECC-CCCEEEeecccc
Confidence            78899999999 55666665432   489999999999999999999999 9999999999999954 488999999987


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..............++..|++||.+.+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~  176 (277)
T cd06641         149 GQLTDTQIKRNTFVGTPFWMAPEVIKQS  176 (277)
T ss_pred             eecccchhhhccccCCccccChhhhccC
Confidence            6554332223345688899999987543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.5e-22  Score=174.70  Aligned_cols=163  Identities=20%  Similarity=0.317  Sum_probs=129.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .|++.+.||.|+||.||+|.+.     .+++...     .....+.+|+.+++.+.+.     .|++++++++.+.    
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~-----~~~~vi~~~~~~~----   72 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQS-----QPPNITKYYGSYL----   72 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccC-----CCCCeeeEeeeee----
Confidence            3888899999999999999862     2444322     1234577899999998731     1377888888766    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .....|+||||+ +++|.+.+...   .+++..+..++.|++.||.|||+. ||+|+||+|+||+++. .+.++++|||.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~-~~~~~l~dfg~  147 (277)
T cd06917          73 KGPRLWIIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTN-TGNVKLCDFGV  147 (277)
T ss_pred             eCCEEEEEEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcC-CCCEEEccCCc
Confidence            677899999999 56676665432   489999999999999999999999 9999999999999965 58999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +..............|++.|+|||.+.+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (277)
T cd06917         148 AALLNQNSSKRSTFVGTPYWMAPEVITE  175 (277)
T ss_pred             eeecCCCccccccccCCcceeCHHHhcc
Confidence            8776655444455679999999998864

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.88  E-value=2.9e-22  Score=171.94  Aligned_cols=163  Identities=25%  Similarity=0.269  Sum_probs=124.6

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|++.+.||+|+||.||.+.+.     .+++....         ....+.+|+.+++.+.|        ++++++++.+.
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~   74 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH--------ERIVQYYGCLR   74 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC--------CCeeeEEeEec
Confidence            5999999999999999999752     23443211         11356779999999988        66888877653


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                        ......+++||||+ +++|.+.+....  .+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.++|+
T Consensus        75 --~~~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~-~~~~~l~  148 (265)
T cd06652          75 --DPMERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDS-VGNVKLG  148 (265)
T ss_pred             --cCCCceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecC-CCCEEEC
Confidence              11245788999999 567777765543  488999999999999999999999 9999999999999954 5899999


Q ss_pred             eccchhHhhhCC---CCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGH---KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~---~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.+.......   .......++..|+|||++.+
T Consensus       149 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  183 (265)
T cd06652         149 DFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISG  183 (265)
T ss_pred             cCccccccccccccccccccCCCCccccChhhhcC
Confidence            999887543221   11224568899999998854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG1151|consensus

Probab=99.88  E-value=9.8e-24  Score=184.68  Aligned_cols=168  Identities=27%  Similarity=0.372  Sum_probs=136.0

Q ss_pred             eeccceEEEEEecccCceeEEEecc----ee-EEEe-----------cCCCChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGS----KT-QVLV-----------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~----~~-~~~~-----------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      .+.++|-++.+||+|||+.||+|.+    ++ ++++           ...+.+.+.+|.++-+.|.|        +.||+
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDH--------pRIVK  531 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDH--------PRIVK  531 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCc--------ceeee
Confidence            3456899999999999999999987    22 3333           12223556788999999998        56999


Q ss_pred             ccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcEecCCCCCCeeEeeC-
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC-RIIHTDIKPENVLLCVD-  214 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-givHrDiKp~NIll~~~-  214 (284)
                      +|++|..   +.+.+|-|+|||.|+.++++.+.. +.+++..++.|+.||+.||.||...- .|||-||||.|||+... 
T Consensus       532 lYDyfsl---DtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt  607 (775)
T KOG1151|consen  532 LYDYFSL---DTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT  607 (775)
T ss_pred             eeeeeee---ccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc
Confidence            9998864   777899999999888888887765 35999999999999999999998753 79999999999999554 


Q ss_pred             -CCcEEEEeccchhHhhhCC-------CCCCcccCCCCccchhhhh
Q psy16752        215 -EARVKTLALNATELAATGH-------KLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       215 -~~~v~l~Dfg~a~~~~~~~-------~~~~~~~gt~~~~aPE~l~  252 (284)
                       .+.++|.|||++++.....       ..++...||.+|..||.+.
T Consensus       608 acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  608 ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceee
Confidence             3699999999999765443       3345678999999999873

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.88  E-value=1.7e-22  Score=174.67  Aligned_cols=161  Identities=22%  Similarity=0.336  Sum_probs=128.3

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .|+.++.||.|+||.||+|.+..     ++++....     ...+..|+.+++.+.|        ++++++++.+.    
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----   72 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--------PYVTKYYGSYL----   72 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEE----
Confidence            58899999999999999997632     44433221     2356778899998887        66899988776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .....|+||||+ +++|.+.+...   .+++..+..++.|++.||.|||+. +++|+||+|+||+++. .+.++++|||+
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~-~~~~~l~dfg~  147 (277)
T cd06640          73 KGTKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSE-QGDVKLADFGV  147 (277)
T ss_pred             ECCEEEEEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcC-CCCEEEccccc
Confidence            678899999999 66777766543   489999999999999999999999 9999999999999954 47899999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............++..|+|||++.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~  176 (277)
T cd06640         148 AGQLTDTQIKRNTFVGTPFWMAPEVIQQS  176 (277)
T ss_pred             ceeccCCccccccccCcccccCHhHhccC
Confidence            87655443333345688899999987543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.88  E-value=2.8e-22  Score=172.07  Aligned_cols=162  Identities=25%  Similarity=0.339  Sum_probs=125.8

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-------------ChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------------PETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +|.+...||.|+||.||+|.+.     .+++.....             .+.+.+|+.+++.+.|        +++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~   72 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH--------ENIVQYL   72 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC--------CCeeeEE
Confidence            3778889999999999999752     233322111             1356788999999988        6689988


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+.    ...+.++||||+ +++|.+.+...  ..+++..+..++.|++.||.|||+. |++||||+|+||+++ +.+.
T Consensus        73 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~~-~~~~  144 (267)
T cd06628          73 GSSL----DADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILVD-NKGG  144 (267)
T ss_pred             EEEE----eCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEEc-CCCC
Confidence            8766    677899999999 55777776554  3589999999999999999999999 999999999999995 4589


Q ss_pred             EEEEeccchhHhhhCCC------CCCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHK------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++++|||.+........      ......|+..|+|||.+.+.
T Consensus       145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  187 (267)
T cd06628         145 IKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT  187 (267)
T ss_pred             EEecccCCCcccccccccCCccccccccCCCcCccChhHhccC
Confidence            99999998876653211      11235688999999987553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.88  E-value=4.6e-22  Score=170.60  Aligned_cols=161  Identities=22%  Similarity=0.306  Sum_probs=125.9

Q ss_pred             ceEEEEEecccCceeEEEecce----eEEEecCCC----------ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF----------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|++.+.||.|+||.||+|...    .+++.....          ...+.+|+.+++.++|        ++++++++.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~   72 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH--------VNIVQYLGTCL   72 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC--------CCEeeEeeEee
Confidence            3788899999999999998652    234432211          1346779999999988        66888888776


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +++|.+.+.+..  .+++..+..++.|++.||.|||.. +|+|+||+|+||+++ +.+.++++
T Consensus        73 ----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~-~~~~~~l~  144 (265)
T cd06631          73 ----DDNTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLM-PNGIIKLI  144 (265)
T ss_pred             ----cCCeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEEC-CCCeEEec
Confidence                678999999999 667777775543  489999999999999999999999 999999999999995 45899999


Q ss_pred             eccchhHhhhCC------CCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGH------KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~------~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.+.......      .......++..|+|||++.+
T Consensus       145 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  182 (265)
T cd06631         145 DFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE  182 (265)
T ss_pred             cchhhHhhhhccccccccccccccCCCccccChhhhcC
Confidence            999887653211      11224568999999998754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.88  E-value=9.5e-23  Score=176.19  Aligned_cols=161  Identities=24%  Similarity=0.352  Sum_probs=127.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .|++.+.||.|+||.||+|.+.     .+++.....     ...+..|+.+++.+.|        ++++++++.+.    
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----   72 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--------PYITRYYGSYL----   72 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC--------CccHhhhcccc----
Confidence            4777889999999999999762     244443211     2356789999999887        66999998776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .....|+||||+ ++++.+.+..   ..+++..+..++.|++.||.|||+. |++|+||+|+||+++. ++.++++|||+
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~-~~~~~l~dfg~  147 (277)
T cd06642          73 KGTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSE-QGDVKLADFGV  147 (277)
T ss_pred             cCCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeC-CCCEEEccccc
Confidence            677899999999 5566666543   2489999999999999999999999 9999999999999954 58999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............++..|+|||.+.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (277)
T cd06642         148 AGQLTDTQIKRNTFVGTPFWMAPEVIKQS  176 (277)
T ss_pred             cccccCcchhhhcccCcccccCHHHhCcC
Confidence            87655433333345688999999988654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.88  E-value=3.6e-22  Score=171.60  Aligned_cols=163  Identities=13%  Similarity=0.152  Sum_probs=123.3

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .+|+..+.||+|+||.||+|..+        .+++.....     .+.+..|+.+++.++|        ++++++++.+.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~   76 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH--------HNIIRLEGVVT   76 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC--------CCeeEEEEEEc
Confidence            46899999999999999999753        234433222     2346778899998887        66888888765


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          .....|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||+. |++||||||+||+++. ++.++++
T Consensus        77 ----~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~-~~~~kl~  149 (268)
T cd05063          77 ----KFKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNS-NLECKVS  149 (268)
T ss_pred             ----cCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcC-CCcEEEC
Confidence                667899999999 556666665433 4589999999999999999999999 9999999999999954 5899999


Q ss_pred             eccchhHhhhCCCCCC-c--ccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPV-S--FCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~-~--~~gt~~~~aPE~l~~  253 (284)
                      |||++........... .  ...+..|+|||++.+
T Consensus       150 dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  184 (268)
T cd05063         150 DFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY  184 (268)
T ss_pred             CCccceecccccccceeccCCCcCceecCHHHhhc
Confidence            9998875543222111 1  122446999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.88  E-value=6.2e-22  Score=169.11  Aligned_cols=166  Identities=22%  Similarity=0.311  Sum_probs=129.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||.|+||.||+|.+.     .+++....      ..+.+..|+.+++.++|        ++++++++.+.  .
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~--~   70 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKH--------PNIVRYYDRII--D   70 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCC--------Cccceeeeeee--c
Confidence            4899999999999999999763     23333221      12346678999999988        66888877543  2


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHh-----hCCCcEecCCCCCCeeEeeCCCc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLH-----TKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH-----~~~givHrDiKp~NIll~~~~~~  217 (284)
                      .....+|++|||+ +++|.+.+....  ...+++..+..++.||+.||.|||     +. +++|+||+|+||+++. .+.
T Consensus        71 ~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili~~-~~~  148 (265)
T cd08217          71 RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFLDA-NNN  148 (265)
T ss_pred             CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEEec-CCC
Confidence            2456789999999 667777776531  245899999999999999999999     88 9999999999999964 489


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++++|||.+..............+++.|++||++.+.
T Consensus       149 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~  185 (265)
T cd08217         149 VKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHM  185 (265)
T ss_pred             EEEecccccccccCCcccccccccCCCccChhhhcCC
Confidence            9999999988766554434456789999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.88  E-value=2.7e-22  Score=177.69  Aligned_cols=166  Identities=25%  Similarity=0.383  Sum_probs=131.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||.|+||.||+|.+.     .+++....      ..+.+.+|+.+++.++|        ++++++++.+....
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~~~~   72 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRH--------ENIIGLLDILRPPS   72 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCC--------cchhhhhhhhcccC
Confidence            5899999999999999999863     24433222      23567889999999987        66888888765221


Q ss_pred             -cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 -VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 -~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....+|+||+|+++++.+.+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++++|||
T Consensus        73 ~~~~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~-~~~~L~dfg  148 (330)
T cd07834          73 PEDFNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSN-CDLKICDFG  148 (330)
T ss_pred             cccccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCC-CCEEEcccC
Confidence             1234789999999888888776543  599999999999999999999999 99999999999999655 899999999


Q ss_pred             chhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+........   ......+++.|+|||++.+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (330)
T cd07834         149 LARGVDPDEDEKGFLTEYVVTRWYRAPELLLSS  181 (330)
T ss_pred             ceEeecccccccccccccccccCcCCceeeecc
Confidence            9886655431   22345678999999998765

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.88  E-value=3.9e-22  Score=169.92  Aligned_cols=159  Identities=24%  Similarity=0.299  Sum_probs=126.2

Q ss_pred             EEecccCceeEEEeccee--------EEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSKT--------QVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~~--------~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||.||+|.+..        .++.....     ...+.+|+.++..+.|        ++++++++.+.    ..
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~----~~   68 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGH--------PNVVRLLGVCT----EE   68 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCC--------CChheeeeeec----CC
Confidence            368999999999997642        33332221     3466789999999887        66888888776    57


Q ss_pred             eEEEEEeccC-CccHHHHHHhhC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSK-------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      ..+++||||+ +++|.+.+....       ...+++..+..++.|++.||.|||++ +++||||+|+||+++.+ +.+++
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~-~~~~l  146 (262)
T cd00192          69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGED-LVVKI  146 (262)
T ss_pred             CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCC-CcEEE
Confidence            8899999999 788888876641       24589999999999999999999999 99999999999999655 89999


Q ss_pred             EeccchhHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||.+.......  .......+++.|+|||.+...
T Consensus       147 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (262)
T cd00192         147 SDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDG  182 (262)
T ss_pred             cccccccccccccccccccCCCcCccccCHHHhccC
Confidence            9999988665543  223345678899999987653

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.88  E-value=6.5e-22  Score=169.28  Aligned_cols=163  Identities=22%  Similarity=0.284  Sum_probs=128.7

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||++.+.     .+++....      ....+..|+.+++.++|        ++|+++++.+.   
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~--------~~i~~~~~~~~---   69 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH--------PNLVKYYGVEV---   69 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC--------CChhheeeeEe---
Confidence            5899999999999999999752     23333221      23456789999999988        66888888655   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+++|+||+ +++|.+.+....  .+++..+..++.|++.||.|||+. ||+|+||+|+||+++. .+.++++|||
T Consensus        70 -~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~-~~~~kl~d~g  144 (264)
T cd06626          70 -HREKVYIFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDH-NGVIKLGDFG  144 (264)
T ss_pred             -cCCEEEEEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECC-CCCEEEcccc
Confidence             678899999999 566666665432  478999999999999999999999 9999999999999955 5899999999


Q ss_pred             chhHhhhCCCCCC----cccCCCCccchhhhhhcc
Q psy16752        225 ATELAATGHKLPV----SFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       225 ~a~~~~~~~~~~~----~~~gt~~~~aPE~l~~~~  255 (284)
                      ++...........    ...+++.|++||++.+..
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  179 (264)
T cd06626         145 CAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGK  179 (264)
T ss_pred             cccccCCCCCcccccccCCcCCcCccChhhccCCC
Confidence            9876654332222    356889999999987654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.88  E-value=5.3e-22  Score=172.46  Aligned_cols=163  Identities=23%  Similarity=0.324  Sum_probs=127.5

Q ss_pred             ceEEEEEecccCceeEEEecce--------eEEEecCC--------CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQ--------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      +|++.+.||+|+||.||++...        .++++...        ....+..|+.++..+.+       |++++.+++.
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~-------~~~i~~~~~~   73 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRR-------CPFLVTLHYA   73 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccC-------Ccchhhhhee
Confidence            3889999999999999998642        23343221        22446779999998864       3778888887


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.    ....+|+||||+ +++|.+.+....  .+++..++.++.|++.||.|||.. +++||||+|.||+++.+ +.++
T Consensus        74 ~~----~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~~-~~~~  145 (288)
T cd05583          74 FQ----TDTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDSE-GHVV  145 (288)
T ss_pred             ee----cCCEEEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCC-CCEE
Confidence            76    677899999999 667877776543  489999999999999999999999 99999999999999554 7899


Q ss_pred             EEeccchhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|||++........ ......|+..|+|||.+.+.
T Consensus       146 l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (288)
T cd05583         146 LTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGG  181 (288)
T ss_pred             EEECccccccccccccccccccCCccccCHHHhcCC
Confidence            999998876544322 22345689999999987654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.88  E-value=3.9e-22  Score=170.14  Aligned_cols=162  Identities=17%  Similarity=0.295  Sum_probs=124.7

Q ss_pred             ceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +|++.+.||.|+||.||+|.+.    .+++....   ....+.+|+.+++.+.|        ++++++++.+.    ...
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----~~~   72 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH--------PKLVQLYGVCT----ERS   72 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCC--------CCeeeEEEEEc----cCC
Confidence            5999999999999999998653    23443322   23567889999999988        66888888765    667


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ..|+||||+ +++|.+.+.... ..+++..+..++.|++.||.|||+. +++|+||||+||+++ +++.++++|||.+..
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~-~~~~~~l~d~g~~~~  149 (256)
T cd05112          73 PICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVG-ENQVVKVSDFGMTRF  149 (256)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEc-CCCeEEECCCcceee
Confidence            899999999 566666665433 3588999999999999999999999 999999999999995 457999999998865


Q ss_pred             hhhCCCC-CCcccCCCCccchhhhhh
Q psy16752        229 AATGHKL-PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       229 ~~~~~~~-~~~~~gt~~~~aPE~l~~  253 (284)
                      ....... .....++..|+|||.+.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~aPe~~~~  175 (256)
T cd05112         150 VLDDQYTSSTGTKFPVKWSSPEVFSF  175 (256)
T ss_pred             cccCcccccCCCccchhhcCHhHhcc
Confidence            4332111 113335668999998753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.88  E-value=5.9e-22  Score=173.79  Aligned_cols=161  Identities=20%  Similarity=0.378  Sum_probs=124.1

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++++.||+|+||.||++.++     .+++....       ....+..|+.+++.++|        ++|+++++.+.  
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~--   71 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN--------PFVVSMFCSFE--   71 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC--------CCeeeeEEEEe--
Confidence            5999999999999999999763     24443221       12345678899998887        66898888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +++|.+.+....  .+++..+..++.|++.||.|||+. +++||||||+||+++. .+.++++||
T Consensus        72 --~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~-~~~~~l~df  145 (305)
T cd05609          72 --TKRHLCMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITS-MGHIKLTDF  145 (305)
T ss_pred             --cCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECC-CCCEEEeeC
Confidence              778899999999 566666665443  589999999999999999999999 9999999999999954 589999999


Q ss_pred             cchhHhhhCC---------------CCCCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGH---------------KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~---------------~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |.+.......               .......++..|+|||.+.+
T Consensus       146 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  190 (305)
T cd05609         146 GLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR  190 (305)
T ss_pred             CCccccCcCccccccccccccchhhccccCCccCccccCchhccC
Confidence            9876321110               01113467888999997643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.88  E-value=5.6e-22  Score=171.40  Aligned_cols=160  Identities=26%  Similarity=0.372  Sum_probs=123.9

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhh-cCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVR-DGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |++.+.||+|+||.||+|.+.     .+++.....     .....+|+.++.++. |        +|++++++.+..  .
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h--------~~i~~~~~~~~~--~   70 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPH--------PNILRLIEVLFD--R   70 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCC--------CCccceEEEEec--C
Confidence            678999999999999999762     233432221     123356888888775 5        678888887651  1


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....+++||||+.+++++.+.... ..+++..+..++.|++.||.|||.. |++||||+|+||+++.  +.++|+|||++
T Consensus        71 ~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~--~~~kl~dfg~~  146 (282)
T cd07831          71 KTGRLALVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD--DILKLADFGSC  146 (282)
T ss_pred             CCCcEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC--CCeEEEecccc
Confidence            226899999999989998887643 3589999999999999999999999 9999999999999955  89999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ......... ....++..|+|||++.
T Consensus       147 ~~~~~~~~~-~~~~~~~~y~aPE~~~  171 (282)
T cd07831         147 RGIYSKPPY-TEYISTRWYRAPECLL  171 (282)
T ss_pred             cccccCCCc-CCCCCCcccCChhHhh
Confidence            765433222 2345788999999764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.88  E-value=5.1e-22  Score=168.82  Aligned_cols=164  Identities=25%  Similarity=0.434  Sum_probs=131.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||.|+||.||++.+.     .+++...      .....+..|+++++.++|        ++++++++.+.   
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~~~~~~~~~~---   69 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH--------PNIIKYYESFE---   69 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC--------CChhheEEEEe---
Confidence            4899999999999999999874     2333322      223457789999999988        66888887665   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                       .....++||||+ +++|.+.+....  ...+++..+..++.+++.||.|||+. |++|+||+|+||+++. .+.++++|
T Consensus        70 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~-~~~~~l~d  146 (258)
T cd08215          70 -EKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTS-NGLVKLGD  146 (258)
T ss_pred             -cCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcC-CCcEEECC
Confidence             568999999999 567777776642  24699999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||.+..............|++.|+|||.+.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  178 (258)
T cd08215         147 FGISKVLSSTVDLAKTVVGTPYYLSPELCQNK  178 (258)
T ss_pred             ccceeecccCcceecceeeeecccChhHhccC
Confidence            99987665554344456789999999987544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.88  E-value=6.2e-22  Score=170.37  Aligned_cols=162  Identities=19%  Similarity=0.201  Sum_probs=123.5

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .+|.+.+.||+|+||.||+|.+.        .+++.....     .+.+..|+.+++.+.|        ++++++++.+.
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~   77 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH--------PHIVKLIGVIT   77 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC--------CchhceeEEEc
Confidence            46999999999999999998752        233433222     2357789999999988        66888887654


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                           ....|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. .+.++++
T Consensus        78 -----~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~-~~~~~l~  149 (270)
T cd05056          78 -----ENPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSS-PDCVKLG  149 (270)
T ss_pred             -----CCCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEec-CCCeEEc
Confidence                 34578999999 677877776543 3589999999999999999999999 9999999999999965 4899999


Q ss_pred             eccchhHhhhCCCCCC-cccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPV-SFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~-~~~gt~~~~aPE~l~~  253 (284)
                      |||++........... ...++..|+|||.+.+
T Consensus       150 d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (270)
T cd05056         150 DFGLSRYLEDESYYKASKGKLPIKWMAPESINF  182 (270)
T ss_pred             cCceeeecccccceecCCCCccccccChhhhcc
Confidence            9999875543321111 2234567999997643

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.88  E-value=5e-22  Score=174.42  Aligned_cols=158  Identities=22%  Similarity=0.314  Sum_probs=127.5

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .+|++.+.||+|+||+||+|...     ++++....       ....+.+|+.+++.++|        +|++++++.+. 
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--------~niv~~~~~~~-   85 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRH--------PNTIEYKGCYL-   85 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCC--------CCEEEEEEEEE-
Confidence            46999999999999999999752     23443221       11356789999999988        66999888776 


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                         .....|+||||+.+++.+.+.... ..+++..+..++.||+.||.|||+. +|+||||+|+||+++. ++.++|+||
T Consensus        86 ---~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~-~~~~kL~df  159 (307)
T cd06607          86 ---REHTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTE-PGTVKLADF  159 (307)
T ss_pred             ---eCCeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECC-CCCEEEeec
Confidence               677899999999999888776544 3589999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |++......    ....+++.|+|||++.
T Consensus       160 g~~~~~~~~----~~~~~~~~y~aPE~~~  184 (307)
T cd06607         160 GSASLVSPA----NSFVGTPYWMAPEVIL  184 (307)
T ss_pred             CcceecCCC----CCccCCccccCceeee
Confidence            988654332    2456788899999873

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PHA02988 hypothetical protein; Provisional

Probab=99.88  E-value=5.4e-22  Score=172.44  Aligned_cols=158  Identities=11%  Similarity=0.107  Sum_probs=123.4

Q ss_pred             EEecccCceeEEEeccee---EEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         82 RKLGWGHFSTVWFTGSKT---QVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~~---~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ..||+|++|.||+|....   +++.....       .+.+.+|+.++++++|        +||+++++.+.........+
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~nIv~~~g~~~~~~~~~~~~   97 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS--------NNILKIYGFIIDIVDDLPRL   97 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCC--------CCEEEEeeeEEecccCCCce
Confidence            578999999999998743   33433221       2445689999999998        67999998775322345679


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      ++||||+ +|+|.+.+....  .+++.....++.|++.||.|||...+++||||||+|||++. ++.++++|||++....
T Consensus        98 ~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~-~~~~kl~dfg~~~~~~  174 (283)
T PHA02988         98 SLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE-NYKLKIICHGLEKILS  174 (283)
T ss_pred             EEEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC-CCcEEEcccchHhhhc
Confidence            9999999 667777776543  58899999999999999999997328999999999999955 4899999999987654


Q ss_pred             hCCCCCCcccCCCCccchhhhhh
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ..   .....||+.|+|||++.+
T Consensus       175 ~~---~~~~~~~~~y~aPE~~~~  194 (283)
T PHA02988        175 SP---PFKNVNFMVYFSYKMLND  194 (283)
T ss_pred             cc---cccccCcccccCHHHhhh
Confidence            32   234568899999999875

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.88  E-value=5.1e-22  Score=171.84  Aligned_cols=161  Identities=29%  Similarity=0.401  Sum_probs=127.5

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhh-cCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVR-DGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |++.+.||+|+||+||+|...     .+++.....     .....+|+..++++. |        ++++++++.+.    
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h--------~~i~~~~~~~~----   68 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEH--------PNIVKLKEVFR----   68 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCC--------CCchhHHHHhh----
Confidence            678899999999999999863     233332211     123456888888887 6        66888888876    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      .....|+||||+++++.+.+.......+++..+..++.|++.+|.|||+. +++|+||+|+||+++. .+.++|+|||.+
T Consensus        69 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~-~~~~~l~d~~~~  146 (283)
T cd07830          69 ENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSG-PEVVKIADFGLA  146 (283)
T ss_pred             cCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcC-CCCEEEeecccc
Confidence            67889999999999999888776544589999999999999999999999 9999999999999955 589999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ....... ......++..|+|||++.+
T Consensus       147 ~~~~~~~-~~~~~~~~~~~~aPE~~~~  172 (283)
T cd07830         147 REIRSRP-PYTDYVSTRWYRAPEILLR  172 (283)
T ss_pred             eeccCCC-CcCCCCCcccccCceeeec
Confidence            7554322 2224567889999998743

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.88  E-value=4.4e-22  Score=171.43  Aligned_cols=159  Identities=21%  Similarity=0.256  Sum_probs=119.5

Q ss_pred             ceEEEEEe--cccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKL--GWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~L--G~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .|.+.+.+  |+|+||.||++..+     .+++..... .....|+.+...+..       |++++++++.+.    ...
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~-~~~~~e~~~~~~~~~-------h~~iv~~~~~~~----~~~   82 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAK-NFNAIEPMVHQLMKD-------NPNFIKLYYSVT----TLK   82 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehh-hcchhhHHHHHHhhc-------CCCEEEEEEEEe----cCC
Confidence            46776666  99999999999763     233332211 111123333332321       377999998876    667


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+. |++||||||+||+++.+.+.++++|||++..
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            899999999 678888876653  589999999999999999999999 9999999999999977655999999998865


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ....    ....++..|+|||++.+.
T Consensus       160 ~~~~----~~~~~~~~y~aPE~~~~~  181 (267)
T PHA03390        160 IGTP----SCYDGTLDYFSPEKIKGH  181 (267)
T ss_pred             cCCC----ccCCCCCcccChhhhcCC
Confidence            5432    245688999999998654

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.88  E-value=4.7e-22  Score=169.45  Aligned_cols=161  Identities=26%  Similarity=0.343  Sum_probs=127.1

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|+..+.||+|+||.||+|...     .+++....         ..+.+..|+.+++.++|        ++++++++.+.
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~   72 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH--------PNIVQYLGTER   72 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC--------CCchheeeeEe
Confidence            4778899999999999999763     23333211         22457789999999988        66888888665


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|++|||+ +++|.+.+.+..  .+++..+..++.||+.||.|||+. ||+|+||+|+||+++.+ +.++|+
T Consensus        73 ----~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~-~~~kl~  144 (258)
T cd06632          73 ----EEDNLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTN-GVVKLA  144 (258)
T ss_pred             ----cCCeEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCC-CCEEEc
Confidence                677899999999 567777765543  488999999999999999999999 99999999999999654 899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||.+....... ......+++.|++||.+...
T Consensus       145 d~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~  176 (258)
T cd06632         145 DFGMAKQVVEFS-FAKSFKGSPYWMAPEVIAQQ  176 (258)
T ss_pred             cCccceeccccc-cccccCCCcceeCHHHhcCC
Confidence            999887654332 23356688999999987554

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.88  E-value=6.1e-22  Score=169.81  Aligned_cols=163  Identities=23%  Similarity=0.292  Sum_probs=125.8

Q ss_pred             EEEEEecccCceeEEEecce---------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         79 RVTRKLGWGHFSTVWFTGSK---------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .+.+.||.|.||.||+|.++         ..++.....     ...+.+|++.++.++|        +||+++++.+.  
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h--------~ni~~~~g~~~--   71 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRH--------PNIVKLYGFCI--   71 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSB--------TTBE-EEEEEE--
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccc--------ccccccccccc--
Confidence            46789999999999999886         234443221     3567889999999988        77999998776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+++||||+ .|+|.+.+.......+++..+..++.||+.||.|||+. +++|+||+|+||+++.+ +.++|+||
T Consensus        72 --~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~-~~~Kl~~f  147 (259)
T PF07714_consen   72 --ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSN-GQVKLSDF  147 (259)
T ss_dssp             --SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETT-TEEEEEST
T ss_pred             --ccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc-cccccccc
Confidence              556699999999 57888888887445699999999999999999999999 99999999999999554 79999999


Q ss_pred             cchhHhhhCCC--CCCcccCCCCccchhhhhhcc
Q psy16752        224 NATELAATGHK--LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       224 g~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |++........  ..........|+|||.+....
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  181 (259)
T PF07714_consen  148 GLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGE  181 (259)
T ss_dssp             TTGEETTTSSSEEESTTSESGGGGS-HHHHHHSE
T ss_pred             cccccccccccccccccccccccccccccccccc
Confidence            99876632211  122345778899999987665

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.88  E-value=5.2e-22  Score=170.69  Aligned_cols=167  Identities=17%  Similarity=0.209  Sum_probs=121.8

Q ss_pred             eEEEEEecccCceeEEEecce--------eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      |++.+.||+|+||.||.|...        .+++.....      ...+..|+.+++.+.|        ++++++++.+..
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~~   72 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH--------PNVMKLIGVCFE   72 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC--------CCeeeEEeeecc
Confidence            567889999999999998742        344433221      1356789999999988        668888775531


Q ss_pred             ec--cCCeEEEEEeccC-CccHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC
Q psy16752        144 CG--VNGTHVCMVFEVL-GHNLLKLIVKSK----YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       144 ~~--~~~~~~~iv~e~~-~~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~  216 (284)
                      ..  ......+++|||+ +++|...+....    ...+++..+..++.|++.||.|||+. +++||||||+||+++. .+
T Consensus        73 ~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil~~~-~~  150 (273)
T cd05035          73 ASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLRE-DM  150 (273)
T ss_pred             CCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEEECC-CC
Confidence            11  1223579999999 677777765432    13489999999999999999999999 9999999999999954 48


Q ss_pred             cEEEEeccchhHhhhCCCCC--CcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHKLP--VSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~~--~~~~gt~~~~aPE~l~~~  254 (284)
                      .++++|||++..........  ....++..|+|||.+.+.
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  190 (273)
T cd05035         151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR  190 (273)
T ss_pred             eEEECCccceeeccccccccccccccCCccccCHhhcccC
Confidence            99999999987554332211  122356789999987543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.88  E-value=2.1e-22  Score=179.12  Aligned_cols=165  Identities=25%  Similarity=0.380  Sum_probs=128.7

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhh-hcCCCCCcccchhccccccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~  141 (284)
                      +.++|.+.+.||+|+||.||+|.+.     .+++...      .....+.+|+.+++.+ .|        +||+++++.+
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~ni~~~~~~~   76 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH--------PNIVKLLNVI   76 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC--------CCccceeeee
Confidence            3457999999999999999999763     2333221      1234467799999999 77        6799988865


Q ss_pred             eEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        142 KICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      .  ......+|+||||++++|...+...   .+++..+..++.||+.||.|||+. ||+||||+|+||+++.+ +.++++
T Consensus        77 ~--~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~-~~~kl~  149 (337)
T cd07852          77 K--AENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSD-CRVKLA  149 (337)
T ss_pred             c--cCCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCC-CcEEEe
Confidence            4  1234578999999988888777554   488999999999999999999999 99999999999999554 899999


Q ss_pred             eccchhHhhhCCC-----CCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHK-----LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~-----~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.+........     ......||++|+|||++.+
T Consensus       150 d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  186 (337)
T cd07852         150 DFGLARSLSELEENPENPVLTDYVATRWYRAPEILLG  186 (337)
T ss_pred             eccchhccccccccccCcchhcccccccccCceeeec
Confidence            9998876544322     2224568999999998754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.88  E-value=6.6e-22  Score=170.98  Aligned_cols=156  Identities=28%  Similarity=0.314  Sum_probs=122.2

Q ss_pred             ecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ||+|+||+||+|.++     .+++....       ....+..|+.+++.++|        ++++.+++.+.    .....
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----~~~~~   68 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS--------RFIVSLAYAFE----TKDDL   68 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC--------CCEeeeeeEEe----cCCeE
Confidence            689999999998753     23333211       23345679999999987        66888888776    67789


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |+||||+ +++|.+.+.......+++..+..++.|++.||.|||.. |++||||+|+||+++. ++.++++|||.+....
T Consensus        69 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~-~~~~~l~dfg~~~~~~  146 (277)
T cd05577          69 CLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDD-HGNVRISDLGLAVELK  146 (277)
T ss_pred             EEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECC-CCCEEEccCcchhhhc
Confidence            9999999 56777777665444689999999999999999999999 9999999999999954 4899999999987654


Q ss_pred             hCCCCCCcccCCCCccchhhhhhc
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .. .......++..|++||++.+.
T Consensus       147 ~~-~~~~~~~~~~~y~~PE~~~~~  169 (277)
T cd05577         147 GG-KKIKGRAGTPGYMAPEVLQGE  169 (277)
T ss_pred             cC-CccccccCCCCcCCHHHhcCC
Confidence            42 223345678899999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.88  E-value=4.9e-22  Score=169.97  Aligned_cols=162  Identities=24%  Similarity=0.371  Sum_probs=126.9

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|.+.+.||+|+||.||++.+..     .+++...         ....+..|+.+++.++|        ++++++++.+.
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~   72 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH--------PAIVKFHASFL   72 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC--------CcHHHHHHHHh
Confidence            58999999999999999987632     2222211         12245678888888887        66898888776


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                          .....++||||+ ++++...+...  ....+++..+..++.|++.||.|||+. |++|+||+|+||+++.  +.++
T Consensus        73 ----~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~--~~~~  145 (260)
T cd08222          73 ----ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN--NLLK  145 (260)
T ss_pred             ----cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec--CCEe
Confidence                667899999999 56766666432  224589999999999999999999999 9999999999999953  5699


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++|||.+..............|++.|+|||.+.+
T Consensus       146 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  179 (260)
T cd08222         146 IGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKH  179 (260)
T ss_pred             ecccCceeecCCCcccccCCCCCcCccCHHHHcc
Confidence            9999998776555444556678999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.87  E-value=1.4e-21  Score=174.55  Aligned_cols=163  Identities=25%  Similarity=0.371  Sum_probs=126.0

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|.+.+.||+|+||.||+|.+.     .+++.....      .+.+.+|+.+++.++|        +||+++++.+..
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h--------~~iv~~~~~~~~   87 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH--------ENVIGLLDVFTP   87 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCC--------Ccccceeeeeee
Confidence            357999999999999999999752     244433221      2446679999999988        668888776542


Q ss_pred             ec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ..  ......|++++++++++.+.+...   .+++..+..++.||+.||.|||+. ||+||||||+||+++.+ +.++++
T Consensus        88 ~~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~-~~~kl~  162 (345)
T cd07877          88 ARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNED-CELKIL  162 (345)
T ss_pred             cccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCC-CCEEEe
Confidence            11  123457899999988887766543   489999999999999999999999 99999999999999554 789999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++......   .....+++.|+|||.+.+
T Consensus       163 dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  191 (345)
T cd07877         163 DFGLARHTDDE---MTGYVATRWYRAPEIMLN  191 (345)
T ss_pred             ccccccccccc---ccccccCCCccCHHHHhC
Confidence            99998754322   234567889999998754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.87  E-value=6.5e-22  Score=168.84  Aligned_cols=157  Identities=22%  Similarity=0.243  Sum_probs=123.1

Q ss_pred             EEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|++|.||+|.+.        .+++.....     .+.+.+|+.++++++|        ++++++++.+.    . 
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~----~-   67 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDH--------ENLIRLYGVVL----T-   67 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCC--------CCccceeEEEc----C-
Confidence            36899999999999752        244443322     2356789999999988        66888887765    4 


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...++||||+ +++|.+.+.......+++..+..++.|++.||.|||.. |++|+||+|+||+++.+ +.++++|||.+.
T Consensus        68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~-~~~kl~dfg~~~  145 (257)
T cd05040          68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASD-DKVKIGDFGLMR  145 (257)
T ss_pred             CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecC-CEEEeccccccc
Confidence            7899999999 77888888765424589999999999999999999999 99999999999999665 899999999987


Q ss_pred             HhhhCCCC---CCcccCCCCccchhhhhh
Q psy16752        228 LAATGHKL---PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~---~~~~~gt~~~~aPE~l~~  253 (284)
                      ........   .....++..|++||.+..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  174 (257)
T cd05040         146 ALPQNEDHYVMEEHLKVPFAWCAPESLRT  174 (257)
T ss_pred             cccccccceecccCCCCCceecCHHHhcc
Confidence            66543211   113457788999997753

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.87  E-value=7.3e-22  Score=176.21  Aligned_cols=163  Identities=22%  Similarity=0.370  Sum_probs=127.5

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++...||+|+||.||+|.+.     .+++....      ....+.+|+.+++.+.|        ++++.+++.+..
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~~   85 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDH--------ENVIGLLDVFTP   85 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccC--------CCHHHHHHHhhc
Confidence            357999999999999999999763     24443221      22446679999999988        668887776642


Q ss_pred             ec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ..  .....+|+|+||++++|.+.+...   .+++..+..++.||+.||.|||+. ||+||||+|+||+++. ++.++|+
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~-~~~~kL~  160 (343)
T cd07851          86 ASSLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNE-DCELKIL  160 (343)
T ss_pred             cccccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECC-CCCEEEc
Confidence            11  122358999999998888887653   489999999999999999999999 9999999999999955 4889999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||.+......   .....++..|+|||++.+
T Consensus       161 dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  189 (343)
T cd07851         161 DFGLARHTDDE---MTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             ccccccccccc---ccCCcccccccCHHHHhC
Confidence            99998755432   234567889999998865

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.87  E-value=9.6e-22  Score=170.26  Aligned_cols=156  Identities=19%  Similarity=0.241  Sum_probs=115.6

Q ss_pred             EecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         83 KLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .||+|+||.||+|.+.     ++++.....       ......|..+++.+.+.     .|++++.+++.+.    ....
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~----~~~~   71 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-----DCPFIVCMSYAFH----TPDK   71 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-----CCCcEeeeeeeee----cCCE
Confidence            4799999999998762     344432211       11234454444444331     2367888888776    6788


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      +|+||||+ +++|...+...  ..+++..++.++.|++.||.|||+. +|+||||||+||+++.+ +.++++|||++...
T Consensus        72 ~~~v~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~-~~~kl~dfg~~~~~  147 (278)
T cd05606          72 LSFILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEH-GHVRISDLGLACDF  147 (278)
T ss_pred             EEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCC-CCEEEccCcCcccc
Confidence            99999999 56666666443  3589999999999999999999999 99999999999999554 78999999988654


Q ss_pred             hhCCCCCCcccCCCCccchhhhhh
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ...  ......|+..|+|||++.+
T Consensus       148 ~~~--~~~~~~~~~~y~aPE~~~~  169 (278)
T cd05606         148 SKK--KPHASVGTHGYMAPEVLQK  169 (278)
T ss_pred             Ccc--CCcCcCCCcCCcCcHHhcC
Confidence            322  2335579999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.87  E-value=5.4e-22  Score=170.75  Aligned_cols=165  Identities=17%  Similarity=0.179  Sum_probs=119.5

Q ss_pred             EEEEEecccCceeEEEecce-------eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         79 RVTRKLGWGHFSTVWFTGSK-------TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~~-------~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+.+.||+|+||.||+|.+.       .+++....      ..+.+..|+.+++.++|        ++++++++.+....
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~~~~   73 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH--------PNVMRLIGVCLQTV   73 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC--------CCcceEEEEEccCC
Confidence            45678999999999999752       23333221      13456778999999988        66888876532111


Q ss_pred             --cCCeEEEEEeccC-CccHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE
Q psy16752        146 --VNGTHVCMVFEVL-GHNLLKLIVKSK----YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       146 --~~~~~~~iv~e~~-~~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v  218 (284)
                        ......+++|||+ +++|.+.+....    ...+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+
T Consensus        74 ~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~-~~~~  151 (272)
T cd05075          74 ESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNE-NMNV  151 (272)
T ss_pred             cccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEcC-CCCE
Confidence              1234578999999 677777664321    13478999999999999999999999 9999999999999954 4889


Q ss_pred             EEEeccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        219 KTLALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      +++|||++.........  .....+++.|++||.+.+
T Consensus       152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  188 (272)
T cd05075         152 CVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD  188 (272)
T ss_pred             EECCCCcccccCcccceecCCcccCCcccCCHHHccC
Confidence            99999998765433211  112245667999998754

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.87  E-value=8.3e-22  Score=167.81  Aligned_cols=160  Identities=23%  Similarity=0.283  Sum_probs=124.3

Q ss_pred             EEEEEecccCceeEEEeccee---------EEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         79 RVTRKLGWGHFSTVWFTGSKT---------QVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~~~---------~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++.+.||.|+||.||++.+..         +++.....     ...+..|+.++..+.|        ++++++++.+.  
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~--   71 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH--------PNIVKLLGVCT--   71 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC--------CchheEEEEEc--
Confidence            567899999999999997632         33433222     2367789999999877        66898888776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        .....+++|||+ ++++.+.+.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.+ +.++++||
T Consensus        72 --~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~-~~~~l~df  147 (258)
T smart00219       72 --EEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGEN-LVVKISDF  147 (258)
T ss_pred             --CCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccC-CeEEEccc
Confidence              667899999999 66777777654422389999999999999999999999 99999999999999554 79999999


Q ss_pred             cchhHhhhCCCCCC-cccCCCCccchhhhh
Q psy16752        224 NATELAATGHKLPV-SFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~~~~~-~~~gt~~~~aPE~l~  252 (284)
                      |.+........... ...+++.|+|||.+.
T Consensus       148 g~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~  177 (258)
T smart00219      148 GLSRDLYDDDYYKKKGGKLPIRWMAPESLK  177 (258)
T ss_pred             CCceecccccccccccCCCcccccChHHhc
Confidence            99876654422221 223678899999874

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.87  E-value=6.5e-22  Score=171.90  Aligned_cols=164  Identities=17%  Similarity=0.233  Sum_probs=124.6

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|++...||+|+||.||+|.+.          .+++.....     ...+.+|+.+++.+.|        ++++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h--------~~iv~~~~~   76 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH--------PNIVKLLGV   76 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC--------CchheEEEE
Confidence            46999999999999999998642          233433221     2457789999999988        668888886


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCc
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------------YRGIPLENVRSIIRQILQGLNYLHTKCRI  199 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~gi  199 (284)
                      +.    .....|+||||+ +++|.+++....                    ...+++..+..++.|++.||.|||.. ++
T Consensus        77 ~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~-~i  151 (288)
T cd05050          77 CA----VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KF  151 (288)
T ss_pred             Ec----CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-Ce
Confidence            65    667789999999 568877776432                    12367888999999999999999999 99


Q ss_pred             EecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        200 IHTDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       200 vHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      +||||||+||+++. .+.++++|||++.........  ......+.+|+|||++.+
T Consensus       152 ~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (288)
T cd05050         152 VHRDLATRNCLVGE-NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY  206 (288)
T ss_pred             ecccccHhheEecC-CCceEECccccceecccCccccccCCCccChhhcCHHHHhc
Confidence            99999999999954 489999999987654332111  112334667999998654

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.87  E-value=7.8e-22  Score=170.10  Aligned_cols=162  Identities=25%  Similarity=0.363  Sum_probs=129.9

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhh-cCCCCCcccchhccccccceE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVR-DGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +|.+.+.||+|+||.||+|.++     .++++...       ....+..|..++..+. |        ++++++++.+. 
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~--------~~i~~~~~~~~-   72 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH--------PGIIKLYYTFQ-   72 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccC--------CCchhHHHHhc-
Confidence            5999999999999999999763     24444322       1245677888888887 6        67898888776 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         .....++|||++ +++|.+.+....  .+++..+..++.|++.||.|||+. |++|+||+|+||+++. ++.++++|
T Consensus        73 ---~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~-~~~~~l~d  145 (280)
T cd05581          73 ---DEENLYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDK-DMHIKITD  145 (280)
T ss_pred             ---CCceEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECC-CCCEEecC
Confidence               778899999999 788888886653  599999999999999999999999 9999999999999955 47899999


Q ss_pred             ccchhHhhhCC--------------------CCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGH--------------------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~--------------------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++.......                    .......+++.|++||++.+.
T Consensus       146 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~  197 (280)
T cd05581         146 FGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK  197 (280)
T ss_pred             CccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC
Confidence            99987654432                    122345688999999987653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.87  E-value=7.1e-22  Score=169.71  Aligned_cols=164  Identities=24%  Similarity=0.263  Sum_probs=125.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|++.+.||+|+||.||+|.+.     .+++....         ....+.+|+.+++.++|        ++++++++.+.
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~   74 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQH--------ERIVQYYGCLR   74 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCC--------CCeeeEEEEEE
Confidence            5899999999999999999752     23333211         12346779999999988        66888887654


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                        ......++++|||+ +++|.+.+....  .+++..+..++.|++.||.|||+. +|+||||+|+||+++. .+.++|+
T Consensus        75 --~~~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~-~~~~~l~  148 (266)
T cd06651          75 --DRAEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDS-AGNVKLG  148 (266)
T ss_pred             --cCCCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECC-CCCEEEc
Confidence              11346789999999 567777776543  489999999999999999999999 9999999999999954 4789999


Q ss_pred             eccchhHhhhCC---CCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGH---KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~---~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.......   .......++..|+|||.+.+.
T Consensus       149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  184 (266)
T cd06651         149 DFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGE  184 (266)
T ss_pred             cCCCccccccccccCCccccCCccccccCHHHhCCC
Confidence            999987543211   112235688999999988643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=9.9e-22  Score=168.65  Aligned_cols=164  Identities=26%  Similarity=0.320  Sum_probs=126.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC---------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP---------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +|++.+.||+|+||.||+|.++     .+++...         .....+.+|+.+++.++|        ++++++++.+.
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h--------~~i~~~~~~~~   74 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRH--------DRIVQYYGCLR   74 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCC--------CCcceEEEEEE
Confidence            5999999999999999999763     2333321         112356789999999988        66888887653


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                        ......++++|||+ +++|.+.+....  .+++..+..++.||+.||.|||+. |++|+||+|+||+++. ++.++++
T Consensus        75 --~~~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~-~~~~~l~  148 (264)
T cd06653          75 --DPEEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDS-AGNVKLG  148 (264)
T ss_pred             --cCCCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcC-CCCEEEC
Confidence              12345788999999 567777776543  488999999999999999999999 9999999999999954 4789999


Q ss_pred             eccchhHhhhCC---CCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGH---KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~---~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.......   .......++..|+|||.+.+.
T Consensus       149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  184 (264)
T cd06653         149 DFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGE  184 (264)
T ss_pred             ccccccccccccccCccccccCCcccccCHhhhcCC
Confidence            999987543211   111245688999999988654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.87  E-value=1e-21  Score=167.90  Aligned_cols=162  Identities=27%  Similarity=0.381  Sum_probs=131.5

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++.+.||.|++|.||+|.+.     .+++....     ....+..|+..+..+.|        ++++++++.+.    
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----   69 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES--------PYVVKCYGAFY----   69 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC--------CCeeeEEEEEc----
Confidence            5899999999999999999774     23333222     24567889999999887        66888888766    


Q ss_pred             CCeEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        147 NGTHVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      .....++||||+. ++|.+.+...  ..+++..+..++.|++.||.|||+ . +++||||+|+||+++. ++.++++|||
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~-~~~~~l~df~  145 (264)
T cd06623          70 KEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINS-KGEVKIADFG  145 (264)
T ss_pred             cCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECC-CCCEEEccCc
Confidence            6688999999994 7777777654  358999999999999999999999 9 9999999999999955 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+..............++..|+|||.+...
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~  175 (264)
T cd06623         146 ISKVLENTLDQCNTFVGTVTYMSPERIQGE  175 (264)
T ss_pred             cceecccCCCcccceeecccccCHhhhCCC
Confidence            988765554444456789999999987554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.87  E-value=1.2e-21  Score=166.55  Aligned_cols=156  Identities=20%  Similarity=0.246  Sum_probs=118.8

Q ss_pred             EecccCceeEEEecce----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEE
Q psy16752         83 KLGWGHFSTVWFTGSK----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCM  153 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~i  153 (284)
                      .||+|+||.||+|...    .+++.....     ...+.+|+.+++.+.|        ++++++++.+.    .....++
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~~~~~l   69 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH--------PNIVKLIGVCT----QRQPIYI   69 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC--------CCcCeEEEEEe----cCCccEE
Confidence            6899999999999652    344433221     2346789999999987        66888888765    6678999


Q ss_pred             EeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhC
Q psy16752        154 VFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATG  232 (284)
Q Consensus       154 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~  232 (284)
                      ||||+ +++|.+.+.... ..+++..+..++.|++.||.|||.. |++||||+|+||+++. ++.++++|||++......
T Consensus        70 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~-~~~~~l~d~g~~~~~~~~  146 (250)
T cd05085          70 VMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGE-NNVLKISDFGMSRQEDDG  146 (250)
T ss_pred             EEECCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcC-CCeEEECCCccceecccc
Confidence            99999 677777665443 3588999999999999999999999 9999999999999954 479999999988654332


Q ss_pred             CCCC-CcccCCCCccchhhhhh
Q psy16752        233 HKLP-VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       233 ~~~~-~~~~gt~~~~aPE~l~~  253 (284)
                      .... ....++..|+|||++.+
T Consensus       147 ~~~~~~~~~~~~~y~aPE~~~~  168 (250)
T cd05085         147 IYSSSGLKQIPIKWTAPEALNY  168 (250)
T ss_pred             ccccCCCCCCcccccCHHHhcc
Confidence            2211 12234567999998754

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.87  E-value=8.2e-22  Score=168.48  Aligned_cols=154  Identities=18%  Similarity=0.237  Sum_probs=116.3

Q ss_pred             EecccCceeEEEecc-------eeEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         83 KLGWGHFSTVWFTGS-------KTQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~-------~~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .||+|+||.||+|.+       ..++++....      .+.+..|+.+++.+.|        ++++++++.+     ...
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~-----~~~   68 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN--------PYIVRMIGIC-----EAE   68 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC--------CCcceEEEEE-----cCC
Confidence            589999999999854       2244443221      2456788999999988        6688887754     345


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ..++||||+ +++|.+++....  .+++..+..++.|++.||.|||.+ ||+||||||.||+++. ++.++++|||++..
T Consensus        69 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~-~~~~kl~Dfg~~~~  144 (257)
T cd05116          69 SWMLVMELAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVT-QHYAKISDFGLSKA  144 (257)
T ss_pred             CcEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcC-CCeEEECCCccccc
Confidence            678999999 566777775443  589999999999999999999999 9999999999999955 47899999999876


Q ss_pred             hhhCCCC---CCcccCCCCccchhhhhh
Q psy16752        229 AATGHKL---PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       229 ~~~~~~~---~~~~~gt~~~~aPE~l~~  253 (284)
                      .......   .....++..|+|||.+..
T Consensus       145 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05116         145 LGADENYYKAKTHGKWPVKWYAPECMNY  172 (257)
T ss_pred             cCCCCCeeeecCCCCCCccccCHhHhcc
Confidence            5443221   112234578999997743

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.87  E-value=9.8e-22  Score=170.36  Aligned_cols=156  Identities=20%  Similarity=0.270  Sum_probs=114.1

Q ss_pred             EecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         83 KLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      .||+|+||.||++.+.     .+++.....       ......|..++..+...     .|++++.++..+.    ....
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~----~~~~   71 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-----DCPFIVCMTYAFH----TPDK   71 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhC-----CCCcEeEEEEEEe----cCCe
Confidence            4899999999998763     233432211       12234454444444321     1366888777666    6678


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      .++||||+ +++|...+....  .+++..+..++.|++.||.|||+. +|+||||||+|||++. .+.++++|||++...
T Consensus        72 ~~lv~e~~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~-~~~~~l~dfg~~~~~  147 (279)
T cd05633          72 LCFILDLMNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDE-HGHVRISDLGLACDF  147 (279)
T ss_pred             EEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECC-CCCEEEccCCcceec
Confidence            99999999 566666665443  589999999999999999999999 9999999999999954 479999999988644


Q ss_pred             hhCCCCCCcccCCCCccchhhhhh
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ...  ......||++|+|||++..
T Consensus       148 ~~~--~~~~~~~~~~y~aPE~~~~  169 (279)
T cd05633         148 SKK--KPHASVGTHGYMAPEVLQK  169 (279)
T ss_pred             ccc--CccCcCCCcCccCHHHhcC
Confidence            332  2234579999999999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.87  E-value=1.1e-21  Score=169.82  Aligned_cols=162  Identities=25%  Similarity=0.366  Sum_probs=128.4

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |.+.+.||.|+||.||+|.+.     .+++....      ....+.+|+.+++.+.|        ++++++++.+.    
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----   68 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRH--------PNIVRLKEIVT----   68 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccC--------CCeeeheeeEe----
Confidence            678999999999999999763     23333222      23457789999999988        66888888765    


Q ss_pred             CC--eEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        147 NG--THVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       147 ~~--~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      ..  ...++||||+++++...+.... ..+++..+..++.||+.||.|||.. |++|+||+|+||+++. ++.++++|||
T Consensus        69 ~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~-~~~~~l~d~g  145 (287)
T cd07840          69 SKGKGSIYMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINN-DGVLKLADFG  145 (287)
T ss_pred             cCCCCcEEEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcC-CCCEEEcccc
Confidence            33  7899999999888888876653 3589999999999999999999999 9999999999999955 5899999999


Q ss_pred             chhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+........ ......++..|+|||.+.+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  176 (287)
T cd07840         146 LARPYTKRNSADYTNRVITLWYRPPELLLGA  176 (287)
T ss_pred             ceeeccCCCcccccccccccccCCceeeEcc
Confidence            8876654432 12234578889999987653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=1.2e-21  Score=168.65  Aligned_cols=162  Identities=19%  Similarity=0.229  Sum_probs=126.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC--------------CChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ--------------FPETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~--------------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      +|.+.+.||.|+||.||+|...     .+++....              ..+.+..|+.+++.++|        ++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~   73 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH--------LNIVQY   73 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC--------CCcceE
Confidence            4889999999999999999652     23332211              01245678899999987        668888


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~  216 (284)
                      ++.+.    ....+++||||+ +++|.+.+....  .+++..+..++.||+.||.|||+. +++||||+|+||+++. .+
T Consensus        74 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil~~~-~~  145 (272)
T cd06629          74 LGFET----TEEYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLLVDA-DG  145 (272)
T ss_pred             EEEec----cCCceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEEEcC-CC
Confidence            88665    677899999999 677777776543  589999999999999999999999 9999999999999954 58


Q ss_pred             cEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++++|||++........  ......|+..|+|||++...
T Consensus       146 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  185 (272)
T cd06629         146 ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSY  185 (272)
T ss_pred             eEEEeeccccccccccccccccccccCCccccCHHHhccc
Confidence            999999998875432211  12345688899999987654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.87  E-value=5.2e-22  Score=170.06  Aligned_cols=161  Identities=21%  Similarity=0.324  Sum_probs=128.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|++.+.||.|+||.||+|.++     .+++....     ....+.+|+.+++.+.|        ++++++++.+.    
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~----   69 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNS--------PYIVGFYGAFY----   69 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCC--------Cchhhhheeee----
Confidence            5888899999999999999874     23333221     22456789999998887        66888888776    


Q ss_pred             CCeEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        147 NGTHVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      ....++++|||++ ++|.+.+.... ..+++..+..++.|++.||.|||+ . |++|+||+|+||+++. .+.++++|||
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~-~~~~~l~d~g  146 (265)
T cd06605          70 NNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNS-RGQIKLCDFG  146 (265)
T ss_pred             cCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECC-CCCEEEeecc
Confidence            6688999999995 67777666543 458999999999999999999999 8 9999999999999965 5889999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+.........  ...+++.|++||.+.+.
T Consensus       147 ~~~~~~~~~~~--~~~~~~~y~~PE~~~~~  174 (265)
T cd06605         147 VSGQLVNSLAK--TFVGTSSYMAPERIQGN  174 (265)
T ss_pred             cchhhHHHHhh--cccCChhccCHHHHcCC
Confidence            98766543222  26788999999987554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.1e-21  Score=167.62  Aligned_cols=155  Identities=22%  Similarity=0.300  Sum_probs=118.3

Q ss_pred             EEecccCceeEEEecc--------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGS--------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~--------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||+|+||.||+|.+        ..+++.....     ...+..|+.+++.+.|        ++++++++.+.     .
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~-----~   67 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH--------PCIVRLIGVCK-----G   67 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC--------CCeeeEEEEEc-----C
Confidence            3689999999999864        1233433222     2356789999999988        66888887543     4


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...++||||+ +++|.+.+....  .+++..+..++.|++.||.|||.. +++|+||||+|||++. .+.++++|||.+.
T Consensus        68 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~-~~~~kl~df~~~~  143 (257)
T cd05060          68 EPLMLVMELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVN-RHQAKISDFGMSR  143 (257)
T ss_pred             CceEEEEEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcC-CCcEEeccccccc
Confidence            4679999998 678888876654  589999999999999999999999 9999999999999955 4899999999987


Q ss_pred             HhhhCCCCCC---cccCCCCccchhhhhh
Q psy16752        228 LAATGHKLPV---SFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~~~---~~~gt~~~~aPE~l~~  253 (284)
                      ..........   ...++..|+|||.+.+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05060         144 ALGAGSDYYRATTAGRWPLKWYAPECINY  172 (257)
T ss_pred             eeecCCcccccccCccccccccCHHHhcC
Confidence            6544332211   2224567999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.87  E-value=1.2e-21  Score=169.42  Aligned_cols=162  Identities=30%  Similarity=0.473  Sum_probs=130.2

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |++.+.||.|++|.||+|.+.     .+++....      ....+.+|+.+++.++|        ++++++++.+.    
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----   68 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH--------PNIIKLLDVFR----   68 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC--------CCcchHHHhhc----
Confidence            567889999999999999763     23333211      23457789999999987        66888888776    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....+++||||+++++.+.+.... ..+++..+..++.||+.||.|||.. +|+|+||+|+||+++. ++.++++|||.+
T Consensus        69 ~~~~~~~v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~-~~~~~l~df~~~  145 (283)
T cd05118          69 HKGDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINT-EGVLKLADFGLA  145 (283)
T ss_pred             cCCCEEEEEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECC-CCcEEEeeeeee
Confidence            668899999999889988887654 3589999999999999999999999 9999999999999954 489999999988


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..............++..|+|||.+.+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~  173 (283)
T cd05118         146 RSFGSPVRPYTHYVVTRWYRAPELLLGD  173 (283)
T ss_pred             EecCCCcccccCccCcccccCcHHHhcC
Confidence            7665543223345678899999998654

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.9e-21  Score=165.13  Aligned_cols=162  Identities=23%  Similarity=0.310  Sum_probs=129.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++...||+|++|.||++.+.     +.++....      ....+.+|+.++.+++|        ++++++++.+.   
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~---   69 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH--------PNIVKYIGSIE---   69 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC--------CCccEEEEEEE---
Confidence            4889999999999999998652     23333222      22457789999999987        56888877665   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....+++|||+ +++|.+.+...  ..+++..+..++.|++.||.|||+. ||+||||+|+||+++. .+.++|+|||
T Consensus        70 -~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~-~~~~~l~d~~  144 (254)
T cd06627          70 -TSDSLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTK-DGVVKLADFG  144 (254)
T ss_pred             -eCCEEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECC-CCCEEEeccc
Confidence             567899999999 55777666554  3589999999999999999999999 9999999999999965 5899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+..............++..|++||.+.+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  174 (254)
T cd06627         145 VATKLNDVSKDDASVVGTPYWMAPEVIEMS  174 (254)
T ss_pred             cceecCCCcccccccccchhhcCHhhhcCC
Confidence            988766554434456789999999987554

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.87  E-value=1.5e-21  Score=173.15  Aligned_cols=160  Identities=24%  Similarity=0.407  Sum_probs=126.1

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++.+.||.|+||.||+|.+.     .++|...      ...+.+..|+.+++.++|        ++++++++.+. 
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~-   79 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH--------ENIISLSDIFI-   79 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCC--------CCeeeEeeeEe-
Confidence            467999999999999999999753     2444321      123567789999999998        66888887664 


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ......|++|||+++++...+...   .+++..+..++.|++.||.|||+. +|+||||+|.||+++ +.+.++++||
T Consensus        80 --~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~-~~~~~~l~df  152 (328)
T cd07856          80 --SPLEDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILIN-ENCDLKICDF  152 (328)
T ss_pred             --cCCCcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeEC-CCCCEEeCcc
Confidence              134578999999988887766533   488899999999999999999999 999999999999995 4589999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |.+.....   ...+..+++.|+|||.+.+
T Consensus       153 g~~~~~~~---~~~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         153 GLARIQDP---QMTGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             ccccccCC---CcCCCcccccccCceeeec
Confidence            98864322   2234567888999998754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.87  E-value=3.6e-22  Score=173.26  Aligned_cols=160  Identities=23%  Similarity=0.368  Sum_probs=125.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++++.||+|+||+||++.+.     .++++.     ......+.+|+.+++.++|        ++++++++.+.   
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~---   73 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS--------PYIVSFYGAFL---   73 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC--------CCcceEeeeEe---
Confidence            46999999999999999998763     233321     1223567889999999988        66999988776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                       ....+|+||||+ +++|...+...  +.+++..+..++.+++.||.|||+ . +++||||+|+||+++ +.+.++++||
T Consensus        74 -~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~-~i~H~dl~p~nil~~-~~~~~~l~d~  148 (284)
T cd06620          74 -NENNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVH-RIMHRDIKPSNILVN-SRGQIKLCDF  148 (284)
T ss_pred             -cCCEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhc-CeeccCCCHHHEEEC-CCCcEEEccC
Confidence             668899999999 45665555443  358999999999999999999997 6 899999999999995 4589999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |++......  ......|+..|+|||++.+
T Consensus       149 gl~~~~~~~--~~~~~~~~~~~~aPE~~~~  176 (284)
T cd06620         149 GVSGELINS--IADTFVGTSTYMSPERIQG  176 (284)
T ss_pred             Ccccchhhh--ccCccccCcccCCHHHHcc
Confidence            987654322  1234578999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.87  E-value=5.6e-22  Score=172.22  Aligned_cols=164  Identities=19%  Similarity=0.213  Sum_probs=124.8

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEecCC-----CChhhHHHHHHHHhhh-cCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ-----FPETALDEIKLLKCVR-DGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~-----~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|...+.||+|+||.||++.++.     +++....     ....+.+|+.++.++. |        ++++++++.+.   
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~--------~~iv~~~~~~~---   73 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC--------PYIVKFYGALF---   73 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCC--------CCEeeeeeEEe---
Confidence            47777899999999999987732     3333221     1235677888888886 5        67999988766   


Q ss_pred             cCCeEEEEEeccCCccHHHHHH---hhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIV---KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~---~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                       .....+++|||+++++.++..   ......+++..+..++.|++.||.|||+..+++||||||+||+++.+ +.++++|
T Consensus        74 -~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~-~~~kl~d  151 (288)
T cd06616          74 -REGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRN-GNIKLCD  151 (288)
T ss_pred             -cCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccC-CcEEEee
Confidence             567789999999876655432   22234589999999999999999999973389999999999999554 7899999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++....... ......|+.+|+|||++.+.
T Consensus       152 fg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  182 (288)
T cd06616         152 FGISGQLVDSI-AKTRDAGCRPYMAPERIDPS  182 (288)
T ss_pred             cchhHHhccCC-ccccccCccCccCHHHhccc
Confidence            99987655432 22344689999999998654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0576|consensus

Probab=99.87  E-value=2.9e-23  Score=189.21  Aligned_cols=162  Identities=24%  Similarity=0.319  Sum_probs=137.4

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|.+++.+|.|+||.||+|+++.     ++++++-.    ...+..|+-+++.++|        +||+.+++.+.    
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h--------~nivay~gsyl----   82 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRH--------PNIVAYFGSYL----   82 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCC--------cChHHHHhhhh----
Confidence            469999999999999999999854     44443333    3446789999999998        66999999887    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....+||+||||+|+.++.+..-. +.+++.++...+++.+.||.|||++ |-+|||||=.|||+ .+.+.+++.|||.+
T Consensus        83 r~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanill-td~gDvklaDfgvs  159 (829)
T KOG0576|consen   83 RRDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILL-TDEGDVKLADFGVS  159 (829)
T ss_pred             hhcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcC-Ccccccccccceee-cccCceeecccCch
Confidence            788999999999777766665543 4699999999999999999999999 99999999999999 55699999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ......-....++.|||.|||||+-+
T Consensus       160 aqitati~KrksfiGtpywmapEvaa  185 (829)
T KOG0576|consen  160 AQITATIAKRKSFIGTPYWMAPEVAA  185 (829)
T ss_pred             hhhhhhhhhhhcccCCccccchhHHH
Confidence            88777666677899999999999963

>KOG0983|consensus

Probab=99.87  E-value=1.4e-22  Score=167.71  Aligned_cols=165  Identities=20%  Similarity=0.275  Sum_probs=125.0

Q ss_pred             ceEEEEEecccCceeEEEeccee--EEEecCC--------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT--QVLVSPQ--------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~--~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.+.+..||.|+.|+||+++.+.  .+.+++.        ...+++..+.++.....       .+.|++.+++|.    
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~d-------cpyIV~c~GyFi----  161 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHD-------CPYIVQCFGYFI----  161 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccC-------CCeeeeeeeEEe----
Confidence            35677889999999999998865  2222222        23445555555544332       266999999887    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....++|.||.+.--...++.+- .+++++..+-.+...++.||.||..+-||+|||+||+|||+ ++.+.+|+||||.+
T Consensus       162 ~n~dV~IcMelMs~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl-De~GniKlCDFGIs  239 (391)
T KOG0983|consen  162 TNTDVFICMELMSTCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL-DERGNIKLCDFGIS  239 (391)
T ss_pred             eCchHHHHHHHHHHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE-ccCCCEEeeccccc
Confidence            77888999998855444444443 45699999999999999999999876589999999999999 45599999999999


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      .+..... ......|.|+|||||.+.-.-
T Consensus       240 GrlvdSk-AhtrsAGC~~YMaPERidp~~  267 (391)
T KOG0983|consen  240 GRLVDSK-AHTRSAGCAAYMAPERIDPPD  267 (391)
T ss_pred             ceeeccc-ccccccCCccccCccccCCCC
Confidence            8776652 333457999999999987654

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.87  E-value=1.5e-21  Score=168.16  Aligned_cols=155  Identities=17%  Similarity=0.226  Sum_probs=116.1

Q ss_pred             EecccCceeEEEecce-------eEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEeccCCe
Q psy16752         83 KLGWGHFSTVWFTGSK-------TQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~-------~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .||+|+||.||+|..+       .+++.....     .+.+..|+.++.++ .|        ++++++++.+.    ...
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~~iv~~~~~~~----~~~   69 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--------PNIINLLGACE----HRG   69 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccC--------CCeeeEEEEEe----cCC
Confidence            6899999999999752       133333321     23566799999998 45        77999888776    667


Q ss_pred             EEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      .+|+||||+ +++|.+++....              ...+++..+..++.|++.||.|||+. |++||||||+||+++. 
T Consensus        70 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nili~~-  147 (270)
T cd05047          70 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGE-  147 (270)
T ss_pred             CceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceEEEcC-
Confidence            789999999 678888876532              12378999999999999999999999 9999999999999954 


Q ss_pred             CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        215 EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      .+.++++|||++...... ........+..|+|||++.
T Consensus       148 ~~~~kl~dfgl~~~~~~~-~~~~~~~~~~~y~apE~~~  184 (270)
T cd05047         148 NYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLN  184 (270)
T ss_pred             CCeEEECCCCCccccchh-hhccCCCCccccCChHHHc
Confidence            489999999987532211 0111223355699999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=1.5e-21  Score=168.74  Aligned_cols=165  Identities=20%  Similarity=0.259  Sum_probs=125.6

Q ss_pred             cceEEEEEecccCceeEEEecce---------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+|++.+.||+|+||.||+|...         .++++....     ...+.+|+.+++.+.|        ++++++++++
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~--------~~i~~~~~~~   75 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH--------ENIVKYKGVC   75 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC--------CChheEEeee
Confidence            35889999999999999999742         244443322     3467889999999988        6688887765


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .  .......++||||+ ++++.+++.... ..+++..+..++.||+.||.|||+. |++|+||||+||+++.+ +.+++
T Consensus        76 ~--~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~-~~~~l  150 (284)
T cd05038          76 E--KPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESE-DLVKI  150 (284)
T ss_pred             e--cCCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCC-CCEEE
Confidence            4  12366799999999 678877776543 2489999999999999999999999 99999999999999655 89999


Q ss_pred             EeccchhHhhhCCCCC---CcccCCCCccchhhhhh
Q psy16752        221 LALNATELAATGHKLP---VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~---~~~~gt~~~~aPE~l~~  253 (284)
                      +|||.+..........   ....++..|++||.+.+
T Consensus       151 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~  186 (284)
T cd05038         151 SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRT  186 (284)
T ss_pred             cccccccccccCCcceeccCCCCCcccccCcHHHcc
Confidence            9999988765332211   11234455888887643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.87  E-value=1.4e-21  Score=167.34  Aligned_cols=153  Identities=24%  Similarity=0.337  Sum_probs=123.0

Q ss_pred             ecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ||.|+||.||+|.+.     .++++...       ..+.+..|+.+++.++|        ++++++++.+.    ....+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~~~~   68 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH--------PFIVKLYRTFK----DKKYI   68 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC--------CCEeeeeeeEE----cCCcc
Confidence            699999999999874     24443321       23457789999999988        66888888766    67789


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |+||||+ +++|.+.+.+..  .+++..+..++.||+.||.|||+. +++|+||+|+||+++.+ +.++++|||++....
T Consensus        69 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~-~~~~l~df~~~~~~~  144 (262)
T cd05572          69 YMLMEYCLGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSN-GYVKLVDFGFAKKLK  144 (262)
T ss_pred             EEEEecCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCC-CCEEEeeCCcccccC
Confidence            9999998 678877776543  489999999999999999999999 99999999999999554 899999999987665


Q ss_pred             hCCCCCCcccCCCCccchhhhhh
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ... ......+++.|++||.+.+
T Consensus       145 ~~~-~~~~~~~~~~~~~PE~~~~  166 (262)
T cd05572         145 SGQ-KTWTFCGTPEYVAPEIILN  166 (262)
T ss_pred             ccc-ccccccCCcCccChhHhcC
Confidence            432 2334578999999998754

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.87  E-value=1.2e-21  Score=172.83  Aligned_cols=157  Identities=22%  Similarity=0.332  Sum_probs=126.2

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .|...+.||+|+||.||++.+.     .+++....       ....+..|+.+++.+.|        ++++++++.+.  
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~--   95 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH--------PNSIEYKGCYL--   95 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC--------CCEEEEEEEEe--
Confidence            4888999999999999999762     23443221       11346789999999988        66888888766  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        .....++||||+.|++.+.+.... ..+++..+..++.|++.||.|||.. +|+||||+|+||+++. ++.++++|||
T Consensus        96 --~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~-~~~~kl~dfg  170 (317)
T cd06635          96 --REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTE-PGQVKLADFG  170 (317)
T ss_pred             --eCCeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECC-CCCEEEecCC
Confidence              677899999999888888776543 3589999999999999999999999 9999999999999954 5899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ++.....    .....|++.|+|||.+.
T Consensus       171 ~~~~~~~----~~~~~~~~~y~aPE~~~  194 (317)
T cd06635         171 SASIASP----ANSFVGTPYWMAPEVIL  194 (317)
T ss_pred             CccccCC----cccccCCccccChhhhh
Confidence            8764432    23456888999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.87  E-value=3.4e-21  Score=163.01  Aligned_cols=162  Identities=22%  Similarity=0.381  Sum_probs=130.2

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      +|.+.+.||+|++|.||++.+.     ..++....    ....+.+|+.+++.+.|        ++++++++.+.    .
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----~   68 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH--------PNIVKYYGSYL----K   68 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC--------CCEeEEEEEEe----c
Confidence            3889999999999999999863     23333322    23567889999999987        66888888766    6


Q ss_pred             CeEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....++++||++ ++|.+.+.... ..+++..+..++.|++.||.+||.. |++|+||+|+||+++. ++.++|+|||.+
T Consensus        69 ~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~-~~~~~l~d~~~~  145 (253)
T cd05122          69 KDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTS-DGEVKLIDFGLS  145 (253)
T ss_pred             CCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEcc-CCeEEEeecccc
Confidence            678999999995 67766665543 4589999999999999999999999 9999999999999955 589999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ........ .....++..|++||.+.+.
T Consensus       146 ~~~~~~~~-~~~~~~~~~~~~PE~~~~~  172 (253)
T cd05122         146 AQLSDTKA-RNTMVGTPYWMAPEVINGK  172 (253)
T ss_pred             cccccccc-ccceecCCcccCHHHHcCC
Confidence            77665432 3456789999999987543

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.87  E-value=2.7e-21  Score=167.02  Aligned_cols=162  Identities=28%  Similarity=0.382  Sum_probs=129.9

Q ss_pred             eEEEEEecccCceeEEEeccee-----EEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT-----QVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |++...||+|++|.||+|....     +++...      ...+.+..|+.+++.+.|        ++++++++.+.    
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~--------~~i~~~~~~~~----   68 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH--------PNIVKLLDVIH----   68 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC--------CCHHHHHhhhh----
Confidence            6678899999999999997732     333322      223456789999999987        66888888776    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      .....++||||++++|.+.+.+.. ..+++..+..++.|++.||.|||.. ||+||||+|+||+++. .+.++|+|||.+
T Consensus        69 ~~~~~~~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~-~~~~~l~d~g~~  145 (282)
T cd07829          69 TERKLYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINR-DGVLKLADFGLA  145 (282)
T ss_pred             cCCceEEEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcC-CCCEEEecCCcc
Confidence            668899999999889988887753 3499999999999999999999999 9999999999999955 589999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..............++..|+|||.+.+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~  173 (282)
T cd07829         146 RAFGIPLRTYTHEVVTLWYRAPEILLGS  173 (282)
T ss_pred             cccCCCccccCccccCcCcCChHHhcCC
Confidence            7655443333344567889999988554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=4.8e-21  Score=166.50  Aligned_cols=164  Identities=22%  Similarity=0.299  Sum_probs=126.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|...+.||.|++|.||+|.+.     .+++....     ....+.+|+++++.++|        ++|+++++.+.  ..
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~--~~   71 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKS--------PYIVKYYGAFL--DE   71 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCC--------CCeeeeeeEEE--cc
Confidence            5999999999999999999873     23333322     23457889999999988        66888887653  12


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      ....+|+||||+ +++|.+.+...  ....+++..+..++.||+.||.|||+. |++|+||+|+||+++.+ +.++++||
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~-~~~~l~df  149 (287)
T cd06621          72 SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRK-GQVKLCDF  149 (287)
T ss_pred             CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecC-CeEEEeec
Confidence            345789999999 66776665432  224588999999999999999999999 99999999999999554 78999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.......  .....++..|++||.+.+.
T Consensus       150 g~~~~~~~~~--~~~~~~~~~y~~pE~~~~~  178 (287)
T cd06621         150 GVSGELVNSL--AGTFTGTSFYMAPERIQGK  178 (287)
T ss_pred             cccccccccc--cccccCCccccCHHHhcCC
Confidence            9976544321  2245678889999987543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.86  E-value=2.8e-21  Score=170.25  Aligned_cols=157  Identities=22%  Similarity=0.305  Sum_probs=125.9

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .|...+.||+|+||+||+|.+.     .+++....       ....+..|+.+++.++|        ++++++++.+.  
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~--   91 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH--------PNTIEYKGCYL--   91 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC--------CCCccEEEEEE--
Confidence            4777889999999999999762     23333221       11346789999999988        66888888776  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        .....|+||||+.+++.+.+.... ..+++..+..++.||+.||.|||+. |++|+||+|+||+++. ++.++++|||
T Consensus        92 --~~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~-~~~~kL~dfg  166 (313)
T cd06633          92 --KEHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTE-PGQVKLADFG  166 (313)
T ss_pred             --eCCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECC-CCCEEEeecC
Confidence              678899999999888888876644 3589999999999999999999999 9999999999999954 4789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ++....    ......|+..|+|||++.
T Consensus       167 ~~~~~~----~~~~~~~~~~y~aPE~~~  190 (313)
T cd06633         167 SASKSS----PANSFVGTPYWMAPEVIL  190 (313)
T ss_pred             CCcccC----CCCCccccccccChhhcc
Confidence            875432    223567889999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.86  E-value=3.7e-21  Score=166.62  Aligned_cols=169  Identities=26%  Similarity=0.414  Sum_probs=127.1

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |++...||.|+||.||+|.++     .+++....      ....+.+|+.+++++...+     |++++++++.+.....
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-----h~~i~~~~~~~~~~~~   75 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFE-----HPNIVRLLDVCHGPRT   75 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccC-----CCCcceEEEEEeeccC
Confidence            678999999999999999873     23443321      1234567888887775211     2678888887662221


Q ss_pred             -CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 -NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 -~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....++++|||+.+++.+.+.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.+ +.++++|||.
T Consensus        76 ~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~-~~~~l~dfg~  153 (287)
T cd07838          76 DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSD-GQVKIADFGL  153 (287)
T ss_pred             CCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccC-CCEEEeccCc
Confidence             22349999999988888887765444589999999999999999999999 99999999999999665 8999999998


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +....... ......++..|+|||++.+.
T Consensus       154 ~~~~~~~~-~~~~~~~~~~~~~PE~~~~~  181 (287)
T cd07838         154 ARIYSFEM-ALTSVVVTLWYRAPEVLLQS  181 (287)
T ss_pred             ceeccCCc-ccccccccccccChHHhccC
Confidence            87654332 22344578899999987543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.86  E-value=2.1e-21  Score=168.74  Aligned_cols=161  Identities=21%  Similarity=0.306  Sum_probs=127.1

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .|.....||.|++|.||++.+.     .+++....    ..+.+.+|+.+++.+.|        ++++++++.+.    .
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h--------~~vv~~~~~~~----~   87 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH--------PNIVEMYSSYL----V   87 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC--------CChheEEEEEE----c
Confidence            4666789999999999999753     23333211    22346789999999887        66999888766    6


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ..+.|+++||+ +++|.+.+..   ..+++..+..++.|++.||.|||+. |++||||+|+||+++. ++.++++|||.+
T Consensus        88 ~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~-~~~~~l~d~g~~  162 (285)
T cd06648          88 GDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTS-DGRVKLSDFGFC  162 (285)
T ss_pred             CCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcC-CCcEEEcccccc
Confidence            77899999999 6677776655   2489999999999999999999999 9999999999999954 489999999987


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..............|++.|+|||++.+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~  190 (285)
T cd06648         163 AQVSKEVPRRKSLVGTPYWMAPEVISRL  190 (285)
T ss_pred             hhhccCCcccccccCCccccCHHHhcCC
Confidence            7655443333456789999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG1165|consensus

Probab=99.86  E-value=2.4e-21  Score=164.40  Aligned_cols=171  Identities=21%  Similarity=0.354  Sum_probs=137.9

Q ss_pred             cceEEEEEecccCceeEEEecc-----eeEEEec--CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS-----KTQVLVS--PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      -.|++.++||+|+||+++.+.+     .+++|..  +.....+..|.+.++.|.+.       ++|.++|.    +++++
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~-------~GIP~vYY----FGqeG   96 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGT-------EGIPQVYY----FGQEG   96 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCC-------CCCCceee----ecccc
Confidence            3699999999999999999986     2355443  33345578899999999863       66776665    45688


Q ss_pred             eEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC----CCcEEEEecc
Q psy16752        149 THVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD----EARVKTLALN  224 (284)
Q Consensus       149 ~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~----~~~v~l~Dfg  224 (284)
                      .+-.+|||++|.+|.+++..+. ++|+.+.++.++.|++.-++|+|++ .+|.|||||+|+||...    ...|.++|||
T Consensus        97 ~~NiLVidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG  174 (449)
T KOG1165|consen   97 KYNILVIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKDANVIHIIDFG  174 (449)
T ss_pred             chhhhhhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCCCceEEEEecc
Confidence            8899999999999999998876 5699999999999999999999999 99999999999999643    4589999999


Q ss_pred             chhHhhhCCCC-------CCcccCCCCccchhhhhhccchhhHHH
Q psy16752        225 ATELAATGHKL-------PVSFCSTAPVQEYSELSRRMSKNKKKK  262 (284)
Q Consensus       225 ~a~~~~~~~~~-------~~~~~gt~~~~aPE~l~~~~~~~~~~~  262 (284)
                      +|+...++...       ..+..||+.||   .++..+...+.++
T Consensus       175 mAK~YrDp~TkqHIPYrE~KSLsGTARYM---SINTHlGrEQSRR  216 (449)
T KOG1165|consen  175 MAKEYRDPKTKQHIPYREHKSLSGTARYM---SINTHLGREQSRR  216 (449)
T ss_pred             chhhhcCccccccCccccccccccceeee---Eeeccccchhhhh
Confidence            99977665432       23668999999   4666666655544

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.86  E-value=1.5e-21  Score=169.43  Aligned_cols=164  Identities=23%  Similarity=0.350  Sum_probs=131.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      ..|++...||.|+||.||+|.+.     .++++....   ...+..|+.+++.++|        ++++++++.+.    .
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----~   86 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH--------PNIVDYYDSYL----V   86 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC--------CCeeEEEEEEE----E
Confidence            35899999999999999999874     234433222   3467889999999988        66888888776    5


Q ss_pred             CeEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....|+|+||+. ++|.+.+.... ..+++..+..++.|++.||.|||+. |++|+||+|+||+++. ++.++|+|||++
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~-~~~~~l~d~~~~  163 (286)
T cd06614          87 GDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSK-DGSVKLADFGFA  163 (286)
T ss_pred             CCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcC-CCCEEECccchh
Confidence            688999999995 77777776653 3589999999999999999999999 9999999999999964 489999999988


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..............+++.|++||.+.+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~  191 (286)
T cd06614         164 AQLTKEKSKRNSVVGTPYWMAPEVIKRK  191 (286)
T ss_pred             hhhccchhhhccccCCcccCCHhHhcCC
Confidence            7655443333455688999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG4257|consensus

Probab=99.86  E-value=6.4e-22  Score=179.42  Aligned_cols=161  Identities=20%  Similarity=0.277  Sum_probs=130.5

Q ss_pred             ceEEEEEecccCceeEEEecce---------eEEEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK---------TQVLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ...+.+.||.|-||.||.|.+.         +++|..     ....+.++.|..+|+.++|        |||+++++.+.
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdH--------phIikLIGv~~  461 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDH--------PHIIKLIGVCV  461 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCC--------cchhheeeeee
Confidence            3455678999999999999762         233322     2235778999999999999        77999999874


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                           ....|||||++ -|.|..++..+.. .++...+..++.||+.||.|||+. .+|||||...|||+.+. ..||++
T Consensus       462 -----e~P~WivmEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp-~CVKLa  533 (974)
T KOG4257|consen  462 -----EQPMWIVMELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSP-QCVKLA  533 (974)
T ss_pred             -----ccceeEEEecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCc-ceeeec
Confidence                 66799999999 6788888877654 599999999999999999999999 99999999999999655 799999


Q ss_pred             eccchhHhhhCCCCCCcccCCC--Cccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTA--PVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~--~~~aPE~l~~~  254 (284)
                      |||++++.....-...+ .|..  -|||||.++.+
T Consensus       534 DFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfR  567 (974)
T KOG4257|consen  534 DFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFR  567 (974)
T ss_pred             ccchhhhccccchhhcc-ccccceeecCccccchh
Confidence            99999988776544443 3433  49999998754

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.86  E-value=1.8e-21  Score=172.54  Aligned_cols=158  Identities=20%  Similarity=0.264  Sum_probs=118.9

Q ss_pred             Eeccc--CceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         83 KLGWG--HFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        83 ~LG~G--~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .||+|  +||+||+|.+.     +++++....      .+.+.+|+.+++.++|        +||+++++.|.    ...
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h--------~niv~~~~~~~----~~~   72 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH--------PNIMTSWTVFT----TGS   72 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC--------CCcceEeeeEe----cCC
Confidence            45666  99999999773     244443221      2446678888888887        66999999887    677


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ ++++.+.+.+.....+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++++||+.+..
T Consensus        73 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~-~~~~~~~~~~~~~  150 (328)
T cd08226          73 WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGD-GLVSLSGLSHLYS  150 (328)
T ss_pred             ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCC-CcEEEechHHHhh
Confidence            899999999 56777777665444589999999999999999999999 99999999999999654 8999999986554


Q ss_pred             hhhCCCC-------CCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKL-------PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~-------~~~~~gt~~~~aPE~l~~~  254 (284)
                      .......       .....++.+|+|||++.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (328)
T cd08226         151 LVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQD  183 (328)
T ss_pred             hhccCccccccccccccccCccCccChhhhcCC
Confidence            3322111       1122456789999998653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.86  E-value=3.3e-21  Score=164.60  Aligned_cols=155  Identities=22%  Similarity=0.355  Sum_probs=121.9

Q ss_pred             ecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ||.|+||.||+|.+.     .++++...       ....+.+|+.+++.++|        ++++++++.+.    .....
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h--------~~i~~~~~~~~----~~~~~   68 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS--------PYVVKLYYSFQ----GKKNL   68 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC--------cchhHHHHhee----cCcEE
Confidence            689999999999873     24444322       23456778889999888        66888888776    78889


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |++|||+ +++|.+.+.+..  .+++..+..++.||+.||.|||.. |++|+||+|+||+++.+ +.++++|||++....
T Consensus        69 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~-~~~~l~dfg~~~~~~  144 (265)
T cd05579          69 YLVMEYLPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSN-GHLKLTDFGLSKVGL  144 (265)
T ss_pred             EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCC-CCEEEEecccchhcc
Confidence            9999999 567777766543  589999999999999999999999 99999999999999654 899999999887654


Q ss_pred             hCCC--------CCCcccCCCCccchhhhhhc
Q psy16752        231 TGHK--------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       231 ~~~~--------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ....        ......+++.|++||.+.+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~  176 (265)
T cd05579         145 VRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ  176 (265)
T ss_pred             cCcccccccccccccCcccCccccCHHHhcCC
Confidence            4321        22345678889999976543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0603|consensus

Probab=99.86  E-value=6.9e-22  Score=179.94  Aligned_cols=160  Identities=23%  Similarity=0.338  Sum_probs=131.9

Q ss_pred             ccceEEEEEecccCceeEEEeccee-----EEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      ...|.+...+|.|+|+.|-.+.+..     ++++.........+|+.++.....       |+|++++.+.+.    ...
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~-------h~niv~~~~v~~----~~~  389 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRD-------HPNIVKSHDVYE----DGK  389 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcC-------CCcceeecceec----CCc
Confidence            3568999999999999998887633     556665556667788877777665       488999999887    889


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ++|+|||.+ ++.+++.+....   .....+..|+.+|+.|+.|||.+ |||||||||+|||+..+.++++|+|||.++.
T Consensus       390 ~~~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~  465 (612)
T KOG0603|consen  390 EIYLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE  465 (612)
T ss_pred             eeeeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence            999999999 667777776654   33377788999999999999999 9999999999999964558999999999886


Q ss_pred             hhhCCCCCCcccCCCCccchhhhh
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ....   ..+.|+|..|.|||++.
T Consensus       466 ~~~~---~~tp~~t~~y~APEvl~  486 (612)
T KOG0603|consen  466 LERS---CDTPALTLQYVAPEVLA  486 (612)
T ss_pred             Cchh---hcccchhhcccChhhhc
Confidence            6654   45678999999999987

>KOG1006|consensus

Probab=99.86  E-value=7.3e-23  Score=168.76  Aligned_cols=165  Identities=19%  Similarity=0.203  Sum_probs=124.8

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEe-----cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLV-----SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.+-+..||.|+||+|++-.++.     ++|.     .....+.++.|..+..+-..       .++|+++|++..    
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~-------cp~IVkfyGa~F----  133 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSN-------CPNIVKFYGALF----  133 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcC-------CcHHHHHhhhhh----
Confidence            45667889999999999876643     2322     22234556666665444333       488999999877    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKS---KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      .....||.||+|.-++..+...-   ....+++..+-.+..-.+.||+||-....|||||+||+|||++.. +.+|||||
T Consensus       134 ~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~-G~vKLCDF  212 (361)
T KOG1006|consen  134 SEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRH-GDVKLCDF  212 (361)
T ss_pred             cCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecC-CCEeeecc
Confidence            67789999999988777665541   234589999999999999999999887689999999999999555 89999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |.+......-.. ..-.|.-||||||.+...
T Consensus       213 GIcGqLv~SiAk-T~daGCrpYmAPERi~p~  242 (361)
T KOG1006|consen  213 GICGQLVDSIAK-TVDAGCRPYMAPERIDPS  242 (361)
T ss_pred             cchHhHHHHHHh-hhccCCccccChhccCCc
Confidence            999877654221 234699999999998654

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.86  E-value=3.6e-21  Score=164.70  Aligned_cols=156  Identities=18%  Similarity=0.186  Sum_probs=114.9

Q ss_pred             EecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         83 KLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .||+|+||.||+|.+.        .+++.....     ...+.+|+.+++.++|        ++++++++.+.   ....
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~---~~~~   70 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSH--------PNVLSLLGICL---PSEG   70 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCC--------CCcceEEEEee---cCCC
Confidence            6899999999998742        233433221     2356678888988888        66888877432   1345


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ..++||||+ +++|.+++.... ...++..+..++.||+.||.|||+. +++||||||+|||++. .+.++++|||++..
T Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~-~~~~kl~dfg~~~~  147 (262)
T cd05058          71 SPLVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDE-SFTVKVADFGLARD  147 (262)
T ss_pred             CcEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcC-CCcEEECCcccccc
Confidence            678999999 677777776543 3467888899999999999999999 9999999999999955 47899999998865


Q ss_pred             hhhCCC----CCCcccCCCCccchhhhh
Q psy16752        229 AATGHK----LPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       229 ~~~~~~----~~~~~~gt~~~~aPE~l~  252 (284)
                      ......    ......+++.|+|||.+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  175 (262)
T cd05058         148 IYDKEYYSVHNHTGAKLPVKWMALESLQ  175 (262)
T ss_pred             ccCCcceeecccccCcCCccccChhHhc
Confidence            432211    111334567799999764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.86  E-value=8.7e-21  Score=161.44  Aligned_cols=162  Identities=27%  Similarity=0.411  Sum_probs=128.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|+||.||++.+.     .+++...      .....+.+|+.+++.++|        ++++++++.+.   
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~---   69 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH--------PNIISYKEAFL---   69 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC--------CCchhhhhhhc---
Confidence            4899999999999999998652     2333322      112355678899999887        66888888776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                       .....|+||||+ +++|.+.+.+..  ...+++..+..++.|++.||.|||+. |++|+||+|.||+++. .+.++++|
T Consensus        70 -~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~-~~~~kl~d  146 (256)
T cd08530          70 -DGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVA-NDLVKIGD  146 (256)
T ss_pred             -cCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEec-CCcEEEee
Confidence             668899999999 667777776521  23589999999999999999999999 9999999999999965 48899999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++......  ......+++.|++||.+.+.
T Consensus       147 ~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~  176 (256)
T cd08530         147 LGISKVLKKN--MAKTQIGTPHYMAPEVWKGR  176 (256)
T ss_pred             ccchhhhccC--CcccccCCccccCHHHHCCC
Confidence            9998776554  22345688899999998654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG1164|consensus

Probab=99.86  E-value=7.1e-21  Score=168.44  Aligned_cols=165  Identities=24%  Similarity=0.291  Sum_probs=124.5

Q ss_pred             ceEEEEEecccCceeEEEecce------eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK------TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~------~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +|.+.+.||+|+||.||+|.+.      .++++....    ...+..|+.++..+..    ..+..++..+++...   .
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~----~~~~~~~~~~~~~G~---~   91 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK----KNGPSHFPKLLDHGR---S   91 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh----hcCCCCCCEEEEecc---C
Confidence            6999999999999999999852      234432221    2267889999999984    111134666666431   2


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC----CcEEEEe
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE----ARVKTLA  222 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~----~~v~l~D  222 (284)
                      ...+.||||+.+|.+|.++......+.++...+..++.|++.+|.+||+. |+|||||||+|+++....    ..+.++|
T Consensus        92 ~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~~~~~~~llD  170 (322)
T KOG1164|consen   92 TEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRSEVRTLYLLD  170 (322)
T ss_pred             CCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence            67789999999999999988766656799999999999999999999999 999999999999997653    5799999


Q ss_pred             ccchh--Hhh-hCC-------CCCCcccCCCCccchh
Q psy16752        223 LNATE--LAA-TGH-------KLPVSFCSTAPVQEYS  249 (284)
Q Consensus       223 fg~a~--~~~-~~~-------~~~~~~~gt~~~~aPE  249 (284)
                      ||+++  ... ...       .....+.||..|+++.
T Consensus       171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~  207 (322)
T KOG1164|consen  171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASIN  207 (322)
T ss_pred             cCCCccccccCCCCcccccCCCCccCCCCccccccHH
Confidence            99998  321 111       1122455777776655

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.86  E-value=4.3e-21  Score=171.20  Aligned_cols=161  Identities=24%  Similarity=0.373  Sum_probs=124.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .+|.+...||+|+||.||+|.+.     .+++....      ....+.+|+.+++.+.|        ++++++++.+...
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~niv~~~~~~~~~   86 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQH--------ENVIGLLDVFTSA   86 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCC--------CCccchhheeccc
Confidence            57999999999999999999753     24443221      12346789999999988        6688888876522


Q ss_pred             c--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        145 G--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       145 ~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                      .  .....+|+||||+..++.....    ..+++..+..++.|++.||.|||.. +|+||||||+||+++. ++.++++|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~-~~~~kL~d  160 (342)
T cd07879          87 VSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNE-DCELKILD  160 (342)
T ss_pred             ccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECC-CCCEEEee
Confidence            1  1234579999999876665441    2489999999999999999999999 9999999999999965 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++.....   ......+++.|+|||++.+
T Consensus       161 fg~~~~~~~---~~~~~~~~~~y~aPE~~~~  188 (342)
T cd07879         161 FGLARHADA---EMTGYVVTRWYRAPEVILN  188 (342)
T ss_pred             CCCCcCCCC---CCCCceeeecccChhhhcC
Confidence            999865422   1224567889999998755

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0664|consensus

Probab=99.85  E-value=1.8e-23  Score=173.07  Aligned_cols=164  Identities=26%  Similarity=0.410  Sum_probs=124.2

Q ss_pred             EEEEEecccCceeEEEeccee-----EEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc-
Q psy16752         79 RVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV-  146 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~-  146 (284)
                      +-.+.||-|+||+||.+++..     ..+....      ..+.+.+|+.+|..++|        .|++..++...-... 
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkH--------dNVLSaLDILQPph~d  127 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH--------DNVLSLLDILQPANPS  127 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhcc--------ccHHHHHHhcCCCCch
Confidence            334689999999999988732     2221111      24567889999999998        556666655431110 


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      --..+|+++|++..+|...+..-.  .++...++-++.||+.||.|||+. +|+||||||.|+|++++ ..+||||||++
T Consensus       128 fFqEiYV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSN-CvLKICDFGLA  203 (449)
T KOG0664|consen  128 FFQELYVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSN-CILKICDFGLA  203 (449)
T ss_pred             HHHHHHHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccC-ceEEecccccc
Confidence            112467889999888887776543  589999999999999999999999 99999999999999666 89999999999


Q ss_pred             hHhhhCCCCCCc-ccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVS-FCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~-~~gt~~~~aPE~l~~~  254 (284)
                      +..........+ .+-|-.|.|||++-|.
T Consensus       204 Rvee~d~~~hMTqEVVTQYYRAPEiLMGa  232 (449)
T KOG0664|consen  204 RTWDQRDRLNMTHEVVTQYYRAPELLMGA  232 (449)
T ss_pred             cccchhhhhhhHHHHHHHHhccHHHhhcc
Confidence            977766555443 3578899999998653

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.85  E-value=2.7e-21  Score=166.12  Aligned_cols=158  Identities=19%  Similarity=0.187  Sum_probs=119.8

Q ss_pred             EecccCceeEEEeccee-----------EEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         83 KLGWGHFSTVWFTGSKT-----------QVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~~-----------~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .||+|+||.||+|..+.           +++...     .....+.+|+.+++.+.|        ++|+++++.+.    
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----   69 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH--------PNIVKLLGVCL----   69 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC--------CCeeeEeeeec----
Confidence            68999999999987631           222211     123457789999999988        66998888765    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC----C
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSK-----YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE----A  216 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~----~  216 (284)
                      .....++||||+ +++|.+.+....     ...+++..+..++.||+.||.|||+. +++|+||+|+||+++.+.    .
T Consensus        70 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~~  148 (269)
T cd05044          70 LNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEKGYDADR  148 (269)
T ss_pred             CCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecCCCCCCc
Confidence            667799999999 678888876532     12378899999999999999999999 999999999999996653    2


Q ss_pred             cEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        217 RVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      .++++|||++........  ......++..|+|||.+.+
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLD  187 (269)
T ss_pred             ceEECCcccccccccccccccCcccCCCccccCHHHHcc
Confidence            899999999875533221  1223356788999997753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.85  E-value=5e-21  Score=165.61  Aligned_cols=165  Identities=17%  Similarity=0.195  Sum_probs=123.9

Q ss_pred             cceEEEEEecccCceeEEEeccee---------EEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT---------QVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~---------~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ++|++.+.||+|+||.||+|.+..         .++.....     ...+.+|+.+++.+.|        +|++++++..
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h--------~ni~~~~~~~   77 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH--------QNILPILHVC   77 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEE
Confidence            479999999999999999997532         22222211     2346789999999988        6688888754


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKY------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      .   ......+++++|+ +++|..++.....      ..+++..+..++.||+.||.|||+. +++||||||+||+++. 
T Consensus        78 ~---~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~nil~~~-  152 (280)
T cd05043          78 I---EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAARNCVIDE-  152 (280)
T ss_pred             e---cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHhhEEEcC-
Confidence            3   1356788999998 5777777765321      3488999999999999999999999 9999999999999954 


Q ss_pred             CCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        215 EARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      .+.++++|||+++........  .....++..|+|||++.+
T Consensus       153 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~  193 (280)
T cd05043         153 ELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN  193 (280)
T ss_pred             CCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc
Confidence            489999999998754332111  112345677999998754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG1095|consensus

Probab=99.85  E-value=3.2e-21  Score=186.41  Aligned_cols=167  Identities=18%  Similarity=0.218  Sum_probs=132.8

Q ss_pred             cceEEEEEecccCceeEEEecc----------eeEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ..-.+...||+|+||.||.|..          ++++|....     ...++++|..+|+.++|        +||+.+++.
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~H--------pNiv~liGv  763 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDH--------PNIVSLIGV  763 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC--------cceeeEEEe
Confidence            4578889999999999999875          134443322     34678999999999999        779999996


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK-----YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      ..    .....+|++||| +|+|+.++...+     ...++..++..++.+|+.|+.||+++ .+|||||..+|+||+..
T Consensus       764 ~l----~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRNCLL~~~  838 (1025)
T KOG1095|consen  764 CL----DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARNCLLDER  838 (1025)
T ss_pred             ec----CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhheeeccc
Confidence            55    577789999999 889999888762     23488999999999999999999999 99999999999999665


Q ss_pred             CCcEEEEeccchhHhhhCCCCCCcccCCC--Cccchhhhh-hccc
Q psy16752        215 EARVKTLALNATELAATGHKLPVSFCSTA--PVQEYSELS-RRMS  256 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~--~~~aPE~l~-~~~~  256 (284)
                       ..+||+|||+|+......-....-.++.  .|||||.+. +.++
T Consensus       839 -r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFt  882 (1025)
T KOG1095|consen  839 -RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFT  882 (1025)
T ss_pred             -CcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccc
Confidence             8999999999995544433333333444  599999997 4443

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.85  E-value=1.2e-20  Score=174.63  Aligned_cols=174  Identities=21%  Similarity=0.272  Sum_probs=117.1

Q ss_pred             ccceEEEEEecccCceeEEEecc---------------------eeEEEecCCC------------------ChhhHHHH
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS---------------------KTQVLVSPQF------------------PETALDEI  115 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~---------------------~~~~~~~~~~------------------~~~~~~E~  115 (284)
                      .++|.+.++||+|+||+||+|..                     .+++|.....                  .+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            35799999999999999999853                     1233332111                  12233466


Q ss_pred             HHHHhhhcCCCCCcccchhccccccceEec----cCCeEEEEEeccC-CccHHHHHHhhC--------------------
Q psy16752        116 KLLKCVRDGDVNDPYRERVVQLLDDFKICG----VNGTHVCMVFEVL-GHNLLKLIVKSK--------------------  170 (284)
Q Consensus       116 ~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~----~~~~~~~iv~e~~-~~~l~~~~~~~~--------------------  170 (284)
                      .++.++.+.++.+   .+++.+++++....    ......|+||||+ +++|.+.+....                    
T Consensus       224 ~~l~~l~~~~l~~---~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        224 YMCAKIKRNPIAA---ASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHhhcccchh---hhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            6666676643222   23445555443211    1245689999999 667777664321                    


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCC-CcccCCCCccc
Q psy16752        171 --YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLP-VSFCSTAPVQE  247 (284)
Q Consensus       171 --~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~-~~~~gt~~~~a  247 (284)
                        ...+++..++.++.|++.+|.|||.. +|+||||||+|||++.+ +.++|+|||++.......... ....+|+.|+|
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a  378 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVD-GQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP  378 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCC-CcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence              01245678899999999999999999 99999999999999654 789999999986543322111 12235899999


Q ss_pred             hhhhhh
Q psy16752        248 YSELSR  253 (284)
Q Consensus       248 PE~l~~  253 (284)
                      ||++..
T Consensus       379 PE~l~~  384 (507)
T PLN03224        379 PEELVM  384 (507)
T ss_pred             hhhhcC
Confidence            999864

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.85  E-value=8.4e-21  Score=165.70  Aligned_cols=164  Identities=20%  Similarity=0.257  Sum_probs=124.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++.+.||+|+||.||+|.+.     .+++....     ....+..|+.++.....       |++++++++.+.   
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~-------~~~i~~~~~~~~---   84 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHD-------CPYIVKCYGYFI---   84 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccC-------CCchHhhheeee---
Confidence            46999999999999999999874     23333321     11234556665555431       377999999876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+++.+...+.... ..+++..+..++.||+.||.|||+ . ||+||||+|+||+++. ++.++|+|||
T Consensus        85 -~~~~~~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~-~i~H~dl~p~nill~~-~~~~kL~dfg  160 (296)
T cd06618          85 -TDSDVFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKH-GVIHRDVKPSNILLDA-SGNVKLCDFG  160 (296)
T ss_pred             -cCCeEEEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhC-CEecCCCcHHHEEEcC-CCCEEECccc
Confidence             677899999999887777666543 368999999999999999999997 6 9999999999999954 5899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+........ .....++..|+|||.+.+.
T Consensus       161 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~  189 (296)
T cd06618         161 ISGRLVDSKA-KTRSAGCAAYMAPERIDPP  189 (296)
T ss_pred             cchhccCCCc-ccCCCCCccccCHhhcCCC
Confidence            9876543322 2234578899999998654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.3e-20  Score=159.95  Aligned_cols=155  Identities=26%  Similarity=0.365  Sum_probs=124.7

Q ss_pred             ecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      ||.|+||.||++.+.     .+++....       ....+..|+.+++.+.|        ++++++++.+.    .....
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~~~~   68 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH--------PFIVKLHYAFQ----TEEKL   68 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC--------CcHHHHHHHee----cCCee
Confidence            699999999999763     23333221       12357788999999987        66998888776    78899


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |+||||+ +++|.+.+....  .+++..+..++.|++.||.|||+. +++|+||+|+||+++.+ +.++++|||.+....
T Consensus        69 ~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~-~~~~l~d~~~~~~~~  144 (250)
T cd05123          69 YLVLEYAPGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDAD-GHIKLTDFGLAKELS  144 (250)
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCC-CcEEEeecCcceecc
Confidence            9999999 788888886653  489999999999999999999999 99999999999999554 789999999987665


Q ss_pred             hCCCCCCcccCCCCccchhhhhhc
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..........++..|++||.+.+.
T Consensus       145 ~~~~~~~~~~~~~~~~~Pe~~~~~  168 (250)
T cd05123         145 SEGSRTNTFCGTPEYLAPEVLLGK  168 (250)
T ss_pred             cCCCcccCCcCCccccChHHhCCC
Confidence            543334456788999999987543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.85  E-value=8.2e-21  Score=161.44  Aligned_cols=157  Identities=20%  Similarity=0.268  Sum_probs=119.0

Q ss_pred             EEecccCceeEEEecce----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         82 RKLGWGHFSTVWFTGSK----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      ++||.|+||.||+|.+.    .+++....     ....+..|+.+++.+.|        ++++.+++.+.    .....+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~----~~~~~~   68 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH--------PNIVKLIGVCV----QKQPIY   68 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC--------CCeEEEEEEEe----cCCCeE
Confidence            36899999999999763    34443222     12457789999999988        66888887665    677899


Q ss_pred             EEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhh
Q psy16752        153 MVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAAT  231 (284)
Q Consensus       153 iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~  231 (284)
                      +||||+ +++|.+.+.... ..+++..+..++.+++.||.|||+. +++||||+|+||+++. ++.++++|||.+.....
T Consensus        69 ~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~-~~~~~l~d~g~~~~~~~  145 (251)
T cd05041          69 IVMELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGE-NNVLKISDFGMSREEEG  145 (251)
T ss_pred             EEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcC-CCcEEEeeccccccccC
Confidence            999999 667777765543 3588999999999999999999999 9999999999999954 48999999999875542


Q ss_pred             CCCCC--CcccCCCCccchhhhhh
Q psy16752        232 GHKLP--VSFCSTAPVQEYSELSR  253 (284)
Q Consensus       232 ~~~~~--~~~~gt~~~~aPE~l~~  253 (284)
                      .....  ....++..|+|||.+.+
T Consensus       146 ~~~~~~~~~~~~~~~y~~PE~~~~  169 (251)
T cd05041         146 GIYTVSDGLKQIPIKWTAPEALNY  169 (251)
T ss_pred             CcceeccccCcceeccCChHhhcc
Confidence            22111  12233566999997653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.85  E-value=1.1e-20  Score=160.39  Aligned_cols=162  Identities=24%  Similarity=0.317  Sum_probs=130.3

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +|++.+.||+|++|.||+|.++     ..+++....      .+.+.+|+.+++++.|        ++++++++.+.   
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~--------~~i~~~~~~~~---   69 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH--------PNIVRYYGSER---   69 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC--------CCEeeEEEEEe---
Confidence            4889999999999999999764     233332221      3457889999999987        66888887665   


Q ss_pred             cCC--eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        146 VNG--THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       146 ~~~--~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                       ..  ...++||||+ +++|.+.+....  .+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.++|+|
T Consensus        70 -~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~-~~~~~l~d  144 (260)
T cd06606          70 -DEEKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDS-DGVVKLAD  144 (260)
T ss_pred             -cCCCCeEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcC-CCCEEEcc
Confidence             44  7899999999 677777776543  589999999999999999999999 9999999999999965 58999999


Q ss_pred             ccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||.+........  ......++..|++||.+...
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~  178 (260)
T cd06606         145 FGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGE  178 (260)
T ss_pred             cccEEecccccccccccCCCCCccccCHhhhcCC
Confidence            998876665533  13356789999999988655

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.85  E-value=5e-21  Score=168.23  Aligned_cols=158  Identities=21%  Similarity=0.311  Sum_probs=125.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ..|...+.||.|+||.||+|.++     .+++....       ....+.+|+.+++.+.|        ++++++++.+. 
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~-   85 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH--------PNTIQYRGCYL-   85 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCC--------CCcccEEEEEE-
Confidence            35888899999999999999863     23333221       12346679999999988        66888888766 


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                         .....++||||+.+++.+.+.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++. ++.++++||
T Consensus        86 ---~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~-~~~~kl~df  159 (308)
T cd06634          86 ---REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSE-PGLVKLGDF  159 (308)
T ss_pred             ---cCCeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECC-CCcEEECCc
Confidence               667899999999888887776543 3589999999999999999999999 9999999999999955 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |++......    ....+++.|+|||.+.
T Consensus       160 g~~~~~~~~----~~~~~~~~y~aPE~~~  184 (308)
T cd06634         160 GSASIMAPA----NXFVGTPYWMAPEVIL  184 (308)
T ss_pred             ccceeecCc----ccccCCccccCHHHHh
Confidence            987654322    2456888999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.85  E-value=4.2e-21  Score=167.58  Aligned_cols=159  Identities=23%  Similarity=0.297  Sum_probs=122.1

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      |.....||+|+||.||++..+     .+++....    ....+.+|+.+++.+.|        ++++++++.+.    ..
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~----~~   89 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH--------ENVVEMYNSYL----VG   89 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC--------cchhheeeEEE----eC
Confidence            334468999999999998662     23333221    22346778999998887        66999988776    67


Q ss_pred             eEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...|+||||+. ++|.+.+ ...  .+++..+..++.|++.||.|||+. |++|+||+|+||+++.+ +.++++|||++.
T Consensus        90 ~~~~lv~e~~~~~~L~~~~-~~~--~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~-~~~~l~dfg~~~  164 (292)
T cd06657          90 DELWVVMEFLEGGALTDIV-THT--RMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHD-GRVKLSDFGFCA  164 (292)
T ss_pred             CEEEEEEecCCCCcHHHHH-hcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCC-CCEEEcccccce
Confidence            88999999995 4555544 332  489999999999999999999999 99999999999999654 789999999876


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      .............+++.|++||.+.+
T Consensus       165 ~~~~~~~~~~~~~~~~~y~~pE~~~~  190 (292)
T cd06657         165 QVSKEVPRRKSLVGTPYWMAPELISR  190 (292)
T ss_pred             ecccccccccccccCccccCHHHhcC
Confidence            55433222334578999999998854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=9.9e-21  Score=161.90  Aligned_cols=153  Identities=22%  Similarity=0.323  Sum_probs=114.3

Q ss_pred             EEecccCceeEEEecce-----eEEEecCCCC-------hhhHHHHHHHHh-hhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-----TQVLVSPQFP-------ETALDEIKLLKC-VRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~-------~~~~~E~~~l~~-l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.||.|+||.||+|.+.     .+++......       .....|..++.. ..|        ++++++++.+.    ..
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--------~~i~~~~~~~~----~~   69 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGES--------PYVAKLYYSFQ----SK   69 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCC--------CCeeeeeeeEE----cC
Confidence            57899999999999762     3444432211       112233333322 233        77999988876    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+. +++||||+|+||+++. .+.++++|||++.
T Consensus        70 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~-~~~~~l~dfg~~~  145 (260)
T cd05611          70 DYLYLVMEYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQ-TGHLKLTDFGLSR  145 (260)
T ss_pred             CeEEEEEeccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECC-CCcEEEeecccce
Confidence            8899999999 667777665443  589999999999999999999999 9999999999999955 4899999999876


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ....    .....+++.|++||.+.+.
T Consensus       146 ~~~~----~~~~~~~~~y~~pe~~~~~  168 (260)
T cd05611         146 NGLE----NKKFVGTPDYLAPETILGV  168 (260)
T ss_pred             eccc----cccCCCCcCccChhhhcCC
Confidence            5432    2345688899999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.85  E-value=1.4e-20  Score=161.97  Aligned_cols=167  Identities=19%  Similarity=0.224  Sum_probs=120.0

Q ss_pred             eEEEEEecccCceeEEEecce--------eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      |.+.+.||+|+||.||+|..+        .+++.....      .+.+.+|+.+++.+.|        ++++++++.+..
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~~   72 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH--------PNVIKLIGVSLR   72 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC--------CCcceEEEEEcc
Confidence            567789999999999999642        244433221      2346789999999988        668888876542


Q ss_pred             eccC--CeEEEEEeccC-CccHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC
Q psy16752        144 CGVN--GTHVCMVFEVL-GHNLLKLIVKSK----YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       144 ~~~~--~~~~~iv~e~~-~~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~  216 (284)
                      ....  ....+++++|+ ++++...+....    ...+++..+..++.|++.||.|||+. ||+||||||+||+++. ..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nili~~-~~  150 (273)
T cd05074          73 SRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCMLNE-NM  150 (273)
T ss_pred             CCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEEEcC-CC
Confidence            2111  12357888998 677766664322    12378899999999999999999999 9999999999999954 58


Q ss_pred             cEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++++|||++.........  .....+++.|++||.+...
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  190 (273)
T cd05074         151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADN  190 (273)
T ss_pred             CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcC
Confidence            8999999998765433211  1123345678999976543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0668|consensus

Probab=99.85  E-value=3.6e-22  Score=161.59  Aligned_cols=161  Identities=24%  Similarity=0.402  Sum_probs=127.9

Q ss_pred             cceEEEEEecccCceeEEEecc-----eeEEEe-cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS-----KTQVLV-SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      ++|++.+++|+|-+++||.|..     +..+++ .+...+.+.+|+.+|..++.       ++||+.+++.+.  ++...
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g-------g~NIi~L~DiV~--Dp~Sk  108 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG-------GPNIIKLLDIVK--DPESK  108 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC-------CCCeeehhhhhc--Ccccc
Confidence            5799999999999999998874     445554 34456788999999999984       488999999764  44555


Q ss_pred             EEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       150 ~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      ...+++||.....+..+..    .++..+++.++.+++.||+|||++ ||.|||+||.|++|+.....++++|+|+|.+.
T Consensus       109 tpaLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~-GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  109 TPSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSM-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY  183 (338)
T ss_pred             CchhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhc-CcccccCCcceeeechhhceeeeeecchHhhc
Confidence            6779999997766665543    378899999999999999999999 99999999999999888889999999999988


Q ss_pred             hhCCCCCCcccCCCCccchhhh
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSEL  251 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l  251 (284)
                      .++..... .+.+-.+-.||.|
T Consensus       184 Hp~~eYnV-RVASRyfKGPELL  204 (338)
T KOG0668|consen  184 HPGKEYNV-RVASRYFKGPELL  204 (338)
T ss_pred             CCCceeee-eeehhhcCCchhe
Confidence            87654322 1233334455544

>KOG1345|consensus

Probab=99.84  E-value=6e-22  Score=163.83  Aligned_cols=166  Identities=17%  Similarity=0.274  Sum_probs=124.3

Q ss_pred             ccceEEEEEecccCceeEEEeccee-----EEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT-----QVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .+.|.|.+.||+|-||.+.+|.++.     +++..+.   ...++.+|...--.|.+       |.||+.-|+..   ..
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~-------H~hIi~tY~va---Fq   92 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSP-------HQHIIDTYEVA---FQ   92 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeecc-------chhhhHHHHHH---hh
Confidence            3469999999999999999999854     3333332   23556666655444444       57787766542   23


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe-eCCCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC-VDEARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~-~~~~~v~l~Dfg  224 (284)
                      ..+++++++||+ -|+|..-+...   ++.+...+.++.|++.||+|||++ .+||||||.+||||- +|..+|++||||
T Consensus        93 t~d~YvF~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df~rvKlcDFG  168 (378)
T KOG1345|consen   93 TSDAYVFVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADFYRVKLCDFG  168 (378)
T ss_pred             cCceEEEeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCccEEEeeecc
Confidence            677899999999 67777666543   489999999999999999999999 999999999999994 456699999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhccch
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      .+...+..   ..-..++-+|.+||+.....++
T Consensus       169 ~t~k~g~t---V~~~~~~~~y~~pe~~~~~~ne  198 (378)
T KOG1345|consen  169 LTRKVGTT---VKYLEYVNNYHAPELCDTVVNE  198 (378)
T ss_pred             cccccCce---ehhhhhhcccCCcHHHhhcccc
Confidence            97644422   2233567788888888766544

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.84  E-value=9.2e-21  Score=162.89  Aligned_cols=162  Identities=22%  Similarity=0.327  Sum_probs=122.8

Q ss_pred             eEEEEEecccCceeEEEeccee------EEEecCC--------------CChhhHHHHHHHHh-hhcCCCCCcccchhcc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT------QVLVSPQ--------------FPETALDEIKLLKC-VRDGDVNDPYRERVVQ  136 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~------~~~~~~~--------------~~~~~~~E~~~l~~-l~~~~~~~~~~~~i~~  136 (284)
                      |++.+.||+|+||.||++.++.      +++....              ....+..|+.++.. +.|        +++++
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--------~~i~~   73 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH--------PNIVR   73 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCC--------CCeee
Confidence            8889999999999999998632      2222110              11234556666654 455        67898


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEe
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLC  212 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~  212 (284)
                      +++.+.    .....|++|||+ ++++.+.+...  ....+++..+..++.|++.||.|||+ . +++|+||+|+||+++
T Consensus        74 ~~~~~~----~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-~i~H~dl~~~nil~~  148 (269)
T cd08528          74 YYKTFL----ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK-RIVHRDLTPNNIMLG  148 (269)
T ss_pred             EEeeEc----cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC-ceeecCCCHHHEEEC
Confidence            888776    678999999999 56777766432  22358999999999999999999996 6 899999999999995


Q ss_pred             eCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        213 VDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       213 ~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      . .+.++++|||.+....... ......++..|++||.+.+.
T Consensus       149 ~-~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~  188 (269)
T cd08528         149 E-DDKVTITDFGLAKQKQPES-KLTSVVGTILYSCPEIVKNE  188 (269)
T ss_pred             C-CCcEEEecccceeeccccc-ccccccCcccCcChhhhcCC
Confidence            5 4899999999987654432 33355689999999988654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG1026|consensus

Probab=99.84  E-value=3.1e-21  Score=180.74  Aligned_cols=165  Identities=19%  Similarity=0.265  Sum_probs=130.0

Q ss_pred             eccceEEEEEecccCceeEEEeccee----------EEEe-----cCCCChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSKT----------QVLV-----SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~~----------~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      ...+.+..+.||+|+||+||+|....          ++|.     ..+..++|.+|++++..++|        +|||+++
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H--------~nIVrLl  555 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH--------PNIVRLL  555 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC--------CCeEEEE
Confidence            34567888999999999999997521          2222     12246789999999999999        7799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------C----CCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------R----GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK  205 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------~----~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiK  205 (284)
                      +...    .++-+|+|+||+ .|+|-+++..+..        .    .++..+.+.|+.||+.|+.||-++ .+|||||.
T Consensus       556 GVC~----~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHRDLA  630 (774)
T KOG1026|consen  556 GVCR----EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHRDLA  630 (774)
T ss_pred             EEEc----cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-cccccchh
Confidence            9877    888999999999 8899888876431        1    278899999999999999999999 99999999


Q ss_pred             CCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhh
Q psy16752        206 PENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       206 p~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~  252 (284)
                      ..|+|| .++..|||.|||+++-.-...-  ......--..||+||.+.
T Consensus       631 TRNCLV-ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIl  678 (774)
T KOG1026|consen  631 TRNCLV-GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESIL  678 (774)
T ss_pred             hhhcee-ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhh
Confidence            999999 4558999999999985443221  111223355799999874

>KOG1167|consensus

Probab=99.84  E-value=6.4e-21  Score=166.02  Aligned_cols=136  Identities=26%  Similarity=0.476  Sum_probs=116.7

Q ss_pred             cceEEEEEecccCceeEEEeccee--------EEEe--cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT--------QVLV--SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~--------~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ..|.++++||.|.|++||+|.+..        +++.  .......+..|+++|..+..       ..||+.+.+.+.   
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG-------~~ni~~~~~~~r---  105 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGG-------SDNIIKLNGCFR---  105 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhcc-------chhhhcchhhhc---
Confidence            459999999999999999997632        2222  23456789999999999987       377999999887   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ..+..++||||++..-+..+.+.    ++...++.+++.++.||.++|.. |||||||||.|+|.+...+.-.|+|||+
T Consensus       106 -nnd~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~rg~LvDFgL  179 (418)
T KOG1167|consen  106 -NNDQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQRGVLVDFGL  179 (418)
T ss_pred             -cCCeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccCCceEEechh
Confidence             88999999999977666665543    77899999999999999999999 9999999999999999999999999999


Q ss_pred             hh
Q psy16752        226 TE  227 (284)
Q Consensus       226 a~  227 (284)
                      |.
T Consensus       180 A~  181 (418)
T KOG1167|consen  180 AQ  181 (418)
T ss_pred             HH
Confidence            87

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.84  E-value=3.2e-20  Score=163.23  Aligned_cols=162  Identities=16%  Similarity=0.170  Sum_probs=119.8

Q ss_pred             EEEEEecccCceeEEEecc---eeEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         79 RVTRKLGWGHFSTVWFTGS---KTQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~---~~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .+.+.+|.|+++.|+.+..   ..+++....      ....+..|+.+++.++|        +||+++++.+.    ...
T Consensus         5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h--------~~i~~~~~~~~----~~~   72 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQH--------PNILPYVTSFI----VDS   72 (314)
T ss_pred             hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCC--------cchhhhhheee----cCC
Confidence            3444555566666665544   224443221      22467889999999988        66999988776    678


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ..+++|||+ ++++.+.+.......+++..+..++.|++.||.|||++ +|+||||||+||+++. ++.+++.||+.+..
T Consensus        73 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~-~~~~kl~d~~~~~~  150 (314)
T cd08216          73 ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSG-DGKVVLSGLRYSVS  150 (314)
T ss_pred             eEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEec-CCceEEecCcccee
Confidence            899999999 56666666654444589999999999999999999999 9999999999999964 48999999998764


Q ss_pred             hhhCCC-------CCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHK-------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~-------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ......       ......++.+|+|||++.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (314)
T cd08216         151 MIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQN  183 (314)
T ss_pred             eccccccccccccccccccccccccCHHHhcCC
Confidence            432211       12344578889999998653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1094|consensus

Probab=99.83  E-value=1.5e-20  Score=169.43  Aligned_cols=170  Identities=20%  Similarity=0.293  Sum_probs=133.6

Q ss_pred             ceeccceEEEEEecccCceeEEEeccee----EEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSKT----QVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~~----~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +....+..+.++||+|-||.|.+|....    ++|...     ....++.+|+.+|.+++|        |||+.+++.+.
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh--------PNIveLvGVC~  605 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKH--------PNIVELLGVCV  605 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCC--------CCeeEEEeeee
Confidence            4445677889999999999999997633    444322     224678999999999998        77999999765


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          .++.+|++|||+ .|+|-+++..+............++.||+.|+.||.+. .+|||||.+.|+|++ .+.++||+
T Consensus       606 ----~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~-~e~~iKia  679 (807)
T KOG1094|consen  606 ----QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVD-GEFTIKIA  679 (807)
T ss_pred             ----cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeec-CcccEEec
Confidence                788899999999 78888888887533345566778999999999999998 999999999999994 45899999


Q ss_pred             eccchhHhhhCCC--CCCcccCCCCccchhhh-hhcc
Q psy16752        222 ALNATELAATGHK--LPVSFCSTAPVQEYSEL-SRRM  255 (284)
Q Consensus       222 Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l-~~~~  255 (284)
                      |||.++-.-.+..  ..+..+-...|||||.+ .+++
T Consensus       680 dfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkF  716 (807)
T KOG1094|consen  680 DFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKF  716 (807)
T ss_pred             CcccccccccCCceeeecceeeeeeehhHHHHHhccc
Confidence            9999885544432  23344556789999987 4443

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.82  E-value=8.6e-20  Score=154.40  Aligned_cols=147  Identities=16%  Similarity=0.077  Sum_probs=110.7

Q ss_pred             cCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccC-Cc
Q psy16752         87 GHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GH  160 (284)
Q Consensus        87 G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~  160 (284)
                      |.+|.||+|.++     .++|..... .....|...+....|        ++++++++.+.    .....|+||||+ ++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~-~~~~~~~~~~~~~~~--------~~i~~~~~~~~----~~~~~~lv~e~~~~~   70 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKS-SEYSRERLTIIPHCV--------PNMVCLHKYIV----SEDSVFLVLQHAEGG   70 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecch-hhhhhHHHHHHhcCC--------Cceeehhhhee----cCCeEEEEEecCCCC
Confidence            899999999873     244443322 123344443333333        77999988776    678899999999 67


Q ss_pred             cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCccc
Q psy16752        161 NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFC  240 (284)
Q Consensus       161 ~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~  240 (284)
                      +|.+.+.+..  .+++..+..++.|++.||.|||+. ||+||||||+||+++.+ +.++++|||.+......   .....
T Consensus        71 ~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~-~~~~l~df~~~~~~~~~---~~~~~  143 (237)
T cd05576          71 KLWSHISKFL--NIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDR-GHIQLTYFSRWSEVEDS---CDGEA  143 (237)
T ss_pred             CHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCC-CCEEEecccchhccccc---cccCC
Confidence            8888876653  489999999999999999999999 99999999999999554 78999999987554332   22345


Q ss_pred             CCCCccchhhhhh
Q psy16752        241 STAPVQEYSELSR  253 (284)
Q Consensus       241 gt~~~~aPE~l~~  253 (284)
                      ++..|+|||.+.+
T Consensus       144 ~~~~y~aPE~~~~  156 (237)
T cd05576         144 VENMYCAPEVGGI  156 (237)
T ss_pred             cCccccCCcccCC
Confidence            6778999998754

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.82  E-value=3.2e-20  Score=151.87  Aligned_cols=130  Identities=16%  Similarity=0.209  Sum_probs=92.6

Q ss_pred             EEEecccCceeEEEecce----eEEEecCCCC-------------hh-----------------hHHHHHHHHhhhcCCC
Q psy16752         81 TRKLGWGHFSTVWFTGSK----TQVLVSPQFP-------------ET-----------------ALDEIKLLKCVRDGDV  126 (284)
Q Consensus        81 ~~~LG~G~fg~Vy~a~~~----~~~~~~~~~~-------------~~-----------------~~~E~~~l~~l~~~~~  126 (284)
                      .+.||+|+||.||+|.+.    +++|+.....             ..                 ...|+.++..+.++.+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            368999999999999862    3555432210             11                 1248899999987543


Q ss_pred             CCcccchhccccccceEeccCCeEEEEEeccCCccHH-HHHHhhCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCcEecCC
Q psy16752        127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLL-KLIVKSKYRGIPLENVRSIIRQILQGLNYL-HTKCRIIHTDI  204 (284)
Q Consensus       127 ~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~-~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L-H~~~givHrDi  204 (284)
                      ..|.   +.   .       . ...+|||||++|+.+ ......  ..++...+..++.|++.+|.++ |.. ||+||||
T Consensus        82 ~~p~---~~---~-------~-~~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~-giiHrDl  144 (190)
T cd05147          82 PCPE---PI---L-------L-KSHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDC-RLVHADL  144 (190)
T ss_pred             CCCc---EE---E-------e-cCCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC-CcccCCC
Confidence            2211   11   1       1 113799999966543 332322  3589999999999999999999 688 9999999


Q ss_pred             CCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        205 KPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       205 Kp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      ||+|||++ + +.++++|||+|...
T Consensus       145 kP~NIli~-~-~~v~LiDFG~a~~~  167 (190)
T cd05147         145 SEYNLLYH-D-GKLYIIDVSQSVEH  167 (190)
T ss_pred             CHHHEEEE-C-CcEEEEEccccccC
Confidence            99999996 3 68999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4278|consensus

Probab=99.82  E-value=2e-20  Score=169.75  Aligned_cols=167  Identities=20%  Similarity=0.226  Sum_probs=134.4

Q ss_pred             ceEEEEEecccCceeEEEeccee-----EEEe---cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT-----QVLV---SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      +.....+||.|.||.||.+.++.     +++.   .....+.|+.|..+|+.+.|        +|+++|++.+.    ..
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikH--------pNLVqLLGVCT----~E  335 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH--------PNLVQLLGVCT----HE  335 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcC--------ccHHHHhhhhc----cC
Confidence            35667899999999999998854     2222   22235778999999999999        77999999776    77


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .-+|||+||| .|+|++++.+.....++.-.++.++.||..|++||..+ .+|||||...|+|+..+ ..|+++|||+++
T Consensus       336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVgEn-hiVKvADFGLsR  413 (1157)
T KOG4278|consen  336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGEN-HIVKVADFGLSR  413 (1157)
T ss_pred             CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhcccccc-ceEEeeccchhh
Confidence            8899999999 89999999988766688888899999999999999999 99999999999999544 899999999999


Q ss_pred             HhhhCCCCC-CcccCCCCccchhhhhhccch
Q psy16752        228 LAATGHKLP-VSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       228 ~~~~~~~~~-~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      +.....-.. ..--...-|-|||-|+..-..
T Consensus       414 lMtgDTYTAHAGAKFPIKWTAPEsLAyNtFS  444 (1157)
T KOG4278|consen  414 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFS  444 (1157)
T ss_pred             hhcCCceecccCccCcccccCcccccccccc
Confidence            776543222 122345568888888765443

>KOG1027|consensus

Probab=99.82  E-value=4.9e-20  Score=171.93  Aligned_cols=166  Identities=25%  Similarity=0.288  Sum_probs=127.8

Q ss_pred             EEEEEecccCcee-EEEeccee-EEEec---CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEE
Q psy16752         79 RVTRKLGWGHFST-VWFTGSKT-QVLVS---PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCM  153 (284)
Q Consensus        79 ~i~~~LG~G~fg~-Vy~a~~~~-~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~i  153 (284)
                      .--+.+|.|+.|+ ||++.... .++++   ......+.+|+..|+.-+.       |+||+++|+.-.    +..++||
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~-------H~NviRyyc~E~----d~qF~YI  580 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDE-------HPNVIRYYCSEQ----DRQFLYI  580 (903)
T ss_pred             ccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccC-------CCceEEEEeecc----CCceEEE
Confidence            3346788998874 68887633 33332   3344567899999987665       588999998544    8899999


Q ss_pred             EeccCCccHHHHHHhhC-C-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC----CCcEEEEeccchh
Q psy16752        154 VFEVLGHNLLKLIVKSK-Y-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD----EARVKTLALNATE  227 (284)
Q Consensus       154 v~e~~~~~l~~~~~~~~-~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~----~~~v~l~Dfg~a~  227 (284)
                      +.|+|.++|.+++.... . ..........++.|++.||.+||+. +||||||||.||||...    ...++|.|||+|+
T Consensus       581 alELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK  659 (903)
T KOG1027|consen  581 ALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK  659 (903)
T ss_pred             EehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence            99999999999998741 1 1011144577899999999999998 99999999999999862    3589999999999


Q ss_pred             HhhhCCCC---CCcccCCCCccchhhhhhccc
Q psy16752        228 LAATGHKL---PVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       228 ~~~~~~~~---~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      ....+...   ..+..||.+|+|||++.....
T Consensus       660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~  691 (903)
T KOG1027|consen  660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRK  691 (903)
T ss_pred             ccCCCcchhhcccCCCCcccccCHHHHhcccc
Confidence            88766543   346789999999999987654

>KOG0196|consensus

Probab=99.81  E-value=2.4e-20  Score=172.90  Aligned_cols=164  Identities=13%  Similarity=0.232  Sum_probs=133.2

Q ss_pred             cceEEEEEecccCceeEEEeccee--------EEEe-----cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT--------QVLV-----SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~--------~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ....|.++||.|.||+|++++.+.        ++|.     ......+|+.|..||-++.|        |||+.|.+.+.
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH--------PNIIrLEGVVT  700 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH--------PNIIRLEGVVT  700 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC--------CcEEEEEEEEe
Confidence            346889999999999999998742        3332     23346779999999999999        67999999876


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ...-+.||+||| .|+|..++..+. +.|+..++..+++.|+.|+.||-+. ++|||||...||||+.+ -.||+.
T Consensus       701 ----ks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNsn-LvCKVs  773 (996)
T KOG0196|consen  701 ----KSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNSN-LVCKVS  773 (996)
T ss_pred             ----cCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhc-Cchhhhhhhhheeeccc-eEEEec
Confidence                777889999999 677777776665 4599999999999999999999999 99999999999999666 899999


Q ss_pred             eccchhHhhhCCCCCC-cccCC--CCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPV-SFCST--APVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~-~~~gt--~~~~aPE~l~~~  254 (284)
                      |||+++....+..... +..|-  ..|-|||.++.+
T Consensus       774 DFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~R  809 (996)
T KOG0196|consen  774 DFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYR  809 (996)
T ss_pred             cccceeecccCCCccccccCCccceeecChhHhhhc
Confidence            9999998766542222 33333  458899999754

>KOG0199|consensus

Probab=99.80  E-value=1.9e-20  Score=171.74  Aligned_cols=164  Identities=20%  Similarity=0.210  Sum_probs=132.1

Q ss_pred             cceEEEEEecccCceeEEEeccee--------EEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT--------QVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~--------~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++.++.++||+|.||+||++.++.        ++|+...     ...+|++|+.+|.+|+|        +++++||+.+.
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H--------~hliRLyGvVl  181 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQH--------PHLIRLYGVVL  181 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccC--------cceeEEeeeec
Confidence            456777899999999999998832        4444322     35779999999999999        77999999875


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                           +..+-+|||++ .|+|++.+.......|-...++.|+.||+.|+.||..+ ++|||||...|+||.. ...|||+
T Consensus       182 -----~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllas-prtVKI~  254 (1039)
T KOG0199|consen  182 -----DQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLAS-PRTVKIC  254 (1039)
T ss_pred             -----cchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecc-cceeeee
Confidence                 36788999999 88999999885555688999999999999999999999 9999999999999965 5899999


Q ss_pred             eccchhHhhhCCCCC---CcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLP---VSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~---~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+.+-+..+...-   ....--..|+|||.|...
T Consensus       255 DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~  290 (1039)
T KOG0199|consen  255 DFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHR  290 (1039)
T ss_pred             cccceeccCCCCcceEecCCCcCcccccCHhHhccc
Confidence            999988766554321   111123458999998543

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.80  E-value=1.6e-19  Score=181.38  Aligned_cols=154  Identities=15%  Similarity=0.207  Sum_probs=116.7

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHV  151 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~  151 (284)
                      .|.....||+|+||.||+|.++     +++|...........|+.++++++|        +||+++++++.    .....
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~H--------pnIv~~~~~~~----~~~~~  758 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQH--------PNIVKLIGLCR----SEKGA  758 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCC--------CCcceEEEEEE----cCCCC
Confidence            4677789999999999999752     3555444444445667889999887        77999999876    66788


Q ss_pred             EEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        152 CMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLH---TKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       152 ~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      |+||||+ +|+|.+.+.     .+++..+..++.||+.||.|||   +. +|+||||||+||+++.+ ...++. |+.+.
T Consensus       759 ~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~-~~~~~~-~~~~~  830 (968)
T PLN00113        759 YLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGK-DEPHLR-LSLPG  830 (968)
T ss_pred             EEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCC-CceEEE-ecccc
Confidence            9999999 677777763     2789999999999999999999   66 99999999999999544 444443 55443


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .....    ....+|+.|+|||++.+.
T Consensus       831 ~~~~~----~~~~~t~~y~aPE~~~~~  853 (968)
T PLN00113        831 LLCTD----TKCFISSAYVAPETRETK  853 (968)
T ss_pred             ccccC----CCccccccccCcccccCC
Confidence            32211    233678999999987643

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.79  E-value=5.7e-19  Score=144.65  Aligned_cols=131  Identities=15%  Similarity=0.173  Sum_probs=92.9

Q ss_pred             EEEecccCceeEEEecce----eEEEecCCCC------------------------------hhhHHHHHHHHhhhcCCC
Q psy16752         81 TRKLGWGHFSTVWFTGSK----TQVLVSPQFP------------------------------ETALDEIKLLKCVRDGDV  126 (284)
Q Consensus        81 ~~~LG~G~fg~Vy~a~~~----~~~~~~~~~~------------------------------~~~~~E~~~l~~l~~~~~  126 (284)
                      ...||+|+||.||+|.+.    .++|+.....                              ....+|...+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            468999999999999863    3444422211                              112467888888887442


Q ss_pred             CCcccchhccccccceEeccCCeEEEEEeccCCcc-HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCC
Q psy16752        127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHN-LLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDI  204 (284)
Q Consensus       127 ~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~-l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDi  204 (284)
                      ..      +..+.  .    .  ..|+||||++|. +.......  ..++...+..++.|++.+|.++|+ . ||+||||
T Consensus        82 ~~------p~~~~--~----~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~-givHrDl  144 (190)
T cd05145          82 PV------PEPIL--L----K--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEA-GLVHGDL  144 (190)
T ss_pred             CC------ceEEE--e----c--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCC
Confidence            11      11111  0    1  238999999654 43332222  247889999999999999999999 8 9999999


Q ss_pred             CCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        205 KPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       205 Kp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      ||+|||++  ++.++++|||++....
T Consensus       145 kP~NIll~--~~~~~liDFG~a~~~~  168 (190)
T cd05145         145 SEYNILYH--DGKPYIIDVSQAVELD  168 (190)
T ss_pred             ChhhEEEE--CCCEEEEEcccceecC
Confidence            99999996  5899999999986443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.79  E-value=1.4e-18  Score=143.88  Aligned_cols=136  Identities=15%  Similarity=0.153  Sum_probs=98.3

Q ss_pred             EEEecccCceeEEEecc--eeEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE-EEE
Q psy16752         81 TRKLGWGHFSTVWFTGS--KTQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH-VCM  153 (284)
Q Consensus        81 ~~~LG~G~fg~Vy~a~~--~~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~-~~i  153 (284)
                      ...||+|+||.||.-..  ...+|+...    ....+.+|+.+++.+.|....   |+||++++++++... +... +.+
T Consensus         7 ~~~LG~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~---h~nIvr~yg~~et~~-g~g~v~~~   82 (210)
T PRK10345          7 QSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLID---WSGIPRYYGTVETDC-GTGYVYDV   82 (210)
T ss_pred             cceecCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCC---CcccceeeEEEEeCC-CCeEEEEE
Confidence            46899999999996222  123444322    345689999999999763322   477999999887321 2234 448


Q ss_pred             EeccCC---ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHH-HHHhhCCCcEecCCCCCCeeEeeC---CCcEEEEeccch
Q psy16752        154 VFEVLG---HNLLKLIVKSKYRGIPLENVRSIIRQILQGL-NYLHTKCRIIHTDIKPENVLLCVD---EARVKTLALNAT  226 (284)
Q Consensus       154 v~e~~~---~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL-~~LH~~~givHrDiKp~NIll~~~---~~~v~l~Dfg~a  226 (284)
                      ||||.+   ++|.+++.+.   .+++.  ..++.|++.++ .|||++ +||||||||+|||++..   ...++|+||+.+
T Consensus        83 I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            899954   6888888553   26655  35678888887 899999 99999999999999743   348999996554

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.78  E-value=4.6e-18  Score=139.09  Aligned_cols=157  Identities=30%  Similarity=0.475  Sum_probs=125.3

Q ss_pred             ecccCceeEEEecce-----eEEEecCCCC-----hhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEE
Q psy16752         84 LGWGHFSTVWFTGSK-----TQVLVSPQFP-----ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCM  153 (284)
Q Consensus        84 LG~G~fg~Vy~a~~~-----~~~~~~~~~~-----~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~i  153 (284)
                      ||.|++|.||++...     ..++......     ..+.+|+.+++.+.+        ++++++++.+.    .....++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~--------~~i~~~~~~~~----~~~~~~~   68 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH--------PNIVKLYGVFE----DENHLYL   68 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC--------CCeeeEeeeee----cCCeEEE
Confidence            689999999999774     3445443332     568899999999988        56888888766    5578999


Q ss_pred             EeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhC
Q psy16752        154 VFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATG  232 (284)
Q Consensus       154 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~  232 (284)
                      +||+++ ++|.+++.... ..+++..+..++.+++.+|.+||.. |++|+||+|.||+++...+.++++||+.+......
T Consensus        69 ~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180          69 VMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence            999996 77777766542 2489999999999999999999999 99999999999999653589999999988766544


Q ss_pred             CCCCCcccCCCCccchhhhhhc
Q psy16752        233 HKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       233 ~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ........+...|++||.+...
T Consensus       147 ~~~~~~~~~~~~~~~pe~~~~~  168 (215)
T cd00180         147 KSLLKTIVGTPAYMAPEVLLGK  168 (215)
T ss_pred             cchhhcccCCCCccChhHhccc
Confidence            3223445688999999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.77  E-value=1.9e-18  Score=143.83  Aligned_cols=144  Identities=11%  Similarity=0.090  Sum_probs=101.7

Q ss_pred             ccceeccceEEEEEecccCceeEEEecc---eeEEEecCC----CCh---------hhHHHHHHHHhhhcCCCCCcccch
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGS---KTQVLVSPQ----FPE---------TALDEIKLLKCVRDGDVNDPYRER  133 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~---~~~~~~~~~----~~~---------~~~~E~~~l~~l~~~~~~~~~~~~  133 (284)
                      ...++.++|++++.||.|+||.||++..   +.++|+...    ...         .+.+|+..+.++.|+++..+...+
T Consensus        25 ~~~~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~  104 (232)
T PRK10359         25 FDDFLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY  104 (232)
T ss_pred             HHHHhhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence            3456678999999999999999999866   345554321    111         156888899999997655554433


Q ss_pred             hccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        134 VVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       134 i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      +......+.    .....++||||+.|..+..+.     .+++.    ...+++.+|..||.. |++|||++|+||++++
T Consensus       105 ~~~~~~~~~----~~~~~~lvmEyi~G~tL~~~~-----~~~~~----~~~~i~~~l~~lH~~-gi~H~Dikp~Nili~~  170 (232)
T PRK10359        105 LLAERKTLR----YAHTYIMLIEYIEGVELNDMP-----EISED----VKAKIKASIESLHQH-GMVSGDPHKGNFIVSK  170 (232)
T ss_pred             eeccccccc----ccCCeEEEEEEECCccHHHhh-----hccHH----HHHHHHHHHHHHHHc-CCccCCCChHHEEEeC
Confidence            333222221    245689999999664433331     13332    456999999999999 9999999999999966


Q ss_pred             CCCcEEEEeccchhHh
Q psy16752        214 DEARVKTLALNATELA  229 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~  229 (284)
                      + + ++++|||.+...
T Consensus       171 ~-g-i~liDfg~~~~~  184 (232)
T PRK10359        171 N-G-LRIIDLSGKRCT  184 (232)
T ss_pred             C-C-EEEEECCCcccc
Confidence            5 5 999999986644

>KOG0200|consensus

Probab=99.77  E-value=2.1e-18  Score=164.38  Aligned_cols=167  Identities=20%  Similarity=0.250  Sum_probs=130.4

Q ss_pred             cceEEEEEecccCceeEEEecce------------eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK------------TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~------------~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      .+..+.+.||+|.||.||+|...            ++++...     ...+.+..|+.+|+.+.+       |+|++.++
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~-------H~niv~ll  368 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGK-------HPNIVNLL  368 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcC-------Ccchhhhe
Confidence            34566779999999999998642            1222211     124567889999999875       58899999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhC------C--------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK------Y--------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTD  203 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------~--------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrD  203 (284)
                      ++..    ....+++|+||+ .|+|+.++...+      .        ..++..++..++.||+.|++||++. .+||||
T Consensus       369 G~~t----~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~-~~vHRD  443 (609)
T KOG0200|consen  369 GACT----QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV-PCVHRD  443 (609)
T ss_pred             eeec----cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-Cccchh
Confidence            9776    578899999999 889998888765      0        1288999999999999999999999 999999


Q ss_pred             CCCCCeeEeeCCCcEEEEeccchhHhhhCCCCC-CcccCCCC--ccchhhhhhcc
Q psy16752        204 IKPENVLLCVDEARVKTLALNATELAATGHKLP-VSFCSTAP--VQEYSELSRRM  255 (284)
Q Consensus       204 iKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~-~~~~gt~~--~~aPE~l~~~~  255 (284)
                      |-..|||+..+ ..++|+|||+|+......... ....++.|  |||||.+....
T Consensus       444 LAaRNVLi~~~-~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~  497 (609)
T KOG0200|consen  444 LAARNVLITKN-KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRV  497 (609)
T ss_pred             hhhhhEEecCC-CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCc
Confidence            99999999555 899999999998655443332 23334466  99999998643

>KOG0665|consensus

Probab=99.77  E-value=6.5e-19  Score=148.83  Aligned_cols=164  Identities=24%  Similarity=0.355  Sum_probs=129.6

Q ss_pred             cceEEEEEecccCceeEEEeccee-----EEEe------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE-
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-----QVLV------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI-  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-----~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~-  143 (284)
                      .||.-+..+|.|+- .|-.|.+..     +++.      .....+.+.+|..++..+.|        +|++.++..|.- 
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~--------~nii~l~n~ftP~   87 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNH--------KNIISLLNVFTPQ   87 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcc--------cceeeeeeccCcc
Confidence            47999999999998 565565521     2221      23345778899999999998        668988887741 


Q ss_pred             -eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 -CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 -~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                       ....-..+|+|||++..++.+.+...    ++-..+..++.|++.|+.|||+. ||+||||||+||++.. +..+++.|
T Consensus        88 ~~l~~~~e~y~v~e~m~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~-~~~lKi~d  161 (369)
T KOG0665|consen   88 KTLEEFQEVYLVMELMDANLCQVILME----LDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNS-DCTLKILD  161 (369)
T ss_pred             ccHHHHHhHHHHHHhhhhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecc-hhheeecc
Confidence             01123468999999999999988733    67889999999999999999999 9999999999999944 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+|...... ......+.|-.|.|||++-+..
T Consensus       162 fg~ar~e~~~-~~mtpyVvtRyyrapevil~~~  193 (369)
T KOG0665|consen  162 FGLARTEDTD-FMMTPYVVTRYYRAPEVILGMG  193 (369)
T ss_pred             chhhcccCcc-cccCchhheeeccCchheeccC
Confidence            9999877665 3444567899999999997765

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.76  E-value=9e-18  Score=139.73  Aligned_cols=160  Identities=30%  Similarity=0.422  Sum_probs=126.0

Q ss_pred             eEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      |.+...||.|++|.||++...     .+++....     ....+.+|+..++.+++        ++++++++.+.    .
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~--------~~i~~~~~~~~----~   68 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH--------PNIVKLYGVFE----D   68 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC--------CChhhheeeee----c
Confidence            567889999999999999763     23343322     34567789999999877        66888887665    5


Q ss_pred             CeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....++++|++.+ +|.+.+..... .+++..+..++.+++.+|.+||.. +++|+||+|.||+++.+ +.++++|||.+
T Consensus        69 ~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~-~~~~l~d~g~~  145 (225)
T smart00221       69 PEPLYLVMEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMD-GLVKLADFGLA  145 (225)
T ss_pred             CCceEEEEeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCC-CCEEEeeCcee
Confidence            6789999999955 88777765442 178999999999999999999999 99999999999999555 89999999988


Q ss_pred             hHhhhCC-CCCCcccCCCCccchhhhh
Q psy16752        227 ELAATGH-KLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       227 ~~~~~~~-~~~~~~~gt~~~~aPE~l~  252 (284)
                      ....... .......++..|++||.+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~pe~~~  172 (225)
T smart00221      146 RFIHRDLAALLKTVKGTPFYLAPEVLL  172 (225)
T ss_pred             eEecCcccccccceeccCCcCCHhHhc
Confidence            7665432 1223557888999999874

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1025|consensus

Probab=99.75  E-value=1.3e-18  Score=162.15  Aligned_cols=161  Identities=20%  Similarity=0.233  Sum_probs=128.5

Q ss_pred             eEEEEEecccCceeEEEecc---------eeEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS---------KTQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .+..++||+|+||+||++.+         .+++++..     +....++.|.-+|..++|        +|++++++... 
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldH--------pnl~RLLgvc~-  768 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDH--------PNLLRLLGVCM-  768 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCC--------chHHHHhhhcc-
Confidence            45668999999999999976         22444432     234678899999999999        67999998764 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                          ...+-||++|+ .|.|++++..++ ..+...+.+.|..||+.|+.|||.+ .+|||||-..|+||.. ..++++.|
T Consensus       769 ----~s~~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q-rlVHrdLaaRNVLVks-P~hvkitd  841 (1177)
T KOG1025|consen  769 ----LSTLQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ-RLVHRDLAARNVLVKS-PNHVKITD  841 (1177)
T ss_pred             ----cchHHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc-chhhhhhhhhheeecC-CCeEEEEe
Confidence                33477999999 788888888765 3599999999999999999999999 9999999999999944 48999999


Q ss_pred             ccchhHhhhCCCCCC--cccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPV--SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~--~~~gt~~~~aPE~l~~~  254 (284)
                      ||+++...+....-.  .....++|||-|.+...
T Consensus       842 fgla~ll~~d~~ey~~~~gK~pikwmale~i~~~  875 (1177)
T KOG1025|consen  842 FGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIR  875 (1177)
T ss_pred             cchhhccCcccccccccccccCcHHHHHHHhhcc
Confidence            999998776644332  23456778888877543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.75  E-value=4.7e-18  Score=138.96  Aligned_cols=129  Identities=17%  Similarity=0.114  Sum_probs=91.8

Q ss_pred             eEEEEEecccCceeEEEeccee---E---EEecCCCCh-----hhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT---Q---VLVSPQFPE-----TALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~---~---~~~~~~~~~-----~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.+...|++|+||+||++....   .   +........     .+.+|+++|+++.+.       ++++.++++      
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~-------~~vP~ll~~------   70 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL-------PRTPRLLHW------   70 (218)
T ss_pred             cccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC-------CCCCEEEEE------
Confidence            3456799999999999886522   2   222333223     467899999999762       446666553      


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCC-CCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI-KPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDi-Kp~NIll~~~~~~v~l~Dfg~  225 (284)
                        ...|++|+|+.|..+....       +.. ...++.|++.+|.++|.+ ||||||| ||+|||++.+ +.++|+|||+
T Consensus        71 --~~~~lvmeyI~G~~L~~~~-------~~~-~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~-g~i~LIDFG~  138 (218)
T PRK12274         71 --DGRHLDRSYLAGAAMYQRP-------PRG-DLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQED-GSPAVIDFQL  138 (218)
T ss_pred             --cCEEEEEeeecCccHHhhh-------hhh-hHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCC-CCEEEEECCC
Confidence              2358999999554432211       111 235788999999999999 9999999 7999999654 7899999999


Q ss_pred             hhHhhh
Q psy16752        226 TELAAT  231 (284)
Q Consensus       226 a~~~~~  231 (284)
                      +.....
T Consensus       139 A~~~~~  144 (218)
T PRK12274        139 AVRGNP  144 (218)
T ss_pred             ceecCC
Confidence            875443

>smart00090 RIO RIO-like kinase

Probab=99.73  E-value=1.6e-17  Score=140.53  Aligned_cols=135  Identities=16%  Similarity=0.139  Sum_probs=96.0

Q ss_pred             ceEEEEEecccCceeEEEec-c-----eeEEEecCCCC----------------------------hhhHHHHHHHHhhh
Q psy16752         77 RYRVTRKLGWGHFSTVWFTG-S-----KTQVLVSPQFP----------------------------ETALDEIKLLKCVR  122 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~-~-----~~~~~~~~~~~----------------------------~~~~~E~~~l~~l~  122 (284)
                      -|++.+.||.|+||.||+|. +     .+++|+.....                            ..+.+|..++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            38899999999999999998 2     23444432110                            12457889999887


Q ss_pred             cCCCCCcccchhccccccceEeccCCeEEEEEeccCCccHH-HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC-cE
Q psy16752        123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLL-KLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR-II  200 (284)
Q Consensus       123 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~-~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g-iv  200 (284)
                      +..      ..++.++..        ...++||||++|..+ ......  ..+....+..++.||+.+|.+||.. | |+
T Consensus       109 ~~~------i~~p~~~~~--------~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~-g~ii  171 (237)
T smart00090      109 EAG------VPVPKPIAW--------RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE-GELV  171 (237)
T ss_pred             hcC------CCCCeeeEe--------cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc-CCEE
Confidence            522      112222221        124799999976443 332222  2366677889999999999999999 9 99


Q ss_pred             ecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        201 HTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       201 HrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      ||||||+||+++  ++.++++|||.+....
T Consensus       172 H~Dikp~NIli~--~~~i~LiDFg~a~~~~  199 (237)
T smart00090      172 HGDLSEYNILVH--DGKVVIIDVSQSVELD  199 (237)
T ss_pred             eCCCChhhEEEE--CCCEEEEEChhhhccC
Confidence            999999999996  5789999999876443

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.70  E-value=1.5e-16  Score=133.38  Aligned_cols=148  Identities=31%  Similarity=0.460  Sum_probs=116.7

Q ss_pred             CceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEecc
Q psy16752         88 HFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV  157 (284)
Q Consensus        88 ~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~  157 (284)
                      +||.||+|.+.     .++++....     ...+.+|+.+++.+.|        ++++++++.+.    .....++++||
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~--------~~i~~~~~~~~----~~~~~~l~~e~   68 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH--------PNIVRLYDVFE----DEDKLYLVMEY   68 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC--------CcHHHHHhhee----eCCEEEEEEeC
Confidence            57888888763     234432221     4677889999999977        66888888766    56789999999


Q ss_pred             CCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCC
Q psy16752        158 LGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLP  236 (284)
Q Consensus       158 ~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~  236 (284)
                      +++ +|...+....  .++...+..++.+++.+|.+||.. +++|+||+|.||+++.+ +.++++|||.+....... ..
T Consensus        69 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~-~~~~l~d~~~~~~~~~~~-~~  143 (244)
T smart00220       69 CDGGDLFDLLKKRG--RLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDED-GHVKLADFGLARQLDPGG-LL  143 (244)
T ss_pred             CCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCC-CcEEEccccceeeecccc-cc
Confidence            955 7777776543  289999999999999999999999 99999999999999655 899999999987665432 23


Q ss_pred             CcccCCCCccchhhhh
Q psy16752        237 VSFCSTAPVQEYSELS  252 (284)
Q Consensus       237 ~~~~gt~~~~aPE~l~  252 (284)
                      ....++..|++||.+.
T Consensus       144 ~~~~~~~~~~~pE~~~  159 (244)
T smart00220      144 TTFVGTPEYMAPEVLL  159 (244)
T ss_pred             ccccCCcCCCCHHHHc
Confidence            3556888999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.68  E-value=5.3e-16  Score=134.68  Aligned_cols=165  Identities=32%  Similarity=0.441  Sum_probs=126.2

Q ss_pred             eEEEEEecccCceeEEEecce--eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK--TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~--~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      |.+...||.|+||.||++.+.  .+++....       ....+.+|+.++..+.++       ++++.+++.+.    ..
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-------~~i~~~~~~~~----~~   70 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHP-------PNIVKLYDFFQ----DE   70 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCC-------cceeeEEEEEe----cC
Confidence            788899999999999999875  22222111       245678889999998873       25777777664    55


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ...+++++++ ++.+.+.+..... ..++...+..++.|++.++.|+|.. +++|||+||+||+++.....++++|||.+
T Consensus        71 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~~~~l~dfg~~  149 (384)
T COG0515          71 GSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGRVVKLIDFGLA  149 (384)
T ss_pred             CEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCCeEEEeccCcc
Confidence            5589999999 4555534433321 1489999999999999999999999 99999999999999666447999999998


Q ss_pred             hHhhhCCC------CCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHK------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ........      ......||..|++||.+.+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~  183 (384)
T COG0515         150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGL  183 (384)
T ss_pred             eecCCCCccccccccccccccccccCCHHHhcCC
Confidence            75544332      23577899999999999874

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.67  E-value=5.4e-16  Score=128.79  Aligned_cols=127  Identities=19%  Similarity=0.270  Sum_probs=92.1

Q ss_pred             EEecccCceeEEEecc---eeEEEecCCC------------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         82 RKLGWGHFSTVWFTGS---KTQVLVSPQF------------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~---~~~~~~~~~~------------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.||+|++|.||+|.+   ...++.....            ...+.+|+.++..+.+.++        ......+.    
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i--------~~p~~~~~----   69 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGV--------NVPAVYFV----   69 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCC--------CCCeEEEE----
Confidence            5789999999999964   3344432211            1245678899999887442        22222121    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .....++||||+ +++|.+.+...     .. ....++.+++.+|.+||.. |++|+|++|.|||++  .+.++++|||.
T Consensus        70 ~~~~~~lv~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~--~~~~~liDf~~  140 (211)
T PRK14879         70 DPENFIIVMEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS--GGKIYLIDFGL  140 (211)
T ss_pred             eCCCCEEEEEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE--CCCEEEEECCc
Confidence            344578999999 55666665432     12 7788999999999999999 999999999999996  57899999998


Q ss_pred             hhHh
Q psy16752        226 TELA  229 (284)
Q Consensus       226 a~~~  229 (284)
                      +...
T Consensus       141 a~~~  144 (211)
T PRK14879        141 AEFS  144 (211)
T ss_pred             ccCC
Confidence            8753

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.66  E-value=3.6e-16  Score=147.42  Aligned_cols=130  Identities=17%  Similarity=0.213  Sum_probs=93.4

Q ss_pred             ceEEEEEecccCceeEEEeccee---EEE--ecCCC----------ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT---QVL--VSPQF----------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~---~~~--~~~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .|...+.||+|+||+||++.+..   .++  +....          ...+.+|+.++..+++++        ++......
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~--------i~~p~~~~  405 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAG--------VPTPVIYD  405 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccC--------CCeeEEEE
Confidence            35667899999999999976521   111  11111          134678999999998844        33322221


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    .....++||||+ +++|.+.+.          ....++.+++.+|.+||+. |++||||||+|||+ . ++.+++
T Consensus       406 ~----~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NILl-~-~~~~~l  468 (535)
T PRK09605        406 V----DPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFIV-R-DDRLYL  468 (535)
T ss_pred             E----eCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEEE-E-CCcEEE
Confidence            1    334568999999 556655553          3467899999999999999 99999999999999 3 478999


Q ss_pred             EeccchhHhhh
Q psy16752        221 LALNATELAAT  231 (284)
Q Consensus       221 ~Dfg~a~~~~~  231 (284)
                      +|||++.....
T Consensus       469 iDFGla~~~~~  479 (535)
T PRK09605        469 IDFGLGKYSDL  479 (535)
T ss_pred             EeCcccccCCc
Confidence            99999876543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.65  E-value=1.3e-16  Score=157.09  Aligned_cols=119  Identities=14%  Similarity=0.171  Sum_probs=86.7

Q ss_pred             hhccccccceEecc---CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCe
Q psy16752        133 RVVQLLDDFKICGV---NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV  209 (284)
Q Consensus       133 ~i~~l~~~~~~~~~---~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NI  209 (284)
                      +|+.++++|....+   ....++++||+++++|.+.+.... ..+++..++.++.||+.||.|||++ |||||||||+||
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-gIvHrDlKP~Ni  111 (793)
T PLN00181         34 YVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQ-GIVVHNVRPSCF  111 (793)
T ss_pred             HHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhC-CeeeccCCchhE
Confidence            46667776643332   335678889999999998886532 4599999999999999999999999 999999999999


Q ss_pred             eEee------------------CCCcEEEEeccchhHhhhCC----------------CCCCcccCCCCccchhhhhh
Q psy16752        210 LLCV------------------DEARVKTLALNATELAATGH----------------KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       210 ll~~------------------~~~~v~l~Dfg~a~~~~~~~----------------~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||+.                  ....++++|||+++......                ......+||+.|||||++.+
T Consensus       112 Ll~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  189 (793)
T PLN00181        112 VMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG  189 (793)
T ss_pred             EEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc
Confidence            9953                  23456677777665321100                00112468999999999864

>KOG1166|consensus

Probab=99.65  E-value=6.9e-16  Score=149.69  Aligned_cols=170  Identities=18%  Similarity=0.188  Sum_probs=120.1

Q ss_pred             eeccceEEEEEecccCceeEEEecce----eEEEec-CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVS-PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      +-+..|.|...||+|+||.||+|...    .++|+- +...-.++-=.+++.+|+ +...    +.|..+..++.    .
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~~~----~~~~~~~~a~~----~  765 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-PQML----PSIMHISSAHV----F  765 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-hhhh----cchHHHHHHHc----c
Confidence            33567999999999999999999873    244442 222233333345555665 1111    22333333333    4


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee------CCCcEEE
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV------DEARVKT  220 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~------~~~~v~l  220 (284)
                      .+.-++|++|. .|+|++++...  +.+++..+..+..|++.-|+.||.. +|||+||||+|+||..      +...++|
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~~~~~~~~l~l  842 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREICADSDSKGLYL  842 (974)
T ss_pred             CCcceeeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccCCCCcccceEE
Confidence            55678999999 78899888743  4699999999999999999999999 9999999999999952      3458999


Q ss_pred             EeccchhHh--hhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELA--ATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~--~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||-+.-.  -+........+.|-.+-.+|+++|+
T Consensus       843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr  878 (974)
T KOG1166|consen  843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR  878 (974)
T ss_pred             EecccceeeeEcCCCcEEeeeeccccchhHHHhcCC
Confidence            999976522  2222334456777777778887765

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.64  E-value=1.2e-15  Score=125.59  Aligned_cols=124  Identities=18%  Similarity=0.277  Sum_probs=87.9

Q ss_pred             EecccCceeEEEecce---eEEEecCCC------------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         83 KLGWGHFSTVWFTGSK---TQVLVSPQF------------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~---~~~~~~~~~------------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .||+|+||.||++...   ..++.....            ...+.+|+.++..+.+.++.      ++.++..      .
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~------~p~~~~~------~   68 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVN------TPVVYDV------D   68 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCC------CCEEEEE------E
Confidence            3799999999999852   233332111            13345799999999875422      2222221      3


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....++||||+ ++++.+.+....   .      .++.+++.+|.+||.. |++|+|++|+||+++  .+.++++|||++
T Consensus        69 ~~~~~lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~--~~~~~liDfg~a  136 (199)
T TIGR03724        69 PDNKTIVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR--DDKLYLIDFGLG  136 (199)
T ss_pred             CCCCEEEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE--CCcEEEEECCCC
Confidence            34568999999 555555543221   1      7889999999999999 999999999999996  589999999988


Q ss_pred             hHhh
Q psy16752        227 ELAA  230 (284)
Q Consensus       227 ~~~~  230 (284)
                      ....
T Consensus       137 ~~~~  140 (199)
T TIGR03724       137 KYSD  140 (199)
T ss_pred             cCCC
Confidence            7543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0590|consensus

Probab=99.62  E-value=3.5e-16  Score=148.00  Aligned_cols=101  Identities=19%  Similarity=0.311  Sum_probs=85.5

Q ss_pred             EEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhC
Q psy16752        153 MVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATG  232 (284)
Q Consensus       153 iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~  232 (284)
                      -+|||+.++|+.++.+..  .+...++.+++.|++.||.|||.. ||.|||+||+|+++..+ +.++|+|||.+....-+
T Consensus       398 ~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~-g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  398 QSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTEN-GILKIIDFGAASVFRYP  473 (601)
T ss_pred             hhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecC-CceEEeecCcceeeccC
Confidence            339999778888887763  489999999999999999999999 99999999999999666 79999999988766544


Q ss_pred             CC----CCCcccCCCCccchhhhhhccch
Q psy16752        233 HK----LPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       233 ~~----~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      ..    ....++|+.||+|||++.+.-.+
T Consensus       474 ~e~~~~~~~g~~gS~pY~apE~~~~~~yd  502 (601)
T KOG0590|consen  474 WEKNIHESSGIVGSDPYLAPEVLTGKEYD  502 (601)
T ss_pred             cchhhhhhcCcccCCcCcCcccccccccC
Confidence            33    23478999999999999876544

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.61  E-value=2.5e-15  Score=123.79  Aligned_cols=128  Identities=18%  Similarity=0.190  Sum_probs=90.4

Q ss_pred             eEEEEEecccCceeEEEecce----eEEEecCCC--------------------------ChhhHHHHHHHHhhhcCCCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF--------------------------PETALDEIKLLKCVRDGDVN  127 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~--------------------------~~~~~~E~~~l~~l~~~~~~  127 (284)
                      |.+.+.||+|+||.||++...    .++|+....                          ......|..++..+.+.++ 
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF-   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC-
Confidence            888899999999999999762    244432110                          1124667888888876421 


Q ss_pred             CcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       128 ~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                           .++..+.        ....++||||+.|..+..+..       ......++.+++.++.++|.. ||+||||+|+
T Consensus        96 -----~v~~~~~--------~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~-gi~H~Dl~p~  154 (198)
T cd05144          96 -----PVPKPID--------WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKH-GIIHGDLSEF  154 (198)
T ss_pred             -----CCCceee--------cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHC-CCCcCCCCcc
Confidence                 1222222        123589999996654433321       134567889999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhH
Q psy16752        208 NVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ||+++. ++.++++|||.+..
T Consensus       155 Nill~~-~~~~~liDfg~~~~  174 (198)
T cd05144         155 NILVDD-DEKIYIIDWPQMVS  174 (198)
T ss_pred             cEEEcC-CCcEEEEECCcccc
Confidence            999955 58999999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.58  E-value=5.8e-15  Score=115.03  Aligned_cols=132  Identities=17%  Similarity=0.202  Sum_probs=98.5

Q ss_pred             EEEEecccCceeEEEecc---eeEEEecCCCC--hhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEE
Q psy16752         80 VTRKLGWGHFSTVWFTGS---KTQVLVSPQFP--ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMV  154 (284)
Q Consensus        80 i~~~LG~G~fg~Vy~a~~---~~~~~~~~~~~--~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv  154 (284)
                      +++.||.|.++.||++..   ...++......  ..+.+|+.+++.+.+..      ..+++++....    .....+++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~------~~~p~~~~~~~----~~~~~~~v   71 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKG------LPVPKVLASGE----SDGWSYLL   71 (155)
T ss_pred             cceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcC------CCCCeEEEEcC----CCCccEEE
Confidence            457899999999999987   44555544333  46889999999998741      23555555443    44678999


Q ss_pred             eccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        155 FEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC--RIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       155 ~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      |||+.|.....+        +......++.+++.+|.+||...  +++|+|++|+||+++. .+.++++||+.+....
T Consensus        72 ~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~-~~~~~l~Df~~~~~~~  140 (155)
T cd05120          72 MEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD-GKILGIIDWEYAGYGP  140 (155)
T ss_pred             EEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC-CcEEEEEecccccCCC
Confidence            999966543222        44566778899999999999841  6999999999999965 5899999999876443

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.56  E-value=2e-14  Score=117.06  Aligned_cols=74  Identities=20%  Similarity=0.282  Sum_probs=56.2

Q ss_pred             EEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        150 HVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       150 ~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..++||||+++ .+........   .....+..++.+++.++.++|. . +|+||||||+||+++  ++.++++|||.+.
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~lh~~~-~ivH~Dl~p~Nili~--~~~~~liDfg~a~  162 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDV---RLLEDPEELYDQILELMRKLYREA-GLVHGDLSEYNILVD--DGKVYIIDVPQAV  162 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhh---hhcccHHHHHHHHHHHHHHHhhcc-CcCcCCCChhhEEEE--CCcEEEEECcccc
Confidence            35899999965 2211111111   0116678899999999999999 8 999999999999997  5899999999985


Q ss_pred             Hh
Q psy16752        228 LA  229 (284)
Q Consensus       228 ~~  229 (284)
                      ..
T Consensus       163 ~~  164 (187)
T cd05119         163 EI  164 (187)
T ss_pred             cc
Confidence            43

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.55  E-value=6.8e-14  Score=118.52  Aligned_cols=105  Identities=19%  Similarity=0.244  Sum_probs=73.1

Q ss_pred             hhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCCc--cHHHHHHhhCCCCCCHHHHHHHHHHH
Q psy16752        109 ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH--NLLKLIVKSKYRGIPLENVRSIIRQI  186 (284)
Q Consensus       109 ~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~~~~~~~~~i~~qi  186 (284)
                      ..+.+|+.++..+.+.++.      ++..+.............++|||++.|  +|.+.+...   .++...    +.+|
T Consensus        85 ~r~~rE~~ll~~L~~~gi~------vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i  151 (239)
T PRK01723         85 TRAFAEFRLLAQLYEAGLP------VPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAI  151 (239)
T ss_pred             hHHHHHHHHHHHHHhCCCC------CceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHH
Confidence            4577899999999985532      233333222111111234699999954  566555432   355543    5789


Q ss_pred             HHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        187 LQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       187 ~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      +.+|.+||.. ||+||||||+|||++.+ +.++++|||.+..
T Consensus       152 ~~~l~~lH~~-GI~HrDlkp~NILv~~~-~~v~LIDfg~~~~  191 (239)
T PRK01723        152 GQLIARFHDA-GVYHADLNAHNILLDPD-GKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHHHC-CCCCCCCCchhEEEcCC-CCEEEEECCCccc
Confidence            9999999999 99999999999999654 6899999998754

>KOG4158|consensus

Probab=99.49  E-value=2.5e-14  Score=124.70  Aligned_cols=127  Identities=16%  Similarity=0.203  Sum_probs=96.5

Q ss_pred             CcccchhccccccceEe-----------------------ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHH
Q psy16752        128 DPYRERVVQLLDDFKIC-----------------------GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR  184 (284)
Q Consensus       128 ~~~~~~i~~l~~~~~~~-----------------------~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~  184 (284)
                      -+.||||+.++.+|...                       -.....+|+||..+..+|.+++..+.   .+.....-++.
T Consensus       272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~la  348 (598)
T KOG4158|consen  272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILA  348 (598)
T ss_pred             cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHH
Confidence            35678999988877421                       01335699999999999999998765   67888888999


Q ss_pred             HHHHHHHHHhhCCCcEecCCCCCCeeEeeCC---CcEEEEeccchhHhhhC-CC-----CCCcccCCCCccchhhhhhcc
Q psy16752        185 QILQGLNYLHTKCRIIHTDIKPENVLLCVDE---ARVKTLALNATELAATG-HK-----LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       185 qi~~aL~~LH~~~givHrDiKp~NIll~~~~---~~v~l~Dfg~a~~~~~~-~~-----~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |+++|+.|||.+ ||.|||+|++|||+.-++   ..+.+.|||.|.-.... ..     ......|-+.-||||+.+-.=
T Consensus       349 QlLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P  427 (598)
T KOG4158|consen  349 QLLEAVTHLHKH-GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP  427 (598)
T ss_pred             HHHHHHHHHHHc-cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence            999999999999 999999999999997553   38899999976532221 11     112446888899999887544


Q ss_pred             chh
Q psy16752        256 SKN  258 (284)
Q Consensus       256 ~~~  258 (284)
                      .++
T Consensus       428 Gp~  430 (598)
T KOG4158|consen  428 GPN  430 (598)
T ss_pred             CCc
Confidence            433

>KOG0603|consensus

Probab=99.46  E-value=1.2e-14  Score=133.10  Aligned_cols=158  Identities=20%  Similarity=0.271  Sum_probs=121.2

Q ss_pred             EecccCceeEEEeccee--------EEEe------cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         83 KLGWGHFSTVWFTGSKT--------QVLV------SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~~~--------~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      .+|.|+||.|++++.-.        +.++      ..........|..++..++.       ++.++.+..+|+    ..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~-------~~f~v~lhyafq----t~   69 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHN-------TPFLVKLHYAFQ----TD   69 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccC-------CCceeeeeeeec----cc
Confidence            36899999999875411        1111      11111134456677777663       266888888887    88


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..++++++++ +|.++..+....  .+.+.....+...++.+++++|.. +|+|||+|++||+++.+ |++++.|||+++
T Consensus        70 ~kl~l~ld~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~-Ghi~~tdfglsk  145 (612)
T KOG0603|consen   70 GKLYLILDFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLE-GHIKLTDFGLSK  145 (612)
T ss_pred             cchhHhhhhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeeccc-CccccCCchhhh
Confidence            8999999999 678877776554  488899999999999999999999 99999999999999555 999999999999


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhccchhh
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRRMSKNK  259 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~~~  259 (284)
                      ........    |||..|||||++.+......
T Consensus       146 e~v~~~~~----cgt~eymApEI~~gh~~a~D  173 (612)
T KOG0603|consen  146 EAVKEKIA----CGTYEYRAPEIINGHLSAAD  173 (612)
T ss_pred             HhHhhhhc----ccchhhhhhHhhhccCCccc
Confidence            87765433    99999999999996655443

>KOG3087|consensus

Probab=99.40  E-value=6.2e-12  Score=99.61  Aligned_cols=141  Identities=16%  Similarity=0.171  Sum_probs=100.6

Q ss_pred             EEEEecccCceeEEEecceeEEEecCC---------------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         80 VTRKLGWGHFSTVWFTGSKTQVLVSPQ---------------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        80 i~~~LG~G~fg~Vy~a~~~~~~~~~~~---------------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .+..|-+|+.+.|+++.+.....+.+.               ...+..+|.+++.++....+..|.      ++.    +
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~------l~~----~   80 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPR------LIF----I   80 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCce------EEE----E
Confidence            567889999999999987543322111               134457799999988875433222      221    1


Q ss_pred             ccCCeEEEEEeccCCc--cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE--EE
Q psy16752        145 GVNGTHVCMVFEVLGH--NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV--KT  220 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v--~l  220 (284)
                        +...-+|+|||+.|  ++.+++...............++++|-+.|.-||.. +|||+||..+||++.+++..+  .+
T Consensus        81 --D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~~~~~~~~l  157 (229)
T KOG3087|consen   81 --DTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSDGNQITPIL  157 (229)
T ss_pred             --ecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecCCCcCceEE
Confidence              33445789999977  667777765543344444578899999999999999 999999999999998886655  99


Q ss_pred             EeccchhHhhhCC
Q psy16752        221 LALNATELAATGH  233 (284)
Q Consensus       221 ~Dfg~a~~~~~~~  233 (284)
                      +|||++.......
T Consensus       158 Idfgls~~s~~~E  170 (229)
T KOG3087|consen  158 IDFGLSSVSRLPE  170 (229)
T ss_pred             EeecchhcccCcc
Confidence            9999988665443

>KOG1024|consensus

Probab=99.39  E-value=1.9e-12  Score=112.77  Aligned_cols=170  Identities=16%  Similarity=0.143  Sum_probs=118.4

Q ss_pred             ccceEEEEEecccCceeEEEecceeE----------EEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKTQ----------VLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~~----------~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      ..|+++...+-+|.||+||.|.++..          +|..     .-....++.|...+..+.|        +|+.++.+
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH--------~nll~V~~  354 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASH--------PNLLSVLG  354 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcC--------CCccceeE
Confidence            46789999999999999999965321          0101     1112334556666666666        66777666


Q ss_pred             cceEeccCCeEEEEEeccCC-ccHHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe
Q psy16752        140 DFKICGVNGTHVCMVFEVLG-HNLLKLIVKSK------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC  212 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~  212 (284)
                      ....   .....+.++.+.+ |+|..++...+      .+.++..++..++.|++.|++|||.. ||||.||...|.+| 
T Consensus       355 V~ie---~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAaRNCvI-  429 (563)
T KOG1024|consen  355 VSIE---DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAARNCVI-  429 (563)
T ss_pred             EEee---ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-Ccccchhhhhccee-
Confidence            4331   4555667778884 66666666322      23477888999999999999999999 99999999999999 


Q ss_pred             eCCCcEEEEeccchhHhhhCCCCCC--cccCCCCccchhhhhhccch
Q psy16752        213 VDEARVKTLALNATELAATGHKLPV--SFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       213 ~~~~~v~l~Dfg~a~~~~~~~~~~~--~~~gt~~~~aPE~l~~~~~~  257 (284)
                      .|.-.++++|-.+++-.-+..-..-  ...-...||+||.+..+...
T Consensus       430 dd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~ys  476 (563)
T KOG1024|consen  430 DDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYS  476 (563)
T ss_pred             hhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhc
Confidence            5558999999999885444321111  22234569999999876544

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.26  E-value=3e-11  Score=96.53  Aligned_cols=125  Identities=15%  Similarity=0.087  Sum_probs=84.5

Q ss_pred             EEEecccCceeEEEecce---eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEE
Q psy16752         81 TRKLGWGHFSTVWFTGSK---TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMV  154 (284)
Q Consensus        81 ~~~LG~G~fg~Vy~a~~~---~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv  154 (284)
                      ++.|+.|.++.||++...   ..+|.....   .....+|..+++.+.....       +..++...      ....++|
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~-------~P~~~~~~------~~~~~lv   69 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGI-------GPKLYYFD------PETGVLI   69 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCC-------CCceEEEe------CCCCeEE
Confidence            367889999999988653   445543332   2346789999999876321       22233221      1224799


Q ss_pred             eccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCc-----EecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        155 FEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRI-----IHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       155 ~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~gi-----vHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      |||+.|..+...   .   .   ....++.+++.+|..||.. ++     +|+|++|.||+++  ++.++++||+.+...
T Consensus        70 ~e~i~G~~l~~~---~---~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~--~~~~~liDf~~a~~~  137 (170)
T cd05151          70 TEFIEGSELLTE---D---F---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD--DGRLWLIDWEYAGMN  137 (170)
T ss_pred             EEecCCCccccc---c---c---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE--CCeEEEEecccccCC
Confidence            999966433211   0   1   1134567899999999998 75     9999999999996  468999999987643


Q ss_pred             h
Q psy16752        230 A  230 (284)
Q Consensus       230 ~  230 (284)
                      .
T Consensus       138 ~  138 (170)
T cd05151         138 D  138 (170)
T ss_pred             C
Confidence            3

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1240|consensus

Probab=99.23  E-value=1.4e-12  Score=125.92  Aligned_cols=162  Identities=17%  Similarity=0.176  Sum_probs=116.6

Q ss_pred             ceEEEEEecccCceeEEEeccee---EEEecCC-----CChhhH---HHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT---QVLVSPQ-----FPETAL---DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~---~~~~~~~-----~~~~~~---~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .|...+.||++.|=.|.+|.++.   .+|+...     ....+.   .|+. ...+++        ||.+++.-+..   
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~--------pn~lPfqk~~~---   91 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKA--------PNCLPFQKVLV---   91 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcC--------CcccchHHHHH---
Confidence            48888999999999999998853   3333111     122232   3333 333444        55555544433   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....|+|-+|...+|++.+..++.  +..-+-+.|+-||+.||.-+|.. ||+|+|||.+||||++= ..+.|.||+.
T Consensus        92 -t~kAAylvRqyvkhnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSW-NW~~LtDFAs  166 (1431)
T KOG1240|consen   92 -TDKAAYLVRQYVKHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSW-NWLYLTDFAS  166 (1431)
T ss_pred             -hhHHHHHHHHHHhhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeee-chhhhhcccc
Confidence             6667788889999999999987664  67777888999999999999999 99999999999999765 7899999998


Q ss_pred             hhHhhhCCCCCCcc-------cCCCCccchhhhhhcc
Q psy16752        226 TELAATGHKLPVSF-------CSTAPVQEYSELSRRM  255 (284)
Q Consensus       226 a~~~~~~~~~~~~~-------~gt~~~~aPE~l~~~~  255 (284)
                      .+..--+...+..+       .-..-|+|||.+..+.
T Consensus       167 FKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~  203 (1431)
T KOG1240|consen  167 FKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSAL  203 (1431)
T ss_pred             cCCccCCCCCcccceEEEecCCceeeecChHhhhccc
Confidence            76544344444322       3345689999887765

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.20  E-value=1.8e-10  Score=91.63  Aligned_cols=128  Identities=20%  Similarity=0.291  Sum_probs=88.0

Q ss_pred             EecccCceeEEEecc---eeEEEec--CCC----------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         83 KLGWGHFSTVWFTGS---KTQVLVS--PQF----------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        83 ~LG~G~fg~Vy~a~~---~~~~~~~--~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .+++|+-+.||.+.+   ...+|.-  +.+          .....+|.+++..+....+..|      .+++.      +
T Consensus         3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P------~v~dv------D   70 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVP------IVYDV------D   70 (204)
T ss_pred             hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCC------eEEEE------c
Confidence            578899999988843   2233321  111          2345678889998887553333      23332      4


Q ss_pred             CeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        148 GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       148 ~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...-.|+|||++|.++.......        ...++..|-.-+.-||.. ||||+||.+.||++..  +.+.++|||++.
T Consensus        71 ~~~~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~--~~i~~IDfGLg~  139 (204)
T COG3642          71 PDNGLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSG--GRIYFIDFGLGE  139 (204)
T ss_pred             CCCCEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeC--CcEEEEECCccc
Confidence            44567999999888877554432        134566777778899999 9999999999999943  459999999988


Q ss_pred             HhhhCC
Q psy16752        228 LAATGH  233 (284)
Q Consensus       228 ~~~~~~  233 (284)
                      +.....
T Consensus       140 ~s~~~E  145 (204)
T COG3642         140 FSDEVE  145 (204)
T ss_pred             ccccHH
Confidence            665543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.18  E-value=1.3e-10  Score=94.82  Aligned_cols=97  Identities=16%  Similarity=0.252  Sum_probs=70.1

Q ss_pred             HHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCCcc-HHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q psy16752        112 LDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHN-LLKLIVKSKYRGIPLENVRSIIRQILQGL  190 (284)
Q Consensus       112 ~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~-l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  190 (284)
                      .+|.+.|.++....+..      +..+..        ..-+|||||++++ +.....+..  .++...+..++.+++.+|
T Consensus        74 ~kE~r~L~rl~~~Gv~v------P~pi~~--------~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l  137 (197)
T cd05146          74 EKEMHNLKRMQKAGIPC------PEVVVL--------KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMM  137 (197)
T ss_pred             HHHHHHHHHHHHcCCCC------CeEEEe--------cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHH
Confidence            37999999998755333      233321        2357999999763 222222221  255667788889999999


Q ss_pred             HHH-hhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        191 NYL-HTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       191 ~~L-H~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..| |.. ||||+||++.|||+. + +.+.++|||.+-
T Consensus       138 ~~l~H~~-glVHGDLs~~NIL~~-~-~~v~iIDF~qav  172 (197)
T cd05146         138 KQLYKEC-NLVHADLSEYNMLWH-D-GKVWFIDVSQSV  172 (197)
T ss_pred             HHHHHhC-CeecCCCCHHHEEEE-C-CcEEEEECCCce
Confidence            998 788 999999999999994 3 689999999764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.17  E-value=7e-11  Score=94.98  Aligned_cols=79  Identities=16%  Similarity=0.168  Sum_probs=63.4

Q ss_pred             ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcc
Q psy16752        160 HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSF  239 (284)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~  239 (284)
                      |+|.+.+.... ..+++..+..++.||+.||.|||++ +      ||+|||++. ++.+++  ||.+......     ..
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~-~~~~~~--fG~~~~~~~~-----~~   64 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTW-DGLLKL--DGSVAFKTPE-----QS   64 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcC-ccceee--ccceEeeccc-----cC
Confidence            57777776543 3599999999999999999999999 7      999999954 477888  9987765443     22


Q ss_pred             cCCCCccchhhhhhc
Q psy16752        240 CSTAPVQEYSELSRR  254 (284)
Q Consensus       240 ~gt~~~~aPE~l~~~  254 (284)
                      .||+.|+|||++.+.
T Consensus        65 ~g~~~y~aPE~~~~~   79 (176)
T smart00750       65 RVDPYFMAPEVIQGQ   79 (176)
T ss_pred             CCcccccChHHhcCC
Confidence            689999999998553

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.15  E-value=1.2e-10  Score=106.92  Aligned_cols=75  Identities=13%  Similarity=0.292  Sum_probs=52.2

Q ss_pred             EEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHH-HHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        150 HVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQ-GLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       150 ~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~-aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..++||||+.| ++.+...... ...+   ...++.+++. .+..+|.. |++|+|++|.||++.. ++.++++|||.+.
T Consensus       232 ~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~-g~~H~D~hPgNilv~~-~g~i~liDfG~~~  305 (437)
T TIGR01982       232 ERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRD-GFFHADLHPGNIFVLK-DGKIIALDFGIVG  305 (437)
T ss_pred             CceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhC-CceeCCCCcccEEECC-CCcEEEEeCCCee
Confidence            46899999955 4444433221 1132   2345555555 46788999 9999999999999954 4899999999876


Q ss_pred             Hhh
Q psy16752        228 LAA  230 (284)
Q Consensus       228 ~~~  230 (284)
                      ...
T Consensus       306 ~l~  308 (437)
T TIGR01982       306 RLS  308 (437)
T ss_pred             ECC
Confidence            443

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.13  E-value=4.1e-10  Score=96.91  Aligned_cols=99  Identities=20%  Similarity=0.149  Sum_probs=61.4

Q ss_pred             EEEEeccCCccHHHHHHh---hCCCC--CCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        151 VCMVFEVLGHNLLKLIVK---SKYRG--IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       151 ~~iv~e~~~~~l~~~~~~---~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .+++|+-+.++|.+.+..   .....  .....-..+..|++..+.+||+. |+||+||+|+|++++.+ +.+.|.||+.
T Consensus       114 ~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-GlVHgdi~~~nfll~~~-G~v~Lg~F~~  191 (288)
T PF14531_consen  114 RFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GLVHGDIKPENFLLDQD-GGVFLGDFSS  191 (288)
T ss_dssp             EEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEE-TT-S-EEE--GGG
T ss_pred             hhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ceEecccceeeEEEcCC-CCEEEcChHH
Confidence            477888888888776543   22110  12222344558999999999999 99999999999999665 9999999987


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ....+.....   ...+..|.+||.....
T Consensus       192 ~~r~g~~~~~---~~~~~~~~PPe~~~~~  217 (288)
T PF14531_consen  192 LVRAGTRYRC---SEFPVAFTPPELESCA  217 (288)
T ss_dssp             EEETTEEEEG---GGS-TTTS-HHHHHHH
T ss_pred             HeecCceeec---cCCCcccCChhhhhhh
Confidence            6555443221   2344667777766554

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.11  E-value=7.8e-11  Score=109.95  Aligned_cols=73  Identities=16%  Similarity=0.283  Sum_probs=47.6

Q ss_pred             eEEEEEeccCCc-cHHHH--HHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC---CcEEE
Q psy16752        149 THVCMVFEVLGH-NLLKL--IVKSKY--RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE---ARVKT  220 (284)
Q Consensus       149 ~~~~iv~e~~~~-~l~~~--~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~---~~v~l  220 (284)
                      ...++||||+.| .+.+.  +...+.  ..+.+..+..++.|++       .. |++|+|++|+||+++.++   +.+++
T Consensus       234 t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~-GffHaDpHPGNIlv~~~g~~~~~i~l  305 (537)
T PRK04750        234 SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------RD-GFFHADMHPGNIFVSYDPPENPRYIA  305 (537)
T ss_pred             CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hC-CeeeCCCChHHeEEecCCCCCCeEEE
Confidence            346799999955 55432  222110  0133444455555554       47 999999999999997653   38999


Q ss_pred             EeccchhHh
Q psy16752        221 LALNATELA  229 (284)
Q Consensus       221 ~Dfg~a~~~  229 (284)
                      +|||.+...
T Consensus       306 lDFGivg~l  314 (537)
T PRK04750        306 LDFGIVGSL  314 (537)
T ss_pred             EecceEEEC
Confidence            999986643

>KOG0606|consensus

Probab=99.07  E-value=1.4e-10  Score=112.12  Aligned_cols=136  Identities=15%  Similarity=0.303  Sum_probs=86.4

Q ss_pred             cceEEEEEecccCceeEEEecceeEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVF  155 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~  155 (284)
                      .+|..++.|..|++|.||+++++...--       |     .+ +++..++   ..+||..+-+.          .+.| 
T Consensus        83 ~df~~IklisngAygavylvrh~~trqr-------f-----a~-kiNkq~l---ilRnilt~a~n----------pfvv-  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQR-------F-----AM-KINKQNL---ILRNILTFAGN----------PFVV-  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccc-------h-----hh-cccccch---hhhccccccCC----------ccee-
Confidence            4699999999999999999987642100       0     00 1111110   01223332221          1122 


Q ss_pred             ccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCC--
Q psy16752        156 EVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGH--  233 (284)
Q Consensus       156 e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~--  233 (284)
                          |+-...+..-+  .++..        ++.+++|||+- ||+|||+||+|.+|+.- +++++.|||+++......  
T Consensus       136 ----gDc~tllk~~g--~lPvd--------mvla~Eylh~y-givhrdlkpdnllIT~m-GhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  136 ----GDCATLLKNIG--PLPVD--------MVLAVEYLHSY-GIVHRDLKPDNLLITSM-GHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             ----chhhhhcccCC--CCcch--------hhHHhHhhccC-CeecCCCCCCcceeeec-ccccccchhhhhhhhhhccc
Confidence                33333333222  23322        27889999999 99999999999999766 899999999987433221  


Q ss_pred             -------------CCCCcccCCCCccchhhhhhc
Q psy16752        234 -------------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       234 -------------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                                   ......||||.|+|||++.+.
T Consensus       200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrq  233 (1205)
T KOG0606|consen  200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQ  233 (1205)
T ss_pred             hhhhcchHHHHHHhhhccccCCccccChhhhhhh
Confidence                         112356999999999999765

>KOG0590|consensus

Probab=99.01  E-value=3.5e-11  Score=114.21  Aligned_cols=166  Identities=20%  Similarity=0.293  Sum_probs=118.7

Q ss_pred             ceEEEEEecccCceeEEEeccee------EEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKT------QVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~------~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .|.+.+.||.|+|+.|-++....      +.+.....      ......|..+-+.+.       .|.|++.+++...  
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s-------~h~n~~~~~~~~~--   91 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS-------KHSNTVHMIEPSS--   91 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc-------ccccccccCCccC--
Confidence            48888899999999998765511      11111111      111222444444443       1477888888665  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLH-TKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                        .....++++++. +++++..+.......++...+..++.|+..+|.|+| .. ++.||||||+|.+++.....+++.|
T Consensus        92 --~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s~~~l~~~d  168 (601)
T KOG0590|consen   92 --SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDESGSALKIAD  168 (601)
T ss_pred             --CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccCCCcccCCC
Confidence              788899999998 677777773222224778888999999999999999 87 9999999999999955522899999


Q ss_pred             ccchhHhhh-CC--CCCCcccC-CCCccchhhhhhc
Q psy16752        223 LNATELAAT-GH--KLPVSFCS-TAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~-~~--~~~~~~~g-t~~~~aPE~l~~~  254 (284)
                      ||+|..... ..  ......+| +++|+|||.+.++
T Consensus       169 f~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~  204 (601)
T KOG0590|consen  169 FGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGK  204 (601)
T ss_pred             chhhccccccCCcceeeecccCCCCCCCCcccccch
Confidence            999886655 22  22235678 9999999999886

>KOG1033|consensus

Probab=98.99  E-value=1.7e-10  Score=104.23  Aligned_cols=104  Identities=15%  Similarity=0.225  Sum_probs=80.9

Q ss_pred             eEEEEEeccC-CccHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSK-YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      .++||.|++| ..+|.+.+.+.. ....+...++.++.|++.|++|   + +.+|||+||.||+. .++..++|.|||+.
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~-~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFF-SDDDQLKIGDFGLV  403 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhcccccccc-ccchhhhhhhhhhe
Confidence            4689999999 556666665332 2346788899999999999999   8 99999999999999 55579999999987


Q ss_pred             hHhhhCC------CCCCcccCCCCccchhhhhhccch
Q psy16752        227 ELAATGH------KLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       227 ~~~~~~~------~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      .......      .......||..||+||.+.+....
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~  440 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYS  440 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhh
Confidence            6444332      123366899999999999865543

>KOG0195|consensus

Probab=98.95  E-value=2.9e-10  Score=95.07  Aligned_cols=159  Identities=13%  Similarity=0.182  Sum_probs=117.6

Q ss_pred             eEEEEEecccCceeEEEeccee---EE------EecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT---QV------LVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~---~~------~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ..++.+|.+...|+.|++++..   +.      .+.....+++..|...|+-+.|        |||+.++++..    ..
T Consensus       192 lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifsh--------pnilpvlgacn----sp  259 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSH--------PNILPVLGACN----SP  259 (448)
T ss_pred             hhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecC--------Cchhhhhhhcc----CC
Confidence            4566788889999999998843   11      1233446778888888888888        77999999876    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEec-CCCCCCeeEeeC-CCcEEEEeccc
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHT-DIKPENVLLCVD-EARVKTLALNA  225 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHr-DiKp~NIll~~~-~~~v~l~Dfg~  225 (284)
                      ..+.++..|+ -|+|+..+.....-.++..++.+++.+++.|+.|||+...++-| -|.+..++|+.+ ..++...|--+
T Consensus       260 pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kf  339 (448)
T KOG0195|consen  260 PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKF  339 (448)
T ss_pred             CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheeccccee
Confidence            8899999999 67888888766544578889999999999999999997555544 678888888555 23444444333


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +.       ......|.|.||+||.+.++-
T Consensus       340 sf-------qe~gr~y~pawmspealqrkp  362 (448)
T KOG0195|consen  340 SF-------QEVGRAYSPAWMSPEALQRKP  362 (448)
T ss_pred             ee-------eccccccCcccCCHHHHhcCc
Confidence            21       122457899999999998753

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.95  E-value=8.5e-09  Score=88.60  Aligned_cols=112  Identities=13%  Similarity=0.104  Sum_probs=80.2

Q ss_pred             hhHHHHHHHHhhhcCCCCCcccchhccccccceE-eccCCeEEEEEeccCCc--cHHHHHHhhCCCCCCHHHHHHHHHHH
Q psy16752        110 TALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI-CGVNGTHVCMVFEVLGH--NLLKLIVKSKYRGIPLENVRSIIRQI  186 (284)
Q Consensus       110 ~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~-~~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~~~~~~~~~i~~qi  186 (284)
                      .+.+|...+.++....+..|      ..+.+.+. .+.....-++|||++++  ++.+++........+......++.++
T Consensus        74 ~a~rE~~~l~~L~~~GIptP------~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~l  147 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTM------TGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRV  147 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCC------CeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHH
Confidence            47899999999987554333      22222211 11123457899999966  46666543222335677788999999


Q ss_pred             HHHHHHHhhCCCcEecCCCCCCeeEee------CCCcEEEEeccchhH
Q psy16752        187 LQGLNYLHTKCRIIHTDIKPENVLLCV------DEARVKTLALNATEL  228 (284)
Q Consensus       187 ~~aL~~LH~~~givHrDiKp~NIll~~------~~~~v~l~Dfg~a~~  228 (284)
                      +..+.-||.. ||+|+|+++.|||+..      +...+.++||+.+..
T Consensus       148 a~~i~~LH~~-Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        148 ATMVRDMHAA-GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHHHHHHC-cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            9999999999 9999999999999964      246899999998753

>KOG0601|consensus

Probab=98.93  E-value=2.5e-09  Score=98.11  Aligned_cols=174  Identities=18%  Similarity=0.195  Sum_probs=124.9

Q ss_pred             cceeccceEEEEEecc--cCceeEEEecc--ee-----EEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhc
Q psy16752         71 GMLFNNRYRVTRKLGW--GHFSTVWFTGS--KT-----QVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVV  135 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~--G~fg~Vy~a~~--~~-----~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~  135 (284)
                      -.++...+.+...+|.  |.+|.||.+..  +.     +++...      .....-.+|+...+.+..       |++.+
T Consensus       109 ~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~-------~~~~v  181 (524)
T KOG0601|consen  109 DSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDS-------HENPV  181 (524)
T ss_pred             cchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCc-------ccccc
Confidence            3455567888999999  99999998876  21     222211      111222334333333332       36677


Q ss_pred             cccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHH----HHHHHhhCCCcEecCCCCCCeeE
Q psy16752        136 QLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ----GLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       136 ~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~----aL~~LH~~~givHrDiKp~NIll  211 (284)
                      ..+..|+    +.+.+++-+|+++.++..+..... .-++...+...+.+...    ||.++|.. .++|-|+||.||++
T Consensus       182 ~~~~~~e----~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~~kp~~i~~  255 (524)
T KOG0601|consen  182 RDSPAWE----GSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDDLKPANIFT  255 (524)
T ss_pred             ccCcccc----cCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC-cccccccchhheec
Confidence            7777776    889999999999988887776543 23777778888888888    99999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchhHhhhCCCCCCcc-----cCCCCccchhhhhhccch
Q psy16752        212 CVDEARVKTLALNATELAATGHKLPVSF-----CSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~~~~~~~~~~~~~-----~gt~~~~aPE~l~~~~~~  257 (284)
                      ..+...+++.|||+......+.......     .|-.-|++||.+.+-...
T Consensus       256 ~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~  306 (524)
T KOG0601|consen  256 TSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF  306 (524)
T ss_pred             ccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch
Confidence            6665899999999887666654322222     677889999998876554

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.89  E-value=1.2e-08  Score=84.91  Aligned_cols=139  Identities=19%  Similarity=0.221  Sum_probs=86.8

Q ss_pred             EEecccCceeEEEecc----eeEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         82 RKLGWGHFSTVWFTGS----KTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~----~~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      +.|+.|..+.||++..    ...++....     ....+..|..+++.+.+..+      .+..++..... .......+
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~------~vp~~~~~~~~-~~~~~~~~   76 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGV------PVPKVLALCED-PSVLGTPF   76 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCC------CCCCEEEECCC-CCccCCce
Confidence            5788999999998763    234454332     24567899999999987421      13333333220 00113568


Q ss_pred             EEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhC------------------------------------
Q psy16752        153 MVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTK------------------------------------  196 (284)
Q Consensus       153 iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~------------------------------------  196 (284)
                      +||||+.|..+......  ..++..+...++.+++.+|..||+.                                    
T Consensus        77 ~v~e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (223)
T cd05154          77 YVMERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP  154 (223)
T ss_pred             EEEEEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence            99999955433222111  1255556666666666666666631                                    


Q ss_pred             -------------------CCcEecCCCCCCeeEeeC-CCcEEEEeccchhHh
Q psy16752        197 -------------------CRIIHTDIKPENVLLCVD-EARVKTLALNATELA  229 (284)
Q Consensus       197 -------------------~givHrDiKp~NIll~~~-~~~v~l~Dfg~a~~~  229 (284)
                                         ..+||+|+.|.||+++.+ .+.+.++||+.+...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g  207 (223)
T cd05154         155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG  207 (223)
T ss_pred             HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence                               157999999999999663 466899999987643

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.81  E-value=3.7e-09  Score=85.95  Aligned_cols=99  Identities=23%  Similarity=0.316  Sum_probs=64.5

Q ss_pred             hhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCC--ccHHHHHHhhCCCCCCHHHHHHHHHHH
Q psy16752        109 ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLG--HNLLKLIVKSKYRGIPLENVRSIIRQI  186 (284)
Q Consensus       109 ~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~~~~~~~~~i~~qi  186 (284)
                      ....+|.+.|.++....+.      ++..+..        ..-+|||||++  |..+..+....   ++......++.++
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~------vP~p~~~--------~~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~i  115 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVP------VPKPYDY--------NRNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEI  115 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-S------S--EEEE--------ETTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcc------CCcEEEE--------eCCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHH
Confidence            4467899999998875422      3333321        12369999997  76665555433   2345567788888


Q ss_pred             HHHHHH-HhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        187 LQGLNY-LHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       187 ~~aL~~-LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      +..+.. +|.. ||||+||.+.|||+..  +.+.++|||.+.
T Consensus       116 l~~~~~~~~~~-givHGDLs~~NIlv~~--~~~~iIDf~qav  154 (188)
T PF01163_consen  116 LEEIIKMLHKA-GIVHGDLSEYNILVDD--GKVYIIDFGQAV  154 (188)
T ss_dssp             HHHHHHHHHCT-TEEESS-STTSEEEET--TCEEE--GTTEE
T ss_pred             HHHHHHHHHhc-CceecCCChhhEEeec--ceEEEEecCcce
Confidence            886665 5687 9999999999999944  399999999764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.79  E-value=5.1e-08  Score=80.76  Aligned_cols=114  Identities=20%  Similarity=0.281  Sum_probs=81.9

Q ss_pred             CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCCc--cHHHHHHhhCCCCCCHHHHHHHHH
Q psy16752        107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH--NLLKLIVKSKYRGIPLENVRSIIR  184 (284)
Q Consensus       107 ~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~--~l~~~~~~~~~~~~~~~~~~~i~~  184 (284)
                      ....+.+|...+..+....+..|      ..+.+.+.........++|+|++.+  +|.+.+....  ..+......++.
T Consensus        54 ~~~ra~~E~~~~~~L~~~Gi~tP------~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~  125 (206)
T PF06293_consen   54 RRSRAKREWRNLQRLREAGIPTP------EPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLR  125 (206)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCC------cEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHH
Confidence            35568889999999887554433      2222222111122567899999955  4555555432  156777888999


Q ss_pred             HHHHHHHHHhhCCCcEecCCCCCCeeEeeCC--CcEEEEeccchhHh
Q psy16752        185 QILQGLNYLHTKCRIIHTDIKPENVLLCVDE--ARVKTLALNATELA  229 (284)
Q Consensus       185 qi~~aL~~LH~~~givHrDiKp~NIll~~~~--~~v~l~Dfg~a~~~  229 (284)
                      +++..+.-||.. ||+|+|++|.|||+..++  ..+.++||+.+...
T Consensus       126 ~l~~~i~~lH~~-gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  126 ALARLIAKLHDA-GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHHHHHHHHHC-cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            999999999999 999999999999996653  38999999987643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.70  E-value=6.3e-07  Score=73.68  Aligned_cols=118  Identities=11%  Similarity=0.063  Sum_probs=83.9

Q ss_pred             CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCC--ccHHHHHHhhCCCCCCHHHHHHHH
Q psy16752        106 QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLG--HNLLKLIVKSKYRGIPLENVRSII  183 (284)
Q Consensus       106 ~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~~~~~~~~~i~  183 (284)
                      .-...+.+|+..+..+....+.      +++....-....+....-+||+|-++  -+|.+.+....-.+.+...-..++
T Consensus        61 ~g~ptf~rE~~~L~~L~~~GvP------VP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il  134 (216)
T PRK09902         61 FGRPTIVREVAVIKELERAGVI------VPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAML  134 (216)
T ss_pred             CCchHHHHHHHHHHHHHHcCCC------CCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHH
Confidence            3457789999999999886543      22222111112334566889999886  466666544332345777778899


Q ss_pred             HHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC-CcEEEEeccchhHhh
Q psy16752        184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVDE-ARVKTLALNATELAA  230 (284)
Q Consensus       184 ~qi~~aL~~LH~~~givHrDiKp~NIll~~~~-~~v~l~Dfg~a~~~~  230 (284)
                      .+++..|.-||.. |+.|+|+-+.||+++.++ ..+.++||.-++...
T Consensus       135 ~~va~~ia~LH~~-Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l  181 (216)
T PRK09902        135 KAVALAFKKMHSV-NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRL  181 (216)
T ss_pred             HHHHHHHHHHHHC-CCcCCCCCHhheeecCCCCeeEEEEEhhccchhh
Confidence            9999999999999 999999999999996442 259999998766433

>KOG1023|consensus

Probab=98.48  E-value=1.5e-07  Score=86.43  Aligned_cols=121  Identities=18%  Similarity=0.234  Sum_probs=91.3

Q ss_pred             chhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCc-EecCCCCCCe
Q psy16752        132 ERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRI-IHTDIKPENV  209 (284)
Q Consensus       132 ~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~gi-vHrDiKp~NI  209 (284)
                      .|+.++++...    .+...++|.+|+ .|+|.+.+.... ..+++-=...++++|+.||.|||.- .| .|+.+++.|.
T Consensus         7 ~n~~~f~g~~~----~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s-~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    7 DNLNKFIGASV----DGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNS-PIGYHGALKSSNC   80 (484)
T ss_pred             hhhhhheeeEe----cCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcC-cceeeeeeccccc
Confidence            67888888765    668899999999 677777776643 3477888888999999999999998 65 8999999999


Q ss_pred             eEeeCCCcEEEEeccchhHhhhCC--CCCCcccCCCCccchhhhhhccchhh
Q psy16752        210 LLCVDEARVKTLALNATELAATGH--KLPVSFCSTAPVQEYSELSRRMSKNK  259 (284)
Q Consensus       210 ll~~~~~~v~l~Dfg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~~~~~~  259 (284)
                      +++.. ..+++.|||+........  .......-..-|.|||.+.+......
T Consensus        81 lvd~~-w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~  131 (484)
T KOG1023|consen   81 LVDSR-WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSL  131 (484)
T ss_pred             eeeee-EEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccc
Confidence            99554 899999999977664311  11112223445888999887655443

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.48  E-value=6.5e-07  Score=75.65  Aligned_cols=145  Identities=19%  Similarity=0.196  Sum_probs=95.1

Q ss_pred             eEEEEEecccCceeEEEecce----eEEEec--------------------------CCCChhhHHHHHHHHhhhcCCCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK----TQVLVS--------------------------PQFPETALDEIKLLKCVRDGDVN  127 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~----~~~~~~--------------------------~~~~~~~~~E~~~l~~l~~~~~~  127 (284)
                      +.+...||-|--+.||.|.+.    .++|.-                          ......+.+|..+|.+|..... 
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~-  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV-  171 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC-
Confidence            466789999999999999762    233320                          0012346778888888876311 


Q ss_pred             CcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       128 ~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                           .++..+        ..+..++|||++.|-.+..+.      ++...+..++..|++-+.-+-.. |+||+|+.+=
T Consensus       172 -----~VP~P~--------~~nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~-GiVHGDlSef  231 (304)
T COG0478         172 -----KVPKPI--------AWNRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRR-GIVHGDLSEF  231 (304)
T ss_pred             -----CCCCcc--------ccccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHc-CccccCCchh
Confidence                 233333        345678999999775443321      23444555666666666655566 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhccch
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      ||+++.| +.+.++||-.+.             .+...-|+|.+.+.+..
T Consensus       232 NIlV~~d-g~~~vIDwPQ~v-------------~~~hp~a~e~l~RDv~n  267 (304)
T COG0478         232 NILVTED-GDIVVIDWPQAV-------------PISHPDAEELLERDVEN  267 (304)
T ss_pred             eEEEecC-CCEEEEeCcccc-------------cCCCCCHHHHHHhHHHH
Confidence            9999655 899999997642             23334567777776654

>KOG1243|consensus

Probab=98.44  E-value=1.8e-06  Score=80.74  Aligned_cols=103  Identities=23%  Similarity=0.330  Sum_probs=81.1

Q ss_pred             hhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHH
Q psy16752        109 ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ  188 (284)
Q Consensus       109 ~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~  188 (284)
                      ....+-+..|+.++|        |+|++++..++    ....+|||+|-+.. +-..+..     +....++.-+.||+.
T Consensus        54 ~~~~~A~k~lKtlRH--------P~Il~yL~t~e----~~~~~ylvTErV~P-l~~~lk~-----l~~~~v~~Gl~qIl~  115 (690)
T KOG1243|consen   54 ELAKRAVKRLKTLRH--------PNILSYLDTTE----EEGTLYLVTERVRP-LETVLKE-----LGKEEVCLGLFQILA  115 (690)
T ss_pred             HHHHHHHHHhhhccC--------chhhhhhhhhc----ccCceEEEeecccc-HHHHHHH-----hHHHHHHHHHHHHHH
Confidence            345666778888998        77999999887    67799999998832 2233332     235667777899999


Q ss_pred             HHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        189 GLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       189 aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      ||.|||..|+++|++|.-..|+|+.. +..+|.+|.++....
T Consensus       116 AL~FL~~d~~lvHgNv~~~SVfVn~~-GeWkLggle~v~~~~  156 (690)
T KOG1243|consen  116 ALSFLNDDCNLVHGNVCKDSVFVNES-GEWKLGGLELVSKAS  156 (690)
T ss_pred             HHHHHhccCCeeeccEeeeeEEEcCC-CcEEEeeeEEEeccc
Confidence            99999977799999999999999655 899999999875443

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.39  E-value=4.7e-06  Score=68.87  Aligned_cols=139  Identities=12%  Similarity=0.127  Sum_probs=80.3

Q ss_pred             ceeccceEEEEEecccCceeEEEecce---eEEEecCCC-------------ChhhHHHHHHHHhhhcCCCCCcccchhc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF-------------PETALDEIKLLKCVRDGDVNDPYRERVV  135 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~-------------~~~~~~E~~~l~~l~~~~~~~~~~~~i~  135 (284)
                      .++.++|.+.+.+-.....-|.+....   ..++.....             .....+++..+.++....+..     ..
T Consensus        27 ~i~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~-----~~  101 (229)
T PF06176_consen   27 KILDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTE-----PA  101 (229)
T ss_pred             HHHhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccc-----cc
Confidence            455678999888888777777665442   233332111             111233344444443322111     22


Q ss_pred             cccccceEec-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        136 QLLDDFKICG-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       136 ~l~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      .++.+.+... .-....+++|||+.|--+..+..     +++    .+...|..++.-||.. |++|+|..|.|++++ +
T Consensus       102 ~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~-G~~HGD~hpgNFlv~-~  170 (229)
T PF06176_consen  102 DPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKH-GFYHGDPHPGNFLVS-N  170 (229)
T ss_pred             cceeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHc-CCccCCCCcCcEEEE-C
Confidence            2222222111 12345678999996643322211     332    2445677789999999 999999999999995 3


Q ss_pred             CCcEEEEeccchh
Q psy16752        215 EARVKTLALNATE  227 (284)
Q Consensus       215 ~~~v~l~Dfg~a~  227 (284)
                       +.++++||+..+
T Consensus       171 -~~i~iID~~~k~  182 (229)
T PF06176_consen  171 -NGIRIIDTQGKR  182 (229)
T ss_pred             -CcEEEEECcccc
Confidence             459999998765

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0601|consensus

Probab=98.39  E-value=2.7e-07  Score=84.95  Aligned_cols=139  Identities=20%  Similarity=0.221  Sum_probs=96.3

Q ss_pred             ccceEEEEEecccCceeEEEeccee---EEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT---QVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~---~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|..+..||.|.|+.|+.+..+.   .+...+.         .....+.|+.+...+..       |.+++.++..|.
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~-------~~~~~g~~~~W~  336 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGS-------HLPSVGKNSSWS  336 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhc-------ccccCCCCCCcc
Confidence            4568999999999999998765320   1111111         11223445555555443       244555555554


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          .-...||-.||+ ++++.....-.  ..+++...+.+..|++.++.++|+. .++|+|++|+||++..+++..++.
T Consensus       337 ----~~r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~~~~~~~~~  409 (524)
T KOG0601|consen  337 ----QLRQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISNDGFFSKLG  409 (524)
T ss_pred             ----ccccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccch-hhhcccccccceeeccchhhhhcc
Confidence                556667889999 55554444221  2378888999999999999999999 999999999999997766888899


Q ss_pred             eccchh
Q psy16752        222 ALNATE  227 (284)
Q Consensus       222 Dfg~a~  227 (284)
                      ||+...
T Consensus       410 ~~~~~t  415 (524)
T KOG0601|consen  410 DFGCWT  415 (524)
T ss_pred             cccccc
Confidence            998765

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.28  E-value=1e-05  Score=67.59  Aligned_cols=75  Identities=13%  Similarity=0.074  Sum_probs=47.4

Q ss_pred             EEEecccCceeEEEecc---eeEEEecCCC--ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEe
Q psy16752         81 TRKLGWGHFSTVWFTGS---KTQVLVSPQF--PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVF  155 (284)
Q Consensus        81 ~~~LG~G~fg~Vy~a~~---~~~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~  155 (284)
                      ++.|+.|..+.||++..   +..++.....  ...+..|..+++.+....+      .+..++... .........+++|
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~------pvP~~~~~~-~~~~~~~~~~~~~   74 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGI------PVPRVLAFD-TSDEFNGFPYLLM   74 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTS------BS--EEEEE-EETEETSEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCC------CCceEEeec-ccccccccceEEE
Confidence            46889999999999876   4455554333  4567889999999887442      123333311 1222344589999


Q ss_pred             ccCCccH
Q psy16752        156 EVLGHNL  162 (284)
Q Consensus       156 e~~~~~l  162 (284)
                      +++.|..
T Consensus        75 ~~i~g~~   81 (239)
T PF01636_consen   75 EYIPGRP   81 (239)
T ss_dssp             EEESSEE
T ss_pred             EEecccc
Confidence            9996543

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.24  E-value=2.1e-05  Score=66.06  Aligned_cols=70  Identities=14%  Similarity=0.124  Sum_probs=43.6

Q ss_pred             EEecccCceeEEEecc-eeEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccC
Q psy16752         82 RKLGWGHFSTVWFTGS-KTQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL  158 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~-~~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~  158 (284)
                      .+||+|..+.||+... +..++....  ......+|.++++.+....+.      +...+....    ......+||+++
T Consensus         7 ~~i~~G~t~~~y~~~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glp------vP~~~~~~~----~~~~~glv~e~i   76 (226)
T TIGR02172         7 TQTGEGGNGESYTHKTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIP------TPHPFDLVE----DGGRLGLIYELI   76 (226)
T ss_pred             eeecCCCCcceeEecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCC------CCceEEEEe----cCCeeeeeeeec
Confidence            5789999999998533 334444332  235678899999998764322      222232221    444567899999


Q ss_pred             Ccc
Q psy16752        159 GHN  161 (284)
Q Consensus       159 ~~~  161 (284)
                      .|.
T Consensus        77 ~G~   79 (226)
T TIGR02172        77 VGK   79 (226)
T ss_pred             CCc
Confidence            663

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.11  E-value=3.1e-05  Score=64.95  Aligned_cols=77  Identities=16%  Similarity=0.279  Sum_probs=55.0

Q ss_pred             EEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       150 ~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      .-.+||||+|....-.- +...-++...++..+..+++..+.-|-..+++||+||..=|||+.  .+.+.++||+.|-..
T Consensus       140 ~nVLvMEfIg~~g~pAP-~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~--~~~p~iID~~QaV~~  216 (268)
T COG1718         140 NNVLVMEFIGDDGLPAP-RLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH--DGEPYIIDVSQAVTI  216 (268)
T ss_pred             CCeEEEEeccCCCCCCC-CcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE--CCeEEEEECcccccc
Confidence            35799999965411000 001112344478889999999999887733999999999999995  479999999986533

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.96  E-value=1.9e-05  Score=73.77  Aligned_cols=78  Identities=18%  Similarity=0.222  Sum_probs=50.2

Q ss_pred             CeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        148 GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       148 ~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...-.++|||+.|--...+......+++...+...+.+++----+  .. |+.|.|..|.||++..+ +.+.+.|||...
T Consensus       238 t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~--~d-gffHaDpHpGNi~v~~~-g~i~~lDfGi~g  313 (517)
T COG0661         238 TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLL--RD-GFFHADPHPGNILVRSD-GRIVLLDFGIVG  313 (517)
T ss_pred             cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHH--hc-CccccCCCccceEEecC-CcEEEEcCccee
Confidence            345679999997744444432222346655444333333222222  25 99999999999999665 899999999865


Q ss_pred             Hh
Q psy16752        228 LA  229 (284)
Q Consensus       228 ~~  229 (284)
                      ..
T Consensus       314 ~l  315 (517)
T COG0661         314 RL  315 (517)
T ss_pred             cC
Confidence            33

>KOG1266|consensus

Probab=97.95  E-value=5.7e-06  Score=71.52  Aligned_cols=89  Identities=18%  Similarity=0.279  Sum_probs=69.0

Q ss_pred             chhccccccceEecc-CCeEEEEEeccC-CccHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhCC-CcEecCCCC
Q psy16752        132 ERVVQLLDDFKICGV-NGTHVCMVFEVL-GHNLLKLIVKSKY--RGIPLENVRSIIRQILQGLNYLHTKC-RIIHTDIKP  206 (284)
Q Consensus       132 ~~i~~l~~~~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~-givHrDiKp  206 (284)
                      .|+++++.+|...-. +.....+++||+ .|++.+++.+..+  ..+.....++|+.||+.||.|||+-. .|+|+++..
T Consensus       127 snlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc  206 (458)
T KOG1266|consen  127 SNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTC  206 (458)
T ss_pred             HHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcch
Confidence            568888777653222 455688899999 7888888876532  34888999999999999999999854 699999999


Q ss_pred             CCeeEeeCCCcEEEE
Q psy16752        207 ENVLLCVDEARVKTL  221 (284)
Q Consensus       207 ~NIll~~~~~~v~l~  221 (284)
                      +-|++. .++-+++.
T Consensus       207 ~tifiq-~ngLIkig  220 (458)
T KOG1266|consen  207 DTIFIQ-HNGLIKIG  220 (458)
T ss_pred             hheeec-CCceEEec
Confidence            999996 43555554

>KOG3741|consensus

Probab=97.86  E-value=6.6e-05  Score=68.76  Aligned_cols=110  Identities=15%  Similarity=0.207  Sum_probs=84.2

Q ss_pred             hHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccC--CccHHHHHHhhC-------------CCCCC
Q psy16752        111 ALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL--GHNLLKLIVKSK-------------YRGIP  175 (284)
Q Consensus       111 ~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~--~~~l~~~~~~~~-------------~~~~~  175 (284)
                      ...-++.|+++.|        .|++++.+.|.-..-...-+++|++|+  .++|.++.....             +...+
T Consensus       320 ~t~lve~wkkl~h--------~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~  391 (655)
T KOG3741|consen  320 DTSLVEAWKKLCH--------TNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAP  391 (655)
T ss_pred             chHHHHHHHHhcc--------CceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCch
Confidence            3445778999998        668988888763223566799999999  457777665322             12367


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       176 ~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      +..+..|+.||..||.++|+. |+.-+-|.|.+||++.+ .+++|...|..-...
T Consensus       392 e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~-~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  392 EEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGK-MRIRISGCGIMDVLQ  444 (655)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCc-ceEEEecccceeeec
Confidence            889999999999999999999 99999999999999554 488888777654443

>KOG1235|consensus

Probab=97.82  E-value=3.7e-05  Score=71.74  Aligned_cols=76  Identities=17%  Similarity=0.225  Sum_probs=53.2

Q ss_pred             CeEEEEEeccCCc---cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC---CCcEEEE
Q psy16752        148 GTHVCMVFEVLGH---NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD---EARVKTL  221 (284)
Q Consensus       148 ~~~~~iv~e~~~~---~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~---~~~v~l~  221 (284)
                      ...-.++|||+.|   +..+.+.+.+   ++...+...+.+...-.-+  .. |++|.|-.|.||++.++   ...+.+.
T Consensus       274 st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~~qIf--~~-GffHaDPHPGNilv~~~~~~~~~ivll  347 (538)
T KOG1235|consen  274 STKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYLEQIF--KT-GFFHADPHPGNILVRPNPEGDEEIVLL  347 (538)
T ss_pred             CcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHHHHHH--hc-CCccCCCCCCcEEEecCCCCCccEEEE
Confidence            3456899999965   4445555544   7777665555554333333  34 89999999999999743   5799999


Q ss_pred             eccchhHh
Q psy16752        222 ALNATELA  229 (284)
Q Consensus       222 Dfg~a~~~  229 (284)
                      |||+....
T Consensus       348 DhGl~~~i  355 (538)
T KOG1235|consen  348 DHGLYAVI  355 (538)
T ss_pred             cccccccc
Confidence            99986643

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.81  E-value=0.00076  Score=55.37  Aligned_cols=127  Identities=13%  Similarity=0.187  Sum_probs=82.9

Q ss_pred             EEecccCceeEEEecc--eeEEEecCCC--------------------ChhhHHHHHHHHhhh-cCCCCCcccchhcccc
Q psy16752         82 RKLGWGHFSTVWFTGS--KTQVLVSPQF--------------------PETALDEIKLLKCVR-DGDVNDPYRERVVQLL  138 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~--~~~~~~~~~~--------------------~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~  138 (284)
                      ..||+|+.=.||.--+  ...+|+....                    .....+|+..+..+. ......   .+|..++
T Consensus         7 ~~i~~G~~R~cy~HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~---~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQHPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDW---SHIPRFY   83 (199)
T ss_pred             cccccCCCceEEECCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcc---cccccEe
Confidence            4789999999997544  2344443332                    366778888888887 433322   4578888


Q ss_pred             ccceEeccCCeEEEEEeccC---Cc----cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        139 DDFKICGVNGTHVCMVFEVL---GH----NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~---~~----~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      ++.+    +....-+|+|.+   .|    +|.+++...   .++. .+...+.+   -..||-.. .|+.+|++|.||++
T Consensus        84 G~ve----T~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~L~~---f~~~l~~~-~Iv~~dl~~~NIv~  151 (199)
T PF10707_consen   84 GFVE----TNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQALDE---FKRYLLDH-HIVIRDLNPHNIVV  151 (199)
T ss_pred             EEEe----cCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHHHHH---HHHHHHHc-CCeecCCCcccEEE
Confidence            8877    677778888866   22    555555333   2555 43333333   35577777 89999999999999


Q ss_pred             eeCC--C-cEEEEec
Q psy16752        212 CVDE--A-RVKTLAL  223 (284)
Q Consensus       212 ~~~~--~-~v~l~Df  223 (284)
                      ....  . .+.++|-
T Consensus       152 ~~~~~~~~~lvlIDG  166 (199)
T PF10707_consen  152 QRRDSGEFRLVLIDG  166 (199)
T ss_pred             EecCCCceEEEEEeC
Confidence            7553  2 5666664

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.74  E-value=0.00029  Score=59.46  Aligned_cols=32  Identities=19%  Similarity=0.314  Sum_probs=25.4

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      ++||+|+.|.|||++ ++....++||+.+....
T Consensus       165 ~l~HGD~~~~Nvlv~-~~~i~giIDw~~a~~gD  196 (235)
T cd05155         165 VWFHGDLAPGNLLVQ-DGRLSAVIDFGCLGVGD  196 (235)
T ss_pred             eEEeCCCCCCcEEEE-CCCEEEEEeCcccCcCC
Confidence            599999999999995 43455799999876443

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.73  E-value=0.00026  Score=59.92  Aligned_cols=31  Identities=16%  Similarity=0.109  Sum_probs=25.5

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      .++|+|+.|.|||++. +..+.|+||+.+...
T Consensus       164 ~l~HgD~~~~Nil~~~-~~~~~iIDwe~a~~g  194 (244)
T cd05150         164 VVTHGDACLPNIIVDP-GKFSGFIDLGRLGVA  194 (244)
T ss_pred             EEECCCCCCccEEEeC-CcEEEEEEccccccc
Confidence            5999999999999955 356789999987633

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.73  E-value=0.00013  Score=58.19  Aligned_cols=126  Identities=18%  Similarity=0.183  Sum_probs=79.1

Q ss_pred             EEEEEecccCceeEEEeccee---EEEe--cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEE
Q psy16752         79 RVTRKLGWGHFSTVWFTGSKT---QVLV--SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCM  153 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~~~---~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~i  153 (284)
                      ++.+.|+.|.+|.||++.++.   ++++  .......+..|.++|..+.....       -.++|.        -+..++
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~-------~p~vy~--------yg~~~i   89 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGV-------TPEVYF--------YGEDFI   89 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCC-------CceEEE--------echhhh
Confidence            556789999999999998863   3333  33445678899999998876321       122222        223456


Q ss_pred             EeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCC-CCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        154 VFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK-PENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       154 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiK-p~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      .|||+.| .|.+....     .+...+    ..++++---|-.. ||-|..|. |..++|..+ +.+.|+||..|.+-.
T Consensus        90 ~me~i~G~~L~~~~~~-----~~rk~l----~~vlE~a~~LD~~-GI~H~El~~~~k~vlv~~-~~~~iIDFd~At~k~  157 (201)
T COG2112          90 RMEYIDGRPLGKLEIG-----GDRKHL----LRVLEKAYKLDRL-GIEHGELSRPWKNVLVND-RDVYIIDFDSATFKK  157 (201)
T ss_pred             hhhhhcCcchhhhhhc-----ccHHHH----HHHHHHHHHHHHh-ccchhhhcCCceeEEecC-CcEEEEEccchhhcc
Confidence            6999966 54443321     122333    3344443345555 99999885 555555344 599999999987443

>PLN02876 acyl-CoA dehydrogenase

Probab=97.70  E-value=0.00029  Score=70.19  Aligned_cols=31  Identities=23%  Similarity=0.395  Sum_probs=25.0

Q ss_pred             CcEecCCCCCCeeEeeCCC-cEEEEeccchhH
Q psy16752        198 RIIHTDIKPENVLLCVDEA-RVKTLALNATEL  228 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~-~v~l~Dfg~a~~  228 (284)
                      .+||+|+++.|||+++++. .+-++||.++..
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             ceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            4999999999999975433 468999998663

>KOG2270|consensus

Probab=97.62  E-value=0.00033  Score=62.13  Aligned_cols=132  Identities=17%  Similarity=0.304  Sum_probs=90.6

Q ss_pred             EEEEEecccCceeEEEecc----eeEEEecC-------------------------CCChh-----hHHHHHHHHhhhcC
Q psy16752         79 RVTRKLGWGHFSTVWFTGS----KTQVLVSP-------------------------QFPET-----ALDEIKLLKCVRDG  124 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~----~~~~~~~~-------------------------~~~~~-----~~~E~~~l~~l~~~  124 (284)
                      .|-..|..|--+.||.|..    ..++++.+                         ..+..     +..|++-|+++..+
T Consensus       147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            3456788899999998865    12333311                         01111     35688888888876


Q ss_pred             CCCCcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCC
Q psy16752        125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI  204 (284)
Q Consensus       125 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDi  204 (284)
                      .+.+|- |.++             ....|||+|+|..-+-.-.... -.++...+..+..|++.-+.-|-+.|++||.||
T Consensus       227 GIP~Pe-PIlL-------------k~hVLVM~FlGrdgw~aPkLKd-~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADL  291 (520)
T KOG2270|consen  227 GIPCPE-PILL-------------KNHVLVMEFLGRDGWAAPKLKD-ASLSTSKARELYQQCVRIMRRLYQKCRLVHADL  291 (520)
T ss_pred             CCCCCC-ceee-------------ecceEeeeeccCCCCcCccccc-ccCChHHHHHHHHHHHHHHHHHHHHhceeccch
Confidence            655553 2111             1246999999754443222221 237888899999999999998888889999999


Q ss_pred             CCCCeeEeeCCCcEEEEeccchh
Q psy16752        205 KPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       205 Kp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .-=|+|+ .+ +.+.++|.+-+-
T Consensus       292 SEfN~Ly-hd-G~lyiIDVSQSV  312 (520)
T KOG2270|consen  292 SEFNLLY-HD-GKLYIIDVSQSV  312 (520)
T ss_pred             hhhhheE-EC-CEEEEEEccccc
Confidence            9999999 44 899999998654

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.50  E-value=0.0048  Score=50.58  Aligned_cols=125  Identities=16%  Similarity=0.218  Sum_probs=83.2

Q ss_pred             cceEEEEEecccCc-eeEEEecce---eEEEec---------------C----------CCChhhHHHHHHHHhhhcCCC
Q psy16752         76 NRYRVTRKLGWGHF-STVWFTGSK---TQVLVS---------------P----------QFPETALDEIKLLKCVRDGDV  126 (284)
Q Consensus        76 ~~y~i~~~LG~G~f-g~Vy~a~~~---~~~~~~---------------~----------~~~~~~~~E~~~l~~l~~~~~  126 (284)
                      .+++.++.||.|.. |.||++...   +++|+.               .          .....+..|++...+|...+-
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            46999999999999 999998763   344440               0          123456789999988887541


Q ss_pred             CCcccchh--ccccccceEec--------------cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q psy16752        127 NDPYRERV--VQLLDDFKICG--------------VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGL  190 (284)
Q Consensus       127 ~~~~~~~i--~~l~~~~~~~~--------------~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  190 (284)
                           .++  +++++++....              .......||.||....-          .+....    +.+|+.-|
T Consensus       117 -----e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~----~~~~~~dl  177 (207)
T PF13095_consen  117 -----EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRD----IPQMLRDL  177 (207)
T ss_pred             -----cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhH----HHHHHHHH
Confidence                 233  56666553221              12233457777764322          133333    45677778


Q ss_pred             HHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        191 NYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       191 ~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ..+|.. ||+-+|+++.|..      .-+|+|||.+
T Consensus       178 ~~~~k~-gI~~~Dv~~~ny~------~G~lvDfs~~  206 (207)
T PF13095_consen  178 KILHKL-GIVPRDVKPRNYR------GGKLVDFSSS  206 (207)
T ss_pred             HHHHHC-CeeeccCcccccc------CCEEEecccC
Confidence            899999 9999999999974      3578999864

>PRK10593 hypothetical protein; Provisional

Probab=97.32  E-value=0.0038  Score=54.69  Aligned_cols=77  Identities=12%  Similarity=0.101  Sum_probs=48.6

Q ss_pred             eEEEEEecccCceeEEEecc---eeEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS---KTQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~---~~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      -.-.+.||.|..+.||....   +..+|..+.  ....+..|...++.+.....     ..++++++.... +...+..+
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~-----vpVP~V~~~~~~-~~~~g~~~   89 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGT-----VRMPTVYGVMTH-EQSPGPDV   89 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCC-----CCcCcEEEEecc-CCcCCCeE
Confidence            34467899999999998654   334455443  24588999999999875320     123444432220 11235589


Q ss_pred             EEeccCCc
Q psy16752        153 MVFEVLGH  160 (284)
Q Consensus       153 iv~e~~~~  160 (284)
                      ||||++.|
T Consensus        90 LVmE~i~G   97 (297)
T PRK10593         90 LLLERLRG   97 (297)
T ss_pred             EEEeccCC
Confidence            99999854

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.22  E-value=0.0031  Score=56.89  Aligned_cols=102  Identities=10%  Similarity=0.195  Sum_probs=73.9

Q ss_pred             CeEEEEEeccCCc--cHHHHHH----hhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        148 GTHVCMVFEVLGH--NLLKLIV----KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       148 ~~~~~iv~e~~~~--~l~~~~~----~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      +..+-++|+.+.|  ....++.    ++....+.+.-+++.++.|+.+...||.. |-+-+|+.++|+|+ .|+..|.++
T Consensus        82 ~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~-Gh~vGDVn~~~~lV-sd~~~V~LV  159 (637)
T COG4248          82 GKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH-GHVVGDVNQNSFLV-SDDSKVVLV  159 (637)
T ss_pred             cceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc-CCcccccCccceee-ecCceEEEE
Confidence            3347788998844  2222221    12223478899999999999999999999 99999999999999 566889999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |-...... .+.......+|.+.|..||..+
T Consensus       160 dsDsfqi~-~ng~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         160 DSDSFQIN-ANGTLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             cccceeec-cCCceEecccCccccCCHHHhc
Confidence            87655444 3333444567888888888765

>KOG0606|consensus

Probab=97.13  E-value=0.0001  Score=72.54  Aligned_cols=138  Identities=19%  Similarity=0.216  Sum_probs=87.5

Q ss_pred             ceEEEEEecccCceeEEEecceeEEEecCCCChhhHHHHHH-----HHhhh-cCCC-CCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKL-----LKCVR-DGDV-NDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~~~~E~~~-----l~~l~-~~~~-~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .+.+.+-+-+|+++.++.+.....--   ............     ++.++ ..++ .++.+|-++.....    .+...
T Consensus       805 ~~~i~~p~qS~sp~ss~p~~pa~sgh---~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s----~~~rs  877 (1205)
T KOG0606|consen  805 GFEITKPSQSGSPSSSFPASPAGSGH---TRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS----FPCRS  877 (1205)
T ss_pred             cceecccccCCCCcccccCCcccccc---ccchhhhccchhhccccccccCCccCccccCCCCceecccCC----CCCCC
Confidence            37777788899999998775432110   000000001111     11111 1111 11333444444333    23778


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ..++||+|+ ++++...+....  +.+..-++.+...+..++++||.. .++|||++|.|+++.. .++..+.||+.
T Consensus       878 P~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~-~gh~~l~~~~t  950 (1205)
T KOG0606|consen  878 PLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAY-DGHRPLTDFGT  950 (1205)
T ss_pred             CcchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc-hhhcccccccchhhcc-cCCcccCcccc
Confidence            899999999 566666665443  467777888889999999999998 7999999999999944 48899999973

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.92  E-value=0.0036  Score=51.00  Aligned_cols=100  Identities=24%  Similarity=0.293  Sum_probs=70.7

Q ss_pred             HHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCC-ccHHHH---HHhhCCCCCCHHHHHHHHHHHHH
Q psy16752        113 DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLG-HNLLKL---IVKSKYRGIPLENVRSIIRQILQ  188 (284)
Q Consensus       113 ~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~-~~l~~~---~~~~~~~~~~~~~~~~i~~qi~~  188 (284)
                      .|.-++..+.+.       ++++++++...        .++|.||.+ ++++..   +..-  ...++.....++.+++.
T Consensus         8 ~E~lll~~l~~~-------~~~pk~lG~CG--------~~~v~E~~~~~~~~~~~~~l~~~--~~~~w~~R~~iA~~lL~   70 (188)
T PF12260_consen    8 NEPLLLQLLQGS-------EPFPKLLGSCG--------RFYVVEYVGAGSLYGIYRPLSQF--LQSPWEQRAKIALQLLE   70 (188)
T ss_pred             cHHHHHHHcCCC-------CCCCCeeeECC--------CEEEEEeecCccccccccccccc--cccCHHHHHHHHHHHHH
Confidence            477777777762       35778887531        256789886 444321   1111  12689999999999999


Q ss_pred             HHHHHhhCC--CcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        189 GLNYLHTKC--RIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       189 aL~~LH~~~--givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      .+.+++..-  .+.-.|++|+|+-++ ++++++++|........
T Consensus        71 ~l~~l~~~~~~~~~lcDv~~~nfgv~-~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   71 LLEELDHGPLGFFYLCDVSPDNFGVN-DDGRLKLIDLDDVFVED  113 (188)
T ss_pred             HHHHHhcCCCCcEEEeecchHHeEEe-CCCcEEEEechhcchhH
Confidence            999999832  455679999999996 44889999998765443

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0576|consensus

Probab=96.92  E-value=0.00028  Score=66.37  Aligned_cols=157  Identities=15%  Similarity=0.114  Sum_probs=104.7

Q ss_pred             ceEEEEEecccCceeEEEecceeE----EEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSKTQ----VLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~~~----~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      .|.....+++|+++.+++++....    ..++.. .....-++++|.++++++      + .+..++...    ...+.+
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~h~fvs~-~l~~rl~~eLLdK~n~P~------~-~v~~~~d~~----~E~~~~  310 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-TLSRRLAIELLDKVNNPN------P-VVRYLEDYD----GEDYLW  310 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhheeceeecc-chhhHHHHHHHHHccCCC------C-cccccccCC----cccccc
Confidence            356667789999999999887431    122211 234455788899988854      1 344444443    778899


Q ss_pred             EEeccCCcc--HHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        153 MVFEVLGHN--LLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       153 iv~e~~~~~--l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      ++|+++++.  ....+.... -.+..-+...+.+.-+.+|+++|+. .=+|||    ||+...  ...+..||+......
T Consensus       311 i~~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~-~~~~~d----~~l~s~--~~~~~~~~~v~~~L~  382 (829)
T KOG0576|consen  311 IPMRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSS-YKVHRD----NILGSE--EEVKLLDFAVPPQLT  382 (829)
T ss_pred             hhhhhhcCCccccccCChhh-Hhhhhhhhhhhhhhhcccccccccc-cccCcc----cccccc--cccccccccCCcccC
Confidence            999999543  222111111 1144455566677777889999987 668999    888733  688999999877665


Q ss_pred             hCCCCCCcccCCCCccchhhhhhc
Q psy16752        231 TGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       231 ~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ... .+.+..+|+.++|||+..+.
T Consensus       383 ~~~-~~~t~~~~~~~~~pev~~~~  405 (829)
T KOG0576|consen  383 RTM-KPRTAIGTPEPLAPEVIQEN  405 (829)
T ss_pred             ccc-ccccCCCCCCCCCchhhccc
Confidence            543 56678899999999976543

>PRK05231 homoserine kinase; Provisional

Probab=96.82  E-value=0.03  Score=49.37  Aligned_cols=29  Identities=21%  Similarity=0.266  Sum_probs=24.3

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ++||+|+.|.||+++ ++....++||+.+.
T Consensus       188 ~liHgD~~~~Nil~~-~~~~~~iIDf~~~~  216 (319)
T PRK05231        188 GVIHADLFRDNVLFE-GDRLSGFIDFYFAC  216 (319)
T ss_pred             ccCCCCCCCCcEEEE-CCceEEEEeccccc
Confidence            899999999999995 43455899999865

>KOG2268|consensus

Probab=96.77  E-value=0.0029  Score=55.47  Aligned_cols=126  Identities=15%  Similarity=0.250  Sum_probs=79.3

Q ss_pred             eEEEEEecccCceeEEEeccee-----------------EEEecC----------C---CChhhHHHHHHHHhhhcCCCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSKT-----------------QVLVSP----------Q---FPETALDEIKLLKCVRDGDVN  127 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~~-----------------~~~~~~----------~---~~~~~~~E~~~l~~l~~~~~~  127 (284)
                      +.+..+||-|--+-||.+.+..                 .++...          +   ..-.+.+|...|+.|....+.
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp  173 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP  173 (465)
T ss_pred             hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence            6778899999999999887621                 111100          0   122356788888888763221


Q ss_pred             CcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       128 ~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                            ++..+        +....|+|||++.|-.+..+..-    .+.+.   +...+..-+--|..+ |+||+|..-=
T Consensus       174 ------VPkpi--------D~~RH~Vvmelv~g~Pl~~v~~v----~d~~~---ly~~lm~~Iv~la~~-GlIHgDFNEF  231 (465)
T KOG2268|consen  174 ------VPKPI--------DHNRHCVVMELVDGYPLRQVRHV----EDPPT---LYDDLMGLIVRLANH-GLIHGDFNEF  231 (465)
T ss_pred             ------CCCcc--------cccceeeHHHhhcccceeeeeec----CChHH---HHHHHHHHHHHHHHc-Cceecccchh
Confidence                  22222        45668899999955333222211    23333   344444445667778 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccch
Q psy16752        208 NVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a  226 (284)
                      ||++. ++..++++||=-+
T Consensus       232 Nimv~-dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  232 NIMVK-DDDKIVVIDFPQM  249 (465)
T ss_pred             eeEEe-cCCCEEEeechHh
Confidence            99995 4588999999643

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.75  E-value=0.0038  Score=55.50  Aligned_cols=90  Identities=18%  Similarity=0.146  Sum_probs=66.2

Q ss_pred             hccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        134 VVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       134 i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      ++.+...+.+...++.+.|++|++.|+.+.- +.     .-.++++..++.+.+.-+.-+..+..+-|||+...||||+ 
T Consensus       284 ~~~~e~~~vv~~de~~y~yl~~kdhgt~is~-ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-  356 (488)
T COG5072         284 SVFLETLKVVSLDETLYLYLHFKDHGTPISI-IK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-  356 (488)
T ss_pred             chhhhcceEEecCCceEEEEEEecCCceeee-ee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-
Confidence            4444444444445788999999988776541 11     1457788889988877777776655789999999999995 


Q ss_pred             CCCcEEEEeccchhHhhh
Q psy16752        214 DEARVKTLALNATELAAT  231 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~  231 (284)
                       .|.|.|+||-+++...+
T Consensus       357 -~GnvtLIDfklsRl~~~  373 (488)
T COG5072         357 -EGNVTLIDFKLSRLSYS  373 (488)
T ss_pred             -cCceEEEEeeeeecccC
Confidence             69999999999884443

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.73  E-value=0.019  Score=49.96  Aligned_cols=30  Identities=20%  Similarity=0.234  Sum_probs=24.9

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ++||+|+.|.||+++. +..+.++||+.+..
T Consensus       176 ~l~HgD~~~~Nil~~~-~~~~~iIDfe~a~~  205 (296)
T cd05153         176 GVIHADLFRDNVLFDG-DELSGVIDFYFACT  205 (296)
T ss_pred             cCCccCcCcccEEEeC-CceEEEeehhhhcC
Confidence            7999999999999954 35568999987653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.71  E-value=0.0056  Score=52.24  Aligned_cols=32  Identities=13%  Similarity=0.209  Sum_probs=25.8

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhhh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAAT  231 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~  231 (284)
                      .++|+|+.|.||+++.+ + +.++||..+....+
T Consensus       147 ~l~H~Dl~~~Nil~~~~-~-~~lIDwE~a~~gdp  178 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQ-G-LKLIDWEYASDGDI  178 (256)
T ss_pred             eeecCCCCcCcEEEeCC-C-CEEEeccccCcCCH
Confidence            58999999999999654 3 78999998764443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.37  E-value=0.067  Score=48.75  Aligned_cols=29  Identities=10%  Similarity=0.283  Sum_probs=24.6

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .++|+|+.|.|||+..+  .++++||..+.+
T Consensus       224 ~l~HgDl~~gni~~~~~--~~~viD~E~a~~  252 (401)
T PRK09550        224 ALLHGDLHTGSIFVTEE--ETKVIDPEFAFY  252 (401)
T ss_pred             ceeeccCCcccEEeeCC--CcEEEecccccc
Confidence            79999999999999544  699999987653

>KOG2137|consensus

Probab=96.24  E-value=0.0034  Score=59.61  Aligned_cols=70  Identities=17%  Similarity=0.297  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCC---------cccCCCCccchhhhhh
Q psy16752        183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPV---------SFCSTAPVQEYSELSR  253 (284)
Q Consensus       183 ~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~---------~~~gt~~~~aPE~l~~  253 (284)
                      +.+++.||.|+|...++||+.|.|++|.++.. +..|++.|+.+.....+...+.         ...--.-|.|||.+.+
T Consensus       105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~-~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNAN-GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hhcccchhhhhccCcceeecccchhheeeccC-cceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            44556999999988799999999999999554 8999999998776655332221         1122345788888766

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=95.72  E-value=0.016  Score=48.59  Aligned_cols=36  Identities=14%  Similarity=0.205  Sum_probs=29.1

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCC
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAATGH  233 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~  233 (284)
                      +++|+|+.|.|||++.+++.+.++||..|....+..
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~  206 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAF  206 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchhe
Confidence            699999999999997534689999999877555443

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=95.40  E-value=0.13  Score=46.23  Aligned_cols=31  Identities=10%  Similarity=0.263  Sum_probs=24.8

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      .++|+|+.+.||+++++  .++++|+..+.+..
T Consensus       193 ~llHGDl~~gNi~~~~~--~~~~iD~e~~~~G~  223 (370)
T TIGR01767       193 TLLHGDLHSGSIFVSEH--ETKVIDPEFAFYGP  223 (370)
T ss_pred             eeeeccCCcccEEEcCC--CCEEEcCcccccCc
Confidence            79999999999999544  57899998765433

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.15  E-value=0.36  Score=44.13  Aligned_cols=28  Identities=14%  Similarity=0.307  Sum_probs=22.7

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .++|+|+.|.|||++.+  ..+++|..++.
T Consensus       231 ~L~HGDl~~g~i~~~~~--~~~~id~ef~~  258 (418)
T PLN02756        231 ALVHGDLHTGSVMVTPD--STQVIDPEFAF  258 (418)
T ss_pred             ceeecCCCCCcEEEcCC--CceEecchhhc
Confidence            69999999999999654  47888877554

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.13  E-value=0.047  Score=47.81  Aligned_cols=28  Identities=21%  Similarity=0.243  Sum_probs=24.0

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ++||+|+.+.||+++.  +.+.++||+.+.
T Consensus       188 ~liHgD~~~~Nil~~~--~~i~lIDfd~~~  215 (313)
T TIGR02906       188 GFCHQDYAYHNILLKD--NEVYVIDFDYCT  215 (313)
T ss_pred             ceEcCCCCcccEEEeC--CcEEEEECcccc
Confidence            7999999999999954  568999999654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PHA03111 Ser/Thr kinase; Provisional

Probab=95.10  E-value=0.038  Score=48.68  Aligned_cols=55  Identities=22%  Similarity=0.383  Sum_probs=37.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhC--C-CcEecCCCCCCeeEeeCCC-----------------cEEEEeccchhHhh
Q psy16752        176 LENVRSIIRQILQGLNYLHTK--C-RIIHTDIKPENVLLCVDEA-----------------RVKTLALNATELAA  230 (284)
Q Consensus       176 ~~~~~~i~~qi~~aL~~LH~~--~-givHrDiKp~NIll~~~~~-----------------~v~l~Dfg~a~~~~  230 (284)
                      .+-++.++.||+.-.-.+-..  | .++|-||||+|||+-+...                 .++|-||.+++...
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~  352 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVAN  352 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHcc
Confidence            566888899987654333211  1 6999999999999964431                 55667888777543

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.02  E-value=0.04  Score=48.39  Aligned_cols=29  Identities=28%  Similarity=0.384  Sum_probs=25.1

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ++||+|+.+.||+++.+ +.+.++||+.+.
T Consensus       188 ~l~HgD~~~~Nvl~~~~-~~~~vIDfd~~~  216 (307)
T TIGR00938       188 GVIHADLFPDNVLFDGD-SVKGVIDFYFAC  216 (307)
T ss_pred             ccCCCCCCcCcEEEECC-ceEEEeeccccc
Confidence            89999999999999654 566899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=94.91  E-value=0.038  Score=48.87  Aligned_cols=79  Identities=20%  Similarity=0.225  Sum_probs=46.3

Q ss_pred             EEEeccCCccHHH---HHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhC--C-CcEecCCCCCCeeEeeCC----------
Q psy16752        152 CMVFEVLGHNLLK---LIVKSKYRGIPLENVRSIIRQILQGLNYLHTK--C-RIIHTDIKPENVLLCVDE----------  215 (284)
Q Consensus       152 ~iv~e~~~~~l~~---~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~-givHrDiKp~NIll~~~~----------  215 (284)
                      .||+++.-++..+   ......+-..-.+-++.++.||+.-.-.+-..  | ..+|-||||+|||+-+..          
T Consensus       247 IIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~  326 (434)
T PF05445_consen  247 IIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNR  326 (434)
T ss_pred             EEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCe
Confidence            4788876443222   11111111123556788888885543212111  1 799999999999995432          


Q ss_pred             -------CcEEEEeccchhHhh
Q psy16752        216 -------ARVKTLALNATELAA  230 (284)
Q Consensus       216 -------~~v~l~Dfg~a~~~~  230 (284)
                             -.+++-||.+|+...
T Consensus       327 ~~vF~Epi~~~LnDFDfSqv~~  348 (434)
T PF05445_consen  327 NYVFKEPIRCCLNDFDFSQVAN  348 (434)
T ss_pred             EEEecccceeeecccCHHHhcc
Confidence                   266778888887554

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=94.83  E-value=0.06  Score=47.02  Aligned_cols=34  Identities=15%  Similarity=0.246  Sum_probs=27.8

Q ss_pred             CcEecCCCCCCeeEeeC---CCcEEEEeccchhHhhh
Q psy16752        198 RIIHTDIKPENVLLCVD---EARVKTLALNATELAAT  231 (284)
Q Consensus       198 givHrDiKp~NIll~~~---~~~v~l~Dfg~a~~~~~  231 (284)
                      ++||+|+.|.|||++.+   .+.+.++||..|....+
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p  216 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR  216 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence            68999999999999653   36899999998774443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PLN02236 choline kinase

Probab=94.67  E-value=0.051  Score=48.67  Aligned_cols=34  Identities=9%  Similarity=0.236  Sum_probs=28.3

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhhh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAAT  231 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~  231 (284)
                      .++|+|+++.|||++.+++.+.++||..+....+
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~  234 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYASYNPV  234 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhccccch
Confidence            6899999999999975557899999998775444

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=94.45  E-value=0.084  Score=43.19  Aligned_cols=34  Identities=15%  Similarity=0.318  Sum_probs=27.5

Q ss_pred             CcEecCCCCCCeeEeeCCC----cEEEEeccchhHhhh
Q psy16752        198 RIIHTDIKPENVLLCVDEA----RVKTLALNATELAAT  231 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~----~v~l~Dfg~a~~~~~  231 (284)
                      .++|+|+.+.||++..+..    .+.++||..+....+
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p  158 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSP  158 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCccceEEEecccCCcCCh
Confidence            7999999999999965432    799999998765544

subfamily of choline kinases

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.90  E-value=0.092  Score=45.29  Aligned_cols=51  Identities=18%  Similarity=0.276  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhC-CCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        177 ENVRSIIRQILQGLNYLHTK-CRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       177 ~~~~~i~~qi~~aL~~LH~~-~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ..+...+..+-.++.-++.. +-+||.|+.|+|+|.++ .+.+.++||..|..
T Consensus       132 ~~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~-~~~l~LIDWEyAg~  183 (269)
T COG0510         132 HLLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTD-KGGLFLIDWEYAGL  183 (269)
T ss_pred             HHHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcC-CCcEEEEecccCCC
Confidence            33444555555556655543 25999999999999955 38999999987653

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=93.80  E-value=0.1  Score=46.34  Aligned_cols=29  Identities=31%  Similarity=0.491  Sum_probs=24.5

Q ss_pred             cEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        199 IIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       199 ivHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      +||.|+.|.||+++.++..+-++||+.+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            99999999999996553358999999865

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=93.33  E-value=0.059  Score=46.66  Aligned_cols=34  Identities=15%  Similarity=0.350  Sum_probs=26.7

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhhh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAAT  231 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~  231 (284)
                      .+||+|+.|.|||++.+....-++||+.+....+
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDP  219 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDP  219 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCH
Confidence            5899999999999965434467999998765443

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=93.22  E-value=0.075  Score=43.87  Aligned_cols=31  Identities=23%  Similarity=0.448  Sum_probs=21.1

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .++|.|+.|.|||++..++.++++||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            6899999999999955568999999988763

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=92.73  E-value=0.34  Score=40.54  Aligned_cols=84  Identities=13%  Similarity=0.157  Sum_probs=54.3

Q ss_pred             hHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q psy16752        111 ALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGL  190 (284)
Q Consensus       111 ~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  190 (284)
                      +..+.+++.++..          |+++..      .....+-+++|.|-.--.          ..   .-.+.. =+.+|
T Consensus       105 y~nky~v~ArmhG----------ilrL~N------Dn~~~yGvIlE~Cy~~~i----------~~---~N~i~a-gi~~L  154 (308)
T PF07387_consen  105 YFNKYRVFARMHG----------ILRLKN------DNNYKYGVILERCYKIKI----------NF---SNFITA-GIKDL  154 (308)
T ss_pred             hhhhhhHHHHhhh----------eeEeec------CCCceeEEEEeeccCccc----------ch---hHHHHH-hHHHH
Confidence            4566777777765          666654      245556688888732100          01   111111 14567


Q ss_pred             HHHhhCC-CcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        191 NYLHTKC-RIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       191 ~~LH~~~-givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .-.|+.. +.+|+|-.|+|||-+. .+.+|+.|-+.
T Consensus       155 ~~fH~~~~~~lHGD~np~NiM~D~-~G~lKlVDP~~  189 (308)
T PF07387_consen  155 MDFHSENQHCLHGDCNPDNIMCDK-FGYLKLVDPVC  189 (308)
T ss_pred             HHhhccCCCeecCCCChhheeecC-CCCEEecChhh
Confidence            8888432 7999999999999854 48999999884

The function of this family is unknown.

>PRK10271 thiK thiamine kinase; Provisional

Probab=92.54  E-value=0.1  Score=42.33  Aligned_cols=32  Identities=9%  Similarity=0.197  Sum_probs=25.2

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhhh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAAT  231 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~  231 (284)
                      ..+|+|+.|.||+++.+ + ++++||+.+....+
T Consensus        78 ~p~H~D~~~~N~~~~~~-~-~~lIDwe~a~~gDp  109 (188)
T PRK10271         78 APLHMDVHAGNLVHSAS-G-LRLIDWEYAGDGDI  109 (188)
T ss_pred             eeecCCCCCccEEEECC-C-EEEEeCCcccCCCH
Confidence            47999999999998543 4 88999998764433

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=92.29  E-value=0.27  Score=43.76  Aligned_cols=36  Identities=19%  Similarity=0.328  Sum_probs=29.5

Q ss_pred             cEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC
Q psy16752        199 IIHTDIKPENVLLCVDEARVKTLALNATELAATGHK  234 (284)
Q Consensus       199 ivHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~  234 (284)
                      ++|.|+.+.|||++.+++.+.++||..|....+...
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fD  219 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYD  219 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccCCCccHHH
Confidence            799999999999976667899999998775554433

>PRK11768 serine/threonine protein kinase; Provisional

Probab=91.66  E-value=0.28  Score=43.49  Aligned_cols=28  Identities=25%  Similarity=0.404  Sum_probs=23.8

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ++||+|+.+.|||+ .+  .+.++||+.+..
T Consensus       197 ~liHgD~h~~NvL~-~d--~~~iIDFDd~~~  224 (325)
T PRK11768        197 LRLHGDCHPGNILW-RD--GPHFVDLDDARM  224 (325)
T ss_pred             cceecCCCchhccc-cC--CcEEEeCCCCCC
Confidence            79999999999999 34  578999998763

>PRK06149 hypothetical protein; Provisional

Probab=91.54  E-value=0.25  Score=50.47  Aligned_cols=30  Identities=20%  Similarity=0.257  Sum_probs=24.7

Q ss_pred             CcEecCCCCCCeeEeeCC----CcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDE----ARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~----~~v~l~Dfg~a~  227 (284)
                      ++||.|+.+.|||++.+.    ...-++|||.+.
T Consensus       209 g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        209 QAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            899999999999997553    235899999865

>KOG2269|consensus

Probab=91.37  E-value=0.67  Score=41.07  Aligned_cols=98  Identities=19%  Similarity=0.296  Sum_probs=66.7

Q ss_pred             HHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCCc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q psy16752        112 LDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGL  190 (284)
Q Consensus       112 ~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  190 (284)
                      .+|..-|.++....+.+|.   ++.+           ....+||.|+|. .+..--.+.  -.++....+....|++.++
T Consensus       333 EkEmhNL~RMq~~GlpcP~---vV~l-----------kkhvLVMsFiGd~~~aAPkLK~--v~l~d~E~~~aY~q~~~~M  396 (531)
T KOG2269|consen  333 EKEMHNLSRMQKHGLPCPQ---VVKL-----------KKHVLVMSFIGDQGLAAPKLKN--VELTDDERRNAYDQVQSIM  396 (531)
T ss_pred             HHHHHHHHHHHhcCCCCCc---eeee-----------ecceEEEEeecCCCCCCccccc--cccChHHHHHHHHHHHHHH
Confidence            3466666666654444433   2222           235689999953 222111111  2388888899999999999


Q ss_pred             HHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        191 NYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       191 ~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .-|-..|-+||-|+.-=|+|+.+  +.|-++|..-+-
T Consensus       397 ~~lY~Ec~LVHADlSEyN~Lw~~--gKvw~IDVsQsv  431 (531)
T KOG2269|consen  397 CRLYKECLLVHADLSEYNLLWTP--GKVWVIDVSQSV  431 (531)
T ss_pred             HHHHHhhheeecchhhhhheecC--CceEEEechhcc
Confidence            98877778999999999999954  489999987643

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=91.07  E-value=0.17  Score=44.67  Aligned_cols=32  Identities=19%  Similarity=0.349  Sum_probs=26.6

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAA  230 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~  230 (284)
                      .++|+|+.+.||+++++ +.+-++||+.+..-.
T Consensus       199 ~lvHGD~~~gNlii~~~-~~~gVlDwe~~~lGD  230 (321)
T COG3173         199 VLVHGDYRPGNLIIDPG-RPTGVLDWELATLGD  230 (321)
T ss_pred             eeeeCCcccCCEEEeCC-CeeEEEeccccccCC
Confidence            59999999999999665 559999999876433

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=90.76  E-value=0.28  Score=42.64  Aligned_cols=35  Identities=17%  Similarity=0.299  Sum_probs=28.2

Q ss_pred             CcEecCCCCCCeeEeeCCC----cEEEEeccchhHhhhC
Q psy16752        198 RIIHTDIKPENVLLCVDEA----RVKTLALNATELAATG  232 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~----~v~l~Dfg~a~~~~~~  232 (284)
                      -++|+|+++.|||+..++.    .++++||..+....+.
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~  254 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPA  254 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeeccccccCCCcH
Confidence            4999999999999976533    7999999987655443

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK06148 hypothetical protein; Provisional

Probab=90.43  E-value=0.41  Score=49.15  Aligned_cols=30  Identities=20%  Similarity=0.338  Sum_probs=24.4

Q ss_pred             CcEecCCCCCCeeEeeCC--CcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDE--ARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~--~~v~l~Dfg~a~  227 (284)
                      ++||.|+.+.|||++.+.  ...-|+|||.+.
T Consensus       204 ~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        204 QVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             ceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            799999999999996553  234499999865

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=89.39  E-value=0.84  Score=39.78  Aligned_cols=72  Identities=14%  Similarity=0.110  Sum_probs=39.4

Q ss_pred             EEEEEecccCceeEEEecc---eeEEEecC-CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEE
Q psy16752         79 RVTRKLGWGHFSTVWFTGS---KTQVLVSP-QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMV  154 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~---~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv  154 (284)
                      +-...|+.|....+|+...   +..+|+.. .....+..|..-|+.|.....     ..+++++.+..    ....-|+|
T Consensus        20 ~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~-----~~vP~vi~~G~----~~~~~fLl   90 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANP-----IRVPKVIAWGE----YDDDAFLL   90 (288)
T ss_dssp             -EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTT-----SBS--EEEEEE-----SSCCEEE
T ss_pred             eeeEecCCCChhheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCC-----CCCCeEEEEEe----ecCCceEE
Confidence            4456788888888887764   23444433 335668899999999854221     22444454333    33344899


Q ss_pred             eccCC
Q psy16752        155 FEVLG  159 (284)
Q Consensus       155 ~e~~~  159 (284)
                      |||+.
T Consensus        91 le~l~   95 (288)
T PF03881_consen   91 LEFLE   95 (288)
T ss_dssp             EE---
T ss_pred             EEeec
Confidence            99983

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	284
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		6e-70
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		3e-69
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		2e-65
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		4e-35
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		1e-34
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		3e-14
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-14
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-14
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		2e-12
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		2e-12
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		3e-12
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		2e-11
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-11
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		5e-11
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		5e-11
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-10
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-10
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-10
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-10
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-10
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-10
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-10
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-10
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-10
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-10
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-10
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		7e-10
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-10
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		7e-10
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		7e-10
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-10
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		8e-10
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		8e-10
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		8e-10
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		8e-10
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		8e-10
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		8e-10
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-10
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-10
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		8e-10
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		8e-10
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		8e-10
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		8e-10
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		8e-10
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-10
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		8e-10
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		8e-10
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		8e-10
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		8e-10
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		9e-10
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		9e-10
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-09
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-09
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-09
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-09
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-09
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-08
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		7e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		9e-08
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		9e-08
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		3e-07
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-07
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-07
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		7e-07
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		8e-07
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		9e-07
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-06
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-06
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-06
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-06
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-06
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-06
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-06
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-06
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		4e-06
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		4e-06
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		5e-06
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		6e-06
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		6e-06
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		6e-06
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		4e-05
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		4e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-05
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		8e-05
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		8e-05
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		9e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-04
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-04
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		1e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-04
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-04
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-04
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-04
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		3e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-04
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		3e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-04
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-04
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-04
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		3e-04
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-04
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-04
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		3e-04
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-04
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-04
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		4e-04
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		4e-04
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		4e-04
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		4e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		4e-04
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		4e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		4e-04
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		4e-04
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-04
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		4e-04
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		4e-04
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		4e-04
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		5e-04
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		5e-04
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		5e-04
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		5e-04
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-04
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		7e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		7e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		8e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		9e-04
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		9e-04

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  260 bits (664), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 128/210 (60%), Positives = 154/210 (73%), Gaps = 9/210 (4%)
Query: 47  FSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS-------KT 99
             SD++EQEDP DYCKGGYHPVKIG LFN RY V RKLGWGHFSTVW             
Sbjct: 2   MGSDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAM 61
Query: 100 QVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL 158
           +V+ S Q + ETALDEIKLLKCVR+ D +DP ++ VVQL+DDFKI G+NG HVCMVFEVL
Sbjct: 62  KVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVL 121
Query: 159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV 218
           GH+LLK I+KS Y+G+P+  V+SIIRQ+LQGL+YLH+KC+IIHTDIKPEN+L+CVD+A V
Sbjct: 122 GHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYV 181
Query: 219 KXXXXXXXXXXXXGHKLPV-SFCSTAPVQE 247
           +            G   P  S  STAP  +
Sbjct: 182 RRMAAEATEWQKAGAPPPSGSAVSTAPAAD 211

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  258 bits (658), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 132/208 (63%), Positives = 153/208 (73%), Gaps = 9/208 (4%)
Query: 47  FSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---T 99
             SD+DEQEDPNDYCKGGYH VKIG LFN RY V RKLGWGHFSTVW +    G K    
Sbjct: 8   LGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAM 67
Query: 100 QVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL 158
           +V+ S + + ETALDEI+LLK VR+ D NDP RE VVQLLDDFKI GVNGTH+CMVFEVL
Sbjct: 68  KVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL 127
Query: 159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV 218
           GH+LLK I+KS Y+G+PL  V+ II+Q+LQGL+YLHTKCRIIHTDIKPEN+LL V+E  +
Sbjct: 128 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI 187
Query: 219 KXXXXXXXXXXXXGHKLPV-SFCSTAPV 245
           +            G   P  S  STAP 
Sbjct: 188 RRLAAEATEWQRSGAPPPSGSAVSTAPA 215

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  245 bits (625), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 126/199 (63%), Positives = 146/199 (73%), Gaps = 9/199 (4%)
Query: 56  DPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFT----GSK---TQVLVSPQ-F 107
           DPNDYCKGGYH VKIG LFN RY V RKLGWGHFSTVW +    G K    +V+ S + +
Sbjct: 1   DPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY 60
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
            ETALDEI+LLK VR+ D NDP RE VVQLLDDFKI GVNGTH+CMVFEVLGH+LLK I+
Sbjct: 61  TETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII 120
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKXXXXXXXX 227
           KS Y+G+PL  V+ II+Q+LQGL+YLHTKCRIIHTDIKPEN+LL V+E  ++        
Sbjct: 121 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATE 180
Query: 228 XXXXGHKLPV-SFCSTAPV 245
               G   P  S  STAP 
Sbjct: 181 WQRSGAPPPSGSAVSTAPA 199

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  144 bits (364), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/167 (49%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 59  DYCKGGYHPVKIGMLFNN-RYRVTRKLGWGHFSTVWFTG---SKTQVLV-----SPQFPE 109
           DY  GGYHP   G  + + RY + RKLGWGHFSTVW      + T V +        + E
Sbjct: 1   DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 110 TALDEIKLLKCVRDGD---VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            A DEIKLL+ V D D    +      +++LLD F   G NG HV MVFEVLG NLL LI
Sbjct: 61  AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120
Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV 213
            K ++RGIPL  V+ I +Q+L GL+Y+H +C IIHTDIKPENVL+ +
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  143 bits (361), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/167 (49%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 59  DYCKGGYHPVKIGMLFNN-RYRVTRKLGWGHFSTVWFTG---SKTQVLV-----SPQFPE 109
           DY  GG+HP   G  + + RY + RKLGWGHFSTVW      + T V +        + E
Sbjct: 1   DYRPGGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 110 TALDEIKLLKCVRDGD---VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            A DEIKLL+ V D D    +      +++LLD F   G NG HV MVFEVLG NLL LI
Sbjct: 61  AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120
Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV 213
            K ++RGIPL  V+ I +Q+L GL+Y+H +C IIHTDIKPENVL+ +
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 15/143 (10%)
Query: 77  RYRVTRKLGWGHFSTVWFT--------GSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           RY V + +G G F  V            +   V    +F   A +EI++L+ +R  D ++
Sbjct: 98  RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
                V+ +L++F        H+CM FE+L  NL +LI K+K++G  L  VR     ILQ
Sbjct: 158 TMN--VIHMLENFTF----RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 189 GLNYLHTKCRIIHTDIKPENVLL 211
            L+ LH K RIIH D+KPEN+LL
Sbjct: 212 CLDALH-KNRIIHCDLKPENILL 233

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 15/143 (10%)
Query: 77  RYRVTRKLGWGHFSTVWFT--------GSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           RY V + +G G F  V            +   V    +F   A +EI++L+ +R  D ++
Sbjct: 98  RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
                V+ +L++F        H+CM FE+L  NL +LI K+K++G  L  VR     ILQ
Sbjct: 158 TMN--VIHMLENFTF----RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 189 GLNYLHTKCRIIHTDIKPENVLL 211
            L+ LH K RIIH D+KPEN+LL
Sbjct: 212 CLDALH-KNRIIHCDLKPENILL 233

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 15/143 (10%)
Query: 77  RYRVTRKLGWGHFSTVWFT--------GSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           RY V + +G G F  V            +   V    +F   A +EI++L+ +R  D ++
Sbjct: 98  RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
                V+ +L++F        H+CM FE+L  NL +LI K+K++G  L  VR     ILQ
Sbjct: 158 TMN--VIHMLENFTF----RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 189 GLNYLHTKCRIIHTDIKPENVLL 211
            L+ LH K RIIH D+KPEN+LL
Sbjct: 212 CLDALH-KNRIIHCDLKPENILL 233

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 62  KGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW----FTGSKTQVLVS-----PQFPETAL 112
           K G+   +IG     RY +   LG G F  V         K+QV +       ++ E A 
Sbjct: 37  KEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR 96
Query: 113 DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYR 172
            EI +LK +++ D  + +    V + D F   G    H+C+ FE+LG N  + + ++ ++
Sbjct: 97  LEINVLKKIKEKDKENKFL--CVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQ 150
Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
             PL +VR +  Q+   L +LH   ++ HTD+KPEN+L    E
Sbjct: 151 PYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSE 192

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 62  KGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW----FTGSKTQVLVS-----PQFPETAL 112
           K G+   +IG     RY +   LG G F  V         K+QV +       ++ E A 
Sbjct: 14  KEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR 73
Query: 113 DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYR 172
            EI +LK +++ D  + +    V + D F   G    H+C+ FE+LG N  + + ++ ++
Sbjct: 74  LEINVLKKIKEKDKENKFL--CVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQ 127
Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
             PL +VR +  Q+   L +LH   ++ HTD+KPEN+L    E
Sbjct: 128 PYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSE 169

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 62  KGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW----FTGSKTQVLVS-----PQFPETAL 112
           K G+   +IG     RY +   LG G F  V         K+QV +       ++ E A 
Sbjct: 5   KEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR 64
Query: 113 DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYR 172
            EI +LK +++ D  + +    V + D F   G    H+C+ FE+LG N  + + ++ ++
Sbjct: 65  LEINVLKKIKEKDKENKFL--CVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQ 118
Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
             PL +VR +  Q+   L +LH   ++ HTD+KPEN+L    E
Sbjct: 119 PYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSE 160

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 71  GMLFNNRYRVTRKLGWGHFSTVW------FTGSKTQVLVSP---QFPETALDEIKLLKCV 121
           G + + RY +   LG G F  V         G    V +     ++ E A  EI++L+ +
Sbjct: 9   GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL 68
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRS 181
              D N  +R   VQ+L+ F+  G    H+C+VFE+LG +    I ++ +    L+++R 
Sbjct: 69  NTTDPNSTFR--CVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +  QI + +N+LH+  ++ HTD+KPEN+L 
Sbjct: 123 MAYQICKSVNFLHSN-KLTHTDLKPENILF 151

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 71  GMLFNNRYRVTRKLGWGHFSTVW------FTGSKTQVLVSP---QFPETALDEIKLLKCV 121
           G + + RY +   LG G F  V         G    V +     ++ E A  EI++L+ +
Sbjct: 9   GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL 68
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRS 181
              D N  +R   VQ+L+ F+  G    H+C+VFE+LG +    I ++ +    L+++R 
Sbjct: 69  NTTDPNSTFR--CVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +  QI + +N+LH+  ++ HTD+KPEN+L 
Sbjct: 123 MAYQICKSVNFLHSN-KLTHTDLKPENILF 151

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
Query: 70  IGMLFNNRYRVTRKLGWGHFSTVW---------FTGSKT-----QVLVSPQFPETALDEI 115
           +G +  +RY    ++G G + TV+         F   K+             P + + E+
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 116 KLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT----HVCMVFEVLGHNLLKLIVKSKY 171
            LL+ +   +        VV+L+D   +C  + T     V +VFE +  +L   + K+  
Sbjct: 63  ALLRRLEAFE-----HPNVVRLMD---VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPP 114
Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
            G+P E ++ ++RQ L+GL++LH  C I+H D+KPEN+L+ 
Sbjct: 115 PGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVT 154

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 69  KIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVR------ 122
           K GML NN + V RK+G G F          +VL+           +K+++ ++      
Sbjct: 28  KKGMLLNNAFLVIRKMGDGTFG---------RVLLCQHIDNKKYYAVKVVRNIKKYTRSA 78
Query: 123 --DGDVNDPYRERVVQLLDDFKICG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN 178
             + D+    +   +   +  K  G  +   H+C++FE LG +L ++I ++ Y G  +E+
Sbjct: 79  KIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIED 138
Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           ++    +IL+ LNYL  K  + HTD+KPEN+LL
Sbjct: 139 IKLYCIEILKALNYLR-KMSLTHTDLKPENILL 170

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 68  VKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQ--------VLVSPQFPETALDEIKLLK 119
           VK G  + +RY +   +G G F  V     + +        +     F   A  E++LL+
Sbjct: 46  VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV 179
            +   D    Y   +V L   F        H+C+VFE+L +NL  L+  + +RG+ L   
Sbjct: 106 LMNKHDTEMKYY--IVHLKRHFMF----RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLT 159
Query: 180 RSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLC 212
           R   +Q+   L +L T +  IIH D+KPEN+LLC
Sbjct: 160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLC 193

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 68  VKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQ--------VLVSPQFPETALDEIKLLK 119
           VK G  + +RY +   +G G F  V     + +        +     F   A  E++LL+
Sbjct: 27  VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV 179
            +   D    Y   +V L   F        H+C+VFE+L +NL  L+  + +RG+ L   
Sbjct: 87  LMNKHDTEMKYY--IVHLKRHFMF----RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLT 140
Query: 180 RSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLC 212
           R   +Q+   L +L T +  IIH D+KPEN+LLC
Sbjct: 141 RKFAQQMCTALLFLATPELSIIHCDLKPENILLC 174

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 68  VKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQ--------VLVSPQFPETALDEIKLLK 119
           VK G  + +RY +   +G G F  V     + +        +     F   A  E++LL+
Sbjct: 46  VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV 179
            +   D    Y   +V L   F        H+C+VFE+L +NL  L+  + +RG+ L   
Sbjct: 106 LMNKHDTEMKYY--IVHLKRHFMF----RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLT 159
Query: 180 RSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLC 212
           R   +Q+   L +L T +  IIH D+KPEN+LLC
Sbjct: 160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLC 193

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 24/155 (15%)
Query: 73  LFNNRYRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQ--FPETALDEIKLLKCV 121
           +  +RY    ++G G + TV+         F   K+  + + +   P + + E+ LL+ +
Sbjct: 1   MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGT----HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
              +        VV+L+D   +C  + T     V +VFE +  +L   + K+   G+P E
Sbjct: 61  EAFE-----HPNVVRLMD---VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
            ++ ++RQ L+GL++LH  C I+H D+KPEN+L+ 
Sbjct: 113 TIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVT 146

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 24/155 (15%)
Query: 73  LFNNRYRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQ--FPETALDEIKLLKCV 121
           +  +RY    ++G G + TV+         F   K+  + + +   P + + E+ LL+ +
Sbjct: 1   MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGT----HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
              +        VV+L+D   +C  + T     V +VFE +  +L   + K+   G+P E
Sbjct: 61  EAFE-----HPNVVRLMD---VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
            ++ ++RQ L+GL++LH  C I+H D+KPEN+L+ 
Sbjct: 113 TIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVT 146

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 24/155 (15%)
Query: 73  LFNNRYRVTRKLGWGHFSTVW---------FTGSKTQVLVSPQ--FPETALDEIKLLKCV 121
           +  +RY    ++G G + TV+         F   K+  + + +   P + + E+ LL+ +
Sbjct: 1   MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGT----HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
              +        VV+L+D   +C  + T     V +VFE +  +L   + K+   G+P E
Sbjct: 61  EAFE-----HPNVVRLMD---VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
            ++ ++RQ L+GL++LH  C I+H D+KPEN+L+ 
Sbjct: 113 TIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVT 146

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 47  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLSMDLKKFMD 94
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KPEN+L+  + A
Sbjct: 95  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGA 142

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 49  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLSMDLKKFMD 96
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KPEN+L+  + A
Sbjct: 97  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGA 144

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 48  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 95
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KPEN+L+  + A
Sbjct: 96  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGA 143

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 47  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 94
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KPEN+L+  + A
Sbjct: 95  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGA 142

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL++ H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLSFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 48  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 95
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 96  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 143

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 47  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 94
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 95  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 142

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 53  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 100
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 101 ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 148

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 47  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 94
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 95  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 142

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 47  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 94
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 95  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 142

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 49  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 96
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 97  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 144

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 50  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 97
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 98  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 145

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 49  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 96
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 97  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 144

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 48  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 95
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 96  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 143

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 53  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 100
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 101 ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 148

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 70  IGMLFNNRYRVTRKLGWGHFSTV------WFTGSKTQVLV---SPQFPETALDEIKLLKC 120
           +G     RY +   LG G F  V         G++  + +     ++ E A  EI +L+ 
Sbjct: 27  VGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEK 86
Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVR 180
           + + D ++  +   VQ+ D F   G    H+C+ FE+LG +    +  + Y   P+  VR
Sbjct: 87  INEKDPDN--KNLCVQMFDWFDYHG----HMCISFELLGLSTFDFLKDNNYLPYPIHQVR 140
Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +  Q+ Q + +LH   ++ HTD+KPEN+L 
Sbjct: 141 HMAFQLCQAVKFLHDN-KLTHTDLKPENILF 170

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 45  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 92
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 93  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 140

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 45  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 92
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 93  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 140

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 45  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 92
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 93  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 140

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 45  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 92
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 93  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 140

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 141

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 45  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 92
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 93  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 140

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K + 
Sbjct: 50  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKKFMD 97
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 98  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 145

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L   + 
Sbjct: 46  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKDFMD 93
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KPEN+L+  + A
Sbjct: 94  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPENLLINTEGA 141

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L   + 
Sbjct: 49  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLSMDLKDFMD 96
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 97  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 144

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L   + 
Sbjct: 48  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLSMDLKDFMD 95
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 96  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 143

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L   + 
Sbjct: 49  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEFLHQDLKTFMD 96
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 97  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 144

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE +  +L K + 
Sbjct: 49  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEHVDQDLKKFMD 96
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 97  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 144

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIV 167
           P TA+ EI LLK     ++N P    +V+LLD           + +VFE +  +L   + 
Sbjct: 45  PSTAIREISLLK-----ELNHP---NIVKLLDVIH----TENKLYLVFEHVHQDLKTFMD 92
Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+  + A
Sbjct: 93  ASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGA 140

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 141 FKICGVN----GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTK 196
           F +C V+     T + +VFE +  +L   + K    G+P E ++ ++ Q+L+GL++LH+ 
Sbjct: 80  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139
Query: 197 CRIIHTDIKPENVLL 211
            R++H D+KP+N+L+
Sbjct: 140 -RVVHRDLKPQNILV 153

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 141 FKICGVN----GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTK 196
           F +C V+     T + +VFE +  +L   + K    G+P E ++ ++ Q+L+GL++LH+ 
Sbjct: 80  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139
Query: 197 CRIIHTDIKPENVLL 211
            R++H D+KP+N+L+
Sbjct: 140 -RVVHRDLKPQNILV 153

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 141 FKICGVN----GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTK 196
           F +C V+     T + +VFE +  +L   + K    G+P E ++ ++ Q+L+GL++LH+ 
Sbjct: 80  FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139
Query: 197 CRIIHTDIKPENVLL 211
            R++H D+KP+N+L+
Sbjct: 140 -RVVHRDLKPQNILV 153

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 28/152 (18%)
Query: 73  LFNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQF-------PETALDEIKLLKC 120
           +F++RY+  R LG G F  V       TG +  V V  +         E+ L E++LLK 
Sbjct: 46  IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK- 104
Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV-LGHNLLKLIVKSKYRGIPLENV 179
                ++ P    +++L + F+  G    +  +V EV  G  L   I+ S+ R   ++  
Sbjct: 105 ----QLDHP---NIMKLYEFFEDKG----YFYLVGEVYTGGELFDEII-SRKRFSEVDAA 152
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           R IIRQ+L G+ Y+H K +I+H D+KPEN+LL
Sbjct: 153 R-IIRQVLSGITYMH-KNKIVHRDLKPENLLL 182

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 28/152 (18%)
Query: 73  LFNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQF-------PETALDEIKLLKC 120
           +F++RY+  R LG G F  V       TG +  V V  +         E+ L E++LLK 
Sbjct: 47  IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK- 105
Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV-LGHNLLKLIVKSKYRGIPLENV 179
                ++ P    +++L + F+  G    +  +V EV  G  L   I+ S+ R   ++  
Sbjct: 106 ----QLDHP---NIMKLYEFFEDKG----YFYLVGEVYTGGELFDEII-SRKRFSEVDAA 153
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           R IIRQ+L G+ Y+H K +I+H D+KPEN+LL
Sbjct: 154 R-IIRQVLSGITYMH-KNKIVHRDLKPENLLL 183

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 28/152 (18%)
Query: 73  LFNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQF-------PETALDEIKLLKC 120
           +F++RY+  R LG G F  V       TG +  V V  +         E+ L E++LLK 
Sbjct: 23  IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK- 81
Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV-LGHNLLKLIVKSKYRGIPLENV 179
                ++ P    +++L + F+  G    +  +V EV  G  L   I+ S+ R   ++  
Sbjct: 82  ----QLDHP---NIMKLYEFFEDKG----YFYLVGEVYTGGELFDEII-SRKRFSEVDAA 129
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           R IIRQ+L G+ Y+H K +I+H D+KPEN+LL
Sbjct: 130 R-IIRQVLSGITYMH-KNKIVHRDLKPENLLL 159

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 75  NNRYRVTRKLGWGHFSTVWF-----TGSKTQV---LVSPQFPETALDEIKLLKCVRDGDV 126
            NRYR+ RK+G G F  ++       G +  +    V  + P+  + E K+ K ++ G V
Sbjct: 8   GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMMQ-GGV 65
Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
             P            + CG  G +  MV E+LG +L  L      R   L+ V  +  Q+
Sbjct: 66  GIP----------TIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQM 114
Query: 187 LQGLNYLHTKCRIIHTDIKPENVLL 211
           +  + Y+H+K   IH D+KP+N L+
Sbjct: 115 ISRIEYIHSK-NFIHRDVKPDNFLM 138

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 76  NRYRVTRKLGWGHFSTVWF-----TGSKTQV---LVSPQFPETALDEIKLLKCVRDGDVN 127
           N+YR+ RK+G G F  ++      +G +  +    V  + P+  + E K  K ++ G V 
Sbjct: 9   NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHI-ESKFYKMMQ-GGVG 66
Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
            P            K CG  G +  MV E+LG +L  L      R   L+ V  +  Q++
Sbjct: 67  IP----------SIKWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMI 115
Query: 188 QGLNYLHTKCRIIHTDIKPENVLL 211
             + Y+H+K   IH D+KP+N L+
Sbjct: 116 SRIEYIHSK-NFIHRDVKPDNFLM 138

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 75  NNRYRVTRKLGWGHFSTVWF-----TGSKTQV---LVSPQFPETALDEIKLLKCVRDGDV 126
            NRYR+ RK+G G F  ++       G +  +    V  + P+  + E K+ K ++ G V
Sbjct: 6   GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMMQ-GGV 63
Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
             P            + CG  G +  MV E+LG +L  L      R   L+ V  +  Q+
Sbjct: 64  GIP----------TIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQM 112
Query: 187 LQGLNYLHTKCRIIHTDIKPENVLL 211
           +  + Y+H+K   IH D+KP+N L+
Sbjct: 113 ISRIEYIHSK-NFIHRDVKPDNFLM 136

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 28/153 (18%)
Query: 72  MLFNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQF-------PETALDEIKLLK 119
            +F++RY+  R LG G F  V       TG +  V V  +         E+ L E++LLK
Sbjct: 22  AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV-LGHNLLKLIVKSKYRGIPLEN 178
                 ++ P   ++ +  +D         +  +V EV  G  L   I+ S+ R   ++ 
Sbjct: 82  -----QLDHPNIXKLYEFFED-------KGYFYLVGEVYTGGELFDEII-SRKRFSEVDA 128
Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            R IIRQ+L G+ Y H K +I+H D+KPEN+LL
Sbjct: 129 AR-IIRQVLSGITYXH-KNKIVHRDLKPENLLL 159

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 28/152 (18%)
Query: 73  LFNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQF-------PETALDEIKLLKC 120
           +F++RY+  R LG G F  V       TG +  V V  +         E+ L E++LLK 
Sbjct: 29  IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK- 87
Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV-LGHNLLKLIVKSKYRGIPLENV 179
                ++ P    +++L + F+  G    +  +V EV  G  L   I+ S+ R   ++  
Sbjct: 88  ----QLDHP---NIMKLYEFFEDKG----YFYLVGEVYTGGELFDEII-SRKRFSEVDAA 135
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           R IIRQ+L G+ Y+H K +I+H D+KPEN+LL
Sbjct: 136 R-IIRQVLSGITYMH-KNKIVHRDLKPENLLL 165

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E++ G  L   + + +   +  E   S I+QIL G+NYLHTK +I H D+K
Sbjct: 86  NRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK-KIAHFDLK 142
Query: 206 PENVLLC 212
           PEN++L 
Sbjct: 143 PENIMLL 149

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E++ G  L   + + +   +  E   S I+QIL G+NYLHTK +I H D+K
Sbjct: 86  NRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK-KIAHFDLK 142
Query: 206 PENVLL 211
           PEN++L
Sbjct: 143 PENIML 148

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E++ G  L   + + +   +  E   S I+QIL G+NYLHTK +I H D+K
Sbjct: 86  NRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK-KIAHFDLK 142
Query: 206 PENVLLC 212
           PEN++L 
Sbjct: 143 PENIMLL 149

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E++ G  L   + + +   +  E   S I+QIL G+NYLHTK +I H D+K
Sbjct: 86  NRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK-KIAHFDLK 142
Query: 206 PENVLLC 212
           PEN++L 
Sbjct: 143 PENIMLL 149

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E++ G  L   + + +   +  E   S I+QIL G+NYLHTK +I H D+K
Sbjct: 86  NRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK-KIAHFDLK 142
Query: 206 PENVLLC 212
           PEN++L 
Sbjct: 143 PENIMLL 149

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E++ G  L   + + +   +  E   S I+QIL G+NYLHTK +I H D+K
Sbjct: 86  NRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK-KIAHFDLK 142
Query: 206 PENVLLC 212
           PEN++L 
Sbjct: 143 PENIMLL 149

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 25/147 (17%)
Query: 76  NRYRVTRKLGWGHFSTVWFTGSKT--QVLVSPQFPET---------ALDEIKLLKCVRDG 124
            +Y    K+G G +  V+   ++   Q++   +F E+         AL EI++LK ++  
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
           ++        V LL+ F+        + +VFE   H +L  + + + RG+P   V+SI  
Sbjct: 63  NL--------VNLLEVFR----RKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITW 109
Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           Q LQ +N+ H K   IH D+KPEN+L+
Sbjct: 110 QTLQAVNFCH-KHNCIHRDVKPENILI 135

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 31/157 (19%)
Query: 76  NRYRVTRKLGWGHFSTVWF-----TGSKT---QVLVSPQ---FPETALDEIKLLKCVRDG 124
           ++Y    K+G G F  V+      TG K    +VL+  +   FP TAL EIK+L+ ++  
Sbjct: 18  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-- 75
Query: 125 DVNDPYRERVVQLLDDFKICGVNGT-------HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
                  E VV L++   IC    +        + +VF+   H+L  L+     +   L 
Sbjct: 76  ------HENVVNLIE---ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLS 125
Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            ++ +++ +L GL Y+H + +I+H D+K  NVL+  D
Sbjct: 126 EIKRVMQMLLNGLYYIH-RNKILHRDMKAANVLITRD 161

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 27/154 (17%)
Query: 72  MLFNNRYRVTRKLGWGHFSTVWFTGSKTQ-VLVSPQ---------FPETALDEIKLLKCV 121
           M  +++++   KLG G ++TV+   +KT  V V+ +          P TA+ EI L+K +
Sbjct: 1   MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI----VKSKYRGIPLE 177
           +         E +V+L D           + +VFE + ++L K +    V +  RG+ L 
Sbjct: 61  K--------HENIVRLYDVIH----TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELN 108
Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            V+    Q+LQGL + H + +I+H D+KP+N+L+
Sbjct: 109 LVKYFQWQLLQGLAFCH-ENKILHRDLKPQNLLI 141

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 31/157 (19%)
Query: 76  NRYRVTRKLGWGHFSTVWF-----TGSKT---QVLVSPQ---FPETALDEIKLLKCVRDG 124
           ++Y    K+G G F  V+      TG K    +VL+  +   FP TAL EIK+L+ ++  
Sbjct: 18  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-- 75
Query: 125 DVNDPYRERVVQLLDDFKICGVNGT-------HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
                  E VV L++   IC    +        + +VF+   H+L  L+     +   L 
Sbjct: 76  ------HENVVNLIE---ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-FTLS 125
Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            ++ +++ +L GL Y+H + +I+H D+K  NVL+  D
Sbjct: 126 EIKRVMQMLLNGLYYIH-RNKILHRDMKAANVLITRD 161

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 31/157 (19%)
Query: 76  NRYRVTRKLGWGHFSTVWF-----TGSKT---QVLVSPQ---FPETALDEIKLLKCVRDG 124
           ++Y    K+G G F  V+      TG K    +VL+  +   FP TAL EIK+L+ ++  
Sbjct: 18  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-- 75
Query: 125 DVNDPYRERVVQLLDDFKICGVNGT-------HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
                  E VV L++   IC    +        + +VF+   H+L  L+     +   L 
Sbjct: 76  ------HENVVNLIE---ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLS 125
Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            ++ +++ +L GL Y+H + +I+H D+K  NVL+  D
Sbjct: 126 EIKRVMQMLLNGLYYIH-RNKILHRDMKAANVLITRD 161

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 31/157 (19%)
Query: 76  NRYRVTRKLGWGHFSTVWF-----TGSKT---QVLVSPQ---FPETALDEIKLLKCVRDG 124
           ++Y    K+G G F  V+      TG K    +VL+  +   FP TAL EIK+L+ ++  
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-- 74
Query: 125 DVNDPYRERVVQLLDDFKICGVNGT-------HVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
                  E VV L++   IC    +        + +VF+   H+L  L+     +   L 
Sbjct: 75  ------HENVVNLIE---ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLS 124
Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            ++ +++ +L GL Y+H + +I+H D+K  NVL+  D
Sbjct: 125 EIKRVMQMLLNGLYYIH-RNKILHRDMKAANVLITRD 160

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 28/149 (18%)
Query: 77  RYRVTRKLGWGHFSTVWFTGSKT--QVLVSPQFP------------ETALDEIKLLKCVR 122
           RY     LG G F+TV+    K   Q++   +               TAL EIKLL+   
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ--- 67
Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSI 182
             +++ P    ++ LLD F     + +++ +VF+ +  +L ++I+K     +   ++++ 
Sbjct: 68  --ELSHP---NIIGLLDAFG----HKSNISLVFDFMETDL-EVIIKDNSLVLTPSHIKAY 117
Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +   LQGL YLH    I+H D+KP N+LL
Sbjct: 118 MLMTLQGLEYLHQHW-ILHRDLKPNNLLL 145

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 30/152 (19%)
Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQFPETA-------LDEIKLLKCV 121
            ++RY+  +KLG G +  V       TG++  + +  +   T        LDE+ +LK  
Sbjct: 2   LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK-- 59
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL--GHNLLKLIVKSKYRGIPLENV 179
               ++ P   ++ +  +D +       +  +V EV   G    ++I++ K+  +   + 
Sbjct: 60  ---QLDHPNIMKLYEFFEDKR-------NYYLVMEVYRGGELFDEIILRQKFSEV---DA 106
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             I++Q+L G  YLH K  I+H D+KPEN+LL
Sbjct: 107 AVIMKQVLSGTTYLH-KHNIVHRDLKPENLLL 137

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 27/147 (18%)
Query: 84  LGWGHFSTVWFTGSKTQ--------VLVSPQFPETALD-EIKLLKCVRDGDVNDPYRERV 134
           LG G FS V+    +          +  SP F +++L+ EI +LK ++         E +
Sbjct: 17  LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK--------HENI 68
Query: 135 VQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRS-IIRQILQGLNY 192
           V L D ++    + TH  +V +++ G  L   I++   RG+  E   S +I+Q+L  + Y
Sbjct: 69  VTLEDIYE----STTHYYLVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKY 121
Query: 193 LHTKCRIIHTDIKPENVLLCVDEARVK 219
           LH    I+H D+KPEN+L    E   K
Sbjct: 122 LHEN-GIVHRDLKPENLLYLTPEENSK 147

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 72  MLFNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQFPETALDEIKLLKCVRDGDV 126
           +LF + Y +   +G G FS V       TG +  V +      T+   +      R+  +
Sbjct: 20  VLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 79
Query: 127 NDPYRE-RVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRG-IPLENVRS-I 182
               +   +V+LL+ +   G+    + MVFE + G +L   IVK    G +  E V S  
Sbjct: 80  CHMLKHPHIVELLETYSSDGM----LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
           +RQIL+ L Y H    IIH D+KPENVLL   E
Sbjct: 136 MRQILEALRYCHDN-NIIHRDVKPENVLLASKE 167

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 30/152 (19%)
Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQFPETA-------LDEIKLLKCV 121
            ++RY+  +KLG G +  V       TG++  + +  +   T        LDE+ +LK  
Sbjct: 19  LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK-- 76
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL--GHNLLKLIVKSKYRGIPLENV 179
               ++ P   ++ +  +D +       +  +V EV   G    ++I++ K+  +   + 
Sbjct: 77  ---QLDHPNIMKLYEFFEDKR-------NYYLVMEVYRGGELFDEIILRQKFSEV---DA 123
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             I++Q+L G  YLH K  I+H D+KPEN+LL
Sbjct: 124 AVIMKQVLSGTTYLH-KHNIVHRDLKPENLLL 154

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 134 VVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
           ++ L D F+    N T V ++ E++ G  L   + + +   +  +     ++QIL G++Y
Sbjct: 91  IITLHDIFE----NKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHY 144
Query: 193 LHTKCRIIHTDIKPENVLLC 212
           LH+K RI H D+KPEN++L 
Sbjct: 145 LHSK-RIAHFDLKPENIMLL 163

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 134 VVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
           ++ L D F+    N T V ++ E++ G  L   + + +   +  +     ++QIL G++Y
Sbjct: 77  IITLHDIFE----NKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHY 130
Query: 193 LHTKCRIIHTDIKPENVLLC 212
           LH+K RI H D+KPEN++L 
Sbjct: 131 LHSK-RIAHFDLKPENIMLL 149

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 134 VVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
           ++ L D F+    N T V ++ E++ G  L   + + +   +  +     ++QIL G++Y
Sbjct: 70  IITLHDIFE----NKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHY 123
Query: 193 LHTKCRIIHTDIKPENVLLC 212
           LH+K RI H D+KPEN++L 
Sbjct: 124 LHSK-RIAHFDLKPENIMLL 142

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 27/151 (17%)
Query: 78  YRVTRKLGWGHFSTV-----WFTGSKTQV------LVSPQFPETALDEIKLLKCVRDGDV 126
           YR  + +G G +  V       TG+K  +        S  F + A  E++LLK +R    
Sbjct: 27  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR---- 82
Query: 127 NDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
                E V+ LLD F       + T   +V   +G +L KL+   K+  +  + ++ ++ 
Sbjct: 83  ----HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM---KHEKLGEDRIQFLVY 135
Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
           Q+L+GL Y+H    IIH D+KP N  L V+E
Sbjct: 136 QMLKGLRYIHA-AGIIHRDLKPGN--LAVNE 163

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 70  IGMLFNNRYRVTRKLGWGHFSTVWF---TGSKTQVLVSPQFPETALDEIKLLKCVRD-GD 125
           IG + N RY++  KLG G  STV+    T    +V +   F      E  L +  R+  +
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVC--MVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
            +    + +V ++D      V+    C  +V E +    L   ++S +  + ++   +  
Sbjct: 65  SSQLSHQNIVSMID------VDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFT 117
Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLL 211
            QIL G+ + H   RI+H DIKP+N+L+
Sbjct: 118 NQILDGIKHAH-DMRIVHRDIKPQNILI 144

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 75  NNRYRVTRKLGWGHFSTVWFTGSK-TQVLVSPQFPETALDE--------IKLLKCVRDGD 125
           N  + +  +LG G F  V+   +K T  L + +  ET  +E        I++L       
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEIL-----AT 72
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
            + PY   +V+LL  +   G     + ++ E      +  I+    RG+    ++ + RQ
Sbjct: 73  CDHPY---IVKLLGAYYHDG----KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125
Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +L+ LN+LH+K RIIH D+K  NVL+ ++
Sbjct: 126 MLEALNFLHSK-RIIHRDLKAGNVLMTLE 153

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 76  NRYRVTRKLGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERV 134
           N++R+ RK+G G F  ++  T  +T   V+ +         +LL           Y  ++
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL-----------YESKI 55
Query: 135 VQLLD------DFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
            ++L       + +  GV G +  +V ++LG +L  L      R + L+ V  +  Q++ 
Sbjct: 56  YRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMIN 114
Query: 189 GLNYLHTKCRIIHTDIKPENVLLCV 213
            + ++H+K   +H DIKP+N L+ +
Sbjct: 115 RVEFVHSKS-FLHRDIKPDNFLMGL 138

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 14/103 (13%)
Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKY 171
           E++LLK ++         E V+ LLD F       + + V +V  ++G +L  ++   K 
Sbjct: 77  ELRLLKHLK--------HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KS 125
Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           + +  E+V+ ++ Q+L+GL Y+H+   IIH D+KP NV +  D
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNED 167

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 26/150 (17%)
Query: 75  NNRYRVTRKLGWGHFSTVWFTGSKTQVLVS---------PQFPETALD-EIKLLKCVRDG 124
           ++ +   RKLG G F  V     ++  L            Q P   ++ EI++LK +   
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL--- 77
Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLEN--VRS 181
             + P   ++ ++ +D+        ++ +V E   G  LL+ IV ++ RG  L    V  
Sbjct: 78  --DHPNIIKIFEVFEDYH-------NMYIVMETCEGGELLERIVSAQARGKALSEGYVAE 128
Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +++Q++  L Y H++  ++H D+KPEN+L 
Sbjct: 129 LMKQMMNALAYFHSQ-HVVHKDLKPENILF 157

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 83  KLGWGHFSTVWFTGSK-TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF 141
           KLG G ++TV+   SK T  LV       AL EI+L     +G      RE  V LL D 
Sbjct: 9   KLGEGTYATVYKGKSKLTDNLV-------ALKEIRLEH--EEGAPCTAIRE--VSLLKDL 57
Query: 142 KICGVNGTH--------VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           K   +   H        + +VFE L  +L K  +      I + NV+  + Q+L+GL Y 
Sbjct: 58  KHANIVTLHDIIHTEKSLTLVFEYLDKDL-KQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 194 HTKCRIIHTDIKPENVLL 211
           H + +++H D+KP+N+L+
Sbjct: 117 H-RQKVLHRDLKPQNLLI 133

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 18/115 (15%)
Query: 103 VSPQFP-ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHN 161
           + P+ P E    EI +LK      ++ P   ++V++LDD      N  H+ MVFE++   
Sbjct: 74  IQPRGPIEQVYQEIAILK-----KLDHPNVVKLVEVLDD-----PNEDHLYMVFELVNQG 123
Query: 162 LLKLIVKSKYRGIPL--ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            +  +   K    PL  +  R   + +++G+ YLH + +IIH DIKP N+L+  D
Sbjct: 124 PVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGED 173

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 75  NNRYRVTRKLGWGHFSTVWFTGSK-TQVLVSPQFPETALDE--------IKLLKCVRDGD 125
           N  + +  +LG G F  V+   +K T  L + +  ET  +E        I++L       
Sbjct: 10  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEIL-----AT 64
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
            + PY   +V+LL  +   G     + ++ E      +  I+    RG+    ++ + RQ
Sbjct: 65  CDHPY---IVKLLGAYYHDG----KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 117
Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +L+ LN+LH+K RIIH D+K  NVL+ ++
Sbjct: 118 MLEALNFLHSK-RIIHRDLKAGNVLMTLE 145

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP 206
            G  V +  E+L    L  ++K +   +P +     + Q L+GL YLHT+ RI+H D+K 
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKA 192
Query: 207 ENVLLCVDEARV 218
           +NVLL  D +R 
Sbjct: 193 DNVLLSSDGSRA 204

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 25/151 (16%)
Query: 74  FNNRYRVTRK-LGWGHFSTVWFTGSK-TQVLVSPQFPE----------TALDEIKLLKCV 121
           FNN Y +T K LG G F+ V    SK T    + +F +            L EI +L+  
Sbjct: 26  FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA 85
Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVR 180
           +          RV+ L + ++    N + + ++ E   G  +  L +      +   +V 
Sbjct: 86  KSCP-------RVINLHEVYE----NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI 134
Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +I+QIL+G+ YLH +  I+H D+KP+N+LL
Sbjct: 135 RLIKQILEGVYYLH-QNNIVHLDLKPQNILL 164

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 31/152 (20%)
Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSKTQVLVSPQFP------ETALDEIKLLKCVR 122
           F  RY +   LG G F  V       T  +  V V  +         T L E++LLK   
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK--- 76
Query: 123 DGDVNDPYRERVVQLLDD---FKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV 179
              ++ P   ++ ++L+D   F I G   T         G  L   I+K K       + 
Sbjct: 77  --KLDHPNIMKLFEILEDSSSFYIVGELYT---------GGELFDEIIKRKR--FSEHDA 123
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             II+Q+  G+ Y+H K  I+H D+KPEN+LL
Sbjct: 124 ARIIKQVFSGITYMH-KHNIVHRDLKPENILL 154

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 83  KLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRER------VVQ 136
           ++G G F TV + G  T+  V   + E  L + KL K  R     +    +      +V+
Sbjct: 33  EIGRGSFKTV-YKGLDTETTVEVAWCE--LQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 137 LLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTK 196
             D ++        + +V E+     LK  +K +++   ++ +RS  RQIL+GL +LHT+
Sbjct: 90  FYDSWESTVKGKKCIVLVTELXTSGTLKTYLK-RFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 197 C-RIIHTDIKPENVLLCVDEARVK 219
              IIH D+K +N+ +      VK
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVK 172

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 14/103 (13%)
Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKY 171
           E++LLK ++         E V+ LLD F       + + V +V  ++G +L  ++   K 
Sbjct: 77  ELRLLKHLK--------HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KC 125
Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           + +  E+V+ ++ Q+L+GL Y+H+   IIH D+KP NV +  D
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNED 167

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRSIIRQILQGLNYLHTKCRIIHTD 203
           +  T + ++ E LG      ++K      PLE   + +I+R+IL+GL+YLH++ R IH D
Sbjct: 87  LKSTKLWIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE-RKIHRD 141
Query: 204 IKPENVLLC 212
           IK  NVLL 
Sbjct: 142 IKAANVLLS 150

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP 206
            G  V +  E+L    L  ++K +   +P +     + Q L+GL YLHT+ RI+H D+K 
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKA 178
Query: 207 ENVLLCVDEARV 218
           +NVLL  D +R 
Sbjct: 179 DNVLLSSDGSRA 190

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 21/156 (13%)
Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVN-----DPY 130
           N YR+ R L  G F+ +       +     ++ ++ L++ +      +  ++     D +
Sbjct: 31  NDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 131 RERVVQLLDDFK-----ICG---VNGTHVCMVFEVLGHN-LLKL-----IVKSKYR-GIP 175
           +  + Q++ D K      C     N   V +++E + ++ +LK      ++   Y   IP
Sbjct: 91  KNEL-QIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           ++ ++ II+ +L   +Y+H +  I H D+KP N+L+
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 78  YRVTRKLGWGHFSTV-----WFTGSKTQVLV--SPQFPETALDEIKLLKCVRDGDV-NDP 129
           YR+ + +G G+F+ V       TG +  + +    Q   T+L   KL + VR   + N P
Sbjct: 14  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ--KLFREVRIMKILNHP 71
Query: 130 YRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQG 189
              ++ ++++  K       ++ M +   G     L+   + +    +  RS  RQI+  
Sbjct: 72  NIVKLFEVIETEKTL-----YLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSA 123
Query: 190 LNYLHTKCRIIHTDIKPENVLLCVDEARVKXXXXXXXXXXXXGHKLPVSFCSTAP 244
           + Y H K RI+H D+K EN+LL  D   +K            G KL  +FC + P
Sbjct: 124 VQYCHQK-RIVHRDLKAENLLLDAD-MNIKIADFGFSNEFTVGGKLD-TFCGSPP 175

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 151 VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
           V +V +++  +L ++I  S+   + LE+VR  + Q+L+GL Y+H+  ++IH D+KP N+L
Sbjct: 134 VYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLL 190
Query: 211 L 211
           +
Sbjct: 191 V 191

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 151 VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
           V +V +++  +L ++I  S+   + LE+VR  + Q+L+GL Y+H+  ++IH D+KP N+L
Sbjct: 135 VYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLL 191
Query: 211 L 211
           +
Sbjct: 192 V 192

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP 206
            G  V +  E+L    L  ++K +   +P +     + Q L+GL YLHT+ RI+H D+K 
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKA 194
Query: 207 ENVLLCVDEARV 218
           +NVLL  D +R 
Sbjct: 195 DNVLLSSDGSRA 206

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 14/103 (13%)
Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKY 171
           E++LLK ++         E V+ LLD F       + + V +V  ++G +L  ++   K 
Sbjct: 69  ELRLLKHLK--------HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KC 117
Query: 172 RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           + +  E+V+ ++ Q+L+GL Y+H+   IIH D+KP NV +  D
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNED 159

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 84  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 140
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 141 PENIMLLDRNVPKPRIK 157

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 84  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 140
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 141 PENIMLLDRNVPKPRIK 157

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 28/145 (19%)
Query: 78  YRVTRKLGWGHFSTVWFTGSKT--QVLVSPQFPETAL--------DEIKLLKCVRDGDVN 127
           +     LG G FS V     K   ++      P+ AL        +EI +L+ ++     
Sbjct: 24  FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK----- 78
Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLE-NVRSIIRQ 185
               E +V L D ++    +  H+ +V +++ G  L   IV+   +G   E +  ++IRQ
Sbjct: 79  ---HENIVALEDIYE----SPNHLYLVMQLVSGGELFDRIVE---KGFYTEKDASTLIRQ 128
Query: 186 ILQGLNYLHTKCRIIHTDIKPENVL 210
           +L  + YLH +  I+H D+KPEN+L
Sbjct: 129 VLDAVYYLH-RMGIVHRDLKPENLL 152

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 84  LGWGHFSTVWFTGSKTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLL 138
           LG+G   TV F GS     V+ +     F + AL EIKLL      D  +  R    +  
Sbjct: 41  LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLL--TESDDHPNVIRYYCSETT 98
Query: 139 DDF-----KICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           D F     ++C +N   +     V   NL    ++ +Y  I      S++RQI  G+ +L
Sbjct: 99  DRFLYIALELCNLNLQDLVESKNVSDENL---KLQKEYNPI------SLLRQIASGVAHL 149
Query: 194 HTKCRIIHTDIKPENVLLCV 213
           H+  +IIH D+KP+N+L+  
Sbjct: 150 HS-LKIIHRDLKPQNILVST 168

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 57  PNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW----FTGSKTQV--LVSPQFPET 110
           P +Y     H V+ G    + Y++ RKLG G +S V+     T ++  V  ++ P     
Sbjct: 20  PREYWDYASHVVEWGN--QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK 77
Query: 111 ALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSK 170
              EIK+L+ +R G         ++ L D  K   V+ T   +VFE + +   K +    
Sbjct: 78  IKREIKILENLRGG-------PNIITLADIVK-DPVSRT-PALVFEHVNNTDFKQL---- 124
Query: 171 YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           Y+ +   ++R  + +IL+ L+Y H+   I+H D+KP NV++
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI 164

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 84  LGWGHFSTVWFTGSKTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLL 138
           LG+G   TV F GS     V+ +     F + AL EIKLL      D  +  R    +  
Sbjct: 41  LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLL--TESDDHPNVIRYYCSETT 98
Query: 139 DDF-----KICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           D F     ++C +N   +     V   NL    ++ +Y  I      S++RQI  G+ +L
Sbjct: 99  DRFLYIALELCNLNLQDLVESKNVSDENL---KLQKEYNPI------SLLRQIASGVAHL 149
Query: 194 HTKCRIIHTDIKPENVLLCV 213
           H+  +IIH D+KP+N+L+  
Sbjct: 150 HS-LKIIHRDLKPQNILVST 168

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 31/152 (20%)
Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSKTQVLVSPQFP------ETALDEIKLLKCVR 122
           F  RY +   LG G F  V       T  +  V V  +         T L E++LLK   
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK--- 76
Query: 123 DGDVNDPYRERVVQLLDD---FKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV 179
              ++ P   ++ ++L+D   F I G   T         G  L   I+K K       + 
Sbjct: 77  --KLDHPNIMKLFEILEDSSSFYIVGELYT---------GGELFDEIIKRK--RFSEHDA 123
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             II+Q+  G+ Y+H K  I+H D+KPEN+LL
Sbjct: 124 ARIIKQVFSGITYMH-KHNIVHRDLKPENILL 154

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 26/152 (17%)
Query: 76  NRYRVTRKLGWGHFSTVW-FTGSKTQVLVSPQ----------FPETALDEIKLLKCVRDG 124
           +RYR   KLG G +  V+    + T   V+ +           P TA+ E+ LLK ++  
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
           ++ +             K    +   + ++FE   ++L K + K+    + +  ++S + 
Sbjct: 94  NIIE------------LKSVIHHNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLY 139
Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
           Q++ G+N+ H++ R +H D+KP+N+LL V +A
Sbjct: 140 QLINGVNFCHSR-RCLHRDLKPQNLLLSVSDA 170

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 78  YRVTRKLGWGHFSTV-----WFTGSKTQVLV--SPQFPETALDEIKLLKCVRDGDV-NDP 129
           YR+ + +G G+F+ V       TG +  + +    Q   T+L   KL + VR   + N P
Sbjct: 17  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ--KLFREVRIMKILNHP 74
Query: 130 YRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQG 189
              ++ ++++  K       ++ M +   G     L+   + +    +  RS  RQI+  
Sbjct: 75  NIVKLFEVIETEKTL-----YLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSA 126
Query: 190 LNYLHTKCRIIHTDIKPENVLLCVDEARVKXXXXXXXXXXXXGHKLPVSFCSTAP 244
           + Y H K RI+H D+K EN+LL  D   +K            G KL  +FC   P
Sbjct: 127 VQYCHQK-RIVHRDLKAENLLLDAD-MNIKIADFGFSNEFTVGGKLD-AFCGAPP 178

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 31/152 (20%)
Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSKTQVLVSPQFP------ETALDEIKLLKCVR 122
           F  RY +   LG G F  V       T  +  V V  +         T L E++LLK   
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK--- 76
Query: 123 DGDVNDPYRERVVQLLDD---FKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV 179
              ++ P   ++ ++L+D   F I G   T         G  L   I+K K       + 
Sbjct: 77  --KLDHPNIMKLFEILEDSSSFYIVGELYT---------GGELFDEIIKRK--RFSEHDA 123
Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             II+Q+  G+ Y+H K  I+H D+KPEN+LL
Sbjct: 124 ARIIKQVFSGITYMH-KHNIVHRDLKPENILL 154

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 84  LGWGHFSTVWFTGSKTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLL 138
           LG+G   TV F GS     V+ +     F + AL EIKLL      D  +  R    +  
Sbjct: 23  LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLL--TESDDHPNVIRYYCSETT 80
Query: 139 DDF-----KICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           D F     ++C +N   +     V   NL    ++ +Y  I      S++RQI  G+ +L
Sbjct: 81  DRFLYIALELCNLNLQDLVESKNVSDENL---KLQKEYNPI------SLLRQIASGVAHL 131
Query: 194 HTKCRIIHTDIKPENVLLCV 213
           H+  +IIH D+KP+N+L+  
Sbjct: 132 HS-LKIIHRDLKPQNILVST 150

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 84  LGWGHFSTVWFTGSKTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLL 138
           LG+G   TV F GS     V+ +     F + AL EIKLL      D  +  R    +  
Sbjct: 23  LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLL--TESDDHPNVIRYYCSETT 80
Query: 139 DDF-----KICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           D F     ++C +N   +     V   NL    ++ +Y  I      S++RQI  G+ +L
Sbjct: 81  DRFLYIALELCNLNLQDLVESKNVSDENL---KLQKEYNPI------SLLRQIASGVAHL 131
Query: 194 HTKCRIIHTDIKPENVLLCV 213
           H+  +IIH D+KP+N+L+  
Sbjct: 132 HS-LKIIHRDLKPQNILVST 150

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           N T V ++ E V G  L   + + +   +  E     ++QIL G+ YLH+  +I H D+K
Sbjct: 85  NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLK 141
Query: 206 PENVLLC---VDEARVK 219
           PEN++L    V + R+K
Sbjct: 142 PENIMLLDRNVPKPRIK 158

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 28/153 (18%)
Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQ----------FPETALDEIKLLKCVRDGD 125
            +Y+   K+G G +  V+        +V+ +           P TA+ EI LLK      
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLK------ 74
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCM--VFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
             + +   +V L+D      V  +  C+  VFE +  +L K++ ++K  G+    ++  +
Sbjct: 75  --ELHHPNIVSLID------VIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYL 125
Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            Q+L+G+ + H + RI+H D+KP+N+L+  D A
Sbjct: 126 YQLLRGVAHCH-QHRILHRDLKPQNLLINSDGA 157

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 28/153 (18%)
Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQ----------FPETALDEIKLLKCVRDGD 125
            +Y+   K+G G +  V+        +V+ +           P TA+ EI LLK      
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLK------ 74
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCM--VFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
             + +   +V L+D      V  +  C+  VFE +  +L K++ ++K  G+    ++  +
Sbjct: 75  --ELHHPNIVSLID------VIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYL 125
Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA 216
            Q+L+G+ + H + RI+H D+KP+N+L+  D A
Sbjct: 126 YQLLRGVAHCH-QHRILHRDLKPQNLLINSDGA 157

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 41/173 (23%)
Query: 63  GGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKT-------QVLVSPQFP------- 108
           G Y   K G +  + ++V RKLG G +  V     K        +V+   QF        
Sbjct: 24  GMYVRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDD 82
Query: 109 --------ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-- 158
                   E   +EI LLK +     + P    +++L D F+    +  +  +V E    
Sbjct: 83  NKNIEKFHEEIYNEISLLKSL-----DHP---NIIKLFDVFE----DKKYFYLVTEFYEG 130
Query: 159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           G    ++I + K+      N   I++QIL G+ YLH K  I+H DIKPEN+LL
Sbjct: 131 GELFEQIINRHKFDECDAAN---IMKQILSGICYLH-KHNIVHRDIKPENILL 179

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 78  YRVTRKLGWGHFSTVWF-----TGSKT-------QVLVSPQFPETALDEIKLLKCVRDGD 125
           Y++ + LG G F  V       TG K        +VL           EI  L+ +R   
Sbjct: 16  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR--- 72
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   +++L D  K    +   + MV E  G+ L   IV+     +  +  R   +Q
Sbjct: 73  -----HPHIIKLYDVIK----SKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQ 121
Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
           I+  + Y H + +I+H D+KPEN+LL
Sbjct: 122 IISAVEYCH-RHKIVHRDLKPENLLL 146

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 78  YRVTRKLGWGHFSTVWF-----TGSKT-------QVLVSPQFPETALDEIKLLKCVRDGD 125
           Y++ + LG G F  V       TG K        +VL           EI  L+ +R   
Sbjct: 15  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR--- 71
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   +++L D  K    +   + MV E  G+ L   IV+     +  +  R   +Q
Sbjct: 72  -----HPHIIKLYDVIK----SKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQ 120
Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
           I+  + Y H + +I+H D+KPEN+LL
Sbjct: 121 IISAVEYCH-RHKIVHRDLKPENLLL 145

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 78  YRVTRKLGWGHFSTVWF-----TGSKT-------QVLVSPQFPETALDEIKLLKCVRDGD 125
           Y++ + LG G F  V       TG K        +VL           EI  L+ +R   
Sbjct: 10  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR--- 66
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   +++L D  K    +   + MV E  G+ L   IV+     +  +  R   +Q
Sbjct: 67  -----HPHIIKLYDVIK----SKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQ 115
Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
           I+  + Y H + +I+H D+KPEN+LL
Sbjct: 116 IISAVEYCH-RHKIVHRDLKPENLLL 140

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 78  YRVTRKLGWGHFSTVWF-TGSKTQVLVSPQFPETAL-----------DEIKLLKCVRDGD 125
           Y +   LG G F  V   T  KTQ  V+ +F    L            EI  LK +R   
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR--- 67
Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   +++L D         T + MV E  G  L   IV+ K   +  +  R   +Q
Sbjct: 68  -----HPHIIKLYD----VITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQ 116
Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
           I+  + Y H + +I+H D+KPEN+LL
Sbjct: 117 IICAIEYCH-RHKIVHRDLKPENLLL 141

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	284
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-77
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	9e-64
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	7e-45
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	6e-38
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-37
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-37
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-35
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-21
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-21
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-20
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-20
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-19
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-19
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-19
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-19
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-19
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-19
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-19
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-18
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-18
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-18
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-18
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	7e-18
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-17
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-17
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-17
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-16
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-15
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-15
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-15
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-15
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-15
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-15
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-15
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-15
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	7e-15
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-14
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-14
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-14
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-14
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-14
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-14
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-14
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-14
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-14
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-14
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	9e-14
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	9e-14
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-13
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-13
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-13
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-13
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-13
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-13
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-13
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-13
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-13
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-13
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	9e-13
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-12
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-12
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-12
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-12
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-12
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-12
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-12
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-12
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-12
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-12
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-12
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-12
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-12
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-12
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-12
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-12
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	5e-12
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-12
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	7e-12
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-12
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	8e-12
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	9e-12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-12
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	9e-12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-11
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-11
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-11
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-11
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-11
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-11
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-11
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-11
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-11
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	6e-11
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-11
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-11
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	9e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-10
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-10
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-10
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-10
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-10
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-09
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-09
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	8e-09
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-08
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-08
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-08
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-07
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-07
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-07
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-06
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	4e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	7e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	9e-06
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-05
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-05
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-05
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	6e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	8e-04
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	8e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	9e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	9e-04

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  239 bits (611), Expect = 3e-77
 Identities = 130/197 (65%), Positives = 150/197 (76%), Gaps = 8/197 (4%)

Query: 48  SSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWF---TGSKTQVLV- 103
            SD+DEQEDPNDYCKGGYH VKIG LFN RY V RKLGWGHFSTVW       K  V + 
Sbjct: 9   GSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK 68

Query: 104 ----SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLG 159
               +  + ETALDEI+LLK VR+ D NDP RE VVQLLDDFKI GVNGTH+CMVFEVLG
Sbjct: 69  VVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLG 128

Query: 160 HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           H+LLK I+KS Y+G+PL  V+ II+Q+LQGL+YLHTKCRIIHTDIKPEN+LL V+E  ++
Sbjct: 129 HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 188

Query: 220 TLALNATELAATGHKLP 236
            LA  ATE   +G   P
Sbjct: 189 RLAAEATEWQRSGAPPP 205

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  203 bits (519), Expect = 9e-64
 Identities = 82/169 (48%), Positives = 100/169 (59%), Gaps = 12/169 (7%)

Query: 59  DYCKGGYHPVKIG-MLFNNRYRVTRKLGWGHFSTVWF-TGSKTQVLV-------SPQFPE 109
           DY  GGYHP   G    + RY + RKLGWGHFSTVW          V          + E
Sbjct: 1   DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60

Query: 110 TALDEIKLLKCVRDGDVNDPY---RERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            A DEIKLL+ V D D           +++LLD F   G NG HV MVFEVLG NLL LI
Sbjct: 61  AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
            K ++RGIPL  V+ I +Q+L GL+Y+H +C IIHTDIKPENVL+ + +
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD 169

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  154 bits (391), Expect = 7e-45
 Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 26/218 (11%)

Query: 32  LSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFST 91
           +    H     EN  F  D++            +   K GML NN + V RK+G G F  
Sbjct: 1   MHHHHHHSSGRENLYFQGDDEI----------VHFSWKKGMLLNNAFLVIRKMGDGTFGR 50

Query: 92  V---WFTGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI 143
           V       +K    V       ++  +A  E  +LK +++   +D     +V+    F  
Sbjct: 51  VLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQN---DDINNNNIVKYHGKFMY 107

Query: 144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTD 203
                 H+C++FE LG +L ++I ++ Y G  +E+++    +IL+ LNYL  K  + HTD
Sbjct: 108 YD----HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR-KMSLTHTD 162

Query: 204 IKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCS 241
           +KPEN+LL         + +                  
Sbjct: 163 LKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  135 bits (343), Expect = 6e-38
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 16/166 (9%)

Query: 64  GYHPVKIGMLFNNRYRVTRKLGWGHFSTVW--FTGSKTQVLVS-------PQFPETALDE 114
           G+   +IG     RY +   LG G F  V      ++ +  V+        ++ E A  E
Sbjct: 7   GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 66

Query: 115 IKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGI 174
           I +LK +++ D  +  +   V + D F   G    H+C+ FE+LG N  + + ++ ++  
Sbjct: 67  INVLKKIKEKDKEN--KFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPY 120

Query: 175 PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT 220
           PL +VR +  Q+   L +LH + ++ HTD+KPEN+L    E     
Sbjct: 121 PLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVNSEFETLY 165

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  135 bits (341), Expect = 2e-37
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 30/209 (14%)

Query: 17  NYHNKYNN----RYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGM 72
           ++H+ +++      +N Y  S  SH +E         D++             + VK G 
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSMSSHKKERKVYNDGYDDDN-----------YDYIVKNGE 50

Query: 73  LFNNRYRVTRKLGWGHFSTV---WFTGSKTQVLV-----SPQFPETALDEIKLLKCVRDG 124
            + +RY +   +G G F  V   +    +  V +        F   A  E++LL+ +   
Sbjct: 51  KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKH 110

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
           D    Y   +V L   F        H+C+VFE+L +NL  L+  + +RG+ L   R   +
Sbjct: 111 DTEMKYY--IVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 164

Query: 185 QILQGLNYLHT-KCRIIHTDIKPENVLLC 212
           Q+   L +L T +  IIH D+KPEN+LLC
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLC 193

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  134 bits (339), Expect = 2e-37
 Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 16/158 (10%)

Query: 64  GYHPVKIGMLFNNRYRVTRKLGWGHFSTV---WFTGSKTQVLV------SPQFPETALDE 114
            +   + G + + RY +   LG G F  V       +  + +         ++ E A  E
Sbjct: 2   MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE 61

Query: 115 IKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGI 174
           I++L+ +   D N     R VQ+L+ F+  G    H+C+VFE+LG +    I ++ +   
Sbjct: 62  IQVLEHLNTTDPNS--TFRCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPF 115

Query: 175 PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
            L+++R +  QI + +N+LH   ++ HTD+KPEN+L  
Sbjct: 116 RLDHIRKMAYQICKSVNFLH-SNKLTHTDLKPENILFV 152

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  131 bits (331), Expect = 1e-35
 Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 15/157 (9%)

Query: 64  GYHPVKIGMLFNNRYRVTRKLGWGHFSTV---WFTGSKTQVLV-----SPQFPETALDEI 115
           G +          RY V + +G G F  V   +       V +       +F   A +EI
Sbjct: 85  GSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144

Query: 116 KLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIP 175
           ++L+ +R  D ++     V+ +L++F        H+CM FE+L  NL +LI K+K++G  
Sbjct: 145 RILEHLRKQDKDNTMN--VIHMLENFTFRN----HICMTFELLSMNLYELIKKNKFQGFS 198

Query: 176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
           L  VR     ILQ L+ LH K RIIH D+KPEN+LL 
Sbjct: 199 LPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILLK 234

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 90.4 bits (225), Expect = 3e-21
 Identities = 28/155 (18%), Positives = 65/155 (41%), Gaps = 25/155 (16%)

Query: 75  NNRYRVTRKLGWGHFSTVWFTGSKTQVLV----------SPQFPETALDEIKLLKCVRDG 124
              Y + +++G G  S V+   ++ + +             Q  ++  +EI  L  ++  
Sbjct: 27  GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 86

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
                  +++++L D          ++ MV E    +L   + K   + I     +S  +
Sbjct: 87  S------DKIIRLYDYEI----TDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWK 134

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            +L+ ++ +H    I+H+D+KP N L+   +  +K
Sbjct: 135 NMLEAVHTIHQH-GIVHSDLKPANFLI--VDGMLK 166

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 90.3 bits (224), Expect = 8e-21
 Identities = 32/212 (15%), Positives = 82/212 (38%), Gaps = 28/212 (13%)

Query: 18  YHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNR 77
           +H+ +++          +     + E +   S +   +D +         + +       
Sbjct: 1   HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVK---GRI 57

Query: 78  YRVTRKLGWGHFSTVWFTGSKTQVLV----------SPQFPETALDEIKLLKCVRDGDVN 127
           Y + +++G G  S V+   ++ + +             Q  ++  +EI  L  ++     
Sbjct: 58  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-- 115

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
               +++++L D          ++ MV E    +L   + K   + I     +S  + +L
Sbjct: 116 ----DKIIRLYDYEI----TDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNML 165

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           + ++ +H    I+H+D+KP N L+   +  +K
Sbjct: 166 EAVHTIHQH-GIVHSDLKPANFLI--VDGMLK 194

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 88.6 bits (220), Expect = 1e-20
 Identities = 28/155 (18%), Positives = 65/155 (41%), Gaps = 25/155 (16%)

Query: 75  NNRYRVTRKLGWGHFSTVWFTGSKTQVLV----------SPQFPETALDEIKLLKCVRDG 124
              Y + +++G G  S V+   ++ + +             Q  ++  +EI  L  ++  
Sbjct: 8   GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
                  +++++L D          ++ MV E    +L   + K   + I     +S  +
Sbjct: 68  S------DKIIRLYDYEI----TDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWK 115

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            +L+ ++ +H    I+H+D+KP N L+   +  +K
Sbjct: 116 NMLEAVHTIHQH-GIVHSDLKPANFLI--VDGMLK 147

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 87.2 bits (217), Expect = 3e-20
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 25/147 (17%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSK-TQVLV----------SPQFPETALDEIKLLKCVRDG 124
            +Y    K+G G +  V+   ++ T  +V           P   + AL EI++LK     
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLK----- 57

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
            +  P    +V LL+ F+        + +VFE   H +L  +     RG+P   V+SI  
Sbjct: 58  QLKHPN---LVNLLEVFR----RKRRLHLVFEYCDHTVLHEL-DRYQRGVPEHLVKSITW 109

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           Q LQ +N+ H     IH D+KPEN+L+
Sbjct: 110 QTLQAVNFCHKH-NCIHRDVKPENILI 135

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 85.7 bits (213), Expect = 1e-19
 Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 13/105 (12%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            P TA+ EI LLK     ++N P    +V+LLD           + +VFE L  +L K +
Sbjct: 45  VPSTAIREISLLK-----ELNHPN---IVKLLDVI----HTENKLYLVFEFLHQDLKKFM 92

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             S   GIPL  ++S + Q+LQGL + H+  R++H D+KP+N+L+
Sbjct: 93  DASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLI 136

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 85.7 bits (213), Expect = 1e-19
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 104 SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG-THVCMVFEVLGHNL 162
               P + + E+ LL+      +       VV+L+D       +    V +VFE +  +L
Sbjct: 51  GGGLPISTVREVALLR-----RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL 105

Query: 163 LKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
              + K+   G+P E ++ ++RQ L+GL++LH    I+H D+KPEN+L+
Sbjct: 106 RTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILV 153

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 85.7 bits (213), Expect = 1e-19
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 7/106 (6%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG-THVCMVFEVLGHNLLKL 165
            P + + E+ +L+      +       VV+L D   +   +  T + +VFE +  +L   
Sbjct: 54  MPLSTIREVAVLR-----HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY 108

Query: 166 IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           + K    G+P E ++ ++ Q+L+GL++LH+  R++H D+KP+N+L+
Sbjct: 109 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILV 153

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 14/105 (13%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
             + A+ EIKLLK      +       +V LL+  K          +VFE + H +L  +
Sbjct: 67  VKKIAMREIKLLK-----QLRHEN---LVNLLEVCK----KKKRWYLVFEFVDHTILDDL 114

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +    G+  + V+  + QI+ G+ + H+   IIH DIKPEN+L+
Sbjct: 115 -ELFPNGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILV 157

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 85.6 bits (212), Expect = 3e-19
 Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 18/144 (12%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVNDPYR 131
            +     LG G   T+ + G      V      P+    A  E++LL+   D   N    
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRES-DEHPN---- 79

Query: 132 ERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLN 191
             V++     K    +     +  E+    L + + +  +  + LE   ++++Q   GL 
Sbjct: 80  --VIRYFCTEK----DRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLA 132

Query: 192 YLHTKCRIIHTDIKPENVLLCVDE 215
           +LH+   I+H D+KP N+L+ +  
Sbjct: 133 HLHSL-NIVHRDLKPHNILISMPN 155

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 84.3 bits (209), Expect = 4e-19
 Identities = 41/212 (19%), Positives = 73/212 (34%), Gaps = 27/212 (12%)

Query: 19  HNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRY 78
           H+ +++    D  L  E+   +     Q        E        GY P +    F   +
Sbjct: 2   HHHHHHSSGVD--LGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSF 59

Query: 79  RVTRKLGWGHFSTVW-----FTGSK------TQVLVSPQFPETALDEIKLLKCVRDGDVN 127
           +   +LG G +  V+       G              P+     L E+   + V      
Sbjct: 60  QRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV----GQ 115

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
            P     V+L   ++     G  + +  E+ G +L +         +P   V   +R  L
Sbjct: 116 HPC---CVRLEQAWE----EGGILYLQTELCGPSLQQHCEAWGAS-LPEAQVWGYLRDTL 167

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
             L +LH++  ++H D+KP N+ L     R K
Sbjct: 168 LALAHLHSQ-GLVHLDVKPANIFLG-PRGRCK 197

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 85.2 bits (211), Expect = 6e-19
 Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 22/148 (14%)

Query: 74  FNNRYRVTRKLGWGHFSTVWFTGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVND 128
             N     + LG+G   TV F GS     V        F + AL EIKLL    D   N 
Sbjct: 13  LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTES-DDHPN- 70

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLE-----NVRSII 183
                V++              + +  E+   NL  L+         L+     N  S++
Sbjct: 71  -----VIRYYCSET----TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLL 211
           RQI  G+ +LH   +IIH D+KP+N+L+
Sbjct: 122 RQIASGVAHLH-SLKIIHRDLKPQNILV 148

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 82.2 bits (204), Expect = 2e-18
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 14/105 (13%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            P T + EI +LK     ++       +V+L D           + +VFE L  +L KL+
Sbjct: 43  IPSTTIREISILK-----ELKHSN---IVKLYDVI----HTKKRLVLVFEHLDQDLKKLL 90

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                 G+     +S + Q+L G+ Y H + R++H D+KP+N+L+
Sbjct: 91  -DVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLI 133

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 81.8 bits (203), Expect = 2e-18
 Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 14/105 (13%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            P +AL EI LLK     ++       +V+L D       +   + +VFE    +L K  
Sbjct: 44  VPSSALREICLLK-----ELKHKN---IVRLHDVL----HSDKKLTLVFEFCDQDLKKYF 91

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             S    +  E V+S + Q+L+GL + H++  ++H D+KP+N+L+
Sbjct: 92  -DSCNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLI 134

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 81.8 bits (203), Expect = 3e-18
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 14/105 (13%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            P TA+ EI LLK     +++ P    +V L+D       +   + +VFE +  +L K++
Sbjct: 62  IPSTAIREISLLK-----ELHHPN---IVSLIDVI----HSERCLTLVFEFMEKDLKKVL 109

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                 G+    ++  + Q+L+G+ + H   RI+H D+KP+N+L+
Sbjct: 110 -DENKTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLI 152

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 81.5 bits (202), Expect = 4e-18
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 24/146 (16%)

Query: 76  NRYRVTRKLGWGHFSTVW-FTGSKTQVLVSPQ---------FPETALDEIKLLKCVRDGD 125
             Y    KLG G ++TV+      T  LV+ +          P TA+ E+ LLK     D
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLK-----D 56

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
           +       +V L D           + +VFE L  +L + +       I + NV+  + Q
Sbjct: 57  LKHAN---IVTLHDII----HTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQ 108

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
           +L+GL Y H + +++H D+KP+N+L+
Sbjct: 109 LLRGLAYCHRQ-KVLHRDLKPQNLLI 133

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 81.1 bits (201), Expect = 7e-18
 Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 15/105 (14%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            P TA+ E+ LLK     ++       +++L         +   + ++FE   ++L K +
Sbjct: 76  VPGTAIREVSLLK-----ELQHRN---IIELKSVI----HHNHRLHLIFEYAENDLKKYM 123

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
              K   + +  ++S + Q++ G+N+ H++ R +H D+KP+N+LL
Sbjct: 124 --DKNPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLL 165

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 14/105 (13%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
              TAL EIKLL+     +++ P    ++ LLD F     + +++ +VF+ +  +L  +I
Sbjct: 55  INRTALREIKLLQ-----ELSHPN---IIGLLDAF----GHKSNISLVFDFMETDLEVII 102

Query: 167 VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            K     +   ++++ +   LQGL YLH    I+H D+KP N+LL
Sbjct: 103 -KDNSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLL 145

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 79.3 bits (196), Expect = 2e-17
 Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 21/161 (13%)

Query: 63  GGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW-----FTGS----KTQVLVSPQFPETALD 113
             Y    + ++ N  Y   +KLG G FS V        G     K  +    Q  E A  
Sbjct: 16  NLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQR 75

Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV-LGHNLLKLIVKSKYR 172
           E  + +       N P    +++L+              ++        L   I + K +
Sbjct: 76  EADMHR-----LFNHPN---ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDK 127

Query: 173 GIPL--ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           G  L  + +  ++  I +GL  +H K    H D+KP N+LL
Sbjct: 128 GNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILL 167

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 79.2 bits (196), Expect = 3e-17
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 17/109 (15%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
            P TA+ EI L+K     ++       +V+L D           + +VFE + ++L K +
Sbjct: 46  TPSTAIREISLMK-----ELKHEN---IVRLYDVI----HTENKLTLVFEFMDNDLKKYM 93

Query: 167 ----VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
               V +  RG+ L  V+    Q+LQGL + H   +I+H D+KP+N+L+
Sbjct: 94  DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLI 141

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 75.3 bits (186), Expect = 8e-16
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 14/109 (12%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLD----DFKICGVNGTHVCMVFEVLGHNL 162
           FP TAL EIK+L+ ++         E VV L++               + +VF+   H+L
Sbjct: 59  FPITALREIKILQLLKH--------ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL 110

Query: 163 LKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             L+  +      L  ++ +++ +L GL Y+H   +I+H D+K  NVL+
Sbjct: 111 AGLL-SNVLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLI 157

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 45/194 (23%), Positives = 70/194 (36%), Gaps = 57/194 (29%)

Query: 70  IGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDE-------IKLLKCVR 122
           IG + N RY++  KLG G  STV+                 A D        IK +    
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYL----------------AEDTILNIKVAIKAI---F 45

Query: 123 DGDVNDP-YRER---------------VVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKL 165
                     +R               +V ++D             +V E + G  L + 
Sbjct: 46  IPPREKEETLKRFEREVHNSSQLSHQNIVSMID----VDEEDDCYYLVMEYIEGPTLSEY 101

Query: 166 IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL---- 221
           I    +  + ++   +   QIL G+ + H   RI+H DIKP+N+L+      +K      
Sbjct: 102 I--ESHGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILID-SNKTLKIFDFGI 157

Query: 222 --ALNATELAATGH 233
             AL+ T L  T H
Sbjct: 158 AKALSETSLTQTNH 171

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 74.9 bits (184), Expect = 3e-15
 Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 30/201 (14%)

Query: 33  SDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGML-FNNRYRVTRKLGWGHFST 91
            D     +    K   S   +    + + +    PV+I      + Y +  +LG G F  
Sbjct: 113 YDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGV 172

Query: 92  VWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRE----------RVVQLLDD 140
           V   T   T    +           K +    + D     +E           +V L D 
Sbjct: 173 VHRVTERATGNNFA----------AKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222

Query: 141 FKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRI 199
           F+    +   + M++E + G  L + +     + +  +     +RQ+ +GL ++H +   
Sbjct: 223 FE----DDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH-ENNY 276

Query: 200 IHTDIKPENVLLC-VDEARVK 219
           +H D+KPEN++        +K
Sbjct: 277 VHLDLKPENIMFTTKRSNELK 297

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 74.0 bits (182), Expect = 3e-15
 Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 25/148 (16%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKT--QVLV---------SPQFPETALDEIKLLKCVRDG 124
            +Y   +K+G G F       S    +  V         S +  E +  E+ +L      
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLA----- 78

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSII 183
           ++  P    +VQ  + F         + +V +   G +L K I   K      + +    
Sbjct: 79  NMKHPN---IVQYRESF----EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLL 211
            QI   L ++H + +I+H DIK +N+ L
Sbjct: 132 VQICLALKHVHDR-KILHRDIKSQNIFL 158

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 74.1 bits (182), Expect = 3e-15
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 18/112 (16%)

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI 166
              +A  EI LL+ ++           V+ L             V ++F+   H+L  +I
Sbjct: 61  ISMSACREIALLRELKH--------PNVISLQK--VFLSHADRKVWLLFDYAEHDLWHII 110

Query: 167 -------VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                     K   +P   V+S++ QIL G++YLH    ++H D+KP N+L+
Sbjct: 111 KFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILV 161

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 74.1 bits (182), Expect = 4e-15
 Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 62/204 (30%)

Query: 49  SDEDEQEDPNDYCKGGYHPV------KIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVL 102
           SD + +     +C     P         G +   +Y V   +  G    ++         
Sbjct: 47  SDSETKGASEGWCPYCGSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLGWIY--------- 97

Query: 103 VSPQFPETALDE--------IKLLKCVRDGDVNDP------YRER----------VVQLL 138
                   ALD         +K L         D         ER          +VQ+ 
Sbjct: 98  -------LALDRNVNGRPVVLKGLV-----HSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145

Query: 139 DDFKICGVNGTHVC-MVFE-VLGHNLLKLIVKSKYRG-IPLENVRSIIRQILQGLNYLHT 195
           +  +    +G  V  +V E V G +L +          +P+    + + +IL  L+YLH+
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEILPALSYLHS 200

Query: 196 KCRIIHTDIKPENVLLCVDEARVK 219
              +++ D+KPEN++  + E ++K
Sbjct: 201 I-GLVYNDLKPENIM--LTEEQLK 221

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 74.1 bits (182), Expect = 4e-15
 Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 29/197 (14%)

Query: 31  SLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFN--NRYRVTRKLGWGH 88
           + + + H+         S  E +Q   +   K      +    +   +RY +   +G G 
Sbjct: 6   AAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGS 65

Query: 89  FSTVW-----FTGSK------TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQL 137
           +  V                  +V       +  L EI +L  +          + VV++
Sbjct: 66  YGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH--------DHVVKV 117

Query: 138 LDDFKICGVNG-THVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRSIIRQILQGLNYLH 194
           LD      V     + +V E+   +  KL        + L    +++++  +L G+ Y+H
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLF----RTPVYLTELHIKTLLYNLLVGVKYVH 173

Query: 195 TKCRIIHTDIKPENVLL 211
           +   I+H D+KP N L+
Sbjct: 174 S-AGILHRDLKPANCLV 189

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 73.1 bits (180), Expect = 5e-15
 Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 30/156 (19%)

Query: 73  LFNNRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETAL-DEIKLL 118
           LF + Y +   +G G FS V       TG           +   SP      L  E  + 
Sbjct: 21  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL- 176
                  +  P+   +V+LL+ +     +   + MVFE + G +L   IVK    G    
Sbjct: 81  H-----MLKHPH---IVELLETYS----SDGMLYMVFEFMDGADLCFEIVKRADAGFVYS 128

Query: 177 -ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                  +RQIL+ L Y H    IIH D+KP  VLL
Sbjct: 129 EAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLL 163

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 72.4 bits (178), Expect = 6e-15
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 26/153 (16%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSK------TQVLVSPQFPETALDEIKLLKCVR 122
           +   +    K+G G F +V+       G         + L      + AL E+     + 
Sbjct: 9   YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--ENV 179
                  +   VV+    +        H+ +  E   G +L   I ++           +
Sbjct: 69  Q----HSH---VVRYFSAW----AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 117

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
           + ++ Q+ +GL Y+H+   ++H DIKP N+ + 
Sbjct: 118 KDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFIS 149

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 72.8 bits (179), Expect = 7e-15
 Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 30/199 (15%)

Query: 35  ESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGML-FNNRYRVTRKLGWGHFSTVW 93
               +   +      ++ ++   + + K    PV++      + Y +  +LG G F  V 
Sbjct: 9   HHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVH 68

Query: 94  F-----TGS----KTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC 144
                 TG     K      P    T  +EI ++  +           +++ L D F+  
Sbjct: 69  RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH--------HPKLINLHDAFE-- 118

Query: 145 GVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--ENVRSIIRQILQGLNYLHTKCRIIH 201
             +   + ++ E + G  L   I         +    V + +RQ  +GL ++H    I+H
Sbjct: 119 --DKYEMVLILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH-SIVH 172

Query: 202 TDIKPENVLLC-VDEARVK 219
            DIKPEN++      + VK
Sbjct: 173 LDIKPENIMCETKKASSVK 191

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 73.2 bits (180), Expect = 7e-15
 Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 20/153 (13%)

Query: 77  RYRVTRKLGWGHFSTVWF-TGSKTQVLVS----PQFPETALDEIKLLKCVRDGDVNDPYR 131
            Y  T+ +G G F  V+      +  LV+     Q       E+++++ +          
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH-------- 106

Query: 132 ERVVQLLDDFKICG--VNGTHVCMVFEVLGHNLLKLI---VKSKYRGIPLENVRSIIRQI 186
             +V+L   F   G   +  ++ +V + +   + ++     ++K   +P+  V+  + Q+
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQL 165

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            + L Y+H+   I H DIKP+N+LL  D A +K
Sbjct: 166 FRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLK 197

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 28/151 (18%)

Query: 76  NRYRVTRKLGWGHFSTVW-----FTGS-------KTQVLVSPQFPETALDEIKLLKCVRD 123
             +R+ +K+G G FS V+       G        +   L+  +     + EI LLK    
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLK---- 87

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--ENVR 180
             +N P    V++    F    +    + +V E     +L ++I   K +   +    V 
Sbjct: 88  -QLNHPN---VIKYYASF----IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
               Q+   L ++H++ R++H DIKP NV +
Sbjct: 140 KYFVQLCSALEHMHSR-RVMHRDIKPANVFI 169

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 27/156 (17%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSK-------TQVLVSPQFPETALDEIKLLKCV 121
            N+ + ++  LG G  + V+      TG             + P   +  + E ++LK  
Sbjct: 7   SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPV--DVQMREFEVLK-- 62

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIV-KSKYRGIPLENV 179
               +N      +V+L    +       H  ++ E     +L  ++   S   G+P    
Sbjct: 63  ---KLNHKN---IVKLFAIEE--ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
             ++R ++ G+N+L     I+H +IKP N++  + E
Sbjct: 115 LIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGE 149

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 35/165 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALD----EIK 116
           F  +Y     +G G  S V       TG          T   +SP+  E   +    E  
Sbjct: 92  FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH 151

Query: 117 LLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIP 175
           +L+ V            ++ L+D ++    + + + +VF+ +    L   + +   +   
Sbjct: 152 ILRQVAG-------HPHIITLIDSYE----SSSFMFLVFDLMRKGELFDYLTE---KVAL 197

Query: 176 LENV-RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            E   RSI+R +L+ +++LH    I+H D+KPEN +L  D  +++
Sbjct: 198 SEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPEN-ILLDDNMQIR 240

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 36/166 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTG----------SKTQVLVSPQFPETALDEIKLL 118
             + Y +  +LG G F+ V       TG           +          E    E+ +L
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLE 177
           + +R           ++ L D F+    N T V ++ E V G  L   + +   +    E
Sbjct: 63  REIR--------HPNIITLHDIFE----NKTDVVLILELVSGGELFDFLAE---KESLTE 107

Query: 178 N-VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC---VDEARVK 219
           +     ++QIL G++YLH+K RI H D+KPEN++L    V   R+K
Sbjct: 108 DEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIK 152

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 28/158 (17%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSK---TQVLVSPQFPETALDEIKLLKCVRDGD 125
              +Y +   LG G F  V       +        V V          EI +L   R   
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR--- 59

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--ENVRSI 182
                   ++ L + F+    +   + M+FE + G ++ + I         L    + S 
Sbjct: 60  -----HRNILHLHESFE----SMEELVMIFEFISGLDIFERINT---SAFELNEREIVSY 107

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE-ARVK 219
           + Q+ + L +LH+   I H DI+PEN++      + +K
Sbjct: 108 VHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIK 144

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 37/174 (21%), Positives = 58/174 (33%), Gaps = 47/174 (27%)

Query: 70  IGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDE-------IKLLKCVR 122
                ++RY +   LG+G  S V                  A D        +K+L   R
Sbjct: 6   TPSHLSDRYELGEILGFGGMSEVH----------------LARDLRDHRDVAVKVL---R 46

Query: 123 DGDVNDP-YRER---------------VVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKL 165
                DP +  R               +V + D  +     G    +V E V G  L  +
Sbjct: 47  ADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI 106

Query: 166 IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           +       +  +    +I    Q LN+ H    IIH D+KP N+++      VK
Sbjct: 107 V--HTEGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMIS-ATNAVK 156

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 71.2 bits (174), Expect = 3e-14
 Identities = 17/174 (9%), Positives = 47/174 (27%), Gaps = 33/174 (18%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TGSK-------TQVLVSPQFPETALDEIKLLKCVRDG 124
           + ++   L  G  S V+                      S    E   +       +   
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 125 DVNDPYRE-RVVQLLDDFKICGV-------------NGTHVCMVFEVLGHNLLKLIVKSK 170
              +     R++   D   +                   +  ++      +L  L     
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182

Query: 171 YRGI-----PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           +  +      +  +  +  Q+++    L +K  ++H    P+N+ +   + R+ 
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHGHFTPDNLFIM-PDGRLM 234

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 36/157 (22%)

Query: 76  NRYRVTRKLGWGHFSTV-----WFTGS----KTQVLVSPQFPETALDEIKLLKCVRDGDV 126
           +      ++G G F  V       TG     K +V    +     ++E+          +
Sbjct: 58  HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK-KV----RLEVFRVEELVACA-----GL 107

Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLG----HNLLKLIVKSKYRGIPLENVRSI 182
           + P    +V L          G  V +  E+L       L+K     +   +P +     
Sbjct: 108 SSPR---IVPLYG----AVREGPWVNIFMELLEGGSLGQLIK-----QMGCLPEDRALYY 155

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           + Q L+GL YLHT+ RI+H D+K +NVLL  D +R  
Sbjct: 156 LGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAA 191

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 28/157 (17%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKT--QVLV---------SPQFPETALDEIKLLKCVRDG 124
             Y V   +G G +        K+  ++LV         +    +  + E+ LL+     
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR----- 60

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--ENVRS 181
           ++  P    +V+  D         T + +V E   G +L  +I K       L  E V  
Sbjct: 61  ELKHPN---IVRYYDRIID--RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115

Query: 182 IIRQILQGLNYLHTK----CRIIHTDIKPENVLLCVD 214
           ++ Q+   L   H +      ++H D+KP NV L   
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 70.6 bits (173), Expect = 4e-14
 Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 25/159 (15%)

Query: 68  VKIGMLFNNRYRVTRKLGWGHFSTVW-----FTGS----KTQVLVSPQFPETALDEIKLL 118
           V++G     R RV R L  G F+ V+      +G     K  +    +     + E+  +
Sbjct: 23  VELG---ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFM 79

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKIC----GVNGTHVCMVFEVLGHNLLKLIVKSKYRG- 173
           K +     N      +VQ      I             ++ E+    L++ + K + RG 
Sbjct: 80  KKLSGHP-N------IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP 132

Query: 174 IPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLL 211
           +  + V  I  Q  + + ++H  K  IIH D+K EN+LL
Sbjct: 133 LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 70.1 bits (172), Expect = 4e-14
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 28/156 (17%)

Query: 74  FNNRYRVTRKLGWGHFSTVWFTGSK-TQVLV-------SPQFPETALDEIKLLKCVRDGD 125
           + + +     LG G F  V    +              + +   T L E+ LL       
Sbjct: 4   YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLA-----S 58

Query: 126 VNDPYRERVVQLLDDF---------KICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIP 175
           +N  Y   VV+    +                + + +  E      L  LI         
Sbjct: 59  LNHQY---VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQ 114

Query: 176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +    + RQIL+ L+Y+H++  IIH D+KP N+ +
Sbjct: 115 RDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFI 149

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 70.6 bits (173), Expect = 5e-14
 Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 27/156 (17%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSK-------TQVLVSPQFPETALDEIKLLKCV 121
            N+ + ++  LG G  + V+      TG             + P   +  + E ++LK  
Sbjct: 7   SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPV--DVQMREFEVLK-- 62

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVK-SKYRGIPLENV 179
               +N      +V+L    +       H  ++ E     +L  ++ + S   G+P    
Sbjct: 63  ---KLNHKN---IVKLFAIEE--ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
             ++R ++ G+N+L     I+H +IKP N++  + E
Sbjct: 115 LIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGE 149

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 69.7 bits (171), Expect = 9e-14
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 36/166 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSK------------TQVLVSPQFPETALDEIK 116
             + Y +++ LG G    V       T  K                           EI+
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192

Query: 117 LLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIP 175
           +LK      +N P    ++++ + F     +     +V E + G  L   +V +K   + 
Sbjct: 193 ILK-----KLNHPC---IIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKR--LK 237

Query: 176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV--DEARVK 219
               +    Q+L  + YLH    IIH D+KPENVLL    ++  +K
Sbjct: 238 EATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIK 282

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 69.2 bits (170), Expect = 9e-14
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 29/153 (18%)

Query: 74  FNNRYRVT-RKLGWGHFSTVW-----FTG--------SKTQVLVSPQFPETALDEIKLLK 119
           FNN Y +T ++LG G F+ V       TG         K +           L EI +L+
Sbjct: 26  FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAEILHEIAVLE 83

Query: 120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLEN 178
             +          RV+ L + ++    N + + ++ E   G  +  L +      +   +
Sbjct: 84  LAKS-------CPRVINLHEVYE----NTSEIILILEYAAGGEIFSLCLPELAEMVSEND 132

Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           V  +I+QIL+G+ YLH    I+H D+KP+N+LL
Sbjct: 133 VIRLIKQILEGVYYLHQN-NIVHLDLKPQNILL 164

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 27/178 (15%)

Query: 55  EDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVS--------PQ 106
           +DPN   K      K G      Y   + +G G F  V+    + +++ S         Q
Sbjct: 19  DDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVF----QAKLVESDEVAIKKVLQ 74

Query: 107 FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC--MVFEVLGHNLLK 164
                  E+++++ V+           VV L   F   G     V   +V E +   + +
Sbjct: 75  DKRFKNRELQIMRIVKH--------PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR 126

Query: 165 LI---VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
                 K K + +P+  ++  + Q+L+ L Y+H+   I H DIKP+N+LL      +K
Sbjct: 127 ASRHYAKLK-QTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLK 182

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 76  NRYRVTRKLGWGHFSTVW-FTGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVNDP 129
           + Y++ RKLG G +S V+          V      P   +    EIK+L+ +R G     
Sbjct: 36  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGG----- 90

Query: 130 YRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQG 189
               ++ L D  K   V+ T   +VFE + +   K +    Y+ +   ++R  + +IL+ 
Sbjct: 91  --PNIITLADIVKD-PVSRTPA-LVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKA 142

Query: 190 LNYLHTKCRIIHTDIKPENVLL 211
           L+Y H+   I+H D+KP NV++
Sbjct: 143 LDYCHSM-GIMHRDVKPHNVMI 163

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 68.9 bits (169), Expect = 1e-13
 Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 36/166 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTG----------SKTQVLVSPQFPETALDEIKLL 118
             + Y +  +LG G F+ V       TG           +++        E    E+ +L
Sbjct: 10  VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLE 177
           + V            ++ L D ++    N T V ++ E V G  L   + +   +    E
Sbjct: 70  RQVL--------HPNIITLHDVYE----NRTDVVLILELVSGGELFDFLAQ---KESLSE 114

Query: 178 -NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC---VDEARVK 219
               S I+QIL G+NYLHTK +I H D+KPEN++L    +    +K
Sbjct: 115 EEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIK 159

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 36/166 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTG----------SKTQVLVSPQFPETALDEIKLL 118
             + Y +  +LG G F+ V       TG           +++        E    E+ +L
Sbjct: 10  VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLE 177
           + V            V+ L D ++    N T V ++ E V G  L   + +   +    E
Sbjct: 70  RQVL--------HHNVITLHDVYE----NRTDVVLILELVSGGELFDFLAQ---KESLSE 114

Query: 178 -NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC---VDEARVK 219
               S I+QIL G+NYLHTK +I H D+KPEN++L    +    +K
Sbjct: 115 EEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIK 159

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 68.1 bits (167), Expect = 2e-13
 Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 36/166 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTG--------SKTQVLVSPQFP-----ETALDEI 115
           F   Y     LG G  S V       T           T              E  L E+
Sbjct: 15  FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74

Query: 116 KLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGI 174
            +L+ V  G  N      ++QL D ++      T   +VF+ +    L   + +   +  
Sbjct: 75  DILRKV-SGHPN------IIQLKDTYE----TNTFFFLVFDLMKKGELFDYLTE---KVT 120

Query: 175 PLENV-RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
             E   R I+R +L+ +  LH    I+H D+KPEN +L  D+  +K
Sbjct: 121 LSEKETRKIMRALLEVICALHKL-NIVHRDLKPEN-ILLDDDMNIK 164

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 35/163 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTG--------SKTQVLVSPQFPETALDEIKLLKC 120
           F++ Y V  +LG G FS V       TG        +  +  +S +  +    E ++ + 
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDFQKLEREARICR- 60

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENV 179
                +  P    +V+L D  +      +   +VF+ V G  L + IV    R    E  
Sbjct: 61  ----KLQHPN---IVRLHDSIQ----EESFHYLVFDLVTGGELFEDIVA---REFYSEAD 106

Query: 180 -RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC--VDEARVK 219
               I+QIL+ + Y H+   I+H ++KPEN+LL      A VK
Sbjct: 107 ASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVK 148

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 38/192 (19%)

Query: 48  SSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWF---TG-------- 96
            S +D   + ++      +  +     N+ YR+ R L  G F+ +               
Sbjct: 4   GSMKDILSNYSNLIYLNKYVKEKDKYIND-YRIIRTLNQGKFNKIILCEKDNKFYALKKY 62

Query: 97  SKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRER----------VVQLLDDFKICGV 146
            K+ +     F ++  D+I           +D   E            +           
Sbjct: 63  EKSLLEKKRDFTKSNNDKIS-----IKSKYDDFKNELQIITDIKNEYCLTCEGIIT---- 113

Query: 147 NGTHVCMVFE-VLGHNLLKLIVKSKY------RGIPLENVRSIIRQILQGLNYLHTKCRI 199
           N   V +++E +   ++LK               IP++ ++ II+ +L   +Y+H +  I
Sbjct: 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI 173

Query: 200 IHTDIKPENVLL 211
            H D+KP N+L+
Sbjct: 174 CHRDVKPSNILM 185

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 29/157 (18%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSKTQVL-VSPQFPETALDEIKLLKCVRDGDVN 127
           F   ++    +G G F  V+       G KT V+       E A  E+K L       ++
Sbjct: 9   FGMDFKEIELIGSGGFGQVFKAKHRIDG-KTYVIKRVKYNNEKAEREVKALA-----KLD 62

Query: 128 DPYRERVVQLLDDF------------KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGI 174
                 +V     +                     + +  E      L + I K +   +
Sbjct: 63  HVN---IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119

Query: 175 PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                  +  QI +G++Y+H+K ++I+ D+KP N+ L
Sbjct: 120 DKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFL 155

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 67.3 bits (165), Expect = 4e-13
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 30/161 (18%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFP--ETALDEIKLLKCV 121
            YR+   LG G F TV+                 + +VL         T   E+ LL  V
Sbjct: 32  EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE--VLGHNLLKLIVKSKYRGIPLENV 179
             G  + P    V++LLD F+          +V E  +   +L   I +   +G   E  
Sbjct: 92  GAGGGH-PG---VIRLLDWFE----TQEGFMLVLERPLPAQDLFDYITE---KGPLGEGP 140

Query: 180 -RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            R    Q++  + + H++  ++H DIK EN+L+ +     K
Sbjct: 141 SRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAK 180

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 66.9 bits (164), Expect = 5e-13
 Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 40/168 (23%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTG--------SKTQVLVSPQFPETALD----EIK 116
             + Y +++ LG G    V       T         SK +  +              EI+
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67

Query: 117 LLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIV-KSKYRGI 174
           +LK      +N P    ++++ + F     +     +V E + G  L   +V   + +  
Sbjct: 68  ILK-----KLNHPC---IIKIKNFF-----DAEDYYIVLELMEGGELFDKVVGNKRLK-- 112

Query: 175 PLENV-RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV--DEARVK 219
             E   +    Q+L  + YLH +  IIH D+KPENVLL    ++  +K
Sbjct: 113 --EATCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIK 157

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 66.9 bits (164), Expect = 5e-13
 Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 36/166 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTG----------SKTQVLVSPQFPETALDEIKLL 118
            ++ Y    +LG G F+ V       TG           +T+        E    E+ +L
Sbjct: 9   VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLE 177
           K ++           V+ L + ++    N T V ++ E V G  L   + +   +    E
Sbjct: 69  KEIQH--------PNVITLHEVYE----NKTDVILILELVAGGELFDFLAE---KESLTE 113

Query: 178 N-VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC---VDEARVK 219
                 ++QIL G+ YLH+  +I H D+KPEN++L    V + R+K
Sbjct: 114 EEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIK 158

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 66.6 bits (163), Expect = 6e-13
 Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 34/193 (17%)

Query: 40  EENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRY-RVTRKLGWGHFSTV-----W 93
           +E  N+Q    E+ +         G            R+ +   ++G G F TV      
Sbjct: 1   QEERNQQQDDIEELETKAVGMSNDG------------RFLKFDIEIGRGSFKTVYKGLDT 48

Query: 94  FTGSKT---QVLVSPQFPETALD---EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN 147
            T  +    ++               E ++LK ++           +V+  D ++     
Sbjct: 49  ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH--------PNIVRFYDSWESTVKG 100

Query: 148 GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTK-CRIIHTDIKP 206
              + +V E++    LK  +K +++ + ++ +RS  RQIL+GL +LHT+   IIH D+K 
Sbjct: 101 KKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159

Query: 207 ENVLLCVDEARVK 219
           +N+ +      VK
Sbjct: 160 DNIFITGPTGSVK 172

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 66.2 bits (162), Expect = 9e-13
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 20/147 (13%)

Query: 72  MLFNNRYRVTRKLGWGHFSTVWF---TGSKTQVLVSPQFPETA----LDEIKLLKCVRDG 124
           +   NRYR+ RK+G G F  ++      +  +V +  +  +T       E K+ K ++ G
Sbjct: 5   LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ-G 63

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
            V  P            + CG  G +  MV E+LG +L  L      R   L+ V  +  
Sbjct: 64  GVGIP----------TIRWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLAD 112

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           Q++  + Y+H+K   IH D+KP+N L+
Sbjct: 113 QMISRIEYIHSKN-FIHRDVKPDNFLM 138

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 66.2 bits (162), Expect = 1e-12
 Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 35/213 (16%)

Query: 19  HNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRY 78
           H+ +++    D  L  E+   +   +   S+         DY   G +   +    ++ +
Sbjct: 2   HHHHHHSSGVD--LGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDAL----SDFF 55

Query: 79  RVTRKLGWGHFSTVWF-TGSKTQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYR 131
            V  +LG G  S V+      TQ   + +        +    EI +L       ++ P  
Sbjct: 56  EVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL-----RLSHPN- 109

Query: 132 ERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIV-KSKYRGIPLENV-RSIIRQILQ 188
             +++L + F+      T + +V E V G  L   IV K  Y     E      ++QIL+
Sbjct: 110 --IIKLKEIFE----TPTEISLVLELVTGGELFDRIVEKGYYS----ERDAADAVKQILE 159

Query: 189 GLNYLHTKCRIIHTDIKPENVLLC--VDEARVK 219
            + YLH    I+H D+KPEN+L      +A +K
Sbjct: 160 AVAYLHEN-GIVHRDLKPENLLYATPAPDAPLK 191

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 30/161 (18%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TGSK-------TQVLVSPQFPETALDEIKLLKCV 121
           F++RY+  R LG G F  V       TG +        + +      E+ L E++LLK  
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK-- 81

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVR 180
               ++ P    +++L + F+    +  +  +V E   G  L   I+  K       +  
Sbjct: 82  ---QLDHPN---IMKLYEFFE----DKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAA 129

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLL--CVDEARVK 219
            IIRQ+L G+ Y+H   +I+H D+KPEN+LL     +A ++
Sbjct: 130 RIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIR 169

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 67/212 (31%)

Query: 62  KGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWF-----TG--------SKTQVL-VSPQF 107
           +  Y      +    +Y +   +G G +  V       T         +K ++  ++P+ 
Sbjct: 12  ENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKD 71

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLI 166
            E    E++L+K +            + +L + ++    +  ++C+V E+  G +LL  +
Sbjct: 72  VERIKTEVRLMKKLHH--------PNIARLYEVYE----DEQYICLVMELCHGGHLLDKL 119

Query: 167 VKSKYRGIPLEN--------------------------------------VRSIIRQILQ 188
                                                             + +I+RQI  
Sbjct: 120 NVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVDE-ARVK 219
            L+YLH +  I H DIKPEN L   ++   +K
Sbjct: 180 ALHYLHNQ-GICHRDIKPENFLFSTNKSFEIK 210

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 35/163 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKC 120
           F++ Y V  +LG G FS V       TG        +  ++  S +  +    E ++ + 
Sbjct: 27  FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRK 84

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENV 179
           ++           +V+L D  +      +   +VF+ V G  L + IV    R    E  
Sbjct: 85  LQ--------HPNIVRLHDSIQ----EESFHYLVFDLVTGGELFEDIVA---REFYSEAD 129

Query: 180 -RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC--VDEARVK 219
               I+QIL+ + Y H+   I+H ++KPEN+LL      A VK
Sbjct: 130 ASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVK 171

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 29/166 (17%)

Query: 62  KGGYHPVKI-GMLFN--NRYRVTRKLGWGHFSTVW-----FTGSK------TQVLVSPQF 107
           K G++   +    +     Y     +G G + +V       +G K      ++   S  F
Sbjct: 7   KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF 66

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKL 165
            + A  E+ LLK ++         E V+ LLD F       N     +V   +  +L K+
Sbjct: 67  AKRAYRELLLLKHMQH--------ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI 118

Query: 166 IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +   K      E ++ ++ Q+L+GL Y+H+   ++H D+KP N+ +
Sbjct: 119 M-GLK---FSEEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAV 159

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 24/171 (14%), Positives = 43/171 (25%), Gaps = 49/171 (28%)

Query: 71  GMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKL-----LKCVRDGD 125
             + N RYR+    G       W                 ALD   L     L  V    
Sbjct: 26  ARIANGRYRLLIFHGGVPPLQFW----------------QALDT-ALDRQVALTFVDPQG 68

Query: 126 VNDP-YRER---------------VVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVK 168
           V      +                V ++LD             +V E + G +L ++   
Sbjct: 69  VLPDDVLQETLSRTLRLSRIDKPGVARVLD----VVHTRAGGLVVAEWIRGGSLQEVAD- 123

Query: 169 SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
                         ++ +    +  H +  +  +   P  V +   +  V 
Sbjct: 124 ---TSPSPVGAIRAMQSLAAAADAAH-RAGVALSIDHPSRVRVS-IDGDVV 169

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 31/152 (20%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKC 120
           F  RY +   LG G F  V       T         +K       +   T L E++LLK 
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS--AKNKDTSTILREVELLKK 77

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENV 179
           +            +++L +  +    + +   +V E   G  L   I+K K       + 
Sbjct: 78  LD--------HPNIMKLFEILE----DSSSFYIVGELYTGGELFDEIIKRKR--FSEHDA 123

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             II+Q+  G+ Y+H    I+H D+KPEN+LL
Sbjct: 124 ARIIKQVFSGITYMHKH-NIVHRDLKPENILL 154

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 22/150 (14%)

Query: 76  NRYRVTRKLGWGHFSTVW-----FTGSKT---QVLVSPQFPETALDEIKLLKCVRDGDVN 127
           +R++V R  G G F TV       TG      +V+  P+F    L  ++ L  +      
Sbjct: 23  DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH----- 77

Query: 128 DPYRERVVQLLDDFKICGV---NGTHVCMVFEVLGHNLLKLIVKSKYRG--IPLENVRSI 182
                 +VQL   F   G       ++ +V E +   L +       R    P   ++  
Sbjct: 78  ---HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134

Query: 183 IRQILQGLNYLHTKC-RIIHTDIKPENVLL 211
           + Q+++ +  LH     + H DIKP NVL+
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLV 164

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 28/151 (18%)

Query: 72  MLFNNRYRVTRKLGWGHFSTVWF---TGSKTQVLV--------SPQFPETALDEIKLLKC 120
           ++    +RV +K+G G+F  +       +   V +        +PQ       E +  K 
Sbjct: 5   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLH----LEYRFYKQ 60

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVR 180
           +  G       + + Q+       G  G +  MV E+LG +L  L      R   L+ V 
Sbjct: 61  LGSG-------DGIPQVYY----FGPCGKYNAMVLELLGPSLEDLF-DLCDRTFSLKTVL 108

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            I  Q++  + Y+H+K  +I+ D+KPEN L+
Sbjct: 109 MIAIQLISRMEYVHSKN-LIYRDVKPENFLI 138

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 65.3 bits (159), Expect = 3e-12
 Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 33/187 (17%)

Query: 35  ESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW- 93
           +  +E E + +Q    E                 K+G L ++ +    +LG G+   V+ 
Sbjct: 2   KKLEELELDEQQRKRLEAFLTQKQ----------KVGELKDDDFEKISELGAGNGGVVFK 51

Query: 94  ----FTGS----KT-QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC 144
                +G     K   + + P      + E+++L      + N PY   +V     F   
Sbjct: 52  VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH-----ECNSPY---IVGFYGAF--- 100

Query: 145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI 204
             +   + +  E +    L  ++K K   IP + +  +   +++GL YL  K +I+H D+
Sbjct: 101 -YSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158

Query: 205 KPENVLL 211
           KP N+L+
Sbjct: 159 KPSNILV 165

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 32/168 (19%)

Query: 62  KGGYHPVKI-GMLFN--NRYRVTRKLGWGHFSTVW-----FTGSK------TQVLVSPQF 107
           + G++  ++    +     YR  + +G G +  V       TG+K       +   S  F
Sbjct: 8   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 67

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH--VCMVFEVLGHNLLKL 165
            + A  E++LLK +R         E V+ LLD F             +V   +G +L KL
Sbjct: 68  AKRAYRELRLLKHMRH--------ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKL 119

Query: 166 IVKSKYRGIPLEN--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +     +   L    ++ ++ Q+L+GL Y+H    IIH D+KP N+ +
Sbjct: 120 M-----KHEKLGEDRIQFLVYQMLKGLRYIHA-AGIIHRDLKPGNLAV 161

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 65.1 bits (158), Expect = 3e-12
 Identities = 27/190 (14%), Positives = 59/190 (31%), Gaps = 41/190 (21%)

Query: 67  PVKIGMLFNNRYRVT---RKLGWGHFSTVWF-----TGSK-------TQVLVSPQFPETA 111
           P ++      R R       LG              TG                   +  
Sbjct: 66  PFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQM 125

Query: 112 LDEIKLLKCVRDGD-----------------VNDPYRERVVQLLDDFKICGVNGTHVCMV 154
            +E+  L+ +R                    V DP +++++++  D +   V       +
Sbjct: 126 KEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWV--LSRFFL 183

Query: 155 FEVLGHNLLKLI-----VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV 209
           +  +  NL           S ++ +       +  Q+++ L  LH    ++HT ++P ++
Sbjct: 184 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYLRPVDI 242

Query: 210 LLCVDEARVK 219
           +L      V 
Sbjct: 243 VLDQRG-GVF 251

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 64.7 bits (158), Expect = 3e-12
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 146 VNGTHVCMVFEVLG---HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHT 202
                  +  E++        K +       IP E +  I    ++ LN+L    +IIH 
Sbjct: 91  FREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHR 150

Query: 203 DIKPENVLLCVDEARVK 219
           DIKP N+LL      +K
Sbjct: 151 DIKPSNILLD-RSGNIK 166

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 26/148 (17%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVND 128
           F + Y V   +G G +S         T  +  V +  +      +EI++L          
Sbjct: 20  FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRY----GQH 75

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKY---RGIPLENVRSIIR 184
           P    ++ L D +     +G +V +V E + G  LL  I++ K+   R        +++ 
Sbjct: 76  PN---IITLKDVYD----DGKYVYVVTELMKGGELLDKILRQKFFSER-----EASAVLF 123

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLC 212
            I + + YLH    ++H D+KP N+L  
Sbjct: 124 TITKTVEYLH-AQGVVHRDLKPSNILYV 150

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 33/173 (19%)

Query: 62  KGGYHPVKI-GMLFN--NRYRVTRKLGWGHFSTVW-------------------FTGSKT 99
           KG      +   L    + Y V R +  G +  V                      G   
Sbjct: 5   KGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTV 64

Query: 100 QVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG-THVCMVFEVL 158
            +L      +  L EI+LL               ++ L D F          + +V E++
Sbjct: 65  NILSDSFLCKRVLREIRLLNHFHH--------PNILGLRDIFVHFEEPAMHKLYLVTELM 116

Query: 159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             +L ++I   +   I  ++++  +  IL GL+ LH    ++H D+ P N+LL
Sbjct: 117 RTDLAQVI-HDQRIVISPQHIQYFMYHILLGLHVLHE-AGVVHRDLHPGNILL 167

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 146 VNGTHVCMVFEVLGHNLLKLI--VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTD 203
                V +  E++  +L K    V  K + IP + +  I   I++ L +LH+K  +IH D
Sbjct: 76  FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRD 135

Query: 204 IKPENVLLCVDEARVK 219
           +KP NVL+     +VK
Sbjct: 136 VKPSNVLIN-ALGQVK 150

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 65.1 bits (158), Expect = 4e-12
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 23/163 (14%)

Query: 63  GGYHPVKIGMLFNNRYRVTRKLGWGHFSTVW-----FTGSKTQV-----LVSPQFPETAL 112
           GG     +       + +  +LG G F  V       TG +  +      +SP+  E   
Sbjct: 1   GGGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 60

Query: 113 DEIKLLKCVRDGDVNDPYRERVVQLLD--DFKICGVNGTHVCMVFE-VLGHNLLKLIVK- 168
            EI+++K      +N P    VV   +  D            +  E   G +L K + + 
Sbjct: 61  LEIQIMK-----KLNHPN---VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF 112

Query: 169 SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
               G+    +R+++  I   L YLH + RIIH D+KPEN++L
Sbjct: 113 ENCCGLKEGPIRTLLSDISSALRYLH-ENRIIHRDLKPENIVL 154

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 64.7 bits (158), Expect = 4e-12
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 32/166 (19%)

Query: 64  GYHPVKI-GMLFN--NRYRVTRKLGWGHFSTVW---FTGSKTQVLV--------SPQFPE 109
            ++  ++   ++    RY+    +G G + +V     T +  +V V        S    +
Sbjct: 14  TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73

Query: 110 TALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIV 167
               E++LLK ++         E V+ LLD F           V +V  ++G +L  ++ 
Sbjct: 74  RTYRELRLLKHMKH--------ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV- 124

Query: 168 KSKYRGIPLEN--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
               +   L +  V+ +I QIL+GL Y+H+   IIH D+KP N+ +
Sbjct: 125 ----KCQKLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAV 165

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 17/110 (15%)

Query: 113 DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKY 171
           +EI L K      +       +VQ L            + +  E V G +L  L+ +SK+
Sbjct: 68  EEIALHK-----HLKHKN---IVQYLG----SFSENGFIKIFMEQVPGGSLSALL-RSKW 114

Query: 172 RGIPL-EN-VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
             +   E  +    +QIL+GL YLH   +I+H DIK +NVL+      +K
Sbjct: 115 GPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLK 163

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 27/149 (18%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGD 125
           + +++   LG G +  V       +   V +        P F    L EIK+LK  +   
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH-- 68

Query: 126 VNDPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRSI 182
                 E ++ + +  +     N   V ++ E++  +L ++I         L +  ++  
Sbjct: 69  ------ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSDDHIQYF 117

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           I Q L+ +  LH    +IH D+KP N+L+
Sbjct: 118 IYQTLRAVKVLHG-SNVIHRDLKPSNLLI 145

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 64.3 bits (157), Expect = 5e-12
 Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 19/152 (12%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVND---- 128
           N      ++G G    VW   F  +   + V         +E K +  + D DV      
Sbjct: 25  NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRI--LMDLDVVLKSHD 82

Query: 129 -PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
            PY   +VQ    F    +  T V +  E++G    KL  K     IP   +  +   I+
Sbjct: 83  CPY---IVQCFGTF----ITNTDVFIAMELMGTCAEKLK-KRMQGPIPERILGKMTVAIV 134

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           + L YL  K  +IH D+KP N+LL  +  ++K
Sbjct: 135 KALYYLKEKHGVIHRDVKPSNILLD-ERGQIK 165

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 63.9 bits (156), Expect = 5e-12
 Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 20/148 (13%)

Query: 71  GMLFNNRYRVTRKLGWGHFSTVWF---TGSKTQVLVSPQFPETA----LDEIKLLKCVRD 123
             +    Y+V R++G G F  ++      +  QV +  +   +      DE +  K +  
Sbjct: 5   NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAG 64

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
                     +  +       G  G H  +V ++LG +L  L+     R   ++ V    
Sbjct: 65  C-------TGIPNVYY----FGQEGLHNVLVIDLLGPSLEDLL-DLCGRKFSVKTVAMAA 112

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +Q+L  +  +H K  +++ DIKP+N L+
Sbjct: 113 KQMLARVQSIHEKS-LVYRDIKPDNFLI 139

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 31/161 (19%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRE 132
           F   Y++  +LG G FS V                   A   I   K +   D     RE
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEY-------AAMIIN-TKKLSARDHQKLERE 60

Query: 133 ----------RVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENV-R 180
                      +V+L D          H  ++F+ V G  L + IV    R    E    
Sbjct: 61  ARICRLLKHPNIVRLHDSIS----EEGHHYLIFDLVTGGELFEDIVA---REYYSEADAS 113

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLLC--VDEARVK 219
             I+QIL+ + + H    ++H ++KPEN+LL   +  A VK
Sbjct: 114 HCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVK 153

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 63.8 bits (156), Expect = 6e-12
 Identities = 39/190 (20%), Positives = 65/190 (34%), Gaps = 52/190 (27%)

Query: 70  IGMLFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIK----LLKCVRDGD 125
            G  F   YR+ R +G G    V+                 A D ++     LK + +  
Sbjct: 29  EGTQFG-PYRLRRLVGRGGMGDVYE----------------AEDTVRERIVALKLMSETL 71

Query: 126 VNDP-YRER---------------VVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVK 168
            +DP +R R               VV + D     G     + +    + G +L  ++  
Sbjct: 72  SSDPVFRTRMQREARTAGRLQEPHVVPIHD----FGEIDGQLYVDMRLINGVDLAAML-- 125

Query: 169 SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK------TLA 222
            +   +      +I+RQI   L+  H      H D+KPEN+L+  D+            A
Sbjct: 126 RRQGPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADD-FAYLVDFGIASA 183

Query: 223 LNATELAATG 232
               +L   G
Sbjct: 184 TTDEKLTQLG 193

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 63.4 bits (155), Expect = 7e-12
 Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 31/160 (19%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-TGSKTQVLV--------SPQFPETALDEIKLLKCVRDG 124
               +     LG G FS V+      T  L               +  +EI +LK     
Sbjct: 7   IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLK----- 61

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIV-KSKYRGIPLENV-RS 181
            +       +V L D ++    + TH  +V + V G  L   I+ +  Y     E     
Sbjct: 62  KIKHEN---IVTLEDIYE----STTHYYLVMQLVSGGELFDRILERGVYT----EKDASL 110

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLLCV--DEARVK 219
           +I+Q+L  + YLH    I+H D+KPEN+L     + +++ 
Sbjct: 111 VIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIM 149

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 63.4 bits (155), Expect = 7e-12
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 32/154 (20%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKC 120
            ++ +   RKLG G F  V       +G        +K +  V     E    EI++LK 
Sbjct: 20  IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM---EQIEAEIEVLKS 76

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--E 177
           +            ++++ + F+    +  ++ +V E   G  LL+ IV ++ RG  L   
Sbjct: 77  LD--------HPNIIKIFEVFE----DYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124

Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            V  +++Q++  L Y H++  ++H D+KPEN+L 
Sbjct: 125 YVAELMKQMMNALAYFHSQ-HVVHKDLKPENILF 157

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 64.3 bits (156), Expect = 8e-12
 Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 20/144 (13%)

Query: 75  NNRYRVTRKLGWGHFSTVWF---TGSKTQVLVSPQFPETA----LDEIKLLKCVRDGDVN 127
            N++R+ RK+G G F  ++      +  +V +  +  +T     L E K+ + ++ G   
Sbjct: 6   GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQ-GGTG 64

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
            P          + +  GV G +  +V ++LG +L  L      R + L+ V  +  Q++
Sbjct: 65  IP----------NVRWFGVEGDYNVLVMDLLGPSLEDLF-NFCSRKLSLKTVLMLADQMI 113

Query: 188 QGLNYLHTKCRIIHTDIKPENVLL 211
             + ++H+K   +H DIKP+N L+
Sbjct: 114 NRVEFVHSKS-FLHRDIKPDNFLM 136

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 64.0 bits (156), Expect = 9e-12
 Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 27/150 (18%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDG 124
           + Y +   +G G +  V+      ++  V +             +  L EI +L  ++  
Sbjct: 26  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS- 84

Query: 125 DVNDPYRERVVQLLDDFKICGVNG-THVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRS 181
                  + +++L D      +     + +V E+   +L KL        I L    +++
Sbjct: 85  -------DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF----KTPIFLTEEHIKT 133

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           I+  +L G N++H    IIH D+KP N LL
Sbjct: 134 ILYNLLLGENFIHE-SGIIHRDLKPANCLL 162

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 63.9 bits (156), Expect = 9e-12
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 27/150 (18%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRE 132
           F  RY +   LG G F  V       TQ          A+  I      ++ D +   RE
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEY-------AVKVINKAS-AKNKDTSTILRE 71

Query: 133 ----------RVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRS 181
                      +++L +  +    + +   +V E   G  L   I+K K       +   
Sbjct: 72  VELLKKLDHPNIMKLFEILE----DSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAAR 125

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           II+Q+  G+ Y+H    I+H D+KPEN+LL
Sbjct: 126 IIKQVFSGITYMHKH-NIVHRDLKPENILL 154

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 63.1 bits (154), Expect = 9e-12
 Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 32/161 (19%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFP--ETALDEIKLLKCV 121
           +Y+V   LG G F +V+                 K ++    + P       E+ LLK V
Sbjct: 44  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGH-NLLKLIVKSKYRGIPLENV 179
             G         V++LLD F+          ++ E      +L   I +   RG   E +
Sbjct: 104 SSGFSG------VIRLLDWFE----RPDSFVLILERPEPVQDLFDFITE---RGALQEEL 150

Query: 180 -RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            RS   Q+L+ + + H  C ++H DIK EN+L+ ++   +K
Sbjct: 151 ARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELK 190

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 28/148 (18%)

Query: 77  RYRVTRKLGWGHFSTVW-----FTGSK------TQVLVSPQFPETALDEIKLLKCVRDGD 125
           +Y + +KLG G +  VW      TG             +    +    EI +L  +    
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG-- 67

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRSII 183
                 E +V LL+  +    N   V +VF+ +  +L  +I     R   LE    + ++
Sbjct: 68  -----HENIVNLLNVLRA--DNDRDVYLVFDYMETDLHAVI-----RANILEPVHKQYVV 115

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLL 211
            Q+++ + YLH+   ++H D+KP N+LL
Sbjct: 116 YQLIKVIKYLHS-GGLLHRDMKPSNILL 142

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 44/198 (22%), Positives = 72/198 (36%), Gaps = 44/198 (22%)

Query: 37  HDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWF-- 94
           H    +  ++    +    +P  Y +               Y   RKLG G +  V    
Sbjct: 3   HHHHHSSGRENLYFQGIAINPGMYVRKKEGK------IGESYFKVRKLGSGAYGEVLLCK 56

Query: 95  ---TG--------SKTQVLVSPQFPETA---------LDEIKLLKCVRDGDVNDPYRERV 134
                         K+Q        +            +EI LLK +     + P    +
Sbjct: 57  EKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-----DHPN---I 108

Query: 135 VQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYL 193
           ++L D F+    +  +  +V E   G  L + I+          +  +I++QIL G+ YL
Sbjct: 109 IKLFDVFE----DKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQILSGICYL 162

Query: 194 HTKCRIIHTDIKPENVLL 211
           H    I+H DIKPEN+LL
Sbjct: 163 HKH-NIVHRDIKPENILL 179

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 63.1 bits (153), Expect = 1e-11
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 29/157 (18%)

Query: 73  LFNNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRE 132
           L +    V   LG G F+ V+               +    +  +LK  +  +  + Y  
Sbjct: 62  LGSKLVYVHHLLGEGAFAQVYEATQGD-------LNDAKNKQKFVLKVQKPANPWEFYIG 114

Query: 133 R-------------VVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKY---RGIP 175
                          ++         +      +V E+  +  LL  I   K    + +P
Sbjct: 115 TQLMERLKPSMQHMFMKFYSAH----LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMP 170

Query: 176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
              V S   ++L  +  +H  C IIH DIKP+N +L 
Sbjct: 171 QGLVISFAMRMLYMIEQVH-DCEIIHGDIKPDNFILG 206

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 31/161 (19%)

Query: 74  FNNRYRVTRK--LGWGHFSTVW-----FTGS----KTQVLVSPQFPETALDEIKLLKCVR 122
            N+ Y V++   LG G F  V       TG     K       +  E   +EI ++  + 
Sbjct: 85  VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD 144

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--ENV 179
                      ++QL D F+    +   + +V E V G  L   I+        L   + 
Sbjct: 145 --------HANLIQLYDAFE----SKNDIVLVMEYVDGGELFDRIID---ESYNLTELDT 189

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC-VDEARVK 219
              ++QI +G+ ++H    I+H D+KPEN+L    D  ++K
Sbjct: 190 ILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIK 229

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 33/152 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKC 120
            N  Y +   +G G +  V       T          K  V    +  +    EI+++K 
Sbjct: 7   INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKS 62

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENV 179
           +            +++L + F+    + T + +V E   G  L + +V  +       + 
Sbjct: 63  LD--------HPNIIRLYETFE----DNTDIYLVMELCTGGELFERVVHKRV--FRESDA 108

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             I++ +L  + Y H    + H D+KPEN L 
Sbjct: 109 ARIMKDVLSAVAYCHKL-NVAHRDLKPENFLF 139

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 22/154 (14%), Positives = 51/154 (33%), Gaps = 19/154 (12%)

Query: 75  NNRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKL-----------LKCVRD 123
             ++++       +   + +  + T  L     P+     +KL               R 
Sbjct: 41  GRQWKLKSFQTRDNQGIL-YEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRA 99

Query: 124 GDVNDPYRERVVQLLDDFKI-----CGVN-GTHVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
                  + + +       I      GV+   +  +V   LG +L   +  S    +   
Sbjct: 100 AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSER 159

Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +V  +  ++L  L +LH     +H ++  EN+ +
Sbjct: 160 SVLQVACRLLDALEFLHENE-YVHGNVTAENIFV 192

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 35/157 (22%)

Query: 76  NRYRVTRKLGWGHFSTVW-FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDGDV 126
           +RY   + LG G    V+    +     V         PQ  + AL EIK+++ +     
Sbjct: 11  SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH--- 67

Query: 127 NDPYRERVVQLLDDFKICGVNGTH----------VCMVFEVLGHNLLKLIVKSKYRGIPL 176
                + +V++ +     G   T           V +V E +  +L  ++        PL
Sbjct: 68  -----DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL-----EQGPL 117

Query: 177 EN--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                R  + Q+L+GL Y+H+   ++H D+KP N+ +
Sbjct: 118 LEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANLFI 153

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 31/152 (20%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKC 120
            +  Y+  +KLG G +  V       T          KT V  S       L+E+ +LK 
Sbjct: 35  LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV--STSSNSKLLEEVAVLKL 92

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENV 179
           +     + P    +++L D F+    +  +  +V E   G  L   I+          + 
Sbjct: 93  L-----DHPN---IMKLYDFFE----DKRNYYLVMECYKGGELFDEIIHRMK--FNEVDA 138

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             II+Q+L G+ YLH    I+H D+KPEN+LL
Sbjct: 139 AVIIKQVLSGVTYLHKH-NIVHRDLKPENLLL 169

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 36/165 (21%)

Query: 76  NRYRVTRKLGWGHFSTV-----WFTG--------SKTQVLVSPQFPETALDEIKLLKCVR 122
           N+Y +  ++G G +  V                 SK +++    FP              
Sbjct: 13  NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72

Query: 123 DGDVNDP----YRE----------RVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIV 167
                 P    Y+E           VV+L++   +   N  H+ MVFE V    ++++  
Sbjct: 73  CIQPRGPIEQVYQEIAILKKLDHPNVVKLVE--VLDDPNEDHLYMVFELVNQGPVMEVPT 130

Query: 168 KSKYRGIPLENV-RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                    E+  R   + +++G+ YLH + +IIH DIKP N+L+
Sbjct: 131 LKPLS----EDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLV 170

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 37/199 (18%)

Query: 74  FNNRYRVTRKLGWGHFSTVW----------FTGSKTQVLVSPQFPETALDEIKLLKCVRD 123
           +   +   + LG G F  V+          +   + ++       E  + E+K L     
Sbjct: 3   YLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALA---- 58

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTH--------VCMVFE-VLGHNLLKLIVKSKYRGI 174
             +  P    +V+  + +                 + +  +     NL   +        
Sbjct: 59  -KLEHPG---IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114

Query: 175 PLEN-VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK-------TLALNAT 226
              +    I  QI + + +LH+K  ++H D+KP N+   +D+  VK       T      
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDE 172

Query: 227 ELAATGHKLPVSFCSTAPV 245
           E       +P     T  V
Sbjct: 173 EEQTVLTPMPAYARHTGQV 191

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 29/158 (18%)

Query: 67  PVKIGMLFNNRYRVTRKLGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGD 125
            +K   + ++    ++ LG G    V      +TQ   +             LK ++D  
Sbjct: 9   QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFA-------------LKMLQD-- 53

Query: 126 VNDPYRE-----------RVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRG 173
                RE            +V+++D ++        + +V E + G  L   I     + 
Sbjct: 54  CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 113

Query: 174 IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                   I++ I + + YLH    I H D+KPEN+L 
Sbjct: 114 FTEREASEIMKSIGEAIQYLH-SINIAHRDVKPENLLY 150

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 61.5 bits (150), Expect = 5e-11
 Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 27/149 (18%)

Query: 76  NRYRVTRKLGWGHFSTVWF---TGSKTQVLV-------SPQFPETALDEIKLLKCVRDGD 125
            RY     +G G +  V       +K +V +          + +  L EIK+L   R   
Sbjct: 27  PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH-- 84

Query: 126 VNDPYRERVVQLLDDFKICGVNG-THVCMVFEVLGHNLLKLIVKSKYRGIPLEN--VRSI 182
                 E ++ + D  +   +     V +V +++  +L KL+ K++     L N  +   
Sbjct: 85  ------ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-KTQ----HLSNDHICYF 133

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           + QIL+GL Y+H+   ++H D+KP N+LL
Sbjct: 134 LYQILRGLKYIHS-ANVLHRDLKPSNLLL 161

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 40/166 (24%)

Query: 74  FNNRYRVTRK-LGWGHFSTVW-----FTG--------SKTQVLVSPQFPETALDEIKLLK 119
           F + Y++    LG G  + V       T          K               E+++L 
Sbjct: 10  FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----HIRSRVFREVEMLY 65

Query: 120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKY---RGIP 175
             +           V++L++ F+          +VFE + G ++L  I K ++       
Sbjct: 66  QCQG-------HRNVLELIEFFE----EEDRFYLVFEKMRGGSILSHIHKRRHFNEL--- 111

Query: 176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL 221
                 +++ +   L++LH K  I H D+KPEN +LC    +V  +
Sbjct: 112 --EASVVVQDVASALDFLHNK-GIAHRDLKPEN-ILCEHPNQVSPV 153

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 61.2 bits (149), Expect = 6e-11
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVRD 123
           RY   R LG G F+  +      T          K+  L+ P   E    EI + + +  
Sbjct: 42  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAH 100

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSI 182
                 +   VV     F+    +   V +V E     +LL+L  + K   +     R  
Sbjct: 101 -----QH---VVGFHGFFE----DNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYY 146

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +RQI+ G  YLH   R+IH D+K  N+ L
Sbjct: 147 LRQIVLGCQYLHRN-RVIHRDLKLGNLFL 174

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 36/155 (23%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALD----EIKLLK 119
           +Y     LG G F  VW                 K +VL      +  L     EI +L 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE--VLGHNLLKLIVKSKYRGIPLE 177
            V            ++++LD F+    N     +V E    G +L   I +        E
Sbjct: 85  RVEH-----AN---IIKVLDIFE----NQGFFQLVMEKHGSGLDLFAFIDR---HPRLDE 129

Query: 178 NV-RSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +   I RQ++  + YL  K  IIH DIK EN+++
Sbjct: 130 PLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVI 163

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 60.8 bits (148), Expect = 6e-11
 Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 29/149 (19%)

Query: 82  RKLGWGHFSTVWFTGS-KTQV----LVSPQFPETALD----EIKLLKCVRDGDVNDPYRE 132
             +G G F  V+  G    +V    +   +  E  L     E+   +  R         E
Sbjct: 39  ELIGKGRFGQVY-HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTR--------HE 89

Query: 133 RVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGL 190
            VV  +      G   +  H+ ++  +     L  +V+     + +   R I ++I++G+
Sbjct: 90  NVVLFM------GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGM 143

Query: 191 NYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            YLH K  I+H D+K +NV    D  +V 
Sbjct: 144 GYLHAK-GILHKDLKSKNVF--YDNGKVV 169

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 61.3 bits (149), Expect = 6e-11
 Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 52/186 (27%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQVLVS--PQFPETALDEIKLLKCVRDGDVNDPY 130
            +Y + + LG G F  V       S  +  +    Q P     E+ ++K +         
Sbjct: 7   KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDH------- 59

Query: 131 RERVVQLLDDFKICGVNGTHVC----------------------------------MVFE 156
              +++L+D F   G                                         ++ E
Sbjct: 60  -VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118

Query: 157 VLG---HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV 213
            +    H +LK  ++S    IP+  +   I Q+ + + ++H+   I H DIKP+N+L+  
Sbjct: 119 YVPDTLHKVLKSFIRSGRS-IPMNLISIYIYQLFRAVGFIHS-LGICHRDIKPQNLLVNS 176

Query: 214 DEARVK 219
            +  +K
Sbjct: 177 KDNTLK 182

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 60.3 bits (147), Expect = 7e-11
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVRD 123
           RY   R LG G F+  +      T          K+  L+ P   E    EI + + +  
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAH 74

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSI 182
                 +   VV     F+    +   V +V E     +LL+L  + K   +     R  
Sbjct: 75  -----QH---VVGFHGFFE----DNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYY 120

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +RQI+ G  YLH   R+IH D+K  N+ L
Sbjct: 121 LRQIVLGCQYLHRN-RVIHRDLKLGNLFL 148

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 60.5 bits (147), Expect = 9e-11
 Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 18/159 (11%)

Query: 68  VKIGMLFNNRYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQFPETA---LDEIKLLK 119
             +  +  N++ + +K+G G F  ++         K    V     +       E+K  +
Sbjct: 29  KVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQ 88

Query: 120 CVRDGDVNDPYRERVVQLLD---DFKICGV----NGTHVCMVFEVLGHNLLKLIVKSKYR 172
            V   D    + ER          F   G+      ++  MV E LG +L K+    +  
Sbjct: 89  RVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKIS--GQNG 146

Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                 V  +  ++L  L Y+H     +H DIK  N+LL
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLL 184

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 60.4 bits (146), Expect = 1e-10
 Identities = 24/177 (13%), Positives = 54/177 (30%), Gaps = 38/177 (21%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TGSK-------TQVLVSPQFPETALDEIKLLKCVRDG 124
                  LG              TG                   +   +E+  L+ +R  
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133

Query: 125 D-----------------VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLI- 166
                             V DP +++++++  D +   V       ++  +  NL     
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWV--LSRFFLYPRMQSNLQTFGE 191

Query: 167 ----VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
                 S ++ +       +  Q+++ L  LH    ++HT ++P +++L      V 
Sbjct: 192 VLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYLRPVDIVLD-QRGGVF 246

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 33/168 (19%)

Query: 62  KGGYHPVKI-GMLFN--NRYRVTRKLGWGHFSTVW-----FTGSK------TQVLVSPQF 107
              ++ V+I    F    RY+  + +G G    V                 ++   +   
Sbjct: 8   DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH 67

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT--HVCMVFEVLGHNLLKL 165
            + A  E+ L+KCV          + ++ LL+ F           V +V E++  NL ++
Sbjct: 68  AKRAYRELVLMKCVNH--------KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV 119

Query: 166 IVKSKYRGIPLEN--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           I         L++  +  ++ Q+L G+ +LH+   IIH D+KP N+++
Sbjct: 120 IQM------ELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV 160

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 33/168 (19%)

Query: 62  KGGYHPVKI-GMLFN--NRYRVTRKLGWGHFSTVW-----FTGSK------TQVLVSPQF 107
              ++ V++    F    RY+  + +G G    V                 ++   +   
Sbjct: 45  DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 104

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKL 165
            + A  E+ L+KCV          + ++ LL+ F           V +V E++  NL ++
Sbjct: 105 AKRAYRELVLMKCVN--------HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV 156

Query: 166 IVKSKYRGIPLEN--VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           I         L++  +  ++ Q+L G+ +LH+   IIH D+KP N+++
Sbjct: 157 IQM------ELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVV 197

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 37/169 (21%)

Query: 82  RKLGWGHFSTVWFTGSKTQVLV--------SPQFPETALDEIKLLKCVRDGDVNDPYRER 133
           +++G G F TV+       V V        +PQ  +   +E+ +L+  R           
Sbjct: 30  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--------HVN 81

Query: 134 VVQLLDDFKICGV-NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
           ++  +      G      + +V +    + L   + +      ++ +  I RQ  +G++Y
Sbjct: 82  ILLFM------GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135

Query: 193 LHTKCRIIHTDIKPENVLLCVDE-----------ARVKTLALNATELAA 230
           LH K  IIH D+K  N+   + E           A  K+    + +   
Sbjct: 136 LHAK-SIIHRDLKSNNIF--LHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 58.3 bits (142), Expect = 3e-10
 Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 29/150 (19%)

Query: 76  NRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVR 122
             ++V   LG G F+ V+      TG         K   +      +   +E+K+   ++
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA-MYKAGMVQRVQNEVKIHCQLK 69

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRS 181
                 P    +++L + F+    +  +V +V E      + + +   + +       R 
Sbjct: 70  H-----PS---ILELYNYFE----DSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARH 116

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            + QI+ G+ YLH+   I+H D+   N+LL
Sbjct: 117 FMHQIITGMLYLHSH-GILHRDLTLSNLLL 145

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 35/167 (20%), Positives = 61/167 (36%), Gaps = 30/167 (17%)

Query: 68  VKIGMLFNNRYRVTRKLGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDV 126
           +K   + ++    ++ LG G    V      +TQ   +             LK ++  D 
Sbjct: 54  IKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFA-------------LKMLQ--DC 98

Query: 127 NDPYRE-----------RVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGI 174
               RE            +V+++D ++        + +V E L G  L   I     +  
Sbjct: 99  PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 158

Query: 175 PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL 221
                  I++ I + + YLH+   I H D+KPEN LL   +     L
Sbjct: 159 TEREASEIMKSIGEAIQYLHSI-NIAHRDVKPEN-LLYTSKRPNAIL 203

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 58.5 bits (142), Expect = 4e-10
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 23/154 (14%)

Query: 75  NNRYRVTRKLGWGHFSTVWF-----TGS----KTQVLVSPQFPETALDEIKLLKCVRDGD 125
           N  + +  +LG G F  V+      TG+    K     S +  E  + EI++L       
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILA-----T 72

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
            + PY   +V+LL  +     +   + ++ E      +  I+    RG+    ++ + RQ
Sbjct: 73  CDHPY---IVKLLGAY----YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           +L+ LN+LH+K RIIH D+K  NVL+   E  ++
Sbjct: 126 MLEALNFLHSK-RIIHRDLKAGNVLMT-LEGDIR 157

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 58.1 bits (141), Expect = 5e-10
 Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 31/162 (19%)

Query: 74  FNNRYRVTRK-LGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYR 131
             + Y+++++ LG G    V      +T    +             LK + D       +
Sbjct: 26  VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA-------------LKLLYD--SPKARQ 70

Query: 132 E-----------RVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENV 179
           E            +V +LD ++        + ++ E + G  L   I +   +       
Sbjct: 71  EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREA 130

Query: 180 RSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL 221
             I+R I   + +LH+   I H D+KPEN LL   + +   L
Sbjct: 131 AEIMRDIGTAIQFLHSH-NIAHRDVKPEN-LLYTSKEKDAVL 170

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 57.3 bits (139), Expect = 9e-10
 Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 30/151 (19%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVRD 123
           +Y +   LG G +  V       T          K ++   P        EI+LL+ +R 
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLG--HNLLKLIVKSKYRGIPLENVR 180
                     V+QL+D   +       + MV E  +     +L  + + +    P+    
Sbjct: 66  -----KN---VIQLVD--VLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR---FPVCQAH 112

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
               Q++ GL YLH++  I+H DIKP N+LL
Sbjct: 113 GYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLL 142

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 23/149 (15%)

Query: 80  VTRKLGWGHFSTVW---FTGSKTQV--LVSPQFPETALDEIKLLKCVRDGDVNDPYRERV 134
           V   +G G F  V    +      +  + S    +  + E++ L  V            +
Sbjct: 12  VEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNH--------PNI 63

Query: 135 VQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRG-IPLENVRSIIRQILQGLNY 192
           V+L       G     VC+V E   G +L  ++  ++        +  S   Q  QG+ Y
Sbjct: 64  VKLY------GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117

Query: 193 LHTKCR--IIHTDIKPENVLLCVDEARVK 219
           LH+     +IH D+KP N+LL      +K
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLK 146

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 51/202 (25%)

Query: 27  DNDYSLSDESHDEEENENKQFSSDEDEQE-DPNDYCKGGYHPVKIGMLFNNRYRVTRKLG 85
            + + +SD      EN   Q + D D+ +    D        + I            K+G
Sbjct: 5   HHHHPMSDYDIPTTENLYFQGAMDGDDMDIPWCD--------LNIK----------EKIG 46

Query: 86  WGHFSTVW---FTGS----KTQVLVSPQFPETALD----EIKLLKCVRDGDVNDPYRERV 134
            G F TV    + GS    K  +L+   F    ++    E+ ++K +R    N      +
Sbjct: 47  AGSFGTVHRAEWHGSDVAVK--ILMEQDFHAERVNEFLREVAIMKRLRH--PN------I 96

Query: 135 VQLLDDFKICGV--NGTHVCMVFEVL-GHNLLKLIVKSKYRG-IPLENVRSIIRQILQGL 190
           V  +      G      ++ +V E L   +L +L+ KS  R  +      S+   + +G+
Sbjct: 97  VLFM------GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150

Query: 191 NYLHT-KCRIIHTDIKPENVLL 211
           NYLH     I+H ++K  N+L+
Sbjct: 151 NYLHNRNPPIVHRNLKSPNLLV 172

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 23/153 (15%)

Query: 75  NNRYRVTRKLGWGHFSTVWFTGSKT--------QVLVSPQFPETALDEIKLLKCVRDGDV 126
              + V  KLG G + +V+    K         QV V     +  + EI +++       
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-LQEIIKEISIMQ-----QC 81

Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
           + P+   VV+    +       T + +V E  G   +  I++ + + +  + + +I++  
Sbjct: 82  DSPH---VVKYYGSY----FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQST 134

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           L+GL YLH   R IH DIK  N+LL   E   K
Sbjct: 135 LKGLEYLHFM-RKIHRDIKAGNILLN-TEGHAK 165

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 30/150 (20%)

Query: 76  NRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVR 122
             + + R LG G F  V+      +          K Q L           E+++   +R
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLR 67

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRS 181
                 P    +++L   F     + T V ++ E      + + + K        +   +
Sbjct: 68  H-----PN---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK--FDEQRTAT 113

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            I ++   L+Y H+K R+IH DIKPEN+LL
Sbjct: 114 YITELANALSYCHSK-RVIHRDIKPENLLL 142

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 55.5 bits (134), Expect = 4e-09
 Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 27/157 (17%)

Query: 75  NNRYRVTRKLGWGHFSTVWF-----TGSKT---QVLVSPQFPETALD----EIKLLKCVR 122
              +   R++G G F  V+F             ++  S +           E++ L+   
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ--- 109

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSI 182
              +  P     +Q    +    +      +V E    +   L+ +   + +    + ++
Sbjct: 110 --KLRHPN---TIQYRGCY----LREHTAWLVMEYCLGSASDLL-EVHKKPLQEVEIAAV 159

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
               LQGL YLH+   +IH D+K  N+LL  +   VK
Sbjct: 160 THGALQGLAYLHSH-NMIHRDVKAGNILLS-EPGLVK 194

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 27/147 (18%)

Query: 77  RYRVTRKLGWGHFSTVW-----FTGSK--TQVLVSPQFPETALD----EIKLLKCVRDGD 125
            YR+ + +G G+F+ V       TG +   +++   Q   T+L     E++++K +    
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH-- 73

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIR 184
              P    +V+L +  +        + ++ E   G  +   +V      +  +  RS  R
Sbjct: 74  ---PN---IVKLFEVIE----TEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFR 121

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           QI+  + Y H K  I+H D+K EN+LL
Sbjct: 122 QIVSAVQYCHQKR-IVHRDLKAENLLL 147

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 42/157 (26%)

Query: 74  FNNRYRVT---RKLGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDP 129
           F   Y +    + LG G FS        K+    +             +K +      + 
Sbjct: 6   FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFA-------------VKIISKRMEANT 52

Query: 130 YRE-----------RVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKY---RGI 174
            +E            +V+L + F     +  H  +V E + G  L + I K K+      
Sbjct: 53  QKEITALKLCEGHPNIVKLHEVFH----DQLHTFLVMELLNGGELFERIKKKKHFSET-- 106

Query: 175 PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
                  I+R+++  ++++H    ++H D+KPEN+L 
Sbjct: 107 ---EASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLF 139

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 55.1 bits (133), Expect = 6e-09
 Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 20/156 (12%)

Query: 75  NNRYRVTRKLGWGHFSTVWF-----TGSKT---QVLVSPQFPETALDEIKLLKCVRDGDV 126
              + +   +G G +  V+      TG       + V+    E    EI +LK       
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--- 79

Query: 127 NDPYRERVVQLLDDF--KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSII 183
                  +      F  K        + +V E     ++  LI  +K   +  E +  I 
Sbjct: 80  -HRN---IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           R+IL+GL++LH   ++IH DIK +NVLL  + A VK
Sbjct: 136 REILRGLSHLHQH-KVIHRDIKGQNVLLT-ENAEVK 169

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 30/150 (20%)

Query: 76  NRYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVR 122
           + + + R LG G F  V+                 K+Q L           EI++   +R
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLR 72

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRS 181
                 P    ++++ + F     +   + ++ E      L K + K        +   +
Sbjct: 73  H-----PN---ILRMYNYFH----DRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSAT 118

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            + ++   L+Y H + ++IH DIKPEN+L+
Sbjct: 119 FMEELADALHYCHER-KVIHRDIKPENLLM 147

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 54.6 bits (132), Expect = 6e-09
 Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 25/154 (16%)

Query: 75  NNRYRVTRKLGWGHFSTVWF---TGSKTQV------LVSPQFPETALDEIKLLKCVRDGD 125
             +Y    K+G G   TV+      +  +V      L      E  ++EI +++     +
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR-----E 73

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
             +P    +V  LD +    + G  + +V E L    L  +V      +    + ++ R+
Sbjct: 74  NKNPN---IVNYLDSY----LVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRE 124

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            LQ L +LH+  ++IH DIK +N+LL   +  VK
Sbjct: 125 CLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVK 156

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 54.9 bits (132), Expect = 7e-09
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 10/95 (10%)

Query: 159 GHNLLKLIVKSKYRG-IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR 217
             NL   + +              I  QI + + +LH+K  ++H D+KP N+   +D+  
Sbjct: 145 KENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDD-V 202

Query: 218 VK-------TLALNATELAATGHKLPVSFCSTAPV 245
           VK       T      E       +P     T  V
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 35/161 (21%)

Query: 82  RKLGWGHFSTVW---FTGS----KTQVLVSPQFPETALD----EIKLLKCVRDGDVNDPY 130
             +G G F  V+   + G     K       +     ++    E KL   ++        
Sbjct: 13  EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-------- 64

Query: 131 RERVVQLLDDFKICGV--NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQIL 187
              ++ L       GV     ++C+V E      L +++   +   IP + + +   QI 
Sbjct: 65  HPNIIALR------GVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIA 115

Query: 188 QGLNYLHTKC--RIIHTDIKPENVLLCVDEARVKTLALNAT 226
           +G+NYLH +    IIH D+K  N+L  + +        N  
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNIL--ILQKVENGDLSNKI 154

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 33/150 (22%)

Query: 80  VTRKLGWGHFSTVW---FTGSKTQV----LVSPQFPETALD---------EIKLLKCVRD 123
             +++G G F  V        K+ V    L+                   E+ ++  +  
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSI 182
                     +V+L       G+      MV E V   +L   ++   +  I       +
Sbjct: 83  --------PNIVKLY------GLMHNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVKLRL 127

Query: 183 IRQILQGLNYLHT-KCRIIHTDIKPENVLL 211
           +  I  G+ Y+      I+H D++  N+ L
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 34/146 (23%), Positives = 51/146 (34%), Gaps = 30/146 (20%)

Query: 82  RKLGWGHFSTVW-----FTGSKTQVLVSPQFPETALD----EIKLLKCVRDGDVNDPYRE 132
             LG G F          TG    +    +F E        E+K+++C+           
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH--------P 67

Query: 133 RVVQLLDDFKICGV--NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQG 189
            V++ +      GV      +  + E +    L  +I KS     P     S  + I  G
Sbjct: 68  NVLKFI------GVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASG 120

Query: 190 LNYLHTKCRIIHTDIKPENVLLCVDE 215
           + YLH    IIH D+   N L  V E
Sbjct: 121 MAYLH-SMNIIHRDLNSHNCL--VRE 143

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 19/156 (12%)

Query: 73  LFNNRYRVTRKLGWGHF--------STVWFTGSKTQVLV--SPQFPETALDEIKLLKCVR 122
           +    ++V   +G G F        ++    GS    +V   P        E+K  +   
Sbjct: 32  MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAA 91

Query: 123 DGDVNDPYRERVVQLLD---DFKICGVNGT----HVCMVFEVLGHNLLKLIVKSKYRGIP 175
             +    +             +   G++      +  M+ +  G +L K+   +  +   
Sbjct: 92  KPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEAN-AKRFS 150

Query: 176 LENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            + V  +  +IL  L Y+H     +H DIK  N+LL
Sbjct: 151 RKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLL 185

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 43/157 (27%), Positives = 61/157 (38%), Gaps = 32/157 (20%)

Query: 67  PVKIGMLFNNRYRVTRKLGWGHFSTVWF-----TGSKT-------QVLVSPQFPETALDE 114
              IG      Y +   LG G F  V       T  K        Q+L           E
Sbjct: 5   KRHIG-----PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVERE 59

Query: 115 IKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGI 174
           I  LK +R      P+   +++L D         T + MV E  G  L   IV+ K   +
Sbjct: 60  ISYLKLLRH-----PH---IIKLYDVIT----TPTDIVMVIEYAGGELFDYIVEKKR--M 105

Query: 175 PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             +  R   +QI+  + Y H   +I+H D+KPEN+LL
Sbjct: 106 TEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLL 141

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 21/149 (14%), Positives = 46/149 (30%), Gaps = 33/149 (22%)

Query: 80  VTRKLGWGHFSTVW---FTGS----KTQVLVSPQFPETAL----DEIKLLKCVRDGDVND 128
              KL   H   +W   + G+    K  VL    +         +E   L+         
Sbjct: 14  FLTKLNENHSGELWKGRWQGNDIVVK--VLKVRDWSTRKSRDFNEECPRLRIFS------ 65

Query: 129 PYRERVVQLLDDFKICGV----NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSII 183
                V+ +L      G        H  ++   +   +L  ++ +     +         
Sbjct: 66  --HPNVLPVL------GACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA 117

Query: 184 RQILQGLNYLHT-KCRIIHTDIKPENVLL 211
             + +G+ +LHT +  I    +   +V++
Sbjct: 118 LDMARGMAFLHTLEPLIPRHALNSRSVMI 146

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.0 bits (127), Expect = 3e-08
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 15/107 (14%)

Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYR 172
           E+ + K       N P    +V     F    +    + +V   + + +   LI      
Sbjct: 76  ELHVSK-----LFNHPN---IVPYRATF----IADNELWVVTSFMAYGSAKDLICTHFMD 123

Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           G+    +  I++ +L+ L+Y+H     +H  +K  ++L+   + +V 
Sbjct: 124 GMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILIS-VDGKVY 168

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 52.8 bits (127), Expect = 4e-08
 Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 25/154 (16%)

Query: 75  NNRYRVTRKLGWGHFSTVW-----FTGS----KTQVLVSPQFPETALDEIKLLKCVRDGD 125
                   K+G G    V       +G     K   L   Q  E   +E+ +++     D
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMR-----D 98

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   VV++   +    + G  + ++ E L    L  IV      +  E + ++   
Sbjct: 99  YQHFN---VVEMYKSY----LVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEA 149

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           +LQ L YLH +  +IH DIK +++LL   + RVK
Sbjct: 150 VLQALAYLHAQ-GVIHRDIKSDSILLT-LDGRVK 181

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 4e-08
 Identities = 42/205 (20%), Positives = 69/205 (33%), Gaps = 56/205 (27%)

Query: 3   NKNQNSSSNYGGEYNYHN---KYNNRYDNDYSLSDESHD---EEENENKQFSSDEDEQED 56
            K    S+      +  +   +   + +N+Y+L    H    +  N  K F SD D    
Sbjct: 418 EKQPKEST-----ISIPSIYLELKVKLENEYAL----HRSIVDHYNIPKTFDSD-DLIPP 467

Query: 57  PND---YCKGGYHPVKIGM-----LFNNRY---R-VTRKLGWGHFSTVWF-TGSKTQVLV 103
             D   Y   G+H   I       LF   +   R + +K+   H ST W  +GS    L 
Sbjct: 468 YLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR--HDSTAWNASGSILNTL- 524

Query: 104 SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF-KICG---VNGTHVCMVFEVLG 159
                            + D   NDP  ER+V  + DF        +   +         
Sbjct: 525 --------QQLKFYKPYICD---NDPKYERLVNAILDFLPKIEENLICSKYTD------- 566

Query: 160 HNLLKLIVKSKYRGIPLENVRSIIR 184
             LL++ + ++   I  E  + + R
Sbjct: 567 --LLRIALMAEDEAIFEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 1e-07
 Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 59/303 (19%)

Query: 27  DNDY-----SLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVT 81
             +Y      +  E               +    D   + K   + V     +    +  
Sbjct: 88  RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK---YNVSRLQPYLKLRQAL 144

Query: 82  RKLGWGHFSTVW-FTGSKTQVLVSPQFPETALDE------------IKLLKCVRDGDVND 128
            +L       +    GS    +      +  L              + L  C     V +
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVAL----DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE 200

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRG--IPLENVRSIIRQI 186
             ++ + Q+  ++     + +++ +    +   L +L+    Y    + L NV++   + 
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN--AKA 258

Query: 187 LQGLNYLHTKCRIIHT--DIKPENVL-------LCVDEARV-----KTLALNATELAATG 232
               N     C+I+ T    +  + L       + +D   +     +  +L    L    
Sbjct: 259 WNAFNL---SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 233 HKLPVSFCSTAP---------VQEYSELSRRMSKNKKKKLKKKAKKENEML----MKQMK 279
             LP    +T P         +++              KL    +    +L     ++M 
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375

Query: 280 QSL 282
             L
Sbjct: 376 DRL 378

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 52.5 bits (126), Expect = 6e-08
 Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 33/159 (20%)

Query: 66  HPVKIGMLFNNRYRVTRKLGWGHFSTVWF-----TGSKT-------QVLVSPQFPETALD 113
             VKIG      Y +   LG G F  V       TG K        Q + S         
Sbjct: 11  GRVKIG-----HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRR 65

Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYR 172
           EI+ LK  R      P+   +++L           + + MV E V G  L   I K+   
Sbjct: 66  EIQNLKLFRH-----PH---IIKLYQVIS----TPSDIFMVMEYVSGGELFDYICKNGR- 112

Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +  +  R + +QIL G++Y H    ++H D+KPENVLL
Sbjct: 113 -LDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLL 149

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 51.4 bits (124), Expect = 7e-08
 Identities = 46/159 (28%), Positives = 61/159 (38%), Gaps = 33/159 (20%)

Query: 66  HPVKIGMLFNNRYRVTRKLGWGHFSTVWF-----TGSKT-------QVLVSPQFPETALD 113
             VKIG      Y +   LG G F  V       TG K        Q + S         
Sbjct: 6   GRVKIG-----HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60

Query: 114 EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYR 172
           EI+ LK  R      P+   +++L           T   MV E V G  L   I K    
Sbjct: 61  EIQNLKLFRH-----PH---IIKLYQVIS----TPTDFFMVMEYVSGGELFDYICKHGR- 107

Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +     R + +QIL  ++Y H    ++H D+KPENVLL
Sbjct: 108 -VEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLL 144

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 43/191 (22%)

Query: 39  EEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWF---- 94
                       ++ + DP +                  +    K+G G F  V+     
Sbjct: 2   AHSPVQSGLPGMQNLKADPEE-----------------LFTKLEKIGKGSFGEVFKGIDN 44

Query: 95  -TGSKT---QVLVSPQFPETAL--DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG 148
            T        + +     E      EI +L        + PY   V +    +    +  
Sbjct: 45  RTQKVVAIKIIDLEEAEDEIEDIQQEITVLS-----QCDSPY---VTKYYGSY----LKD 92

Query: 149 THVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPEN 208
           T + ++ E LG      +++     +    + +I+R+IL+GL+YLH++ + IH DIK  N
Sbjct: 93  TKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSE-KKIHRDIKAAN 149

Query: 209 VLLCVDEARVK 219
           VLL  +   VK
Sbjct: 150 VLLS-EHGEVK 159

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 33/162 (20%)

Query: 76  NRYRVTRKLGWGHFSTVWFTG--SKTQVLV---------SPQFPETALDEIKLLKCVRDG 124
           + Y +   +G G  + V      +  +  V              +  L EI+ +      
Sbjct: 15  DDYELQEVIGSGATAVV-QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMS----- 68

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN------ 178
             + P    +V     F    V    + +V ++L    +  I+K        ++      
Sbjct: 69  QCHHPN---IVSYYTSF----VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121

Query: 179 -VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            + +I+R++L+GL YLH     IH D+K  N+LL  ++  V+
Sbjct: 122 TIATILREVLEGLEYLHKN-GQIHRDVKAGNILLG-EDGSVQ 161

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 34/149 (22%), Positives = 52/149 (34%), Gaps = 32/149 (21%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVRD 123
            + + + LG G +  V       T            + +     PE    EI + K +  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNH 64

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSI 182
                     VV+     +     G    +  E   G  L   I      G+P  + +  
Sbjct: 65  -----EN---VVKFYGHRR----EGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRF 110

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             Q++ G+ YLH    I H DIKPEN+LL
Sbjct: 111 FHQLMAGVVYLHGI-GITHRDIKPENLLL 138

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 24/144 (16%)

Query: 77  RYRVTRKLGWGHFSTVWF---TGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVND 128
           RY   + +G G+F          +K  V V          E    EI   + +R      
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH----- 75

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
           P    +V+  +         TH+ ++ E   G  L + I          +  R   +Q+L
Sbjct: 76  PN---IVRFKEVIL----TPTHLAIIMEYASGGELYERICN--AGRFSEDEARFFFQQLL 126

Query: 188 QGLNYLHTKCRIIHTDIKPENVLL 211
            G++Y H+  +I H D+K EN LL
Sbjct: 127 SGVSYCHSM-QICHRDLKLENTLL 149

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 48.6 bits (116), Expect = 7e-07
 Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 20/116 (17%)

Query: 134 VVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
           ++  +          T + +V +   H +L   + +     + +E +  +      GL +
Sbjct: 98  ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAH 154

Query: 193 LHT-------KCRIIHTDIKPENVLLCVDE---------ARVKTLALNATELAATG 232
           LH        K  I H D+K +N+L+  +          A     A +  ++A   
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 48.3 bits (115), Expect = 9e-07
 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 13/88 (14%)

Query: 134 VVQLLD-DFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLN 191
           + + +  D ++         +V E   + +L K +           +   +   + +GL 
Sbjct: 69  IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLA 125

Query: 192 YLHT--------KCRIIHTDIKPENVLL 211
           YLHT        K  I H D+   NVL+
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLV 153

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 34/149 (22%), Positives = 52/149 (34%), Gaps = 32/149 (21%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TG--------SKTQVLVSPQFPETALDEIKLLKCVRD 123
            + + + LG G +  V       T            + +     PE    EI + K +  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNH 64

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSI 182
                     VV+     +     G    +  E   G  L   I      G+P  + +  
Sbjct: 65  -----EN---VVKFYGHRR----EGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRF 110

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             Q++ G+ YLH    I H DIKPEN+LL
Sbjct: 111 FHQLMAGVVYLHGI-GITHRDIKPENLLL 138

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 32/154 (20%)

Query: 82  RKLGWGHFSTVW-----FTGSKTQVLV---------SPQFPETALDEIKLLKCVRDGDVN 127
           R LG GHF  V       T   T  +V          PQ       EI +L+ +      
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH---- 92

Query: 128 DPYRERVVQLLDDFKICGVNGTH-VCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQ 185
               E +++       C   G   + +V E +   +L   + +     I L  +    +Q
Sbjct: 93  ----EHIIKYK---GCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQ 142

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           I +G+ YLH +   IH D+   NVLL  ++  VK
Sbjct: 143 ICEGMAYLHAQ-HYIHRDLAARNVLL-DNDRLVK 174

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 46.8 bits (110), Expect = 3e-06
 Identities = 31/181 (17%), Positives = 48/181 (26%), Gaps = 50/181 (27%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLV----------------SPQFPETALDEIKLLK 119
            + +   K+G G F  V F        V                  +  E  L EI + K
Sbjct: 20  EKLQRCEKIGEGVFGEV-FQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 78

Query: 120 CVRDGDVNDPYRERVVQLLDDFKIC-----------------------------GVNGTH 150
            +         R      L+                                    +   
Sbjct: 79  ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 138

Query: 151 VCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
           + + FE  G +L ++  K       L   +SI+ Q+   L       R  H D+   NVL
Sbjct: 139 IVLEFEFGGIDLEQMRTKLS----SLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVL 194

Query: 211 L 211
           L
Sbjct: 195 L 195

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 36/157 (22%)

Query: 82  RKLGWGHFSTVW-----FTGSKTQVLV---------SPQFPETALDEIKLLKCVRDGDVN 127
           R LG GHF  V        G  T   V                   EI++L+ +      
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH---- 82

Query: 128 DPYRERVVQLLDDFKICGV----NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSI 182
               E +V+        G+     G  + ++ E L   +L + + K+K + I L+     
Sbjct: 83  ----ENIVKYK------GICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKY 131

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
             QI +G++YL ++ + +H D+   NVL+   E +VK
Sbjct: 132 AVQICKGMDYLGSR-QYVHRDLAARNVLV-ESEHQVK 166

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 20/101 (19%)

Query: 149 THVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-------KCRII 200
           T + ++ +   + +L   +   K   +  +++  +    + GL +LHT       K  I 
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164

Query: 201 HTDIKPENVLLCVDE---------ARVKTLALNATELAATG 232
           H D+K +N+L+  +          A       N  ++    
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 82  RKLGWGHFSTVW-----FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDGDVND 128
            +LG G+F +V        G  T  LV         P        EI++LK +       
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS----- 83

Query: 129 PYRERVVQLLDDFKICGVNGTH-VCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQI 186
              + +V+      +    G   + +V E L    L   + + + R +    +     QI
Sbjct: 84  ---DFIVKYR---GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 136

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            +G+ YL ++ R +H D+   N+L+   EA VK
Sbjct: 137 CKGMEYLGSR-RCVHRDLAARNILV-ESEAHVK 167

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 46/215 (21%)

Query: 20  NKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYR 79
           + Y++ + +DY +    +   +        D D  +    +       +K          
Sbjct: 2   SYYHHHHHHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERH-------LKFL-------- 46

Query: 80  VTRKLGWGHFSTVW-----FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDGDV 126
             ++LG G+F +V           T  +V        + +       EI++LK ++    
Sbjct: 47  --QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH--- 101

Query: 127 NDPYRERVVQLLDDFKICGVNGTH-VCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIR 184
                + +V+      +C   G   + ++ E L + +L   + K K R I    +     
Sbjct: 102 -----DNIVKYK---GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTS 152

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           QI +G+ YL TK R IH D+   N+L+  +E RVK
Sbjct: 153 QICKGMEYLGTK-RYIHRDLATRNILV-ENENRVK 185

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 134 VVQLLDDFKICGVNGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNY 192
           ++  +        + T + ++       +L   +  +    +   +   I+  I  GL +
Sbjct: 64  ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAH 120

Query: 193 LHT-------KCRIIHTDIKPENVLLCVDE-----------ARVKTLALNATELAATG 232
           LH        K  I H D+K +N+L  V +           A + + + N  ++    
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNIL--VKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 29/153 (18%)

Query: 82  RKLGWGHFSTVW-----FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDGDVND 128
           ++LG G+F +V           T  +V        + +       EI++LK ++      
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH----- 70

Query: 129 PYRERVVQLLDDFKICGVNGTH-VCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQI 186
              + +V+      +C   G   + ++ E L + +L   + K K R I    +     QI
Sbjct: 71  ---DNIVKYK---GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 123

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            +G+ YL TK R IH D+   N+L+  +E RVK
Sbjct: 124 CKGMEYLGTK-RYIHRDLATRNILV-ENENRVK 154

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 17/109 (15%)

Query: 115 IKLLK---CVRDGDVNDPYRERVVQLLDDFK---ICGVNGT-----HVCMVFE-VLGHNL 162
           +K +    CV   +V + ++E   Q++   +   +  +  +      + MV + +LG +L
Sbjct: 45  MKYMNKQKCVERNEVRNVFKEL--QIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL 102

Query: 163 LKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
              +   +      E V+  I +++  L+YL  + RIIH D+KP+N+LL
Sbjct: 103 RYHL--QQNVHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILL 148

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 43/221 (19%), Positives = 78/221 (35%), Gaps = 53/221 (23%)

Query: 5   NQNSSSNYGGEYNYHNKYNNRYDNDYSLSDESHDEEENENKQFSSDEDEQEDPNDYCKGG 64
           N +  +         +K      +         D EE ++K+     D            
Sbjct: 288 NSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLL--------- 338

Query: 65  YHPVKIGMLFNNRYRVTRKLGWGHFSTVW---FTGSKTQVLV---------SPQFPETAL 112
                             +LG G+F +V    +   K Q+ V              E  +
Sbjct: 339 --------------IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM 384

Query: 113 DEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSK 170
            E +++       +++PY   +V+L+      GV     + +V E+ G   L K +V  +
Sbjct: 385 REAQIMH-----QLDNPY---IVRLI------GVCQAEALMLVMEMAGGGPLHKFLVGKR 430

Query: 171 YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
              IP+ NV  ++ Q+  G+ YL  K   +H ++   NVLL
Sbjct: 431 EE-IPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLL 469

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)

Query: 189 GLNYLHTKC--RIIHTDIKPENVLL 211
           GL YLH  C  +IIH D+K  N+LL
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILL 167

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 32/147 (21%)

Query: 80  VTRKLGWGHFSTVW---FTGSKTQVLV----------SPQFPETALDEIKLLKCVRDGDV 126
             ++LG G+F TV    +   K    V           P   +  L E  +++ + +   
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN--- 77

Query: 127 NDPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIR 184
                  +V+++      G+       +V E+     L K + ++++  +  +N+  ++ 
Sbjct: 78  -----PYIVRMI------GICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVH 124

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           Q+  G+ YL      +H D+   NVLL
Sbjct: 125 QVSMGMKYLEES-NFVHRDLAARNVLL 150

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 41/183 (22%)

Query: 79  RVTRKLGWGHFSTVW-----FTGSKTQVLV---------SPQFPETALDEIKLLKCVRDG 124
           +  + LG G F TV+       G K ++ V         SP+  +  LDE  ++      
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA----- 72

Query: 125 DVNDPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSI 182
            V++P+   V +LL      G+   + V ++ +++    LL  + + K   I  + + + 
Sbjct: 73  SVDNPH---VCRLL------GICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNW 122

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK--------TLALNATELAATGHK 234
             QI +G+NYL  + R++H D+   NVL+      VK         L     E  A G K
Sbjct: 123 CVQIAKGMNYLEDR-RLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180

Query: 235 LPV 237
           +P+
Sbjct: 181 VPI 183

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 27/145 (18%)

Query: 79  RVTRKLGWGHFSTVW---FTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVND 128
            +  ++G G+F  V+        T V V        P      L E ++LK         
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH----- 171

Query: 129 PYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
                +V+L+      GV      + +V E++        ++++   + ++ +  ++   
Sbjct: 172 ---PNIVRLI------GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLL 211
             G+ YL +K   IH D+   N L+
Sbjct: 223 AAGMEYLESK-CCIHRDLAARNCLV 246

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 149 THVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
            ++ +V E  +G +LL L+ K   R IP E  R  + +I+  ++ +H     +H DIKP+
Sbjct: 134 NYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPD 191

Query: 208 NVLL 211
           N+LL
Sbjct: 192 NILL 195

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 42.9 bits (101), Expect = 7e-05
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 149 THVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
             +C+V   + G +L   I      G P         +I  GL  LH + RI++ D+KPE
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPE 315

Query: 208 NVLL 211
           N+LL
Sbjct: 316 NILL 319

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 188 QGLNYLHTKCRIIHTDIKPENVLL 211
           +GL+YLHT+  IIH D+K  N+LL
Sbjct: 150 RGLHYLHTRA-IIHRDVKSINILL 172

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 43/181 (23%)

Query: 82  RKLGWGHFSTVW-------FTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVN 127
           + LG G F TV            K  V +         Q  +   D +  +       ++
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG-----SLD 73

Query: 128 DPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQ 185
             +   +V+LL      G+  G+ + +V + L   +LL  + + +   +  + + +   Q
Sbjct: 74  HAH---IVRLL------GLCPGSSLQLVTQYLPLGSLLDHVRQHRGA-LGPQLLLNWGVQ 123

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV---------KTLALNATELAATGHKLP 236
           I +G+ YL     ++H ++   NVL  +                L  +  +L  +  K P
Sbjct: 124 IAKGMYYLEEH-GMVHRNLAARNVL--LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180

Query: 237 V 237
           +
Sbjct: 181 I 181

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 11/30 (36%), Positives = 22/30 (73%)

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +I+  L+YLH++  +++ D+K EN++L  D
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKD 285

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 174 IPLENVRSIIRQILQGLNYLHT---------KCRIIHTDIKPENVLL 211
           +    +  I   + +GL YLH          K  I H DIK +NVLL
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL 164

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 38/185 (20%)

Query: 79  RVTRKLGWGHFSTVW---FTGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVNDPY 130
            +  KLG G +  V+   +      V V          E  L E  ++K ++        
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH------- 275

Query: 131 RERVVQLLDDFKICGV--NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQIL 187
              +VQLL      GV        ++ E + + NLL  + +   + +    +  +  QI 
Sbjct: 276 -PNLVQLL------GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA--------LNATELAATGHKLPVSF 239
             + YL  K   IH ++   N L  V E  +  +A           T  A  G K P+ +
Sbjct: 329 SAMEYLEKK-NFIHRNLAARNCL--VGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 385

Query: 240 CSTAP 244
             TAP
Sbjct: 386 --TAP 388

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 3/64 (4%)

Query: 149 THVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
            ++ +V +  +G +LL L+ K + R +P E  R  + +++  ++ +H     +H DIKP+
Sbjct: 147 NNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPD 204

Query: 208 NVLL 211
           N+L+
Sbjct: 205 NILM 208

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 13/104 (12%)

Query: 109 ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIV 167
             AL+E  +L  V  GD   P+   +V +   F         +  + +++ G +L   + 
Sbjct: 234 TLALNERIMLSLVSTGD--CPF---IVCMSYAFH----TPDKLSFILDLMNGGDLHYHL- 283

Query: 168 KSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
            S++      ++R    +I+ GL ++H +  +++ D+KP N+LL
Sbjct: 284 -SQHGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILL 325

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 149 THVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
            ++ MV E + G +L+ L+  S Y  +P +  R    +++  L+ +H     IH D+KP+
Sbjct: 142 RYLYMVMEYMPGGDLVNLM--SNYD-VPEKWARFYTAEVVLALDAIH-SMGFIHRDVKPD 197

Query: 208 NVLL 211
           N+LL
Sbjct: 198 NMLL 201

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 149 THVCMVFE-VLGHNLLKLI--VKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK 205
           T +C+V   + G ++   I  V     G           QI+ GL +LH +  II+ D+K
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLK 316

Query: 206 PENVLL 211
           PENVLL
Sbjct: 317 PENVLL 322

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 40.2 bits (95), Expect = 4e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVD 214
            G+N+LH     IH DIK  N+LL   
Sbjct: 144 NGINFLHENH-HIHRDIKSANILLDEA 169

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           +I+  L YLH K  IIH D+KPEN+LL
Sbjct: 138 EIVSALEYLHGK-GIIHRDLKPENILL 163

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 34/150 (22%), Positives = 57/150 (38%), Gaps = 33/150 (22%)

Query: 79  RVTRKLGWGHFSTVW------FTGSKTQVLV---------SPQFPETALDEIKLLKCVRD 123
           R+  KLG G F  V        +G    V V          P+  +  + E+  +  +  
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80

Query: 124 GDVNDPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRS 181
                     +++L       GV     + MV E+    +LL  + K +     L  +  
Sbjct: 81  --------RNLIRLY------GVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSR 125

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
              Q+ +G+ YL +K R IH D+   N+LL
Sbjct: 126 YAVQVAEGMGYLESK-RFIHRDLAARNLLL 154

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 36/195 (18%)

Query: 33  SDESHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTV 92
            D    E         S  +E+++  +  + G     +G+     + + R +G G ++ V
Sbjct: 12  YDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGL---QDFDLLRVIGRGSYAKV 68

Query: 93  WFTGSK-TQVLVSPQFPETALDEIKLLK---CVRDGDVNDPYRER-----------VVQL 137
                K T  + +          ++++K      D D++    E+           +V L
Sbjct: 69  LLVRLKKTDRIYA----------MRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118

Query: 138 LDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTK 196
              F+      + +  V E V G +L+  +   + R +P E+ R    +I   LNYLH +
Sbjct: 119 HSCFQ----TESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHER 172

Query: 197 CRIIHTDIKPENVLL 211
             II+ D+K +NVLL
Sbjct: 173 -GIIYRDLKLDNVLL 186

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 30/144 (20%)

Query: 82  RKLGWGHFSTVW-----FTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVNDP 129
            +LG G+F +V          +  V +            E  + E +++  + +      
Sbjct: 16  IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN------ 69

Query: 130 YRERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQIL 187
               +V+L+      GV     + +V E+ G   L K +V  +   IP+ NV  ++ Q+ 
Sbjct: 70  --PYIVRLI------GVCQAEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVS 120

Query: 188 QGLNYLHTKCRIIHTDIKPENVLL 211
            G+ YL  K   +H D+   NVLL
Sbjct: 121 MGMKYLEEK-NFVHRDLAARNVLL 143

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 39.7 bits (93), Expect = 8e-04
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 26/147 (17%)

Query: 76  NRYRVT--RKLGWGHFSTVWFTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDV 126
            R  +   +KLG G F  VW         V            E  L E  ++K ++    
Sbjct: 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH--- 242

Query: 127 NDPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIR 184
                +++V+L        V     + ++ E +   +LL  +   +    PL  +     
Sbjct: 243 -----DKLVKLH------AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
           QI +G+ ++  +   IH D++  N+L+
Sbjct: 292 QIAEGMAFIEQR-NYIHRDLRAANILV 317

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 41/180 (22%)

Query: 82  RKLGWGHFSTVW-----FTGSKTQVLV---------SPQFPETALDEIKLLKCVRDGDVN 127
           + LG G F TV+       G K ++ V         SP+  +  LDE  ++       V+
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA-----SVD 75

Query: 128 DPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQ 185
           +P+   V +LL      G+   + V ++ +++    LL  + + K   I  + + +   Q
Sbjct: 76  NPH---VCRLL------GICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK--------TLALNATELAATGHKLPV 237
           I +G+NYL  + R++H D+   NVL+      VK         L     E  A G K+P+
Sbjct: 126 IAKGMNYLEDR-RLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 24/142 (16%)

Query: 79  RVTRKLGWGHFSTVWFTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVNDPYR 131
           R+  KLG G F  VW         V           PE  L E +++K +R         
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-------- 238

Query: 132 ERVVQLLDDFKICGV-NGTHVCMVFEVLGH-NLLKLIVKSKYRGIPLENVRSIIRQILQG 189
           E++VQL        V +   + +V E +   +LL  +     + + L  +  +  QI  G
Sbjct: 239 EKLVQLY------AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292

Query: 190 LNYLHTKCRIIHTDIKPENVLL 211
           + Y+      +H D++  N+L+
Sbjct: 293 MAYVERM-NYVHRDLRAANILV 313

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 39.1 bits (92), Expect = 9e-04
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 149 THVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE 207
            ++  V E + G +L+  I         L        +I+ GL +LH+K  I++ D+K +
Sbjct: 91  ENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLD 147

Query: 208 NVLL 211
           N+LL
Sbjct: 148 NILL 151

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	284
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.96
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.96
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.96
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.96
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.96
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.96
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.96
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.96
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.96
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.96
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.96
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.96
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.96
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.96
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.96
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.95
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.95
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.95
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.95
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.95
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.95
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.95
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.95
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.95
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.95
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.95
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.95
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.95
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.95
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.95
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.95
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.95
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.95
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.95
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.95
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.95
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.95
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.95
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.95
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.95
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.95
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.95
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.94
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.94
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.94
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.94
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.94
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.94
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.94
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.94
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.94
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.94
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.94
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.94
3bhy_A	283	Death-associated protein kinase 3; death associate	99.94
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.94
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.94
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.94
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.94
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.94
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.94
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.94
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.94
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.94
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.94
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.94
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.94
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.94
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.94
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.94
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.94
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.94
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.94
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.94
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.94
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.94
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.94
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.94
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.94
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.94
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.94
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.94
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.94
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.94
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.94
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.94
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.94
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.94
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.93
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.93
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.93
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.93
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.93
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.93
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.93
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.93
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.93
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.93
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.93
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.93
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.93
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.93
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.93
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.93
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.93
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.93
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.93
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.93
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.92
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.92
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.92
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.92
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.91
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.91
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.9
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.85
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.8
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.68
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.23
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.04
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.03
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.65
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.62
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.52
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.03
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.99
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.92
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.79
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.66
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.46
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.23
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.02
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.93
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.57
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.49
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.35
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.36
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	93.78
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	91.77
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	90.79
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	90.68
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	89.81
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	87.82
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	84.52
3mes_A	424	Choline kinase; malaria, structural genomics, stru	80.36

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.2e-38  Score=277.73  Aligned_cols=164  Identities=23%  Similarity=0.305  Sum_probs=140.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..       ...+.+.+|+.+|+.++|        |||++++++|+ 
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~l~~~~~-  102 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH--------PFFVKLYFTFQ-  102 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC--------TTBCCEEEEEE-
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEEE-
Confidence            46999999999999999999863     4666532       234568899999999998        77999999988 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +...+||||||+ +|+|.+.+.+..  .+++..++.|+.||+.||.|||++ |||||||||+||||+. ++.+||+|
T Consensus       103 ---~~~~~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~-~g~vKl~D  175 (311)
T 4aw0_A          103 ---DDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNE-DMHIQITD  175 (311)
T ss_dssp             ---CSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TSCEEECC
T ss_pred             ---eCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcC-CCCEEEEE
Confidence               888999999999 789999887764  599999999999999999999999 9999999999999955 48999999


Q ss_pred             ccchhHhhhCC--CCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGH--KLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+|+......  ....+++||+.|||||++.+.-
T Consensus       176 FGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~  210 (311)
T 4aw0_A          176 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS  210 (311)
T ss_dssp             CTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSC
T ss_pred             cCCceecCCCCCcccccCcccCcccCCHHHHcCCC
Confidence            99998765332  3455789999999999997653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=3.9e-39  Score=285.13  Aligned_cols=166  Identities=20%  Similarity=0.258  Sum_probs=134.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++++.||+|+||+||+|.++     +++|+....      .+.+.+|+.+|+.++|        +||++++++|.  
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H--------pnIV~~~~~~~--   93 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH--------PNIVQYRESFE--   93 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE--
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCC--------CCCCcEEEEEE--
Confidence            47999999999999999999863     466654321      2457899999999998        77999999887  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+||||||+ +|+|.+++.......+++..++.|+.||+.||.|||++ |||||||||+||||+.+ +.+||+||
T Consensus        94 --~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~-g~vKl~DF  169 (350)
T 4b9d_A           94 --ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKD-GTVQLGDF  169 (350)
T ss_dssp             --ETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTT-CCEEECST
T ss_pred             --ECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCC-CCEEEccc
Confidence              788999999999 78999999876655689999999999999999999999 99999999999999554 89999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |+|+..........+.+||+.|||||++.+.-
T Consensus       170 Gla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~  201 (350)
T 4b9d_A          170 GIARVLNSTVELARACIGTPYYLSPEICENKP  201 (350)
T ss_dssp             TEESCCCHHHHHHHHHHSCCTTCCHHHHTTCC
T ss_pred             ccceeecCCcccccccCCCccccCHHHHCCCC
Confidence            99986654433344678999999999998753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.7e-38  Score=278.43  Aligned_cols=162  Identities=23%  Similarity=0.316  Sum_probs=139.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEec----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ..|+++++||+|+||+||+|.++     +++|+.    ....+.+.+|+.+|+.++|        +||++++++|.    
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H--------pnIV~l~~~~~----  141 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH--------ENVVEMYNSYL----  141 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCC--------TTBCCEEEEEE----
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCC--------CCCCcEEEEEE----
Confidence            46999999999999999999873     355553    2335668899999999998        77999999888    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+||||||+ +|+|.+.+.+.   ++++..++.|+.||+.||.|||++ |||||||||+||||+.+ +.+||+|||+
T Consensus       142 ~~~~~~ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~-g~vKl~DFGl  216 (346)
T 4fih_A          142 VGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHD-GRVKLSDFGF  216 (346)
T ss_dssp             ETTEEEEEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT-CCEEECCCTT
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCC-CCEEEecCcC
Confidence            778999999999 66777776543   499999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |...........+.+||+.|||||++.+.
T Consensus       217 a~~~~~~~~~~~~~~GTp~YmAPEvl~~~  245 (346)
T 4fih_A          217 CAQVSKEVPRRKSLVGTPYWMAPELISRL  245 (346)
T ss_dssp             CEECCSSSCCBCCCCSCGGGCCHHHHTTC
T ss_pred             ceecCCCCCcccccccCcCcCCHHHHCCC
Confidence            98777666666788999999999999764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.6e-38  Score=270.11  Aligned_cols=164  Identities=24%  Similarity=0.441  Sum_probs=127.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||+||+|.++     +++|+...       ....+.+|+.+++.++|        |||+++++++. 
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~H--------pnIv~~~~~~~-   83 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH--------PHIIKLYDVIK-   83 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCC--------TTBCCEEEEEE-
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCC--------CCCCeEEEEEE-
Confidence            46999999999999999999863     35555321       23457899999999998        77999999887 


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                         ....+||||||++|+|++.+.+..  .+++..++.++.||+.||.|||++ |||||||||+|||++. ++.++|+||
T Consensus        84 ---~~~~~~ivmEy~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~-~~~vkl~DF  156 (275)
T 3hyh_A           84 ---SKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDE-HLNVKIADF  156 (275)
T ss_dssp             ---CSSEEEEEEECCCEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECT-TCCEEECCS
T ss_pred             ---ECCEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECC-CCCEEEeec
Confidence               788999999999999999987654  599999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      |+|...... ....+.+||+.|||||++.+.-.
T Consensus       157 Gla~~~~~~-~~~~~~~GT~~Y~APE~~~~~~y  188 (275)
T 3hyh_A          157 GLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLY  188 (275)
T ss_dssp             SCC----------------CTTSCHHHHSSSSC
T ss_pred             CCCeecCCC-CccCCeeECcccCChhhhcCCCC
Confidence            999866543 34457899999999999987643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.2e-37  Score=269.70  Aligned_cols=172  Identities=23%  Similarity=0.336  Sum_probs=140.2

Q ss_pred             cceeccce-EEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         71 GMLFNNRY-RVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        71 ~~~~~~~y-~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +...+++| ++.++||+|+||+||+|.++     +++|....      ..+.+.+|+.+++.++|        |||++++
T Consensus        20 ~~~~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H--------pnIV~~~   91 (290)
T 3fpq_A           20 GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH--------PNIVRFY   91 (290)
T ss_dssp             EECTTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCC--------TTBCCEE
T ss_pred             CcCCCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC--------CCCCcEE
Confidence            34444566 78889999999999999873     34444321      12457899999999998        7799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCeeEeeCC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVLLCVDE  215 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIll~~~~  215 (284)
                      ++|.........+||||||+ +|+|.+++.+..  .+++..++.|+.||+.||.|||++ +  ||||||||+||||+..+
T Consensus        92 ~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~  168 (290)
T 3fpq_A           92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPT  168 (290)
T ss_dssp             EEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTT
T ss_pred             EEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCC
Confidence            98875555567899999999 788888887654  599999999999999999999999 8  99999999999996556


Q ss_pred             CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        216 ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +.+||+|||+|+....  ....+.+||+.|||||++.++.
T Consensus       169 g~vKl~DFGla~~~~~--~~~~~~~GTp~YmAPE~~~~~y  206 (290)
T 3fpq_A          169 GSVKIGDLGLATLKRA--SFAKAVIGTPEFMAPEMYEEKY  206 (290)
T ss_dssp             SCEEECCTTGGGGCCT--TSBEESCSSCCCCCGGGGGTCC
T ss_pred             CCEEEEeCcCCEeCCC--CccCCcccCccccCHHHcCCCC
Confidence            8999999999975432  3445789999999999997653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=281.50  Aligned_cols=162  Identities=23%  Similarity=0.316  Sum_probs=139.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEec----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .+|++++.||+|+||+||+|.++     +++|+.    ....+.+.+|+.+|+.++|        +||++++++|.    
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H--------pnIV~l~~~~~----  218 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH--------ENVVEMYNSYL----  218 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCC--------TTBCCEEEEEE----
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCC--------CCCCceEEEEE----
Confidence            46999999999999999999873     355553    2234568899999999998        77999999988    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+||||||| +|+|.+++...   ++++..+..|+.||+.||.|||++ |||||||||+||||+.+ +.+||+|||+
T Consensus       219 ~~~~~~iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~-g~vKl~DFGl  293 (423)
T 4fie_A          219 VGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHD-GRVKLSDFGF  293 (423)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTT-CCEEECCCTT
T ss_pred             ECCEEEEEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCC-CCEEEecCcc
Confidence            778999999999 67777766543   499999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |...........+.+||+.|||||++.+.
T Consensus       294 a~~~~~~~~~~~~~~GTp~YmAPEvl~~~  322 (423)
T 4fie_A          294 CAQVSKEVPRRKSLVGTPYWMAPELISRL  322 (423)
T ss_dssp             CEECCSSCCCBCCCEECTTTCCHHHHTTC
T ss_pred             ceECCCCCccccccccCcCcCCHHHHCCC
Confidence            98877666666788999999999999765

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5e-38  Score=273.49  Aligned_cols=164  Identities=23%  Similarity=0.336  Sum_probs=132.4

Q ss_pred             cceEEEEEecccCceeEEEecc--------eeEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS--------KTQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~--------~~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ++|++++.||+|+||+||+|++        .+++|+...      ....+.+|+.+++.++|        |||++++++|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~l~~~~   95 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH--------PFIVKLHYAF   95 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCC--------TTEECEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCC--------CCCCeEEEEE
Confidence            3699999999999999999965        135554322      23457889999999988        7799999988


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    ....+||||||+ +|+|.+.+.+..  .+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|
T Consensus        96 ~----~~~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~-g~vKl  167 (304)
T 3ubd_A           96 Q----TEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEE-GHIKL  167 (304)
T ss_dssp             E----ETTEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTT-SCEEE
T ss_pred             E----ECCEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCC-CCEEe
Confidence            7    788999999999 789999887764  599999999999999999999999 99999999999999554 89999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|||+|+..........+.+||+.|||||++.+.-
T Consensus       168 ~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~  202 (304)
T 3ubd_A          168 TDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG  202 (304)
T ss_dssp             ESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSC
T ss_pred             cccccceeccCCCccccccccCcccCCHHHhccCC
Confidence            99999987766656667889999999999997653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.1e-37  Score=271.74  Aligned_cols=164  Identities=24%  Similarity=0.298  Sum_probs=135.1

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      +.|++.++||+|+||+||+|.++     +++|+... .....+|+.+++.++|        |||+++++++.    ....
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~-~~~~~~E~~il~~l~H--------pnIV~l~~~~~----~~~~  124 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFRVEELVACAGLSS--------PRIVPLYGAVR----EGPW  124 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEET-TTCCTHHHHTTTTCCC--------TTBCCEEEEEE----ETTE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECH-HHhHHHHHHHHHhCCC--------CCCCcEEEEEE----ECCE
Confidence            35999999999999999999873     46665533 2334679999999988        77999999887    7789


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      +||||||+ +|+|.+++.+..  .+++..++.|+.||+.||.|||++ |||||||||+||||+.++..+||+|||+|+..
T Consensus       125 ~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~  201 (336)
T 4g3f_A          125 VNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCL  201 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred             EEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence            99999999 789998887654  599999999999999999999999 99999999999999766557999999999865


Q ss_pred             hhCCC-----CCCcccCCCCccchhhhhhcc
Q psy16752        230 ATGHK-----LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       230 ~~~~~-----~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      .....     ...+++||+.|||||++.+.-
T Consensus       202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~  232 (336)
T 4g3f_A          202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKP  232 (336)
T ss_dssp             ------------CCCCCCGGGCCHHHHTTCC
T ss_pred             cCCCcccceecCCccccCccccCHHHHCCCC
Confidence            44321     223568999999999998753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-35  Score=259.26  Aligned_cols=163  Identities=19%  Similarity=0.258  Sum_probs=129.5

Q ss_pred             cceEEEEEecccCceeEEEecce--eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      +++++.++||+|+||+||+|.++  +++|+....      .+.+.+|+.++++++|        +||+++++++.     
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~H--------pNIV~l~g~~~-----  102 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH--------VNILLFMGYMT-----  102 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEC-----
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEE-----
Confidence            46899999999999999999874  355554322      2457899999999998        77999998653     


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      .+.+||||||+ +|+|.+.+.... ..+++..+..|+.||+.||.|||++ +||||||||+||||+. ++.+||+|||+|
T Consensus       103 ~~~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~-~~~~Ki~DFGla  179 (307)
T 3omv_A          103 KDNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHE-GLTVKIGDFGLA  179 (307)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEET-TEEEEECCCSSC
T ss_pred             CCeEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECC-CCcEEEeeccCc
Confidence            35689999999 788888886543 3599999999999999999999999 9999999999999954 489999999999


Q ss_pred             hHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +......  ....+.+||+.|||||++.+.
T Consensus       180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~  209 (307)
T 3omv_A          180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ  209 (307)
T ss_dssp             BC------------CCCCTTSCCHHHHHCC
T ss_pred             eecccCCcceeecccccCCCccCHHHhhcc
Confidence            8654322  234467899999999999643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.5e-35  Score=258.07  Aligned_cols=169  Identities=17%  Similarity=0.214  Sum_probs=124.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++++.||+|+||+||+|.++     +++|+...     ..+.+.+|+.+|+.++|        |||++++++|....
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~H--------pnIV~~~~~~~~~~   76 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH--------PGIVRYFNAWLEKN   76 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEEEEC
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEEEecC
Confidence            35999999999999999999863     35554322     12457889999999998        77999999876332


Q ss_pred             c--------CCeEEEEEeccC-CccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        146 V--------NGTHVCMVFEVL-GHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       146 ~--------~~~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      .        ...++||||||+ +|+|.+.+..... ...++..++.++.||+.||.|||++ |||||||||+||||+.+ 
T Consensus        77 ~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NILl~~~-  154 (299)
T 4g31_A           77 TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMD-  154 (299)
T ss_dssp             ----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT-
T ss_pred             ccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeEECCC-
Confidence            1        345689999999 7788888865432 2245677899999999999999999 99999999999999655 


Q ss_pred             CcEEEEeccchhHhhhCCC------------CCCcccCCCCccchhhhhhc
Q psy16752        216 ARVKTLALNATELAATGHK------------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~------------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.+||+|||+|+.......            ...+.+||+.|||||++.+.
T Consensus       155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  205 (299)
T 4g31_A          155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN  205 (299)
T ss_dssp             CCEEECCCCCC--------------------------CCCTTSCHHHHTTC
T ss_pred             CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC
Confidence            8999999999986654321            12356899999999999875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-35  Score=266.23  Aligned_cols=168  Identities=21%  Similarity=0.375  Sum_probs=137.2

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++++.||+|+||+||+|.++     +++|+....      .+.+.+|+.+|+.++|        +||+++++.+..
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--------pnIv~l~~~~~~  124 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH--------DNIIAIKDILRP  124 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCC--------TTBCCEEEECCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCC--------CCcceEeeeeec
Confidence            457999999999999999999873     466664332      2446789999999998        679999987652


Q ss_pred             e--ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 C--GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~--~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      .  ......+||||||++|+|++.+....  .+++..++.++.||+.||.|||++ |||||||||+|||++. .+.++|+
T Consensus       125 ~~~~~~~~~~~ivmE~~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~-~~~~Ki~  200 (398)
T 4b99_A          125 TVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNE-NCELKIG  200 (398)
T ss_dssp             SSCTTTCCCEEEEEECCSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECT-TCCEEEC
T ss_pred             ccccccCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCC-CCCEEEe
Confidence            2  12457899999999999999887643  699999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhC----CCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATG----HKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~----~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|+.....    .....+.+||+.|||||++.+.
T Consensus       201 DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~  237 (398)
T 4b99_A          201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL  237 (398)
T ss_dssp             CCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTC
T ss_pred             ecceeeecccCccccccccccceeChHhcCHHHhcCC
Confidence            99999865432    2334578999999999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.6e-35  Score=255.50  Aligned_cols=166  Identities=19%  Similarity=0.236  Sum_probs=135.2

Q ss_pred             ccceEEEEEecccCceeEEEecce----------eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .++|.+.+.||+|+||+||+|.+.          +++|.....    .+.+.+|+.+|++++|        |||++++++
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H--------pnIV~l~g~   83 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH--------EHIVKFYGV   83 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCC--------TTBCCEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCC--------CCCccEEEE
Confidence            357999999999999999999752          355554332    3457899999999998        779999998


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCC
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK-----------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPEN  208 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-----------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~N  208 (284)
                      +.    ....+||||||+ +|+|.+++....           ...+++..+..++.||+.||.|||++ +||||||||+|
T Consensus        84 ~~----~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDlKp~N  158 (299)
T 4asz_A           84 CV----EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRN  158 (299)
T ss_dssp             EC----SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGG
T ss_pred             Ee----eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccCHhh
Confidence            76    778899999999 788988887532           23599999999999999999999999 99999999999


Q ss_pred             eeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        209 VLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       209 Ill~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+.+ +.+||+|||+|+.......  .....+||+.|||||++.+.
T Consensus       159 ILl~~~-~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~  205 (299)
T 4asz_A          159 CLVGEN-LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR  205 (299)
T ss_dssp             EEECGG-GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHC
T ss_pred             EEECCC-CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCC
Confidence            999654 8999999999987654432  22345799999999999754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=7.4e-35  Score=260.08  Aligned_cols=163  Identities=18%  Similarity=0.322  Sum_probs=131.4

Q ss_pred             ccceEEEEEecccCceeEEEecce--------eEEEecC--CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSP--QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|++.+.||+|+||+||+|.++        +++|...  .....+.+|+.+|+.+.+       |+||++++++|.  
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~-------h~nIv~l~~~~~--   90 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGG-------QDNVMGVKYCFR--   90 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCS-------BTTBCCCSEEEE--
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcC-------CCCCceEEEEEE--
Confidence            457999999999999999999753        3444432  233457889999998853       378999999887  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ...++|+||||+ +++|.+.+.     .+++..++.++.||+.||.|||++ |||||||||+|||++.+.+.++|+||
T Consensus        91 --~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~DF  162 (361)
T 4f9c_A           91 --KNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDF  162 (361)
T ss_dssp             --ETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             --ECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence              788999999999 678887762     389999999999999999999999 99999999999999777789999999


Q ss_pred             cchhHhhhCC----------------------------CCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGH----------------------------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~----------------------------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|+......                            ....+.+||+.|+|||++.+.
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~  221 (361)
T 4f9c_A          163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC  221 (361)
T ss_dssp             TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC
T ss_pred             CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence            9986433211                            112356899999999999764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.4e-34  Score=252.80  Aligned_cols=165  Identities=19%  Similarity=0.215  Sum_probs=136.0

Q ss_pred             cceEEEEEecccCceeEEEecc----------eeEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .++++.++||+|+||+||+|..          .+++|....     ..+.+.+|+.++++++|        |||++++++
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~H--------pNIV~l~g~   97 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH--------PNVVCLLGV   97 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCC--------TTBCCEEEE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCC--------CCCCCcceE
Confidence            4689999999999999999974          235554322     23568899999999998        779999998


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCC
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK  205 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiK  205 (284)
                      +.    ....+||||||+ +|+|.+++....              ...+++..+..++.||+.||.|||++ +|||||||
T Consensus        98 ~~----~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLK  172 (308)
T 4gt4_A           98 VT----KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLA  172 (308)
T ss_dssp             EC----SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCS
T ss_pred             EE----ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCcc
Confidence            76    677899999999 789988886532              13489999999999999999999999 99999999


Q ss_pred             CCCeeEeeCCCcEEEEeccchhHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        206 PENVLLCVDEARVKTLALNATELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       206 p~NIll~~~~~~v~l~Dfg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+||||+.+ +.+||+|||+|+......  ....+.+||+.|||||++.+.
T Consensus       173 ~~NILl~~~-~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~  222 (308)
T 4gt4_A          173 TRNVLVYDK-LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYG  222 (308)
T ss_dssp             GGGEEECGG-GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHC
T ss_pred             ccceEECCC-CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCC
Confidence            999999554 899999999998664432  234467899999999998754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.8e-34  Score=254.28  Aligned_cols=165  Identities=17%  Similarity=0.213  Sum_probs=128.8

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+|.+.++||+|+||+||+|.++          +++|+....    .+.+.+|+.+|++++|        +||+++++++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H--------pnIV~l~g~~  112 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH--------QHIVRFFGVC  112 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC--------CCCCcEEEEE
Confidence            46999999999999999999642          355554332    3557899999999998        7799999987


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSK-------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~-------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                      .    ....+||||||+ +|+|.+++....             ..++++.++..|+.||+.||.|||++ +||||||||+
T Consensus       113 ~----~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLKp~  187 (329)
T 4aoj_A          113 T----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATR  187 (329)
T ss_dssp             C----SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGG
T ss_pred             E----ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHh
Confidence            6    778899999999 788888886532             13589999999999999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||||+. ++.+||+|||+|+.......  .....+||+.|||||++.+.
T Consensus       188 NILl~~-~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~  235 (329)
T 4aoj_A          188 NCLVGQ-GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR  235 (329)
T ss_dssp             GEEEET-TTEEEECCCC----------------CCCCGGGCCHHHHTTC
T ss_pred             hEEECC-CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCC
Confidence            999954 48999999999986644322  23356899999999998764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.3e-33  Score=254.21  Aligned_cols=209  Identities=61%  Similarity=0.966  Sum_probs=162.7

Q ss_pred             ccccCCCCccccCCCcCCCCCCcccccccceeccceEEEEEecccCceeEEEecc-----eeEEEecCCC---ChhhHHH
Q psy16752         43 ENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQF---PETALDE  114 (284)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~---~~~~~~E  114 (284)
                      +++...+.++++++...+..+++.++.+|+++.++|++.+.||+|+||+||+|.+     .+++|+....   .+.+.+|
T Consensus         4 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E   83 (397)
T 1wak_A            4 EEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDE   83 (397)
T ss_dssp             ------------------CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHH
T ss_pred             hhhhccCCcccccccccCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHH
Confidence            3444555666777888899999999999999999999999999999999999975     2455654432   3567789


Q ss_pred             HHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh
Q psy16752        115 IKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLH  194 (284)
Q Consensus       115 ~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  194 (284)
                      +.+++.+.+.+..++.|++|+++++.+...+.....+|+||||+++++++.+.......+++..++.++.||+.||.|||
T Consensus        84 ~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH  163 (397)
T 1wak_A           84 IRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH  163 (397)
T ss_dssp             HHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999899999999999999886666788999999999999999998876566999999999999999999999


Q ss_pred             hCCCcEecCCCCCCeeEeeCC------------------------------------------------CcEEEEeccch
Q psy16752        195 TKCRIIHTDIKPENVLLCVDE------------------------------------------------ARVKTLALNAT  226 (284)
Q Consensus       195 ~~~givHrDiKp~NIll~~~~------------------------------------------------~~v~l~Dfg~a  226 (284)
                      +++|||||||||+|||++.++                                                ..++|+|||++
T Consensus       164 ~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a  243 (397)
T 1wak_A          164 TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA  243 (397)
T ss_dssp             HTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGC
T ss_pred             HhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccc
Confidence            964899999999999996553                                                27999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ......   ....+||+.|+|||++.+.
T Consensus       244 ~~~~~~---~~~~~gt~~y~aPE~~~~~  268 (397)
T 1wak_A          244 CWVHKH---FTEDIQTRQYRSLEVLIGS  268 (397)
T ss_dssp             EETTBC---SCSCCSCGGGCCHHHHHTS
T ss_pred             cccccc---CccCCCCCcccCChhhcCC
Confidence            765432   3355799999999998764

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=5.3e-34  Score=269.50  Aligned_cols=163  Identities=21%  Similarity=0.280  Sum_probs=132.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..       ........|..++..+.+.+     ||+|++++++|. 
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~-----HP~IV~l~~~f~-  262 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-----CPFIVCMSYAFH-  262 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSC-----CTTBCCEEEEEE-
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCC-----CCCEeEEEEEEE-
Confidence            46999999999999999999873     3666532       12233455544444443211     378999999988 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         +...+||||||+ ||+|..++.+..  .+++..++.|+.||+.||.|||++ |||||||||+||||+. +++++|+|
T Consensus       263 ---~~~~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~-~G~vKL~D  335 (689)
T 3v5w_A          263 ---TPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDE-HGHVRISD  335 (689)
T ss_dssp             ---CSSEEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECT-TSCEEECC
T ss_pred             ---ECCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeC-CCCEEecc
Confidence               889999999999 789999887764  599999999999999999999999 9999999999999955 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||+|......  ...+.+||+.|||||++.+
T Consensus       336 FGlA~~~~~~--~~~t~~GTp~YmAPEvl~~  364 (689)
T 3v5w_A          336 LGLACDFSKK--KPHASVGTHGYMAPEVLQK  364 (689)
T ss_dssp             CTTCEECSSC--CCCSCCSCGGGCCHHHHST
T ss_pred             cceeeecCCC--CCCCccCCcCccCHHHHhC
Confidence            9999765433  3557899999999999964

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=8e-34  Score=252.27  Aligned_cols=170  Identities=19%  Similarity=0.214  Sum_probs=135.8

Q ss_pred             eccceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      ..++|++.+.||+|+||+||+|.++          +++|.....     .+.+.+|+.+|..+.|       |+||++++
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~h-------hpnIV~l~  134 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-------HLNVVNLL  134 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC-------CTTBCCEE
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCC-------CCcEEEEE
Confidence            3467999999999999999999752          244443221     2457889999999987       47799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTD  203 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrD  203 (284)
                      +++.   .....+||||||+ +|+|.+++....              ...+++..+..++.||+.||.|||++ +|||||
T Consensus       135 g~~~---~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~iiHRD  210 (353)
T 4ase_A          135 GACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRD  210 (353)
T ss_dssp             EEEC---CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSC
T ss_pred             EEEE---ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-CeecCc
Confidence            8753   1456789999999 788888886532              23488999999999999999999999 999999


Q ss_pred             CCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhcc
Q psy16752        204 IKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       204 iKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||+|||++.+ +.+||+|||+|+.......  ...+.+||+.|||||++.+..
T Consensus       211 LK~~NILl~~~-~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~  263 (353)
T 4ase_A          211 LAARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV  263 (353)
T ss_dssp             CSGGGEEECGG-GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             cCccceeeCCC-CCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCC
Confidence            99999999554 8999999999986654432  234568999999999997653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.1e-33  Score=245.22  Aligned_cols=168  Identities=17%  Similarity=0.199  Sum_probs=128.0

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCCC-ChhhHH--HHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF-PETALD--EIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~-~~~~~~--E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .+|.+.++||+|+||+||+|.++   +++|+.... ...+..  |+..+..++|        +||+++++++...+....
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~H--------pNIv~l~g~~~~~~~~~~   74 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH--------ENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC--------TTBCCEEEEEEEECSSSE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCC--------CCCCcEEEEEEecCCCce
Confidence            46999999999999999999874   355543322 223333  4444456666        779999998775444556


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------CcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC-------RIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      .+||||||+ +|+|.+.+...   ++++..+..++.|++.||.|||+++       +||||||||+||||+.+ +.+||+
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~-~~~Ki~  150 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIA  150 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT-SCEEEC
T ss_pred             EEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC-CCEEEE
Confidence            899999999 68888888654   3899999999999999999999642       79999999999999554 899999


Q ss_pred             eccchhHhhhCCC----CCCcccCCCCccchhhhhhcc
Q psy16752        222 ALNATELAATGHK----LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       222 Dfg~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||+|+.......    ...+.+||+.|||||++.+..
T Consensus       151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~  188 (303)
T 3hmm_A          151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI  188 (303)
T ss_dssp             CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCS
T ss_pred             eCCCCccccCCCCceeeecccccccccccCHHHhcccc
Confidence            9999886554332    223568999999999997754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.3e-33  Score=261.96  Aligned_cols=164  Identities=21%  Similarity=0.357  Sum_probs=138.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++++.||+|+||+||+|.++     +++|+....    .+.+.+|+.+|+.++|        +||++++++|.    
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~h--------pnIv~l~~~~~----  224 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH--------PTLVNLHDAFE----  224 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCC--------TTBCCEEEEEE----
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCC--------CCCCeEEEEEE----
Confidence            57999999999999999999873     355543222    3457889999999998        77999999888    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-CCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-EARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-~~~v~l~Dfg  224 (284)
                      ....+||||||+ +|+|++++.... ..+++..++.++.||+.||.|||++ ||+||||||+|||++.+ .+.++|+|||
T Consensus       225 ~~~~~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG  302 (573)
T 3uto_A          225 DDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFG  302 (573)
T ss_dssp             CSSEEEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred             ECCEEEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeecc
Confidence            889999999999 788988886543 3599999999999999999999999 99999999999999654 4799999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|...... ....+.+||+.|||||++.++
T Consensus       303 ~a~~~~~~-~~~~~~~GT~~y~APEv~~~~  331 (573)
T 3uto_A          303 LTAHLDPK-QSVKVTTGTAEFAAPEVAEGK  331 (573)
T ss_dssp             SCEECCTT-SEEEEECSSGGGCCHHHHTTC
T ss_pred             ceeEccCC-CceeeeEECccccCHHHhCCC
Confidence            99876544 334467899999999999875

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=4.5e-30  Score=224.65  Aligned_cols=184  Identities=21%  Similarity=0.241  Sum_probs=144.0

Q ss_pred             CCcCCCCCCcccccccceeccceEEEEEecccCceeEEEecce-----eEEEecCCCC------hhhHHHHHHHHhh-hc
Q psy16752         56 DPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFP------ETALDEIKLLKCV-RD  123 (284)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~------~~~~~E~~~l~~l-~~  123 (284)
                      ....+...++.|..++.++.++|++.++||+|+||+||+|.++     +++|+.....      .....|+..+..+ .|
T Consensus        37 ~~~~~~~~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h  116 (311)
T 3p1a_A           37 ASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH  116 (311)
T ss_dssp             SCSSCCCTTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCC
T ss_pred             CCcccCCCCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCC
Confidence            3345566777888899999999999999999999999999763     3555433221      2234444444444 44


Q ss_pred             CCCCCcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecC
Q psy16752        124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTD  203 (284)
Q Consensus       124 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrD  203 (284)
                              ++|+++++++.    ....+|+||||++++|.+.+.... ..+++..+..++.||+.||.|||++ +|+|||
T Consensus       117 --------~~iv~l~~~~~----~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~D  182 (311)
T 3p1a_A          117 --------PCCVRLEQAWE----EGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLD  182 (311)
T ss_dssp             --------TTBCCEEEEEE----ETTEEEEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCC
T ss_pred             --------CcEEEEEEEEE----eCCEEEEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEecCC
Confidence                    77999999876    778899999999999999887764 3599999999999999999999999 999999


Q ss_pred             CCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        204 IKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       204 iKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||+|||++.+ +.++|+|||++...... .......||+.|+|||++.+..
T Consensus       183 ikp~NIll~~~-~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  232 (311)
T 3p1a_A          183 VKPANIFLGPR-GRCKLGDFGLLVELGTA-GAGEVQEGDPRYMAPELLQGSY  232 (311)
T ss_dssp             CSGGGEEECGG-GCEEECCCTTCEECC-------CCCCCGGGCCGGGGGTCC
T ss_pred             CCHHHEEECCC-CCEEEccceeeeecccC-CCCcccCCCccccCHhHhcCCC
Confidence            99999999554 89999999998755433 2233567999999999987643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=4.4e-30  Score=227.45  Aligned_cols=163  Identities=22%  Similarity=0.330  Sum_probs=136.5

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..       .....+.+|+.+++.++|        ++|+++++.+. 
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~l~~~~~-   75 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH--------PFLTALKYAFQ-   75 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC--------TTBCCEEEEEE-
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCC--------CcCcceEEEEE-
Confidence            46999999999999999999763     3555432       233457789999998887        67999998887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +|+|...+....  .+++..++.++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|
T Consensus        76 ---~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~-g~vkL~D  148 (337)
T 1o6l_A           76 ---THDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKD-GHIKITD  148 (337)
T ss_dssp             ---CSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTT-SCEEECC
T ss_pred             ---eCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCC-CCEEEee
Confidence               788999999999 678888877654  599999999999999999999999 99999999999999554 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++...........+.+||+.|+|||++.+.
T Consensus       149 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  180 (337)
T 1o6l_A          149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDN  180 (337)
T ss_dssp             CTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred             ccchhhcccCCCcccccccChhhCChhhhcCC
Confidence            99988655444555678999999999998654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=3.6e-30  Score=229.37  Aligned_cols=164  Identities=26%  Similarity=0.337  Sum_probs=130.2

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+...       .......|..++..+..       |++|+++++++. 
T Consensus        23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~-------hp~Iv~l~~~~~-   94 (353)
T 3txo_A           23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-------HPFLTQLFCCFQ-   94 (353)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTT-------CTTBCCEEEEEE-
T ss_pred             hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccC-------CCceeeEEEEEE-
Confidence            57999999999999999999763     35554322       23456788889988742       277999999887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +|+|...+....  .+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+|
T Consensus        95 ---~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~-g~ikL~D  167 (353)
T 3txo_A           95 ---TPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHE-GHCKLAD  167 (353)
T ss_dssp             ---CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTT-SCEEECC
T ss_pred             ---eCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCC-CCEEEcc
Confidence               788999999999 678888887654  599999999999999999999999 99999999999999554 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||+|...........+.+||+.|+|||++.+.
T Consensus       168 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  199 (353)
T 3txo_A          168 FGMCKEGICNGVTTATFCGTPDYIAPEILQEM  199 (353)
T ss_dssp             CTTCBCSCC---------CCGGGCCHHHHHHH
T ss_pred             ccceeecccCCccccccCCCcCeEChhhcCCC
Confidence            99988655444555678999999999998654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=7.2e-30  Score=230.57  Aligned_cols=163  Identities=22%  Similarity=0.311  Sum_probs=136.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhh-hcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++++.||+|+||+||+|.++     +++|+...       ....+..|..++..+ +|        ++|+++++++.
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~h--------p~Iv~l~~~~~  123 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH--------PFLVGLHSCFQ  123 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTC--------TTBCCEEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCC--------CCcCeeEEEEE
Confidence            46999999999999999999763     35554321       234577899999887 55        77999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|...+.+..  .+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+
T Consensus       124 ----~~~~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~-g~ikL~  195 (396)
T 4dc2_A          124 ----TESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSE-GHIKLT  195 (396)
T ss_dssp             ----CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTT-SCEEEC
T ss_pred             ----ECCEEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCC-CCEEEe
Confidence                788999999999 678888877654  599999999999999999999999 99999999999999554 899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|...........+.+||+.|+|||++.+.
T Consensus       196 DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~  228 (396)
T 4dc2_A          196 DYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE  228 (396)
T ss_dssp             CCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTC
T ss_pred             ecceeeecccCCCccccccCCcccCCchhhcCC
Confidence            999998655444556688999999999998764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=5.2e-30  Score=227.41  Aligned_cols=165  Identities=23%  Similarity=0.382  Sum_probs=140.3

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEeccC
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      +.++|++.+.||+|+||+||+|.++     .++|+.........+|+.++.++ .|        +||+++++.+.    .
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~h--------p~iv~~~~~~~----~   87 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQH--------PNIITLKDVYD----D   87 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTS--------TTBCCEEEEEE----C
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCC--------CCcCeEEEEEE----c
Confidence            4467999999999999999999763     46777666666778899999888 45        77999999887    7


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC---CcEEEEec
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE---ARVKTLAL  223 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~---~~v~l~Df  223 (284)
                      ...+|+||||+ +|+|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||+..++   ..++|+||
T Consensus        88 ~~~~~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Df  164 (342)
T 2qr7_A           88 GKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDF  164 (342)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence            88999999999 778888887653  599999999999999999999999 999999999999985443   35999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |++...........+.+||+.|+|||++.+
T Consensus       165 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  194 (342)
T 2qr7_A          165 GFAKQLRAENGLLMTPCYTANFVAPEVLER  194 (342)
T ss_dssp             TTCEECBCTTCCBCCSSCCSSCCCHHHHHH
T ss_pred             CCcccCcCCCCceeccCCCccccCHHHhcC
Confidence            999876655555567889999999999865

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1.1e-29  Score=224.87  Aligned_cols=165  Identities=25%  Similarity=0.426  Sum_probs=139.7

Q ss_pred             ccceEEEEEecccCceeEEEecc-----eeEEEec-------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVS-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++.+.||+|+||+||+|.+     .+++|+.       ......+.+|+.+++.++|        +||+++++.+.
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~l~~~~~   79 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH--------PHIIKLYDVIT   79 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCC--------TTBCCEEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCC--------CCCCeEEEEEE
Confidence            35799999999999999999986     2355542       2234578899999999988        67999999877


Q ss_pred             EeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        143 ICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                          ....+|+||||++|+|++.+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++ +++.++|+|
T Consensus        80 ----~~~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~-~~~~~kl~D  151 (336)
T 3h4j_B           80 ----TPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLD-DNLNVKIAD  151 (336)
T ss_dssp             ----CSSEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEEC-TTCCEEECC
T ss_pred             ----eCCEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEc-CCCCEEEEE
Confidence                778899999999999999988764  599999999999999999999999 999999999999995 448999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      ||++.....+ ....+.+||+.|+|||++.+...
T Consensus       152 FG~s~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~  184 (336)
T 3h4j_B          152 FGLSNIMTDG-NFLKTSCGSPNYAAPEVINGKLY  184 (336)
T ss_dssp             SSCTBTTTTS-BTTCCCTTSTTTSCGGGSCCSGG
T ss_pred             eccceeccCC-cccccccCCcCcCCHHHHcCCCC
Confidence            9998766544 34456789999999999976543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=6.3e-30  Score=223.77  Aligned_cols=171  Identities=23%  Similarity=0.309  Sum_probs=139.1

Q ss_pred             ccccceeccceEEEEEecccCceeEEEecce----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         68 VKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        68 ~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      ...+..+.++|++++.||+|+||+||+|.+.    .++|.....      ...+.+|+.+++.++|        +||+++
T Consensus        13 ~~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~   84 (311)
T 3niz_A           13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH--------PNIVSL   84 (311)
T ss_dssp             --CEECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCC--------TTBCCE
T ss_pred             ceeecchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCC--------CCEeee
Confidence            3445556678999999999999999999862    344543221      2457789999999988        679999


Q ss_pred             cccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        138 LDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      ++.+.    ....+|+||||+.+++.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.
T Consensus        85 ~~~~~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~-~~  157 (311)
T 3niz_A           85 IDVIH----SERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSD-GA  157 (311)
T ss_dssp             EEEEC----CSSCEEEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTT-CC
T ss_pred             eeEEc----cCCEEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCC-CC
Confidence            99876    778899999999999998887654 3599999999999999999999999 99999999999999554 89


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++|+|||++..............||+.|+|||++.+
T Consensus       158 ~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~  193 (311)
T 3niz_A          158 LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG  193 (311)
T ss_dssp             EEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTT
T ss_pred             EEEccCcCceecCCCcccccCCcccCCcCCHHHhcC
Confidence            999999999876554444456689999999999865

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.96  E-value=8.3e-30  Score=224.85  Aligned_cols=164  Identities=21%  Similarity=0.421  Sum_probs=137.0

Q ss_pred             cceEEEEEecccCceeEEEecc-----eeEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|+||.||+|.+     .+++|+...      ..+.+.+|+.+++.++|        +||+++++.+.  
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~l~~~~~--   84 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--------PNIVKLFEVIE--   84 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE--
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEE--
Confidence            4699999999999999999986     235554322      12346789999999988        67999999876  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+||
T Consensus        85 --~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~-~~~~kl~DF  158 (328)
T 3fe3_A           85 --TEKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDA-DMNIKIADF  158 (328)
T ss_dssp             --CSSEEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT-TSCEEECST
T ss_pred             --ECCEEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcC-CCCEEEeec
Confidence              788899999999 778888887654  599999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      |++...... ......+||++|+|||++.+.-.
T Consensus       159 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~  190 (328)
T 3fe3_A          159 GFSNEFTVG-GKLDAFCGAPPYAAPELFQGKKY  190 (328)
T ss_dssp             TCCGGGSSS-CGGGTTSSSGGGCCHHHHHTCCC
T ss_pred             cCceecCCC-CccccccCCcceeCcccccCCCc
Confidence            998766544 23446789999999999976543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.96  E-value=3.8e-31  Score=233.68  Aligned_cols=172  Identities=19%  Similarity=0.204  Sum_probs=135.7

Q ss_pred             ccceEEEEEecccCceeEEEecce---eEEEecCCC------------ChhhHHHHHHHHhhh---------cCCCCCc-
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF------------PETALDEIKLLKCVR---------DGDVNDP-  129 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~------------~~~~~~E~~~l~~l~---------~~~~~~~-  129 (284)
                      .++|++.+.||+|+||+||+|.+.   +++|+....            .+.+.+|+.+++.++         |+++... 
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            357999999999999999999873   355543322            166889999999997         5554332 


Q ss_pred             --------ccchhccccccceEec---------cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q psy16752        130 --------YRERVVQLLDDFKICG---------VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLN  191 (284)
Q Consensus       130 --------~~~~i~~l~~~~~~~~---------~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  191 (284)
                              .|++|++++++|....         .....+|+||||+ +|++++.+.+   ..+++..++.++.||+.||.
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHH
Confidence                    1588888888775210         0267899999999 6667777754   34899999999999999999


Q ss_pred             HHh-hCCCcEecCCCCCCeeEeeCC-------------------CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhh
Q psy16752        192 YLH-TKCRIIHTDIKPENVLLCVDE-------------------ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSEL  251 (284)
Q Consensus       192 ~LH-~~~givHrDiKp~NIll~~~~-------------------~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l  251 (284)
                      ||| ++ |||||||||+|||++.++                   ..++|+|||+|......     ..+||+.|+|||++
T Consensus       176 ~lH~~~-~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE~~  249 (336)
T 2vuw_A          176 VAEASL-RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDEDLF  249 (336)
T ss_dssp             HHHHHH-CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSGGG
T ss_pred             HHHHhC-CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChhhh
Confidence            999 89 999999999999997663                   28999999999865543     55899999999999


Q ss_pred             hhcc
Q psy16752        252 SRRM  255 (284)
Q Consensus       252 ~~~~  255 (284)
                      .+..
T Consensus       250 ~g~~  253 (336)
T 2vuw_A          250 TGDG  253 (336)
T ss_dssp             CCCS
T ss_pred             cCCC
Confidence            7654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=1.3e-29  Score=225.15  Aligned_cols=163  Identities=22%  Similarity=0.339  Sum_probs=136.1

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhh-hcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|.+.+.||+|+||.||+|.++     +++|+..       ........|..++..+ .|        ++|+++++.+.
T Consensus        17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~h--------p~iv~l~~~~~   88 (345)
T 1xjd_A           17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--------PFLTHMFCTFQ   88 (345)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC--------TTBCCEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCC--------CCCCcEEEEEE
Confidence            57999999999999999999863     3555432       2334567888888877 55        77999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+
T Consensus        89 ----~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~-g~vkL~  160 (345)
T 1xjd_A           89 ----TKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKD-GHIKIA  160 (345)
T ss_dssp             ----CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTT-SCEEEC
T ss_pred             ----eCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCC-CCEEEe
Confidence                788999999999 778888887654  499999999999999999999999 99999999999999554 899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++...........+.+||+.|+|||++.+.
T Consensus       161 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  193 (345)
T 1xjd_A          161 DFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ  193 (345)
T ss_dssp             CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred             EChhhhhcccCCCcccCCCCCcccCChhhhcCC
Confidence            999987654444455678999999999998764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.96  E-value=1e-29  Score=232.93  Aligned_cols=167  Identities=22%  Similarity=0.311  Sum_probs=137.8

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+.++|++.+.||+|+||+||+|.++     .++++....      .+.+.+|+.+++.++|        +||+++++.+
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~l~~~~   79 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH--------PNIVRLHDSI   79 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCB--------TTBCCEEEEE
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC--------cCCCeEEEEE
Confidence            34567999999999999999999762     344443222      2457889999999988        6799999988


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARV  218 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v  218 (284)
                      .    .....|+||||+ +|+|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+  ++.+
T Consensus        80 ~----~~~~~~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~v  152 (444)
T 3soa_A           80 S----EEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAV  152 (444)
T ss_dssp             E----CSSEEEEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCE
T ss_pred             E----ECCEEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcE
Confidence            7    788999999999 778888887654  599999999999999999999999 99999999999999753  4789


Q ss_pred             EEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|+|||++.............+||+.|+|||++.+.
T Consensus       153 kL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~  188 (444)
T 3soa_A          153 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD  188 (444)
T ss_dssp             EECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTC
T ss_pred             EEccCceeEEecCCCceeecccCCcccCCHHHhcCC
Confidence            999999998766555555677899999999998764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=1.8e-29  Score=219.16  Aligned_cols=171  Identities=21%  Similarity=0.314  Sum_probs=134.4

Q ss_pred             cccceeccceEEEEEecccCceeEEEecce-----eEEEecCC---C----ChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         69 KIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---F----PETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        69 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      .+|.++.++|++.+.||+|+||.||+|.+.     .++|....   .    .+.+.+|+.+++.++|        +||++
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------p~iv~   75 (294)
T 4eqm_A            4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH--------QNIVS   75 (294)
T ss_dssp             CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCB--------TTBCC
T ss_pred             chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCC--------CCCce
Confidence            457788899999999999999999999752     35554311   1    2456789999999988        67999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      +++.+.    ....+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ 
T Consensus        76 ~~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~-  147 (294)
T 4eqm_A           76 MIDVDE----EDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSN-  147 (294)
T ss_dssp             EEEEEE----CSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT-
T ss_pred             EEEeee----eCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCC-
Confidence            998776    788999999999 668888887654  599999999999999999999999 99999999999999544 


Q ss_pred             CcEEEEeccchhHhhhCC-CCCCcccCCCCccchhhhhhcc
Q psy16752        216 ARVKTLALNATELAATGH-KLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~-~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +.++|+|||++....... ......+||+.|+|||++.+..
T Consensus       148 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  188 (294)
T 4eqm_A          148 KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA  188 (294)
T ss_dssp             SCEEECCCSSSTTC-------------CCSSCCHHHHHTCC
T ss_pred             CCEEEEeCCCccccccccccccCccccCccccCHhHhcCCC
Confidence            899999999987654432 2233567999999999987653

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=1.3e-29  Score=230.04  Aligned_cols=163  Identities=21%  Similarity=0.289  Sum_probs=135.8

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEec-------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++++.||+|+||+||+|.++     +++|+.       ......+.+|+.+++.++|        ++|+++++++.
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~h--------p~Iv~l~~~~~  139 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS--------PWVVQLFYAFQ  139 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCC--------TTBCCEEEEEE
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCC--------CCCCeEEEEEE
Confidence            357999999999999999999863     355543       2234557899999999988        77999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|.+.+...   .+++..++.++.||+.||.|||++ |||||||||+|||++. .+.++|+
T Consensus       140 ----~~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~-~g~ikL~  210 (410)
T 3v8s_A          140 ----DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDK-SGHLKLA  210 (410)
T ss_dssp             ----CSSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TSCEEEC
T ss_pred             ----ECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECC-CCCEEEe
Confidence                788999999999 77888877543   499999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|........ ...+.+||+.|+|||++.+.
T Consensus       211 DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~  244 (410)
T 3v8s_A          211 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ  244 (410)
T ss_dssp             CCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTT
T ss_pred             ccceeEeeccCCcccccCCcCCccccCHHHhhcc
Confidence            9999876544322 33477899999999999754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.96  E-value=1.5e-29  Score=225.35  Aligned_cols=177  Identities=29%  Similarity=0.464  Sum_probs=145.6

Q ss_pred             cccccceeccceEEEEEecccCceeEEEecc-----eeEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         67 PVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        67 ~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      ....|.++.++|++++.||+|+||+||+|.+     .+++|+....   ......|+.+++.+.+..   ..|+||++++
T Consensus        26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~---~~h~~iv~~~  102 (360)
T 3llt_A           26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDD---INNNNIVKYH  102 (360)
T ss_dssp             CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCS---TTGGGBCCEE
T ss_pred             eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccC---CCCCCeeccc
Confidence            3566788889999999999999999999986     2355654332   345677999999987532   2347899999


Q ss_pred             ccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee-----
Q psy16752        139 DDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV-----  213 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~-----  213 (284)
                      +.+.    ....+|+||||++++|.+.+.......+++..+..++.||+.||.|||++ |||||||||+|||++.     
T Consensus       103 ~~~~----~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A          103 GKFM----YYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             EEEE----ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCTTCCE
T ss_pred             ceee----ECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEccccccc
Confidence            9877    67789999999999999999887656699999999999999999999999 9999999999999963     


Q ss_pred             -------------------CCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        214 -------------------DEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 -------------------~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                                         ..+.++|+|||++.....   ......||+.|+|||++.+.
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~  234 (360)
T 3llt_A          178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNL  234 (360)
T ss_dssp             EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHTTC
T ss_pred             cccchhcccccccccccccCCCCEEEEeccCceecCC---CCcCccCcccccCcHHHcCC
Confidence                               357999999999875433   23466899999999998654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.96  E-value=1.7e-29  Score=218.63  Aligned_cols=164  Identities=24%  Similarity=0.351  Sum_probs=137.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++++.||+|+||+||+|.++     .++|+....      ...+.+|+.+++.++|        +||+++++.+.  
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~--   71 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH--------KNIVRLHDVLH--   71 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC--------TTBCCEEEEEE--
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCC--------CCEeeEEeEEE--
Confidence            46999999999999999999863     355543211      2556789999999987        67999999877  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ....+|+||||+++++.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||
T Consensus        72 --~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~-~~~~kl~Dfg  146 (292)
T 3o0g_A           72 --SDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINR-NGELKLANFG  146 (292)
T ss_dssp             --ETTEEEEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TSCEEECCCT
T ss_pred             --eCCEEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcC-CCCEEEeecc
Confidence              678899999999999998887654 3599999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++..............||+.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  176 (292)
T 3o0g_A          147 LARAFGIPVRCYSAEVVTLWYRPPDVLFGA  176 (292)
T ss_dssp             TCEECCSCCSCCCSCCSCGGGCCHHHHTTC
T ss_pred             cceecCCccccccCCccccCCcChHHHcCC
Confidence            998766555555567899999999998654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.96  E-value=3.1e-29  Score=218.69  Aligned_cols=178  Identities=24%  Similarity=0.397  Sum_probs=135.7

Q ss_pred             cccceeccceEEEEEecccCceeEEEecce-----eEEEecC---------CCChhhHHHHHHHHhhhcCCCCCcccchh
Q psy16752         69 KIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP---------QFPETALDEIKLLKCVRDGDVNDPYRERV  134 (284)
Q Consensus        69 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i  134 (284)
                      ++|.++.++|++.+.||+|+||+||+|.++     +++|+..         .......+|+.+++.+...     .|+||
T Consensus         2 p~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----~h~ni   76 (308)
T 3g33_A            2 PLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF-----EHPNV   76 (308)
T ss_dssp             --------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHH-----CCTTB
T ss_pred             CCCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhc-----CCCCe
Confidence            356777789999999999999999999862     3555432         1234678899998888721     02779


Q ss_pred             ccccccceEecc-CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        135 VQLLDDFKICGV-NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       135 ~~l~~~~~~~~~-~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      +++++.+..... ....+++||||++++|.+++.......+++..+..++.||+.||.|||++ ||+||||||+|||++.
T Consensus        77 v~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~  155 (308)
T 3g33_A           77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTS  155 (308)
T ss_dssp             CCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECT
T ss_pred             EEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcC
Confidence            999988763221 23368999999999999999876655599999999999999999999999 9999999999999954


Q ss_pred             CCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        214 DEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                       ++.++|+|||++...... ......+||+.|+|||++.+.
T Consensus       156 -~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  194 (308)
T 3g33_A          156 -GGTVKLADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQS  194 (308)
T ss_dssp             -TSCEEECSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTS
T ss_pred             -CCCEEEeeCccccccCCC-cccCCccccccccCchHHcCC
Confidence             489999999998765433 333467899999999998543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=9e-30  Score=221.37  Aligned_cols=162  Identities=23%  Similarity=0.380  Sum_probs=136.0

Q ss_pred             cceEEEEEecccCceeEEEecc-----eeEEEec----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS-----KTQVLVS----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++.+.||+|+||+||+|.+     .+++|..    ....+.+.+|+.+++.+.|        +||+++++.+.    
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~----   87 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--------PNIVNYLDSYL----   87 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEE----
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCC--------CCCCeEeEEEE----
Confidence            5799999999999999999975     2344442    2234557889999999988        67999999877    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||+ +++|.+.+...   .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|||+
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~-~~~kl~Dfg~  162 (297)
T 3fxz_A           88 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMD-GSVKLTDFGF  162 (297)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT-CCEEECCCTT
T ss_pred             ECCEEEEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCC-CCEEEeeCCC
Confidence            677899999999 77887777654   389999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.............+||+.|+|||++.+.
T Consensus       163 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  191 (297)
T 3fxz_A          163 CAQITPEQSKRSTMVGTPYWMAPEVVTRK  191 (297)
T ss_dssp             CEECCSTTCCBCCCCSCGGGCCHHHHHCS
T ss_pred             ceecCCcccccCCccCCcCccChhhhcCC
Confidence            88766655556677899999999998654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=1.9e-29  Score=224.03  Aligned_cols=163  Identities=23%  Similarity=0.315  Sum_probs=135.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhh-hcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++++.||+|+||.||+|.++     +++|+....       ...+.+|..++..+ .|        ++|+++++++.
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--------p~iv~l~~~~~   80 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--------PFLVGLHSCFQ   80 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTC--------TTBCCEEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCC--------CccCeEEEEEE
Confidence            46999999999999999999763     355543321       23367788888887 55        77999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +++|.+.+....  .+++..++.++.||+.||.|||++ ||+||||||+|||++. ++.++|+
T Consensus        81 ----~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~-~g~~kL~  152 (345)
T 3a8x_A           81 ----TESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDS-EGHIKLT  152 (345)
T ss_dssp             ----CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECT-TSCEEEC
T ss_pred             ----eCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECC-CCCEEEE
Confidence                788999999999 678888887654  599999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++...........+.+||+.|+|||++.+.
T Consensus       153 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  185 (345)
T 3a8x_A          153 DYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE  185 (345)
T ss_dssp             CGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred             eccccccccCCCCcccccCCCccccCccccCCC
Confidence            999988654444455678999999999998764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=1.6e-29  Score=225.25  Aligned_cols=164  Identities=21%  Similarity=0.246  Sum_probs=134.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||.||+|.++     +++|+..       ...+.+..|..++..+.+       |++|+.+++.+. 
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~-------hp~iv~l~~~~~-   91 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK-------PPFLTQLHSCFQ-   91 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTC-------CTTBCCEEEEEE-
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCC-------CCEEeeEEEEEE-
Confidence            46999999999999999999873     3445432       223456778888877632       377999998887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +|+|.+.+....  .+++..++.++.||+.||.|||++ ||+||||||+|||++. ++.++|+|
T Consensus        92 ---~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~-~g~vkL~D  164 (353)
T 2i0e_A           92 ---TMDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDS-EGHIKIAD  164 (353)
T ss_dssp             ---CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECT-TSCEEECC
T ss_pred             ---cCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcC-CCcEEEEe
Confidence               778999999999 678888887654  499999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++...........+.+||+.|+|||++.+.
T Consensus       165 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  196 (353)
T 2i0e_A          165 FGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ  196 (353)
T ss_dssp             CTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred             CCcccccccCCcccccccCCccccChhhhcCC
Confidence            99988654444455678999999999998654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.96  E-value=2e-29  Score=225.24  Aligned_cols=165  Identities=26%  Similarity=0.414  Sum_probs=136.5

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCCC----------ChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF----------PETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +.++|++.+.||+|+||+||+|.++     .++|+....          .+.+.+|+.+++.+.|        +||++++
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~l~   81 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH--------PNIITLH   81 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCC--------TTBCCEE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCC--------cCCCcEE
Confidence            4457999999999999999999763     355543221          2457899999999988        6799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC-
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA-  216 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~-  216 (284)
                      +++.    ....+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.++. 
T Consensus        82 ~~~~----~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~  154 (361)
T 2yab_A           82 DVYE----NRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIP  154 (361)
T ss_dssp             EEEE----CSSEEEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSS
T ss_pred             EEEE----eCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCC
Confidence            9887    788999999999 788888886543  599999999999999999999999 9999999999999965543 


Q ss_pred             --cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 --RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 --~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                        .++|+|||++...... ......+||+.|+|||++.+.
T Consensus       155 ~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  193 (361)
T 2yab_A          155 IPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYE  193 (361)
T ss_dssp             SCCEEECCCSSCEECCTT-CCCCCCCSCGGGCCHHHHTTC
T ss_pred             ccCEEEEecCCceEcCCC-CccccCCCCccEECchHHcCC
Confidence              7999999998765543 233467899999999998764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=227.42  Aligned_cols=162  Identities=22%  Similarity=0.371  Sum_probs=135.1

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++++.||+|+||.||+|.++     +++|+..       .....+.+|+.+++.+.|        ++|+++++++.
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--------p~Iv~l~~~~~   85 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH--------PFLVNLWYSFQ   85 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC--------TTBCCEEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCC--------CCCCcEEEEEE
Confidence            457999999999999999999763     3555432       223567789999999987        67999998887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|...+....  .+++..++.++.||+.||.|||++ |||||||||+|||++. .+.++|+
T Consensus        86 ----~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~-~g~vkL~  157 (384)
T 4fr4_A           86 ----DEEDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDE-HGHVHIT  157 (384)
T ss_dssp             ----CSSEEEEEECCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TSCEEEC
T ss_pred             ----eCCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECC-CCCEEEe
Confidence                778999999999 777777776543  599999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++...... ....+.+||+.|+|||++.+
T Consensus       158 DFG~a~~~~~~-~~~~~~~gt~~Y~aPE~~~~  188 (384)
T 4fr4_A          158 DFNIAAMLPRE-TQITTMAGTKPYMAPEMFSS  188 (384)
T ss_dssp             CCTTCEECCTT-CCBCCCCSCGGGCCGGGTCC
T ss_pred             ccceeeeccCC-CceeccCCCccccCCeeecc
Confidence            99999765433 34457789999999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.96  E-value=3.6e-29  Score=228.78  Aligned_cols=163  Identities=17%  Similarity=0.267  Sum_probs=135.2

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++.+.||+|+||+||+|.++     +++|+..       .....+..|..++..+.|        ++|+++++++.
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~h--------p~Iv~l~~~~~  144 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS--------KWITTLHYAFQ  144 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCT--------TTBCCEEEEEE
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCC--------CCEEEEEEEEe
Confidence            467999999999999999999863     3455432       233457889999999887        77999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|.+++.... ..+++..++.++.||+.||.|||++ |||||||||+||||+. ++.++|+
T Consensus       145 ----~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~-~g~vkL~  217 (437)
T 4aw2_A          145 ----DDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDM-NGHIRLA  217 (437)
T ss_dssp             ----CSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TSCEEEC
T ss_pred             ----eCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcC-CCCEEEc
Confidence                788999999999 788888887633 3599999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCC-CCCcccCCCCccchhhhh
Q psy16752        222 ALNATELAATGHK-LPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       222 Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~  252 (284)
                      |||+|........ .....+||+.|+|||++.
T Consensus       218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~  249 (437)
T 4aw2_A          218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ  249 (437)
T ss_dssp             CCTTCEECCTTSCEECCSCCSCGGGCCHHHHH
T ss_pred             chhhhhhcccCCCcccccccCCcCeeChHHHh
Confidence            9999876544332 233568999999999986

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=3.1e-29  Score=223.96  Aligned_cols=185  Identities=16%  Similarity=0.193  Sum_probs=141.9

Q ss_pred             ccccceec----cceEEEEEecccCceeEEEecc----------eeEEEecCCCChhhHHHHHHHHhhhcCC-------C
Q psy16752         68 VKIGMLFN----NRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQFPETALDEIKLLKCVRDGD-------V  126 (284)
Q Consensus        68 ~~~~~~~~----~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~~~~~~~E~~~l~~l~~~~-------~  126 (284)
                      +..|.++.    ++|++.+.||+|+||+||+|.+          .+++|+.......+.+|+.++..+.+..       .
T Consensus        23 ~~~g~~i~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~  102 (364)
T 3op5_A           23 FAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT  102 (364)
T ss_dssp             CCTTCEEECTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             cCCCcEeeccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHH
Confidence            34444444    4899999999999999999965          2467776666667778888777765521       1


Q ss_pred             CCcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCC
Q psy16752        127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP  206 (284)
Q Consensus       127 ~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp  206 (284)
                      ....|+||+++++.+........+.|+||||++++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||
T Consensus       103 ~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp  180 (364)
T 3op5_A          103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKA  180 (364)
T ss_dssp             TTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCG
T ss_pred             hhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCH
Confidence            22235779999998775444557899999999888888877643 4599999999999999999999999 999999999


Q ss_pred             CCeeEee-CCCcEEEEeccchhHhhhCCC-------CCCcccCCCCccchhhhhhc
Q psy16752        207 ENVLLCV-DEARVKTLALNATELAATGHK-------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       207 ~NIll~~-~~~~v~l~Dfg~a~~~~~~~~-------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++. +.+.++|+|||++........       .....+||+.|+|||++.+.
T Consensus       181 ~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  236 (364)
T 3op5_A          181 SNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV  236 (364)
T ss_dssp             GGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTC
T ss_pred             HHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCC
Confidence            9999962 458999999999875543321       12345699999999998664

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.96  E-value=5.7e-29  Score=219.20  Aligned_cols=167  Identities=21%  Similarity=0.291  Sum_probs=136.2

Q ss_pred             eeccceEEEEEecccCceeEEEecc-----eeEEEec--CCCChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEe
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVS--PQFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++.++|++.+.||+|+||+||+|.+     .+++|+.  ......+.+|+.+++.+ .|        ++|+.+++.+.  
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h--------~~i~~~~~~~~--   75 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG--------DGIPQVYYFGP--   75 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSC--------TTSCCEEEEEE--
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCC--------CCCCEEEEEEe--
Confidence            4456899999999999999999975     2355543  33456788999999999 66        67898888766  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc-----EE
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR-----VK  219 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~-----v~  219 (284)
                        .....|+||||++++|.+++.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.     ++
T Consensus        76 --~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~-~~~~~~~~k  150 (330)
T 2izr_A           76 --CGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRP-GNKTQQVIH  150 (330)
T ss_dssp             --ETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCG-GGTCTTSEE
T ss_pred             --cCCccEEEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccC-CCCCCceEE
Confidence              677899999999889988887653 4599999999999999999999999 99999999999999655 44     99


Q ss_pred             EEeccchhHhhhCCCC-------CCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKL-------PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~-------~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++.........       ....+||+.|+|||++.+.
T Consensus       151 l~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  192 (330)
T 2izr_A          151 IIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGK  192 (330)
T ss_dssp             ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC
T ss_pred             EEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCC
Confidence            9999999865433221       2467899999999998764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.96  E-value=6.5e-29  Score=222.83  Aligned_cols=163  Identities=21%  Similarity=0.338  Sum_probs=128.2

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHH-HHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKL-LKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~-l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++++.||+|+||.||+|.++     +++|+....       ...+..|..+ ++.+.|        ++|+++++.+.
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~h--------p~Iv~l~~~~~  109 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH--------PFLVGLHFSFQ  109 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCC--------TTBCCEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCC--------CCCCCEEEEEE
Confidence            57999999999999999999863     355543221       2223444443 233444        77999998887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|.+.+.+..  .+++..++.++.||+.||.|||++ ||+||||||+|||++. ++.++|+
T Consensus       110 ----~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~-~g~ikL~  181 (373)
T 2r5t_A          110 ----TADKLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDS-QGHIVLT  181 (373)
T ss_dssp             ----CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECT-TSCEEEC
T ss_pred             ----eCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECC-CCCEEEe
Confidence                788999999999 678888887654  589999999999999999999999 9999999999999955 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++...........+.+||+.|+|||++.+.
T Consensus       182 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  214 (373)
T 2r5t_A          182 DFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ  214 (373)
T ss_dssp             CCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTC
T ss_pred             eCccccccccCCCccccccCCccccCHHHhCCC
Confidence            999998766555566788999999999998764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.96  E-value=4.7e-29  Score=215.58  Aligned_cols=164  Identities=24%  Similarity=0.377  Sum_probs=132.0

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++++.||+|+||+||+|.+.    .++|....      ....+.+|+.+++.++|        +||+++++.+.   
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~---   70 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH--------SNIVKLYDVIH---   70 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC--------TTBCCEEEEEE---
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCC--------CCEeeeeeEEc---
Confidence            46999999999999999999762    34554322      23567899999999988        67999999876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....+|+||||+.++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||+
T Consensus        71 -~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~-~~~~kl~Dfg~  146 (288)
T 1ob3_A           71 -TKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINR-EGELKIADFGL  146 (288)
T ss_dssp             -CSSCEEEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT-TSCEEECCTTH
T ss_pred             -cCCeEEEEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcC-CCCEEEeECcc
Confidence             678899999999999988887643 3599999999999999999999999 9999999999999954 48999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............||+.|+|||++.+.
T Consensus       147 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  175 (288)
T 1ob3_A          147 ARAFGIPVRKYTHEIVTLWYRAPDVLMGS  175 (288)
T ss_dssp             HHHHCC---------CCCTTCCHHHHTTC
T ss_pred             ccccCccccccccccccccccCchheeCC
Confidence            98765443444456799999999998653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=1.6e-29  Score=224.85  Aligned_cols=169  Identities=27%  Similarity=0.331  Sum_probs=138.2

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      .+.++|++.+.||+|+||+||+|.++     +++|+...         ..+.+.+|+.+++.++|        +||++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~~~   92 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH--------PHIVELL   92 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCC--------TTBCCEE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCC--------CCCCcEE
Confidence            44568999999999999999999763     35554311         24567899999999988        6799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      +.+.    ....+|+||||+ +++|.+.+....  ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++
T Consensus        93 ~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~  167 (351)
T 3c0i_A           93 ETYS----SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKE  167 (351)
T ss_dssp             EEEE----ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSS
T ss_pred             EEEE----eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCC
Confidence            9877    677899999999 678877776532  23489999999999999999999999 999999999999996542


Q ss_pred             --CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        216 --ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       216 --~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                        ..++|+|||++.............+||+.|+|||++.+.
T Consensus       168 ~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  208 (351)
T 3c0i_A          168 NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE  208 (351)
T ss_dssp             TTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTC
T ss_pred             CCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCC
Confidence              359999999998766554445567899999999998764

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=4.4e-29  Score=223.09  Aligned_cols=170  Identities=24%  Similarity=0.328  Sum_probs=138.0

Q ss_pred             cccceeccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         69 KIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        69 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      ..+..+.++|++.+.||+|+||.||+|.++     .++|+....      .+.+.+|+.+++.+.|        +||+++
T Consensus        22 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~~   93 (362)
T 2bdw_A           22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH--------PNIVRL   93 (362)
T ss_dssp             --CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCC--------TTBCCE
T ss_pred             cCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC--------CCCCeE
Confidence            334455678999999999999999999763     355543321      2457789999999988        679999


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--  214 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--  214 (284)
                      ++.+.    .....|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+  
T Consensus        94 ~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~  166 (362)
T 2bdw_A           94 HDSIQ----EESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAK  166 (362)
T ss_dssp             EEEEE----CSSEEEEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSST
T ss_pred             EEEEE----eCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCC
Confidence            99877    788999999999 678888886543  589999999999999999999999 99999999999999654  


Q ss_pred             CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        215 EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...++|+|||++...... ......+||+.|+|||++.+.
T Consensus       167 ~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  205 (362)
T 2bdw_A          167 GAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLKKD  205 (362)
T ss_dssp             TCCEEECCCTTCBCCTTC-CSCCCSCSCTTTCCHHHHTTC
T ss_pred             CCCEEEeecCcceEecCC-cccccCCCCccccCHHHHccC
Confidence            246999999998766543 233467899999999998764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.96  E-value=6.7e-29  Score=218.78  Aligned_cols=164  Identities=23%  Similarity=0.315  Sum_probs=126.8

Q ss_pred             ccceEEEEEecccCceeEEEecce--------eEEEecCC--------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQ--------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      .++|++.+.||+|+||.||+|.+.        .++|+...        ....+.+|+.+++.++|        +||++++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~   87 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH--------PFIVDLI   87 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCC--------TTBCCEE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCC--------CCcccee
Confidence            357999999999999999998752        35554322        23446789999999988        6799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+.    ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.
T Consensus        88 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~-~~~  159 (327)
T 3a62_A           88 YAFQ----TGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNH-QGH  159 (327)
T ss_dssp             EEEE----CSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECT-TSC
T ss_pred             EEEE----cCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECC-CCc
Confidence            8877    778899999999 678888887654  489999999999999999999999 9999999999999954 489


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|+|||++.............+||+.|+|||++.+.
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  196 (327)
T 3a62_A          160 VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS  196 (327)
T ss_dssp             EEECCCSCC----------CTTSSCCTTSCHHHHTTS
T ss_pred             EEEEeCCcccccccCCccccccCCCcCccCHhhCcCC
Confidence            9999999988655544455577899999999998654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=6.3e-29  Score=223.47  Aligned_cols=171  Identities=19%  Similarity=0.325  Sum_probs=137.2

Q ss_pred             ccceEEEEEecccCceeEEEecc-----eeEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec----
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG----  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~----  145 (284)
                      .++|++.+.||+|+||+||+|.+     .+++|..........+|+.+++.++|        +||+++++++...+    
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~h--------pnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDH--------VNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCC--------TTBCCEEEEEEEC-----
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCC--------CCccchhheeeecCcccc
Confidence            35799999999999999999976     34666655556667789999999988        66898888774322    


Q ss_pred             ------------------------------cCCeEEEEEeccCCccHHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHH
Q psy16752        146 ------------------------------VNGTHVCMVFEVLGHNLLKLIVK--SKYRGIPLENVRSIIRQILQGLNYL  193 (284)
Q Consensus       146 ------------------------------~~~~~~~iv~e~~~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~L  193 (284)
                                                    ....++++||||++++|.+.+..  .....+++..++.++.||+.||.||
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             --------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                          24556999999999988777764  2334699999999999999999999


Q ss_pred             hhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        194 HTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       194 H~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |++ ||+||||||+|||++.+++.++|+|||++...... .......||+.|+|||++.+..
T Consensus       158 H~~-gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~  217 (383)
T 3eb0_A          158 HSL-GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGAT  217 (383)
T ss_dssp             HTT-TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCS
T ss_pred             HHC-cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCC
Confidence            999 99999999999999766789999999999865443 2334567899999999987643

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.96  E-value=5.9e-29  Score=225.78  Aligned_cols=164  Identities=21%  Similarity=0.264  Sum_probs=136.1

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++++.||+|+||+||+|.++     +++|+...       ....+.+|..++..+.|        ++|+++++++.
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~h--------p~Iv~l~~~~~  131 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR--------RWITQLHFAFQ  131 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCT--------TTBCCEEEEEE
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCC--------CCeeeEEEEEe
Confidence            467999999999999999999863     35554321       23457789999998887        77999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|.+++.+.. ..+++..++.++.||+.||.|||++ |||||||||+|||++. .+.++|+
T Consensus       132 ----~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~-~g~vkL~  204 (412)
T 2vd5_A          132 ----DENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDR-CGHIRLA  204 (412)
T ss_dssp             ----CSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TSCEEEC
T ss_pred             ----eCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecC-CCCEEEe
Confidence                788999999999 788888887653 3599999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++........ .....+||+.|+|||++..
T Consensus       205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~  237 (412)
T 2vd5_A          205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA  237 (412)
T ss_dssp             CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHH
T ss_pred             echhheeccCCCccccceeccccCcCCHHHHhh
Confidence            9999876544332 2335789999999999974

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.96  E-value=7.4e-29  Score=224.02  Aligned_cols=175  Identities=20%  Similarity=0.283  Sum_probs=139.8

Q ss_pred             ccceeccceEEEEEecccCceeEEEecc----eeEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGS----KTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+.....+|++.+.||+|+||+||+|.+    ..+++..........+|+.+++.++|        +||+++++++...+
T Consensus        34 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h--------~niv~l~~~~~~~~  105 (394)
T 4e7w_A           34 TGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKH--------PNVVDLKAFFYSNG  105 (394)
T ss_dssp             SCCEEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCC--------TTBCCEEEEEEEES
T ss_pred             CCCcccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCC--------CCcceEEEEEEecC
Confidence            3455667899999999999999999976    23444444444555689999999988        67999998876433


Q ss_pred             --cCCeEEEEEeccCCccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        146 --VNGTHVCMVFEVLGHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       146 --~~~~~~~iv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                        ....++|+||||+.++++..+...  ....+++..++.++.||+.||.|||++ ||+||||||+|||++...+.++|+
T Consensus       106 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~  184 (394)
T 4e7w_A          106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLI  184 (394)
T ss_dssp             SSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEEC
T ss_pred             CCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEe
Confidence              245568899999998887766532  234599999999999999999999999 999999999999997567899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++....... ......||+.|+|||++.+.
T Consensus       185 DFG~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~  216 (394)
T 4e7w_A          185 DFGSAKILIAGE-PNVSYICSRYYRAPELIFGA  216 (394)
T ss_dssp             CCTTCEECCTTC-CCCSSCSCGGGCCHHHHTTC
T ss_pred             eCCCcccccCCC-CCcccccCcCccCHHHHcCC
Confidence            999997664442 33456789999999998654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.96  E-value=9.1e-29  Score=220.92  Aligned_cols=171  Identities=21%  Similarity=0.190  Sum_probs=136.1

Q ss_pred             eccceEEEEEecccCceeEEEec-----c-----eeEEEecC-CCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTG-----S-----KTQVLVSP-QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~-----~-----~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ..++|.+.+.||+|+||+||+|.     +     .+++|+.. .....+..|+.+++.+.+     ..|++++.+++.+.
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~-----~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP-----SMQHMFMKFYSAHL  137 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCG-----GGGGGBCCEEEEEE
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhh-----hhhhhhhhhheeee
Confidence            34679999999999999999994     2     23555543 334567788888888763     22578999888776


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC----
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKS---KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD----  214 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~----  214 (284)
                          .....|+||||+ +|+|.+++...   ....+++..+..++.||+.||.|||++ |||||||||+|||++.+    
T Consensus       138 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIll~~~~~~~  212 (365)
T 3e7e_A          138 ----FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQ  212 (365)
T ss_dssp             ----CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECGGGTCC
T ss_pred             ----cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEecccccCc
Confidence                778899999999 68888888753   234599999999999999999999999 99999999999999651    


Q ss_pred             ------CCcEEEEeccchhHhhh--CCCCCCcccCCCCccchhhhhhc
Q psy16752        215 ------EARVKTLALNATELAAT--GHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 ------~~~v~l~Dfg~a~~~~~--~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                            .+.++|+|||+|.....  ........+||+.|+|||++.+.
T Consensus       213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  260 (365)
T 3e7e_A          213 DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNK  260 (365)
T ss_dssp             ------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTC
T ss_pred             cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCC
Confidence                  58999999999965432  22233467899999999999765

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.96  E-value=6.2e-29  Score=229.07  Aligned_cols=177  Identities=23%  Similarity=0.350  Sum_probs=133.3

Q ss_pred             CCcccccccc---eeccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCC
Q psy16752         63 GGYHPVKIGM---LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVND  128 (284)
Q Consensus        63 ~~~~~~~~~~---~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~  128 (284)
                      ..++++.++.   .+.++|++++.||+|+||+||+|.+.     +++|+...      ....+.+|+.+++.++|     
T Consensus        46 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----  120 (464)
T 3ttj_A           46 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-----  120 (464)
T ss_dssp             CCEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCC-----
T ss_pred             ccceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCC-----
Confidence            3445555554   34578999999999999999999762     35554332      13456789999999988     


Q ss_pred             cccchhccccccceEec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCC
Q psy16752        129 PYRERVVQLLDDFKICG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP  206 (284)
Q Consensus       129 ~~~~~i~~l~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp  206 (284)
                         +||+++++.+....  .....+|+||||+++++.+.+..    .+++..+..++.||+.||.|||++ ||+||||||
T Consensus       121 ---pnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp  192 (464)
T 3ttj_A          121 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKP  192 (464)
T ss_dssp             ---TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCG
T ss_pred             ---CCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCh
Confidence               67999998775221  13467899999999998887743    389999999999999999999999 999999999


Q ss_pred             CCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        207 ENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       207 ~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++.+ +.++|+|||++...... ......+||+.|+|||++.+.
T Consensus       193 ~NIll~~~-~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  238 (464)
T 3ttj_A          193 SNIVVKSD-CTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  238 (464)
T ss_dssp             GGEEECTT-SCEEECCCCCC-----C-CCC----CCCTTCCHHHHTTC
T ss_pred             HhEEEeCC-CCEEEEEEEeeeecCCC-cccCCCcccccccCHHHHcCC
Confidence            99999554 89999999999876543 234467899999999998764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.96  E-value=9.7e-29  Score=217.08  Aligned_cols=160  Identities=24%  Similarity=0.421  Sum_probs=133.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..       ...+.+.+|..+++.+.|        ++|+++++.+. 
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~Iv~~~~~~~-   76 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH--------PFIIRMWGTFQ-   76 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB--------TTBCCEEEEEE-
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCC--------CCCceEeEEEE-
Confidence            46999999999999999999763     3555432       233556789999998887        77999999887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +++|.+.+....  .+++..++.++.||+.||.|||++ ||+||||||+|||++. ++.++|+|
T Consensus        77 ---~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~-~g~~kL~D  149 (318)
T 1fot_A           77 ---DAQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDK-NGHIKITD  149 (318)
T ss_dssp             ---CSSEEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECT-TSCEEECC
T ss_pred             ---eCCEEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcC-CCCEEEee
Confidence               788999999999 678888887643  599999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++.....   ...+.+||+.|+|||++.+.
T Consensus       150 fg~a~~~~~---~~~~~~gt~~y~aPE~~~~~  178 (318)
T 1fot_A          150 FGFAKYVPD---VTYTLCGTPDYIAPEVVSTK  178 (318)
T ss_dssp             CSSCEECSS---CBCCCCSCTTTCCHHHHTTC
T ss_pred             cCcceecCC---ccccccCCccccCHhHhcCC
Confidence            999875432   33467899999999998654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=1.2e-28  Score=229.34  Aligned_cols=169  Identities=27%  Similarity=0.410  Sum_probs=137.3

Q ss_pred             cceeccceEEEEEecccCceeEEEecce-----eEEEecC-----------------CCChhhHHHHHHHHhhhcCCCCC
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----------------QFPETALDEIKLLKCVRDGDVND  128 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----------------~~~~~~~~E~~~l~~l~~~~~~~  128 (284)
                      +..+.++|++++.||+|+||+||+|.++     .++|+..                 ...+.+.+|+.+++.++|     
T Consensus        31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----  105 (504)
T 3q5i_A           31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH-----  105 (504)
T ss_dssp             CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC-----
T ss_pred             CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC-----
Confidence            3445568999999999999999999862     3455432                 223567889999999988     


Q ss_pred             cccchhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        129 PYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       129 ~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                         +||+++++++.    ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+
T Consensus       106 ---pniv~~~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~  175 (504)
T 3q5i_A          106 ---PNIIKLFDVFE----DKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH-NIVHRDIKPE  175 (504)
T ss_dssp             ---TTBCCEEEEEE----CSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGG
T ss_pred             ---CCCCeEEEEEE----cCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHH
Confidence               67999999887    788999999999 678888887654  599999999999999999999999 9999999999


Q ss_pred             CeeEeeCC--CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        208 NVLLCVDE--ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       208 NIll~~~~--~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||++.++  ..++|+|||++...... ......+||+.|+|||++.+..
T Consensus       176 Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  224 (504)
T 3q5i_A          176 NILLENKNSLLNIKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKKKY  224 (504)
T ss_dssp             GEEESSTTCCSSEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTTCB
T ss_pred             HEEEecCCCCccEEEEECCCCEEcCCC-CccccccCCcCCCCHHHhccCC
Confidence            99996553  27999999998766543 2334567999999999987643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.96  E-value=6.9e-29  Score=218.75  Aligned_cols=165  Identities=23%  Similarity=0.353  Sum_probs=129.4

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++.+.||+|+||+||+|.+.     +++|+...      ....+.+|+.+++.++|        +||+++++.+. 
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~-  103 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH--------RNIIELKSVIH-  103 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCC--------TTBCCEEEEEE-
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCC--------CCcceEEEEEe-
Confidence            357999999999999999999752     35554422      23456789999999988        67999999877 


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC----CCcEE
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD----EARVK  219 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~----~~~v~  219 (284)
                         ....+|+||||+.++|.+++....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+    ...++
T Consensus       104 ---~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~k  177 (329)
T 3gbz_A          104 ---HNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLK  177 (329)
T ss_dssp             ---ETTEEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEE
T ss_pred             ---cCCEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEE
Confidence               678899999999999999887654  499999999999999999999999 99999999999999633    34699


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++.............+||+.|+|||++.+.
T Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  212 (329)
T 3gbz_A          178 IGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS  212 (329)
T ss_dssp             ECCTTHHHHHC-----------CCTTCCHHHHTTC
T ss_pred             ECcCCCccccCCcccccCCCcCCccccCHHHhcCC
Confidence            99999998776554455566889999999999763

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.1e-29  Score=221.54  Aligned_cols=165  Identities=19%  Similarity=0.313  Sum_probs=135.3

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .++|++.+.||+|+||+||+|.++     .+++.....   ...+.+|+.+++.++|        +||+++++.+.    
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~~~~~~~----   71 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH--------RNILHLHESFE----   71 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC--------TTBCCEEEEEE----
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCC--------CCCCeEeEEEe----
Confidence            457999999999999999999763     344443322   2446789999999988        67999999887    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-CCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-EARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-~~~v~l~Dfg  224 (284)
                      ....+|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ ++.++|+|||
T Consensus        72 ~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg  149 (321)
T 1tki_A           72 SMEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFG  149 (321)
T ss_dssp             ETTEEEEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred             cCCEEEEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence            677899999999 668888876543 3599999999999999999999999 99999999999999653 5899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++...... .......||+.|+|||++.+.
T Consensus       150 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  178 (321)
T 1tki_A          150 QARQLKPG-DNFRLLFTAPEYYAPEVHQHD  178 (321)
T ss_dssp             TCEECCTT-CEEEEEESCGGGSCHHHHTTC
T ss_pred             CCeECCCC-CccccccCChhhcCcHHhcCC
Confidence            98765543 223356799999999998765

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=6e-29  Score=225.07  Aligned_cols=176  Identities=22%  Similarity=0.266  Sum_probs=131.1

Q ss_pred             ccccceeccceEEE-EEecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         68 VKIGMLFNNRYRVT-RKLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        68 ~~~~~~~~~~y~i~-~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      +..+.++. +|.+. +.||+|+||+||+|.++     +++|+.. ....+.+|+.++.++.+       |+||+++++.+
T Consensus        54 ~~~~~~~~-~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~-~~~~~~~E~~~~~~~~~-------hp~iv~l~~~~  124 (400)
T 1nxk_A           54 IKKNAIID-DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-DCPKARREVELHWRASQ-------CPHIVRIVDVY  124 (400)
T ss_dssp             CBCSCGGG-TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEE-CSHHHHHHHHHHHHHTT-------STTBCCEEEEE
T ss_pred             cCCCcccc-cceeccceeeeccCeEEEEEEECCCCCEEEEEEeC-cchhHHHHHHHHHHhcC-------CCCcceEeEEE
Confidence            33444444 48776 78999999999999763     4566543 34567889988765532       37799999988


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARV  218 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v  218 (284)
                      ........++|+||||+ +|+|.+.+.......+++..+..++.||+.||.|||+. |||||||||+|||++.+  ++.+
T Consensus       125 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~  203 (400)
T 1nxk_A          125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAIL  203 (400)
T ss_dssp             EEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCE
T ss_pred             eecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccE
Confidence            75555678899999999 67898888765444699999999999999999999999 99999999999999653  5789


Q ss_pred             EEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|+|||++...... ....+.+||+.|+|||++.+.
T Consensus       204 kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  238 (400)
T 1nxk_A          204 KLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPE  238 (400)
T ss_dssp             EECCCTTCEECC------------CTTCCGGGSCCC
T ss_pred             EEEecccccccCCC-CccccCCCCCCccCHhhcCCC
Confidence            99999998754432 233467899999999998543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=2.5e-28  Score=222.90  Aligned_cols=176  Identities=28%  Similarity=0.432  Sum_probs=143.8

Q ss_pred             cccceeccceEEEEEecccCceeEEEecce-----eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         69 KIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        69 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ..+..+..+|++.+.||+|+||+||+|.+.     +++|+....   ...+.+|+.+++.+++..  +..+++|+.+++.
T Consensus        90 ~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~--~~~~~~iv~~~~~  167 (429)
T 3kvw_A           90 VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD--KDNTMNVIHMLEN  167 (429)
T ss_dssp             CTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTC--TTSCSCBCCEEEE
T ss_pred             cCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhcc--ccCCcCEEEEEee
Confidence            345667788999999999999999999762     355554432   245678999999998743  3446789999987


Q ss_pred             ceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC-cEE
Q psy16752        141 FKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA-RVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~-~v~  219 (284)
                      +.    ....+|+||||++++|.+.+.......+++..++.++.||+.||.|||++ |||||||||+|||++.++. .++
T Consensus       168 ~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vk  242 (429)
T 3kvw_A          168 FT----FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIK  242 (429)
T ss_dssp             EE----ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEE
T ss_pred             cc----cCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceE
Confidence            76    67889999999999999999887666699999999999999999999999 9999999999999966532 399


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++.....   ...+.+||+.|+|||++.+.
T Consensus       243 L~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~  274 (429)
T 3kvw_A          243 VIDFGSSCYEHQ---RVYTYIQSRFYRAPEVILGA  274 (429)
T ss_dssp             ECCCTTCEETTC---CCCSSCSCGGGCCHHHHHTB
T ss_pred             EeecccceecCC---cccccCCCCCccChHHHhCC
Confidence            999999865432   33466899999999998764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.96  E-value=3e-29  Score=230.65  Aligned_cols=166  Identities=20%  Similarity=0.286  Sum_probs=123.6

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++.+.||+|+||+||+|.++     +++|.....      .+.+.+|+.+++.++|        +||+++++++..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~l~~~~~~  123 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH--------DHVVKVLDIVIP  123 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC--------TTBCCEEEECCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCC--------CCCCceEEEEec
Confidence            467999999999999999999763     355544321      2457789999999988        679999987742


Q ss_pred             ec-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CG-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                      .. .....+|+||||++++|.+.+....  .+++..++.++.||+.||.|||++ |||||||||+||||+.+ +.++|+|
T Consensus       124 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~-~~~kl~D  199 (458)
T 3rp9_A          124 KDVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQD-CSVKVCD  199 (458)
T ss_dssp             SCTTTCCCEEEEECCCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTT-CCEEECC
T ss_pred             CCcccCceEEEEEeccccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCC-CCEeecc
Confidence            21 2446799999999999998886543  599999999999999999999999 99999999999999554 8999999


Q ss_pred             ccchhHhhhCC---------------------------CCCCcccCCCCccchhhhh
Q psy16752        223 LNATELAATGH---------------------------KLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       223 fg~a~~~~~~~---------------------------~~~~~~~gt~~~~aPE~l~  252 (284)
                      ||++.......                           ......+||+.|+|||++.
T Consensus       200 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~  256 (458)
T 3rp9_A          200 FGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL  256 (458)
T ss_dssp             CTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHT
T ss_pred             cccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhh
Confidence            99998654221                           1223567899999999874

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.96  E-value=8.5e-29  Score=217.07  Aligned_cols=165  Identities=27%  Similarity=0.375  Sum_probs=124.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++++.||+|+||+||+|.++     +++|...     .....+.+|+.+++.++|        +||+++++.+.   
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~---   73 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH--------ENIVRLYDVIH---   73 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCB--------TTBCCEEEEEC---
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCC--------CCcceEEEEEE---
Confidence            46999999999999999999763     3444432     223567899999999988        67999999876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSK----YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                       ....+|+||||+.++|.+.+....    ...+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+
T Consensus        74 -~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~-~~~kl~  150 (317)
T 2pmi_A           74 -TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKR-GQLKLG  150 (317)
T ss_dssp             -CTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTT-CCEEEC
T ss_pred             -ECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCC-CCEEEC
Confidence             778899999999999998887643    13489999999999999999999999 99999999999999544 899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.............+||+.|+|||++.+.
T Consensus       151 Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  183 (317)
T 2pmi_A          151 DFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS  183 (317)
T ss_dssp             CCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTC
T ss_pred             cCccceecCCCcccCCCCcccccccCchHhhCC
Confidence            999988765544444567899999999999653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.96  E-value=1.4e-28  Score=236.18  Aligned_cols=164  Identities=21%  Similarity=0.244  Sum_probs=137.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..       ...+.+..|..++..+.+       |++|+.++..|. 
T Consensus       341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~-------~~~i~~l~~~~~-  412 (674)
T 3pfq_A          341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK-------PPFLTQLHSCFQ-  412 (674)
T ss_dssp             TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTC-------CTTBCCEEEECB-
T ss_pred             cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccC-------CCeEEEEEEEEE-
Confidence            57999999999999999999873     3555532       234557788888887754       377999998887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+||||||+ +|+|...+....  .+++..++.|+.||+.||.|||++ |||||||||+||||+.+ +.++|+|
T Consensus       413 ---~~~~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~-g~ikL~D  485 (674)
T 3pfq_A          413 ---TMDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSE-GHIKIAD  485 (674)
T ss_dssp             ---CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSS-SCEEECC
T ss_pred             ---eCCEEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCC-CcEEEee
Confidence               788999999999 778888887654  599999999999999999999999 99999999999999554 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++...........+++||+.|+|||++.+.
T Consensus       486 FGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~  517 (674)
T 3pfq_A          486 FGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ  517 (674)
T ss_dssp             CTTCEECCCTTCCBCCCCSCSSSCCHHHHTCC
T ss_pred             cceeeccccCCcccccccCCCcccCHhhhcCC
Confidence            99998655444556678999999999998653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.96  E-value=1.2e-28  Score=224.55  Aligned_cols=169  Identities=20%  Similarity=0.276  Sum_probs=137.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc--CC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~--~~  148 (284)
                      .+|++.+.||+|+||+||+|.++     +++|..........+|+.+++.++|        +||+++++++...+.  ..
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~h--------pniv~l~~~~~~~~~~~~~  125 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH--------CNIVRLRYFFYSSGEKKDE  125 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCC--------TTBCCEEEEEEEEETTTTE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCC--------CCccceeeEEeccCCCCcc
Confidence            46999999999999999999872     3566555555566789999999988        669999887754332  34


Q ss_pred             eEEEEEeccCCccHHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        149 THVCMVFEVLGHNLLKLIVK--SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       149 ~~~~iv~e~~~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      .++++||||+.+++.+.+..  .....+++..+..++.||+.||.|||++ ||+||||||+||||+.+.+.++|+|||++
T Consensus       126 ~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          126 VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSA  204 (420)
T ss_dssp             EEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             eeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCCeEEeccchhh
Confidence            56789999999888877654  2234699999999999999999999999 99999999999999767678999999999


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ....... .....+||+.|+|||++.+.
T Consensus       205 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~  231 (420)
T 1j1b_A          205 KQLVRGE-PNVSYICSRYYRAPELIFGA  231 (420)
T ss_dssp             EECCTTC-CCCSCCSCTTSCCHHHHTTC
T ss_pred             hhcccCC-CceeeeeCCCcCCHHHHcCC
Confidence            8654432 23456799999999998653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=1.9e-28  Score=219.52  Aligned_cols=167  Identities=16%  Similarity=0.233  Sum_probs=134.1

Q ss_pred             eccceEEEEEecccCceeEEEecce------------eEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK------------TQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVV  135 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~------------~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~  135 (284)
                      ..++|++.+.||+|+||+||+|.+.            +++|+....     ...+.+|+.+++.+ +|        +||+
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------pnIv  150 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--------KNII  150 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCC--------TTBC
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCC--------CCEe
Confidence            3467999999999999999999752            455554332     23578899999999 66        7799


Q ss_pred             cccccceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcE
Q psy16752        136 QLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------------RGIPLENVRSIIRQILQGLNYLHTKCRII  200 (284)
Q Consensus       136 ~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~giv  200 (284)
                      ++++.+.    ....+|+||||+ +|+|.+++.....              ..+++..+..++.||+.||.|||++ ||+
T Consensus       151 ~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~iv  225 (370)
T 2psq_A          151 NLLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCI  225 (370)
T ss_dssp             CEEEEEC----SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEE
T ss_pred             eEEEEEc----cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-Cee
Confidence            9999776    677899999999 6788888876431              2478999999999999999999999 999


Q ss_pred             ecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        201 HTDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       201 HrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||||||+|||++. ++.++|+|||++.........  .....+|+.|+|||++.+.
T Consensus       226 HrDlkp~NIll~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  280 (370)
T 2psq_A          226 HRDLAARNVLVTE-NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR  280 (370)
T ss_dssp             CSCCCGGGEEECT-TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTC
T ss_pred             ccccchhhEEECC-CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCC
Confidence            9999999999954 489999999998865543322  2344678899999998654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.96  E-value=2.3e-28  Score=216.53  Aligned_cols=182  Identities=25%  Similarity=0.452  Sum_probs=146.0

Q ss_pred             CCCcccccccceeccceEEEEEecccCceeEEEecc------eeEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccc
Q psy16752         62 KGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS------KTQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRE  132 (284)
Q Consensus        62 ~~~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~------~~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~  132 (284)
                      .++..++.+|.++.++|++.+.||+|+||+||+|.+      .+++|+...   ....+.+|+.+++.+.|++..+  +.
T Consensus         5 ~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~--~~   82 (355)
T 2eu9_A            5 KEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN--KF   82 (355)
T ss_dssp             TTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTS--CS
T ss_pred             cCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCC--ce
Confidence            345677889999999999999999999999999965      235555432   2345778999999998854221  12


Q ss_pred             hhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe
Q psy16752        133 RVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC  212 (284)
Q Consensus       133 ~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~  212 (284)
                      .++.+++.+.    ....+|+||||+++++++.+.......+++..+..++.||+.||.|||++ ||+||||||+|||+.
T Consensus        83 ~~~~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~  157 (355)
T 2eu9_A           83 LCVLMSDWFN----FHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFV  157 (355)
T ss_dssp             CBCCEEEEEE----ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEES
T ss_pred             eEEEeeeeee----eCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEe
Confidence            3666666655    56789999999999999998877655699999999999999999999999 999999999999993


Q ss_pred             ------------------eCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        213 ------------------VDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       213 ------------------~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                                        ...+.++|+|||++.....   ......||+.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~  213 (355)
T 2eu9_A          158 NSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE---HHTTIVATRHYRPPEVILE  213 (355)
T ss_dssp             CCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS---CCCSSCSCGGGCCHHHHTT
T ss_pred             cccccccccccccccccccCCCcEEEeecCccccccc---cccCCcCCCcccCCeeeec
Confidence                              2357999999999875433   2345689999999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=1.1e-28  Score=219.46  Aligned_cols=160  Identities=21%  Similarity=0.337  Sum_probs=134.2

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||.||+|.++     +++|+..       ...+.+.+|+.+++.+.|        ++|+++++.+. 
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~-  111 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF--------PFLVKLEFSFK-  111 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC--------TTBCCEEEEEE-
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEEE-
Confidence            47999999999999999999763     3555431       233567789999999887        67999988877 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +++|.+.+....  .+++..++.++.||+.||.|||++ ||+||||||+|||++. ++.++|+|
T Consensus       112 ---~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~-~g~~kL~D  184 (350)
T 1rdq_E          112 ---DNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQ-QGYIQVTD  184 (350)
T ss_dssp             ---CSSEEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TSCEEECC
T ss_pred             ---cCCEEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECC-CCCEEEcc
Confidence               788999999999 788888887654  499999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++.....   ...+.+||+.|+|||++.+.
T Consensus       185 Fg~a~~~~~---~~~~~~gt~~y~aPE~~~~~  213 (350)
T 1rdq_E          185 FGFAKRVKG---RTWTLCGTPEALAPEIILSK  213 (350)
T ss_dssp             CTTCEECSS---CBCCCEECGGGCCHHHHTTC
T ss_pred             cccceeccC---CcccccCCccccCHHHhcCC
Confidence            999875533   23467899999999998754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=2.2e-28  Score=216.71  Aligned_cols=164  Identities=18%  Similarity=0.260  Sum_probs=131.0

Q ss_pred             ccceEEEEEecccCceeEEEecce----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|++.+.||+|+||.||+|.+.    +++|+....      ...+.+|+.+++.+.|..      ++|+++++++.  
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~------~~iv~~~~~~~--   79 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS------DKIIRLYDYEI--   79 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTC------TTBCCEEEEEE--
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcC------CceEEEeeeEe--
Confidence            467999999999999999999762    355543221      245678999999998732      67999998776  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ....+|+|||+.+++|.+++....  .+++..+..++.||+.||.|||++ ||+||||||+|||++  ++.++|+|||
T Consensus        80 --~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~--~~~~kl~DFG  152 (343)
T 3dbq_A           80 --TDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFG  152 (343)
T ss_dssp             --CSSEEEEEECCCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE--TTEEEECCCS
T ss_pred             --eCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE--CCcEEEeecc
Confidence              778999999988999999987754  599999999999999999999999 999999999999994  3789999999


Q ss_pred             chhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++........  .....+||+.|+|||++.+
T Consensus       153 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  183 (343)
T 3dbq_A          153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKD  183 (343)
T ss_dssp             SSCCC------------CCCCSSCCHHHHHH
T ss_pred             cccccCcccccccCCCCcCCcCcCCHHHHhh
Confidence            9876544332  2336689999999999975

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.96  E-value=2.9e-28  Score=214.33  Aligned_cols=180  Identities=26%  Similarity=0.424  Sum_probs=145.8

Q ss_pred             cccccccceeccceEEEEEecccCceeEEEecc------eeEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhc
Q psy16752         65 YHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS------KTQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVV  135 (284)
Q Consensus        65 ~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~------~~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~  135 (284)
                      ...+..|+++.++|++.+.||+|+||+||+|.+      .+++|+....   .+.+.+|+.+++.+.|++..  .+++++
T Consensus         3 ~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~--~~~~i~   80 (339)
T 1z57_A            3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN--STFRCV   80 (339)
T ss_dssp             GGTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTT--CTTCBC
T ss_pred             ceeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCC--CceeeE
Confidence            345677899999999999999999999999965      2355554332   35578899999999985422  234578


Q ss_pred             cccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-
Q psy16752        136 QLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-  214 (284)
Q Consensus       136 ~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-  214 (284)
                      ++++++.    ....+|+||||++++|.+.+.......+++..+..++.||+.||.|||++ ||+||||||+|||++.+ 
T Consensus        81 ~~~~~~~----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~  155 (339)
T 1z57_A           81 QMLEWFE----HHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSD  155 (339)
T ss_dssp             CEEEEEE----ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCC
T ss_pred             eeecccc----cCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccc
Confidence            8888776    67799999999999999999877655689999999999999999999999 99999999999999653 


Q ss_pred             -----------------CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        215 -----------------EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 -----------------~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                                       .+.++|+|||++.....   ......||+.|+|||++.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~  209 (339)
T 1z57_A          156 YTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYRAPEVILAL  209 (339)
T ss_dssp             EEEEEC----CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGCCHHHHTTS
T ss_pred             cccccCCccccccccccCCCceEeeCcccccCcc---ccccccCCccccChHHhhCC
Confidence                             35799999999875433   23456899999999998653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.96  E-value=1.3e-28  Score=215.39  Aligned_cols=167  Identities=22%  Similarity=0.279  Sum_probs=124.8

Q ss_pred             eccceEEEEEecccCceeEEEecce---eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ..++|++.+.||+|+||+||+|.+.   +++|+....      ...+.+|+.+++.++|        +||+++++.+.  
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~--  104 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH--------PNIVLFMGAVT--  104 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEC--
T ss_pred             ChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEE--
Confidence            3457999999999999999999763   355543322      1346789999999988        67999998776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCeeEeeCCCcEEE
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIll~~~~~~v~l  220 (284)
                        ....+++||||+ +++|.+.+..... ..+++..+..++.||+.||.|||++ |  |+||||||+|||++. ++.++|
T Consensus       105 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~-~~~~kL  180 (309)
T 3p86_A          105 --QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDK-KYTVKV  180 (309)
T ss_dssp             --STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECT-TCCEEE
T ss_pred             --ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeC-CCcEEE
Confidence              677899999999 6688887765421 1289999999999999999999999 9  999999999999954 489999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++..............||+.|+|||++.+.
T Consensus       181 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  214 (309)
T 3p86_A          181 CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE  214 (309)
T ss_dssp             CCCC-----------------CCTTSCHHHHTTC
T ss_pred             CCCCCCccccccccccccCCCCccccChhhhcCC
Confidence            9999998665554445567899999999998764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.96  E-value=5.1e-29  Score=228.48  Aligned_cols=165  Identities=22%  Similarity=0.321  Sum_probs=126.3

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ..++|++++.||+|+||.||+|.++     +++|+..       .....+.+|+.+++.++|        +||+.+++.+
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~l~~~~  217 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH--------PFLTALKYSF  217 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSC--------TTSCCEEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCC--------CeEeeEEEEE
Confidence            3467999999999999999999762     3555432       223456678888888877        6799999887


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      .    ....+|+||||+ +++|...+....  .+++..+..++.||+.||.|||+ . |||||||||+||||+.+ +.++
T Consensus       218 ~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~~-~~~k  289 (446)
T 4ejn_A          218 Q----THDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKD-GHIK  289 (446)
T ss_dssp             E----ETTEEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECSS-SCEE
T ss_pred             e----eCCEEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECCC-CCEE
Confidence            7    677899999999 668877776654  59999999999999999999998 8 99999999999999554 8999


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++...........+.+||+.|+|||++.+.
T Consensus       290 l~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  324 (446)
T 4ejn_A          290 ITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN  324 (446)
T ss_dssp             ECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTS
T ss_pred             EccCCCceeccCCCcccccccCCccccCHhhcCCC
Confidence            99999998655544555678899999999998654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.96  E-value=2e-28  Score=228.96  Aligned_cols=166  Identities=25%  Similarity=0.305  Sum_probs=137.9

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|.+.+.||+|+||+||+|.++     +++|+..       .....+.+|+.+++.+.|        ++|+++++.+.
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~h--------p~Iv~l~~~~~  255 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS--------RFIVSLAYAFE  255 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC--------TTBCCEEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCC--------CCEeeEEEEEe
Confidence            357999999999999999999763     3455432       223557789999999987        67999998877


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                          ....+|+||||+ +|+|...+....  ...+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++
T Consensus       256 ----~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~-~g~vk  329 (543)
T 3c4z_A          256 ----TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDD-DGNVR  329 (543)
T ss_dssp             ----CSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECT-TSCEE
T ss_pred             ----eCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeC-CCCEE
Confidence                778899999999 678888776543  23599999999999999999999999 9999999999999954 48999


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++...........+.+||+.|+|||++.+.
T Consensus       330 L~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~  364 (543)
T 3c4z_A          330 ISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE  364 (543)
T ss_dssp             ECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTC
T ss_pred             EeecceeeeccCCCcccccccCCccccChhhhcCC
Confidence            99999998766554455567999999999999764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=2.1e-28  Score=213.57  Aligned_cols=165  Identities=18%  Similarity=0.268  Sum_probs=132.4

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .++|++.+.||+|+||+||+|.++     .++|....    ..+.+.+|+.+++.++|        +||+++++++.   
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~---   77 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH--------PNVLKFIGVLY---   77 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEE---
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC--------cCcccEEEEEe---
Confidence            467999999999999999999863     34444322    23457789999999987        67999999876   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||
T Consensus        78 -~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~-~~~~kl~Dfg  153 (310)
T 3s95_A           78 -KDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRE-NKNVVVADFG  153 (310)
T ss_dssp             -ETTEEEEEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECT-TSCEEECCCT
T ss_pred             -cCCeeEEEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECC-CCCEEEeecc
Confidence             678899999999 668877776543 4599999999999999999999999 9999999999999954 5899999999


Q ss_pred             chhHhhhCCCC--------------CCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKL--------------PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~--------------~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++.........              ....+||+.|+|||++.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  197 (310)
T 3s95_A          154 LARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR  197 (310)
T ss_dssp             TCEECC--------------------CCCCSCGGGCCHHHHTTC
T ss_pred             cceecccccccccccccccccccccccccCCCcceeCHHHhcCC
Confidence            98754332211              1256899999999998764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.96  E-value=2e-28  Score=223.78  Aligned_cols=167  Identities=22%  Similarity=0.328  Sum_probs=131.1

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +.++|++.+.||+|+||+||+|.++     +++|.....      .+.+.+|+.+++.++|        +||+++++.+.
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~nIv~l~~~~~   95 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS--------DYIIRLYDLII   95 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCC--------TTBCCEEEECC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCC--------CCcceEEEEEe
Confidence            3468999999999999999999762     455554322      2457789999999988        66999988775


Q ss_pred             Eec-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICG-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ... .....+|+||||++++|.+.+....  .+++..++.++.||+.||.|||++ ||+||||||+|||++.+ +.++|+
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~-~~~kL~  171 (432)
T 3n9x_A           96 PDDLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQD-CSVKVC  171 (432)
T ss_dssp             CSCTTTCCCEEEEEECCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTT-CCEEEC
T ss_pred             cCCCCcCCeEEEEEecCCcCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCC-CCEEEc
Confidence            211 1226799999999999998886543  599999999999999999999999 99999999999999544 899999


Q ss_pred             eccchhHhhhCCC----------------------CCCcccCCCCccchhhhh
Q psy16752        222 ALNATELAATGHK----------------------LPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       222 Dfg~a~~~~~~~~----------------------~~~~~~gt~~~~aPE~l~  252 (284)
                      |||++........                      .....+||+.|+|||++.
T Consensus       172 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~  224 (432)
T 3n9x_A          172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL  224 (432)
T ss_dssp             CCTTCEEC-------------------------------CCCCCTTCCHHHHT
T ss_pred             cCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHh
Confidence            9999886543321                      234678999999999874

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=1.4e-28  Score=228.00  Aligned_cols=165  Identities=26%  Similarity=0.402  Sum_probs=136.6

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +.++|++.+.||+|+||+||+|.++     +++|+.      ......+.+|+.+++.++|        +||+++++++.
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~   91 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH--------PNIMKLFEILE   91 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCC--------CCcCeEEEEEE
Confidence            4567999999999999999999863     355553      2334567899999999988        67999999877


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARVK  219 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v~  219 (284)
                          ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ |||||||||+|||++..  .+.++
T Consensus        92 ----~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~k  164 (486)
T 3mwu_A           92 ----DSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIK  164 (486)
T ss_dssp             ----CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEE
T ss_pred             ----cCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEE
Confidence                788999999999 778888887664  599999999999999999999999 99999999999999643  35899


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++...... ......+||+.|+|||++.+.
T Consensus       165 l~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  198 (486)
T 3mwu_A          165 IIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRGT  198 (486)
T ss_dssp             ECSCSCTTTBCCC-----CCTTGGGGCCGGGGGSC
T ss_pred             EEECCcCeECCCC-CccCCCcCCCCCCCHHHhCCC
Confidence            9999998765443 233456799999999999765

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=2.2e-28  Score=218.40  Aligned_cols=165  Identities=24%  Similarity=0.345  Sum_probs=128.6

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC---CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP---QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .++|++++.||+|+||+||+|.++     +++|+..   ...+.+.+|+.+++.++|        +||+++++++.    
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~----   86 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH--------PNIVRFKEVIL----   86 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCC--------TTBCCEEEEEE----
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCC--------CCCCcEEEEEe----
Confidence            467999999999999999999873     3555432   235678899999999988        67999999877    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC-CcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE-ARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~-~~v~l~Dfg  224 (284)
                      ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+. +.++|+|||
T Consensus        87 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~~~~kl~Dfg  163 (361)
T 3uc3_A           87 TPTHLAIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFG  163 (361)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred             eCCEEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence            778899999999 778888887654  599999999999999999999999 999999999999996542 359999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ++...... ......+||+.|+|||++.+.-
T Consensus       164 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  193 (361)
T 3uc3_A          164 YSKSSVLH-SQPKSTVGTPAYIAPEVLLRQE  193 (361)
T ss_dssp             CC----------------CTTSCHHHHHCSS
T ss_pred             cccccccc-CCCCCCcCCCCcCChhhhcCCC
Confidence            98754333 2334567999999999997654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=5.1e-29  Score=216.27  Aligned_cols=165  Identities=24%  Similarity=0.394  Sum_probs=129.2

Q ss_pred             ccceEEEEEecccCceeEEEecc-----eeEEEecCCC------------------------------ChhhHHHHHHHH
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQF------------------------------PETALDEIKLLK  119 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~------------------------------~~~~~~E~~~l~  119 (284)
                      .++|++.+.||+|+||.||+|.+     .+++|+....                              .+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            35799999999999999999975     2345543211                              255789999999


Q ss_pred             hhhcCCCCCcccchhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q psy16752        120 CVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR  198 (284)
Q Consensus       120 ~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g  198 (284)
                      .++|        +||+++++.+.  ......+|+||||+ +++|.+.+ .  ...+++..+..++.||+.||.|||++ |
T Consensus        92 ~l~h--------~~iv~~~~~~~--~~~~~~~~lv~e~~~~~~l~~~~-~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~  157 (298)
T 2zv2_A           92 KLDH--------PNVVKLVEVLD--DPNEDHLYMVFELVNQGPVMEVP-T--LKPLSEDQARFYFQDLIKGIEYLHYQ-K  157 (298)
T ss_dssp             TCCC--------TTBCCEEEEEE--CSSSSEEEEEEECCTTCBSCCSS-C--SSCCCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             hCCC--------CCCCeEEEEEE--cCCCCEEEEEEecCCCCcHHHHh-h--cCCCCHHHHHHHHHHHHHHHHHHHHC-C
Confidence            9988        67999988765  22367899999999 45555432 2  23599999999999999999999999 9


Q ss_pred             cEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        199 IIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       199 ivHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+||||||+|||++.+ +.++|+|||++..............||+.|+|||++.+.
T Consensus       158 ivH~Dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  212 (298)
T 2zv2_A          158 IIHRDIKPSNLLVGED-GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSET  212 (298)
T ss_dssp             EECCCCCGGGEEECTT-SCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTT
T ss_pred             eeccCCCHHHEEECCC-CCEEEecCCCccccccccccccCCcCCccccChhhhccC
Confidence            9999999999999544 899999999987665544444567899999999998654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=3.8e-29  Score=225.20  Aligned_cols=167  Identities=22%  Similarity=0.350  Sum_probs=124.8

Q ss_pred             ceeccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhh-cCCCCCcccchhccccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVR-DGDVNDPYRERVVQLLD  139 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~  139 (284)
                      ..+.++|++++.||+|+||+||+|.++     +++|....      ......+|+.+++.+. |        +||+++++
T Consensus         5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h--------~niv~l~~   76 (388)
T 3oz6_A            5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH--------ENIVNLLN   76 (388)
T ss_dssp             HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTC--------TTBCCEEE
T ss_pred             CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCC--------CCCCeeee
Confidence            344568999999999999999999762     35554322      1344678999999987 6        77999998


Q ss_pred             cceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        140 DFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      .+.  ......+|+||||++++|...+...   .+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++
T Consensus        77 ~~~--~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~-~~~k  149 (388)
T 3oz6_A           77 VLR--ADNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLNAE-CHVK  149 (388)
T ss_dssp             EEE--CTTSSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTT-CCEE
T ss_pred             EEe--cCCCCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEcCC-CCEE
Confidence            775  1244579999999999998888764   489999999999999999999999 99999999999999554 8999


Q ss_pred             EEeccchhHhhhC---------------------CCCCCcccCCCCccchhhhhh
Q psy16752        220 TLALNATELAATG---------------------HKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       220 l~Dfg~a~~~~~~---------------------~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |+|||+|......                     .......+||+.|+|||++.+
T Consensus       150 l~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (388)
T 3oz6_A          150 VADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG  204 (388)
T ss_dssp             ECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred             ecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence            9999998754321                     112235689999999999976

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.96  E-value=2.1e-28  Score=213.79  Aligned_cols=172  Identities=20%  Similarity=0.257  Sum_probs=130.1

Q ss_pred             cceeccceEEEEEecccCceeEEEecc-----eeEEEecCCCC-------hhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQFP-------ETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~~-------~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      ...+.++|++.+.||+|+||.||+|.+     .+++|+.....       ..+.+|+.+++.+.|        +||++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~   78 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH--------PAIVAVY   78 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCC--------TTBCCEE
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCC--------CCcceEE
Confidence            345667899999999999999999986     23555543321       245678888888877        7799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+..........|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~-~~  154 (311)
T 3ork_A           79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISAT-NA  154 (311)
T ss_dssp             EEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEETT-SC
T ss_pred             EeeeccCCCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEcCC-CC
Confidence            98875555556779999999 678888776654  599999999999999999999999 99999999999999554 89


Q ss_pred             EEEEeccchhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|+|||++........   .....+||+.|+|||++.+.
T Consensus       155 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  194 (311)
T 3ork_A          155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD  194 (311)
T ss_dssp             EEECCCSCC------------------CCTTCCHHHHHTC
T ss_pred             EEEeeccCcccccccccccccccccCcCcccCCHHHhcCC
Confidence            99999999876544322   22356799999999998764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=2.7e-28  Score=209.70  Aligned_cols=174  Identities=18%  Similarity=0.212  Sum_probs=141.7

Q ss_pred             ccceeccceEEEEEecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++..+.++|++.+.||+|+||.||+|.+.     .++|........+.+|+.+++.+.|        +||+++++.+...
T Consensus         5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~~~   76 (284)
T 2a19_B            5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDH--------VNIVHYNGCWDGF   76 (284)
T ss_dssp             CCHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCC--------TTBCCEEEEEEEE
T ss_pred             ccchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCC--------CCEEEEeeeEecc
Confidence            44556678999999999999999999763     4666666667789999999999988        6688888766421


Q ss_pred             c------------cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        145 G------------VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       145 ~------------~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      .            .....+|+||||+ +++|.+++.......+++..+..++.||+.||.|||++ ||+||||||+|||+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~  155 (284)
T 2a19_B           77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFL  155 (284)
T ss_dssp             EEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEE
T ss_pred             ccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEE
Confidence            1            1356789999999 56888888765445699999999999999999999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        212 CVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.+ +.++|+|||++....... ......||+.|+|||++.+.
T Consensus       156 ~~~-~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  196 (284)
T 2a19_B          156 VDT-KQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQ  196 (284)
T ss_dssp             EET-TEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCS
T ss_pred             cCC-CCEEECcchhheeccccc-cccccCCcccccChhhhccC
Confidence            655 799999999987655432 33456799999999998654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.95  E-value=2e-28  Score=215.61  Aligned_cols=165  Identities=24%  Similarity=0.393  Sum_probs=134.9

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC----------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +.++|++.+.||+|+||.||+|.++     .++|+...          ..+.+.+|+.+++.++|        +||++++
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~   80 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH--------PNVITLH   80 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCC--------TTBCCEE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCC--------CCCCcEE
Confidence            4457999999999999999999763     34444322          13457899999999988        6799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC-
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA-  216 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~-  216 (284)
                      +.+.    ....+|+||||+ +++|.+.+...  ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++. 
T Consensus        81 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~  153 (326)
T 2y0a_A           81 EVYE----NKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVP  153 (326)
T ss_dssp             EEEE----CSSEEEEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSS
T ss_pred             EEEE----eCCEEEEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCC
Confidence            8877    778899999999 67888887554  3599999999999999999999999 9999999999999965532 


Q ss_pred             --cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 --RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 --~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                        .++|+|||++....... .....+||+.|+|||++.+.
T Consensus       154 ~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~  192 (326)
T 2y0a_A          154 KPRIKIIDFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYE  192 (326)
T ss_dssp             SCCEEECCCTTCEECCTTS-CCCCCCSCTTTCCHHHHTTC
T ss_pred             CCCEEEEECCCCeECCCCC-ccccccCCcCcCCceeecCC
Confidence              89999999987654432 33456799999999998654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=2.1e-28  Score=229.68  Aligned_cols=166  Identities=24%  Similarity=0.293  Sum_probs=137.1

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEec-------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ..++|++.+.||+|+||.||+|.++     +++|+.       ......+.+|+.+++.+.|        ++|+++++.+
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~h--------p~Iv~l~~~~  253 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS--------RFVVSLAYAY  253 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC--------TTBCCEEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCC--------CCEeeEEEEE
Confidence            3467999999999999999999763     355543       1223457789999999988        6799999887


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    ....+|+||||+ +|+|.+.+.......+++..+..++.||+.||.|||++ |||||||||+|||++. ++.++|
T Consensus       254 ~----~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~-~g~vKL  327 (576)
T 2acx_A          254 E----TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDD-HGHIRI  327 (576)
T ss_dssp             E----CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECT-TSCEEE
T ss_pred             e----eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeC-CCCeEE
Confidence            7    788999999999 77888888765544599999999999999999999999 9999999999999954 489999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++....... ...+.+||+.|+|||++.+.
T Consensus       328 ~DFGla~~~~~~~-~~~~~~GT~~Y~APEvl~~~  360 (576)
T 2acx_A          328 SDLGLAVHVPEGQ-TIKGRVGTVGYMAPEVVKNE  360 (576)
T ss_dssp             CCCTTCEECCTTC-CEECCCSCGGGCCHHHHTTC
T ss_pred             EecccceecccCc-cccccCCCccccCHHHHcCC
Confidence            9999987654432 23356899999999998763

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.95  E-value=3e-28  Score=226.22  Aligned_cols=165  Identities=25%  Similarity=0.411  Sum_probs=134.0

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +.++|++++.||+|+||+||+|.++     .++|+.      ......+.+|+.+++.+.|        +||+++++++.
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~  106 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH--------PNIMKLYDFFE  106 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCC--------TTBCCEEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCC--------CCCCeEEEEEE
Confidence            4457999999999999999999873     345443      2235668899999999988        77999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARVK  219 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v~  219 (284)
                          ....+|+||||+ +|+|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++..  .+.++
T Consensus       107 ----~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~k  179 (494)
T 3lij_A          107 ----DKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIK  179 (494)
T ss_dssp             ----CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEE
T ss_pred             ----eCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCCCCCcEE
Confidence                788899999999 778888887664  499999999999999999999999 99999999999999654  34699


Q ss_pred             EEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++...... ......+||+.|+|||++.+.
T Consensus       180 l~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~~~  213 (494)
T 3lij_A          180 IVDFGLSAVFENQ-KKMKERLGTAYYIAPEVLRKK  213 (494)
T ss_dssp             ECCCTTCEECBTT-BCBCCCCSCTTTCCHHHHTTC
T ss_pred             EEECCCCeECCCC-ccccccCCCcCeeCHHHHccc
Confidence            9999998765543 334466899999999998754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=9.6e-29  Score=217.47  Aligned_cols=165  Identities=26%  Similarity=0.407  Sum_probs=133.3

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|++.+.||+|+||+||+|.++     .++|+..     ...+.+.+|+.+++.++|        +||+++++.+.  
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~~~~~~~--   75 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH--------ENVVKFYGHRR--   75 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCC--------TTBCCEEEEEE--
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCC--------CCCCeEEEEEe--
Confidence            357999999999999999999763     3555432     123567899999999988        67999999776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        .....|+||||+ +++|.+.+...  ..+++..+..++.||+.||.|||+. ||+||||||+|||++. .+.++|+||
T Consensus        76 --~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~-~~~~kl~Df  149 (323)
T 3tki_A           76 --EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDF  149 (323)
T ss_dssp             --CSSEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TCCEEECCC
T ss_pred             --cCCeEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeC-CCCEEEEEe
Confidence              788999999999 66777776543  3599999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCC--CCCCcccCCCCccchhhhhhcc
Q psy16752        224 NATELAATGH--KLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       224 g~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |++.......  ......+||+.|+|||++.+.-
T Consensus       150 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  183 (323)
T 3tki_A          150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE  183 (323)
T ss_dssp             TTCEECEETTEECCBCSCCSCGGGSCHHHHHCSS
T ss_pred             eccceeccCCcccccCCCccCcCccCcHHhccCC
Confidence            9987554322  2234678999999999997653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.95  E-value=1.2e-28  Score=228.18  Aligned_cols=169  Identities=29%  Similarity=0.426  Sum_probs=139.9

Q ss_pred             cceeccceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +..+.++|++.+.||+|+||+||+|.++     +++|+..       .....+.+|+.+++.+.|        +||++++
T Consensus        21 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~   92 (484)
T 3nyv_A           21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH--------PNIMKLY   92 (484)
T ss_dssp             CCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCC--------TTBCCEE
T ss_pred             CCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCC--------CCCCcEE
Confidence            4456678999999999999999999873     4555532       234567899999999987        6799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee--CC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV--DE  215 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~--~~  215 (284)
                      +++.    ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.  ..
T Consensus        93 ~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~  165 (484)
T 3nyv_A           93 EFFE----DKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKD  165 (484)
T ss_dssp             EEEE----CSSEEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTT
T ss_pred             EEEE----eCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCC
Confidence            9887    788999999999 778888887654  599999999999999999999999 9999999999999953  35


Q ss_pred             CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        216 ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +.++|+|||++...... ......+||+.|+|||++.+..
T Consensus       166 ~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  204 (484)
T 3nyv_A          166 ANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGTY  204 (484)
T ss_dssp             CCEEECCTTHHHHBCCC-CSHHHHTTGGGTCCHHHHHTCC
T ss_pred             CcEEEEeeeeeEEcccc-cccccCCCCccccCceeecCCC
Confidence            78999999998866543 2334567999999999987643

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=2e-28  Score=212.28  Aligned_cols=173  Identities=15%  Similarity=0.188  Sum_probs=135.0

Q ss_pred             cceeccceEEEEEecccCceeEEEecce---eEEEecCC-CChhhHHHHHHHHh--hhcCCCCCcccchhccccccceEe
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ-FPETALDEIKLLKC--VRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~-~~~~~~~E~~~l~~--l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +..+.++|++.+.||+|+||+||+|.+.   +++|+... ....+..|..++..  ++|        +||+++++.+...
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h--------~niv~~~~~~~~~   74 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH--------ENILGFIASDMTS   74 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCC--------TTBCCEEEEEEEE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccC--------cCeeeEEEeeccc
Confidence            3456678999999999999999999763   34554332 23445667777776  555        7799998876644


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCcEecCCCCCCeeEeeCC
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLH--------TKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~givHrDiKp~NIll~~~~  215 (284)
                      ......+|+||||+ +++|.+++...   .+++..+..++.||+.||.|||        +. +|+||||||+|||++. +
T Consensus        75 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nill~~-~  149 (301)
T 3q4u_A           75 RHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKK-N  149 (301)
T ss_dssp             ETTEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCGGGEEECT-T
T ss_pred             cCCCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCChHhEEEcC-C
Confidence            55667899999999 66888887433   4999999999999999999999        88 9999999999999954 4


Q ss_pred             CcEEEEeccchhHhhhCCCC----CCcccCCCCccchhhhhhccc
Q psy16752        216 ARVKTLALNATELAATGHKL----PVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~~----~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      +.++|+|||++.........    ....+||+.|+|||++.+...
T Consensus       150 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  194 (301)
T 3q4u_A          150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ  194 (301)
T ss_dssp             SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCC
T ss_pred             CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCC
Confidence            89999999998755443222    234589999999999987643

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.95  E-value=1e-28  Score=217.26  Aligned_cols=164  Identities=26%  Similarity=0.342  Sum_probs=129.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++++.||+|+||+||+|.++     +++|+....     ...+.+|+.+++.++|        +||+++++.+.   
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~---   70 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH--------ANIVTLHDIIH---   70 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCC--------TTBCCEEEEEE---
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCC--------CCCCeeeeEEe---
Confidence            46999999999999999999763     355543221     2245579999999987        67999999876   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ....+|+||||++++|.+.+.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++|+|||+
T Consensus        71 -~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~-~~~kl~Dfg~  146 (324)
T 3mtl_A           71 -TEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINER-GELKLADFGL  146 (324)
T ss_dssp             -CSSCEEEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTT-CCEEECSSSE
T ss_pred             -eCCEEEEEecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCC-CCEEEccCcc
Confidence             778899999999999999887754 3599999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.............+||+.|+|||++.+.
T Consensus       147 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  175 (324)
T 3mtl_A          147 ARAKSIPTKTYDNEVVTLWYRPPDILLGS  175 (324)
T ss_dssp             EECC------------CGGGCCHHHHTTC
T ss_pred             cccccCCccccccccCcccccChhhhcCC
Confidence            87655544444566889999999998663

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.95  E-value=4.6e-28  Score=218.52  Aligned_cols=164  Identities=18%  Similarity=0.262  Sum_probs=132.0

Q ss_pred             ccceEEEEEecccCceeEEEecce----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ..+|++.+.||+|+||+||+|.+.    +++|+....      ...+.+|+.+++.+.+.      +++|+++++++.  
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~------~~~iv~~~~~~~--  126 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH------SDKIIRLYDYEI--  126 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT------CTTBCCEEEEEE--
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccC------CCeEEEEEEEEe--
Confidence            346999999999999999999763    355543221      24578899999999862      277999998776  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ....+|+|||+.+++|.+++....  .+++..+..++.||+.||.|||++ ||+||||||+|||+ . ++.++|+|||
T Consensus       127 --~~~~~~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll-~-~~~~kl~DFG  199 (390)
T 2zmd_A          127 --TDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLI-V-DGMLKLIDFG  199 (390)
T ss_dssp             --CSSEEEEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEE-S-SSCEEECCCS
T ss_pred             --cCCEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEE-E-CCeEEEEecC
Confidence              677899999977889998887654  589999999999999999999999 99999999999999 3 4789999999


Q ss_pred             chhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++........  .....+||+.|+|||++.+
T Consensus       200 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  230 (390)
T 2zmd_A          200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKD  230 (390)
T ss_dssp             SSCCC---------CCSCCCGGGCCHHHHHC
T ss_pred             ccccccCCCccccCCCCCcCCCccChHHhhh
Confidence            9986544322  2346689999999999975

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.95  E-value=7.7e-28  Score=214.90  Aligned_cols=192  Identities=44%  Similarity=0.668  Sum_probs=149.3

Q ss_pred             CCCCCccccccccee-ccceEEEEEecccCceeEEEecc-----eeEEEecCCC---ChhhHHHHHHHHhhhcCCCC---
Q psy16752         60 YCKGGYHPVKIGMLF-NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQF---PETALDEIKLLKCVRDGDVN---  127 (284)
Q Consensus        60 ~~~~~~~~~~~~~~~-~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~---  127 (284)
                      +.++++.|...+..+ .++|++.+.||+|+||+||+|.+     .+++|+....   ...+.+|+.+++.+.+....   
T Consensus         2 y~~~~~~p~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~   81 (373)
T 1q8y_A            2 YRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKED   81 (373)
T ss_dssp             -----CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHH
T ss_pred             CCCCCceeeecCCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchh
Confidence            456677777777766 46899999999999999999986     2355554322   34577899999999864321   


Q ss_pred             CcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       128 ~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                      ...|++|+++++.+...+.....+++|||+++++|.+.+.......+++..+..++.||+.||.|||+++||+||||||+
T Consensus        82 ~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~  161 (373)
T 1q8y_A           82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE  161 (373)
T ss_dssp             HHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred             ccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChH
Confidence            12357899999988765556678999999999999999987655569999999999999999999999548999999999


Q ss_pred             CeeEeeC-----CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        208 NVLLCVD-----EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       208 NIll~~~-----~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.+     ...++|+|||++......   .....||+.|+|||++.+.
T Consensus       162 NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~  210 (373)
T 1q8y_A          162 NVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGA  210 (373)
T ss_dssp             GEEEEEEETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTC
T ss_pred             HeEEeccCCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCC
Confidence            9999643     238999999998765432   3345799999999998764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.95  E-value=3e-28  Score=224.91  Aligned_cols=168  Identities=25%  Similarity=0.412  Sum_probs=138.9

Q ss_pred             cceeccceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +.+..++|.+.+.||+|+||.||+|.+.     +++|+..       .....+.+|+.+++.++|        +||++++
T Consensus        11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~H--------pnIv~l~   82 (476)
T 2y94_A           11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH--------PHIIKLY   82 (476)
T ss_dssp             SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCC--------TTBCCEE
T ss_pred             CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCC--------CCCCcEE
Confidence            4445567999999999999999999763     4555432       123467889999999988        6799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+.    ....+|+||||+ +++|.+++...  ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.
T Consensus        83 ~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~-~~~  154 (476)
T 2y94_A           83 QVIS----TPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDA-HMN  154 (476)
T ss_dssp             EEEE----CSSEEEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECT-TCC
T ss_pred             EEEE----ECCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEec-CCC
Confidence            9877    778899999999 77888877654  3599999999999999999999999 9999999999999954 489


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ++|+|||++...... ....+.+||+.|+|||++.+..
T Consensus       155 vkL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  191 (476)
T 2y94_A          155 AKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRL  191 (476)
T ss_dssp             EEECCCSSCEECCTT-CCBCCCCSCSTTCCHHHHTTCC
T ss_pred             eEEEeccchhhcccc-ccccccCCCcCeEChhhccCCC
Confidence            999999998765543 3345678999999999998764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.95  E-value=5.3e-28  Score=215.95  Aligned_cols=177  Identities=22%  Similarity=0.352  Sum_probs=138.1

Q ss_pred             cccccccceec--cceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccc
Q psy16752         65 YHPVKIGMLFN--NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRE  132 (284)
Q Consensus        65 ~~~~~~~~~~~--~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~  132 (284)
                      +..+..|.++.  ++|++++.||+|+||.||+|.+.     +++|.....     .+.+.+|+.+++.++|        +
T Consensus        14 ~~~~~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~   85 (364)
T 3qyz_A           14 GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH--------E   85 (364)
T ss_dssp             -CCBCC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCC--------T
T ss_pred             ceEEEccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCC--------C
Confidence            33444555553  68999999999999999999763     455554322     2456789999999988        6


Q ss_pred             hhccccccceEec-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        133 RVVQLLDDFKICG-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       133 ~i~~l~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      ||+++++.+.... .....+|+||||++++|.+.+...   .+++..+..++.||+.||.|||++ ||+||||||+|||+
T Consensus        86 niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~  161 (364)
T 3qyz_A           86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLL  161 (364)
T ss_dssp             TBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEE
T ss_pred             CCccceeEEecCCccccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEE
Confidence            6888888765221 133578999999999999888654   399999999999999999999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        212 CVDEARVKTLALNATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +. ++.++|+|||++........   .....+||+.|+|||++.+.
T Consensus       162 ~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  206 (364)
T 3qyz_A          162 NT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS  206 (364)
T ss_dssp             CT-TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTB
T ss_pred             CC-CCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCC
Confidence            54 48999999999876543322   23456899999999987544

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.95  E-value=1.2e-27  Score=207.07  Aligned_cols=172  Identities=18%  Similarity=0.255  Sum_probs=136.9

Q ss_pred             ccceeccceEEEEEecccCceeEEEecc-----eeEEEec--CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVS--PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .+.++.++|++.+.||+|+||+||+|.+     ..++|+.  ......+.+|+.+++.+.+       +++++.+++.+.
T Consensus         4 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~-------~~~i~~~~~~~~   76 (298)
T 1csn_A            4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAG-------CTGIPNVYYFGQ   76 (298)
T ss_dssp             --CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTT-------CTTCCCEEEEEE
T ss_pred             cCcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhc-------CCCCCeEEeecC
Confidence            3566778899999999999999999985     2344443  3345678899999999943       256777777655


Q ss_pred             EeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC----CcE
Q psy16752        143 ICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE----ARV  218 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~----~~v  218 (284)
                          .....|+||||++++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++    ..+
T Consensus        77 ----~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~~~~~~  150 (298)
T 1csn_A           77 ----EGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMI  150 (298)
T ss_dssp             ----ETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCE
T ss_pred             ----CCceeEEEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCCCCCCCeE
Confidence                677899999999889998887653 3599999999999999999999999 999999999999996542    239


Q ss_pred             EEEeccchhHhhhCCC-------CCCcccCCCCccchhhhhhc
Q psy16752        219 KTLALNATELAATGHK-------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~-------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|+|||++........       ......||+.|+|||++.+.
T Consensus       151 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  193 (298)
T 1csn_A          151 YVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR  193 (298)
T ss_dssp             EECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC
T ss_pred             EEEECccccccccccccccccccCccCCCCCcccCCchhhcCC
Confidence            9999999886554322       23456799999999998653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.95  E-value=2.3e-28  Score=215.12  Aligned_cols=168  Identities=13%  Similarity=0.171  Sum_probs=132.1

Q ss_pred             ceeccceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      .+..++|++.+.||+|+||+||+|.++        +++|+....     .+.+.+|+.+++.++|        +||++++
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~  116 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH--------PNIIRLE  116 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCC--------TTBCCEE
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCC--------CCCCcEE
Confidence            444578999999999999999999863        455554332     2457789999999987        6799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +++.    ....+|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.
T Consensus       117 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~-~~~  189 (325)
T 3kul_A          117 GVVT----RGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVLVDS-NLV  189 (325)
T ss_dssp             EEEC----GGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TCC
T ss_pred             EEEE----eCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEECC-CCC
Confidence            8776    677899999999 668777775443 3599999999999999999999999 9999999999999954 489


Q ss_pred             EEEEeccchhHhhhCCCCC---CcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHKLP---VSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~---~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|+|||++..........   ....+|+.|+|||++.+.
T Consensus       190 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  229 (325)
T 3kul_A          190 CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR  229 (325)
T ss_dssp             EEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHC
T ss_pred             EEECCCCcccccccCccceeeccCCCCcccccCHhHhcCC
Confidence            9999999988654432222   233567789999998653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.95  E-value=1.5e-28  Score=216.33  Aligned_cols=164  Identities=24%  Similarity=0.378  Sum_probs=117.7

Q ss_pred             cceEEE---EEecccCceeEEEecce-----eEEEecCC-CChhhHHHHHHHHhhh-cCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVT---RKLGWGHFSTVWFTGSK-----TQVLVSPQ-FPETALDEIKLLKCVR-DGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~---~~LG~G~fg~Vy~a~~~-----~~~~~~~~-~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+|++.   +.||+|+||+||+|.++     .++|+... ......+|+.+++.+. |        +||+++++++.   
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h--------~niv~~~~~~~---   76 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGH--------PNIVKLHEVFH---   76 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTC--------TTBCCEEEEEE---
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCC--------CCeeEEEEEEE---
Confidence            458775   78999999999999873     35555432 3456788999999987 5        77999999887   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC--CcEEEEe
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE--ARVKTLA  222 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~--~~v~l~D  222 (284)
                       .....|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.++  ..++|+|
T Consensus        77 -~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~D  152 (325)
T 3kn6_A           77 -DQLHTFLVMELLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDENDNLEIKIID  152 (325)
T ss_dssp             -CSSEEEEEECCCCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC----CEEEECC
T ss_pred             -cCCEEEEEEEccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCCcccEEEec
Confidence             788999999999 668888887653  599999999999999999999999 999999999999996543  2899999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++...........+.+||+.|+|||++.+.
T Consensus       153 fg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  184 (325)
T 3kn6_A          153 FGFARLKPPDNQPLKTPCFTLHYAAPELLNQN  184 (325)
T ss_dssp             CTTCEECCC----------------------C
T ss_pred             cccceecCCCCCcccccCCCcCccCHHHhcCC
Confidence            99998665554555577899999999998654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.95  E-value=5.5e-28  Score=217.65  Aligned_cols=165  Identities=18%  Similarity=0.222  Sum_probs=134.7

Q ss_pred             cceEEEEEeccc--CceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWG--HFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G--~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++.+.||+|  +||+||+|.++     +++|+....      .+.+.+|+.+++.++|        +||+++++.+.
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~   96 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH--------PNIVPYRATFI   96 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCC--------CCCCcEeEEEE
Confidence            579999999999  99999999874     355543221      2456779999999988        67999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +++|.+++.......+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++|+
T Consensus        97 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~-~~~~kl~  170 (389)
T 3gni_B           97 ----ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISV-DGKVYLS  170 (389)
T ss_dssp             ----ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TCCEEEC
T ss_pred             ----ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcC-CCCEEEc
Confidence                677899999999 67888888776545699999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCC-------CCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGH-------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~-------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||.+.......       ......+||++|+|||++.+.
T Consensus       171 dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  210 (389)
T 3gni_B          171 GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQN  210 (389)
T ss_dssp             CGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTT
T ss_pred             ccccceeeccccccccccccccccccccccccCHHHHhcc
Confidence            999876433221       223345799999999999763

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.95  E-value=3.2e-28  Score=219.29  Aligned_cols=164  Identities=23%  Similarity=0.339  Sum_probs=134.1

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++.+.||+|+||+||+|.++     .++++....    ...+.+|+.+++.+.|        +||+++++.+.    
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~~~~~~~----  118 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH--------PKLINLHDAFE----  118 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS--------TTBCCEEEEEE----
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCC--------cCCCeEEEEEE----
Confidence            46999999999999999999763     344443322    2357789999999987        67999999887    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-CCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-EARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-~~~v~l~Dfg  224 (284)
                      ....+|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ .+.++|+|||
T Consensus       119 ~~~~~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG  196 (387)
T 1kob_A          119 DKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFG  196 (387)
T ss_dssp             CSSEEEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecc
Confidence            788999999999 678887776543 3589999999999999999999999 99999999999999643 4689999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++...... ......+||+.|+|||++.+.
T Consensus       197 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  225 (387)
T 1kob_A          197 LATKLNPD-EIVKVTTATAEFAAPEIVDRE  225 (387)
T ss_dssp             TCEECCTT-SCEEEECSSGGGCCHHHHTTC
T ss_pred             cceecCCC-cceeeeccCCCccCchhccCC
Confidence            98765443 223356799999999999754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=4.3e-28  Score=212.50  Aligned_cols=170  Identities=19%  Similarity=0.278  Sum_probs=134.9

Q ss_pred             ceeccceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ..+.++|++.+.||+|+||+||+|.++     +++|+...     ..+.+.+|+.+++.++|        +||+++++.+
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~   76 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH--------KNIVKLFAIE   76 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC--------TTBCCEEEEE
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC--------CCcceEEEEe
Confidence            445678999999999999999999873     35555332     23556799999999988        6799998866


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee---CCC
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV---DEA  216 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~---~~~  216 (284)
                      .  ......+|+||||+ +++|.+.+..... ..+++..+..++.||+.||.|||++ ||+||||||+|||+..   ..+
T Consensus        77 ~--~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~  153 (319)
T 4euu_A           77 E--ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQS  153 (319)
T ss_dssp             E--CTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCE
T ss_pred             e--cCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCc
Confidence            4  22345789999999 6788888776432 2389999999999999999999999 9999999999999832   235


Q ss_pred             cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        217 RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      .++|+|||++....... ......||+.|+|||++..
T Consensus       154 ~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~  189 (319)
T 4euu_A          154 VYKLTDFGAARELEDDE-QFVSLYGTEEYLHPDMYER  189 (319)
T ss_dssp             EEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHH
T ss_pred             eEEEccCCCceecCCCC-ceeecccCCCccCHHHhhh
Confidence            79999999987655442 3335679999999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.95  E-value=1.5e-27  Score=214.39  Aligned_cols=179  Identities=26%  Similarity=0.402  Sum_probs=143.5

Q ss_pred             ccccccceeccceEEEEEecccCceeEEEecce-----eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         66 HPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        66 ~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      +++..+..+.++|++.+.||+|+||+||+|.++     +++|+....   ...+..|+.+++.+.+..  +..+.+++.+
T Consensus        44 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~--~~~~~~iv~~  121 (382)
T 2vx3_A           44 YIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHD--TEMKYYIVHL  121 (382)
T ss_dssp             BCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCS--SGGGGGBCCE
T ss_pred             EEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcc--cccceeEEEe
Confidence            456678888889999999999999999999763     455554432   244567889999887521  2233457888


Q ss_pred             cccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh--hCCCcEecCCCCCCeeEeeC-
Q psy16752        138 LDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLH--TKCRIIHTDIKPENVLLCVD-  214 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH--~~~givHrDiKp~NIll~~~-  214 (284)
                      ++.+.    ....+|+||||++++|.+.+.......+++..+..++.||+.||.|||  .. |||||||||+|||++.+ 
T Consensus       122 ~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~-~ivHrDlkp~NIll~~~~  196 (382)
T 2vx3_A          122 KRHFM----FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL-SIIHCDLKPENILLCNPK  196 (382)
T ss_dssp             EEEEE----ETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTT-CEECCCCSGGGEEESSTT
T ss_pred             eeeec----cCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCC-CEEcCCCCcccEEEecCC
Confidence            87766    667899999999999999998876556999999999999999999999  46 99999999999999643 


Q ss_pred             CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        215 EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+.++|+|||++.....   .....+||+.|+|||++.+.
T Consensus       197 ~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~  233 (382)
T 2vx3_A          197 RSAIKIVDFGSSCQLGQ---RIYQYIQSRFYRSPEVLLGM  233 (382)
T ss_dssp             SCCEEECCCTTCEETTC---CCCSSCSCGGGCCHHHHTTC
T ss_pred             CCcEEEEeccCceeccc---ccccccCCccccChHHHcCC
Confidence            57899999999876543   23456899999999998764

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=5.3e-28  Score=208.76  Aligned_cols=168  Identities=23%  Similarity=0.417  Sum_probs=131.1

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +.++|.+.+.||+|+||+||+|.++     .+++....     ..+.+.+|+.+++.++|        ++|+++++.+. 
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~-   90 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH--------PNIIKIFEVFE-   90 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCC--------TTBCCEEEEEE-
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCC--------chHHhHHHhee-
Confidence            4457999999999999999999763     24443221     23567899999999988        67999999876 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcE
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARV  218 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v  218 (284)
                         .....|+||||+ +++|.+.+...  ....+++..+..++.||+.||.|||++ ||+||||||+|||++.+  .+.+
T Consensus        91 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~NIl~~~~~~~~~~  166 (285)
T 3is5_A           91 ---DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHSPI  166 (285)
T ss_dssp             ---CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEESSSSTTCCE
T ss_pred             ---cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHHHEEEecCCCCCCE
Confidence               778899999999 66888887653  224599999999999999999999999 99999999999999543  3689


Q ss_pred             EEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|+|||++...... .......||+.|+|||++.+..
T Consensus       167 kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~  202 (285)
T 3is5_A          167 KIIDFGLAELFKSD-EHSTNAAGTALYMAPEVFKRDV  202 (285)
T ss_dssp             EECCCCCCCC-----------CTTGGGCCHHHHTTCC
T ss_pred             EEEeeecceecCCc-ccCcCcccccCcCChHHhccCC
Confidence            99999998765443 2234567999999999986543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=3.9e-28  Score=217.29  Aligned_cols=171  Identities=16%  Similarity=0.191  Sum_probs=136.6

Q ss_pred             cceeccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVV  135 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~  135 (284)
                      ..+..++|++.+.||+|+||+||+|..          .+++|.....     ...+.+|+.+++.++|        +||+
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv  137 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH--------QNIV  137 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC--------TTBC
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCC--------CCCC
Confidence            344557899999999999999999983          2355554322     2346789999999988        6799


Q ss_pred             cccccceEeccCCeEEEEEeccC-CccHHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCe
Q psy16752        136 QLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-----RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV  209 (284)
Q Consensus       136 ~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NI  209 (284)
                      ++++++.    .....|+||||+ +|+|.+++.....     ..+++..+..++.||+.||.|||++ ||+||||||+||
T Consensus       138 ~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NI  212 (367)
T 3l9p_A          138 RCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNC  212 (367)
T ss_dssp             CEEEEEC----SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGE
T ss_pred             eEEEEEe----cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhE
Confidence            9998776    677789999999 7789888876532     3489999999999999999999999 999999999999


Q ss_pred             eEeeC--CCcEEEEeccchhHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        210 LLCVD--EARVKTLALNATELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       210 ll~~~--~~~v~l~Dfg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.+  ...++|+|||++.......  .......||+.|+|||++.+.
T Consensus       213 ll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  261 (367)
T 3l9p_A          213 LLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG  261 (367)
T ss_dssp             EESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHC
T ss_pred             EEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCC
Confidence            99643  2469999999998654432  233356789999999998654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=2e-27  Score=206.29  Aligned_cols=173  Identities=21%  Similarity=0.238  Sum_probs=135.1

Q ss_pred             cccceeccceEEEEEecccCceeEEEecc---------eeEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchh
Q psy16752         69 KIGMLFNNRYRVTRKLGWGHFSTVWFTGS---------KTQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERV  134 (284)
Q Consensus        69 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i  134 (284)
                      .++.+...+|++.+.||+|+||.||+|.+         ..++|....     ..+.+.+|+.+++.++|        +||
T Consensus        14 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i   85 (302)
T 4e5w_A           14 DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH--------ENI   85 (302)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCC--------TTB
T ss_pred             ChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCC--------CCe
Confidence            33444456799999999999999999972         234444322     22567899999999987        679


Q ss_pred             ccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        135 VQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       135 ~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      +++++.+.  ......+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.
T Consensus        86 ~~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~  161 (302)
T 4e5w_A           86 VKYKGICT--EDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVES  161 (302)
T ss_dssp             CCEEEEEE--C---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEE
T ss_pred             eeeeeEEe--cCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCchheEEEcC
Confidence            99888765  12336689999999 668888876554 3599999999999999999999999 9999999999999966


Q ss_pred             CCCcEEEEeccchhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        214 DEARVKTLALNATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                      + +.++|+|||++........   ......||+.|+|||++.+.
T Consensus       162 ~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  204 (302)
T 4e5w_A          162 E-HQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQS  204 (302)
T ss_dssp             T-TEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHC
T ss_pred             C-CCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCC
Confidence            5 7999999999876654432   23356788899999988654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.95  E-value=3.8e-28  Score=214.71  Aligned_cols=165  Identities=25%  Similarity=0.387  Sum_probs=135.2

Q ss_pred             eccceEEEEEecccCceeEEEecc-----eeEEEecCC------------CChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ------------FPETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~------------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      +.++|++.+.||+|+||+||+|.+     .+++|+...            ....+.+|+.+++.++|        +||++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~Iv~   93 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH--------ANIIK   93 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCC--------TTBCC
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCC--------CCEee
Confidence            345799999999999999999975     234444322            23467789999999987        67999


Q ss_pred             ccccceEeccCCeEEEEEeccC-Cc-cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GH-NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      +++++.    ....+++||||+ .| +|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. 
T Consensus        94 ~~~~~~----~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~-  165 (335)
T 3dls_A           94 VLDIFE----NQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAE-  165 (335)
T ss_dssp             EEEEEE----CSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-
T ss_pred             EEEEEe----eCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcC-
Confidence            999887    788999999988 44 7777776543  599999999999999999999999 9999999999999955 


Q ss_pred             CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        215 EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ++.++|+|||++...... ....+.+||+.|+|||++.+.-
T Consensus       166 ~~~~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  205 (335)
T 3dls_A          166 DFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEVLMGNP  205 (335)
T ss_dssp             TSCEEECCCTTCEECCTT-CCBCEECSCGGGCCHHHHTTCC
T ss_pred             CCcEEEeecccceECCCC-CceeccCCCccccChhhhcCCC
Confidence            489999999998765543 3344678999999999997654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=7e-28  Score=206.74  Aligned_cols=166  Identities=20%  Similarity=0.345  Sum_probs=135.7

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEec----CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +.++|++.+.||+|+||+||+|.++     .+++..    ....+.+.+|+.+++.+.|        +||+++++.+.  
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~--   76 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH--------PNIIRLYETFE--   76 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCC--------TTBCCEEEEEE--
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCC--------CCEeeEEEEEe--
Confidence            3457999999999999999999762     244432    2234567889999999987        67999999876  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe--eCCCcEEEE
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC--VDEARVKTL  221 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~--~~~~~v~l~  221 (284)
                        .....|+||||+ +++|.+.+....  .+++..+..++.|++.||.|||++ ||+||||||+|||+.  ...+.++|+
T Consensus        77 --~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~  151 (277)
T 3f3z_A           77 --DNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLI  151 (277)
T ss_dssp             --CSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred             --cCCeEEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEE
Confidence              788899999999 668888877654  489999999999999999999999 999999999999993  234789999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||++...... .......||+.|+|||++.+..
T Consensus       152 Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~  184 (277)
T 3f3z_A          152 DFGLAARFKPG-KMMRTKVGTPYYVSPQVLEGLY  184 (277)
T ss_dssp             CCTTCEECCTT-SCBCCCCSCTTTCCHHHHTTCB
T ss_pred             ecccceeccCc-cchhccCCCCCccChHHhcccC
Confidence            99998765543 2334567999999999987653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.95  E-value=9.2e-28  Score=209.35  Aligned_cols=163  Identities=26%  Similarity=0.392  Sum_probs=126.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++++.||+|+||+||+|.+.     .++|.....      .+.+.+|+.+++.++|        +||+++++.+.  
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~--   72 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH--------PNLVNLLEVFR--   72 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE--
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCC--------CCccchhheee--
Confidence            57999999999999999999863     345543222      2346789999999988        67999999876  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        .....++||||+.++++..+.... ..+++..+..++.|++.||.|||++ ||+||||||+||+++. ++.++|+|||
T Consensus        73 --~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~-~~~~kl~Dfg  147 (311)
T 4agu_A           73 --RKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITK-HSVIKLCDFG  147 (311)
T ss_dssp             --ETTEEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TSCEEECCCT
T ss_pred             --cCCeEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcC-CCCEEEeeCC
Confidence              677899999999777766665543 3599999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++..............||+.|+|||++.+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (311)
T 4agu_A          148 FARLLTGPSDYYDDEVATRWYRSPELLVG  176 (311)
T ss_dssp             TCEECC------------GGGCCHHHHHT
T ss_pred             CchhccCcccccCCCcCCccccChHHHhc
Confidence            98766544444456689999999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=5.8e-28  Score=214.29  Aligned_cols=164  Identities=26%  Similarity=0.372  Sum_probs=134.1

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ++|++.+.||+|+||.||+|.++     +++|....         ....+.+|+.+++.+.|        +||+++++.+
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~   81 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH--------PNIIGLLDAF   81 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC--------TTBCCEEEEE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCC--------CCCCeEEEEE
Confidence            46999999999999999999773     35554321         13467899999999988        6799999877


Q ss_pred             eEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        142 KICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      .    ....+++||||+.+++...+.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+
T Consensus        82 ~----~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~-~~~~kl~  154 (346)
T 1ua2_A           82 G----HKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDE-NGVLKLA  154 (346)
T ss_dssp             C----CTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECT-TCCEEEC
T ss_pred             e----eCCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcC-CCCEEEE
Confidence            6    677899999999888888876543 3589999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.............+||+.|+|||++.+.
T Consensus       155 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  187 (346)
T 1ua2_A          155 DFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA  187 (346)
T ss_dssp             CCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred             ecccceeccCCcccCCcccccccccCchHhhCC
Confidence            999998776555555567899999999999653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.2e-27  Score=212.72  Aligned_cols=177  Identities=10%  Similarity=0.134  Sum_probs=135.8

Q ss_pred             cccccee----ccceEEEEEecccCceeEEEecce-------------eEEEecCCCChhhHHHHHHHHhhhcCCCCCcc
Q psy16752         68 VKIGMLF----NNRYRVTRKLGWGHFSTVWFTGSK-------------TQVLVSPQFPETALDEIKLLKCVRDGDVNDPY  130 (284)
Q Consensus        68 ~~~~~~~----~~~y~i~~~LG~G~fg~Vy~a~~~-------------~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~  130 (284)
                      +..|+++    .++|++.+.||+|+||+||+|.+.             .++|+... ...+.+|+.+++.+.|       
T Consensus        30 l~~g~~i~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~-~~~~~~E~~~l~~l~h-------  101 (352)
T 2jii_A           30 LPTGTVLTDKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAK-DGRLFNEQNFFQRAAK-------  101 (352)
T ss_dssp             CCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEET-TSTHHHHHHHHHHHCC-------
T ss_pred             CCCCceeecccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecc-cchHHHHHHHHHHhcc-------
Confidence            3445555    368999999999999999999753             24444432 3578999999999988       


Q ss_pred             cchhccccccc------------eEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q psy16752        131 RERVVQLLDDF------------KICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR  198 (284)
Q Consensus       131 ~~~i~~l~~~~------------~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g  198 (284)
                       +|+++++..+            .........+|+||||++++|.+++.......+++..+..++.||+.||.|||++ |
T Consensus       102 -~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~  179 (352)
T 2jii_A          102 -PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN-E  179 (352)
T ss_dssp             -HHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             -cchhhhhhhhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Confidence             5566533221            1111246789999999988999998875334699999999999999999999999 9


Q ss_pred             cEecCCCCCCeeEeeCC-CcEEEEeccchhHhhhCCC-------CCCcccCCCCccchhhhhhc
Q psy16752        199 IIHTDIKPENVLLCVDE-ARVKTLALNATELAATGHK-------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       199 ivHrDiKp~NIll~~~~-~~v~l~Dfg~a~~~~~~~~-------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+||||||+|||++.++ ..++|+|||++........       ......||+.|+|||++.+.
T Consensus       180 ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  243 (352)
T 2jii_A          180 YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGC  243 (352)
T ss_dssp             CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTC
T ss_pred             ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccC
Confidence            99999999999996552 2899999999876543321       12345899999999988663

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.95  E-value=1.4e-27  Score=211.90  Aligned_cols=168  Identities=24%  Similarity=0.376  Sum_probs=133.6

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|+||+||+|.++     +++|....      ....+.+|+.+++.++|        +||+++++.+...
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~~~   88 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH--------ENVVNLIEICRTK   88 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCC--------TTBCCEEEEEEEC
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccC--------CCcccHhheeecc
Confidence            47999999999999999999862     35554321      23467899999999988        6689888877632


Q ss_pred             c----cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        145 G----VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       145 ~----~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    .....+|+||||+++++.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|
T Consensus        89 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~-~~~kl  165 (351)
T 3mi9_A           89 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRD-GVLKL  165 (351)
T ss_dssp             --------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT-SCEEE
T ss_pred             ccccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCC-CCEEE
Confidence            1    1256799999999999998887654 3599999999999999999999999 99999999999999544 89999


Q ss_pred             EeccchhHhhhCC----CCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGH----KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~----~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++.......    .......||+.|+|||++.+.
T Consensus       166 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  203 (351)
T 3mi9_A          166 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE  203 (351)
T ss_dssp             CCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC
T ss_pred             ccchhcccccccccccccccCCcccccCccCchhhcCC
Confidence            9999987654221    222356789999999998653

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.95  E-value=8.8e-28  Score=213.56  Aligned_cols=166  Identities=24%  Similarity=0.368  Sum_probs=122.0

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+.++|++.+.||+|+||+||+|.++     +++|+...  ..+.+.+|+.+++.+.|        +||+++++.+.   
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~---  118 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSH--------PNIIKLKEIFE---  118 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCC--------TTBCCEEEEEE---
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCC--------CCCcceeeeEe---
Confidence            34567999999999999999999873     35554322  34567789999999988        67999999877   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee--CCCcEEEEe
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV--DEARVKTLA  222 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~--~~~~v~l~D  222 (284)
                       ....+++||||+ +++|.+.+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++.  +++.++|+|
T Consensus       119 -~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~D  194 (349)
T 2w4o_A          119 -TPTEISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIAD  194 (349)
T ss_dssp             -CSSEEEEEECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred             -cCCeEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEcc
Confidence             778899999999 678888876543  589999999999999999999999 9999999999999964  257999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++...... ......+||+.|+|||++.+.
T Consensus       195 fg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  225 (349)
T 2w4o_A          195 FGLSKIVEHQ-VLMKTVCGTPGYCAPEILRGC  225 (349)
T ss_dssp             CC-----------------CGGGSCHHHHTTC
T ss_pred             CccccccCcc-cccccccCCCCccCHHHhcCC
Confidence            9998765443 233456899999999998764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.95  E-value=1.8e-27  Score=204.77  Aligned_cols=166  Identities=24%  Similarity=0.338  Sum_probs=134.8

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+.++|++.+.||+|+||.||+|.++     .++|+....      .+.+.+|+.+++.++|        +||+++++.+
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~   74 (284)
T 3kk8_A            3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH--------PNIVRLHDSI   74 (284)
T ss_dssp             TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEE
T ss_pred             hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCC--------CCcCeEEEEE
Confidence            34568999999999999999999762     344443221      2456789999999987        6799999887


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC--CcE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE--ARV  218 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~--~~v  218 (284)
                      .    .....|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+||+++.++  ..+
T Consensus        75 ~----~~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~  147 (284)
T 3kk8_A           75 Q----EESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAV  147 (284)
T ss_dssp             E----CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCE
T ss_pred             E----cCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcE
Confidence            6    778899999999 668888887664  489999999999999999999999 999999999999996542  359


Q ss_pred             EEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        219 KTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|+|||.+...... .......||+.|+|||++.+.
T Consensus       148 kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  182 (284)
T 3kk8_A          148 KLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLKKD  182 (284)
T ss_dssp             EECCCTTCEECCSS-CBCCCSCSCGGGCCHHHHTTC
T ss_pred             EEeeceeeEEcccC-ccccCCCCCcCCcCchhhcCC
Confidence            99999998755443 223456799999999998664

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.95  E-value=1.3e-27  Score=214.15  Aligned_cols=175  Identities=23%  Similarity=0.343  Sum_probs=127.6

Q ss_pred             cccccccc---eeccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcc
Q psy16752         65 YHPVKIGM---LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPY  130 (284)
Q Consensus        65 ~~~~~~~~---~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~  130 (284)
                      ++++.+|.   .+.++|++.+.||+|+||+||+|.+.     +++|+....      ...+.+|+.+++.+.|       
T Consensus        11 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-------   83 (371)
T 2xrw_A           11 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-------   83 (371)
T ss_dssp             EEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCC-------
T ss_pred             ceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCC-------
Confidence            44455554   34568999999999999999999752     355543221      2456789999999988       


Q ss_pred             cchhccccccceEec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCC
Q psy16752        131 RERVVQLLDDFKICG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPEN  208 (284)
Q Consensus       131 ~~~i~~l~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~N  208 (284)
                       +||+++++.+....  .....+|+||||+++++.+.+..    .+++..+..++.||+.||.|||++ ||+||||||+|
T Consensus        84 -pniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~N  157 (371)
T 2xrw_A           84 -KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSN  157 (371)
T ss_dssp             -TTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGG
T ss_pred             -CCccceEEeeccccccccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHH
Confidence             66898888765211  12348999999999999888752    389999999999999999999999 99999999999


Q ss_pred             eeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        209 VLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       209 Ill~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++. ++.++|+|||++...... ......+||+.|+|||++.+.
T Consensus       158 Il~~~-~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  201 (371)
T 2xrw_A          158 IVVKS-DCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  201 (371)
T ss_dssp             EEECT-TSCEEECCCCC-----------------CTTCCHHHHTTC
T ss_pred             EEEcC-CCCEEEEEeecccccccc-cccCCceecCCccCHHHhcCC
Confidence            99954 489999999998766543 223356899999999998754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.7e-27  Score=214.04  Aligned_cols=169  Identities=18%  Similarity=0.241  Sum_probs=135.6

Q ss_pred             ceeccceEEEEEecccCceeEEEecc------------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccch
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGS------------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRER  133 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~------------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~  133 (284)
                      .+..++|++.+.||+|+||+||+|.+            ..++|+....     ...+.+|+.+++.+ +|        +|
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------pn  136 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--------KN  136 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--------TT
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCC--------ch
Confidence            44456899999999999999999974            2455554332     24577899999999 66        77


Q ss_pred             hccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCC
Q psy16752        134 VVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------------RGIPLENVRSIIRQILQGLNYLHTKCR  198 (284)
Q Consensus       134 i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~g  198 (284)
                      |+++++++.    ....+|+||||+ +++|.+++.....              ..+++..+..++.||+.||.|||++ |
T Consensus       137 Iv~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~  211 (382)
T 3tt0_A          137 IINLLGACT----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K  211 (382)
T ss_dssp             BCCEEEEEC----SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             hhhheeeec----cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-C
Confidence            999999776    677899999999 6688888876531              3489999999999999999999999 9


Q ss_pred             cEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        199 IIHTDIKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       199 ivHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+||||||+|||++. ++.++|+|||++........  ......+|+.|+|||++.+.
T Consensus       212 ivH~Dlkp~NIll~~-~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  268 (382)
T 3tt0_A          212 CIHRDLAARNVLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR  268 (382)
T ss_dssp             CCCSCCCGGGEEECT-TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSC
T ss_pred             EecCCCCcceEEEcC-CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCC
Confidence            999999999999954 48999999999876544322  22345678899999998654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.95  E-value=3.8e-28  Score=213.12  Aligned_cols=170  Identities=15%  Similarity=0.206  Sum_probs=129.0

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|++.+.||+|+||+||+|.++     +++|+...     ..+.+.+|+.+++.++|        +||+++++.+...
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~~~   76 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH--------PGIVRYFNAWLET   76 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCC--------TTBCCEEEEEEEC
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCC--------CCEeeEEEEEEEe
Confidence            357999999999999999999873     35555321     23567899999999988        6688888776421


Q ss_pred             c-----------------------------------------------------cCCeEEEEEeccC-CccHHHHHHhhC
Q psy16752        145 G-----------------------------------------------------VNGTHVCMVFEVL-GHNLLKLIVKSK  170 (284)
Q Consensus       145 ~-----------------------------------------------------~~~~~~~iv~e~~-~~~l~~~~~~~~  170 (284)
                      .                                                     ....++++||||+ +++|.+.+....
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  156 (332)
T 3qd2_B           77 PPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC  156 (332)
T ss_dssp             CSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC
T ss_pred             ccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc
Confidence            1                                                     1233589999999 668887776643


Q ss_pred             C-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCC------------CCCC
Q psy16752        171 Y-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGH------------KLPV  237 (284)
Q Consensus       171 ~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~------------~~~~  237 (284)
                      . ...++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||++.......            ....
T Consensus       157 ~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~  234 (332)
T 3qd2_B          157 SLEDREHGVCLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTM-DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHT  234 (332)
T ss_dssp             SGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECT-TCCEEECCCTTCEECSCC--------------CCC
T ss_pred             CccchhhHHHHHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeC-CCCEEEeecCcccccccchhhcccccccccccccc
Confidence            2 2256677899999999999999999 9999999999999954 4899999999987655432            2233


Q ss_pred             cccCCCCccchhhhhhc
Q psy16752        238 SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       238 ~~~gt~~~~aPE~l~~~  254 (284)
                      ..+||+.|+|||++.+.
T Consensus       235 ~~~gt~~y~aPE~~~~~  251 (332)
T 3qd2_B          235 GQVGTKLYMSPEQIHGN  251 (332)
T ss_dssp             SCC-CGGGSCHHHHHCC
T ss_pred             ccCCCcCccChHHhcCC
Confidence            56799999999998764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=1.2e-27  Score=211.33  Aligned_cols=169  Identities=18%  Similarity=0.226  Sum_probs=134.5

Q ss_pred             ceeccceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      .+..++|++.+.||+|+||.||+|.+.          +++|+....     ...+.+|+.+++.++|        +||++
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~  114 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN--------PNIVK  114 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC--------TTBCC
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCC--------CCEEE
Confidence            444578999999999999999999864          345544332     2456789999999987        67999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhC----------------------CCCCCHHHHHHHHHHHHHHHHHH
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK----------------------YRGIPLENVRSIIRQILQGLNYL  193 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------------~~~~~~~~~~~i~~qi~~aL~~L  193 (284)
                      +++++.    ....+|+||||+ +++|.+++....                      ...+++..+..++.||+.||.||
T Consensus       115 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L  190 (343)
T 1luf_A          115 LLGVCA----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  190 (343)
T ss_dssp             EEEEEC----SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEc----cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            998776    677899999999 668888887642                      13589999999999999999999


Q ss_pred             hhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        194 HTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       194 H~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++ ||+||||||+|||++.+ +.++|+|||++.......  .......+|+.|+|||++.+.
T Consensus       191 H~~-~ivH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  251 (343)
T 1luf_A          191 SER-KFVHRDLATRNCLVGEN-MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN  251 (343)
T ss_dssp             HHT-TCCCSCCSGGGEEECGG-GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC
T ss_pred             HhC-CeecCCCCcceEEECCC-CeEEEeecCCCcccccCccccccCCCcccceecChhhhccC
Confidence            999 99999999999999544 799999999998764432  223356789999999988643

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.8e-27  Score=210.53  Aligned_cols=166  Identities=18%  Similarity=0.242  Sum_probs=133.4

Q ss_pred             ccceEEEEEecccCceeEEEecc----------eeEEEecC-----CCChhhHHHHHHHHhh-hcCCCCCcccchhcccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSP-----QFPETALDEIKLLKCV-RDGDVNDPYRERVVQLL  138 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~-----~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~  138 (284)
                      .++|.+.+.||+|+||+||+|.+          ..++|+..     ...+.+.+|+.+++.+ .|        +||++++
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------p~iv~~~  115 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH--------ENIVNLL  115 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC--------TTBCCEE
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCC--------CCeeeEE
Confidence            35799999999999999999985          23555432     2346688999999999 67        7799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCC---------------------CCCCHHHHHHHHHHHHHHHHHHhhC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY---------------------RGIPLENVRSIIRQILQGLNYLHTK  196 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---------------------~~~~~~~~~~i~~qi~~aL~~LH~~  196 (284)
                      +.+.    ....+|+||||+ +++|.+++.....                     ..+++..+..++.||+.||.|||++
T Consensus       116 ~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  191 (344)
T 1rjb_A          116 GACT----LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK  191 (344)
T ss_dssp             EEEC----SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEe----eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8776    677899999999 6788888876432                     2378999999999999999999999


Q ss_pred             CCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        197 CRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       197 ~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                       ||+||||||+|||++. ++.++|+|||++.........  .....||+.|+|||++.+.
T Consensus       192 -~ivH~Dikp~NIll~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  249 (344)
T 1rjb_A          192 -SCVHRDLAARNVLVTH-GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG  249 (344)
T ss_dssp             -TEEETTCSGGGEEEET-TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred             -CcccCCCChhhEEEcC-CCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccC
Confidence             9999999999999954 489999999999866544322  2355678899999988653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=1e-27  Score=205.01  Aligned_cols=164  Identities=16%  Similarity=0.243  Sum_probs=132.0

Q ss_pred             cceEEEEEecccCceeEEEecc----eeEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----KTQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++|++.+.||+|+||+||+|.+    ..++|....   ..+.+.+|+.+++.++|        +||+++++.+.    ..
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~----~~   77 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH--------PKLVQLYGVCL----EQ   77 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC--------TTBCCEEEEEC----SS
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCC--------CCEeeEEEEEe----cC
Confidence            4799999999999999999976    235554332   24567899999999987        67999998776    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||++ ||+||||||+||+++.+ +.++|+|||++.
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~-~~~kl~Dfg~~~  154 (269)
T 4hcu_A           78 APICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGEN-QVIKVSDFGMTR  154 (269)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGG-GCEEECCTTGGG
T ss_pred             CceEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCC-CCEEeccccccc
Confidence            7899999999 567777775543 4589999999999999999999999 99999999999999554 899999999987


Q ss_pred             HhhhCC-CCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGH-KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~-~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...... .......+|+.|+|||++.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (269)
T 4hcu_A          155 FVLDDQYTSSTGTKFPVKWASPEVFSFS  182 (269)
T ss_dssp             GBCCHHHHSTTSTTCCGGGCCHHHHHHC
T ss_pred             cccccccccccCcccccccCCHHHhcCC
Confidence            543221 122345678899999998643

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=1.2e-27  Score=206.87  Aligned_cols=168  Identities=19%  Similarity=0.246  Sum_probs=123.6

Q ss_pred             cccceeccceEEEEEecccCceeEEEeccee--EEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         69 KIGMLFNNRYRVTRKLGWGHFSTVWFTGSKT--QVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        69 ~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~~--~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ..+++..++|++.+.||+|+||+||+|.+..  ++++....      .+.+.+|+.+++.++|        +||+.++++
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~   88 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH--------VNILLFMGY   88 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCC--------TTBCCEEEE
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCC--------CcEEEEEee
Confidence            3456777899999999999999999998743  44443222      2457789999999988        668888774


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      .     ....+++||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++
T Consensus        89 ~-----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~-~~~k  160 (289)
T 3og7_A           89 S-----TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHED-NTVK  160 (289)
T ss_dssp             E-----CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETT-TEEE
T ss_pred             c-----cCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCC-CCEE
Confidence            3     455689999999 567777765443 4599999999999999999999999 99999999999999654 8999


Q ss_pred             EEeccchhHhhhC--CCCCCcccCCCCccchhhhh
Q psy16752        220 TLALNATELAATG--HKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       220 l~Dfg~a~~~~~~--~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |+|||++......  ........||+.|+|||++.
T Consensus       161 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (289)
T 3og7_A          161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR  195 (289)
T ss_dssp             ECCCC------------------CCCTTCCHHHHC
T ss_pred             EccceeccccccccccccccccCCCccccCchhhc
Confidence            9999998755432  12233567999999999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.95  E-value=1.4e-27  Score=212.16  Aligned_cols=158  Identities=22%  Similarity=0.315  Sum_probs=132.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .+|++++.||+|+||+||+|.+.     +++|.....       .+.+.+|+.+++.++|        +||+++++.+. 
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~-  124 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH--------PNTIQYRGCYL-  124 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE-
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEE-
Confidence            46999999999999999999752     344443221       1457789999999988        67999998776 


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                         .....|+||||+.|++.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+||
T Consensus       125 ---~~~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~-~~~~kL~Df  198 (348)
T 1u5q_A          125 ---REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSE-PGLVKLGDF  198 (348)
T ss_dssp             ---ETTEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEET-TTEEEECCC
T ss_pred             ---ECCeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECC-CCCEEEeec
Confidence               677899999999999988886554 3599999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |++.....    ....+||+.|+|||++.
T Consensus       199 G~a~~~~~----~~~~~gt~~y~aPE~~~  223 (348)
T 1u5q_A          199 GSASIMAP----ANSFVGTPYWMAPEVIL  223 (348)
T ss_dssp             TTCBSSSS----BCCCCSCGGGCCHHHHH
T ss_pred             cCceecCC----CCcccCCcceeCHhhhc
Confidence            99875543    23568999999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.95  E-value=5.4e-27  Score=202.63  Aligned_cols=166  Identities=22%  Similarity=0.306  Sum_probs=134.8

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .|++.+.||+|+||+||+|.+.     .+++....      ..+.+.+|+.+++.++|        +||+++++.+....
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH--------PNIVRFYDSWESTV   98 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEEEES
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCC--------CCeeeeeeeecccc
Confidence            5899999999999999999762     23333221      12446789999999987        67999998877555


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIll~~~~~~v~l~D  222 (284)
                      .....+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+. +  |+||||||+|||++.+.+.++|+|
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~D  175 (290)
T 1t4h_A           99 KGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGD  175 (290)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred             CCCceEEEEEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEee
Confidence            5678899999999 668888887654  489999999999999999999999 8  999999999999965668999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||++.....  .......||+.|+|||++.+..
T Consensus       176 fg~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~  206 (290)
T 1t4h_A          176 LGLATLKRA--SFAKAVIGTPEFMAPEMYEEKY  206 (290)
T ss_dssp             TTGGGGCCT--TSBEESCSSCCCCCGGGGGTCC
T ss_pred             CCCcccccc--cccccccCCcCcCCHHHHhccC
Confidence            999864433  2334567999999999987653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.95  E-value=2.9e-27  Score=208.18  Aligned_cols=164  Identities=21%  Similarity=0.258  Sum_probs=129.6

Q ss_pred             ccceEEEEEecccCceeEEEecce---------eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .++|++.+.||+|+||+||+|.+.         .+++...     .....+.+|+.+++.++|        +||++++++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~   85 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN--------PHVCRLLGI   85 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCB--------TTBCCEEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC--------CCEeEEEEE
Confidence            467999999999999999999752         1333321     233567889999999988        679999987


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.    .. ..++|++|+ +|+|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++
T Consensus        86 ~~----~~-~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~-~~~k  157 (327)
T 3poz_A           86 CL----TS-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTP-QHVK  157 (327)
T ss_dssp             EE----SS-SEEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEET-TEEE
T ss_pred             Ee----cC-CeEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCC-CCEE
Confidence            75    33 367888888 788888887654 3599999999999999999999999 99999999999999665 7999


Q ss_pred             EEeccchhHhhhCCCCC--CcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKLP--VSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~--~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++..........  ....+|+.|+|||++.+.
T Consensus       158 l~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  194 (327)
T 3poz_A          158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR  194 (327)
T ss_dssp             ECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHC
T ss_pred             EccCcceeEccCCcccccccCCCccccccChHHhccC
Confidence            99999998776543322  244568899999998654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.95  E-value=1.2e-27  Score=205.94  Aligned_cols=165  Identities=19%  Similarity=0.204  Sum_probs=120.6

Q ss_pred             eccceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ..++|++.+.||+|+||.||+|.+.        .+++.....     .+.+.+|+.+++.+.|        +||+++++.
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~   84 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH--------PHIVKLIGV   84 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC--------TTBCCEEEE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCC--------CccceEEEE
Confidence            3468999999999999999999762        344443321     2456789999999987        679999886


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +     .....|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++
T Consensus        85 ~-----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~-~~~k  156 (281)
T 1mp8_A           85 I-----TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSN-DCVK  156 (281)
T ss_dssp             E-----CSSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEET-TEEE
T ss_pred             E-----ccCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCC-CCEE
Confidence            5     345689999999 568877776543 3589999999999999999999999 99999999999999665 8999


Q ss_pred             EEeccchhHhhhCCCC-CCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKL-PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~-~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++......... .....+|+.|+|||++.+.
T Consensus       157 l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (281)
T 1mp8_A          157 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR  192 (281)
T ss_dssp             ECC-------------------CCGGGCCHHHHHHC
T ss_pred             ECccccccccCcccccccccCCCcccccChhhcccC
Confidence            9999998876543322 2244577889999998643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=7.9e-28  Score=208.35  Aligned_cols=170  Identities=21%  Similarity=0.236  Sum_probs=129.6

Q ss_pred             ceeccceEEEEEecccCceeEEEecc---------eeEEEecCCCC----hhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGS---------KTQVLVSPQFP----ETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      .+..++|++++.||+|+||+||+|..         ..++|......    +.+.+|+.+++.++|        +||++++
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~   77 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH--------DNIVKYK   77 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCC--------TTBCCEE
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCC--------CCEeeEE
Confidence            44557899999999999999999972         23555443332    456789999999988        6689888


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+..  .....+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.
T Consensus        78 ~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~-~~  152 (295)
T 3ugc_A           78 GVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENE-NR  152 (295)
T ss_dssp             EEECH--HHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEET-TE
T ss_pred             EEEec--CCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhEEEcCC-Ce
Confidence            86531  1334589999999 678888887654 3489999999999999999999999 99999999999999665 89


Q ss_pred             EEEEeccchhHhhhCCCC---CCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHKL---PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~---~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|+|||++.........   .....+++.|+|||++.+.
T Consensus       153 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (295)
T 3ugc_A          153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES  192 (295)
T ss_dssp             EEECCCCSCC-------------CTTCGGGGCCHHHHHHC
T ss_pred             EEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCC
Confidence            999999999876543321   2234577789999998654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.95  E-value=1.5e-27  Score=213.97  Aligned_cols=164  Identities=21%  Similarity=0.309  Sum_probs=127.7

Q ss_pred             cceEE--EEEecccCceeEEEecc-----eeEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRV--TRKLGWGHFSTVWFTGS-----KTQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i--~~~LG~G~fg~Vy~a~~-----~~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ..|.+  .+.||+|+||.||+|.+     ..++|+...    ..+.+.+|+.+++.++|        +||+++++.+.  
T Consensus        87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~~~~~~~--  156 (373)
T 2x4f_A           87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH--------ANLIQLYDAFE--  156 (373)
T ss_dssp             GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEE--
T ss_pred             cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCC--------CCCCeEEEEEE--
Confidence            34655  67899999999999976     235554433    23567889999999987        77999999877  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-CCcEEEEe
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-EARVKTLA  222 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-~~~v~l~D  222 (284)
                        ....+|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||+. ||+||||||+|||+..+ .+.++|+|
T Consensus       157 --~~~~~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~D  232 (373)
T 2x4f_A          157 --SKNDIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIID  232 (373)
T ss_dssp             --CSSEEEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECC
T ss_pred             --ECCEEEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEe
Confidence              778899999999 678888876543 3489999999999999999999999 99999999999999643 56899999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++....... .....+||+.|+|||++.+.
T Consensus       233 FG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~  263 (373)
T 2x4f_A          233 FGLARRYKPRE-KLKVNFGTPEFLAPEVVNYD  263 (373)
T ss_dssp             CSSCEECCTTC-BCCCCCSSCTTCCHHHHTTC
T ss_pred             CCCceecCCcc-ccccccCCCcEeChhhccCC
Confidence            99988665442 23355799999999998654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=1.2e-27  Score=210.26  Aligned_cols=169  Identities=18%  Similarity=0.181  Sum_probs=133.4

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      ++|++.+.||+|+||+||+|.+.   +++|+....   ......|+.+++.++|        +||+++++++........
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKH--------ENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC--------TTBCCEEEEEEEECSSSE
T ss_pred             hhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCC--------CCchhhcceeccCCCCCc
Confidence            47999999999999999999763   355544322   1234557777888877        779999998875444467


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC---------CcEecCCCCCCeeEeeCCCcEE
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC---------RIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---------givHrDiKp~NIll~~~~~~v~  219 (284)
                      .+|+||||+ +|+|.+++...   .+++..+..++.||+.||.|||+.+         ||+||||||+|||++. .+.++
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~-~~~~k  171 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN-NLTAC  171 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECT-TCCEE
T ss_pred             eEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECC-CCeEE
Confidence            799999999 66888888654   3999999999999999999999752         7999999999999954 48999


Q ss_pred             EEeccchhHhhhCCC--CCCcccCCCCccchhhhhhccc
Q psy16752        220 TLALNATELAATGHK--LPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      |+|||++........  .....+||+.|+|||++.+...
T Consensus       172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  210 (322)
T 3soc_A          172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAIN  210 (322)
T ss_dssp             ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCC
T ss_pred             EccCCcccccccccCccccccCccCccccCHhhcccccc
Confidence            999999976554332  2334689999999999986433

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.95  E-value=1.3e-27  Score=209.70  Aligned_cols=166  Identities=27%  Similarity=0.408  Sum_probs=135.3

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEecCC----------CChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----------FPETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      .+.++|++.+.||+|+||.||+|.++     .++|+...          ..+.+.+|+.+++.+.|        ++|+++
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~   80 (321)
T 2a2a_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH--------HNVITL   80 (321)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCC--------TTBCCE
T ss_pred             hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCC--------CCcceE
Confidence            34567999999999999999999763     34444322          13457899999999988        669999


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~  216 (284)
                      ++.+.    ....+|+||||+ +++|.+.+...  ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++.
T Consensus        81 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~  153 (321)
T 2a2a_A           81 HDVYE----NRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNI  153 (321)
T ss_dssp             EEEEE----CSSEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTS
T ss_pred             EEEEe----cCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCC
Confidence            98876    778899999999 67888887654  3589999999999999999999999 9999999999999966532


Q ss_pred             ---cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 ---RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ---~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                         .++|+|||++....... ......||+.|+|||++.+.
T Consensus       154 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~  193 (321)
T 2a2a_A          154 PIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEIVNYE  193 (321)
T ss_dssp             SSCCEEECCCTTCEECCTTC-CCCCCCSCGGGCCHHHHTTC
T ss_pred             CcCCEEEccCccceecCccc-cccccCCCCCccCcccccCC
Confidence               79999999987655432 23456799999999998654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=1.5e-27  Score=205.73  Aligned_cols=167  Identities=20%  Similarity=0.209  Sum_probs=136.5

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ...+|++.+.||+|+||+||+|.++     .+++.....   .+.+.+|+.+++.++|        ++|+++++.+.   
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~---   79 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH--------PNLVQLLGVCT---   79 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCC--------TTBCCEEEEEC---
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEc---
Confidence            3467999999999999999999874     355544332   3557899999999988        66999988776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +++|.+.+.......+++..+..++.||+.||.|||++ ||+||||||+||+++.+ +.++|+|||
T Consensus        80 -~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~-~~~~l~Dfg  156 (288)
T 3kfa_A           80 -REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGEN-HLVKVADFG  156 (288)
T ss_dssp             -SSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGG-GCEEECCCC
T ss_pred             -cCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCC-CCEEEccCc
Confidence             677899999999 57888888775555699999999999999999999999 99999999999999544 799999999


Q ss_pred             chhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++........ ......+|+.|+|||++.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  187 (288)
T 3kfa_A          157 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYN  187 (288)
T ss_dssp             GGGTSCSSSSEEETTEEECGGGCCHHHHHHC
T ss_pred             cceeccCCccccccCCccccCcCChhhhccC
Confidence            9886654332 22345678899999998644

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.95  E-value=2.9e-27  Score=204.72  Aligned_cols=165  Identities=25%  Similarity=0.347  Sum_probs=134.9

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ..++|.+.+.||+|+||.||+|.+.     .++++...       ..+.+.+|+.+++.+.|        +||+++++.+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~   84 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH--------QHVVGFHGFF   84 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC--------TTBCCEEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCC--------CCEeeeeeee
Confidence            3457999999999999999999863     24444321       13456789999999987        6799999887


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    .....++||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.++|
T Consensus        85 ~----~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~-~~~~kl  156 (294)
T 2rku_A           85 E----DNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNE-DLEVKI  156 (294)
T ss_dssp             E----CSSEEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECT-TCCEEE
T ss_pred             c----cCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcC-CCCEEE
Confidence            6    778899999999 567777766543  599999999999999999999999 9999999999999954 489999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++..............||+.|+|||++.+.
T Consensus       157 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  190 (294)
T 2rku_A          157 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK  190 (294)
T ss_dssp             CCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTS
T ss_pred             EeccCceecccCccccccccCCCCcCCcchhccC
Confidence            9999987665444444567899999999998654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.3e-27  Score=215.93  Aligned_cols=174  Identities=19%  Similarity=0.269  Sum_probs=136.4

Q ss_pred             cceeccceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      +..+.++|++.+.||+|+||+||+|.++     +++|+...     ..+.+.+|+.+++.++|        +||+++++.
T Consensus         4 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~~~~~   75 (396)
T 4eut_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH--------KNIVKLFAI   75 (396)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC--------TTBCCEEEE
T ss_pred             CCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC--------CCCCeEEEe
Confidence            4455678999999999999999999873     35555332     23556789999999988        679999887


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee---CC
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV---DE  215 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~---~~  215 (284)
                      +.  .......|+||||+ +++|.+++..... ..+++..+..++.||+.||.|||++ ||+||||||+|||+..   ..
T Consensus        76 ~~--~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~  152 (396)
T 4eut_A           76 EE--ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQ  152 (396)
T ss_dssp             EE--CTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSC
T ss_pred             ec--cCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCc
Confidence            65  22345789999999 6788877765432 2389999999999999999999999 9999999999999832   23


Q ss_pred             CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        216 ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      +.++|+|||++...... ......+||+.|+|||++.+...
T Consensus       153 ~~~kL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~  192 (396)
T 4eut_A          153 SVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVL  192 (396)
T ss_dssp             EEEEECCGGGCEECCCG-GGSSCSSSCCTTCCHHHHHHHCC
T ss_pred             eeEEEecCCCceEccCC-CccccccCCccccCHHHhhcccc
Confidence            57999999998765443 22335679999999999976443

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.95  E-value=1.6e-27  Score=211.42  Aligned_cols=169  Identities=18%  Similarity=0.139  Sum_probs=125.1

Q ss_pred             ccceEEEEEecccCceeEEEecce--------eEEEecCCCChhhHH---------------HHHHHHhhhcCCCCCccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQFPETALD---------------EIKLLKCVRDGDVNDPYR  131 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~~~~~~~---------------E~~~l~~l~~~~~~~~~~  131 (284)
                      .++|++.+.||+|+||+||+|.+.        .++++..........               |+.+++.+.|        
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h--------  107 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY--------  107 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSC--------
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccc--------
Confidence            368999999999999999999763        255554443333344               4444444555        


Q ss_pred             chhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        132 ERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       132 ~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      +||+++++.+.........+|+||||++++|.+++....  .+++..+..++.||+.||.|||++ ||+||||||+|||+
T Consensus       108 ~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll  184 (345)
T 2v62_A          108 LGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLL  184 (345)
T ss_dssp             CCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEE
T ss_pred             cCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEE
Confidence            779999988774444578999999999888888876554  599999999999999999999999 99999999999999


Q ss_pred             eeCC-CcEEEEeccchhHhhhCCC-------CCCcccCCCCccchhhhhhc
Q psy16752        212 CVDE-ARVKTLALNATELAATGHK-------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       212 ~~~~-~~v~l~Dfg~a~~~~~~~~-------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.+. +.++|+|||++........       ......||+.|+|||++.+.
T Consensus       185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  235 (345)
T 2v62_A          185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV  235 (345)
T ss_dssp             ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTC
T ss_pred             ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCC
Confidence            6552 3999999999876543221       11356799999999998764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.4e-27  Score=212.69  Aligned_cols=163  Identities=20%  Similarity=0.306  Sum_probs=132.7

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecC--------CCChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSP--------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++.+.||+|+||+||+|.+.        +++|+..        .....+.+|+.+++.+.+       |++|+.+++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-------h~~iv~~~~  126 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ-------SPFLVTLHY  126 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHT-------CTTBCCEEE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccC-------CCceeEEEE
Confidence            57999999999999999998751        3444422        234567789999999963       277999888


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v  218 (284)
                      .+.    ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.+
T Consensus       127 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~-~~~~  198 (355)
T 1vzo_A          127 AFQ----TETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDS-NGHV  198 (355)
T ss_dssp             EEE----ETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECT-TSCE
T ss_pred             EEe----eCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECC-CCcE
Confidence            776    677899999999 678888887654  599999999999999999999999 9999999999999954 4899


Q ss_pred             EEEeccchhHhhhC-CCCCCcccCCCCccchhhhhh
Q psy16752        219 KTLALNATELAATG-HKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~-~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|+|||++...... .......+||+.|+|||++.+
T Consensus       199 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  234 (355)
T 1vzo_A          199 VLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG  234 (355)
T ss_dssp             EESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTT
T ss_pred             EEeeCCCCeecccCCCCcccCcccCcCccChhhhcC
Confidence            99999998754322 223345689999999999975

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=1.6e-27  Score=203.48  Aligned_cols=164  Identities=15%  Similarity=0.218  Sum_probs=133.0

Q ss_pred             ccceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .++|++.+.||+|+||+||+|.++    .++|+...   ....+.+|+.+++.++|        ++|+++++.+.    .
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~----~   74 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSH--------PKLVKFYGVCS----K   74 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC----S
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCC--------CCEeeEEEEEc----c
Confidence            357999999999999999999763    34454332   34567899999999987        66999988775    7


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||+. ||+||||||+||+++. ++.++|+|||++
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~-~~~~~l~Dfg~~  151 (268)
T 3sxs_A           75 EYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDR-DLCVKVSDFGMT  151 (268)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECT-TCCEEECCTTCE
T ss_pred             CCceEEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECC-CCCEEEccCccc
Confidence            77899999999 677888876653 3499999999999999999999999 9999999999999954 489999999998


Q ss_pred             hHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      ........ ......+|+.|+|||++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  179 (268)
T 3sxs_A          152 RYVLDDQYVSSVGTKFPVKWSAPEVFHY  179 (268)
T ss_dssp             EECCTTCEEECCSCCCCGGGCCHHHHHH
T ss_pred             eecchhhhhcccCCCcCcccCCHHHHhc
Confidence            76544322 2234557788999999865

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.95  E-value=3.4e-27  Score=208.44  Aligned_cols=164  Identities=26%  Similarity=0.354  Sum_probs=135.1

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|.+.+.||+|+||.||+|.+.     .++++...       ..+.+.+|+.+++.+.|        +||+++++.+.
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~  111 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH--------QHVVGFHGFFE  111 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC--------TTBCCEEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEEe
Confidence            457999999999999999999763     34444322       13456789999999987        67999998877


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+
T Consensus       112 ----~~~~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~-~~~~kl~  183 (335)
T 2owb_A          112 ----DNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNE-DLEVKIG  183 (335)
T ss_dssp             ----CSSEEEEEECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT-TCCEEEC
T ss_pred             ----cCCeEEEEEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcC-CCCEEEe
Confidence                778999999999 567777776543  599999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++..............||+.|+|||++.+.
T Consensus       184 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  216 (335)
T 2owb_A          184 DFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK  216 (335)
T ss_dssp             CCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTS
T ss_pred             eccCceecccCcccccccCCCccccCHHHhccC
Confidence            999987665444445567899999999998654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.95  E-value=3.1e-27  Score=208.21  Aligned_cols=164  Identities=27%  Similarity=0.345  Sum_probs=128.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|+||.||+|.+.     +++|.....      ...+.+|+.+++.++|        +||+++++.+.  
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~--   94 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH--------ENLVNLLEVCK--   94 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE--
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCC--------CCEeeEEEEee--
Confidence            57999999999999999999873     345543221      2335689999999988        67999998876  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ....+|+||||+.++++..+.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|||
T Consensus        95 --~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~-~~~~kl~Dfg  169 (331)
T 4aaa_A           95 --KKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQ-SGVVKLCDFG  169 (331)
T ss_dssp             --ETTEEEEEEECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECT-TSCEEECCCT
T ss_pred             --cCCEEEEEEecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcC-CCcEEEEeCC
Confidence              678899999999887777765543 3599999999999999999999999 9999999999999954 4799999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++..............||+.|+|||++.+.
T Consensus       170 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  199 (331)
T 4aaa_A          170 FARTLAAPGEVYDDEVATRWYRAPELLVGD  199 (331)
T ss_dssp             TC------------CCCCCTTCCHHHHTTC
T ss_pred             CceeecCCccccCCCcCCccccCcccccCC
Confidence            998766554555567899999999999764

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=2.5e-27  Score=208.23  Aligned_cols=161  Identities=22%  Similarity=0.324  Sum_probs=131.9

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .|...+.||+|+||.||+|.++     +++|+...    ..+.+.+|+.+++.++|        +||+++++.+.    .
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~----~  113 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH--------FNVVEMYKSYL----V  113 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC--------TTBCCEEEEEE----E
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC--------CCcceEEEEEE----E
Confidence            4888899999999999999763     35554322    23457889999999988        67999998776    5


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....|+||||+ +++|.+.+..   ..+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|||++
T Consensus       114 ~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~  188 (321)
T 2c30_A          114 GEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTL-DGRVKLSDFGFC  188 (321)
T ss_dssp             TTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TCCEEECCCTTC
T ss_pred             CCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECC-CCcEEEeeeeee
Confidence            67899999999 5666666543   2499999999999999999999999 9999999999999954 489999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..............||+.|+|||++.+.
T Consensus       189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~  216 (321)
T 2c30_A          189 AQISKDVPKRKSLVGTPYWMAPEVISRS  216 (321)
T ss_dssp             EECCSSSCCBCCCCSCGGGCCHHHHTTC
T ss_pred             eecccCccccccccCCccccCHhhhcCC
Confidence            7665544445567899999999998654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.95  E-value=8.9e-28  Score=207.21  Aligned_cols=163  Identities=16%  Similarity=0.208  Sum_probs=131.5

Q ss_pred             eeccceEEEEEecccCceeEEEecce------------eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK------------TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~------------~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      +..++|++.+.||+|+||+||+|.++            .++++...    ..+.+.+|+.+++.++|        +||++
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~   76 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH--------KHLVL   76 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCC--------TTBCC
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCC--------CCEeE
Confidence            34468999999999999999999763            23444322    23557889999999988        67999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      +++.+.    .....++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+.
T Consensus        77 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~  150 (289)
T 4fvq_A           77 NYGVCV----CGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNILLIREE  150 (289)
T ss_dssp             EEEEEC----CTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEEECC
T ss_pred             EEEEEE----eCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceEEEecCC
Confidence            998776    667789999999 578888877654 3489999999999999999999999 999999999999997764


Q ss_pred             Cc-------EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        216 AR-------VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       216 ~~-------v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ..       ++|+|||++......    ....||++|+|||++.+
T Consensus       151 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~  191 (289)
T 4fvq_A          151 DRKTGNPPFIKLSDPGISITVLPK----DILQERIPWVPPECIEN  191 (289)
T ss_dssp             BGGGTBCCEEEECCCCSCTTTSCH----HHHHHTTTTSCHHHHHC
T ss_pred             cccccccceeeeccCcccccccCc----cccCCcCcccCHHHhCC
Confidence            32       999999998644221    24568999999999975

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.95  E-value=2e-27  Score=209.03  Aligned_cols=164  Identities=20%  Similarity=0.219  Sum_probs=129.2

Q ss_pred             ccceEEEEEecccCceeEEEecce---------eEEEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---------TQVLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .++|++.+.||+|+||+||+|.+.         .+++..     ......+.+|+.+++.++|        +||++++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~   83 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH--------AHIVRLLGL   83 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCC--------TTBCCEEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCC--------CCcCeEEEE
Confidence            457999999999999999999752         333432     1223567789999999988        679999886


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.     ....++||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. .+.++
T Consensus        84 ~~-----~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~-~~~~k  155 (325)
T 3kex_A           84 CP-----GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKS-PSQVQ  155 (325)
T ss_dssp             EC-----BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESS-SSCEE
T ss_pred             Ec-----CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECC-CCeEE
Confidence            53     45688999999 688888887643 3589999999999999999999999 9999999999999954 48999


Q ss_pred             EEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++........  ......||+.|+|||++.+.
T Consensus       156 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (325)
T 3kex_A          156 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG  192 (325)
T ss_dssp             ECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHC
T ss_pred             ECCCCcccccCcccccccccCCCCcccccChHHhccC
Confidence            999999987654432  22355688899999998654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.95  E-value=4.4e-27  Score=207.10  Aligned_cols=166  Identities=20%  Similarity=0.244  Sum_probs=133.2

Q ss_pred             eccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQL  137 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l  137 (284)
                      ..++|++.+.||+|+||.||+|.+          ..+++.....     .+.+.+|+.+++.+ .|        +||+++
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~~iv~~  115 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH--------ENIVNL  115 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--------TTBCCE
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCC--------CCeeeE
Confidence            346799999999999999999975          2345544332     24577899999999 66        779999


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCC
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI  204 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDi  204 (284)
                      ++.+.    ....+|+||||+ +++|.+++....            ...+++..+..++.||+.||.|||++ ||+||||
T Consensus       116 ~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dl  190 (333)
T 2i1m_A          116 LGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDV  190 (333)
T ss_dssp             EEEEC----SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCC
T ss_pred             EEEEe----cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCc
Confidence            98776    677899999999 668888887542            23479999999999999999999999 9999999


Q ss_pred             CCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        205 KPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       205 Kp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||+|||++.+ +.++|+|||++........  ......+|+.|+|||++.+
T Consensus       191 kp~NIl~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  240 (333)
T 2i1m_A          191 AARNVLLTNG-HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD  240 (333)
T ss_dssp             SGGGCEEEGG-GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHH
T ss_pred             ccceEEECCC-CeEEECccccccccccccceeecCCCCCCccccCHHHhcc
Confidence            9999999554 8999999999886554332  2334567889999998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=1.5e-27  Score=212.04  Aligned_cols=169  Identities=19%  Similarity=0.220  Sum_probs=131.4

Q ss_pred             eccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      ..++|++.+.||+|+||.||+|.+          .+++|+....     .+.+.+|+.++..+.+       |+||++++
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-------hpniv~~~   92 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-------HLNVVNLL   92 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC-------CTTBCCEE
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcC-------Ccceeeee
Confidence            346899999999999999999973          2455554332     2347889999999943       37799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCC----------------------------------------------
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY----------------------------------------------  171 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~----------------------------------------------  171 (284)
                      +++.   .....+++||||+ +|+|.+++.....                                              
T Consensus        93 ~~~~---~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (359)
T 3vhe_A           93 GACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE  169 (359)
T ss_dssp             EEEC---STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred             eeee---cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence            8765   1345689999999 6788888765431                                              


Q ss_pred             ------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCC
Q psy16752        172 ------------------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGH  233 (284)
Q Consensus       172 ------------------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~  233 (284)
                                        ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|||++.......
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK-NVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGG-GCEEECCCGGGSCTTSCT
T ss_pred             ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCC-CcEEEEeccceeeecccc
Confidence                              1188999999999999999999999 99999999999999544 899999999997654332


Q ss_pred             C--CCCcccCCCCccchhhhhhc
Q psy16752        234 K--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       234 ~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .  ......||+.|+|||++.+.
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~  270 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDR  270 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHC
T ss_pred             cchhccccCCCceeEChhhhcCC
Confidence            2  23356789999999998653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=2.9e-27  Score=207.60  Aligned_cols=177  Identities=23%  Similarity=0.288  Sum_probs=137.8

Q ss_pred             CcccccccceeccceEEEEEecccCceeEEEecc-----eeEEEecCC----------CChhhHHHHHHHHhhhcCCCCC
Q psy16752         64 GYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ----------FPETALDEIKLLKCVRDGDVND  128 (284)
Q Consensus        64 ~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~~~  128 (284)
                      ...+...+..+.++|++.+.||+|+||.||+|.+     .+++|....          ....+.+|+.+++.+.+.    
T Consensus        31 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~----  106 (320)
T 3a99_A           31 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG----  106 (320)
T ss_dssp             ---------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSS----
T ss_pred             ccCcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccC----
Confidence            3445556667778999999999999999999975     234444221          235677899999999763    


Q ss_pred             cccchhccccccceEeccCCeEEEEEeccCC--ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCC
Q psy16752        129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLG--HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKP  206 (284)
Q Consensus       129 ~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~--~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp  206 (284)
                        +++++++++++.    ....+++|||++.  ++|.+++....  .+++..+..++.||+.||.|||+. ||+||||||
T Consensus       107 --~~~i~~~~~~~~----~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp  177 (320)
T 3a99_A          107 --FSGVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKD  177 (320)
T ss_dssp             --SCSBCCEEEEEE----CSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSG
T ss_pred             --CCCceEEEEEEe----cCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC-CcEeCCCCH
Confidence              277999999877    7788999999994  78888887654  589999999999999999999999 999999999


Q ss_pred             CCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        207 ENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       207 ~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|||++.+.+.++|+|||++......  ......||+.|+|||++.+.-
T Consensus       178 ~NIll~~~~~~~kL~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~  224 (320)
T 3a99_A          178 ENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHR  224 (320)
T ss_dssp             GGEEEETTTTEEEECCCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSC
T ss_pred             HHEEEeCCCCCEEEeeCccccccccc--cccCCCCCccCCChHHhccCC
Confidence            99999756789999999998765432  233567999999999986543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.95  E-value=9.9e-27  Score=201.16  Aligned_cols=169  Identities=23%  Similarity=0.336  Sum_probs=133.6

Q ss_pred             eeccceEEEEEecccCceeEEEecc-----eeEEEe--cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLV--SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+.++|++.+.||+|+||+||+|.+     ..++|+  .......+.+|+.+++.+.|++        ++..+..+   .
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~--------~i~~~~~~---~   74 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGV--------GIPTIRWC---G   74 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTST--------TCCCEEEE---E
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCC--------CCCccccc---c
Confidence            3457899999999999999999985     234444  2334567899999999999843        33333322   2


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe--eCCCcEEEEec
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC--VDEARVKTLAL  223 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~--~~~~~v~l~Df  223 (284)
                      ......++||||++++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++  .+.+.++|+||
T Consensus        75 ~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Df  152 (296)
T 3uzp_A           75 AEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDF  152 (296)
T ss_dssp             EETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred             CCCCceEEEEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence            2667889999999889988887543 3599999999999999999999999 999999999999995  34579999999


Q ss_pred             cchhHhhhCCC-------CCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHK-------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~-------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++........       ......||+.|+|||++.+.
T Consensus       153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  190 (296)
T 3uzp_A          153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI  190 (296)
T ss_dssp             TTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTC
T ss_pred             CCcccccccccccccccccccccccccccCChhhhcCC
Confidence            99876554332       13466899999999998763

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.95  E-value=3.4e-27  Score=210.25  Aligned_cols=169  Identities=18%  Similarity=0.261  Sum_probs=128.6

Q ss_pred             eeccceEEEEEecccCceeEEEecce----eEEEecCCC---------------ChhhHHHHHHHHhhhcCCCCCcccch
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF---------------PETALDEIKLLKCVRDGDVNDPYRER  133 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~---------------~~~~~~E~~~l~~l~~~~~~~~~~~~  133 (284)
                      .+.++|++.+.||+|+||.||+|.+.    +++|.....               .+.+.+|+.+++.++|        +|
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~   90 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH--------PN   90 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCC--------TT
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCC--------cC
Confidence            34568999999999999999999762    344432111               1567899999999988        67


Q ss_pred             hccccccceEec-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe
Q psy16752        134 VVQLLDDFKICG-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC  212 (284)
Q Consensus       134 i~~l~~~~~~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~  212 (284)
                      |+++++.+.... .....+|+||||+++++.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILLA  168 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEC
T ss_pred             ccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEEc
Confidence            999988775332 3556899999999999999987654 3599999999999999999999999 999999999999995


Q ss_pred             eCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        213 VDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       213 ~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      . ++.++|+|||++...... .......||+.|+|||++.+
T Consensus       169 ~-~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~  207 (362)
T 3pg1_A          169 D-NNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQ  207 (362)
T ss_dssp             T-TCCEEECCTTC----------------CGGGCCHHHHTT
T ss_pred             C-CCCEEEEecCcccccccc-cccceecccceecCcHHhcC
Confidence            4 489999999998754433 23335679999999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=1.2e-27  Score=207.63  Aligned_cols=170  Identities=24%  Similarity=0.367  Sum_probs=131.6

Q ss_pred             ccccceeccceEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         68 VKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        68 ~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +..+..+.++|++.+.||+|+||.||+|.++     .++++..    ...+.+.+|+.+++.+.|        ++|++++
T Consensus        11 ~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~   82 (302)
T 2j7t_A           11 VRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH--------PYIVKLL   82 (302)
T ss_dssp             CBSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCC--------TTBCCEE
T ss_pred             cccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCC--------CCEeeee
Confidence            3344445578999999999999999999873     3444432    223567889999999987        6799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+.    ....+|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||+. ||+||||||+||+++. ++.
T Consensus        83 ~~~~----~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~-~~~  155 (302)
T 2j7t_A           83 GAYY----HDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTL-EGD  155 (302)
T ss_dssp             EEEE----CC-CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECT-TSC
T ss_pred             eeee----eCCeEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECC-CCC
Confidence            8776    677899999999 556666665433 4599999999999999999999999 9999999999999954 489


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ++|+|||++..............||+.|+|||++.
T Consensus       156 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (302)
T 2j7t_A          156 IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVM  190 (302)
T ss_dssp             EEECCCHHHHHHHHHHHC-----CCGGGCCHHHHH
T ss_pred             EEEEECCCCccccccccccccccCChhhcCCeeec
Confidence            99999998775544333344567999999999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.95  E-value=4.4e-27  Score=206.69  Aligned_cols=163  Identities=23%  Similarity=0.353  Sum_probs=131.5

Q ss_pred             ccceEEEEEecccCceeEEEecc-----eeEEEecC-CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSP-QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      .++|++.+.||+|+||+||+|.+     .+++|+.. .....+.+|+.+++.+.+       |++|+++++.+.  .+..
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~-------~~~i~~~~~~~~--~~~~  105 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG-------GPNIITLADIVK--DPVS  105 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTT-------STTBCCEEEEEE--CTTT
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCC-------CCCEEEeeeeec--cCCC
Confidence            46799999999999999999975     33555543 345678899999999982       277999888765  2236


Q ss_pred             eEEEEEeccCC-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVLG-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...++||||+. +++.+.+ .    .+++..+..++.||+.||.|||++ ||+||||||+|||++.++..++|+|||++.
T Consensus       106 ~~~~lv~e~~~~~~l~~~~-~----~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~  179 (330)
T 3nsz_A          106 RTPALVFEHVNNTDFKQLY-Q----TLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  179 (330)
T ss_dssp             CCEEEEEECCCCCCHHHHG-G----GCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CceEEEEeccCchhHHHHH-H----hCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence            78899999995 5555544 2    289999999999999999999999 999999999999997676699999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ...... ......||+.|+|||++.+
T Consensus       180 ~~~~~~-~~~~~~~~~~y~aPE~~~~  204 (330)
T 3nsz_A          180 FYHPGQ-EYNVRVASRYFKGPELLVD  204 (330)
T ss_dssp             ECCTTC-CCCSCCSCGGGCCHHHHTT
T ss_pred             EcCCCC-ccccccccccccChhhhcC
Confidence            655442 3345679999999999865

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.95  E-value=1.7e-27  Score=204.43  Aligned_cols=163  Identities=20%  Similarity=0.359  Sum_probs=116.0

Q ss_pred             ceEEEEEecccCceeEEEecc-----eeEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGS-----KTQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +|++.+.||+|+||.||+|.+     ..++|+..       ...+.+.+|+.+++.++|        +||+++++.+.  
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~--   81 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH--------PSILELYNYFE--   81 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCC--------TTBCCEEEEEE--
T ss_pred             cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCC--------CCeEeEEEEEc--
Confidence            599999999999999999975     23444432       123567889999999987        67999998876  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        .....|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.++|+||
T Consensus        82 --~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~-~~~~kl~df  156 (278)
T 3cok_A           82 --DSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTR-NMNIKIADF  156 (278)
T ss_dssp             --CSSEEEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECT-TCCEEECCC
T ss_pred             --cCCeEEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcC-CCCEEEEee
Confidence              778899999999 567777766542 4599999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++..............||+.|+|||++.+.
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  187 (278)
T 3cok_A          157 GLATQLKMPHEKHYTLCGTPNYISPEIATRS  187 (278)
T ss_dssp             TTCEECC------------------------
T ss_pred             cceeeccCCCCcceeccCCCCcCCcchhcCC
Confidence            9987655443444466899999999998653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.95  E-value=1e-27  Score=218.29  Aligned_cols=163  Identities=23%  Similarity=0.389  Sum_probs=123.8

Q ss_pred             eccceEEEEEecccCceeEEEecc-----eeEEEecCC------------CChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ------------FPETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~------------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      +.++|.+.+.||+|+||+||+|.+     .+++|+...            ....+.+|+.+++.++|        +||++
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~  204 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH--------PCIIK  204 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC--------TTBCC
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC--------CCEee
Confidence            456899999999999999999976     235554321            12357899999999988        67999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-  214 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-  214 (284)
                      +++.+.     ...+|+||||+ +++|.+.+...  ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ 
T Consensus       205 l~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~  276 (419)
T 3i6u_A          205 IKNFFD-----AEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQE  276 (419)
T ss_dssp             CCEEEE-----SSEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSS
T ss_pred             EEEEEe-----cCceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCC
Confidence            988764     44579999999 67887776544  3599999999999999999999999 99999999999999654 


Q ss_pred             -CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        215 -EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       215 -~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                       ...++|+|||++...... ....+.+||+.|+|||++.+
T Consensus       277 ~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~  315 (419)
T 3i6u_A          277 EDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVS  315 (419)
T ss_dssp             SSCCEEECCSSTTTSCC------------CTTCCTTTTC-
T ss_pred             CcceEEEeecccceecCCC-ccccccCCCCCccCceeeec
Confidence             236999999999865433 33346789999999999853

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=3.1e-27  Score=211.44  Aligned_cols=163  Identities=25%  Similarity=0.356  Sum_probs=125.4

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++++.||+|+||.||+|.++     +++|.....      ...+.+|+.+++.++|        +||+++++.+..
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~l~~~~~~   95 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH--------ENVIGLLDVFTP   95 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCB--------TTBCCCSEEECS
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC--------cCCCCceeeEec
Confidence            457999999999999999999762     355554221      2456789999999988        669998887652


Q ss_pred             ecc--CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ...  ....+|+||||++++|.+.+...   .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~-~~~~kl~  170 (367)
T 1cm8_A           96 DETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNE-DCELKIL  170 (367)
T ss_dssp             CSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECT-TCCEEEC
T ss_pred             CCccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcC-CCCEEEE
Confidence            111  22467999999988888887653   499999999999999999999999 9999999999999955 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++.....   .....++|+.|+|||++.+
T Consensus       171 Dfg~a~~~~~---~~~~~~~t~~y~aPE~~~~  199 (367)
T 1cm8_A          171 DFGLARQADS---EMTGYVVTRWYRAPEVILN  199 (367)
T ss_dssp             CCTTCEECCS---SCCSSCSCGGGCCTHHHHT
T ss_pred             eeeccccccc---ccCcCcCCCCcCCHHHHhC
Confidence            9999876432   2345679999999999876

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.94  E-value=9e-28  Score=211.44  Aligned_cols=173  Identities=25%  Similarity=0.360  Sum_probs=134.9

Q ss_pred             cccceeccceEEE-EEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         69 KIGMLFNNRYRVT-RKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        69 ~~~~~~~~~y~i~-~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      ..++.+.++|.+. +.||+|+||+||+|.++     +++|+...      ....+.+|+.++..+.+       |++|++
T Consensus        21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~-------~~~iv~   93 (327)
T 3lm5_A           21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKS-------CPRVIN   93 (327)
T ss_dssp             BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTT-------CTTBCC
T ss_pred             HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccC-------CCCEEE
Confidence            4456667789998 89999999999999763     34444322      23567889999999865       377999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee--
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV--  213 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~--  213 (284)
                      +++.+.    ....+|+||||+ +++|.+.+.......+++..+..++.||+.||.|||++ ||+||||||+|||++.  
T Consensus        94 ~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NIl~~~~~  168 (327)
T 3lm5_A           94 LHEVYE----NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILLSSIY  168 (327)
T ss_dssp             EEEEEE----CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESCBT
T ss_pred             EEEEEE----eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHEEEecCC
Confidence            999877    788899999999 66887777654445699999999999999999999999 9999999999999965  


Q ss_pred             CCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        214 DEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.+.++|+|||++....... .....+||+.|+|||++.+.
T Consensus       169 ~~~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~  208 (327)
T 3lm5_A          169 PLGDIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYD  208 (327)
T ss_dssp             TBCCEEECCGGGCEEC----------CCCGGGCCHHHHTTC
T ss_pred             CCCcEEEeeCccccccCCcc-ccccccCCcCccCCeeecCC
Confidence            25799999999987654432 23356799999999998654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.94  E-value=7.5e-28  Score=218.01  Aligned_cols=170  Identities=24%  Similarity=0.336  Sum_probs=123.4

Q ss_pred             eccceEEE-EEecccCceeEEEecce-------eEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         74 FNNRYRVT-RKLGWGHFSTVWFTGSK-------TQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        74 ~~~~y~i~-~~LG~G~fg~Vy~a~~~-------~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +.+.|.+. ++||+|+||+||+|.++       +++|....  ....+.+|+.+++.++|        +||+++++++. 
T Consensus        18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~-   88 (405)
T 3rgf_A           18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH--------PNVISLQKVFL-   88 (405)
T ss_dssp             HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCC--------TTBCCCCEEEE-
T ss_pred             hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCC--------CCeeeEeeEEe-
Confidence            34568774 47999999999999843       35555433  34578899999999988        67999988773 


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhhC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe---e
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKSK-------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC---V  213 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~---~  213 (284)
                       ......+|+||||++++|++.+....       ...+++..++.++.||+.||.|||++ |||||||||+||||.   .
T Consensus        89 -~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~  166 (405)
T 3rgf_A           89 -SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGP  166 (405)
T ss_dssp             -ETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSST
T ss_pred             -cCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCC
Confidence             12567899999999999998886432       12389999999999999999999999 999999999999994   2


Q ss_pred             CCCcEEEEeccchhHhhhCC---CCCCcccCCCCccchhhhhhc
Q psy16752        214 DEARVKTLALNATELAATGH---KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~~---~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.+.++|+|||++.......   ......+||+.|+|||++.+.
T Consensus       167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  210 (405)
T 3rgf_A          167 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA  210 (405)
T ss_dssp             TTTCEEECCTTCCC----------------CCCTTCCHHHHTTC
T ss_pred             CCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCC
Confidence            34799999999998665432   223356899999999999763

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.94  E-value=6.1e-27  Score=202.34  Aligned_cols=168  Identities=23%  Similarity=0.342  Sum_probs=129.1

Q ss_pred             eccceEEEEEecccCceeEEEecc-----eeEEEe--cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLV--SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.++|++.+.||+|+||+||+|.+     ..++|+  .......+.+|+.+++.+.|++        ++..+..+   ..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~--------~i~~~~~~---~~   75 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGV--------GIPTIRWC---GA   75 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTST--------TCCCEEEE---EE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCC--------CCCeeeee---cC
Confidence            456899999999999999999985     234443  2344567899999999999843        44433332   22


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe--eCCCcEEEEecc
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC--VDEARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~--~~~~~v~l~Dfg  224 (284)
                      .....++||||++++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||+.  .+.+.++|+|||
T Consensus        76 ~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg  153 (296)
T 4hgt_A           76 EGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFG  153 (296)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred             CCCceEEEEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence            677889999999889988887543 3599999999999999999999999 999999999999994  345789999999


Q ss_pred             chhHhhhCCC-------CCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHK-------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~-------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++........       ......||+.|+|||++.+.
T Consensus       154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  190 (296)
T 4hgt_A          154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI  190 (296)
T ss_dssp             TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTC
T ss_pred             cceeccCcccCccCCCCcccccCCCccccchHHhcCC
Confidence            9886554322       22356899999999998754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.94  E-value=4.8e-27  Score=205.05  Aligned_cols=171  Identities=19%  Similarity=0.266  Sum_probs=128.8

Q ss_pred             cceeccceEEEEEecccCceeEEEecce-----eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      |..+.++|++.+.||+|+||.||+|.+.     .++|.....    .+.+.+|+.+++.++|        +||+++++.+
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~   77 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH--------DNIVKVFEIL   77 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCC--------TTBCCEEEEE
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCC--------CCeeEEEEec
Confidence            5566789999999999999999999763     344443222    2456789999999988        6688887765


Q ss_pred             eE----------eccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        142 KI----------CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       142 ~~----------~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      ..          .......+|+||||++++|.+.+..   ..+++..+..++.||+.||.|||++ ||+||||||+|||+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~  153 (320)
T 2i6l_A           78 GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFI  153 (320)
T ss_dssp             CTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEE
T ss_pred             cccccccccccccccccCceeEEeeccCCCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEE
Confidence            21          1124578999999999898888754   3489999999999999999999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchhHhhhCC---CCCCcccCCCCccchhhhhh
Q psy16752        212 CVDEARVKTLALNATELAATGH---KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~~~~~~~---~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +.+++.++|+|||++.......   .......+|+.|+|||++.+
T Consensus       154 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (320)
T 2i6l_A          154 NTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS  198 (320)
T ss_dssp             ETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHC
T ss_pred             cCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcC
Confidence            7666899999999987654321   22234568999999998864

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.94  E-value=7.2e-27  Score=205.79  Aligned_cols=164  Identities=22%  Similarity=0.282  Sum_probs=124.3

Q ss_pred             ccceEEEEEecccCceeEEEecce---------eEEEec-----CCCChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---------TQVLVS-----PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .++|++.+.||+|+||+||+|.+.         .+++..     ......+.+|+.+++.++|        +||+++++.
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~   85 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN--------PHVCRLLGI   85 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCB--------TTBCCCCEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCC--------CCeeEEEEE
Confidence            468999999999999999999762         233332     1234567889999999988        679999987


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.    .. ..++||+++ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++
T Consensus        86 ~~----~~-~~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~-~~~k  157 (327)
T 3lzb_A           86 CL----TS-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTP-QHVK  157 (327)
T ss_dssp             EE----SS-SEEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEET-TEEE
T ss_pred             Ee----cC-CceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcCC-CCEE
Confidence            75    33 377888888 778888887654 3599999999999999999999999 99999999999999655 7999


Q ss_pred             EEeccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++.........  .....+|+.|+|||++.+.
T Consensus       158 L~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  194 (327)
T 3lzb_A          158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR  194 (327)
T ss_dssp             ECCTTC----------------CCCGGGSCHHHHHHC
T ss_pred             EccCcceeEccCccccccccCCCccccccCHHHHcCC
Confidence            9999999876543322  2244578889999998754

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.94  E-value=4e-27  Score=208.15  Aligned_cols=171  Identities=19%  Similarity=0.259  Sum_probs=116.2

Q ss_pred             cceeccceEEEE-EecccCceeEEEecce-----eEEEecCCCChhhHHHHHH-HHhhhcCCCCCcccchhccccccceE
Q psy16752         71 GMLFNNRYRVTR-KLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKL-LKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        71 ~~~~~~~y~i~~-~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~-l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ...+.++|++.+ .||+|+||+||+|.++     +++|+.... ....+|+.. ++.+.|        +|++++++.+..
T Consensus        23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~e~~~~~~~~~h--------~~i~~~~~~~~~   93 (336)
T 3fhr_A           23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-PKARQEVDHHWQASGG--------PHIVCILDVYEN   93 (336)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-HHHHHHHHHHHHHTTS--------TTBCCEEEEEEE
T ss_pred             CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-HHHHHHHHHHHHhcCC--------CChHHHHHHHhh
Confidence            344556899965 6999999999999763     356655433 333444443 444555        779999988875


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcEEE
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARVKT  220 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v~l  220 (284)
                      .......+++||||+ +++|.+.+.......+++..+..++.||+.||.|||++ ||+||||||+|||++.+  .+.++|
T Consensus        94 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~~kl  172 (336)
T 3fhr_A           94 MHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKL  172 (336)
T ss_dssp             EETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEE
T ss_pred             ccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEEecCCCceEEE
Confidence            555577899999999 66888888876555699999999999999999999999 99999999999999654  356999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|||++......  .....+||+.|+|||++.+
T Consensus       173 ~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~  203 (336)
T 3fhr_A          173 TDFGFAKETTQN--ALQTPCYTPYYVAPEVLGP  203 (336)
T ss_dssp             CCCTTCEEC------------------------
T ss_pred             eccccceecccc--ccccCCCCcCccChhhhCC
Confidence            999998754432  2335678999999999843

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.94  E-value=5.9e-27  Score=204.18  Aligned_cols=166  Identities=20%  Similarity=0.241  Sum_probs=133.7

Q ss_pred             ccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhcccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQLL  138 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~  138 (284)
                      .++|++.+.||+|+||.||+|.+          ..++|.....     .+.+.+|+.+++.+ .|        +||++++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------~~i~~~~   93 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--------MNIVNLL   93 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--------TTBCCEE
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccC--------CCeeeEE
Confidence            45799999999999999999974          2355544322     25577899999999 66        7799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCC----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEe
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY----------------RGIPLENVRSIIRQILQGLNYLHTKCRIIH  201 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~----------------~~~~~~~~~~i~~qi~~aL~~LH~~~givH  201 (284)
                      +.+.    .....++||||+ +++|.+.+.....                ..+++..+..++.||+.||.|||++ ||+|
T Consensus        94 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H  168 (313)
T 1t46_A           94 GACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIH  168 (313)
T ss_dssp             EEEC----SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred             EEEe----cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-Ceec
Confidence            8776    677889999999 6688888876532                1489999999999999999999999 9999


Q ss_pred             cCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        202 TDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       202 rDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||||+||+++. ++.++|+|||++.........  .....+|+.|+|||++.+.
T Consensus       169 ~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  222 (313)
T 1t46_A          169 RDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC  222 (313)
T ss_dssp             SCCSGGGEEEET-TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHC
T ss_pred             CCCccceEEEcC-CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCC
Confidence            999999999954 489999999998766544322  2345678899999988543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.94  E-value=3.1e-27  Score=219.43  Aligned_cols=165  Identities=19%  Similarity=0.212  Sum_probs=135.3

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ..+|++.+.||+|+||.||+|.++     +++|....   ..+.+.+|+.+++.++|        +||+++++++.    
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~l~~~~~----  286 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH--------PNLVQLLGVCT----  286 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC----
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCC--------CCEeeEEEEEe----
Confidence            457999999999999999999763     35555432   24568899999999988        67999998776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||+ +|+|.+++.......+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|||+
T Consensus       287 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~-~~~~kl~DFG~  364 (495)
T 1opk_A          287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGE-NHLVKVADFGL  364 (495)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECG-GGCEEECCTTC
T ss_pred             cCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECC-CCcEEEeeccc
Confidence            677899999999 68999888775545699999999999999999999999 9999999999999954 48999999999


Q ss_pred             hhHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      +........ ......+++.|+|||++.+
T Consensus       365 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~  393 (495)
T 1opk_A          365 SRLMTGDTYTAHAGAKFPIKWTAPESLAY  393 (495)
T ss_dssp             EECCTTCCEECCTTCCCCGGGCCHHHHHH
T ss_pred             ceeccCCceeecCCCcCCcceeCHhHHhc
Confidence            886543321 2224456788999999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.94  E-value=4.3e-27  Score=205.15  Aligned_cols=166  Identities=18%  Similarity=0.233  Sum_probs=132.7

Q ss_pred             ccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .++|.+.+.||+|+||.||+|.+          ..++|+....     .+.+.+|+.+++.++|        +||+++++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~   93 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH--------PHVIKLYG   93 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCC--------TTBCCEEE
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC--------CceeeEEE
Confidence            35799999999999999999975          2345554332     2456789999999987        67999998


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCC----------------------CCCCHHHHHHHHHHHHHHHHHHhhC
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY----------------------RGIPLENVRSIIRQILQGLNYLHTK  196 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~----------------------~~~~~~~~~~i~~qi~~aL~~LH~~  196 (284)
                      .+.    ....+|+||||+ +++|.+++.....                      ..+++..+..++.||+.||.|||++
T Consensus        94 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  169 (314)
T 2ivs_A           94 ACS----QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM  169 (314)
T ss_dssp             EEC----SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEe----cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            776    677899999999 6788888876432                      2388999999999999999999999


Q ss_pred             CCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        197 CRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       197 ~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                       ||+||||||+|||++. ++.++|+|||++........  ......+|+.|+|||++.+.
T Consensus       170 -~ivH~dikp~NIli~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  227 (314)
T 2ivs_A          170 -KLVHRDLAARNILVAE-GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDH  227 (314)
T ss_dssp             -TEECCCCSGGGEEEET-TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHC
T ss_pred             -CCcccccchheEEEcC-CCCEEEccccccccccccccceeccCCCCcccccChhhhcCC
Confidence             9999999999999954 48999999999876544322  22344678889999988653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.94  E-value=2.6e-27  Score=203.81  Aligned_cols=165  Identities=16%  Similarity=0.262  Sum_probs=130.2

Q ss_pred             ccceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .++|++.+.||+|+||+||+|.++    .++|+...   ..+.+.+|+.+++.+.|        ++|+++++++.    .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~----~   90 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH--------EKLVQLYGVCT----K   90 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC--------TTBCCEEEEEC----S
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCC--------CCEeeEEEEEe----c
Confidence            357999999999999999999763    35555432   24567899999999987        66999998776    7


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ...+|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+||+++ +++.++|+|||++
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~-~~~~~kl~Dfg~~  167 (283)
T 3gen_A           91 QRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVN-DQGVVKVSDFGLS  167 (283)
T ss_dssp             SSSEEEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEEC-TTSCEEECSTTGG
T ss_pred             CCCeEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEc-CCCCEEEcccccc
Confidence            77899999999 678888876533 3599999999999999999999999 999999999999995 4489999999998


Q ss_pred             hHhhhCC-CCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGH-KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~-~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ....... .......+|+.|+|||++.+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  196 (283)
T 3gen_A          168 RYVLDDEYTSSVGSKFPVRWSPPEVLMYS  196 (283)
T ss_dssp             GGBCCHHHHSTTSTTSCGGGCCHHHHHHC
T ss_pred             ccccccccccccCCccCcccCCHHHhccC
Confidence            7543221 122345678889999998744

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.94  E-value=6e-27  Score=205.17  Aligned_cols=168  Identities=17%  Similarity=0.225  Sum_probs=132.5

Q ss_pred             eeccceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      +..++|++.+.||+|+||.||+|.++          .++|.....     ...+.+|+.+++.+.|        +||+++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~   93 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC--------HHVVRL   93 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC--------TTBCCE
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCC--------CCEeee
Confidence            34468999999999999999998764          244443322     1246789999999987        669999


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCC
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPEN  208 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~N  208 (284)
                      ++.+.    .....++||||+ +++|.+++....        ...+++..+..++.||+.||.|||++ ||+||||||+|
T Consensus        94 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~N  168 (322)
T 1p4o_A           94 LGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARN  168 (322)
T ss_dssp             EEEEC----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGG
T ss_pred             EEEEc----cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccce
Confidence            88776    677899999999 678888876532        13478999999999999999999999 99999999999


Q ss_pred             eeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        209 VLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       209 Ill~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++. ++.++|+|||++.........  .....+|+.|+|||++.+.
T Consensus       169 Ili~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  215 (322)
T 1p4o_A          169 CMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG  215 (322)
T ss_dssp             EEECT-TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHC
T ss_pred             EEEcC-CCeEEECcCccccccccccccccccCCCCCCCccChhhhccC
Confidence            99954 489999999998765443221  2244678999999998653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.94  E-value=8.7e-27  Score=200.22  Aligned_cols=162  Identities=23%  Similarity=0.381  Sum_probs=129.5

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||+||+|.++     .++++..       .....+.+|+.+++.+.|        ++|+++++.+. 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~-   79 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH--------PNILRLYGYFH-   79 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCC--------TTBCCEEEEEE-
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCC--------CCCcchhheEe-
Confidence            57999999999999999999763     3444431       223457789999999987        67999998876 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         .....++||||+ +++|.+.+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|
T Consensus        80 ---~~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~-~~~~~l~D  152 (279)
T 3fdn_A           80 ---DATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGS-AGELKIAD  152 (279)
T ss_dssp             ---CSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECT-TSCEEECS
T ss_pred             ---cCCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcC-CCCEEEEe
Confidence               778899999999 568888776654  499999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||++......  ......||+.|+|||++.+..
T Consensus       153 fg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~  183 (279)
T 3fdn_A          153 FGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRM  183 (279)
T ss_dssp             CCEESCC----------CCCCTTCCHHHHTTCC
T ss_pred             ccccccCCcc--cccccCCCCCccCHhHhccCC
Confidence            9987544332  233567999999999987654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.3e-27  Score=208.80  Aligned_cols=182  Identities=16%  Similarity=0.220  Sum_probs=136.1

Q ss_pred             cccccccceeccceEEEEEecccCceeEEEecce---eEEEecCC-CChhhHHHHHHHHhh--hcCCCCCcccchhcccc
Q psy16752         65 YHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ-FPETALDEIKLLKCV--RDGDVNDPYRERVVQLL  138 (284)
Q Consensus        65 ~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~-~~~~~~~E~~~l~~l--~~~~~~~~~~~~i~~l~  138 (284)
                      ..+...+..+.++|++.+.||+|+||.||+|.++   +++|+... .......|..++..+  .|        +||++++
T Consensus        26 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h--------~~i~~~~   97 (337)
T 3mdy_A           26 GLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRH--------ENILGFI   97 (337)
T ss_dssp             SSCHHHHTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCC--------TTBCCEE
T ss_pred             CCCcccccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcC--------CCeeeEE
Confidence            3455666677788999999999999999999874   34444322 223345566665554  44        7799998


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------CcEecCCCCCCee
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC-------RIIHTDIKPENVL  210 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------givHrDiKp~NIl  210 (284)
                      +.+.........+|+||||+ +++|.+++...   .+++..+..++.|++.||.|||+++       ||+||||||+|||
T Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nil  174 (337)
T 3mdy_A           98 AADIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL  174 (337)
T ss_dssp             EEEEESCGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEE
T ss_pred             EEEccCCCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEE
Confidence            87763333337899999999 66888888654   4999999999999999999999752       8999999999999


Q ss_pred             EeeCCCcEEEEeccchhHhhhCCCC----CCcccCCCCccchhhhhhccchh
Q psy16752        211 LCVDEARVKTLALNATELAATGHKL----PVSFCSTAPVQEYSELSRRMSKN  258 (284)
Q Consensus       211 l~~~~~~v~l~Dfg~a~~~~~~~~~----~~~~~gt~~~~aPE~l~~~~~~~  258 (284)
                      ++. ++.++|+|||++.........    ..+.+||+.|+|||++.+.....
T Consensus       175 l~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  225 (337)
T 3mdy_A          175 VKK-NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRN  225 (337)
T ss_dssp             ECT-TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTT
T ss_pred             ECC-CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCc
Confidence            954 489999999998654333221    23568999999999998765443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.94  E-value=5.1e-27  Score=201.81  Aligned_cols=165  Identities=25%  Similarity=0.447  Sum_probs=131.0

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC----------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +.++|++.+.||+|+||.||+|.++     .++++...          ..+.+.+|+.+++.+.|        ++|++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~   74 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH--------PNIITLH   74 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC--------TTBCCEE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCC--------CCeeehh
Confidence            3467999999999999999999763     34443221          13557899999999988        6699998


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC--
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE--  215 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~--  215 (284)
                      +.+.    .....++||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+||+++.++  
T Consensus        75 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~  147 (283)
T 3bhy_A           75 DIFE----NKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVP  147 (283)
T ss_dssp             EEEE----CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSSS
T ss_pred             heec----CCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEEEecCCCC
Confidence            8776    778899999999 678888886654  599999999999999999999999 999999999999996553  


Q ss_pred             -CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        216 -ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       216 -~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                       ..++|+|||++....... ......||+.|+|||++.+.
T Consensus       148 ~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  186 (283)
T 3bhy_A          148 NPRIKLIDFGIAHKIEAGN-EFKNIFGTPEFVAPEIVNYE  186 (283)
T ss_dssp             SCCEEECCCTTCEECC---------CCCGGGCCHHHHTTC
T ss_pred             CCceEEEecccceeccCCC-cccccCCCcCccCcceecCC
Confidence             289999999987554332 22355799999999998653

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.94  E-value=7.4e-27  Score=207.13  Aligned_cols=171  Identities=20%  Similarity=0.293  Sum_probs=132.9

Q ss_pred             ccceeccceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      ++..+.++|++.+.||+|+||+||+|.+.     +++|.....     ...+.+|+.+++.++|        +||+++++
T Consensus         5 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~   76 (353)
T 2b9h_A            5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH--------ENIITIFN   76 (353)
T ss_dssp             CCCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCC--------TTBCCEEE
T ss_pred             cccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcC--------CCcCCeee
Confidence            44455678999999999999999999863     355554322     2345689999999988        66888887


Q ss_pred             cceEe-ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE
Q psy16752        140 DFKIC-GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       140 ~~~~~-~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v  218 (284)
                      .+... .......|+||||++++|.+.+...   .+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.+
T Consensus        77 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~-~~~~  151 (353)
T 2b9h_A           77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINS-NCDL  151 (353)
T ss_dssp             ECCCSCSTTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT-TCCE
T ss_pred             eecccccCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcC-CCcE
Confidence            65411 1134679999999999998888764   499999999999999999999999 9999999999999954 4899


Q ss_pred             EEEeccchhHhhhCCC----------CCCcccCCCCccchhhhhh
Q psy16752        219 KTLALNATELAATGHK----------LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~----------~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|+|||++........          .....+||+.|+|||++.+
T Consensus       152 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (353)
T 2b9h_A          152 KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT  196 (353)
T ss_dssp             EECCCTTCEECC----------------CCCCCCGGGCCHHHHHS
T ss_pred             EEEecccccccccccccccCccccccchhhccccccccCCeeecc
Confidence            9999999875432211          1224578999999998854

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.94  E-value=4.1e-27  Score=202.31  Aligned_cols=164  Identities=18%  Similarity=0.293  Sum_probs=131.6

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhh-hcCCCCCcccchhccccccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~  141 (284)
                      +.++|++.+.||+|+||+||+|.++     .++|....      ....+.+|+..+..+ .|        +||+++++.+
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h--------~~iv~~~~~~   80 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH--------SHVVRYFSAW   80 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSC--------TTBCCEEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCC--------CCeeeeeeee
Confidence            4467999999999999999999763     35554322      234567788888887 56        7799999987


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee-----
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV-----  213 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~-----  213 (284)
                      .    ....+++||||+ +++|.+.+....  ...+++..+..++.||+.||.|||++ ||+||||||+|||++.     
T Consensus        81 ~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~  155 (289)
T 1x8b_A           81 A----EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPN  155 (289)
T ss_dssp             E----ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC------
T ss_pred             e----cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCc
Confidence            6    677899999999 668888887642  13589999999999999999999999 9999999999999963     


Q ss_pred             -------------CCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        214 -------------DEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 -------------~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                                   +...++++|||.+......    ....||+.|+|||++.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~  205 (289)
T 1x8b_A          156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQEN  205 (289)
T ss_dssp             --------------CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTC
T ss_pred             ccccccccccccCCceEEEEcccccccccCCc----cccCCCccccChhHhcCC
Confidence                         3347999999988765443    244699999999999765

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.94  E-value=6.5e-27  Score=216.32  Aligned_cols=169  Identities=20%  Similarity=0.317  Sum_probs=133.2

Q ss_pred             eeccceEEEEEecccCceeEEEecc-----eeEEEec--CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVS--PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+.++|++.+.||+|+||.||+|.+     .+++|+.  ......+.+|+.+++.+.+.       .++..+....    
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~-------~~i~~i~~~~----   72 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGG-------TGIPNVRWFG----   72 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTS-------TTCCCEEEEE----
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCC-------CCCCeEEEEE----
Confidence            4557899999999999999999975     2355542  34456789999999999883       2233332222    


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe--eCCCcEEEEec
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC--VDEARVKTLAL  223 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~--~~~~~v~l~Df  223 (284)
                      ......||||||++++|.+++.... ..+++..++.++.||+.||.|||++ |||||||||+||||.  .+.+.++|+||
T Consensus        73 ~~~~~~~lvme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DF  150 (483)
T 3sv0_A           73 VEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDF  150 (483)
T ss_dssp             EETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred             eeCCEEEEEEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeC
Confidence            2677889999999999999887543 3599999999999999999999999 999999999999995  34589999999


Q ss_pred             cchhHhhhCCCC-------CCcccCCCCccchhhhhhc
Q psy16752        224 NATELAATGHKL-------PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       224 g~a~~~~~~~~~-------~~~~~gt~~~~aPE~l~~~  254 (284)
                      |++.........       ....+||+.|+|||++.+.
T Consensus       151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~  188 (483)
T 3sv0_A          151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGI  188 (483)
T ss_dssp             TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC
T ss_pred             CcceeccCCccccccccccccccCCCccccCHHHhcCC
Confidence            998865543321       2267899999999998653

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.94  E-value=5.9e-27  Score=208.63  Aligned_cols=170  Identities=21%  Similarity=0.337  Sum_probs=136.5

Q ss_pred             ccccceeccceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         68 VKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        68 ~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      ..++.+..++|++.+.||+|+||+||+|.++     .++++....     ...+.+|+.+++.++|        +||+++
T Consensus        25 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~   96 (360)
T 3eqc_A           25 QKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS--------PYIVGF   96 (360)
T ss_dssp             HTCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCC--------TTBCCE
T ss_pred             hcccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCC--------CCEEEE
Confidence            4456777789999999999999999999874     344443222     2456789999999887        679999


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~  216 (284)
                      ++++.    ....+|+||||+ +++|.+.+....  .+++..+..++.|++.||.|||++.||+||||||+|||++.+ +
T Consensus        97 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~-~  169 (360)
T 3eqc_A           97 YGAFY----SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR-G  169 (360)
T ss_dssp             EEEEE----ETTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT-C
T ss_pred             eEEEE----ECCEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCC-C
Confidence            99876    677899999999 668888887654  499999999999999999999983289999999999999554 8


Q ss_pred             cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++|+|||++......  ......||+.|+|||++.+.
T Consensus       170 ~~kl~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~  205 (360)
T 3eqc_A          170 EIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGT  205 (360)
T ss_dssp             CEEECCCCCCHHHHHH--C----CCCCTTCCHHHHTTC
T ss_pred             CEEEEECCCCcccccc--cccCCCCCCCeECHHHHcCC
Confidence            9999999998766443  23356899999999998764

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.94  E-value=7.3e-27  Score=204.96  Aligned_cols=169  Identities=22%  Similarity=0.271  Sum_probs=129.0

Q ss_pred             ccceEEEEEecccCceeEEEecc-----eeEEEec---CCCChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEec
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVS---PQFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~---~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .++|++.+.||+|+||.||+|.+     ..++|+.   ......+.+|+.+++.+ .|        +||+++++.+....
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h--------~~i~~~~~~~~~~~   94 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--------RNIATYYGAFIKKN   94 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCS--------TTBCCEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCC--------CCeeeeeeEEeecc
Confidence            35799999999999999999986     2345543   23456788999999998 55        77999998876322


Q ss_pred             c--CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        146 V--NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       146 ~--~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                      .  ....+|+||||+ +++|.+++.......+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~-~~~~kl~D  172 (326)
T 2x7f_A           95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTE-NAEVKLVD  172 (326)
T ss_dssp             --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECT-TCCEEECC
T ss_pred             CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcC-CCCEEEee
Confidence            1  256899999999 56888888765444699999999999999999999999 9999999999999954 58999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++..............||+.|+|||++..
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  203 (326)
T 2x7f_A          173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC  203 (326)
T ss_dssp             CTTTC-------------CCGGGCCHHHHC-
T ss_pred             CcCceecCcCccccccccCCccccChhhhcc
Confidence            9998876554444456689999999999863

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=1.2e-26  Score=202.29  Aligned_cols=170  Identities=23%  Similarity=0.348  Sum_probs=122.3

Q ss_pred             cceeccceEEEEEecccCceeEEEecc-----eeEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +....++|++.+.||+|+||.||+|.+     ..++|....       ....+.+|+.+++.++|        ++|++++
T Consensus        27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~   98 (310)
T 2wqm_A           27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH--------PNVIKYY   98 (310)
T ss_dssp             TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCC--------TTBCCEE
T ss_pred             ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCC--------CCEeeEE
Confidence            333445799999999999999999975     235554332       12456789999999987        6799998


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      +.+.    ....+++||||+ +++|.+.+...  ....+++..+..++.||+.||.|||+. ||+||||||+||+++. +
T Consensus        99 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~-~  172 (310)
T 2wqm_A           99 ASFI----EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITA-T  172 (310)
T ss_dssp             EEEE----ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECT-T
T ss_pred             EEEE----cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcC-C
Confidence            8776    677899999999 55887777642  234589999999999999999999999 9999999999999954 4


Q ss_pred             CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        216 ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.++|+|||++..............||+.|+|||++.+.
T Consensus       173 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  211 (310)
T 2wqm_A          173 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN  211 (310)
T ss_dssp             SCEEECCC------------------CCSSCCHHHHTTC
T ss_pred             CCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCC
Confidence            899999999988766554444566899999999998654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.94  E-value=1.1e-26  Score=207.57  Aligned_cols=166  Identities=22%  Similarity=0.378  Sum_probs=135.5

Q ss_pred             ceeccceEEEEEecccCceeEEEecce-----eEEEecCCC------------ChhhHHHHHHHHhh-hcCCCCCcccch
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------------PETALDEIKLLKCV-RDGDVNDPYRER  133 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------------~~~~~~E~~~l~~l-~~~~~~~~~~~~  133 (284)
                      ..+.++|++.+.||+|+||.||+|.++     +++|+....            .+.+.+|+.+++.+ .|        ++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--------p~  161 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH--------PH  161 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTC--------TT
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCC--------CC
Confidence            344568999999999999999999763     355543222            24567899999998 56        67


Q ss_pred             hccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe
Q psy16752        134 VVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC  212 (284)
Q Consensus       134 i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~  212 (284)
                      |+.+++.+.    .....|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+. ||+||||||+|||++
T Consensus       162 iv~~~~~~~----~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~  234 (365)
T 2y7j_A          162 IITLIDSYE----SSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLD  234 (365)
T ss_dssp             BCCEEEEEE----BSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC
T ss_pred             EeEEEEEEe----eCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEC
Confidence            999988776    678899999999 668888876653  499999999999999999999999 999999999999995


Q ss_pred             eCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        213 VDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       213 ~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      . ++.++++|||++...... ......+||+.|+|||++.+.
T Consensus       235 ~-~~~ikl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~  274 (365)
T 2y7j_A          235 D-NMQIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCS  274 (365)
T ss_dssp             T-TCCEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHT
T ss_pred             C-CCCEEEEecCcccccCCC-cccccCCCCCCccChhhcccc
Confidence            4 489999999988765543 233457899999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.94  E-value=1.6e-26  Score=212.24  Aligned_cols=164  Identities=16%  Similarity=0.203  Sum_probs=131.5

Q ss_pred             ccceEEEEEecccCceeEEEecce---eEEEecC--CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSP--QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .++|++.+.||+|+||.||+|.++   +++|+..  ...+.+.+|+.+++.++|        +||+++++.+.   ....
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~~---~~~~  260 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH--------SNLVQLLGVIV---EEKG  260 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCC--------TTBCCEEEEEE---CTTS
T ss_pred             hHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccC--------CCEEEEEEEEE---cCCC
Confidence            467999999999999999999763   3555433  245678999999999988        67999988654   1344


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+|+||||+ +|+|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||++. ++.++|+|||++..
T Consensus       261 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~  338 (450)
T 1k9a_A          261 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSE-DNVAKVSDFGLTKE  338 (450)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECC-CCCEEEeeCCCccc
Confidence            799999999 67999988876544579999999999999999999999 9999999999999954 48999999999874


Q ss_pred             hhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        229 AATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       229 ~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ....   .....+++.|+|||++.+.
T Consensus       339 ~~~~---~~~~~~~~~y~aPE~~~~~  361 (450)
T 1k9a_A          339 ASST---QDTGKLPVKWTAPEALREK  361 (450)
T ss_dssp             CC---------CCCTTTSCHHHHHSS
T ss_pred             cccc---ccCCCCCcceeCHHHhcCC
Confidence            3322   2234678899999998653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.94  E-value=3.2e-27  Score=212.03  Aligned_cols=164  Identities=17%  Similarity=0.262  Sum_probs=131.1

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|.+.+.||+|+||+||+|.++     +++|.....     ...+.+|+.+++.++|        +||+++++.+.  
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~--  182 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH--------PNIVRLIGVCT--  182 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCC--------TTBCCEEEEEC--
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCC--------CCEEEEEEEEe--
Confidence            457999999999999999999873     355554332     2457789999999988        67999998775  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+||
T Consensus       183 --~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~-~~~~kl~Df  257 (377)
T 3cbl_A          183 --QKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTE-KNVLKISDF  257 (377)
T ss_dssp             --SSSSCEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TCCEEECCG
T ss_pred             --cCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcC-CCcEEECcC
Confidence              677899999999 678888887643 3489999999999999999999999 9999999999999954 489999999


Q ss_pred             cchhHhhhCCCC--CCcccCCCCccchhhhhh
Q psy16752        224 NATELAATGHKL--PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       224 g~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~  253 (284)
                      |++.........  .....+++.|+|||++.+
T Consensus       258 G~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  289 (377)
T 3cbl_A          258 GMSREEADGVYAASGGLRQVPVKWTAPEALNY  289 (377)
T ss_dssp             GGCEECTTSEEECCSSCCEEEGGGSCHHHHHH
T ss_pred             CCceecCCCceeecCCCCCCCcCcCCHhHhcc
Confidence            998754332111  112335677999998864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.94  E-value=9.6e-27  Score=208.42  Aligned_cols=181  Identities=21%  Similarity=0.311  Sum_probs=132.7

Q ss_pred             CCcCCCCCCcccccccc---eeccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhh
Q psy16752         56 DPNDYCKGGYHPVKIGM---LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCV  121 (284)
Q Consensus        56 ~~~~~~~~~~~~~~~~~---~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l  121 (284)
                      +.......+++...++.   .+.++|.+.+.||+|+||+||+|.++     +++|+....      ...+.+|+.+++.+
T Consensus        19 ~m~~~~~~g~~~~~~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l   98 (371)
T 4exu_A           19 SMSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM   98 (371)
T ss_dssp             --CCSSCTTEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC
T ss_pred             ceeeeccccceeeeeccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc
Confidence            33334444444444432   24568999999999999999999762     355544321      24567899999999


Q ss_pred             hcCCCCCcccchhccccccceEecc--CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCc
Q psy16752        122 RDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRI  199 (284)
Q Consensus       122 ~~~~~~~~~~~~i~~l~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~gi  199 (284)
                      +|        +||+++++.+.....  ....+|+||||++++|.+.+.    ..+++..+..++.||+.||.|||++ ||
T Consensus        99 ~h--------~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~-~i  165 (371)
T 4exu_A           99 QH--------ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA-GV  165 (371)
T ss_dssp             CC--------TTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             CC--------CCchhhhhheeccCCcccceeEEEEEccccccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            88        669999887752111  112349999999988877662    2489999999999999999999999 99


Q ss_pred             EecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        200 IHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       200 vHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +||||||+|||++. ++.++|+|||++......   ....+||+.|+|||++.+
T Consensus       166 vH~Dikp~NIll~~-~~~~kL~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~  215 (371)
T 4exu_A          166 VHRDLKPGNLAVNE-DCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILS  215 (371)
T ss_dssp             CCSCCCGGGEEECT-TCCEEECSTTCC-----------CTTCCCTTSCHHHHSC
T ss_pred             cCCCcCHHHeEECC-CCCEEEEecCcccccccC---cCCcccCccccCHHHhcC
Confidence            99999999999954 489999999998765432   335678999999999876

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.94  E-value=3.5e-27  Score=211.55  Aligned_cols=165  Identities=15%  Similarity=0.183  Sum_probs=122.4

Q ss_pred             ccceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ..+|.+.+.||+|+||+||+|.++        +++|.....     .+.+.+|+.+++.++|        +||+++++++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~niv~~~~~~  115 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH--------PNIIRLEGVV  115 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEE
Confidence            357999999999999999999764        455554332     2457789999999987        6799999877


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    ....+|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|
T Consensus       116 ~----~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~-~~~~kl  188 (373)
T 2qol_A          116 T----KSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKV  188 (373)
T ss_dssp             C----SSSSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT-TCCEEE
T ss_pred             e----eCCceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcC-CCCEEE
Confidence            6    677899999999 678888776543 3599999999999999999999999 9999999999999954 489999


Q ss_pred             EeccchhHhhhCCCCCC---cccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPV---SFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~---~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++...........   ...+|+.|+|||++.+.
T Consensus       189 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  225 (373)
T 2qol_A          189 SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR  225 (373)
T ss_dssp             CCC----------------------CTTSCHHHHHHC
T ss_pred             CcCccccccccCCccceeccCCCcCCCccChhhhccC
Confidence            99999987654432221   23457789999998653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.94  E-value=1.5e-26  Score=198.17  Aligned_cols=168  Identities=25%  Similarity=0.394  Sum_probs=128.3

Q ss_pred             cceeccceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      |.+..++|++.+.||+|+||.||+|.++     .++|+..       .....+.+|+.+++.++|        ++|++++
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~   77 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH--------PHIIKLY   77 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC--------TTBCCEE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCC--------CCEeEEE
Confidence            4455578999999999999999999763     3444421       223467789999999987        6799998


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+.    .....|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.
T Consensus        78 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~-~~~  149 (276)
T 2h6d_A           78 QVIS----TPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDA-HMN  149 (276)
T ss_dssp             EEEE----CSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECT-TSC
T ss_pred             EEEe----cCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECC-CCC
Confidence            8776    778899999999 678888887654  489999999999999999999999 9999999999999954 479


Q ss_pred             EEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        218 VKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ++|+|||++...... .......||+.|+|||++.+..
T Consensus       150 ~~l~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~  186 (276)
T 2h6d_A          150 AKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRL  186 (276)
T ss_dssp             EEECCCCGGGCCCC--------------CCTGGGTTSC
T ss_pred             EEEeecccccccCCC-cceecccCCccccCHHHHcCCC
Confidence            999999998765433 2234567999999999997654

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.94  E-value=1e-26  Score=202.07  Aligned_cols=162  Identities=23%  Similarity=0.338  Sum_probs=133.0

Q ss_pred             cceEEEEEecccCceeEEEecc-----eeEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++.+.||+|+||.||+|.+     ..++|+..     ...+.+.+|+.+++.+.|        ++|+++++.+.   
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~---   90 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--------PYVTKYYGSYL---   90 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCC--------TTBCCEEEEEE---
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCC--------CCEeEEEEEEe---
Confidence            5699999999999999999975     23555432     223567889999999987        66999988776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+|+||||+ +++|.+.+..   ..+++..+..++.||+.||.|||+. ||+||||||+||+++. ++.++|+|||
T Consensus        91 -~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~-~~~~kl~Dfg  164 (303)
T 3a7i_A           91 -KDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSE-HGEVKLADFG  164 (303)
T ss_dssp             -ETTEEEEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TSCEEECCCT
T ss_pred             -cCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECC-CCCEEEeecc
Confidence             667899999999 5577766643   2499999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++..............||+.|+|||++.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  194 (303)
T 3a7i_A          165 VAGQLTDTQIKRNTFVGTPFWMAPEVIKQS  194 (303)
T ss_dssp             TCEECBTTBCCBCCCCSCGGGCCHHHHTTC
T ss_pred             cceecCccccccCccCCCcCccCHHHHhcC
Confidence            987665544444567899999999998654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.94  E-value=1e-26  Score=203.87  Aligned_cols=172  Identities=17%  Similarity=0.223  Sum_probs=121.0

Q ss_pred             eeccceEEEEEecccCceeEEEecce--------eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +..++|++.+.||+|+||+||+|.++        .++|+...      ..+.+.+|+.+++.++|        +||++++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~   91 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH--------PHVAKLV   91 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCC--------TTBCCCC
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCC--------Cceehhh
Confidence            33467999999999999999999763        34444322      13457889999999987        6799999


Q ss_pred             ccceEecc--CCeEEEEEeccC-CccHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        139 DDFKICGV--NGTHVCMVFEVL-GHNLLKLIVKSKY----RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       139 ~~~~~~~~--~~~~~~iv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      +.+.....  .....++||||+ +++|.+.+.....    ..+++..+..++.||+.||.|||++ ||+||||||+|||+
T Consensus        92 ~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dikp~NIli  170 (323)
T 3qup_A           92 GVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCML  170 (323)
T ss_dssp             EEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEE
T ss_pred             ceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCCcceEEE
Confidence            87752111  111249999999 6688888765431    1489999999999999999999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        212 CVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                      +. ++.++|+|||++.........  .....+++.|+|||++.+.
T Consensus       171 ~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  214 (323)
T 3qup_A          171 AE-DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADN  214 (323)
T ss_dssp             CT-TSCEEECCCCC-----------------CCGGGCCHHHHHHC
T ss_pred             cC-CCCEEEeeccccccccccccccccccccCcccccCchhhcCC
Confidence            54 489999999999866544322  2244578889999998664

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.94  E-value=4.7e-27  Score=215.83  Aligned_cols=167  Identities=20%  Similarity=0.271  Sum_probs=128.6

Q ss_pred             eeccceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +..++|++.+.||+|+||.||+|.++    +++|....   ..+.+.+|+.+++.++|        +||+++++.+.   
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~---  249 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--------EKLVQLYAVVS---  249 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC---
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCC--------CCEeeEEEEEc---
Confidence            33467999999999999999999863    35555432   23568899999999988        66999988654   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ...+|+||||+ +|+|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||++. ++.++|+|||
T Consensus       250 --~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~-~~~~kl~DfG  325 (452)
T 1fmk_A          250 --EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGE-NLVCKVADFG  325 (452)
T ss_dssp             --SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECG-GGCEEECCCC
T ss_pred             --CCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECC-CCCEEECCCc
Confidence              35689999999 67898888754434589999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++........ ......+++.|+|||++.+.
T Consensus       326 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  356 (452)
T 1fmk_A          326 LARLIEDNEYTARQGAKFPIKWTAPEAALYG  356 (452)
T ss_dssp             TTC--------------CCGGGSCHHHHHHC
T ss_pred             cceecCCCceecccCCcccccccCHhHHhcC
Confidence            9986654322 22244578889999988643

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=4.5e-27  Score=207.55  Aligned_cols=182  Identities=16%  Similarity=0.216  Sum_probs=142.5

Q ss_pred             CCCcccccccceeccceEEEEEecccCceeEEEecce---eEEEecC-CCChhhHHHHHHHHh--hhcCCCCCcccchhc
Q psy16752         62 KGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSP-QFPETALDEIKLLKC--VRDGDVNDPYRERVV  135 (284)
Q Consensus        62 ~~~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~-~~~~~~~~E~~~l~~--l~~~~~~~~~~~~i~  135 (284)
                      .....|+..+..+.++|++.+.||+|+||.||+|.+.   +++|+.. .....+.+|..++..  ++|        +||+
T Consensus        28 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h--------~ni~   99 (342)
T 1b6c_B           28 SGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH--------ENIL   99 (342)
T ss_dssp             CCSSSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCC--------TTBC
T ss_pred             CCCCCceeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCC--------CcEE
Confidence            3445667777888889999999999999999999863   3444432 233456788888887  455        7799


Q ss_pred             cccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCcEecCCCC
Q psy16752        136 QLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLH--------TKCRIIHTDIKP  206 (284)
Q Consensus       136 ~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~givHrDiKp  206 (284)
                      ++++.+.........+|+||||+ +++|.+++...   .+++..+..++.||+.||.|||        +. +|+||||||
T Consensus       100 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp  175 (342)
T 1b6c_B          100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKS  175 (342)
T ss_dssp             CEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCSG
T ss_pred             EEEeeecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CeeeCCCCH
Confidence            99887763222224899999999 56888888654   4899999999999999999999        88 999999999


Q ss_pred             CCeeEeeCCCcEEEEeccchhHhhhCCC----CCCcccCCCCccchhhhhhccc
Q psy16752        207 ENVLLCVDEARVKTLALNATELAATGHK----LPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       207 ~NIll~~~~~~v~l~Dfg~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      +|||++.+ +.++|+|||++........    ......||+.|+|||++.+...
T Consensus       176 ~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  228 (342)
T 1b6c_B          176 KNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN  228 (342)
T ss_dssp             GGEEECTT-SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCC
T ss_pred             HHEEECCC-CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhccccc
Confidence            99999554 7999999999876554432    2345679999999999977543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.94  E-value=7.9e-27  Score=199.42  Aligned_cols=161  Identities=20%  Similarity=0.291  Sum_probs=121.3

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCC--------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ--------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|+||.||+|.+.   .++|+...        ..+.+.+|+.+++.++|        +||+++++.+.  
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~--   76 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH--------PNIIALRGVCL--   76 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCC--------TTBCCEEEEEC--
T ss_pred             hheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCC--------CCEeeEEEEEe--
Confidence            57999999999999999999763   34554322        23567789999999988        67999998776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC---cEecCCCCCCeeEeeC------
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR---IIHTDIKPENVLLCVD------  214 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g---ivHrDiKp~NIll~~~------  214 (284)
                        .....|+||||+ +++|.+.+. .  ..+++..+..++.|++.||.|||++ |   |+||||||+|||++.+      
T Consensus        77 --~~~~~~lv~e~~~~~~L~~~~~-~--~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~  150 (271)
T 3dtc_A           77 --KEPNLCLVMEFARGGPLNRVLS-G--KRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDL  150 (271)
T ss_dssp             --CC--CEEEEECCTTEEHHHHHT-S--SCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCC
T ss_pred             --cCCceEEEEEcCCCCCHHHHhh-c--CCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccc
Confidence              677899999999 566655553 2  3599999999999999999999999 8   8999999999999652      


Q ss_pred             -CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        215 -EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 -~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                       .+.++|+|||++.......  .....||+.|+|||++.+.
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~  189 (271)
T 3dtc_A          151 SNKILKITDFGLAREWHRTT--KMSAAGAYAWMAPEVIRAS  189 (271)
T ss_dssp             SSCCEEECCCCC---------------CCGGGSCHHHHHHC
T ss_pred             cCcceEEccCCccccccccc--ccCCCCccceeCHHHhccC
Confidence             5789999999987655432  2355799999999998654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.94  E-value=1.8e-26  Score=198.91  Aligned_cols=164  Identities=15%  Similarity=0.196  Sum_probs=130.2

Q ss_pred             ccceeccceEEEEEecccCceeEEEecce-----eEEEecCCC-----------ChhhHHHHHHHHhhhcCCCCCcccch
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----------PETALDEIKLLKCVRDGDVNDPYRER  133 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----------~~~~~~E~~~l~~l~~~~~~~~~~~~  133 (284)
                      .+.+..++|++.+.||+|+||+||+|.+.     .++|+....           .+.+.+|+.+++.++|        +|
T Consensus        13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~   84 (287)
T 4f0f_A           13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH--------PN   84 (287)
T ss_dssp             CCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCC--------TT
T ss_pred             hhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCC--------CC
Confidence            34455678999999999999999999762     355543211           1567889999999987        67


Q ss_pred             hccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCee
Q psy16752        134 VVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVL  210 (284)
Q Consensus       134 i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIl  210 (284)
                      |+++++.+.    ...  ++||||+ +++|.+.+.... ..+++..+..++.|++.||.|||++ |  |+||||||+|||
T Consensus        85 i~~~~~~~~----~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil  156 (287)
T 4f0f_A           85 IVKLYGLMH----NPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIF  156 (287)
T ss_dssp             BCCEEEEET----TTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEE
T ss_pred             chhhheeec----CCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEE
Confidence            999988764    333  6999999 578888876654 4599999999999999999999999 9  999999999999


Q ss_pred             EeeCCC----cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        211 LCVDEA----RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       211 l~~~~~----~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      ++.++.    .++|+|||++.....   ......||+.|+|||++.
T Consensus       157 ~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~  199 (287)
T 4f0f_A          157 LQSLDENAPVCAKVADFGLSQQSVH---SVSGLLGNFQWMAPETIG  199 (287)
T ss_dssp             ESCCCTTCSCCEEECCCTTCBCCSS---CEECCCCCCTTSCGGGSS
T ss_pred             EeccCCCCceeEEeCCCCccccccc---cccccCCCccccCchhhc
Confidence            965422    399999999863322   233567999999999984

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.94  E-value=3.3e-27  Score=211.27  Aligned_cols=163  Identities=25%  Similarity=0.377  Sum_probs=114.6

Q ss_pred             ccceEEEEEecccCceeEEEecc-----eeEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++++.||+|+||.||+|.+     .+++|.....      ...+.+|+.+++.++|        +||+++++.+..
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pnIv~~~~~~~~   99 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH--------ENVIGLLDVFTP   99 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCC--------TTBCCCSEEECS
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC--------CCCCcEEEEEec
Confidence            46899999999999999999975     2355554321      2456789999999988        668888887642


Q ss_pred             ec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ..  .....+|+|||+++++|.+.+...   .+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.++|+
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~-~~~~kL~  174 (367)
T 2fst_X          100 ARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKIL  174 (367)
T ss_dssp             CSSGGGCCCCEEEEECCCEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECT-TCCEEEC
T ss_pred             CCccccCCeEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECC-CCCEEEe
Confidence            11  123568999999998888877653   499999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++......   ....+||+.|+|||++.+
T Consensus       175 DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~  203 (367)
T 2fst_X          175 DFGLARHTADE---MTGYVATRWYRAPEIMLN  203 (367)
T ss_dssp             C------------------CCCTTCCHHHHTT
T ss_pred             ecccccccccc---CCCcCcCcCccChHHHcC
Confidence            99998765432   335679999999999876

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=2.6e-27  Score=209.41  Aligned_cols=166  Identities=21%  Similarity=0.323  Sum_probs=128.7

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC---------CCChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP---------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .++|++.+.||+|+||+||+|.++     .++|+..         ...+.+.+|+.+++.++|        +||++++++
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~   96 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH--------PNIARLYEV   96 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCC--------TTBCCEEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCC--------CCcceeehh
Confidence            357999999999999999999762     3455421         223567889999999987        779999998


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------------------------------CCCCCHHHHHH
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------------------------------YRGIPLENVRS  181 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------------------------------~~~~~~~~~~~  181 (284)
                      +.    ....+|+||||+ +++|.+.+....                                      ...+++..+..
T Consensus        97 ~~----~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (345)
T 3hko_A           97 YE----DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN  172 (345)
T ss_dssp             EE----CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHH
T ss_pred             hc----cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence            87    788999999999 778877764210                                      01136778899


Q ss_pred             HHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC-CcEEEEeccchhHhhhCCC----CCCcccCCCCccchhhhhh
Q psy16752        182 IIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE-ARVKTLALNATELAATGHK----LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       182 i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~-~~v~l~Dfg~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++.||+.||.|||++ ||+||||||+|||++.+. ..++|+|||++........    ......||+.|+|||++.+
T Consensus       173 i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  248 (345)
T 3hko_A          173 IMRQIFSALHYLHNQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT  248 (345)
T ss_dssp             HHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC
T ss_pred             HHHHHHHHHHHHHHC-CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc
Confidence            999999999999999 999999999999996553 2899999999876543221    2346679999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.94  E-value=1.7e-26  Score=203.70  Aligned_cols=166  Identities=16%  Similarity=0.238  Sum_probs=132.2

Q ss_pred             ccceEEEEEecccCceeEEEecce------------eEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhcc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK------------TQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQ  136 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~------------~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~  136 (284)
                      .++|++.+.||+|+||+||+|.+.            .++|+....     ...+.+|+.+++.+ .|        +||++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------p~iv~  105 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--------KNIIN  105 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCC--------TTBCC
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcC--------CCEee
Confidence            357999999999999999999752            455554332     23467899999999 66        77999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEe
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------------RGIPLENVRSIIRQILQGLNYLHTKCRIIH  201 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~givH  201 (284)
                      +++++.    ....+|+||||+ +++|.+++.....              ..+++..+..++.||+.||.|||+. ||+|
T Consensus       106 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH  180 (334)
T 2pvf_A          106 LLGACT----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIH  180 (334)
T ss_dssp             EEEEEC----SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEEC
T ss_pred             EEEEEc----cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeC
Confidence            998776    677899999999 6688888876431              2389999999999999999999999 9999


Q ss_pred             cCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        202 TDIKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       202 rDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||||+|||++. ++.++|+|||++........  ......+|+.|+|||++.+.
T Consensus       181 ~Dlkp~NIll~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  234 (334)
T 2pvf_A          181 RDLAARNVLVTE-NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR  234 (334)
T ss_dssp             SCCSGGGEEECT-TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHC
T ss_pred             CCCccceEEEcC-CCCEEEccccccccccccccccccCCCCcccceeChHHhcCC
Confidence            999999999954 48999999999876544322  12244578889999988653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.94  E-value=3e-27  Score=217.22  Aligned_cols=166  Identities=17%  Similarity=0.294  Sum_probs=132.2

Q ss_pred             eeccceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +..++|++.+.||+|+||+||+|.++    +++|....   ..+.+.+|+.+++.++|        +||+++++.+.   
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~l~~~~~---  253 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH--------DKLVKLHAVVT---  253 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCC--------TTBCCEEEEEC---
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCC--------CCEeeEEEEEe---
Confidence            33467999999999999999999763    35554332   34568899999999988        66999887653   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ...+|+||||+ +|+|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||++. ++.++|+|||
T Consensus       254 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~-~~~~kl~DFG  329 (454)
T 1qcf_A          254 --KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSA-SLVCKIADFG  329 (454)
T ss_dssp             --SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECT-TCCEEECSTT
T ss_pred             --CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECC-CCcEEEeeCC
Confidence              45689999999 77898888754333589999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCC-CCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGH-KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~-~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ++....... .......+|+.|+|||++..
T Consensus       330 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~  359 (454)
T 1qcf_A          330 LARVIEDNEYTAREGAKFPIKWTAPEAINF  359 (454)
T ss_dssp             GGGGBCCHHHHTTCSSSSCGGGSCHHHHHH
T ss_pred             CceEcCCCceeccCCCcccccccCHHHhcc
Confidence            997653221 11224456788999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.94  E-value=5.4e-27  Score=203.80  Aligned_cols=167  Identities=23%  Similarity=0.293  Sum_probs=132.9

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC--------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP--------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .++|++.+.||+|+||.||+|.+.     .++++..        .....+.+|+.+++.++|        +||+++++.+
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~   75 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH--------KNVIQLVDVL   75 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCC--------TTBCCEEEEE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCC--------CCeeEEEEEE
Confidence            457999999999999999999872     3555432        223567889999999987        6699888876


Q ss_pred             eEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        142 KICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      .  ......+|+||||+.+++.+.+.......+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.++|+
T Consensus        76 ~--~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~-~~~~kl~  151 (305)
T 2wtk_C           76 Y--NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTT-GGTLKIS  151 (305)
T ss_dssp             E--CC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TCCEEEC
T ss_pred             E--cCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcC-CCcEEee
Confidence            3  2255679999999988888888776556799999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCC--CCCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGH--KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++.......  .......||+.|+|||++.+
T Consensus       152 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  185 (305)
T 2wtk_C          152 ALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG  185 (305)
T ss_dssp             CCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTC
T ss_pred             ccccccccCccccccccccCCCCCCCcChhhccC
Confidence            999987654321  22235679999999999875

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=7.6e-27  Score=203.98  Aligned_cols=165  Identities=21%  Similarity=0.320  Sum_probs=127.7

Q ss_pred             eccceEEE-EEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhh-hcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVT-RKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~-~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +.++|++. +.||+|+||+||+|.+.     +++|+...    ....+.+|+.++.++ .|        +||+++++.+.
T Consensus        10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h--------~~i~~~~~~~~   81 (316)
T 2ac3_A           10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH--------RNVLELIEFFE   81 (316)
T ss_dssp             TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCC--------TTBCCEEEEEE
T ss_pred             cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCC--------CCeeeEEEEEe
Confidence            44579996 78999999999999762     35554322    235678899999885 45        77999999877


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC--cEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA--RVK  219 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~--~v~  219 (284)
                          ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.++.  .++
T Consensus        82 ----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~k  154 (316)
T 2ac3_A           82 ----EEDRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVK  154 (316)
T ss_dssp             ----ETTEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEE
T ss_pred             ----eCCEEEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceE
Confidence                677899999999 678888887654  589999999999999999999999 9999999999999965532  499


Q ss_pred             EEeccchhHhhhCC-------CCCCcccCCCCccchhhhhh
Q psy16752        220 TLALNATELAATGH-------KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       220 l~Dfg~a~~~~~~~-------~~~~~~~gt~~~~aPE~l~~  253 (284)
                      |+|||++.......       ......+||+.|+|||++.+
T Consensus       155 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  195 (316)
T 2ac3_A          155 ICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA  195 (316)
T ss_dssp             ECCTTCCC-------------------CCSGGGCCHHHHHH
T ss_pred             EEEccCccccccCCccccccccccccccCCcCccChHHhhc
Confidence            99999987543221       11224579999999999865

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=1.6e-26  Score=202.54  Aligned_cols=167  Identities=23%  Similarity=0.283  Sum_probs=130.5

Q ss_pred             eeccce-EEEEEecccCceeEEEecc---------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccc
Q psy16752         73 LFNNRY-RVTRKLGWGHFSTVWFTGS---------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQL  137 (284)
Q Consensus        73 ~~~~~y-~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l  137 (284)
                      ++.++| ++++.||+|+||+||++..         .+++|+....     ...+.+|+.+++.++|        +||+++
T Consensus        27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~   98 (318)
T 3lxp_A           27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH--------EHIIKY   98 (318)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC--------TTBCCE
T ss_pred             eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCC--------cchhhE
Confidence            345566 9999999999999987743         2355554332     2447889999999988        679999


Q ss_pred             cccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC
Q psy16752        138 LDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       138 ~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~  216 (284)
                      ++++..  .....+++||||+ +++|.+.+...   .+++..+..++.||+.||.|||+. ||+||||||+|||++. ++
T Consensus        99 ~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Nil~~~-~~  171 (318)
T 3lxp_A           99 KGCCED--AGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDN-DR  171 (318)
T ss_dssp             EEEEEE--TTTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TC
T ss_pred             EEEEec--CCCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEcC-CC
Confidence            887752  2357899999999 56777777554   399999999999999999999999 9999999999999954 48


Q ss_pred             cEEEEeccchhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++|+|||++........   ......+|+.|+|||++.+.
T Consensus       172 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  212 (318)
T 3lxp_A          172 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY  212 (318)
T ss_dssp             CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHC
T ss_pred             CEEECCccccccccccccccccccCCCCCceeeChHHhcCC
Confidence            999999999886654432   22345688889999998653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.94  E-value=1.5e-26  Score=198.90  Aligned_cols=164  Identities=16%  Similarity=0.183  Sum_probs=128.1

Q ss_pred             ccceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .++|.+.+.||+|+||+||+|.+.        .++|.....     .+.+.+|+.+++.++|        +||+++++.+
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~   82 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH--------PHIVKLIGII   82 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCC--------TTBCCEEEEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCC--------CCcceEEEEE
Confidence            357999999999999999999742        355554332     3457789999999988        6699988876


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .     ....|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.+ +.++|
T Consensus        83 ~-----~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~-~~~kl  154 (281)
T 3cc6_A           83 E-----EEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASP-ECVKL  154 (281)
T ss_dssp             C-----SSSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEET-TEEEE
T ss_pred             c-----CCCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCC-CcEEe
Confidence            4     34568999999 578888776654 3589999999999999999999999 99999999999999665 79999


Q ss_pred             EeccchhHhhhCCCC-CCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKL-PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~-~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++......... .....+|+.|+|||++.+.
T Consensus       155 ~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  189 (281)
T 3cc6_A          155 GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR  189 (281)
T ss_dssp             CCCCGGGCC---------CCCCCGGGCCHHHHHHC
T ss_pred             CccCCCcccccccccccccCCCCcceeCchhhccC
Confidence            999998765543222 2345678899999998643

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.94  E-value=2.8e-26  Score=197.51  Aligned_cols=162  Identities=20%  Similarity=0.360  Sum_probs=133.6

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEec-------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++.+.||+|+||.||+|.+.     .++++.       ......+.+|+.+++.++|        ++|+++++.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~   84 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH--------PNILRMYNYFH   84 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC--------TTBCCEEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCC--------CCEeeEEEEEE
Confidence            357999999999999999999763     344443       1223567889999999987        67999998876


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.++|+
T Consensus        85 ----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~-~~~~kl~  156 (284)
T 2vgo_A           85 ----DRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGY-KGELKIA  156 (284)
T ss_dssp             ----CSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECT-TCCEEEC
T ss_pred             ----cCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcC-CCCEEEe
Confidence                778899999999 668888887654  489999999999999999999999 9999999999999954 4799999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++......  ......||+.|+|||++.+.
T Consensus       157 Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  187 (284)
T 2vgo_A          157 DFGWSVHAPSL--RRRTMCGTLDYLPPEMIEGK  187 (284)
T ss_dssp             CCTTCEECSSS--CBCCCCSCGGGCCHHHHTTC
T ss_pred             cccccccCccc--ccccccCCCCcCCHHHhccC
Confidence            99988644332  23456799999999998764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.94  E-value=3e-26  Score=200.97  Aligned_cols=172  Identities=22%  Similarity=0.399  Sum_probs=135.3

Q ss_pred             ccceEEEEEecccCceeEEEecce------eEEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK------TQVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++.+.||+|+||.||+|.+.      +++|+.      ......+.+|+.+++.+....     |+||+++++.+.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-----h~~i~~~~~~~~   84 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE-----HPNVVRLFDVCT   84 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTC-----CTTBCCEEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccC-----CCCeEeeeeeee
Confidence            357999999999999999999762      244432      122346778999988884211     277999988765


Q ss_pred             Eec-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICG-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ... .....+++||||++++|.+.+.......+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.++|+
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~-~~~~kl~  162 (326)
T 1blx_A           85 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTS-SGQIKLA  162 (326)
T ss_dssp             EEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECT-TCCEEEC
T ss_pred             ecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcC-CCCEEEe
Confidence            322 256789999999999999998876555699999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++....... ......||+.|+|||++.+.
T Consensus       163 Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  194 (326)
T 1blx_A          163 DFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQS  194 (326)
T ss_dssp             SCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTC
T ss_pred             cCcccccccCCC-CccccccccceeCHHHHhcC
Confidence            999987554321 23356799999999998654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.94  E-value=1.3e-26  Score=199.85  Aligned_cols=164  Identities=20%  Similarity=0.203  Sum_probs=116.8

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCCC-----hh-hHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFP-----ET-ALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~-----~~-~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++.+.||+|+||+||+|.+.     .++|......     .. +..+...++.+.|        ++|+++++++. 
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h--------~~iv~~~~~~~-   76 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC--------PFTVTFYGALF-   76 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEE-
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCC--------CeEEEEeeeee-
Confidence            457999999999999999999872     3555433221     11 1222223444554        77999999876 


Q ss_pred             eccCCeEEEEEeccCCccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CGVNGTHVCMVFEVLGHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                         .....|+||||+++++.+.+...  ....+++..+..++.||+.||.|||+++||+||||||+||+++. .+.++|+
T Consensus        77 ---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~-~~~~kl~  152 (290)
T 3fme_A           77 ---REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMC  152 (290)
T ss_dssp             ---CSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECT-TCCEEBC
T ss_pred             ---ccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC-CCCEEEe
Confidence               67789999999998888777542  23469999999999999999999998448999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |||++...... .......||+.|+|||++.
T Consensus       153 Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~  182 (290)
T 3fme_A          153 DFGISGYLVDD-VAKDIDAGCKPYMAPERIN  182 (290)
T ss_dssp             CC----------------CCCCCCSCHHHHS
T ss_pred             ecCCccccccc-ccccccCCCccccChhhcC
Confidence            99998766543 2233457999999999974

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.94  E-value=6.5e-27  Score=200.89  Aligned_cols=164  Identities=18%  Similarity=0.320  Sum_probs=130.7

Q ss_pred             ccceEEEEEecccCceeEEEecc----eeEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS----KTQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      .++|++.+.||+|+||.||+|.+    ..++|....   ..+.+.+|+.+++.+.|        ++|+++++.+.     
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~-----   78 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH--------QRLVRLYAVVT-----   78 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC-----
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCC--------cCcceEEEEEc-----
Confidence            35799999999999999999975    234454332   34567899999999988        66888887653     


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ....++||||+ +++|.+.+.......+++..+..++.||+.||.|||++ ||+||||||+||+++ +++.++|+|||++
T Consensus        79 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~-~~~~~kl~Dfg~~  156 (279)
T 1qpc_A           79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVS-DTLSCKIADFGLA  156 (279)
T ss_dssp             SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC-TTSCEEECCCTTC
T ss_pred             CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEc-CCCCEEECCCccc
Confidence            44589999999 67888887654323489999999999999999999999 999999999999995 4589999999998


Q ss_pred             hHhhhCCC-CCCcccCCCCccchhhhhh
Q psy16752        227 ELAATGHK-LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       227 ~~~~~~~~-~~~~~~gt~~~~aPE~l~~  253 (284)
                      ........ ......+++.|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  184 (279)
T 1qpc_A          157 RLIEDNEYTAREGAKFPIKWTAPEAINY  184 (279)
T ss_dssp             EECSSSCEECCTTCCCCTTTSCHHHHHH
T ss_pred             ccccCcccccccCCCCccCccChhhhcc
Confidence            76544322 2234567889999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.94  E-value=4.2e-26  Score=197.51  Aligned_cols=164  Identities=24%  Similarity=0.365  Sum_probs=134.4

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCCC-------------ChhhHHHHHHHHhhh-cCCCCCcccchh
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------------PETALDEIKLLKCVR-DGDVNDPYRERV  134 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------------~~~~~~E~~~l~~l~-~~~~~~~~~~~i  134 (284)
                      +.++|++.+.||+|+||.||+|.++     +++|+....             .+.+.+|+.+++.+. |        ++|
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h--------~~i   86 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH--------PNI   86 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC--------TTB
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCC--------CCE
Confidence            3467999999999999999999863     355543221             245678999999996 6        779


Q ss_pred             ccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        135 VQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       135 ~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      +++++.+.    .....++||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+||+++.
T Consensus        87 ~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~  159 (298)
T 1phk_A           87 IQLKDTYE----TNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDD  159 (298)
T ss_dssp             CCEEEEEE----CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT
T ss_pred             eeeeeeec----cCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcC
Confidence            99998876    778999999999 578888887653  599999999999999999999999 9999999999999954


Q ss_pred             CCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        214 DEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                       ++.++|+|||++...... .......||+.|+|||++.+.
T Consensus       160 -~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  198 (298)
T 1phk_A          160 -DMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECS  198 (298)
T ss_dssp             -TCCEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHH
T ss_pred             -CCcEEEecccchhhcCCC-cccccccCCccccCHHHhccc
Confidence             489999999998765443 233456799999999998643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=1.3e-26  Score=203.71  Aligned_cols=164  Identities=16%  Similarity=0.201  Sum_probs=128.4

Q ss_pred             cceEEEEEecccCceeEEEeccee-------EEEecC-----CCChhhHHHHHHHHhh-hcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-------QVLVSP-----QFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-------~~~~~~-----~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++.+.||+|+||.||+|.++.       +++...     ...+.+.+|+.+++.+ .|        ++|+++++.+.
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--------p~iv~~~~~~~   96 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--------PNIINLLGACE   96 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC--------TTBCCEEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCC--------Cchhhhceeee
Confidence            579999999999999999997632       333322     2345678899999999 66        77999999876


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                          ....+|+||||+ +++|.+++....              ...+++..+..++.||+.||.|||++ ||+||||||+
T Consensus        97 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~  171 (327)
T 1fvr_A           97 ----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAAR  171 (327)
T ss_dssp             ----ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGG
T ss_pred             ----eCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCccc
Confidence                677899999999 678888886542              23589999999999999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.+ +.++|+|||++...... .......+++.|+|||++.+.
T Consensus       172 NIl~~~~-~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  216 (327)
T 1fvr_A          172 NILVGEN-YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYS  216 (327)
T ss_dssp             GEEECGG-GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHC
T ss_pred             eEEEcCC-CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccc
Confidence            9999544 79999999998643322 122234578899999998654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.94  E-value=1.8e-26  Score=205.22  Aligned_cols=169  Identities=20%  Similarity=0.294  Sum_probs=122.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC---CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc-
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP---QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV-  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~-  146 (284)
                      ++|++.+.||+|+||+||+|.++     +++|...   ........++..+..+.|        +||+++++++...+. 
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h--------~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH--------PNIVQLQSYFYTLGER   94 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCC--------TTBCCEEEEEEEECSS
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCC--------CCcccHHHhhhccccc
Confidence            46999999999999999999863     3555432   234456667777777877        779999888764322 


Q ss_pred             --CCeEEEEEeccCCccHHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHh--hCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        147 --NGTHVCMVFEVLGHNLLKLIVK--SKYRGIPLENVRSIIRQILQGLNYLH--TKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       147 --~~~~~~iv~e~~~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~LH--~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                        ...++++||||+.+++...+..  .....+++..+..++.||+.||.|||  +. ||+||||||+|||++..++.++|
T Consensus        95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETTTTEEEE
T ss_pred             cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCCCCcEEE
Confidence              3456899999999888776654  22345899999999999999999999  98 99999999999999765689999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++....... ......||+.|+|||++.+.
T Consensus       174 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~  206 (360)
T 3e3p_A          174 CDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGN  206 (360)
T ss_dssp             CCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTC
T ss_pred             eeCCCceecCCCC-CcccccCCcceeCHHHHcCC
Confidence            9999987655432 33356789999999998553

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.94  E-value=1.9e-26  Score=201.28  Aligned_cols=166  Identities=20%  Similarity=0.281  Sum_probs=130.5

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEec--CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS--PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ..++|++.+.||+|+||.||+|.++     +++|..  ......+.+|+.+++.+.|        ++|+++++.+.    
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----   94 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS--------PHVVKYYGSYF----   94 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCC--------TTBCCEEEEEE----
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCC--------CCCccEEEEEE----
Confidence            4457999999999999999999763     344443  3345678899999999987        67999998776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||+. ||+|+||||+||+++.+ +.++|+|||+
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~-~~~kl~dfg~  171 (314)
T 3com_A           95 KNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTE-GHAKLADFGV  171 (314)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT-CCEEECCCTT
T ss_pred             eCCEEEEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCC-CCEEEeeccc
Confidence            677899999999 557777765433 4599999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +..............||+.|+|||++.+.
T Consensus       172 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  200 (314)
T 3com_A          172 AGQLTDTMAKRNTVIGTPFWMAPEVIQEI  200 (314)
T ss_dssp             CEECBTTBSCBCCCCSCGGGCCHHHHSSS
T ss_pred             chhhhhhccccCccCCCCCccChhhcCCC
Confidence            87665544444566899999999998653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.94  E-value=4.2e-26  Score=200.48  Aligned_cols=172  Identities=20%  Similarity=0.241  Sum_probs=134.9

Q ss_pred             cccee-ccceEEEEEecccCceeEEEecc---------eeEEEecCCCC----hhhHHHHHHHHhhhcCCCCCcccchhc
Q psy16752         70 IGMLF-NNRYRVTRKLGWGHFSTVWFTGS---------KTQVLVSPQFP----ETALDEIKLLKCVRDGDVNDPYRERVV  135 (284)
Q Consensus        70 ~~~~~-~~~y~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~i~  135 (284)
                      .++++ .++|++.+.||+|+||.||+|.+         .+++|......    +.+.+|+.+++.+.|        ++|+
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~   87 (327)
T 3lxl_A           16 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS--------DFIV   87 (327)
T ss_dssp             -CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCC--------TTBC
T ss_pred             hhhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCC--------Ccee
Confidence            34444 35799999999999999999972         23555443322    347889999999987        6688


Q ss_pred             cccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        136 QLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       136 ~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      ++++.+.  ......+|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++.+
T Consensus        88 ~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~  163 (327)
T 3lxl_A           88 KYRGVSY--GPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESE  163 (327)
T ss_dssp             CEEEEEE--CSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEET
T ss_pred             EEEEEEe--cCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChhhEEECCC
Confidence            8887653  33567899999999 778888887643 2499999999999999999999999 99999999999999665


Q ss_pred             CCcEEEEeccchhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        215 EARVKTLALNATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                       +.++|+|||++........   ......||+.|+|||++.+.
T Consensus       164 -~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  205 (327)
T 3lxl_A          164 -AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN  205 (327)
T ss_dssp             -TEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHC
T ss_pred             -CCEEEcccccceecccCCccceeeccCCccccccCHHHhccC
Confidence             8999999999886544322   22345688889999998654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.94  E-value=4.2e-27  Score=206.60  Aligned_cols=170  Identities=18%  Similarity=0.209  Sum_probs=135.4

Q ss_pred             ceeccceEEEEEecccCceeEEEecce----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ....++|++.+.||+|+||+||+|.++    +++|....     ....+.+|+.+++.+.|        +||+++++++.
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~   97 (326)
T 3uim_A           26 QVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVH--------RNLLRLRGFCM   97 (326)
T ss_dssp             HTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCC--------TTBCCCCEEEC
T ss_pred             HHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccC--------CCccceEEEEe
Confidence            344568999999999999999999763    35554322     22357899999999987        67999998776


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhCC--CcEecCCCCCCeeEeeCCCc
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--RGIPLENVRSIIRQILQGLNYLHTKC--RIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~--givHrDiKp~NIll~~~~~~  217 (284)
                          .....++||||+ +++|.+.+.....  ..+++..+..++.||+.||.|||+++  ||+||||||+|||++ +++.
T Consensus        98 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~-~~~~  172 (326)
T 3uim_A           98 ----TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD-EEFE  172 (326)
T ss_dssp             ----CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC-TTCC
T ss_pred             ----cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC-CCCC
Confidence                677889999999 6688887765432  34899999999999999999999975  899999999999995 4489


Q ss_pred             EEEEeccchhHhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|+|||++........ ......||+.|+|||++.+.
T Consensus       173 ~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  210 (326)
T 3uim_A          173 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG  210 (326)
T ss_dssp             EEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHS
T ss_pred             EEeccCccccccCcccccccccccCCcCccCHHHhccC
Confidence            99999999876543322 23355699999999998553

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.94  E-value=1.1e-26  Score=200.57  Aligned_cols=168  Identities=26%  Similarity=0.384  Sum_probs=136.5

Q ss_pred             cceeccceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      ...+.++|++.+.||+|+||.||+|.++     +++|+..      .....+.+|+.+++.+.|        ++|+++++
T Consensus        17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~   88 (287)
T 2wei_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH--------PNIMKLFE   88 (287)
T ss_dssp             THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCC--------TTBCCEEE
T ss_pred             HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccC--------CCccEEEE
Confidence            3445568999999999999999999762     3555421      223567889999999987        67999998


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC--C
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE--A  216 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~--~  216 (284)
                      .+.    ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+||+++.++  .
T Consensus        89 ~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~  161 (287)
T 2wei_A           89 ILE----DSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDC  161 (287)
T ss_dssp             EEE----CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTC
T ss_pred             EEe----CCCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcc
Confidence            776    678899999999 678888877654  599999999999999999999999 999999999999996543  4


Q ss_pred             cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++|+|||++....... ......||+.|+|||++.+.
T Consensus       162 ~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  198 (287)
T 2wei_A          162 DIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT  198 (287)
T ss_dssp             CEEECSTTGGGTBCCCS-SCSCHHHHHTTCCHHHHTTC
T ss_pred             cEEEeccCcceeecCCC-ccccccCcccccChHHhcCC
Confidence            79999999987654432 23345689999999998765

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=1.4e-27  Score=224.92  Aligned_cols=129  Identities=19%  Similarity=0.231  Sum_probs=105.5

Q ss_pred             hhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHH
Q psy16752        109 ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQIL  187 (284)
Q Consensus       109 ~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~  187 (284)
                      +.+.+|+.+|+++.+       |++|++++++++    +...+||||||+ |++|.+.+.+..  ++++.   .|+.||+
T Consensus       286 ~~~~~E~~~l~~~~~-------~~~i~~~~~~~e----d~~~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl  349 (569)
T 4azs_A          286 YELHNEIKFLTQPPA-------GFDAPAVLAHGE----NAQSGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLL  349 (569)
T ss_dssp             HHHHHHHHHHHSCCT-------TCCCCCEEEEEE----CSSEEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHH
T ss_pred             HHHHHHHHHHHhcCC-------CCCeeEEEEEEE----ECCEEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHH
Confidence            457889999999854       377999999887    889999999999 778888886643  47654   4789999


Q ss_pred             HHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       188 ~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      .||.|||++ |||||||||+||||+.+ +.+||+|||+|+..........+.+||+.|+|||++.+..
T Consensus       350 ~AL~ylH~~-GIIHRDIKPeNILL~~d-g~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~  415 (569)
T 4azs_A          350 RSLAALEKQ-GFWHDDVRPWNVMVDAR-QHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENK  415 (569)
T ss_dssp             HHHHHHHHT-TCEESCCCGGGEEECTT-SCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHC-CceeccCchHhEEECCC-CCEEEeecccCeeCCCCCccccCceechhhccHHHhCCCC
Confidence            999999999 99999999999999554 8999999999987766656667889999999999998753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.94  E-value=2.4e-26  Score=202.09  Aligned_cols=170  Identities=16%  Similarity=0.186  Sum_probs=132.2

Q ss_pred             ceeccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      .+..++|++.+.||+|+||.||+|.+          ..++|.....     ...+.+|+.+++.+.|        +||++
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~   97 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH--------QNIVR   97 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC--------TTBCC
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCC--------CCCCe
Confidence            34456899999999999999999984          2455554322     2456789999999987        67999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCee
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY-----RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL  210 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIl  210 (284)
                      +++.+.    .....|+||||+ +++|.+++.....     ..+++..+..++.||+.||.|||++ ||+||||||+|||
T Consensus        98 ~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIl  172 (327)
T 2yfx_A           98 CIGVSL----QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCL  172 (327)
T ss_dssp             EEEEEC----SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEE
T ss_pred             EEEEEc----CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEE
Confidence            998776    667789999999 7788888876532     3489999999999999999999999 9999999999999


Q ss_pred             EeeC--CCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        211 LCVD--EARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       211 l~~~--~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++.+  ...++|+|||++........  ......||+.|+|||++.+.
T Consensus       173 i~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  220 (327)
T 2yfx_A          173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG  220 (327)
T ss_dssp             ESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHC
T ss_pred             EecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCC
Confidence            9643  35799999999886654332  22355789999999998643

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.94  E-value=3.4e-26  Score=201.50  Aligned_cols=173  Identities=14%  Similarity=0.193  Sum_probs=127.8

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCC-CChhhHHHHHHHH--hhhcCCCCCcccchhccccccceEe-ccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ-FPETALDEIKLLK--CVRDGDVNDPYRERVVQLLDDFKIC-GVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~-~~~~~~~E~~~l~--~l~~~~~~~~~~~~i~~l~~~~~~~-~~~~  148 (284)
                      ++|++.+.||+|+||+||+|...   +++|+... ....+..|..++.  .+.|        +||+++++.+... ....
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h--------~~i~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEH--------DNIARFIVGDERVTADGR   84 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCC--------TTBCCEEEEEEEECTTSC
T ss_pred             HHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccC--------cchhhheecccccccCCC
Confidence            47999999999999999999763   34444322 2233444444433  3454        7788888754432 2355


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------CcEecCCCCCCeeEeeCCCcEE
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKC--------RIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------givHrDiKp~NIll~~~~~~v~  219 (284)
                      ..+|+||||+ +|+|.+++....   .++..+..++.||+.||.|||+.+        ||+||||||+|||++. .+.++
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~-~~~~k  160 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN-DGTCV  160 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT-TSCEE
T ss_pred             ceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC-CCcEE
Confidence            6789999999 778888886544   689999999999999999999753        8999999999999954 48999


Q ss_pred             EEeccchhHhhhCC--------CCCCcccCCCCccchhhhhhccchhhH
Q psy16752        220 TLALNATELAATGH--------KLPVSFCSTAPVQEYSELSRRMSKNKK  260 (284)
Q Consensus       220 l~Dfg~a~~~~~~~--------~~~~~~~gt~~~~aPE~l~~~~~~~~~  260 (284)
                      |+|||++.......        ......+||+.|+|||++.+.......
T Consensus       161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  209 (336)
T 3g2f_A          161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDX  209 (336)
T ss_dssp             ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGH
T ss_pred             EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccc
Confidence            99999987554321        122355799999999999886554433

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.94  E-value=3.9e-27  Score=211.37  Aligned_cols=167  Identities=14%  Similarity=0.060  Sum_probs=124.2

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++.+.||+|+||+||+|.++     +++|+...       ..+.+.+|+.+++.+...     .|+||+++++.+.
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l-----~hpniv~~~~~~~  146 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI-----KNQKQAKVHLRFI  146 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTC-----CSHHHHHHHHCBC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhcccc-----CCHHHHHHHhhhh
Confidence            357999999999999999999863     35555321       125577898666655431     1388988874332


Q ss_pred             ----EeccC-----------Ce-----EEEEEeccCCccHHHHHHhhCCCCCC-------HHHHHHHHHHHHHHHHHHhh
Q psy16752        143 ----ICGVN-----------GT-----HVCMVFEVLGHNLLKLIVKSKYRGIP-------LENVRSIIRQILQGLNYLHT  195 (284)
Q Consensus       143 ----~~~~~-----------~~-----~~~iv~e~~~~~l~~~~~~~~~~~~~-------~~~~~~i~~qi~~aL~~LH~  195 (284)
                          .....           ..     ..|+||||++|+|.+++....  .++       +..+..++.||+.||.|||+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  224 (377)
T 3byv_A          147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRLLASLHH  224 (377)
T ss_dssp             CCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence                11111           11     388999999999999988643  134       47788899999999999999


Q ss_pred             CCCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        196 KCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       196 ~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      + ||+||||||+|||++.+ +.++|+|||++.....   ...+.+| +.|+|||++.+.
T Consensus       225 ~-~ivHrDikp~NIll~~~-~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~  277 (377)
T 3byv_A          225 Y-GLVHTYLRPVDIVLDQR-GGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARR  277 (377)
T ss_dssp             T-TEECSCCCGGGEEECTT-CCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHH
T ss_pred             C-CeecCCCCHHHEEEcCC-CCEEEEechhheecCC---cccCCCC-cCccChhhhccc
Confidence            9 99999999999999654 8999999999875332   2335678 999999999876

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.4e-26  Score=202.87  Aligned_cols=165  Identities=14%  Similarity=0.166  Sum_probs=125.2

Q ss_pred             ccceEEEEEecccCceeEEEecce---------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ..+|++.+.||+|+||+||+|.++         .++|.....     ...+.+|+.+++.+.|        ++|+++++.
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~  114 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH--------HNIIRLEGV  114 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC--------TTBCCEEEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC--------CCCCcEEEE
Confidence            357999999999999999999763         344543322     2346789999999987        679999887


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.    .....++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++
T Consensus       115 ~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~-~~~~k  187 (333)
T 1mqb_A          115 IS----KYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNS-NLVCK  187 (333)
T ss_dssp             EC----SSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT-TCCEE
T ss_pred             Ee----cCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECC-CCcEE
Confidence            76    677899999999 557777776543 4599999999999999999999999 9999999999999954 58999


Q ss_pred             EEeccchhHhhhCCCCC---CcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKLP---VSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~~---~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++..........   ....+|+.|+|||++.+.
T Consensus       188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  225 (333)
T 1mqb_A          188 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR  225 (333)
T ss_dssp             ECCCCC-----------------CCCGGGSCHHHHHSC
T ss_pred             ECCCCcchhhccccccccccCCCCccccccCchhcccC
Confidence            99999988765432221   233467889999998643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=6.4e-27  Score=205.32  Aligned_cols=162  Identities=23%  Similarity=0.390  Sum_probs=127.7

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC------------CChhhHHHHHHHHhhhcCCCCCcccchhcc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------------FPETALDEIKLLKCVRDGDVNDPYRERVVQ  136 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~  136 (284)
                      +.++|++.+.||+|+||.||+|.++     +++|+...            ....+.+|+.+++.+.|        +||++
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~   79 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH--------PCIIK   79 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC--------TTBCC
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC--------CCCce
Confidence            4467999999999999999999762     35554322            12357889999999988        66999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      +++.+.    .. ..|+||||+ +++|.+.+...  ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++
T Consensus        80 ~~~~~~----~~-~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~  151 (322)
T 2ycf_A           80 IKNFFD----AE-DYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQE  151 (322)
T ss_dssp             EEEEEE----SS-SEEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSS
T ss_pred             EeeEEc----CC-ceEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCC
Confidence            888764    33 389999999 66888877654  3599999999999999999999999 999999999999996543


Q ss_pred             --CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        216 --ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       216 --~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                        ..++|+|||++...... .......||+.|+|||++.
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~~  189 (322)
T 2ycf_A          152 EDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLV  189 (322)
T ss_dssp             SSCCEEECCCTTCEECCCC-HHHHHHHSCCTTCCHHHHH
T ss_pred             CCCeEEEccCccceecccc-cccccccCCcCccCchhhc
Confidence              35999999998754322 1122457999999999984

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=3.8e-26  Score=199.51  Aligned_cols=166  Identities=19%  Similarity=0.257  Sum_probs=129.8

Q ss_pred             eeccceEEEEEecccCceeEEEecce----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +..++|++.+.||+|+||.||+|.+.    .++|+....      ...+.+|+.+++.+.+.      +++|+++++++.
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~------~~~iv~~~~~~~   98 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH------SDKIIRLYDYEI   98 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGG------CTTBCCEEEEEE
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhcccc------CCceEEEEEEee
Confidence            33467999999999999999999763    345543221      24568899999999862      267999998776


Q ss_pred             EeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        143 ICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                          ....+|+|||+.+++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++ + +.++|+|
T Consensus        99 ----~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~-~-~~~kL~D  169 (313)
T 3cek_A           99 ----TDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-D-GMLKLID  169 (313)
T ss_dssp             ----CSSEEEEEECCCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-T-TEEEECC
T ss_pred             ----cCCEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEE-C-CeEEEee
Confidence                778899999977899999987654  589999999999999999999999 999999999999993 3 7999999


Q ss_pred             ccchhHhhhCCC--CCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGHK--LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++........  ......||+.|+|||++.+
T Consensus       170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (313)
T 3cek_A          170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD  202 (313)
T ss_dssp             CSSSCC--------------CCGGGCCHHHHTT
T ss_pred             ccccccccCccccccccCCCCCCCcCCHHHHhh
Confidence            999876544322  2235679999999999876

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.94  E-value=1.6e-26  Score=222.49  Aligned_cols=169  Identities=19%  Similarity=0.269  Sum_probs=132.7

Q ss_pred             cccccceeccceEEEEEecccCceeEEEecce------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhc
Q psy16752         67 PVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVV  135 (284)
Q Consensus        67 ~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~  135 (284)
                      ++.+|+++.++|++.+.||+|+||+||+|.+.      +++|+....     ...+.+|+.++..++|        +||+
T Consensus        71 ~~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------p~iv  142 (681)
T 2pzi_A           71 QLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVH--------PSIV  142 (681)
T ss_dssp             SSCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCC--------TTBC
T ss_pred             CCCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCC--------CCcC
Confidence            35678889899999999999999999999753      344543222     1345789999999987        6799


Q ss_pred             cccccceEecc-CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        136 QLLDDFKICGV-NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       136 ~l~~~~~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      ++++++..... .....||||||+ +++|.+.+..    .+++..+..++.||+.||.|||++ |||||||||+|||++.
T Consensus       143 ~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~  217 (681)
T 2pzi_A          143 QIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTE  217 (681)
T ss_dssp             CEEEEEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECS
T ss_pred             eEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeC
Confidence            99998774333 223479999999 5566554432    499999999999999999999999 9999999999999954


Q ss_pred             CCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        214 DEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                        +.++|+|||++......    ...+||+.|+|||++.+.
T Consensus       218 --~~~kl~DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~  252 (681)
T 2pzi_A          218 --EQLKLIDLGAVSRINSF----GYLYGTPGFQAPEIVRTG  252 (681)
T ss_dssp             --SCEEECCCTTCEETTCC----SCCCCCTTTSCTTHHHHC
T ss_pred             --CcEEEEecccchhcccC----CccCCCccccCHHHHcCC
Confidence              48999999998765433    456799999999998654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.94  E-value=1.5e-26  Score=197.23  Aligned_cols=163  Identities=12%  Similarity=0.116  Sum_probs=129.7

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++.+.||+|+||+||+|.++   .++|+....      .+.+.+|+.+++.++|        +||+++++++.  ..
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~--~~   79 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH--------PNVLPVLGACQ--SP   79 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSC--------TTEECEEEEEC--TT
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCC--------CchhheEEEEc--cC
Confidence            47999999999999999999873   355543322      2356788888888877        77999998765  12


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                      ....+++||||+ +++|.+++.......+++..+..++.||+.||.|||++ +  |+||||||+||+++. ++.+++.||
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~-~~~~~l~~~  157 (271)
T 3kmu_A           80 PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDE-DMTARISMA  157 (271)
T ss_dssp             TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECT-TSCEEEEGG
T ss_pred             CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcC-CcceeEEec
Confidence            237889999999 67888888765544589999999999999999999999 9  999999999999954 478888888


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |++....     .....||+.|+|||++.+..
T Consensus       158 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~  184 (271)
T 3kmu_A          158 DVKFSFQ-----SPGRMYAPAWVAPEALQKKP  184 (271)
T ss_dssp             GSCCTTS-----CTTCBSCGGGSCHHHHHSCG
T ss_pred             cceeeec-----ccCccCCccccChhhhccCC
Confidence            8754322     22457899999999997653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.94  E-value=1.8e-26  Score=196.59  Aligned_cols=164  Identities=16%  Similarity=0.224  Sum_probs=131.8

Q ss_pred             cceEEEEEecccCceeEEEecc----eeEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----KTQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++|++.+.||+|+||.||+|.+    ..++|....   ..+.+.+|+.+++.++|        ++|+++++.+.    ..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~----~~   75 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH--------PKLVQLYGVCL----EQ   75 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCC--------TTBCCEEEEEC----SS
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCC--------CCEeeEEEEEc----cC
Confidence            4799999999999999999976    334554332   23567899999999987        67999988776    66


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...++||||+ +++|.+++.... ..+++..+..++.|++.||.|||++ ||+||||||+||+++.+ +.++|+|||++.
T Consensus        76 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~-~~~kl~dfg~~~  152 (267)
T 3t9t_A           76 APICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGEN-QVIKVSDFGMTR  152 (267)
T ss_dssp             SSCEEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGG-GCEEECCTTGGG
T ss_pred             CCeEEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCC-CCEEEccccccc
Confidence            7899999999 568887776543 3589999999999999999999999 99999999999999544 899999999987


Q ss_pred             HhhhCC-CCCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGH-KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~-~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...... .......+++.|+|||++.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~  180 (267)
T 3t9t_A          153 FVLDDQYTSSTGTKFPVKWASPEVFSFS  180 (267)
T ss_dssp             GBCCHHHHSTTSTTCCGGGCCHHHHHHC
T ss_pred             ccccccccccccccccccccChhhhcCC
Confidence            543221 122345678899999998643

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.94  E-value=7e-27  Score=219.00  Aligned_cols=167  Identities=20%  Similarity=0.275  Sum_probs=132.6

Q ss_pred             eeccceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +..++|++.+.||+|+||.||+|.++    +++|+...   ..+.+.+|+.+|+.++|        +||+++++.+.   
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--------pniv~~~~~~~---  332 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--------EKLVQLYAVVS---  332 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC---
T ss_pred             cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCC--------CCEeeEEEEEe---
Confidence            34567999999999999999999863    35554432   23568899999999988        66999988653   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ...+||||||+ +|+|.+++.......+++..+..++.||+.||.|||++ +||||||||+||||+. ++.++|+|||
T Consensus       333 --~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~-~~~~kl~DFG  408 (535)
T 2h8h_A          333 --EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGE-NLVCKVADFG  408 (535)
T ss_dssp             --SSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECG-GGCEEECCTT
T ss_pred             --eccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcC-CCcEEEcccc
Confidence              35689999999 67888888754334589999999999999999999999 9999999999999954 4799999999


Q ss_pred             chhHhhhCC-CCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGH-KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~-~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++....... .......++..|+|||++.+.
T Consensus       409 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  439 (535)
T 2h8h_A          409 LARLIEDNEYTARQGAKFPIKWTAPEAALYG  439 (535)
T ss_dssp             STTTCCCHHHHTTCSTTSCGGGSCHHHHHHC
T ss_pred             cceecCCCceecccCCcCcccccCHHHhccC
Confidence            987543211 112234577889999988643

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=3.3e-26  Score=199.77  Aligned_cols=162  Identities=17%  Similarity=0.229  Sum_probs=125.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||.||+|.+.     +++|+....       .+.+.+|+.+++.+.|        ++|+++++++. 
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------p~iv~~~~~~~-  104 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQE--------PHVVPIHDFGE-  104 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEE-
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCC--------CCeeEEEEEEe-
Confidence            46999999999999999999753     355554322       2457789999999987        67999998776 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.++|+|
T Consensus       105 ---~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~-~~~kl~D  177 (309)
T 2h34_A          105 ---IDGQLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSAD-DFAYLVD  177 (309)
T ss_dssp             ---ETTEEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT-SCEEECS
T ss_pred             ---eCCeEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCC-CCEEEec
Confidence               677899999999 568888877653  599999999999999999999999 99999999999999554 8999999


Q ss_pred             ccchhHhhhCC-CCCCcccCCCCccchhhhhh
Q psy16752        223 LNATELAATGH-KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       223 fg~a~~~~~~~-~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||++....... .......||+.|+|||++.+
T Consensus       178 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  209 (309)
T 2h34_A          178 FGIASATTDEKLTQLGNTVGTLYYMAPERFSE  209 (309)
T ss_dssp             CCC----------------CCGGGCCGGGTCC
T ss_pred             CccCccccccccccccccCCCcCccCHHHHcC
Confidence            99987655432 22335679999999998864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=5.7e-27  Score=205.53  Aligned_cols=165  Identities=21%  Similarity=0.250  Sum_probs=131.1

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      ++|++.+.||+|+||+||+|.++    .++|.....    .+.+.+|+.+++.++|        +||+++++.+.    .
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~----~  106 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRH--------PHLVSLIGFCD----E  106 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCC--------TTBCCEEEECC----C
T ss_pred             hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEc----C
Confidence            46999999999999999999763    345543222    2457789999999887        67999998776    6


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKY--RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      ....++||||+ +++|.+.+.....  ..+++..+..++.||+.||.|||++ ||+||||||+||+++ +++.++|+|||
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~-~~~~~kl~Dfg  184 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLD-ENFVPKITDFG  184 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEEC-TTCCEEECCCT
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEEC-CCCCEEEeecc
Confidence            77899999999 6687777654321  2489999999999999999999999 999999999999995 45899999999


Q ss_pred             chhHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++.......  .......||+.|+|||++.+.
T Consensus       185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  216 (321)
T 2qkw_B          185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKG  216 (321)
T ss_dssp             TCEECSSSSCCCCBCCCEEETTTCCHHHHHHC
T ss_pred             cccccccccccccccccCCCccccCHHHhcCC
Confidence            987543322  122345689999999998543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.94  E-value=3.5e-26  Score=198.14  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=127.2

Q ss_pred             ceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +|++.+.||+|+||+||+|.+.        .+++.....     .+.+.+|+.+++.++|        +||+++++++. 
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~-   96 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH--------PNVLSLLGICL-   96 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC--------TTBCCCCEEEC-
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCC--------CCEeeeeeEEE-
Confidence            6999999999999999999752        244443322     2456789999999987        66999888632 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                        ......|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++ +++.++|+|
T Consensus        97 --~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~-~~~~~kl~D  171 (298)
T 3f66_A           97 --RSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLD-EKFTVKVAD  171 (298)
T ss_dssp             --CSSSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEC-TTCCEEECS
T ss_pred             --cCCCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEC-CCCCEEECc
Confidence              2556789999999 558887776543 4589999999999999999999999 999999999999995 458999999


Q ss_pred             ccchhHhhhCC----CCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGH----KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~----~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++.......    .......+|+.|+|||++.+.
T Consensus       172 fg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  207 (298)
T 3f66_A          172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ  207 (298)
T ss_dssp             CGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHC
T ss_pred             ccccccccccchhccccccCCCCCccccChHHhcCC
Confidence            99987543322    122345678899999998654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=1.7e-26  Score=203.05  Aligned_cols=167  Identities=19%  Similarity=0.235  Sum_probs=119.0

Q ss_pred             cceEEEEEecccCceeEEEecc-----eeEEEecCC----CChhhHHHHHHHHhhh-cCCCCCcccchhccccccceEe-
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ----FPETALDEIKLLKCVR-DGDVNDPYRERVVQLLDDFKIC-  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~----~~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~~~~~~-  144 (284)
                      .+|++.+.||+|+||.||+|.+     .+++|....    ....+.+|+.++..+. |        +||+++++.+... 
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h--------~~iv~~~~~~~~~~   99 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH--------PNIVQFCSAASIGK   99 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTS--------TTBCCEEEEEEECT
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccC--------CChhhccccccccc
Confidence            4799999999999999999986     235554322    2345678999999996 6        7788888776321 


Q ss_pred             ---ccCCeEEEEEeccCCccHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCeeEeeCCCcE
Q psy16752        145 ---GVNGTHVCMVFEVLGHNLLKLIVKS-KYRGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       145 ---~~~~~~~~iv~e~~~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIll~~~~~~v  218 (284)
                         ......+++||||++|+|.+++... ....+++..+..++.||+.||.|||+. |  |+||||||+|||++. ++.+
T Consensus       100 ~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~-~~~~  177 (337)
T 3ll6_A          100 EESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSN-QGTI  177 (337)
T ss_dssp             TTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECT-TSCE
T ss_pred             cccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECC-CCCE
Confidence               2366789999999999999988762 234599999999999999999999999 9  999999999999954 4799


Q ss_pred             EEEeccchhHhhhCCCC------------CCcccCCCCccchhhhh
Q psy16752        219 KTLALNATELAATGHKL------------PVSFCSTAPVQEYSELS  252 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~~------------~~~~~gt~~~~aPE~l~  252 (284)
                      +|+|||++.........            ....+||+.|+|||++.
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  223 (337)
T 3ll6_A          178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID  223 (337)
T ss_dssp             EBCCCTTCBCCSSCC-------------------------------
T ss_pred             EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhh
Confidence            99999998765433211            12456999999999984

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.94  E-value=1.4e-26  Score=201.42  Aligned_cols=164  Identities=23%  Similarity=0.415  Sum_probs=132.5

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      +.++|.+.+.||+|+||.||+|.++     .++|+...    ....+.+|+.+++.+.|        ++|+++++.+.  
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~--   76 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH--------ENIVTLEDIYE--   76 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCC--------TTBCCEEEEEE--
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCC--------CCeeehhhhcc--
Confidence            4467999999999999999999763     34554322    23457899999999988        66999988776  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe--eCCCcEEEE
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC--VDEARVKTL  221 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~--~~~~~v~l~  221 (284)
                        ....+|+||||+ +++|.+.+....  .+++..+..++.||+.||.|||+. ||+||||||+||++.  .+.+.++|+
T Consensus        77 --~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~  151 (304)
T 2jam_A           77 --STTHYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMIT  151 (304)
T ss_dssp             --CSSEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBC
T ss_pred             --cCCEEEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEc
Confidence              778899999999 678888887654  489999999999999999999999 999999999999994  235789999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.....  ......+||+.|+|||++.+.
T Consensus       152 Dfg~~~~~~~--~~~~~~~~~~~y~aPE~~~~~  182 (304)
T 2jam_A          152 DFGLSKMEQN--GIMSTACGTPGYVAPEVLAQK  182 (304)
T ss_dssp             SCSTTCCCCC--BTTHHHHSCCCBCCTTTBSSC
T ss_pred             cCCcceecCC--CccccccCCCCccChHHhccC
Confidence            9999864332  223355799999999998654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.93  E-value=2e-26  Score=199.76  Aligned_cols=167  Identities=22%  Similarity=0.341  Sum_probs=118.3

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +..++|++.+.||+|+||.||+|.+.     +++|...     .....+.+|+.+++.+.|        +||+++++.+.
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~   83 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH--------PNIVSYYTSFV   83 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCC--------TTBCCEEEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCC--------CCEeeEEEEEe
Confidence            33467999999999999999999762     3444332     223456778888888877        77999998776


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhh------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKS------KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~------~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                          .....++||||+ +++|.+.+...      ....+++..+..++.||+.||.|||++ ||+||||||+||+++. +
T Consensus        84 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~-~  157 (303)
T 2vwi_A           84 ----VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGE-D  157 (303)
T ss_dssp             ----SSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECT-T
T ss_pred             ----ecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcC-C
Confidence                677899999999 67888877641      223589999999999999999999999 9999999999999954 4


Q ss_pred             CcEEEEeccchhHhhhCCC-----CCCcccCCCCccchhhhhh
Q psy16752        216 ARVKTLALNATELAATGHK-----LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~-----~~~~~~gt~~~~aPE~l~~  253 (284)
                      +.++|+|||++........     ......||+.|+|||++.+
T Consensus       158 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (303)
T 2vwi_A          158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ  200 (303)
T ss_dssp             CCEEECCCHHHHHCC---------------CCCTTCCHHHHHH
T ss_pred             CCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhcc
Confidence            8999999999876543321     2235679999999999865

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.93  E-value=1.7e-26  Score=197.78  Aligned_cols=163  Identities=26%  Similarity=0.416  Sum_probs=131.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++.+.||+|+||.||+|.++     .++++...     ..+.+.+|+.+++.+.|        ++|+++++.+.   
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~---   75 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH--------ENVVKFYGHRR---   75 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCC--------TTBCCEEEEEE---
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCC--------CCceeeeeEEE---
Confidence            57999999999999999999763     34444321     12567889999999987        66999988776   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       .....|+||||+ +++|.+.+...  ..+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.++|+|||
T Consensus        76 -~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~-~~~~kl~dfg  150 (276)
T 2yex_A           76 -EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFG  150 (276)
T ss_dssp             -ETTEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TCCEEECCCT
T ss_pred             -cCCEEEEEEEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEcc-CCCEEEeeCC
Confidence             677899999999 56777766543  3589999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .+.......  .......||+.|+|||++.+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (276)
T 2yex_A          151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRR  182 (276)
T ss_dssp             TCEECEETTEECCBCCCCSCGGGCCGGGGTCS
T ss_pred             CccccCCCcchhcccCCccccCccChHHHhcC
Confidence            987554322  223456799999999999764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.93  E-value=1.5e-26  Score=201.77  Aligned_cols=168  Identities=19%  Similarity=0.231  Sum_probs=130.8

Q ss_pred             ccceEEEEEecccCceeEEEecc----------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS----------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~----------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .++|++.+.||+|+||+||+|.+          ..++|+....     ...+.+|+.++..+.+       |++|+++++
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-------hp~iv~~~~   98 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-------HLNVVNLLG   98 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC-------CTTBCCEEE
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhccc-------CCCeeeEEE
Confidence            46799999999999999999963          2355544332     2346789999999953       377999988


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCC
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY--------------RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDI  204 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDi  204 (284)
                      .+.   .....+++||||+ +++|.+++.....              ..+++..+..++.||+.||.|||++ ||+||||
T Consensus        99 ~~~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~di  174 (316)
T 2xir_A           99 ACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDL  174 (316)
T ss_dssp             EEC---CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCC
T ss_pred             EEe---cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccC
Confidence            764   1345689999999 5688888866432              1278999999999999999999999 9999999


Q ss_pred             CCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        205 KPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       205 Kp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||+||+++. .+.++|+|||++........  ......||+.|+|||++.+.
T Consensus       175 kp~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  225 (316)
T 2xir_A          175 AARNILLSE-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR  225 (316)
T ss_dssp             SGGGEEECG-GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred             ccceEEECC-CCCEEECCCccccccccCccceeccCCCcceeecCchhhccc
Confidence            999999954 48999999999876544322  22355689999999988653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.93  E-value=5e-26  Score=217.80  Aligned_cols=167  Identities=19%  Similarity=0.201  Sum_probs=128.9

Q ss_pred             ceeccceEEEEEecccCceeEEEecce--------eEEEecCCCC-----hhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         72 MLFNNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQFP-----ETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        72 ~~~~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~~-----~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      .+..++|++.+.||+|+||.||+|.+.        .+++......     +.+.+|+.+++.++|        +||++++
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~H--------pnIv~l~  457 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH--------PHIVKLI  457 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCC--------TTBCCEE
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCC--------CCCCeEE
Confidence            334568999999999999999999762        2444433221     567889999999988        6799998


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCc
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEAR  217 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~  217 (284)
                      +.+.     ...+|+||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.
T Consensus       458 ~~~~-----~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~-~~  529 (656)
T 2j0j_A          458 GVIT-----ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSN-DC  529 (656)
T ss_dssp             EEEC-----SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEET-TE
T ss_pred             EEEe-----cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCC-CC
Confidence            8653     34589999999 678888776543 3589999999999999999999999 99999999999999765 89


Q ss_pred             EEEEeccchhHhhhCCCC-CCcccCCCCccchhhhhhc
Q psy16752        218 VKTLALNATELAATGHKL-PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       218 v~l~Dfg~a~~~~~~~~~-~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|+|||++......... .....+|+.|+|||++.+.
T Consensus       530 vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  567 (656)
T 2j0j_A          530 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR  567 (656)
T ss_dssp             EEECCCCCCCSCCC----------CCGGGCCHHHHHHC
T ss_pred             EEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCC
Confidence            999999998765433222 2234577899999998643

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.93  E-value=2e-26  Score=201.39  Aligned_cols=170  Identities=19%  Similarity=0.158  Sum_probs=130.7

Q ss_pred             ccceEEEEEecccCceeEEEecc-----eeEEEecCC----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .++|++.+.||+|+||.||+|.+     .+++|+...    ..+.+.+|+.+++.+.|        +||+++++++....
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~~~~   99 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNH--------PNILRLVAYCLRER   99 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCC--------TTBCCCCEEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCC--------CCeeeEEEEEEecc
Confidence            46799999999999999999986     234443321    23557789999999987        67999998876444


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                      ......|+||||+ +++|.+.+...  ....+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|
T Consensus       100 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~-~~~~kl~d  177 (317)
T 2buj_A          100 GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGD-EGQPVLMD  177 (317)
T ss_dssp             TTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECT-TSCEEECC
T ss_pred             CCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcC-CCCEEEEe
Confidence            4567899999999 56888887763  234599999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCC---------CCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHK---------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~---------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++........         ......||+.|+|||++.+.
T Consensus       178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  218 (317)
T 2buj_A          178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQ  218 (317)
T ss_dssp             CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCC
T ss_pred             cCcchhcccccccccccccccccccccCCcccCCHhHhccC
Confidence            998654321110         01134579999999998653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=9.9e-27  Score=205.92  Aligned_cols=169  Identities=21%  Similarity=0.329  Sum_probs=136.2

Q ss_pred             ccceeccceEEEEEecccCceeEEEecce---eEEEecCCC-------C--------------hhhHHHHHHHHhhhcCC
Q psy16752         70 IGMLFNNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF-------P--------------ETALDEIKLLKCVRDGD  125 (284)
Q Consensus        70 ~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~-------~--------------~~~~~E~~~l~~l~~~~  125 (284)
                      .+..+.++|++.+.||+|+||.||+|.+.   +++|.....       .              ..+.+|+.+++.++|  
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--  102 (348)
T 2pml_X           25 EKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN--  102 (348)
T ss_dssp             SSCEEETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC--
T ss_pred             hcccccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC--
Confidence            34555678999999999999999999762   244432110       0              678899999999987  


Q ss_pred             CCCcccchhccccccceEeccCCeEEEEEeccC-CccHHHH------HHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CC
Q psy16752        126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKL------IVKSKYRGIPLENVRSIIRQILQGLNYLHT-KC  197 (284)
Q Consensus       126 ~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~------~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~  197 (284)
                            ++|+++++.+.    ....+|+||||+ +++|.++      +.......+++..+..++.||+.||.|||+ . 
T Consensus       103 ------~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-  171 (348)
T 2pml_X          103 ------EYCLTCEGIIT----NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-  171 (348)
T ss_dssp             ------TTBCCCSEEEE----SSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS-
T ss_pred             ------CCcceEEEEEe----eCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC-
Confidence                  67999999876    678999999999 5577776      444324569999999999999999999999 9 


Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||+||||||+||+++.+ +.++|+|||.+......  ......||+.|+|||++.+.
T Consensus       172 ~i~H~dl~p~Nil~~~~-~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  225 (348)
T 2pml_X          172 NICHRDVKPSNILMDKN-GRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNE  225 (348)
T ss_dssp             CEECCCCCGGGEEECTT-SCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSC
T ss_pred             CEeecCCChHhEEEcCC-CcEEEeccccccccccc--cccCCCCCcCccCchhhcCC
Confidence            99999999999999544 89999999998765433  33456799999999999765

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.93  E-value=2.3e-26  Score=197.37  Aligned_cols=167  Identities=20%  Similarity=0.274  Sum_probs=130.6

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|+||.||+|.++     .+++....      ..+.+.+|+.+++.++|        +||+++++.+.  
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~~--   75 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH--------PNIVRYYDRII--   75 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE--
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCC--------CCCCeEEEEEe--
Confidence            46999999999999999999763     24444321      12457789999999987        66999888653  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCC-----cEecCCCCCCeeEeeCCC
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSK--YRGIPLENVRSIIRQILQGLNYLHTKCR-----IIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~g-----ivHrDiKp~NIll~~~~~  216 (284)
                      ......+|+||||+ +++|.+.+....  ...+++..+..++.||+.||.|||+. +     |+||||||+||+++. .+
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~-~~  153 (279)
T 2w5a_A           76 DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDG-KQ  153 (279)
T ss_dssp             EGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECS-SS
T ss_pred             cCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcC-CC
Confidence            12456899999999 568888887542  23489999999999999999999999 8     999999999999954 48


Q ss_pred             cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++|+|||++..............||+.|+|||++.+.
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  191 (279)
T 2w5a_A          154 NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM  191 (279)
T ss_dssp             CEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC
T ss_pred             CEEEecCchheeeccccccccccCCCccccChHHhccC
Confidence            99999999988765443333456799999999998654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.93  E-value=3.8e-26  Score=199.34  Aligned_cols=172  Identities=25%  Similarity=0.319  Sum_probs=128.2

Q ss_pred             cceeccceEEEEEecccCceeEEEecc-----eeEEEecCC----------CChhhHHHHHHHHhhhcCCCCCcccchhc
Q psy16752         71 GMLFNNRYRVTRKLGWGHFSTVWFTGS-----KTQVLVSPQ----------FPETALDEIKLLKCVRDGDVNDPYRERVV  135 (284)
Q Consensus        71 ~~~~~~~y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~  135 (284)
                      +..+.++|++.+.||+|+||.||+|.+     .+++|+...          ....+.+|+.++..+...    ..|+||+
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~----~~h~~i~  101 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG----GGHPGVI  101 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSS----CCCSSBC
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhccc----CCCCCee
Confidence            455667899999999999999999976     235555432          224456799999998310    0127799


Q ss_pred             cccccceEeccCCeEEEEEecc-C-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee
Q psy16752        136 QLLDDFKICGVNGTHVCMVFEV-L-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV  213 (284)
Q Consensus       136 ~l~~~~~~~~~~~~~~~iv~e~-~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~  213 (284)
                      ++++++.    .....++|||+ + +++|.+.+....  .+++..+..++.||+.||.|||+. ||+||||||+||+++.
T Consensus       102 ~~~~~~~----~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~  174 (312)
T 2iwi_A          102 RLLDWFE----TQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDL  174 (312)
T ss_dssp             CEEEEC---------CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEET
T ss_pred             eEEEEEe----cCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeC
Confidence            9999876    67788999998 4 678888887654  499999999999999999999999 9999999999999975


Q ss_pred             CCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        214 DEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       214 ~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +++.++|+|||++......  ......||+.|+|||++.+..
T Consensus       175 ~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~  214 (312)
T 2iwi_A          175 RRGCAKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQ  214 (312)
T ss_dssp             TTTEEEECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSC
T ss_pred             CCCeEEEEEcchhhhcccC--cccccCCcccccCceeeecCC
Confidence            6689999999998765432  234567999999999987543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=4.9e-26  Score=196.40  Aligned_cols=162  Identities=20%  Similarity=0.294  Sum_probs=127.9

Q ss_pred             cceEEEE-EecccCceeEEEecce-------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTR-KLGWGHFSTVWFTGSK-------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~-~LG~G~fg~Vy~a~~~-------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|.+.+ .||+|+||.||+|.++       .++++....     .+.+.+|+.+++.++|        ++|+++++.+.
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~   80 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN--------PYIVRLIGVCQ   80 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCC--------CCEeEEEEEec
Confidence            5688887 9999999999999742       355554332     3456789999999987        67999988763


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                           ...+++||||+ +++|.+++... ...+++..+..++.||+.||.|||+. ||+||||||+||+++.+ +.++|+
T Consensus        81 -----~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~-~~~kl~  152 (287)
T 1u59_A           81 -----AEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNR-HYAKIS  152 (287)
T ss_dssp             -----SSSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEET-TEEEEC
T ss_pred             -----CCCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCC-CCEEEC
Confidence                 34589999999 55777776543 34599999999999999999999999 99999999999999655 899999


Q ss_pred             eccchhHhhhCCC---CCCcccCCCCccchhhhhh
Q psy16752        222 ALNATELAATGHK---LPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       222 Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~  253 (284)
                      |||++........   ......||+.|+|||++.+
T Consensus       153 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (287)
T 1u59_A          153 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINF  187 (287)
T ss_dssp             CCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHH
T ss_pred             cccceeeeccCcceeeccccccccccccCHHHhcc
Confidence            9999876644322   1224457899999999864

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.93  E-value=3.1e-26  Score=209.27  Aligned_cols=164  Identities=20%  Similarity=0.240  Sum_probs=125.9

Q ss_pred             cceEEEEEecccCceeEEEec-c---eeEEEec-CCCChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEeccCCe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTG-S---KTQVLVS-PQFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~-~---~~~~~~~-~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .+|.+.+.||+|+||+||... .   .+++|.. ......+.+|+.+++.+ .|        +||+++++.+.    ...
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~H--------pnIv~l~~~~~----~~~   91 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEH--------PNVIRYFCTEK----DRQ   91 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCC--------TTBCCEEEEEE----ETT
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCC--------CCcCeEEEEEe----cCC
Confidence            369999999999999965432 2   3355543 33445678999999998 56        77999998776    778


Q ss_pred             EEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC----CCcEEEEeccc
Q psy16752        150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD----EARVKTLALNA  225 (284)
Q Consensus       150 ~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~----~~~v~l~Dfg~  225 (284)
                      .+|+||||++|+|.+.+..... .+.+..+..++.||+.||.|||++ ||+||||||+|||++.+    ...++|+|||+
T Consensus        92 ~~~lv~E~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~  169 (432)
T 3p23_A           92 FQYIAIELCAATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGL  169 (432)
T ss_dssp             EEEEEEECCSEEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred             EEEEEEECCCCCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence            8999999999999998876543 355556788999999999999999 99999999999999533    23688999999


Q ss_pred             hhHhhhCC---CCCCcccCCCCccchhhhhh
Q psy16752        226 TELAATGH---KLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       226 a~~~~~~~---~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +.......   ......+||+.|+|||++.+
T Consensus       170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~  200 (432)
T 3p23_A          170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE  200 (432)
T ss_dssp             EECC------------CCSCTTSCCGGGTSC
T ss_pred             eeeccCCCcceeeccccCCCcCccChhhhhc
Confidence            87655432   22345689999999999974

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=9.1e-26  Score=195.27  Aligned_cols=164  Identities=17%  Similarity=0.227  Sum_probs=128.4

Q ss_pred             ceEEEEEecccCceeEEEecc--------eeEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGS--------KTQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~--------~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .|.+.+.||+|+||+||+|.+        ..+++.....     .+.+.+|+.+++.++|        +||+++++++. 
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~-   92 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH--------PNVLALIGIML-   92 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC--------TTBCCCCEEEC-
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCC--------CCeeeEEEEEe-
Confidence            477889999999999999974        2344543332     2456789999999987        67999988765 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                        ......++||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++ +++.++|+|
T Consensus        93 --~~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~-~~~~~kl~D  167 (298)
T 3pls_A           93 --PPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLD-ESFTVKVAD  167 (298)
T ss_dssp             --CSSSCCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEC-TTCCEEECC
T ss_pred             --cCCCCcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEc-CCCcEEeCc
Confidence              1333448999999 778888876533 4589999999999999999999999 999999999999995 447999999


Q ss_pred             ccchhHhhhCC----CCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGH----KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~----~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++.......    .......+|+.|+|||++.+.
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  203 (298)
T 3pls_A          168 FGLARDILDREYYSVQQHRHARLPVKWTALESLQTY  203 (298)
T ss_dssp             TTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTC
T ss_pred             CCCcccccCCcccccccCcCCCCCccccChhhhccC
Confidence            99987543321    223355788999999998654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.93  E-value=1.7e-25  Score=195.26  Aligned_cols=169  Identities=19%  Similarity=0.195  Sum_probs=121.2

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ++|.+.+.||+|+||.||+|.+.        .++|.....      .+.+.+|+.+++.++|        +||+++++++
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~  105 (313)
T 3brb_A           34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH--------PNVIRLLGVC  105 (313)
T ss_dssp             GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCC--------TTBCCCCEEE
T ss_pred             HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCC--------CCeeeeeEEE
Confidence            57999999999999999998653        345543321      2447789999999987        6799998876


Q ss_pred             eEecc-CCeEEEEEeccC-CccHHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCC
Q psy16752        142 KICGV-NGTHVCMVFEVL-GHNLLKLIVKS----KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE  215 (284)
Q Consensus       142 ~~~~~-~~~~~~iv~e~~-~~~l~~~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~  215 (284)
                      ..... .....++||||+ +++|.+++...    ....+++..+..++.||+.||.|||++ ||+||||||+|||++. +
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~-~  183 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRD-D  183 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGGEEECT-T
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcC-C
Confidence            52111 123569999999 66888877542    224599999999999999999999999 9999999999999954 4


Q ss_pred             CcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        216 ARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.++|+|||++........  ......+++.|+|||++.+.
T Consensus       184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  224 (313)
T 3brb_A          184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR  224 (313)
T ss_dssp             SCEEECSCSCC----------------CCGGGSCHHHHHSS
T ss_pred             CcEEEeecCcceecccccccCcccccCCCccccCchhhcCC
Confidence            8999999999876654322  12244578889999998654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.93  E-value=1.1e-25  Score=196.35  Aligned_cols=161  Identities=22%  Similarity=0.257  Sum_probs=122.7

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCCC--ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQF--PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      ++|++.+.||+|+||+||+|.++   .++|.....  .+.+.+|+.+++.++|        +||+++++.+.      ..
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h--------p~iv~~~~~~~------~~   73 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNH--------PNIVKLYGACL------NP   73 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCC--------TTBCCEEEBCT------TT
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCC--------CCcCeEEEEEc------CC
Confidence            47999999999999999999763   344544322  3457889999999988        67999888654      23


Q ss_pred             EEEEeccC-CccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhh---CCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHT---KCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      .|+||||+ +++|.+.+..... ..+++..+..++.||+.||.|||+   + ||+||||||+|||++.++..++|+|||+
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~  152 (307)
T 2eva_A           74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGT  152 (307)
T ss_dssp             TEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC
T ss_pred             cEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEccccc
Confidence            78999999 6788888765432 237899999999999999999999   8 9999999999999976655689999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +......   .....||+.|+|||++.+.
T Consensus       153 ~~~~~~~---~~~~~gt~~y~aPE~~~~~  178 (307)
T 2eva_A          153 ACDIQTH---MTNNKGSAAWMAPEVFEGS  178 (307)
T ss_dssp             ---------------CCTTSSCHHHHTCC
T ss_pred             ccccccc---cccCCCCCceEChhhhCCC
Confidence            8755432   2245699999999998753

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.93  E-value=4e-26  Score=195.94  Aligned_cols=163  Identities=16%  Similarity=0.210  Sum_probs=123.0

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      ++|++.+.||+|+||+||+|.++   .++|+...  ..+.+.+|+.+++.++|        ++|+++++.+.   .....
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~---~~~~~   89 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH--------SNLVQLLGVIV---EEKGG   89 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCC--------TTBCCEEEEEC---CC--C
T ss_pred             hhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCC--------CCEeeEEEEEE---cCCCc
Confidence            57999999999999999999763   34454332  34667889999999987        66888888643   14457


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      +|+||||+ +++|.+.+.......+++..+..++.|++.||.|||++ ||+||||||+||+++. ++.++|+|||++...
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~-~~~~~l~Dfg~~~~~  167 (278)
T 1byg_A           90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSE-DNVAKVSDFGLTKEA  167 (278)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECT-TSCEEECCCCC----
T ss_pred             eEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeC-CCcEEEeeccccccc
Confidence            89999999 56888888765433378999999999999999999999 9999999999999954 489999999998755


Q ss_pred             hhCCCCCCcccCCCCccchhhhhhc
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...   .....+++.|+|||++.+.
T Consensus       168 ~~~---~~~~~~~~~y~aPE~~~~~  189 (278)
T 1byg_A          168 SST---QDTGKLPVKWTAPEALREK  189 (278)
T ss_dssp             -----------CCTTTSCHHHHHHC
T ss_pred             ccc---ccCCCccccccCHHHhCCC
Confidence            432   2244678999999998643

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.93  E-value=4e-26  Score=204.28  Aligned_cols=165  Identities=12%  Similarity=0.088  Sum_probs=114.9

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccc---
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF---  141 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~---  141 (284)
                      .|++.+.||+|+||+||+|.+.     +++|+....       .+.+.+|+.+++.+.+ .     |+|+++++..+   
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~-----hp~iv~~~~~~~~p  136 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-E-----SPEEARDRRRLLLP  136 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------------CBCCC
T ss_pred             eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-c-----ChhhhhhceeEEee
Confidence            4999999999999999999863     455554332       2345677666666652 1     25666544332   


Q ss_pred             -eEecc-C---------------CeEEEEEeccCCccHHHHHHhhCCCCCCHHHH------HHHHHHHHHHHHHHhhCCC
Q psy16752        142 -KICGV-N---------------GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENV------RSIIRQILQGLNYLHTKCR  198 (284)
Q Consensus       142 -~~~~~-~---------------~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~------~~i~~qi~~aL~~LH~~~g  198 (284)
                       ..... .               ...+|+||||++++|.+++..... .++....      ..++.||+.||.|||++ |
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~  214 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSK-G  214 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHC-C
Confidence             11110 1               156899999999999999987532 2444444      56679999999999999 9


Q ss_pred             cEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        199 IIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       199 ivHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      ||||||||+|||++. ++.++|+|||++......   .....+|+.|+|||++.+
T Consensus       215 ivHrDikp~NIll~~-~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~  265 (371)
T 3q60_A          215 LVHGHFTPDNLFIMP-DGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNA  265 (371)
T ss_dssp             EEETTCSGGGEEECT-TSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTC
T ss_pred             CccCcCCHHHEEECC-CCCEEEEecceeeecCCC---ccCccCCcCCcChhhccC
Confidence            999999999999955 489999999998755422   224567799999999965

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=5.3e-26  Score=203.88  Aligned_cols=164  Identities=16%  Similarity=0.168  Sum_probs=119.4

Q ss_pred             ceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .|++.+.||+|+||+||+|.+.        .+++.....     .+.+.+|+.+++.++|        +||+++++++. 
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~~~~~~~-  160 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH--------PNVLSLLGICL-  160 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCC--------TTBCCCCEEEC-
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC--------CCcceEEEEEE-
Confidence            5899999999999999999752        244443322     2456789999998887        67999988642 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                        ......|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|+|
T Consensus       161 --~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~-~~~~kL~D  235 (373)
T 3c1x_A          161 --RSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDE-KFTVKVAD  235 (373)
T ss_dssp             --CCSSCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT-TCCEEECC
T ss_pred             --cCCCCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECC-CCCEEEee
Confidence              1456789999999 668888776543 4589999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCCC----CCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHK----LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++........    ......+|+.|+|||++.+.
T Consensus       236 FG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  271 (373)
T 3c1x_A          236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ  271 (373)
T ss_dssp             C---------------------CCGGGSCHHHHHHC
T ss_pred             ccccccccccccccccccCCCCCcccccChHHhcCC
Confidence            999876543321    12244678889999998654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.93  E-value=2.4e-26  Score=198.96  Aligned_cols=169  Identities=21%  Similarity=0.235  Sum_probs=126.1

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe--
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC--  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~--  144 (284)
                      .++|++.+.||+|+||.||+|.+.     .++|....   ....+.+|+.+++.+.|        +||+++++.+...  
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~~~~~   76 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH--------QYVVRYYAAWLERRN   76 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEEECCC
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCc--------hHHHHHHHHHHhhcc
Confidence            457999999999999999999752     34444322   23457789999999987        6688887765421  


Q ss_pred             -------ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC
Q psy16752        145 -------GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       145 -------~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~  216 (284)
                             ......+|+||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++
T Consensus        77 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~-~~  153 (303)
T 1zy4_A           77 FVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDE-SR  153 (303)
T ss_dssp             CCC------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT-TS
T ss_pred             hhhhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcC-CC
Confidence                   12467899999999 668888887543 3478899999999999999999999 9999999999999954 48


Q ss_pred             cEEEEeccchhHhhhC--------------CCCCCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATG--------------HKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~--------------~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++|+|||++......              ........||+.|+|||++.+.
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  205 (303)
T 1zy4_A          154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT  205 (303)
T ss_dssp             CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSC
T ss_pred             CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC
Confidence            9999999998754321              1122356799999999998754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.93  E-value=9.3e-26  Score=195.03  Aligned_cols=162  Identities=16%  Similarity=0.201  Sum_probs=126.7

Q ss_pred             cceEEEE-EecccCceeEEEecc-------eeEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTR-KLGWGHFSTVWFTGS-------KTQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~-~LG~G~fg~Vy~a~~-------~~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+|++.+ .||+|+||+||+|.+       ..++++....      .+.+.+|+.+++.+.|        ++|+++++.+
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~~~   87 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN--------PYIVRMIGIC   87 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC--------TTBCCEEEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCC--------CCEEEEEEEE
Confidence            4799998 999999999999943       2344443322      3457889999999987        6699988866


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .     ....++||||+ +++|.+++....  .+++..+..++.||+.||.|||+. ||+||||||+||+++.+ +.++|
T Consensus        88 ~-----~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~-~~~kl  158 (291)
T 1xbb_A           88 E-----AESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQ-HYAKI  158 (291)
T ss_dssp             E-----SSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEET-TEEEE
T ss_pred             C-----CCCcEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCC-CcEEE
Confidence            3     45688999999 577887776543  599999999999999999999999 99999999999999665 79999


Q ss_pred             EeccchhHhhhCCCC---CCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKL---PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~---~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||++.........   .....+|+.|+|||++.+.
T Consensus       159 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  195 (291)
T 1xbb_A          159 SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY  195 (291)
T ss_dssp             CCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHC
T ss_pred             ccCCcceeeccCCCcccccccCCCCceeeChHHhccC
Confidence            999998765443221   1233567889999998653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.1e-25  Score=213.92  Aligned_cols=163  Identities=20%  Similarity=0.299  Sum_probs=125.2

Q ss_pred             cceEEEE-EecccCceeEEEecce-------eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTR-KLGWGHFSTVWFTGSK-------TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~-~LG~G~fg~Vy~a~~~-------~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +++.+.. .||+|+||.||+|.++       +++|+...     ..+.+.+|+.+++.++|        +||+++++++.
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~h--------pniv~l~~~~~  406 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN--------PYIVRLIGVCQ  406 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCC--------TTBCCEEEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCC--------CCEeeEEEEec
Confidence            4566766 8999999999999653       35555432     23567899999999988        67999998765


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          . ..+|+||||+ +|+|.+++... ...+++..+..++.||+.||.|||++ +||||||||+||||+.+ +.++|+
T Consensus       407 ----~-~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~-~~vkL~  478 (613)
T 2ozo_A          407 ----A-EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNR-HYAKIS  478 (613)
T ss_dssp             ----S-SSEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEET-TEEEEC
T ss_pred             ----c-CCeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCC-CcEEEe
Confidence                3 4589999999 66777777544 34599999999999999999999999 99999999999999655 899999


Q ss_pred             eccchhHhhhCCCC---CCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKL---PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~---~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.........   .....+++.|+|||++.+.
T Consensus       479 DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~  514 (613)
T 2ozo_A          479 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR  514 (613)
T ss_dssp             CCSTTTTCC--------------CCTTSCHHHHHHC
T ss_pred             eccCcccccCCCceeeeccCCCCccceeCHhhhcCC
Confidence            99999865433221   1233467899999998643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.93  E-value=4.6e-26  Score=196.87  Aligned_cols=164  Identities=23%  Similarity=0.317  Sum_probs=128.0

Q ss_pred             eEEEEEecccCceeEEEecc-----eeEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS-----KTQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~-----~~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      |.....||+|+||.||+|.+     .++++...    ...+.+.+|+.+++.+.|        +||+++++.+.    ..
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~----~~   91 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH--------KNIVQYLGSFS----EN   91 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCC--------TTBCCEEEEEE----ET
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCC--------CCEeeEeeEEE----eC
Confidence            44445899999999999986     23444422    234667889999999987        67999998876    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKY-RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ..+++||||+ +++|.+.+..... ..+++..+..++.||+.||.|||++ ||+||||||+||+++..++.++|+|||++
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~  170 (295)
T 2clq_A           92 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTS  170 (295)
T ss_dssp             TEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTC
T ss_pred             CcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccc
Confidence            7899999999 6777777765422 2467899999999999999999999 99999999999999765689999999998


Q ss_pred             hHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ..............||+.|+|||++.+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~  198 (295)
T 2clq_A          171 KRLAGINPCTETFTGTLQYMAPEIIDKG  198 (295)
T ss_dssp             EESCC-----CCCCCCGGGCCHHHHHHG
T ss_pred             cccCCCCCcccccCCCccccChhhhcCC
Confidence            7655443344567899999999999754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.93  E-value=1.1e-25  Score=194.16  Aligned_cols=164  Identities=20%  Similarity=0.229  Sum_probs=123.0

Q ss_pred             ccceEEEEEecccCceeEEEecce--------eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .++|++.+.||+|+||+||+|.+.        .++|+...       ..+.+.+|+.+++.+.|        ++|+++++
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~i~~~~~   88 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH--------RNLIRLYG   88 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC--------TTBCCEEE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCC--------CCcccEEE
Confidence            467999999999999999999742        24443321       12456789999999987        67999988


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v  218 (284)
                      ++.    . ...++||||+ +++|.+.+.... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.+ +.+
T Consensus        89 ~~~----~-~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~-~~~  160 (291)
T 1u46_A           89 VVL----T-PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATR-DLV  160 (291)
T ss_dssp             EEC----S-SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEET-TEE
T ss_pred             EEc----c-CCceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCC-CCE
Confidence            765    3 3388999999 678888887653 3489999999999999999999999 99999999999999655 799


Q ss_pred             EEEeccchhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        219 KTLALNATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       219 ~l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|+|||++........   ......+|+.|+|||++.+.
T Consensus       161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  199 (291)
T 1u46_A          161 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR  199 (291)
T ss_dssp             EECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHC
T ss_pred             EEccccccccccccccchhhhccCCCCceeeCchhhcCC
Confidence            9999999876543322   12245678889999998653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.93  E-value=8.7e-26  Score=196.46  Aligned_cols=164  Identities=21%  Similarity=0.268  Sum_probs=130.1

Q ss_pred             eEEEEEecccCceeEEEecce---eEEEecCC--------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ--------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      |...+.||+|+||+||+|.+.   .+++....        ..+.+.+|+.+++.++|        +||+++++.+.    
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~i~~~~~~~~----  100 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH--------ENLVELLGFSS----  100 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC--------TTBCCEEEEEC----
T ss_pred             cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC--------CCeEEEEEEEe----
Confidence            344579999999999999763   34444322        13457889999999988        67999988776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSK-YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      .....|+||||+ +++|.+.+.... ...+++..+..++.||+.||.|||++ ||+||||||+||+++ +++.++|+|||
T Consensus       101 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~-~~~~~kl~Dfg  178 (307)
T 2nru_A          101 DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLD-EAFTAKISDFG  178 (307)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEC-TTCCEEECCCT
T ss_pred             cCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEc-CCCcEEEeecc
Confidence            677899999999 778888876532 23589999999999999999999999 999999999999995 45899999999


Q ss_pred             chhHhhhCCC--CCCcccCCCCccchhhhhhcc
Q psy16752        225 ATELAATGHK--LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       225 ~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ++........  ......||+.|+|||++.+..
T Consensus       179 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  211 (307)
T 2nru_A          179 LARASEKFAQTVMTSRIVGTTAYMAPEALRGEI  211 (307)
T ss_dssp             TCEECCSCSSCEECSSCCSCGGGCCHHHHTTEE
T ss_pred             cccccccccccccccccCCCcCcCChHHhcCCC
Confidence            9875543222  223457999999999987653

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.93  E-value=1e-25  Score=205.85  Aligned_cols=168  Identities=26%  Similarity=0.307  Sum_probs=122.2

Q ss_pred             eeccceEEEEEecccCceeEEEecc----eeEEEecC-CCChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEecc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGS----KTQVLVSP-QFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~-~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .+.+.|.+.+.||+|+||+||.+..    .+++|... ...+.+.+|+.++..+ .|        +||+++++.+.    
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~H--------pnIv~~~~~~~----   79 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDH--------PNVIRYYCSET----   79 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTS--------TTBCCEEEEEE----
T ss_pred             hhhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCC--------CCcCeEEEEEe----
Confidence            3445688889999999999986533    23555432 2334568899999877 56        77999988776    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCC-----CCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-------
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRG-----IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-------  214 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-------  214 (284)
                      ....+|+||||++|+|.+.+.......     .++..+..++.||+.||.|||++ |||||||||+|||++.+       
T Consensus        80 ~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~  158 (434)
T 2rio_A           80 TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQ  158 (434)
T ss_dssp             CSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCC
T ss_pred             cCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCccccccc
Confidence            788999999999999998887643211     12334577999999999999999 99999999999999653       


Q ss_pred             -----CCcEEEEeccchhHhhhCCCC----CCcccCCCCccchhhhhh
Q psy16752        215 -----EARVKTLALNATELAATGHKL----PVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       215 -----~~~v~l~Dfg~a~~~~~~~~~----~~~~~gt~~~~aPE~l~~  253 (284)
                           ...++|+|||++.........    ....+||+.|+|||++.+
T Consensus       159 ~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  206 (434)
T 2rio_A          159 QTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE  206 (434)
T ss_dssp             TTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred             ccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence                 348999999998865543221    235689999999999865

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.93  E-value=8.3e-26  Score=200.75  Aligned_cols=163  Identities=22%  Similarity=0.340  Sum_probs=125.2

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      +.++|.+.+.||+|+||.||+|.++     +++|.....      ...+.+|+.+++.++|        +||+++++.+.
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~~~   93 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH--------ENVIGLLDVFT   93 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCC--------TTBCCCSEEEC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCC--------CCcccHhheEe
Confidence            3467999999999999999999762     355543321      2456789999999988        66888888765


Q ss_pred             Eecc--CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        143 ICGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       143 ~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      ....  ....+|+||||++++|.+.+.    ..+++..+..++.||+.||.|||++ ||+||||||+|||++. ++.++|
T Consensus        94 ~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~-~~~~kl  167 (353)
T 3coi_A           94 PASSLRNFYDFYLVMPFMQTDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNE-DCELKI  167 (353)
T ss_dssp             SCSSGGGCCCCEEEEECCSEEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECT-TCCEEE
T ss_pred             cccccccceeEEEEeccccCCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECC-CCcEEE
Confidence            2111  113469999999988776653    2489999999999999999999999 9999999999999954 489999


Q ss_pred             EeccchhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        221 LALNATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|||++......   .....||+.|+|||++.+
T Consensus       168 ~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~  197 (353)
T 3coi_A          168 LDFGLARHADAE---MTGYVVTRWYRAPEVILS  197 (353)
T ss_dssp             CSTTCTTC-----------CCSBCCSCHHHHSC
T ss_pred             eecccccCCCCC---ccccccCcCcCCHHHHhC
Confidence            999998764432   235678999999999865

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=3.5e-25  Score=194.63  Aligned_cols=168  Identities=21%  Similarity=0.233  Sum_probs=129.7

Q ss_pred             eccceEEEEEecccCceeEEEecc---------eeEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGS---------KTQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~---------~~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ..++|++.+.||+|+||.||+|..         ..++|.....    .+.+.+|+.+++.++|        ++|+++++.
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--------~~iv~~~~~  110 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH--------DNIVKYKGV  110 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCC--------TTBCCEEEE
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCC--------CCeeeEEEE
Confidence            345799999999999999999972         2344443322    2457789999999987        668888876


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.  ......+++||||+ +++|.+.+.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.++
T Consensus       111 ~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~-~~~k  185 (326)
T 2w1i_A          111 CY--SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENE-NRVK  185 (326)
T ss_dssp             EC--C----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEET-TEEE
T ss_pred             EE--ecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEEcCC-CcEE
Confidence            54  11334789999999 668888887653 3589999999999999999999999 99999999999999665 8999


Q ss_pred             EEeccchhHhhhCCCC---CCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHKL---PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~~---~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+|||++.........   .....++..|+|||++.+.
T Consensus       186 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  223 (326)
T 2w1i_A          186 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES  223 (326)
T ss_dssp             ECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHC
T ss_pred             EecCcchhhccccccccccccCCCCceeEECchhhcCC
Confidence            9999998766543221   2234577789999998653

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.92  E-value=2.3e-25  Score=212.52  Aligned_cols=160  Identities=16%  Similarity=0.225  Sum_probs=122.8

Q ss_pred             eEEE-EEecccCceeEEEecc-------eeEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         78 YRVT-RKLGWGHFSTVWFTGS-------KTQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        78 y~i~-~~LG~G~fg~Vy~a~~-------~~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      +.+. +.||+|+||+||+|.+       .+++|+...      ..+.+.+|+.+++.++|        +||+++++++. 
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~l~~~~~-  440 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN--------PYIVRMIGICE-  440 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCC--------TTBCCEEEEEE-
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEe-
Confidence            4443 4899999999999954       235554332      13568899999999988        67999998764 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                          ...+++||||+ +++|.+++....  .+++..+..++.||+.||.|||++ |||||||||+||||+.+ +.++|+|
T Consensus       441 ----~~~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~-~~~kL~D  512 (635)
T 4fl3_A          441 ----AESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQ-HYAKISD  512 (635)
T ss_dssp             ----SSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEET-TEEEECC
T ss_pred             ----cCCEEEEEEccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCC-CCEEEEE
Confidence                34578999999 678888876543  599999999999999999999999 99999999999999665 7999999


Q ss_pred             ccchhHhhhCCCC---CCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKL---PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~---~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||++.........   .....+|+.|+|||++.+.
T Consensus       513 FGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~  547 (635)
T 4fl3_A          513 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYY  547 (635)
T ss_dssp             TTHHHHTTC-------------CGGGSCHHHHHHC
T ss_pred             cCCccccccCccccccccCCCCceeeeChhhhcCC
Confidence            9999876544321   2234577889999998653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.92  E-value=5e-26  Score=198.91  Aligned_cols=164  Identities=16%  Similarity=0.242  Sum_probs=127.8

Q ss_pred             ccceEEEEEecccCceeEEEeccee--EEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSKT--QVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~~--~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      .++|++.+.||+|+||.||+|.++.  ++++..      ...+.+.+|+.+++.++|        +||+++++.+.    
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h--------~~iv~~~~~~~----   99 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH--------ENVVLFMGACM----   99 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCC--------TTBCCCCEEEE----
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCC--------CCEeEEEEEEe----
Confidence            3579999999999999999998643  444432      123557789999999987        67999998776    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+++||||+ +++|.+.+... ...+++..+..++.||+.||.|||++ ||+||||||+|||++  ++.++|+|||+
T Consensus       100 ~~~~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~--~~~~~l~Dfg~  175 (319)
T 2y4i_B          100 SPPHLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD--NGKVVITDFGL  175 (319)
T ss_dssp             CSSCEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC----CCEECCCSC
T ss_pred             cCCceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe--CCCEEEeecCC
Confidence            677899999999 56777766543 34589999999999999999999999 999999999999995  47999999998


Q ss_pred             hhHhhhC-----CCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATG-----HKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~-----~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +......     ........||+.|+|||++.+.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  209 (319)
T 2y4i_B          176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL  209 (319)
T ss_dssp             CC----------CCSCBCCSGGGGTSCHHHHSCB
T ss_pred             ccccccccccccccccccCCCcccccChHHhhhc
Confidence            7654321     1223345699999999999753

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.92  E-value=8.6e-26  Score=214.52  Aligned_cols=180  Identities=23%  Similarity=0.263  Sum_probs=130.7

Q ss_pred             CcccccccceeccceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccch
Q psy16752         64 GYHPVKIGMLFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRER  133 (284)
Q Consensus        64 ~~~~~~~~~~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~  133 (284)
                      ++.|..++..+ ++|++.+.||+|+||+||+|.++     +++|+....     .+.+.+|+.+++.++|        +|
T Consensus         3 G~~p~~pg~~~-grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~H--------pn   73 (676)
T 3qa8_A            3 GRSPSLPTQTC-GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH--------PN   73 (676)
T ss_dssp             ---------------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCB--------TT
T ss_pred             CCCCCCCCCCC-CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCC--------CC
Confidence            34444455544 57999999999999999999873     355543322     3457789999999988        66


Q ss_pred             hccccccceEe--ccCCeEEEEEeccC-CccHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCe
Q psy16752        134 VVQLLDDFKIC--GVNGTHVCMVFEVL-GHNLLKLIVKSK-YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENV  209 (284)
Q Consensus       134 i~~l~~~~~~~--~~~~~~~~iv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NI  209 (284)
                      |+++++.+...  .......|+||||+ +++|.+++.... ...+++..+..++.||+.||.|||+. ||+||||||+||
T Consensus        74 IV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHrDLKP~NI  152 (676)
T 3qa8_A           74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENI  152 (676)
T ss_dssp             BCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCCCCCSTTE
T ss_pred             CCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHe
Confidence            88887765411  11366789999999 778888877643 23589999999999999999999999 999999999999


Q ss_pred             eEeeCCC--cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        210 LLCVDEA--RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       210 ll~~~~~--~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +++.++.  .++|+|||++...... .......||+.|+|||++.+.
T Consensus       153 Ll~~~g~~~~vKL~DFG~a~~~~~~-~~~~~~~gt~~Y~APE~l~~~  198 (676)
T 3qa8_A          153 VLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPELLEQK  198 (676)
T ss_dssp             EEECCSSSCEEEECSCCCCCBTTSC-CCCCCCCSCCTTCSSCSSCCS
T ss_pred             EeecCCCceeEEEcccccccccccc-cccccccCCcccCChHHhccC
Confidence            9976532  5899999998866544 333456899999999998643

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.92  E-value=1e-24  Score=189.34  Aligned_cols=153  Identities=23%  Similarity=0.302  Sum_probs=122.8

Q ss_pred             ccccceeccceEEE-EEecccCceeEEEecc-----eeEEEecCCCChhhHHHHHHHHhh-hcCCCCCcccchhcccccc
Q psy16752         68 VKIGMLFNNRYRVT-RKLGWGHFSTVWFTGS-----KTQVLVSPQFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        68 ~~~~~~~~~~y~i~-~~LG~G~fg~Vy~a~~-----~~~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~  140 (284)
                      +..+.++. +|.+. +.||+|+||.||+|.+     .+++|+.. ......+|+.++.++ .|        +||+++++.
T Consensus        10 ~~~~~~~~-~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~e~~~~~~~~~h--------~~i~~~~~~   79 (299)
T 3m2w_A           10 IKKNAIID-DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-DCPKARREVELHWRASQC--------PHIVRIVDV   79 (299)
T ss_dssp             CBCSCGGG-TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEE-CSHHHHHHHHHHHHHTTS--------TTBCCEEEE
T ss_pred             Cccccccc-chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEec-ccHHHHHHHHHHHHhccC--------CCchhHHhh
Confidence            34444444 48787 7899999999999976     23555543 356778899988444 55        779999998


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCc
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EAR  217 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~  217 (284)
                      +.........+|+||||+ +++|.+.+.......+++..+..++.||+.||.|||++ ||+||||||+|||++.+  .+.
T Consensus        80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~  158 (299)
T 3m2w_A           80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAI  158 (299)
T ss_dssp             EEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCC
T ss_pred             hhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEecCCCCCc
Confidence            875445578899999999 66999888876555699999999999999999999999 99999999999999653  578


Q ss_pred             EEEEeccchhHhhh
Q psy16752        218 VKTLALNATELAAT  231 (284)
Q Consensus       218 v~l~Dfg~a~~~~~  231 (284)
                      ++|+|||++.....
T Consensus       159 ~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A          159 LKLTDFGFAKETTG  172 (299)
T ss_dssp             EEECCCTTCEECTT
T ss_pred             EEEecccccccccc
Confidence            99999999865443

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.91  E-value=8.5e-25  Score=192.06  Aligned_cols=163  Identities=18%  Similarity=0.200  Sum_probs=109.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCCC-----hhhHHHHH-HHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFP-----ETALDEIK-LLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~-----~~~~~E~~-~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|+||.||+|.++     +++|......     ..+..|+. +++.+.|        +||+++++.+.  
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h--------~niv~~~~~~~--   91 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC--------PYIVQFYGALF--   91 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCC--------TTBCCEEEEEE--
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCC--------CcEeeeeeEEE--
Confidence            57999999999999999999873     3555433221     22344444 4444555        77999999876  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKS---KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                        .....++||||+.++|.+.+...   ....+++..+..++.|++.||.|||+..||+||||||+|||++. ++.++|+
T Consensus        92 --~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~-~~~~kl~  168 (327)
T 3aln_A           92 --REGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDR-SGNIKLC  168 (327)
T ss_dssp             --CSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEET-TTEEEEC
T ss_pred             --eCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcC-CCCEEEc
Confidence              67889999999998888777641   23458999999999999999999998438999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |||++....... ......||+.|+|||++.
T Consensus       169 Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~  198 (327)
T 3aln_A          169 DFGISGQLVDSI-AKTRDAGCRPYMAPERID  198 (327)
T ss_dssp             CCSSSCC------------------------
T ss_pred             cCCCceeccccc-ccccCCCCccccCceeec
Confidence            999987654432 223447999999999984

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.91  E-value=2e-24  Score=188.54  Aligned_cols=161  Identities=22%  Similarity=0.261  Sum_probs=110.2

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCCC-----hhhH-HHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFP-----ETAL-DEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~-----~~~~-~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++.+.||+|+||.||+|.++     +++|+.....     .... .+..+++.+.|        +||+++++.+.  
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h--------~~i~~~~~~~~--   94 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC--------PYIVQCFGTFI--   94 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTC--------TTBCCEEEEEE--
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCC--------CceeeEEEEEe--
Confidence            46999999999999999999763     3555433221     1122 23334555565        77999999876  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEEec
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTLAL  223 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~Df  223 (284)
                        ....+|+||||+++.+....... ...+++..+..++.||+.||.|||+ . ||+||||||+||+++. ++.++|+||
T Consensus        95 --~~~~~~lv~e~~~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-~i~H~dlkp~Nil~~~-~~~~kl~df  169 (318)
T 2dyl_A           95 --TNTDVFIAMELMGTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDE-RGQIKLCDF  169 (318)
T ss_dssp             --CSSEEEEEECCCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCGGGEEECT-TSCEEECCC
T ss_pred             --cCCcEEEEEeccCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhC-CEEeCCCCHHHEEECC-CCCEEEEEC
Confidence              67889999999966555554433 3459999999999999999999998 6 8999999999999954 489999999


Q ss_pred             cchhHhhhCCCCCCcccCCCCccchhhhh
Q psy16752        224 NATELAATGHKLPVSFCSTAPVQEYSELS  252 (284)
Q Consensus       224 g~a~~~~~~~~~~~~~~gt~~~~aPE~l~  252 (284)
                      |++....... ......||+.|+|||++.
T Consensus       170 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~  197 (318)
T 2dyl_A          170 GISGRLVDDK-AKDRSAGCAAYMAPERID  197 (318)
T ss_dssp             TTC---------------CCTTCCHHHHC
T ss_pred             CCchhccCCc-cccccCCCccccChhhcc
Confidence            9987654432 233557999999999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.91  E-value=7.9e-24  Score=183.01  Aligned_cols=141  Identities=14%  Similarity=0.112  Sum_probs=115.4

Q ss_pred             cccccc-eeccceEEEEEecccCceeEEEecce-----eEEEecCCCC-------hhhHHHHHHHHhhhcCCCCCcccch
Q psy16752         67 PVKIGM-LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFP-------ETALDEIKLLKCVRDGDVNDPYRER  133 (284)
Q Consensus        67 ~~~~~~-~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~-------~~~~~E~~~l~~l~~~~~~~~~~~~  133 (284)
                      ++.+|. ++.++|++.+.||+|+||.||+|.+.     +++|+.....       +.+.+|+.++..+.|        +|
T Consensus        21 ~~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------p~   92 (286)
T 3uqc_A           21 QLVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK--------PG   92 (286)
T ss_dssp             CCCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCC--------TT
T ss_pred             cCCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCC--------CC
Confidence            456677 77889999999999999999999873     3556543321       567889999998887        67


Q ss_pred             hccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEe
Q psy16752        134 VVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLC  212 (284)
Q Consensus       134 i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~  212 (284)
                      |+++++++.    .....|+||||+ +++|.+++.. .   .....+..++.||+.||.|||++ ||+||||||+|||++
T Consensus        93 iv~~~~~~~----~~~~~~lv~e~~~g~~L~~~l~~-~---~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~  163 (286)
T 3uqc_A           93 VARVLDVVH----TRAGGLVVAEWIRGGSLQEVADT-S---PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVS  163 (286)
T ss_dssp             BCCEEEEEE----ETTEEEEEEECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEE
T ss_pred             cceeeEEEE----ECCcEEEEEEecCCCCHHHHHhc-C---CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEc
Confidence            999999876    677899999999 5677777632 2   46677899999999999999999 999999999999995


Q ss_pred             eCCCcEEEEeccc
Q psy16752        213 VDEARVKTLALNA  225 (284)
Q Consensus       213 ~~~~~v~l~Dfg~  225 (284)
                      . ++.++|++++.
T Consensus       164 ~-~g~~kl~~~~~  175 (286)
T 3uqc_A          164 I-DGDVVLAYPAT  175 (286)
T ss_dssp             T-TSCEEECSCCC
T ss_pred             C-CCCEEEEeccc
Confidence            4 48899987765

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.90  E-value=1.4e-24  Score=203.36  Aligned_cols=151  Identities=13%  Similarity=0.080  Sum_probs=105.5

Q ss_pred             EEEEEecccCceeEEEecce---eEEEec--CCC----------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         79 RVTRKLGWGHFSTVWFTGSK---TQVLVS--PQF----------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~~---~~~~~~--~~~----------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ...+.||+|+||+||+|...   ..++..  ...          .+.+.+|+.+++.++|        +||+.+..... 
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--------~nIv~~~~~~~-  409 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKD--------FGIPAPYIFDV-  409 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGG--------GTCCCCCEEEE-
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCC--------CCcCceEEEEE-
Confidence            33568999999999988542   233321  111          1236899999999998        66773332222 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         .....|+||||+ +++|.+.+..          +..++.||+.||.|||++ ||+||||||+|||++.   .++|+|
T Consensus       410 ---~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~---~~kL~D  472 (540)
T 3en9_A          410 ---DLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK---DLYIID  472 (540)
T ss_dssp             ---ETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS---SEEECC
T ss_pred             ---eCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC---eEEEEE
Confidence               334569999999 5777777643          568999999999999999 9999999999999954   999999


Q ss_pred             ccchhHhhhCCC-------CCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHK-------LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~-------~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+++.......       ...+++||+.|+|||++....
T Consensus       473 FGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~  512 (540)
T 3en9_A          473 FGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFL  512 (540)
T ss_dssp             CTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred             CccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHH
Confidence            999886543221       123678999999999998743

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.89  E-value=1.1e-23  Score=191.26  Aligned_cols=170  Identities=12%  Similarity=0.040  Sum_probs=119.0

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCccc-------------
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYR-------------  131 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~-------------  131 (284)
                      .|.+.+.||+|+||+||+|.+.     +++|+...       ..+.+.+|+.+++.+.|..  ++..             
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~--~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK--NQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCC--SHHHHHHHTCBCCCCEE
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCC--CHHHHHHhcccccchhh
Confidence            4889999999999999999863     46665431       2455778999999887621  1100             


Q ss_pred             ---chhccccccceE-eccCCeEEEEEeccCCccHHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEec
Q psy16752        132 ---ERVVQLLDDFKI-CGVNGTHVCMVFEVLGHNLLKLIVKS-----KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHT  202 (284)
Q Consensus       132 ---~~i~~l~~~~~~-~~~~~~~~~iv~e~~~~~l~~~~~~~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHr  202 (284)
                         ++...+...+.. .......++++|++++++|.+++...     ....+++..+..++.||+.||.|||++ |||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iiHr  235 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHT  235 (413)
T ss_dssp             EECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred             cccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccC
Confidence               000000000000 00012347889999999999888521     123477888999999999999999999 99999


Q ss_pred             CCCCCCeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        203 DIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       203 DiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||||+||||+.+ +.++|+|||++......   ..+.+| +.|+|||++.+.
T Consensus       236 DiKp~NILl~~~-~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~  282 (413)
T 3dzo_A          236 YLRPVDIVLDQR-GGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAER  282 (413)
T ss_dssp             CCCGGGEEECTT-CCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHH
T ss_pred             CcccceEEEecC-CeEEEEeccceeecCCc---cccCCC-CceeCchhhhcc
Confidence            999999999555 78999999998765433   345678 999999999543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.85  E-value=9.8e-22  Score=169.57  Aligned_cols=137  Identities=18%  Similarity=0.238  Sum_probs=103.1

Q ss_pred             eEEEEEecccCceeEEEecc----eeEEEecCCC----------------------ChhhHHHHHHHHhhhcCCCCCccc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS----KTQVLVSPQF----------------------PETALDEIKLLKCVRDGDVNDPYR  131 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~~----------------------~~~~~~E~~~l~~l~~~~~~~~~~  131 (284)
                      |.+.+.||+|+||.||+|.+    ..++|+....                      ...+.+|+.+++.+.+        
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~--------  163 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG--------  163 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT--------
T ss_pred             EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC--------
Confidence            55669999999999999976    2355554211                      2346789999999872        


Q ss_pred             chhccccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCee
Q psy16752        132 ERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL  210 (284)
Q Consensus       132 ~~i~~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIl  210 (284)
                      .+++.+   +.     ....|+||||+ +++|.+ +.      .  ..+..++.||+.||.|||+. ||+||||||+|||
T Consensus       164 ~~v~~~---~~-----~~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~-giiHrDlkp~NIL  225 (282)
T 1zar_A          164 LAVPKV---YA-----WEGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVL  225 (282)
T ss_dssp             SSSCCE---EE-----EETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEE
T ss_pred             CCcCeE---Ee-----ccceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHC-CCEeCCCCHHHEE
Confidence            223332   22     24569999999 557766 31      1  23457999999999999999 9999999999999


Q ss_pred             EeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        211 LCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       211 l~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ++  ++.++|+|||+|.             .+..++|||.+.+.+
T Consensus       226 l~--~~~vkl~DFG~a~-------------~~~~~~a~e~l~rdv  255 (282)
T 1zar_A          226 VS--EEGIWIIDFPQSV-------------EVGEEGWREILERDV  255 (282)
T ss_dssp             EE--TTEEEECCCTTCE-------------ETTSTTHHHHHHHHH
T ss_pred             EE--CCcEEEEECCCCe-------------ECCCCCHHHHHHHHH
Confidence            97  5899999999874             456689999997755

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.80  E-value=9.7e-20  Score=155.01  Aligned_cols=128  Identities=14%  Similarity=0.205  Sum_probs=94.5

Q ss_pred             eEEEEEecccCceeEEEecc-----e--eEEEecCCC----C------------------------hhhHHHHHHHHhhh
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS-----K--TQVLVSPQF----P------------------------ETALDEIKLLKCVR  122 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~-----~--~~~~~~~~~----~------------------------~~~~~E~~~l~~l~  122 (284)
                      |.+...||+|+||.||+|.+     .  .++|+....    .                        ..+.+|+.++..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999976     2  455542111    0                        14678999999999


Q ss_pred             cCCCCCcccchhccccccceEeccCCeEEEEEeccCCc------cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHh-h
Q psy16752        123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGH------NLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLH-T  195 (284)
Q Consensus       123 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~------~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH-~  195 (284)
                      ++++..      +.++.        ....++||||+++      .|.+....     .++..+..++.||+.||.||| .
T Consensus       129 ~~~i~~------p~~~~--------~~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~  189 (258)
T 1zth_A          129 EAGVSV------PQPYT--------YMKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQE  189 (258)
T ss_dssp             HTTCCC------CCEEE--------EETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHT
T ss_pred             hCCCCC------CeEEE--------cCCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHH
Confidence            864322      22221        1245899999953      45444321     234567889999999999999 8


Q ss_pred             CCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        196 KCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       196 ~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      . |||||||||+|||++.   .++|+|||+|..
T Consensus       190 ~-givHrDlkp~NILl~~---~~~liDFG~a~~  218 (258)
T 1zth_A          190 A-ELVHADLSEYNIMYID---KVYFIDMGQAVT  218 (258)
T ss_dssp             S-CEECSSCSTTSEEESS---SEEECCCTTCEE
T ss_pred             C-CEEeCCCCHHHEEEcC---cEEEEECccccc
Confidence            8 9999999999999954   899999999854

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.68  E-value=5.8e-17  Score=144.53  Aligned_cols=127  Identities=13%  Similarity=0.221  Sum_probs=83.6

Q ss_pred             eEEEEEecccCceeEEEecc----eeEEEecCCC------------------Chhh--------HHHHHHHHhhhcCCCC
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS----KTQVLVSPQF------------------PETA--------LDEIKLLKCVRDGDVN  127 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~~------------------~~~~--------~~E~~~l~~l~~~~~~  127 (284)
                      |++..+||.|+||.||+|.+    ..++|+....                  ....        .+|...|.++.+..+.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            89999999999999999976    3466652211                  0011        2344455555442211


Q ss_pred             CcccchhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       128 ~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                            +...+.        ....+|||||++|..+..+       .....+..++.||+.+|.+||.. |||||||||.
T Consensus       177 ------vp~p~~--------~~~~~LVME~i~G~~L~~l-------~~~~~~~~l~~qll~~l~~lH~~-gIVHrDLKp~  234 (397)
T 4gyi_A          177 ------VPEPIA--------QSRHTIVMSLVDALPMRQV-------SSVPDPASLYADLIALILRLAKH-GLIHGDFNEF  234 (397)
T ss_dssp             ------CCCEEE--------EETTEEEEECCSCEEGGGC-------CCCSCHHHHHHHHHHHHHHHHHT-TEECSCCSTT
T ss_pred             ------CCeeee--------ccCceEEEEecCCccHhhh-------cccHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHH
Confidence                  111111        1123799999965443222       12234567889999999999999 9999999999


Q ss_pred             CeeEeeCCC---------cEEEEeccch
Q psy16752        208 NVLLCVDEA---------RVKTLALNAT  226 (284)
Q Consensus       208 NIll~~~~~---------~v~l~Dfg~a  226 (284)
                      |||++.++.         .+.|+||+-+
T Consensus       235 NILl~~dgd~~d~~~~~~~~~iID~~Q~  262 (397)
T 4gyi_A          235 NILIREEKDAEDPSSITLTPIIIXFPQM  262 (397)
T ss_dssp             SEEEEEEECSSCTTSEEEEEEECCCTTC
T ss_pred             HEEEeCCCCcccccccccceEEEEeCCc
Confidence            999976631         4899999964

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.23  E-value=4.4e-11  Score=101.15  Aligned_cols=132  Identities=11%  Similarity=0.080  Sum_probs=94.9

Q ss_pred             ceEEEEEecccCceeEEEecc---eeEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGS---KTQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~---~~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .|++...++.|+.+.||++..   ...+|...    .....+.+|..+++.+.. .      ..+..++....    ...
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~-~------~~vP~v~~~~~----~~~   83 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-K------LPVPKVLHFER----HDG   83 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-T------SCCCCEEEEEE----ETT
T ss_pred             cceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc-C------CCCCeEEEEEe----cCC
Confidence            499999999999999999863   44555543    334568999999999965 1      22445555443    456


Q ss_pred             EEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh----------------------------------
Q psy16752        150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT----------------------------------  195 (284)
Q Consensus       150 ~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~----------------------------------  195 (284)
                      ..|+|||++.|..+.....      +......++.+++.+|..||.                                  
T Consensus        84 ~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (263)
T 3tm0_A           84 WSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN  157 (263)
T ss_dssp             EEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred             ceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence            7899999996644433211      112234678889999999998                                  


Q ss_pred             -------------------------CCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        196 -------------------------KCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       196 -------------------------~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                                               . .++|+|++|.|||++ ++..+.++||+.+.
T Consensus       158 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~l~HgDl~~~Nil~~-~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          158 WEEDTPFKDPRELYDFLKTEKPEEEL-VFSHGDLGDSNIFVK-DGKVSGFIDLGRSG  212 (263)
T ss_dssp             GSTTCSSSSHHHHHHHHHHCCCCCCE-EEECSSCCTTSEEEE-TTEEEEECCCTTCE
T ss_pred             ccccccCCCHHHHHHHHHhcCCCCCc-eEECCCCCcCcEEEE-CCcEEEEEEchhcc
Confidence                                     4 589999999999994 44556799999765

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.04  E-value=4e-10  Score=99.78  Aligned_cols=137  Identities=13%  Similarity=0.172  Sum_probs=92.0

Q ss_pred             EEEEecccCceeEEEecc---eeEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         80 VTRKLGWGHFSTVWFTGS---KTQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        80 i~~~LG~G~fg~Vy~a~~---~~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .++.|+.|.++.||++..   ...++...       .....+.+|..+++.+....+      .+++++..... .....
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~v------pvP~~~~~~~~-~~~~g  114 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDV------PVAKMYALCED-ESVIG  114 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSS------CCCCEEEEECC-TTTTS
T ss_pred             eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCC------CCCcEEEECCC-CCccC
Confidence            467889999999998864   33444443       123577889999999986332      23444443220 00114


Q ss_pred             EEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh----------------------------------
Q psy16752        150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT----------------------------------  195 (284)
Q Consensus       150 ~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~----------------------------------  195 (284)
                      ..|+||||+.|..+..   .....++......++.+++..|..||.                                  
T Consensus       115 ~~~~vme~v~G~~l~~---~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (359)
T 3dxp_A          115 RAFYIMEFVSGRVLWD---QSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET  191 (359)
T ss_dssp             SCEEEEECCCCBCCCC---TTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred             CeEEEEEecCCeecCC---CccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence            5789999996643311   111236788888899999999999996                                  


Q ss_pred             ------------------------CCCcEecCCCCCCeeEeeCCC-cEEEEeccchh
Q psy16752        196 ------------------------KCRIIHTDIKPENVLLCVDEA-RVKTLALNATE  227 (284)
Q Consensus       196 ------------------------~~givHrDiKp~NIll~~~~~-~v~l~Dfg~a~  227 (284)
                                              . ++||+|++|.|||++.++. .+.++||+.+.
T Consensus       192 ~~~~~~~~~~~~l~~~~~~~~~~~~-~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~  247 (359)
T 3dxp_A          192 ESIPAMDSLMDWLPQHIPQEDADLT-SIVHGDYRLDNLMFHPTEPRVLAVLDWELST  247 (359)
T ss_dssp             SCCHHHHHHHHHGGGCCCSTTSSCC-EEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred             cCChHHHHHHHHHHhcCCCccCCCc-eEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence                                    3 6999999999999976543 46899999876

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.03  E-value=1.1e-09  Score=91.95  Aligned_cols=130  Identities=13%  Similarity=0.059  Sum_probs=85.0

Q ss_pred             eEEEEEecccCceeEEEecc----eeEEEecCC-CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEE
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS----KTQVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVC  152 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~  152 (284)
                      |.+....+.|..+.||++..    +..+|+... ....+..|..+++.+.+..+      .+..++....    .....+
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~------~vP~~~~~~~----~~~~~~   91 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGV------PCAAVLDVVT----EAGRDW   91 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTC------CBCCEEEEEE----CSSCEE
T ss_pred             CceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCC------CCCeEEEecc----CCCCCE
Confidence            66655445666799998864    245555433 23567899999999976321      1334444333    445689


Q ss_pred             EEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC----------------------------------
Q psy16752        153 MVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR----------------------------------  198 (284)
Q Consensus       153 iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g----------------------------------  198 (284)
                      +||||+.|..+. .  .   ..+.   ..++.+++..|..||.. .                                  
T Consensus        92 ~v~e~i~G~~l~-~--~---~~~~---~~~~~~l~~~l~~lh~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (264)
T 1nd4_A           92 LLLGEVPGQDLL-S--S---HLAP---AEKVSIMADAMRRLHTL-DPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE  161 (264)
T ss_dssp             EEEECCSSEETT-T--S---CCCH---HHHHHHHHHHHHHHTTS-CGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred             EEEEecCCcccC-c--C---cCCH---hHHHHHHHHHHHHHhCC-CCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence            999999664433 1  1   1222   24566777777777764 3                                  


Q ss_pred             ------------------------cEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        199 ------------------------IIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       199 ------------------------ivHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                                              ++|+|++|.|||++ ++..+.++||+.+..
T Consensus       162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~-~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVE-NGRFSGFIDCGRLGV  214 (264)
T ss_dssp             GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE-TTEEEEECCCTTCEE
T ss_pred             ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE-CCcEEEEEcchhccc
Confidence                                    99999999999994 435566999998653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.65  E-value=5e-08  Score=84.20  Aligned_cols=136  Identities=12%  Similarity=0.170  Sum_probs=89.6

Q ss_pred             EEecccCceeEEEecceeEEEecCCC--ChhhHHHHHHHHhhhc-CCCCCcccchhccccccceEeccCCeEEEEEeccC
Q psy16752         82 RKLGWGHFSTVWFTGSKTQVLVSPQF--PETALDEIKLLKCVRD-GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL  158 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~~~~~~~~~~--~~~~~~E~~~l~~l~~-~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~  158 (284)
                      +.++.|....||++.....++.....  ...+.+|..+++.+.. ..+.      +..++.... ........|+||+++
T Consensus        26 ~~~~~G~~n~v~~v~~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~------vP~~~~~~~-~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           26 EISGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLP------IPEVVFTGM-PSETYQMSFAGFTKI   98 (304)
T ss_dssp             CEEEECSSEEEEESTTSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSC------CCCEEEECC-CCSSCSCSCEEEECC
T ss_pred             EecCCCCcceEEEECCEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCC------CCceEeecC-CCCCCCcceEEEccc
Confidence            45899999999999877777665432  3567889999988854 2211      222222111 000112347899999


Q ss_pred             CccHH-HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh------------------------------------------
Q psy16752        159 GHNLL-KLIVKSKYRGIPLENVRSIIRQILQGLNYLHT------------------------------------------  195 (284)
Q Consensus       159 ~~~l~-~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~------------------------------------------  195 (284)
                      .|..+ .... .   .++..+...++.+++..|..||.                                          
T Consensus        99 ~G~~l~~~~~-~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A           99 KGVPLTPLLL-N---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CCEECCHHHH-H---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             CCeECCcccc-c---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            65433 2222 1   26677777777788777777775                                          


Q ss_pred             ----------------CCCcEecCCCCCCeeEeeC-CCcEEEEeccchhHh
Q psy16752        196 ----------------KCRIIHTDIKPENVLLCVD-EARVKTLALNATELA  229 (284)
Q Consensus       196 ----------------~~givHrDiKp~NIll~~~-~~~v~l~Dfg~a~~~  229 (284)
                                      . .++|+|++|.||+++.+ ...+.++||+.+...
T Consensus       175 ~~~~~~l~~~~~~~~~~-~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYP-CLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             HHHHHHHTCGGGTCCCC-EEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             HHHHHHHhccccccCCc-eeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence                            2 47999999999999664 467889999987643

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.52  E-value=9e-07  Score=76.52  Aligned_cols=139  Identities=14%  Similarity=0.126  Sum_probs=80.2

Q ss_pred             EEEecccCceeEEEecceeEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEeccC
Q psy16752         81 TRKLGWGHFSTVWFTGSKTQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL  158 (284)
Q Consensus        81 ~~~LG~G~fg~Vy~a~~~~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~~  158 (284)
                      +..++.|....||+...+..+++...  ....+.+|..+|+.+.+...     ..+..++....   ......|+||+++
T Consensus        24 v~~l~~G~~n~v~~vg~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~-----v~VP~~~~~~~---~~~g~~~~v~e~i   95 (306)
T 3tdw_A           24 VESLGEGFRNYAILVNGDWVFRFPKSQQGADELNKEIQLLPLLVGCVK-----VNIPQYVYIGK---RSDGNPFVGYRKV   95 (306)
T ss_dssp             EEEEEECSSEEEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCS-----SBCCCEEEEEE---CTTSCEEEEEECC
T ss_pred             eeecCCCcceeEEEECCEEEEEecCCchHHHHHHHHHHHHHHHHhcCC-----CCCCCeEeecc---cCCCceEEEEecc
Confidence            35678888889998866666666432  13467889999999976310     11222222211   2344567999999


Q ss_pred             CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-------------------------------------------
Q psy16752        159 GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-------------------------------------------  195 (284)
Q Consensus       159 ~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-------------------------------------------  195 (284)
                      .|..+......   .++......++.++...|..||.                                           
T Consensus        96 ~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           96 QGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             CSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             CCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            66433221110   12233333333333333333332                                           


Q ss_pred             -----------------CCCcEecCCCCCCeeEee---CCCcEEEEeccchhHhhh
Q psy16752        196 -----------------KCRIIHTDIKPENVLLCV---DEARVKTLALNATELAAT  231 (284)
Q Consensus       196 -----------------~~givHrDiKp~NIll~~---~~~~v~l~Dfg~a~~~~~  231 (284)
                                       . .+||+|++|.|||++.   ++..+.++||+.+....+
T Consensus       173 ~~~~~~~l~~~~~~~~~~-~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~  227 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTP-RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDP  227 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCC-EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECG
T ss_pred             HHHHHHHHhCcccccCCC-eeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCH
Confidence                             2 5799999999999965   234458999998764433

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.99  E-value=1.5e-05  Score=70.10  Aligned_cols=29  Identities=24%  Similarity=0.239  Sum_probs=24.6

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .+||+|+.|.|||++ ++..+.++||+.+.
T Consensus       223 ~l~HgDl~~~Nil~~-~~~~~~vIDwe~a~  251 (357)
T 3ats_A          223 VLLWGDARVGNVLYR-DFQPVAVLDWEMVA  251 (357)
T ss_dssp             EEECSSCSGGGEEEE-TTEEEEECCGGGCE
T ss_pred             eEEeCCCCCCeEEEe-CCcEEEEEcccccc
Confidence            799999999999996 44567899998765

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.92  E-value=0.00012  Score=63.56  Aligned_cols=29  Identities=21%  Similarity=0.357  Sum_probs=25.2

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ++||+|+.|.|||++.+ +.+.++||+.+.
T Consensus       223 ~l~HgD~~~~Nil~~~~-~~~~lIDfe~a~  251 (346)
T 2q83_A          223 NLCHQDYGTGNTLLGEN-EQIWVIDLDTVS  251 (346)
T ss_dssp             CEECSSCSTTSEEECGG-GCEEECCCTTCE
T ss_pred             ceecCCCCcccEEEeCC-CcEEEEehhhcc
Confidence            89999999999999544 689999999764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.79  E-value=0.00012  Score=61.46  Aligned_cols=127  Identities=9%  Similarity=0.095  Sum_probs=72.5

Q ss_pred             ecccCce-eEEEecc-----eeEEEecCC-CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEec
Q psy16752         84 LGWGHFS-TVWFTGS-----KTQVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE  156 (284)
Q Consensus        84 LG~G~fg-~Vy~a~~-----~~~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e  156 (284)
                      +..|..| .||+...     ...+|..+. ....+.+|..+|+.+.. .+.      +.+++....    .....|+||+
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~-~vP------VP~v~~~~~----~~~~~~lvme  100 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTA-FMP------LPTIKHFIR----TPDDAWLLTT  100 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTT-TSC------CCCEEEEEE----ETTEEEEEEE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhcc-CCC------cCeEEEEEE----ECCeEEEEEE
Confidence            3344444 6786543     234444322 23456789999998864 211      334444333    4567899999


Q ss_pred             cCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-----------------------------------------
Q psy16752        157 VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-----------------------------------------  195 (284)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-----------------------------------------  195 (284)
                      ++.|..+.......     ......+..++...|.-||.                                         
T Consensus       101 ~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (272)
T 4gkh_A          101 AIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP  175 (272)
T ss_dssp             CCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred             eeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence            99664333222111     11122344444444555542                                         


Q ss_pred             ----------CC------CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        196 ----------KC------RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       196 ----------~~------givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                                ..      .++|+|+.|.|||++ +++.+-|+||+.+.
T Consensus       176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~-~~~~~~viDwe~a~  222 (272)
T 4gkh_A          176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFD-EGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEE-TTEEEEECCCTTCE
T ss_pred             HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEE-CCeEEEEEECcccc
Confidence                      00      379999999999995 44667799998865

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.66  E-value=0.00028  Score=62.80  Aligned_cols=30  Identities=13%  Similarity=0.259  Sum_probs=24.3

Q ss_pred             hCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        195 TKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       195 ~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .. .++|+|+.|.|||++.+  .+.++||..+.
T Consensus       226 ~~-~L~HGDl~~~Nil~~~~--~~~lID~e~a~  255 (397)
T 2olc_A          226 AE-TLIHGDLHTGSIFASEH--ETKVIDPEFAF  255 (397)
T ss_dssp             CC-EEECSCCSGGGEEECSS--CEEECCCTTCE
T ss_pred             CC-ceeeCCCCcCcEEEeCC--CeEEEeCcccc
Confidence            34 79999999999999543  58999997644

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.23  E-value=0.0015  Score=55.83  Aligned_cols=66  Identities=12%  Similarity=0.016  Sum_probs=40.3

Q ss_pred             EEEecccCceeEEEecceeEEEecCCC---ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEecc
Q psy16752         81 TRKLGWGHFSTVWFTGSKTQVLVSPQF---PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEV  157 (284)
Q Consensus        81 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e~  157 (284)
                      ++.|+.|....+|++ .+..+++....   .....+|..+++.+....+.       .+++..      ....-+++++|
T Consensus        23 i~~l~gG~tN~~~~~-~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~-------P~~~~~------~~~~~~~v~e~   88 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS-------PEVLHV------DPATGVMVTRY   88 (301)
T ss_dssp             CEEEESCSSEEEEEE-TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS-------CCEEEE------CTTTCCEEEEC
T ss_pred             eeEcCCcccccccee-eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC-------CceEEE------ECCCCEEEEee
Confidence            567888888999988 55555554332   22346799999988764321       122221      12123678999


Q ss_pred             C-Cc
Q psy16752        158 L-GH  160 (284)
Q Consensus       158 ~-~~  160 (284)
                      + +|
T Consensus        89 i~~g   92 (301)
T 3dxq_A           89 IAGA   92 (301)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            9 65

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.02  E-value=0.0026  Score=55.03  Aligned_cols=31  Identities=26%  Similarity=0.451  Sum_probs=25.8

Q ss_pred             CcEecCCCCCCeeEeeC---CCcEEEEeccchhH
Q psy16752        198 RIIHTDIKPENVLLCVD---EARVKTLALNATEL  228 (284)
Q Consensus       198 givHrDiKp~NIll~~~---~~~v~l~Dfg~a~~  228 (284)
                      .+||+|+.+.|||++.+   .+.+.++||+.+..
T Consensus       184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            79999999999999653   26799999998663

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.93  E-value=0.01  Score=50.77  Aligned_cols=142  Identities=9%  Similarity=0.084  Sum_probs=72.3

Q ss_pred             EEEEEecccCceeEEEecc---eeEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhcccc-ccceEeccCCeEEE
Q psy16752         79 RVTRKLGWGHFSTVWFTGS---KTQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLL-DDFKICGVNGTHVC  152 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~---~~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~-~~~~~~~~~~~~~~  152 (284)
                      .-++.|+.|....+|++..   +..+++...  ....+..|..++..+....+..   |.++... +....  ......+
T Consensus        25 ~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~v---P~~~~~~~g~~~~--~~~g~~~   99 (322)
T 2ppq_A           25 TSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSC---PLPLPRKDGELLG--ELSGRPA   99 (322)
T ss_dssp             EEEEEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHTTCCC---CCBCCBTTCCSCE--EETTEEE
T ss_pred             eEeeccCCCcccceEEEEeCCccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCC---CcccCCCCCCEEE--EECCEEE
Confidence            3456778888888988753   345555443  4566788999999987643221   1122111 10000  0124568


Q ss_pred             EEeccCCccH---------------HHHHHhhC--CC-C----CCHHHHHHH---------------HHHHHHHHHHHh-
Q psy16752        153 MVFEVLGHNL---------------LKLIVKSK--YR-G----IPLENVRSI---------------IRQILQGLNYLH-  194 (284)
Q Consensus       153 iv~e~~~~~l---------------~~~~~~~~--~~-~----~~~~~~~~i---------------~~qi~~aL~~LH-  194 (284)
                      ++|+|+.|..               +..+....  .. .    .........               ...+...+..+. 
T Consensus       100 ~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~  179 (322)
T 2ppq_A          100 ALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAA  179 (322)
T ss_dssp             EEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Confidence            8999995531               11111110  00 0    111100000               011333344444 


Q ss_pred             ------hCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        195 ------TKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       195 ------~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                            .. ++||+|+.|.|||++.+ ..+.++||+.+.
T Consensus       180 ~~~~~~~~-~liHgDl~~~Nil~~~~-~~~~lIDf~~a~  216 (322)
T 2ppq_A          180 HWPKDLPA-GVIHADLFQDNVFFLGD-ELSGLIDFYFAC  216 (322)
T ss_dssp             HCCCSSCE-EEECSCCCGGGEEEETT-EEEEECCCTTCE
T ss_pred             hCcccCCc-ccCCCCCCccCEEEeCC-ceEEEecchhcc
Confidence                  23 79999999999999543 455799998764

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.57  E-value=0.0074  Score=51.98  Aligned_cols=72  Identities=15%  Similarity=0.212  Sum_probs=46.2

Q ss_pred             EEEEecccCceeEEEecc---eeEEEecCC-CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEe
Q psy16752         80 VTRKLGWGHFSTVWFTGS---KTQVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVF  155 (284)
Q Consensus        80 i~~~LG~G~fg~Vy~a~~---~~~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~  155 (284)
                      -.+.|+.|....+|+...   +..+|.... ....+..|...|+.+.....     ..+++++....    .....|+||
T Consensus        40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~-----v~VP~vl~~~~----~~g~~~lvm  110 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNS-----INVPLVYGIGN----SQGHSFLLL  110 (312)
T ss_dssp             EEEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTS-----SBCCCEEEEEE----CSSEEEEEE
T ss_pred             eeEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCC-----CCcceEEEEee----cCCceEEEE
Confidence            457789999999998864   334444332 23457889999999875310     12444444322    446789999


Q ss_pred             ccCCc
Q psy16752        156 EVLGH  160 (284)
Q Consensus       156 e~~~~  160 (284)
                      ||+.|
T Consensus       111 e~l~G  115 (312)
T 3jr1_A          111 EALNK  115 (312)
T ss_dssp             ECCCC
T ss_pred             EeccC
Confidence            99954

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.49  E-value=0.022  Score=51.27  Aligned_cols=46  Identities=9%  Similarity=0.056  Sum_probs=30.9

Q ss_pred             EEEEecccCceeEEEecc------------eeEEEecCC-CC-hhhHHHHHHHHhhhcCC
Q psy16752         80 VTRKLGWGHFSTVWFTGS------------KTQVLVSPQ-FP-ETALDEIKLLKCVRDGD  125 (284)
Q Consensus        80 i~~~LG~G~fg~Vy~a~~------------~~~~~~~~~-~~-~~~~~E~~~l~~l~~~~  125 (284)
                      -+..|+.|....||++..            +..+++... .. ..+..|..+++.+....
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g  136 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERH  136 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCC
Confidence            356788888889998863            234444422 23 56778999999987643

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.35  E-value=0.014  Score=49.22  Aligned_cols=50  Identities=12%  Similarity=-0.048  Sum_probs=35.4

Q ss_pred             eccceEEEEEecccCceeEEEecc----eeEEEecCCC----ChhhHHHHHHHHhhhc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGS----KTQVLVSPQF----PETALDEIKLLKCVRD  123 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~~----~~~~~~E~~~l~~l~~  123 (284)
                      .+....-+..+|.|..+.||+.+.    ...+|.....    ...+..|...|+.+..
T Consensus        13 ~G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~   70 (288)
T 3f7w_A           13 TGREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGR   70 (288)
T ss_dssp             HCCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTC
T ss_pred             cCCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHh
Confidence            344567788999999999999864    3455553322    2356789999999865

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.36  E-value=0.011  Score=52.88  Aligned_cols=32  Identities=16%  Similarity=0.333  Sum_probs=26.3

Q ss_pred             hhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        194 HTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       194 H~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      +.. .++|+|++|.|||++.+ + +.++||+.+.+
T Consensus       230 ~~~-~liHGDl~~~Nil~~~~-~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQ-ALIHGDLHTGSVMVTQD-S-TQVIDPEFSFY  261 (420)
T ss_dssp             BCC-EEECSCCSGGGEEECSS-C-EEECCCTTCEE
T ss_pred             CCC-eEEecCCCCCcEEEeCC-C-CEEEeCccccc
Confidence            456 89999999999999544 3 99999987653

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=93.78  E-value=0.042  Score=47.02  Aligned_cols=27  Identities=22%  Similarity=0.267  Sum_probs=23.8

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .+||+|++|.|||++ +  .+.++||+.+.
T Consensus       196 ~l~HgD~~~~Nil~~-~--~~~lIDfe~a~  222 (328)
T 1zyl_A          196 LRLHGDCHAGNILWR-D--GPMFVDLDDAR  222 (328)
T ss_dssp             EECCSSCSGGGEEES-S--SEEECCCTTCC
T ss_pred             eeeeCCCCcccEeEc-C--CCEEEECCCCC
Confidence            689999999999995 3  89999998765

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=91.77  E-value=0.11  Score=47.18  Aligned_cols=45  Identities=9%  Similarity=-0.066  Sum_probs=26.9

Q ss_pred             EEEEecccCceeEEEecc-----eeEEEecCCCCh---hhHHHHHHHHhhhcC
Q psy16752         80 VTRKLGWGHFSTVWFTGS-----KTQVLVSPQFPE---TALDEIKLLKCVRDG  124 (284)
Q Consensus        80 i~~~LG~G~fg~Vy~a~~-----~~~~~~~~~~~~---~~~~E~~~l~~l~~~  124 (284)
                      -++.|+.|-...+|++..     +..+++......   +..+|..+++.+...
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~  164 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNK  164 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTS
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhc
Confidence            356788888889998863     234444322222   226899999999763

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=90.79  E-value=0.16  Score=43.92  Aligned_cols=31  Identities=26%  Similarity=0.391  Sum_probs=25.7

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      +++|+|+.+.||+++.+ +.+.++||+.+...
T Consensus       207 ~~~HgD~~~~N~l~~~~-~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNE-ESIYIIDWDEPMLA  237 (339)
T ss_dssp             EEECSCCCGGGEEECGG-GCEEECCCSSCEEE
T ss_pred             eeEeCCCCcCCEEEeCC-CeEEEEECCCCeeC
Confidence            69999999999999543 67999999876543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=90.68  E-value=0.17  Score=44.05  Aligned_cols=28  Identities=11%  Similarity=0.267  Sum_probs=23.1

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      +++|+|+.|.|||++.  +.+.++||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~--~~~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTN--KCLRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC---CEEECCCTTCE
T ss_pred             EEEeCCCCcccEEecC--CcEEEEEecCCC
Confidence            6999999999999843  358999998765

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=89.81  E-value=0.17  Score=44.73  Aligned_cols=30  Identities=20%  Similarity=0.345  Sum_probs=25.5

Q ss_pred             CcEecCCCCCCeeEeeC---CCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVD---EARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~---~~~v~l~Dfg~a~  227 (284)
                      .++|+|+.+.|||++.+   .+.+.++||..+.
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            69999999999999655   3689999998766

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=84.52  E-value=0.35  Score=42.84  Aligned_cols=31  Identities=16%  Similarity=0.325  Sum_probs=25.2

Q ss_pred             CcEecCCCCCCeeEee-----CCCcEEEEeccchhH
Q psy16752        198 RIIHTDIKPENVLLCV-----DEARVKTLALNATEL  228 (284)
Q Consensus       198 givHrDiKp~NIll~~-----~~~~v~l~Dfg~a~~  228 (284)
                      .++|.|+.+.|||+..     +...+.++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            3689999999999953     346899999988663

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=80.36  E-value=0.67  Score=41.47  Aligned_cols=28  Identities=14%  Similarity=0.380  Sum_probs=24.4

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .++|+|+.+.||+  .+++.+.++||..|.
T Consensus       263 ~~~H~D~~~~N~l--~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL--QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE--ECSSCEEECCCTTCE
T ss_pred             eEECCCCCcccee--cCCCcEEEEecccCC
Confidence            5899999999999  455789999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	284
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-28
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-22
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-21
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-19
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-18
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-17
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-17
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-17
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-17
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-16
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-16
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-16
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-16
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-16
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-16
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-15
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-15
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-15
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-14
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-14
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-14
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-14
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-14
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-14
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-13
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-13
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-13
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-12
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-12
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-12
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-12
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-12
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-12
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-11
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	5e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-07

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  108 bits (269), Expect = 7e-28
 Identities = 79/171 (46%), Positives = 104/171 (60%), Gaps = 12/171 (7%)

Query: 65  YHPVKIGMLF-NNRYRVTRKLGWGHFSTVWF---TGSKTQVLV-----SPQFPETALDEI 115
           YHP   G  + + RY + RKLGWGHFSTVW      + T V +        + E A DEI
Sbjct: 1   YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEI 60

Query: 116 KLLKCVRDGDV---NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYR 172
           KLL+ V D D    +      +++LLD F   G NG HV MVFEVLG NLL LI K ++R
Sbjct: 61  KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 120

Query: 173 GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLAL 223
           GIPL  V+ I +Q+L GL+Y+H +C IIHTDIKPENVL+ + ++    + +
Sbjct: 121 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 171

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 3e-22
 Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 23/152 (15%)

Query: 73  LFNNRYRVTRKLGWGHFSTVW---FTGSKTQVLV-------SPQFPETALDEIKLLKCVR 122
           L ++ +    +LG G+   V+      S   +          P      + E+++L    
Sbjct: 3   LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSI 182
                      +V           +   + +  E +    L  ++K K   IP + +  +
Sbjct: 63  S--------PYIVGFYG----AFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKV 109

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
              +++GL YL  K +I+H D+KP N+L+   
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 141

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.9 bits (220), Expect = 2e-21
 Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 22/163 (13%)

Query: 70  IGMLFNNRY-RVTRKLGWGHFSTVW---FTGSKTQVLV--------SPQFPETALDEIKL 117
           +GM  + R+ +   ++G G F TV+    T +  +V          +    +   +E ++
Sbjct: 2   VGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEM 61

Query: 118 LKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
           LK ++           +V+  D ++        + +V E++    LK  +K +++ + ++
Sbjct: 62  LKGLQ--------HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIK 112

Query: 178 NVRSIIRQILQGLNYLHTKC-RIIHTDIKPENVLLCVDEARVK 219
            +RS  RQIL+GL +LHT+   IIH D+K +N+ +      VK
Sbjct: 113 VLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVK 155

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.7 bits (217), Expect = 6e-21
 Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 22/147 (14%)

Query: 77  RYRVTRKLGWGHFSTVWF-TGSKTQVLV--------SPQFPETALDEIKLLKCVRDGDVN 127
            + +  +LG G F  V+     +T VL         S +  E  + EI +L         
Sbjct: 13  FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH---- 68

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
                 +V+LLD          ++ ++ E      +  ++    R +    ++ + +Q L
Sbjct: 69  ----PNIVKLLD----AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 120

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVD 214
             LNYLH   +IIH D+K  N+L  +D
Sbjct: 121 DALNYLHDN-KIIHRDLKAGNILFTLD 146

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 84.4 bits (208), Expect = 2e-19
 Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 22/149 (14%)

Query: 76  NRYRVTRKLGWGHFSTVW-----FTGS----KTQVLVSPQFPETALDEIKLLKCVRDGDV 126
           + Y +  +LG G F  V       TG+    K  +       ET   EI+ +  +R    
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH--- 82

Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
                  +V L D       +   + M++E +    L   V  ++  +  +     +RQ+
Sbjct: 83  -----PTLVNLHD----AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV 133

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
            +GL ++H     +H D+KPEN++     
Sbjct: 134 CKGLCHMHENN-YVHLDLKPENIMFTTKR 161

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.7 bits (198), Expect = 3e-18
 Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 19/154 (12%)

Query: 74  FNNRYRVTRKLGWGHFSTVW----FTGSKTQVLV--------SPQFPETALDEIKLLKCV 121
            + +Y    ++G G +  V+           V +            P + + E+ +L+ +
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVN-GTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVR 180
              +        VV+L D   +   +  T + +VFE +  +L   + K    G+P E ++
Sbjct: 65  ETFE-----HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 119

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            ++ Q+L+GL++LH   R++H D+KP+N+L+   
Sbjct: 120 DMMFQLLRGLDFLH-SHRVVHRDLKPQNILVTSS 152

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (196), Expect = 4e-18
 Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 26/151 (17%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQV---------LVSPQFPETALDEIKLLKCVRD 123
             + + R LG G F  V+      SK  +         L           E+++   +R 
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 64

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
                     +++L         + T V ++ E      +   ++ K      +   + I
Sbjct: 65  -------HPNILRLYG----YFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYI 112

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            ++   L+Y H+K R+IH DIKPEN+LL   
Sbjct: 113 TELANALSYCHSK-RVIHRDIKPENLLLGSA 142

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 2e-17
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 24/151 (15%)

Query: 74  FNNRYRVTRKLGWGHFSTVW---FTGSKTQVLV-------SPQFPETALDEIKLLKCVRD 123
           F   + + + LG G +  V       ++  V V       +   PE    EI + K +  
Sbjct: 3   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
                   E VV+           G    +  E      L   ++    G+P  + +   
Sbjct: 63  --------ENVVKFYG----HRREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFF 109

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            Q++ G+ YLH    I H DIKPEN+LL   
Sbjct: 110 HQLMAGVVYLHGIG-ITHRDIKPENLLLDER 139

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 78.6 bits (193), Expect = 2e-17
 Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 25/159 (15%)

Query: 67  PVKIGMLFNNRYRVTRKLGWGHFSTVW---FTGSKTQVLV------SPQFPETALDEIKL 117
            VK G +++  Y +  +LG G F  V       +    +        P    T  +EI +
Sbjct: 21  EVKQGSVYD-YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI 79

Query: 118 LKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL 176
           +  +           +++ L D       +   + ++ E + G  L   I    Y+ +  
Sbjct: 80  MNQLHH--------PKLINLHD----AFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSE 126

Query: 177 ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
             V + +RQ  +GL ++H +  I+H DIKPEN++    +
Sbjct: 127 AEVINYMRQACEGLKHMH-EHSIVHLDIKPENIMCETKK 164

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.1 bits (192), Expect = 2e-17
 Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 26/150 (17%)

Query: 74  FNNRYRVTRKLGWGHFSTVWF-TGSKTQVLV-----------SPQFPETALDEIKLLKCV 121
               +   R++G G F  V+F    +   +V           S +  +  + E++ L+ +
Sbjct: 13  PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 72

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRS 181
           R            +Q       C +      +V E    +   L+   K + +    + +
Sbjct: 73  RH--------PNTIQYRG----CYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAA 119

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           +    LQGL YLH+   +IH D+K  N+LL
Sbjct: 120 VTHGALQGLAYLHSH-NMIHRDVKAGNILL 148

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 3e-17
 Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 24/149 (16%)

Query: 75  NNRYRVTRKLGWGHFSTVW---FTGSKTQVLV------SPQFPETALDEIKLLKCVRDGD 125
             +Y    K+G G   TV+      +  +V +           E  ++EI +++  ++  
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-- 76

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   +V  LD      + G  + +V E L    L  +V      +    + ++ R+
Sbjct: 77  ------PNIVNYLD----SYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRE 124

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            LQ L +LH+  ++IH DIK +N+LL +D
Sbjct: 125 CLQALEFLHSN-QVIHRDIKSDNILLGMD 152

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 4e-17
 Identities = 30/175 (17%), Positives = 63/175 (36%), Gaps = 18/175 (10%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQV--LVSPQFPETALDEIKLLKCVRDGDVNDPY 130
              ++ + +G G F  V    + G+K  V  + +    +  L E  ++  +R        
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH------- 59

Query: 131 RERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQG 189
              +VQLL    +       + +V E +   +L+  +       +  + +      + + 
Sbjct: 60  -SNLVQLLG---VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 115

Query: 190 LNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAP 244
           + YL      +H D+   NVL+  D     +      E ++T     +    TAP
Sbjct: 116 MEYLE-GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 169

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 8e-17
 Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 28/169 (16%)

Query: 62  KGGYHPVKIG---MLFNNRYRVTRKLGWGHFSTVW---FTGSKTQVLV--------SPQF 107
           + G++  ++          YR  + +G G +  V       +  +V +        S  F
Sbjct: 1   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 60

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKL 165
            + A  E++LLK +R         E V+ LLD F       + T   +V   +G +L KL
Sbjct: 61  AKRAYRELRLLKHMRH--------ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKL 112

Query: 166 IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +   K+  +  + ++ ++ Q+L+GL Y+H    IIH D+KP N+ +  D
Sbjct: 113 M---KHEKLGEDRIQFLVYQMLKGLRYIH-AAGIIHRDLKPGNLAVNED 157

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.6 bits (185), Expect = 1e-16
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 74  FNNRYRVTRKLGWGHFSTVW-----FTGS-------KTQVLVSPQFPETALDEIKLLKCV 121
            ++RY +   LG+G  S V                 +  +   P F      E +    +
Sbjct: 5   LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 64

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRS 181
                       +V + D  +     G    +V E +    L+ IV      +  +    
Sbjct: 65  NH--------PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIE 115

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
           +I    Q LN+ H +  IIH D+KP N+++ 
Sbjct: 116 VIADACQALNFSH-QNGIIHRDVKPANIMIS 145

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 75.5 bits (185), Expect = 1e-16
 Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 33/157 (21%)

Query: 74  FNNRYRVTRKLGWGHFSTVW------------------FTGSKTQVLVSPQFPETALDEI 115
           F   Y     LG G  S V                     G         +  E  L E+
Sbjct: 1   FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 60

Query: 116 KLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGI 174
            +L+ V            ++QL D ++      T   +VF+ +    L   +  ++   +
Sbjct: 61  DILRKVSG-------HPNIIQLKDTYE----TNTFFFLVFDLMKKGELFDYL--TEKVTL 107

Query: 175 PLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             +  R I+R +L+ +  LH K  I+H D+KPEN+LL
Sbjct: 108 SEKETRKIMRALLEVICALH-KLNIVHRDLKPENILL 143

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 2e-16
 Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 13/150 (8%)

Query: 68  VKIGMLFNNRYRVTRKLGWGHFSTVW---FTGSKTQVLV-SPQFPETALDEIKLLKCVRD 123
           +K   + ++    ++ LG G    V       ++ +  +   Q    A  E++L      
Sbjct: 4   IKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ 63

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSI 182
                     +V+++D ++        + +V E + G  L   I     +         I
Sbjct: 64  -------CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 116

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLC 212
           ++ I + + YLH    I H D+KPEN+L  
Sbjct: 117 MKSIGEAIQYLH-SINIAHRDVKPENLLYT 145

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 2e-16
 Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 25/157 (15%)

Query: 71  GMLFN--NRYRVTRKLGWGHFSTVW---FTGSKTQVLV-------SPQFPETALDEIKLL 118
           G +F+   RY     +G G +  V       +K +V +          + +  L EIK+L
Sbjct: 1   GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 60

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGV-NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLE 177
              R         E ++ + D  +   +     V +V  ++G +L KL+   K + +  +
Sbjct: 61  LRFRH--------ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL---KTQHLSND 109

Query: 178 NVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           ++   + QIL+GL Y+H+   ++H D+KP N+LL   
Sbjct: 110 HICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTT 145

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 3e-16
 Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 26/161 (16%)

Query: 74  FNNRYRVTRKLGWGHFSTVW---------------FTGSKTQVLVSPQFPETALDEIKLL 118
             ++Y+V   LG G F +V+                   +               E+ LL
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN 178
           K V  G         V++LLD             ++ E            ++   +  E 
Sbjct: 62  KKVSSGFSG------VIRLLD----WFERPDSFVLILERPEPVQDLFDFITERGALQEEL 111

Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
            RS   Q+L+ + + H  C ++H DIK EN+L+ ++   +K
Sbjct: 112 ARSFFWQVLEAVRHCH-NCGVLHRDIKDENILIDLNRGELK 151

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.9 bits (183), Expect = 4e-16
 Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 24/155 (15%)

Query: 68  VKIGMLFNNRYRVTRKLGWGHFSTVWF---TGSKTQV----LVSPQFPETALDEIKLLKC 120
           +++G    NRYR+ RK+G G F  ++      +  +V                E K+ K 
Sbjct: 3   LRVG----NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKM 58

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVR 180
           ++            +  +     CG  G +  MV E+LG +L  L      R   L+ V 
Sbjct: 59  MQG--------GVGIPTIRW---CGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVL 106

Query: 181 SIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDE 215
            +  Q++  + Y+H     IH D+KP+N L+ + +
Sbjct: 107 LLADQMISRIEYIH-SKNFIHRDVKPDNFLMGLGK 140

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 7e-16
 Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 23/148 (15%)

Query: 77  RYRVTRKLGWGHFSTVW---FTGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVND 128
           +Y +   LG G F  V     T SK   +                EI +L   R      
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH----- 60

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
                ++ L +       +   + M+FE + G ++ + I  S +  +    + S + Q+ 
Sbjct: 61  ---RNILHLHE----SFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVC 112

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDE 215
           + L +LH    I H DI+PEN++     
Sbjct: 113 EALQFLH-SHNIGHFDIRPENIIYQTRR 139

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 8e-16
 Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 24/149 (16%)

Query: 77  RYRVTRKLGWGHFSTVW---FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDGD 125
            ++   K+G G +  V+      +   V +        +   P TA+ EI LLK +    
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-- 60

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   +V+LLD           + +VFE L  +L K +  S   GIPL  ++S + Q
Sbjct: 61  ------PNIVKLLD----VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +LQGL + H+   ++H D+KP+N+L+  +
Sbjct: 111 LLQGLAFCHSHR-VLHRDLKPQNLLINTE 138

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 1e-15
 Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 77  RYRVTRKLGWGHFSTVWF-----TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYR 131
            Y  T+ +G G F  V+      +G    +    Q       E+++++ +          
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH-------- 72

Query: 132 ERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLI--VKSKYRGIPLENVRSIIRQIL 187
             +V+L   F   G   +  ++ +V + +   + ++        + +P+  V+  + Q+ 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           + L Y+H+   I H DIKP+N+LL  D A +K
Sbjct: 133 RSLAYIHSF-GICHRDIKPQNLLLDPDTAVLK 163

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 2e-15
 Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 22/145 (15%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVND 128
              ++  +LG G F  VW         V           P+  L E  L+K ++      
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH----- 67

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
              +R+V+L             + ++ E +   +L+  +       + +  +  +  QI 
Sbjct: 68  ---QRLVRLYAVV-----TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLC 212
           +G+ ++  +   IH D++  N+L+ 
Sbjct: 120 EGMAFIEERN-YIHRDLRAANILVS 143

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (177), Expect = 2e-15
 Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 22/144 (15%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLV--------SPQFPETALDEIKLLKCVRDGDVN 127
            +  V +++G G F TV+       V V        +PQ  +   +E+ +L+  R     
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH---- 63

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
                 ++  +            + +V +    + L   +        +  +  I RQ  
Sbjct: 64  ----VNILLFMGYS-----TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 114

Query: 188 QGLNYLHTKCRIIHTDIKPENVLL 211
           QG++YLH K  IIH D+K  N+ L
Sbjct: 115 QGMDYLHAKS-IIHRDLKSNNIFL 137

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 1e-14
 Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 29/166 (17%)

Query: 65  YHPVKIG-MLFN--NRYRVTRKLGWGHFSTVWF---TGSKTQV--------LVSPQFPET 110
           ++ V++G   F    RY+  + +G G    V           V          +    + 
Sbjct: 3   FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62

Query: 111 ALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVK 168
           A  E+ L+KCV          + ++ LL+ F           V +V E++  NL ++I  
Sbjct: 63  AYRELVLMKCVN--------HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 112

Query: 169 SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
                +  E +  ++ Q+L G+ +LH    IIH D+KP N+++  D
Sbjct: 113 --QMELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSD 155

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 1e-14
 Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 26/192 (13%)

Query: 82  RKLGWGHFSTVW---FTGSKTQVLV---------SPQFPETALDEIKLLKCVRDGDVNDP 129
            +LG G+F +V    +   K Q+ V              E  + E +++  +        
Sbjct: 15  IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD------- 67

Query: 130 YRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQG 189
               +V+L+   +        + +V E+ G   L   +  K   IP+ NV  ++ Q+  G
Sbjct: 68  -NPYIVRLIGVCQ-----AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 121

Query: 190 LNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYS 249
           + YL  K   +H D+   NVLL        +    +  L A             P++ Y+
Sbjct: 122 MKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 180

Query: 250 ELSRRMSKNKKK 261
                  K   +
Sbjct: 181 PECINFRKFSSR 192

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 1e-14
 Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 17/147 (11%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDG 124
           ++Y    K+G G F  V+      +  +V +           FP TAL EIK+L+ ++  
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
           +V +                      + +VF+   H+L  L+     +   L  ++ +++
Sbjct: 70  NVVNLIE----ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQ 124

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLL 211
            +L GL Y+H + +I+H D+K  NVL+
Sbjct: 125 MLLNGLYYIH-RNKILHRDMKAANVLI 150

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 70.5 bits (172), Expect = 2e-14
 Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 23/148 (15%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQV---------LVSPQFPETALDEIKLLKCVRD 123
           N + V R +G G F  V+      +             +   Q    AL+E  +L  V  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
           GD        +V +             +  + +++    L   +         + +R   
Sbjct: 64  GDC-----PFIVCMSY----AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD-MRFYA 113

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLL 211
            +I+ GL ++H +  +++ D+KP N+LL
Sbjct: 114 AEIILGLEHMHNRF-VVYRDLKPANILL 140

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 69.9 bits (170), Expect = 2e-14
 Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 24/149 (16%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLV----------SPQFPETALDEIKLLKCVRDGD 125
            +Y    K+G G +  V+   +                    P T + EI +LK ++   
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH-- 59

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   +V+L D           + +VFE L  +L KL+   +  G+     +S + Q
Sbjct: 60  ------SNIVKLYD----VIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQ 108

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +L G+ Y H   R++H D+KP+N+L+  +
Sbjct: 109 LLNGIAYCH-DRRVLHRDLKPQNLLINRE 136

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 2e-14
 Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 20/146 (13%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVND 128
           +     +++G G F  V       +  V            E  ++E +++  +       
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH----- 59

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
               ++VQL        +    +C+VFE + H  L   ++++      E +  +   + +
Sbjct: 60  ---PKLVQLYG----VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 112

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVD 214
           G+ YL   C +IH D+   N L+  +
Sbjct: 113 GMAYLEEAC-VIHRDLAARNCLVGEN 137

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 69.9 bits (170), Expect = 2e-14
 Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 20/161 (12%)

Query: 65  YHPVKIGMLFNNRYRVTRKLGWGHFSTVWF---TGSKTQV---LVSPQFPETALDEIKLL 118
           Y    +     + Y++ RKLG G +S V+      +  +V   ++ P   +    EIK+L
Sbjct: 24  YESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKIL 83

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN 178
           + +R           ++ L D  K          +VFE + +   K      Y+ +   +
Sbjct: 84  ENLR-------GGPNIITLADIVK--DPVSRTPALVFEHVNNTDFK----QLYQTLTDYD 130

Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           +R  + +IL+ L+Y H+   I+H D+KP NV++  +  +++
Sbjct: 131 IRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR 170

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 5e-14
 Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 22/148 (14%)

Query: 77  RYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRER--- 133
            ++  + LG G FSTV       + L + +  E A+  ++    +++  V    RER   
Sbjct: 9   DFKFGKILGEGSFSTVV----LARELATSR--EYAIKILEKRHIIKENKVPYVTRERDVM 62

Query: 134 -------VVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
                   V+L         +   +        +  L   ++ K         R    +I
Sbjct: 63  SRLDHPFFVKLYF----TFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEI 117

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +  L YLH K  IIH D+KPEN+LL  D
Sbjct: 118 VSALEYLHGKG-IIHRDLKPENILLNED 144

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 6e-14
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 28/156 (17%)

Query: 78  YRVTRKLGWGHFSTVW---FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDGDV 126
           Y V   +G G +              ++         +    +  + E+ LL+ ++    
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH--- 62

Query: 127 NDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPL--ENVRSII 183
                  +V+  D         T + +V E   G +L  +I K       L  E V  ++
Sbjct: 63  -----PNIVRYYDRI--IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 115

Query: 184 RQILQGLNYLHTKC----RIIHTDIKPENVLLCVDE 215
            Q+   L   H +      ++H D+KP NV L   +
Sbjct: 116 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ 151

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 67.9 bits (165), Expect = 7e-14
 Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 20/144 (13%)

Query: 75  NNRYRVTRKLGWGHFSTVW---FTGSKTQVLV----SPQFPETALDEIKLLKCVRDGDVN 127
              Y+V R++G G F  ++      +  QV +             DE +  K +      
Sbjct: 4   GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAG---- 59

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
                 +  +       G  G H  +V ++LG +L  L+     R   ++ V    +Q+L
Sbjct: 60  ---CTGIPNVYY----FGQEGLHNVLVIDLLGPSLEDLL-DLCGRKFSVKTVAMAAKQML 111

Query: 188 QGLNYLHTKCRIIHTDIKPENVLL 211
             +  +H +  +++ DIKP+N L+
Sbjct: 112 ARVQSIH-EKSLVYRDIKPDNFLI 134

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.3 bits (166), Expect = 8e-14
 Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 32/191 (16%)

Query: 36  SHDEEENENKQFSSDEDEQEDPNDYCKGGYHPVKIGMLFNNRYRVTRKLGWGHFSTVWF- 94
               E+   K+F +   E +    +     +  ++     +++   + LG G F  V   
Sbjct: 7   KKGSEQESVKEFLAKAKE-DFLKKWETPSQNTAQL-----DQFDRIKTLGTGSFGRVMLV 60

Query: 95  ----TGS-------KTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI 143
               +G+         Q +V  +  E  L+E ++L+ V            +V+L   FK 
Sbjct: 61  KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF--------PFLVKLEFSFKD 112

Query: 144 CGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTD 203
                +++ MV E +    +   ++ +       + R    QI+    YLH    +I+ D
Sbjct: 113 N----SNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLH-SLDLIYRD 166

Query: 204 IKPENVLLCVD 214
           +KPEN+L+   
Sbjct: 167 LKPENLLIDQQ 177

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.1 bits (163), Expect = 2e-13
 Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 26/152 (17%)

Query: 76  NRYRVTRKLGWGHFSTVW----FTGSKTQVLV---------SPQFPETALDEIKLLKCVR 122
           +  ++ + +G G F  V         K ++ V         + +     L E  ++    
Sbjct: 26  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 85

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSI 182
                      V+ L           T V ++ E + +  L   ++       +  +  +
Sbjct: 86  H--------PNVIHLEG----VVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 133

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +R I  G+ YL      +H D+   N+L+  +
Sbjct: 134 LRGIAAGMKYLADMN-YVHRDLAARNILVNSN 164

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.2 bits (161), Expect = 3e-13
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 26/149 (17%)

Query: 74  FNNRYRVTRKLGWGHFSTVW---FTGSKTQVLV-------SPQFPETALDEIKLLKCVRD 123
             + Y     LG G FS V       ++  V +             +  +EI +L  ++ 
Sbjct: 7   IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH 66

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSI 182
                     +V L D       +G H+ ++ + V G  L   IV+  +      +   +
Sbjct: 67  --------PNIVALDD----IYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRL 112

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
           I Q+L  + YLH    I+H D+KPEN+L 
Sbjct: 113 IFQVLDAVKYLH-DLGIVHRDLKPENLLY 140

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 4e-13
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 27/149 (18%)

Query: 76  NRYRVTRKLGWGHFSTVW----FTGSKTQVLV---------SPQFPETALDEIKLLKCVR 122
            R  + R +G G F  V      +     + V         S    E  L E   ++   
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 123 DGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSI 182
                      +V+L+            V ++ E+     L+  ++ +   + L ++   
Sbjct: 67  H--------PHIVKLIGVI-----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY 113

Query: 183 IRQILQGLNYLHTKCRIIHTDIKPENVLL 211
             Q+   L YL    R +H DI   NVL+
Sbjct: 114 AYQLSTALAYLE-SKRFVHRDIAARNVLV 141

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 4e-13
 Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 44/171 (25%)

Query: 76  NRYRVTRKLGWGHFSTVW------FTGSKTQVLV---------SPQFPETALDEIKLLKC 120
           NR    + LG G F  V          S   + V              E  + E+K+L  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYR------- 172
           + +          +V LL         G    ++ E     +LL  + + +         
Sbjct: 83  LGN-------HMNIVNLLG----ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 131

Query: 173 ---------GIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
                     + LE++ S   Q+ +G+ +L +K   IH D+   N+LL   
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG 181

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 5e-13
 Identities = 22/141 (15%), Positives = 52/141 (36%), Gaps = 20/141 (14%)

Query: 78  YRVTRKLGWGHFSTVWFTGSKTQVLV-------SPQFPETALDEIKLLKCVRDGDVNDPY 130
               ++LG G F  V +   + Q  V            +  ++E K++  +         
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH------- 58

Query: 131 RERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGL 190
            E++VQL             + ++ E + +  L   ++        + +  + + + + +
Sbjct: 59  -EKLVQLYG----VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 113

Query: 191 NYLHTKCRIIHTDIKPENVLL 211
            YL +K   +H D+   N L+
Sbjct: 114 EYLESKQ-FLHRDLAARNCLV 133

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 8e-13
 Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 32/165 (19%)

Query: 66  HPVKIGMLFNNRYRVTRKLGWGHFSTVW--------FTG--------SKTQVLVSPQFPE 109
           H  K+G+     + + + LG G +  V+         TG         K  ++   +  E
Sbjct: 17  HAEKVGI---ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE 73

Query: 110 TALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKS 169
               E ++L+ +R           +V L   F+      T + ++ + +    L   +  
Sbjct: 74  HTRTERQVLEHIRQSPF-------LVTLHYAFQ----TETKLHLILDYINGGELFTHLSQ 122

Query: 170 KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           + R      V+  + +I+  L +LH K  II+ DIK EN+LL  +
Sbjct: 123 RER-FTEHEVQIYVGEIVLALEHLH-KLGIIYRDIKLENILLDSN 165

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 1e-12
 Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 49/176 (27%)

Query: 76  NRYRVTRKLGWGHFSTVW--------FTGSKTQVLV-------SPQFPETALDEIKLLKC 120
                 + LG G F  V          TG   QV V            E  + E+K++  
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRG------ 173
           +          E +V LL            + ++FE     +LL  +   + +       
Sbjct: 97  LGS-------HENIVNLLG----ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIE 145

Query: 174 ---------------IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
                          +  E++     Q+ +G+ +L  K   +H D+   NVL+   
Sbjct: 146 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNVLVTHG 200

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.7 bits (157), Expect = 1e-12
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 26/146 (17%)

Query: 78  YRVTRKLGWGHFSTVW-----FTGS-------KTQVLVSPQFPETALDEIKLLKCVRDGD 125
           +++ R LG G F  V        G        K +++V  +  E   DE  +L  V    
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--- 62

Query: 126 VNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQ 185
                   ++++         +   + M+ + +    L  +++   R  P    +    +
Sbjct: 63  -----HPFIIRMWG----TFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAE 112

Query: 186 ILQGLNYLHTKCRIIHTDIKPENVLL 211
           +   L YLH+K  II+ D+KPEN+LL
Sbjct: 113 VCLALEYLHSKD-IIYRDLKPENILL 137

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 1e-12
 Identities = 25/151 (16%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQV-LVSPQFPETALDEIKLLKCVRDGDVNDPYR 131
               +   +G G F  VW   + G +  V + S +   +   E ++ + V     N    
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN---- 58

Query: 132 ERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGL 190
             ++  +          T + +V +     +L   + +     + +E +  +      GL
Sbjct: 59  --ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGL 113

Query: 191 NYLHTKC-------RIIHTDIKPENVLLCVD 214
            +LH +         I H D+K +N+L+  +
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 144

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 1e-12
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 20/146 (13%)

Query: 76  NRYRVTRKLGWGHFSTVW--FTGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVND 128
              R+  KLG G F  VW       T+V +         PE  L E +++K +R      
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH----- 71

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
              E++VQL     +      ++   + +   +LL  +     + + L  +  +  QI  
Sbjct: 72  ---EKLVQLYA---VVSEEPIYIVTEY-MSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 124

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVD 214
           G+ Y+      +H D++  N+L+  +
Sbjct: 125 GMAYVERMN-YVHRDLRAANILVGEN 149

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (155), Expect = 2e-12
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 25/150 (16%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQVLV--------SPQFPETALDEIKLLKCVRDG 124
            +Y    K+G G + TV+      +   V +            P +AL EI LLK ++  
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 125 DVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIR 184
           ++   +                +   + +VFE    +L K          P E V+S + 
Sbjct: 62  NIVRLHD------------VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLF 108

Query: 185 QILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           Q+L+GL + H    ++H D+KP+N+L+  +
Sbjct: 109 QLLKGLGFCH-SRNVLHRDLKPQNLLINRN 137

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.0 bits (155), Expect = 2e-12
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 22/145 (15%)

Query: 76  NRYRVTRKLGWGHFSTVW---FTGSKTQVLV-----SPQFPETALDEIKLLKCVRDGDVN 127
               +  KLG G +  V+   +      V V          E  L E  ++K ++     
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---- 72

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKYRGIPLENVRSIIRQI 186
                 +VQLL              ++ E +   NLL  + +   + +    +  +  QI
Sbjct: 73  ----PNLVQLLG----VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 124

Query: 187 LQGLNYLHTKCRIIHTDIKPENVLL 211
              + YL  K   IH D+   N L+
Sbjct: 125 SSAMEYLE-KKNFIHRDLAARNCLV 148

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 2e-12
 Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 29/158 (18%)

Query: 72  MLFNNRYRVTRKLGWGHFSTVW------FTGSKTQV---------LVSPQFPETALDEIK 116
           ++     R+  KLG G F  V        +G    V         L  P+  +  + E+ 
Sbjct: 4   LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63

Query: 117 LLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPL 176
            +  +            +++L             + MV E+     L   ++       L
Sbjct: 64  AMHSLDH--------RNLIRLYGVVL-----TPPMKMVTELAPLGSLLDRLRKHQGHFLL 110

Query: 177 ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
             +     Q+ +G+ YL +K   IH D+   N+LL   
Sbjct: 111 GTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATR 147

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 60.6 bits (146), Expect = 8e-12
 Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 3/136 (2%)

Query: 78  YRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQL 137
             + + +G G  S V+   S+       +F +      K +K  RD          +   
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSA 61

Query: 138 LDDFKI-CGVNGTHVCMVFEVLGHNLL-KLIVKSKYRGIPLENVRSIIRQILQGLNYLHT 195
            ++F+    + G  V  V+   G+ +L +LI   +   + +EN   ++  IL+ +   + 
Sbjct: 62  RNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY- 120

Query: 196 KCRIIHTDIKPENVLL 211
              I+H D+   NVL+
Sbjct: 121 HRGIVHGDLSQYNVLV 136

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 9e-12
 Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 28/151 (18%)

Query: 78  YRVTRKLGWGHFSTVW-----FTGSKTQVLV---------SPQFPETALDEIKLLKCVRD 123
           ++  + LG G F TV+       G K ++ V         SP+  +  LDE  ++  V +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
                     V +LL       +  T   +   +    LL  + + K   I  + + +  
Sbjct: 71  --------PHVCRLLG----ICLTSTVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWC 117

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            QI +G+NYL  + R++H D+   NVL+   
Sbjct: 118 VQIAKGMNYLEDR-RLVHRDLAARNVLVKTP 147

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 1e-11
 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 29/175 (16%)

Query: 82  RKLGWGHFSTVW---FTGSKTQVLV-----------SPQFPETALDEIKLLKCVRDGDVN 127
             LG G F+TV+      +   V +                 TAL EIKLL+ +      
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS----- 58

Query: 128 DPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQIL 187
                 ++ LLD       + +++ +VF+ +  +L  +I  +     P   +++ +   L
Sbjct: 59  ---HPNIIGLLD----AFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH-IKAYMLMTL 110

Query: 188 QGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKLPVSFCST 242
           QGL YLH +  I+H D+KP N+LL  +   +K       +   + ++       T
Sbjct: 111 QGLEYLH-QHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYTHQVVT 163

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 2e-11
 Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 28/165 (16%)

Query: 62  KGGYHPVKIGML---FNNRYRVTRKLGWGHFSTVWF-TGSKTQVLV----------SPQF 107
           +  ++  ++         RY+    +G G + +V     +KT + V          S   
Sbjct: 1   RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH 60

Query: 108 PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI--CGVNGTHVCMVFEVLGHNLLKL 165
            +    E++LLK ++         E V+ LLD F           V +V  ++G +L  +
Sbjct: 61  AKRTYRELRLLKHMK--------HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 112

Query: 166 IVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVL 210
           +   K + +  ++V+ +I QIL+GL Y+H+    IH D+KP N+ 
Sbjct: 113 V---KCQKLTDDHVQFLIYQILRGLKYIHSADI-IHRDLKPSNLA 153

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 4e-11
 Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 29/171 (16%)

Query: 74  FNNRYRVTRKLGWGHFSTVW---------------FTGSKTQVLVSPQFPETALDEIKLL 118
            ++ Y    +LG G F+ V                    +T+        E    E+ +L
Sbjct: 8   VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67

Query: 119 KCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLEN 178
           K ++           V+ L +       N T V ++ E++    L   +  K   +  E 
Sbjct: 68  KEIQH--------PNVITLHE----VYENKTDVILILELVAGGELFDFLAEK-ESLTEEE 114

Query: 179 VRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA 229
               ++QIL G+ YLH+   I H D+KPEN++L         + +    LA
Sbjct: 115 ATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 4e-11
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 30/163 (18%)

Query: 69  KIGMLFNNRYRVTRKLGWGHFSTVW-----FTGS-------KTQVLVSPQFPETALDEIK 116
           K+ M   N +   + LG G F  V       TG        + +V+++       + E +
Sbjct: 1   KVTM---NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57

Query: 117 LLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPL 176
           +L+  R           +  L    K        +C V E      L   +  +      
Sbjct: 58  VLQNTR--------HPFLTAL----KYAFQTHDRLCFVMEYANGGELFFHLSRERV-FTE 104

Query: 177 ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
           E  R    +I+  L YLH    +++ DIK EN++L   +  +K
Sbjct: 105 ERARFYGAEIVSALEYLH-SRDVVYRDIKLENLMLD-KDGHIK 145

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 5e-11
 Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 31/158 (19%)

Query: 73  LFNNRYRVT---RKLGWGHFSTVW---FTGSKTQVLV----------SPQFPETALDEIK 116
           ++ +R  +T   ++LG G+F TV    +   K    V           P   +  L E  
Sbjct: 1   VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 60

Query: 117 LLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPL 176
           +++ + +          +V+++   +          +V E+     L   ++ + R +  
Sbjct: 61  VMQQLDN--------PYIVRMIGICEA-----ESWMLVMEMAELGPLNKYLQ-QNRHVKD 106

Query: 177 ENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           +N+  ++ Q+  G+ YL      +H D+   NVLL   
Sbjct: 107 KNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQ 143

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 5e-11
 Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 25/147 (17%)

Query: 76  NRYRVTRKLGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRER- 133
             + + + LG G F  V+     KT           A+  +K    + D DV     E+ 
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFF-------AIKALKKDVVLMDDDVECTMVEKR 54

Query: 134 ----------VVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSII 183
                     +  +            ++  V E L    L   ++S ++   L       
Sbjct: 55  VLSLAWEHPFLTHMFC----TFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYA 109

Query: 184 RQILQGLNYLHTKCRIIHTDIKPENVL 210
            +I+ GL +LH    I++ D+K +N+L
Sbjct: 110 AEIILGLQFLH-SKGIVYRDLKLDNIL 135

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 8e-10
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 26/162 (16%)

Query: 76  NRYRVTRKLGWGHFSTVWF-TGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRE-R 133
           +R  + + LG G F  V              +  + A+  +K      + D++D   E  
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDLISEME 70

Query: 134 VVQLLDDFKI------CGVNGTHVCMVFE-VLGHNLLKLIVKSKYRG------------- 173
           +++++   K              + ++ E     NL + +   +  G             
Sbjct: 71  MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 130

Query: 174 -IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
            +  +++ S   Q+ +G+ YL    + IH D+   NVL+  D
Sbjct: 131 QLSSKDLVSCAYQVARGMEYLA-SKKCIHRDLAARNVLVTED 171

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 1e-09
 Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 39/166 (23%)

Query: 76  NRYRVTRKLGWGHFSTVW-----FTGSKTQVLV-------SPQFPETALDEIKLLKCVRD 123
           N  +    +G G+F  V        G +    +       S         E+++L  +  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 124 GDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE-VLGHNLLKLIVKSKY----------- 171
                     ++ LL   +    +  ++ +  E     NLL  + KS+            
Sbjct: 70  -------HPNIINLLGACE----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 118

Query: 172 ---RGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
                +  + +      + +G++YL  K + IH D+   N+L+  +
Sbjct: 119 STASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGEN 163

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 2e-09
 Identities = 27/177 (15%), Positives = 49/177 (27%), Gaps = 51/177 (28%)

Query: 76  NRYRVTRKLGWGHFSTVW--------FTGSKTQVLV-------SPQFPETALDEIKLLKC 120
           N     R +G G F  V+             T V V       S         E  L+  
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRG------ 173
             + ++                     G  +C++FE +   +L + +             
Sbjct: 73  FDNPNIVKLLG------------VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120

Query: 174 ----------------IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
                           +       I RQ+  G+ YL  + + +H D+   N L+  +
Sbjct: 121 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS-ERKFVHRDLATRNCLVGEN 176

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 3e-09
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 29/163 (17%)

Query: 76  NRYRVTRKLGWGHFSTVWFTGSKTQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVV 135
           +R ++ + LG G F  V     +       +        +K+LK       +      + 
Sbjct: 13  DRLKLGKPLGRGAFGQVI----EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 68

Query: 136 QLLDD---------FKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRG------------- 173
            L+              C   G  + ++ E      L   ++SK                
Sbjct: 69  ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 128

Query: 174 --IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
             + LE++     Q+ +G+ +L ++ + IH D+   N+LL   
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK 170

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 3e-09
 Identities = 22/153 (14%), Positives = 52/153 (33%), Gaps = 27/153 (17%)

Query: 76  NRYRVTRKLGWGHFSTVW-----FTGSKTQVLV---------SPQFPETALDEIKLLKCV 121
           +     + +G G F  V+      +  K +V V         + +     L E  ++   
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 122 RDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRS 181
                       +++L             + ++ E + +  L   ++ K     +  +  
Sbjct: 67  S--------HHNIIRLEG----VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVG 114

Query: 182 IIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD 214
           ++R I  G+ YL      +H D+   N+L+  +
Sbjct: 115 MLRGIAAGMKYLANMN-YVHRDLAARNILVNSN 146

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 6e-08
 Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 25/146 (17%)

Query: 82  RKLGWGHFSTVW----FTGSKTQVLV---------SPQFPETALDEIKLLKCVRDGDVND 128
             +G GHF  V+          ++                   L E  ++K         
Sbjct: 33  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH----- 87

Query: 129 PYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQ 188
                V+ LL    IC  +     +V   + H  L+  ++++     ++++     Q+ +
Sbjct: 88  ---PNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141

Query: 189 GLNYLHTKCRIIHTDIKPENVLLCVD 214
           G+ +L +K + +H D+   N +L   
Sbjct: 142 GMKFLASK-KFVHRDLAARNCMLDEK 166

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 2e-07
 Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 38/168 (22%)

Query: 76  NRYRVTRKLGWGHFSTVW--------FTGSKTQVLV-------SPQFPETALDEIKLLKC 120
            +  ++R+LG G F  V+            +T+V +       S +     L+E  ++K 
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 121 VRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRG------- 173
                V                     G    ++ E++    LK  ++S           
Sbjct: 80  FNCHHVVRLLG------------VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 127

Query: 174 --IPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK 219
               L  +  +  +I  G+ YL+   + +H D+   N ++  ++  VK
Sbjct: 128 APPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVA-EDFTVK 173

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	284
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.98
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.98
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.98
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.98
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.82
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.99
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.52
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.3
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.03
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	94.54
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	91.09

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-36  Score=255.07  Aligned_cols=172  Identities=23%  Similarity=0.336  Sum_probs=139.4

Q ss_pred             cceeccce-EEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         71 GMLFNNRY-RVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        71 ~~~~~~~y-~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      |...+++| ++.+.||+|+||+||+|.++     .++|....      ..+.+.+|+++|+.++|        +||++++
T Consensus         3 g~~~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~~~   74 (270)
T d1t4ha_           3 GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH--------PNIVRFY   74 (270)
T ss_dssp             EECTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC--------TTBCCEE
T ss_pred             CcCCCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC--------CCeeeEE
Confidence            44455677 77889999999999999873     24443221      12456789999999998        7799999


Q ss_pred             ccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCC--cEecCCCCCCeeEeeCC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCR--IIHTDIKPENVLLCVDE  215 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~g--ivHrDiKp~NIll~~~~  215 (284)
                      +++.........+|+||||+ +|+|.+.+.+..  .+++..++.++.||+.||.|||++ +  ||||||||+|||++.++
T Consensus        75 ~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~  151 (270)
T d1t4ha_          75 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPT  151 (270)
T ss_dssp             EEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTT
T ss_pred             EEEeeccccCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCC
Confidence            98875555678899999999 678888887654  599999999999999999999999 8  99999999999996656


Q ss_pred             CcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        216 ARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       216 ~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +.++|+|||+|.....  ....+.+||+.|+|||++.++.
T Consensus       152 ~~~Kl~DFGla~~~~~--~~~~~~~GT~~Y~aPE~~~~~~  189 (270)
T d1t4ha_         152 GSVKIGDLGLATLKRA--SFAKAVIGTPEFMAPEMYEEKY  189 (270)
T ss_dssp             SCEEECCTTGGGGCCT--TSBEESCSSCCCCCGGGGGTCC
T ss_pred             CCEEEeecCcceeccC--CccCCcccCccccCHHHhCCCC
Confidence            8999999999975433  2344678999999999997654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-36  Score=261.33  Aligned_cols=162  Identities=23%  Similarity=0.373  Sum_probs=137.5

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..    ...+.+.+|+.+++.++|        +||++++++|.    
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~~~~~~~----   87 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN--------PNIVNYLDSYL----   87 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEE----
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCC--------CCEeeEeEEEE----
Confidence            47999999999999999999763     3555432    233568899999999998        77999999887    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||+ +|+|.+.+...   .+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+|||+
T Consensus        88 ~~~~~~ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~-~~vkl~DFG~  162 (293)
T d1yhwa1          88 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMD-GSVKLTDFGF  162 (293)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT-CCEEECCCTT
T ss_pred             ECCEEEEEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCcHHHeEECCC-CcEeeccchh
Confidence            678899999999 66777665543   499999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |.............+||+.|+|||++.+.
T Consensus       163 a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~  191 (293)
T d1yhwa1         163 CAQITPEQSKRSTMVGTPYWMAPEVVTRK  191 (293)
T ss_dssp             CEECCSTTCCBCCCCSCGGGCCHHHHSSS
T ss_pred             heeeccccccccccccCCCccChhhhcCC
Confidence            98776655566678899999999999765

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=259.19  Aligned_cols=164  Identities=26%  Similarity=0.412  Sum_probs=135.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..     ...+.+.+|+.+++.++|        +||+++++++.   
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~H--------pnIv~~~~~~~---   73 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH--------ENVVKFYGHRR---   73 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCC--------TTBCCEEEEEE---
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCC--------CCEeeEeeeec---
Confidence            57999999999999999999863     3555532     234568899999999998        77999999887   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....+||||||+ +|+|.+.+...  ..+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+|||
T Consensus        74 -~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~-~IiHrDiKp~NILl~~~-~~~KL~DFG  148 (271)
T d1nvra_          74 -EGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDER-DNLKISDFG  148 (271)
T ss_dssp             -ETTEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTT-CCEEECCCT
T ss_pred             -cCceeEEEEeccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc-CCccCcccHHHEEECCC-CCEEEccch
Confidence             778999999999 67888877543  3599999999999999999999999 99999999999999544 799999999


Q ss_pred             chhHhhhCC--CCCCcccCCCCccchhhhhhcc
Q psy16752        225 ATELAATGH--KLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       225 ~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|.......  ....+.+||+.|+|||++.+.-
T Consensus       149 ~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~  181 (271)
T d1nvra_         149 LATVFRYNNRERLLNKMCGTLPYVAPELLKRRE  181 (271)
T ss_dssp             TCEECEETTEECCBCCCCSCGGGSCTHHHHCSS
T ss_pred             hheeeccCCccccccceeeCcCccCHhHhcCCC
Confidence            998765433  2344678999999999997654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=259.29  Aligned_cols=163  Identities=19%  Similarity=0.336  Sum_probs=134.9

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ..++|++++.||+|+||+||+|.++     +++|+..     .....+.+|+.+|+.++|        |||++++++|. 
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~H--------pnIv~l~~~~~-   74 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS--------PYIVGFYGAFY-   74 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCC--------TTBCCEEEEEE-
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCC--------CCCCcEEEEEE-
Confidence            3568999999999999999999863     3555432     123457889999999988        77999999887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                         ....+|+||||+ +|+|.+.+.+..  .+++..++.++.||+.||.|||+ . ||+||||||+||||+. ++.++|+
T Consensus        75 ---~~~~~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~-~IiHRDiKP~NILl~~-~~~vkl~  147 (322)
T d1s9ja_          75 ---SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH-KIMHRDVKPSNILVNS-RGEIKLC  147 (322)
T ss_dssp             ---CSSEEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH-CCCCSCCSGGGEEECT-TCCEEEC
T ss_pred             ---ECCEEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhC-CEEccccCHHHeeECC-CCCEEEe
Confidence               788999999999 668888877654  59999999999999999999996 6 8999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|......  ...+.+||++|+|||++.+.
T Consensus       148 DFGla~~~~~~--~~~~~~GT~~Y~APEvl~~~  178 (322)
T d1s9ja_         148 DFGVSGQLIDS--MANSFVGTRSYMSPERLQGT  178 (322)
T ss_dssp             CCCCCHHHHHH--TC---CCSSCCCCHHHHHCS
T ss_pred             eCCCccccCCC--ccccccCCccccCchHHcCC
Confidence            99999876553  23467999999999999764

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-35  Score=258.68  Aligned_cols=163  Identities=22%  Similarity=0.330  Sum_probs=140.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..       .....+.+|+.+|+.++|        ++|++++++|. 
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~h--------p~Iv~l~~~~~-   75 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH--------PFLTALKYAFQ-   75 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC--------TTBCCEEEEEE-
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCC--------CCEEEEEeeec-
Confidence            46999999999999999999873     3555532       234567899999999988        77999999888 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +|+|...+.+..  .+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+|
T Consensus        76 ---~~~~~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NILl~~~-g~vkl~D  148 (337)
T d1o6la_          76 ---THDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKD-GHIKITD  148 (337)
T ss_dssp             ---CSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTT-SCEEECC
T ss_pred             ---cccccccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhc-CccccccCHHHeEecCC-CCEEEee
Confidence               889999999999 778888877654  599999999999999999999999 99999999999999555 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||+|+..........+.+||+.|+|||++.+.
T Consensus       149 FG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~  180 (337)
T d1o6la_         149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDN  180 (337)
T ss_dssp             CTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred             cccccccccCCcccccceeCHHHhhhhhccCC
Confidence            99998766655666678999999999999765

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-35  Score=250.08  Aligned_cols=162  Identities=23%  Similarity=0.391  Sum_probs=136.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEec-------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||+||+|.++     +++|+.       ......+.+|+.+++.++|        |||+++++++. 
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~~~~~~~-   76 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH--------PNILRLYGYFH-   76 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC--------TTBCCEEEEEE-
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCC--------CCCCeEEEEEE-
Confidence            46999999999999999999873     355543       2234567889999999988        77999999887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +|+|.+.+....  .+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+|
T Consensus        77 ---~~~~~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~-~ivHrDiKp~Nill~~~-~~~kl~D  149 (263)
T d2j4za1          77 ---DATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSA-GELKIAD  149 (263)
T ss_dssp             ---CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT-SCEEECC
T ss_pred             ---ECCEEEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CeeeeeeccccceecCC-CCEeecc
Confidence               788999999999 678888887654  499999999999999999999999 99999999999999554 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+|......  .....+||+.|+|||++.+.-
T Consensus       150 FG~a~~~~~~--~~~~~~Gt~~Y~APE~~~~~~  180 (263)
T d2j4za1         150 FGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRM  180 (263)
T ss_dssp             CCSCSCCCCC--CCEETTEEGGGCCHHHHTTCC
T ss_pred             cceeeecCCC--cccccCCCCcccCHHHHcCCC
Confidence            9998755432  344678999999999998754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-36  Score=256.00  Aligned_cols=164  Identities=23%  Similarity=0.354  Sum_probs=135.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      +.|++++.||+|+||+||+|.++     +++|+..    ...+.+.+|+.+++.++|        +||+++++++.    
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H--------pnIv~l~~~~~----   79 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH--------PNIVKLLDAFY----   79 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCC--------TTBCCEEEEEE----
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC--------CCCCeEEEEEe----
Confidence            35999999999999999999873     3555432    234668899999999998        77999999887    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                      ....+|+||||+ +|+|.+.+.+.. +.+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+|||+
T Consensus        80 ~~~~~~lvmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~-~ivHrDiKp~NIll~~~-~~~Kl~DFG~  156 (288)
T d2jfla1          80 YENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLD-GDIKLADFGV  156 (288)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT-SCEEECCCTT
T ss_pred             eCCeEEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CEEEeecChhheeECCC-CCEEEEechh
Confidence            778899999999 667777665543 4599999999999999999999999 99999999999999654 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |...........+.+||+.|+|||++...
T Consensus       157 a~~~~~~~~~~~~~~Gt~~y~APE~l~~~  185 (288)
T d2jfla1         157 SAKNTRTIQRRDSFIGTPYWMAPEVVMCE  185 (288)
T ss_dssp             CEECHHHHHHHTCCCSCCTTCCHHHHTTC
T ss_pred             hhccCCCcccccccccccccCCHHHHhhc
Confidence            87554433334467899999999998543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-35  Score=251.61  Aligned_cols=163  Identities=23%  Similarity=0.310  Sum_probs=134.2

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEec-------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS-------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||+||+|.++     +++|+.       ....+.+.+|+.++++++|        +||+++++++. 
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~l~~~~~-   78 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH--------PFFVKLYFTFQ-   78 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCS--------TTBCCEEEEEE-
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCC--------CCeeEEEEEEE-
Confidence            46999999999999999999763     356653       2233567899999999998        77999999887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +|+|.+.+....  .+++..++.++.||+.||.|||++ |||||||||+|||++. ++.++|+|
T Consensus        79 ---~~~~~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~NIll~~-~~~vkl~D  151 (288)
T d1uu3a_          79 ---DDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNE-DMHIQITD  151 (288)
T ss_dssp             ---CSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TSCEEECC
T ss_pred             ---ECCEEEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccc-cEEcCcCCccccccCC-CceEEecc
Confidence               788999999999 678888777654  599999999999999999999999 9999999999999954 48999999


Q ss_pred             ccchhHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||+|+......  ....+.+||+.|+|||++.+.
T Consensus       152 FG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~  185 (288)
T d1uu3a_         152 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEK  185 (288)
T ss_dssp             CTTCEECC----------CCCCGGGCCHHHHHTC
T ss_pred             cccceecccCCcccccccccCCccccCceeeccC
Confidence            99998664332  233467899999999999765

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.6e-35  Score=253.94  Aligned_cols=165  Identities=23%  Similarity=0.412  Sum_probs=123.6

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .++|++.+.||+|+||+||+|.++     +++|+..     .....+.+|+.+++.++|        |||+++++++.  
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~H--------pnIv~l~~~~~--   77 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH--------PNIVALDDIYE--   77 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCC--------TTBCCEEEEEE--
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCC--------CCCCcEEEEEE--
Confidence            456999999999999999999763     3555532     223456789999999988        77999999887  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee--CCCcEEEE
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV--DEARVKTL  221 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~--~~~~v~l~  221 (284)
                        ....+||||||+ +|+|.+.+....  .+++..+..++.||+.||.|||++ |||||||||+|||+..  +++.++|+
T Consensus        78 --~~~~~~lvmE~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~Nil~~~~~~~~~vkl~  152 (307)
T d1a06a_          78 --SGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENLLYYSLDEDSKIMIS  152 (307)
T ss_dssp             --CSSEEEEEECCCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred             --ECCEEEEEEeccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhc-eeeeEEecccceeecccCCCceEEEe
Confidence              788999999999 688988887643  599999999999999999999999 9999999999999964  35789999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||+|...... ....+.+||+.|+|||++.+.-
T Consensus       153 DFG~a~~~~~~-~~~~~~~GT~~y~APE~~~~~~  185 (307)
T d1a06a_         153 DFGLSKMEDPG-SVLSTACGTPGYVAPEVLAQKP  185 (307)
T ss_dssp             CC-------------------CTTSCHHHHTTCC
T ss_pred             ccceeEEccCC-CeeeeeeeCccccCcHHHcCCC
Confidence            99999876544 3344678999999999997653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-35  Score=249.24  Aligned_cols=167  Identities=20%  Similarity=0.271  Sum_probs=122.8

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++++.||+|+||+||+|.++     +++|.....      .+.+.+|+.++++++|        |||+++++++.  
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~~~~~~~--   73 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH--------PNIVRYYDRII--   73 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCC--------TTBCCEEEEEE--
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCC--------CCEeeEEEEEE--
Confidence            46999999999999999999863     355543221      2347789999999988        77999998764  


Q ss_pred             ccCCeEEEEEeccC-CccHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhCCC-----cEecCCCCCCeeEeeCCC
Q psy16752        145 GVNGTHVCMVFEVL-GHNLLKLIVKS--KYRGIPLENVRSIIRQILQGLNYLHTKCR-----IIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       145 ~~~~~~~~iv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~g-----ivHrDiKp~NIll~~~~~  216 (284)
                      ......+||||||+ +|+|.+++.+.  ....+++..+..++.||+.||.|||++ +     ||||||||+|||++.+ +
T Consensus        74 ~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~~~~~~IiHrDiKp~NIll~~~-~  151 (269)
T d2java1          74 DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGK-Q  151 (269)
T ss_dssp             C----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHH-CC---------CCGGGEEECTT-S
T ss_pred             eCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCCCCEEeCcCchhhcCcCCC-C
Confidence            12455689999999 67888877643  234599999999999999999999997 6     9999999999999554 8


Q ss_pred             cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .++|+|||+|...........+.+||+.|+|||++.+.
T Consensus       152 ~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~  189 (269)
T d2java1         152 NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM  189 (269)
T ss_dssp             CEEECCHHHHHHC-----------CCCSCCCHHHHTTC
T ss_pred             cEEEeeccceeecccCCCccccCCCCcccCCHHHHcCC
Confidence            99999999999877666666678999999999999764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=9.2e-35  Score=256.32  Aligned_cols=165  Identities=21%  Similarity=0.350  Sum_probs=137.9

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++.+.||+|+||+||+|.++     +++|+....    .+.+.+|+.+++.++|        +||+++++++.    
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H--------pnIv~~~~~~~----   93 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH--------PTLVNLHDAFE----   93 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCC--------TTBCCEEEEEE----
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCC--------CCCCcEEEEEE----
Confidence            47999999999999999999863     355654332    2456789999999998        77999999887    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-CCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-EARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-~~~v~l~Dfg  224 (284)
                      ....+||||||+ +|+|.+.+.... ..+++..+..++.||+.||.|||++ |||||||||+|||++.+ .+.++|+|||
T Consensus        94 ~~~~~~ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHrDiKp~NIll~~~~~~~vkL~DFG  171 (350)
T d1koaa2          94 DDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFG  171 (350)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTSCCEEECCCT
T ss_pred             ECCEEEEEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhc-CCeeeeechhHeeeccCCCCeEEEeecc
Confidence            778999999999 678888876543 3599999999999999999999999 99999999999999654 4789999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|...... ....+.+||+.|+|||++.+.-
T Consensus       172 ~a~~~~~~-~~~~~~~gT~~Y~aPEv~~~~~  201 (350)
T d1koaa2         172 LTAHLDPK-QSVKVTTGTAEFAAPEVAEGKP  201 (350)
T ss_dssp             TCEECCTT-SCEEEECSCTTTCCHHHHHTCC
T ss_pred             hheecccc-cccceecCcccccCHHHHcCCC
Confidence            98765543 3344678999999999997653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-34  Score=250.46  Aligned_cols=158  Identities=22%  Similarity=0.312  Sum_probs=131.4

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      .|++++.||+|+||+||+|.++     +++|+....       .+.+.+|+.+++.++|        +||+++++++.  
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~H--------pnIv~~~~~~~--   85 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH--------PNTIQYRGCYL--   85 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEE--
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCC--------CCEeeEEEEEE--
Confidence            5999999999999999999762     355553322       1357789999999988        77999999887  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ....+|+||||+.++++..+.... ..+++..++.++.||+.||.|||++ |||||||||+||||+. ++.++|+|||
T Consensus        86 --~~~~~~iv~E~~~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~-~~~~Kl~DFG  160 (309)
T d1u5ra_          86 --REHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSE-PGLVKLGDFG  160 (309)
T ss_dssp             --ETTEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEET-TTEEEECCCT
T ss_pred             --ECCEEEEEEEecCCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEECC-CCCEEEeecc
Confidence              678899999999766665554443 3599999999999999999999999 9999999999999954 4899999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhh
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSR  253 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~  253 (284)
                      +|......    ...+||+.|+|||++.+
T Consensus       161 ~a~~~~~~----~~~~GT~~Y~APE~~~~  185 (309)
T d1u5ra_         161 SASIMAPA----NSFVGTPYWMAPEVILA  185 (309)
T ss_dssp             TCBSSSSB----CCCCSCGGGCCHHHHTT
T ss_pred             cccccCCC----CccccCccccCHHHHhc
Confidence            98755432    35689999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-34  Score=249.14  Aligned_cols=165  Identities=20%  Similarity=0.219  Sum_probs=138.3

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      ++|++.+.||+|+||+||+|.++     +++|+...   ..+.+.+|+.+|+.++|        +||+++++++.    .
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~H--------pnIv~~~~~~~----~   84 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH--------PNLVQLLGVCT----R   84 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC----S
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCC--------CCEecCCccEe----e
Confidence            47999999999999999999863     45665432   24567899999999998        77999999876    7


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ...+||||||+ +|++.+.+.......+++..+..++.||+.||.|||++ |||||||||+||||+.+ +.+||+|||+|
T Consensus        85 ~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-~iiHrDlKp~NILl~~~-~~~Kl~DFG~a  162 (287)
T d1opja_          85 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGEN-HLVKVADFGLS  162 (287)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGG-GCEEECCCCCT
T ss_pred             CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-CcccCccccCeEEECCC-CcEEEccccce
Confidence            78899999999 67888888776556799999999999999999999999 99999999999999655 89999999999


Q ss_pred             hHhhhCCCC-CCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGHKL-PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~~~-~~~~~gt~~~~aPE~l~~~  254 (284)
                      +........ .....||++|+|||++.+.
T Consensus       163 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  191 (287)
T d1opja_         163 RLMTGDTYTAHAGAKFPIKWTAPESLAYN  191 (287)
T ss_dssp             TTCCSSSSEEETTEEECGGGCCHHHHHHC
T ss_pred             eecCCCCceeeccccccccccChHHHcCC
Confidence            876544322 2345689999999998764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.1e-34  Score=248.88  Aligned_cols=161  Identities=24%  Similarity=0.414  Sum_probs=134.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..       ...+.+.+|+.+++.++|        |||+++++++. 
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~~~~~~~-   74 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH--------PFIIRMWGTFQ-   74 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB--------TTBCCEEEEEE-
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccC--------cChhheeeeEe-
Confidence            36999999999999999999863     3555532       234567899999999998        77999999887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +|++...+....  .+++..++.++.||+.||.|||++ |||||||||+||||+. ++.++|+|
T Consensus        75 ---~~~~~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NILl~~-~g~vkL~D  147 (316)
T d1fota_          75 ---DAQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDK-NGHIKITD  147 (316)
T ss_dssp             ---CSSEEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECT-TSCEEECC
T ss_pred             ---eCCeeeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccC-cEEccccCchheeEcC-CCCEEEec
Confidence               888999999999 556666665543  489999999999999999999999 9999999999999955 48999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+|.....   ...+.+||+.|+|||++.+.-
T Consensus       148 FG~a~~~~~---~~~~~~Gt~~Y~APE~l~~~~  177 (316)
T d1fota_         148 FGFAKYVPD---VTYTLCGTPDYIAPEVVSTKP  177 (316)
T ss_dssp             CSSCEECSS---CBCCCCSCTTTCCHHHHTTCC
T ss_pred             CccceEecc---ccccccCcccccCHHHHcCCC
Confidence            999876543   334678999999999997753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.3e-34  Score=253.94  Aligned_cols=164  Identities=23%  Similarity=0.339  Sum_probs=137.1

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++|++++.||+|+||+||+|.++     +++|+....    ...+.+|+.+|+.++|        +||++++++|.    
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H--------pnIv~~~~~~~----   96 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH--------PKLINLHDAFE----   96 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS--------TTBCCEEEEEE----
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCC--------CCCCcEEEEEE----
Confidence            46999999999999999999863     356654322    2456789999999988        77999999887    


Q ss_pred             CCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEee-CCCcEEEEecc
Q psy16752        147 NGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCV-DEARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~-~~~~v~l~Dfg  224 (284)
                      ....+||||||+ +|+|.+.+.... .++++..++.++.||+.||.|||++ |||||||||+||||+. +.+.++|+|||
T Consensus        97 ~~~~~~ivmE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHRDiKp~NILl~~~~~~~vkL~DFG  174 (352)
T d1koba_          97 DKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFG  174 (352)
T ss_dssp             CSSEEEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred             ECCEEEEEEEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccccccccccccCCCeEEEeecc
Confidence            788999999999 678877765543 3599999999999999999999999 9999999999999964 45799999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|...... ....+.+||+.|+|||++.+.
T Consensus       175 la~~~~~~-~~~~~~~gt~~y~aPE~~~~~  203 (352)
T d1koba_         175 LATKLNPD-EIVKVTTATAEFAAPEIVDRE  203 (352)
T ss_dssp             TCEECCTT-SCEEEECSSGGGCCHHHHTTC
T ss_pred             cceecCCC-CceeeccCcccccCHHHHcCC
Confidence            99876554 334467899999999999765

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-34  Score=245.51  Aligned_cols=167  Identities=28%  Similarity=0.407  Sum_probs=144.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..      ...+.+.+|+.+++.++|        +||++++++|.  
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H--------p~Iv~~~~~~~--   71 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH--------PNIVKLLDVIH--   71 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCC--------TTBCCEEEEEE--
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC--------CcEEEeccccc--
Confidence            36999999999999999999873     3555532      235678899999999988        77999999887  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        ....+|+||||+++++...+.......+++..+..++.||+.||.|||++ |||||||||+|||++. ++.++++|||
T Consensus        72 --~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~-~IiHrDiKpeNIl~~~-~~~~kl~DFG  147 (298)
T d1gz8a_          72 --TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINT-EGAIKLADFG  147 (298)
T ss_dssp             --ETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT-TSCEEECSTT
T ss_pred             --cccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC-CEEccccCchheeecc-cCcceeccCC
Confidence              77899999999999988888776666799999999999999999999999 9999999999999954 4799999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      .|..............||+.|+|||++...-.
T Consensus       148 ~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~  179 (298)
T d1gz8a_         148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKY  179 (298)
T ss_dssp             HHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSS
T ss_pred             cceeccCCcccceeecccceeeehhhhccccC
Confidence            99988776666777889999999999876543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-34  Score=245.22  Aligned_cols=164  Identities=24%  Similarity=0.396  Sum_probs=137.7

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCC----------CChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .++|++.+.||+|+||+||+|.++     +++|+...          ..+.+.+|+.+|+.++|        +||+++++
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~~~~   80 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH--------PNVITLHE   80 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC--------TTBCCEEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCC--------CCCCcEEE
Confidence            457999999999999999999863     35554321          13457899999999998        77999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC--
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA--  216 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~--  216 (284)
                      +|.    ....+||||||+ +|+|.+.+....  .+++..++.++.||+.||.|||++ +||||||||+|||++.++.  
T Consensus        81 ~~~----~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~-~ivHrDiKp~Nill~~~~~~~  153 (293)
T d1jksa_          81 VYE----NKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPK  153 (293)
T ss_dssp             EEE----CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSSSS
T ss_pred             EEE----ECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhc-ceeecccccceEEEecCCCcc
Confidence            887    888999999999 678888887654  599999999999999999999999 9999999999999966532  


Q ss_pred             -cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        217 -RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       217 -~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                       .++++|||+|.....+ ....+..||+.|+|||++.+.
T Consensus       154 ~~vkl~DfG~a~~~~~~-~~~~~~~~t~~y~APE~~~~~  191 (293)
T d1jksa_         154 PRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVNYE  191 (293)
T ss_dssp             CCEEECCCTTCEECTTS-CBCSCCCCCGGGCCHHHHTTC
T ss_pred             cceEecchhhhhhcCCC-ccccccCCCCcccCHHHHcCC
Confidence             6999999998876544 334467899999999999765

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-34  Score=250.21  Aligned_cols=168  Identities=22%  Similarity=0.259  Sum_probs=139.2

Q ss_pred             cceEEEE-EecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhh-hcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTR-KLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~-~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++|.++. .||+|+||+||+|.++     +++|+.. ....+.+|+.++.++ .|        +||++++++|.......
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~-~~~~~~~E~~~~~~~~~h--------pnIv~l~~~~~~~~~~~   81 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-DCPKARREVELHWRASQC--------PHIVRIVDVYENLYAGR   81 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE-CSHHHHHHHHHHHHHTTS--------TTBCCEEEEEEEEETTE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEEC-CcHHHHHHHHHHHHhcCC--------CCCCeEEEEEeecccCC
Confidence            4699886 5999999999999862     3666553 356788999987665 55        77999999887555567


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcEEEEeccc
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARVKTLALNA  225 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v~l~Dfg~  225 (284)
                      .++||||||+ +|+|.+++......++++.+++.++.||+.||.|||++ ||+||||||+|||++.+  .+.++|+|||+
T Consensus        82 ~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             CEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCccccccccccccccccccccccccccce
Confidence            8899999999 67999998776555699999999999999999999999 99999999999999653  45799999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |...... ....+.+||+.|+|||++.+.
T Consensus       161 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  188 (335)
T d2ozaa1         161 AKETTSH-NSLTTPCYTPYYVAPEVLGPE  188 (335)
T ss_dssp             CEECCCC-CCCCCCSCCCSSCCCCCCCGG
T ss_pred             eeeccCC-CccccccCCcccCCcHHHcCC
Confidence            9866554 334567899999999998764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.6e-34  Score=250.15  Aligned_cols=161  Identities=21%  Similarity=0.326  Sum_probs=136.7

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++++.||+|+||+||+|.++     +++|+..       ...+.+.+|+.+|+.++|        +||+++++++. 
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~~~~~~~-  111 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF--------PFLVKLEFSFK-  111 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC--------TTBCCEEEEEE-
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCC--------CcEeecccccc-
Confidence            47999999999999999999873     3555432       233557899999999988        77999999887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+++||||+ +|++...+.+..  .+++..++.++.||+.||.|||++ |||||||||+||||+.+ +.++|+|
T Consensus       112 ---~~~~~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~-~iiHRDIKP~NILl~~~-g~ikL~D  184 (350)
T d1rdqe_         112 ---DNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQ-GYIQVTD  184 (350)
T ss_dssp             ---CSSEEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTT-SCEEECC
T ss_pred             ---cccccccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC-CEecCcCCHHHcccCCC-CCEEeee
Confidence               788999999999 778888887664  599999999999999999999999 99999999999999554 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ||+|.....   ...+.+||+.|+|||++.+.-
T Consensus       185 FG~a~~~~~---~~~~~~Gt~~Y~APE~~~~~~  214 (350)
T d1rdqe_         185 FGFAKRVKG---RTWTLCGTPEALAPEIILSKG  214 (350)
T ss_dssp             CTTCEECSS---CBCCCEECGGGCCHHHHTTCC
T ss_pred             ceeeeeccc---ccccccCccccCCHHHHcCCC
Confidence            999986543   234678999999999998753

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-34  Score=246.19  Aligned_cols=163  Identities=20%  Similarity=0.261  Sum_probs=128.4

Q ss_pred             cceEEEEEecccCceeEEEecce--eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      ++|++.+.||+|+||+||+|..+  +++|+...      ..+.+.+|+.++++++|        +||++++++.     .
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~H--------pnIv~~~~~~-----~   74 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH--------VNILLFMGYS-----T   74 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCC--------TTBCCEEEEE-----C
T ss_pred             ccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC--------CCEeeeeEEE-----e
Confidence            56999999999999999999874  45555322      12567789999999988        6799988754     3


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccch
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNAT  226 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a  226 (284)
                      ...+++||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++ +||||||||+||||+.+ +.+||+|||+|
T Consensus        75 ~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~-~ivHrDlKp~NiLl~~~-~~~Kl~DFGla  151 (276)
T d1uwha_          75 APQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHED-LTVKIGDFGLA  151 (276)
T ss_dssp             SSSCEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETT-SSEEECCCCCS
T ss_pred             ccEEEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcC-CEeccccCHHHEEEcCC-CCEEEccccce
Confidence            45689999999 578888776543 3599999999999999999999999 99999999999999554 89999999998


Q ss_pred             hHhhhCC--CCCCcccCCCCccchhhhhhc
Q psy16752        227 ELAATGH--KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       227 ~~~~~~~--~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      .......  ....+.+||+.|+|||++.+.
T Consensus       152 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  181 (276)
T d1uwha_         152 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ  181 (276)
T ss_dssp             CC------------CCCCGGGCCHHHHTTC
T ss_pred             eeccccCCcccccccccCcccCCHHHHhcc
Confidence            7655332  233467899999999999643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-33  Score=245.67  Aligned_cols=165  Identities=18%  Similarity=0.239  Sum_probs=133.9

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEec-----CCCChhhHHHHHHHHhh-hcCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVS-----PQFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~-----~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++.+.||+|+||+||+|+++          ++++..     ......+.+|+.++.++ +|        +||+++++
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~H--------pnIv~l~~  108 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH--------ENIVNLLG  108 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC--------TTBCCEEE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCC--------CcEeEEEE
Confidence            57999999999999999999762          234432     22345678999999998 66        77999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCC---------------------CCCCHHHHHHHHHHHHHHHHHHhhCC
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKY---------------------RGIPLENVRSIIRQILQGLNYLHTKC  197 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~---------------------~~~~~~~~~~i~~qi~~aL~~LH~~~  197 (284)
                      ++.    ....+|+||||+ +|+|.+++.....                     ..+++..++.++.||+.||.|||++ 
T Consensus       109 ~~~----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-  183 (325)
T d1rjba_         109 ACT----LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-  183 (325)
T ss_dssp             EEC----SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             EEe----eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            887    778899999999 7888888865431                     2488999999999999999999999 


Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhc
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~  254 (284)
                      +||||||||+|||++.+ +.++|+|||+|+........  ..+.+||+.|+|||++.+.
T Consensus       184 ~IiHRDlKp~Nill~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~  241 (325)
T d1rjba_         184 SCVHRDLAARNVLVTHG-KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG  241 (325)
T ss_dssp             TEEETTCSGGGEEEETT-TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred             CeeeccCchhccccccC-CeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCC
Confidence            99999999999999554 89999999999876654432  3356789999999998654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-33  Score=240.10  Aligned_cols=167  Identities=23%  Similarity=0.309  Sum_probs=136.1

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEecCC----------CChhhHHHHHHHHhhhcCCCCCcccchhcccc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ----------FPETALDEIKLLKCVRDGDVNDPYRERVVQLL  138 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~  138 (284)
                      +.++|++.+.||+|+||+||+|.++     +++|+...          ....+.+|+.+++.+.+.      |+||++++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~------h~nIv~~~   75 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG------FSGVIRLL   75 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSS------SCSBCCEE
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccC------CCCccEEE
Confidence            3468999999999999999999873     35554321          224467899999999853      27899999


Q ss_pred             ccceEeccCCeEEEEEeccC-C-ccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCC
Q psy16752        139 DDFKICGVNGTHVCMVFEVL-G-HNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEA  216 (284)
Q Consensus       139 ~~~~~~~~~~~~~~iv~e~~-~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~  216 (284)
                      +++.    ....+|+||||+ + +.+.+.+....  .+++..++.++.||+.||.|||++ |||||||||+|||++.+.+
T Consensus        76 ~~~~----~~~~~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NIll~~~~~  148 (273)
T d1xwsa_          76 DWFE----RPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRG  148 (273)
T ss_dssp             EEEE----CSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTT
T ss_pred             EEEe----eCCeEEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC-CCccccCcccceEEecCCC
Confidence            9887    788999999999 4 35566665543  599999999999999999999999 9999999999999977778


Q ss_pred             cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        217 RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       217 ~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      .++|+|||+|.....  ....+.+||+.|+|||++.+.-
T Consensus       149 ~vkl~DFG~a~~~~~--~~~~~~~GT~~y~aPE~~~~~~  185 (273)
T d1xwsa_         149 ELKLIDFGSGALLKD--TVYTDFDGTRVYSPPEWIRYHR  185 (273)
T ss_dssp             EEEECCCTTCEECCS--SCBCCCCSCGGGSCHHHHHHSC
T ss_pred             eEEECccccceeccc--ccccccccCCCcCCHHHHcCCC
Confidence            999999999875433  2344678999999999997653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.3e-33  Score=238.10  Aligned_cols=163  Identities=25%  Similarity=0.366  Sum_probs=137.9

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC-------------ChhhHHHHHHHHhhh-cCCCCCcccchhc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------------PETALDEIKLLKCVR-DGDVNDPYRERVV  135 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------------~~~~~~E~~~l~~l~-~~~~~~~~~~~i~  135 (284)
                      .++|++.+.||+|+||+||+|+++     +++|+....             .+.+.+|+.+++.+. |        +||+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--------pnIv   73 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH--------PNII   73 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC--------TTBC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCC--------CCeE
Confidence            457999999999999999999862     355553221             135788999999997 6        7799


Q ss_pred             cccccceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC
Q psy16752        136 QLLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD  214 (284)
Q Consensus       136 ~l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~  214 (284)
                      ++++++.    +...+||||||+ +|+|.+++....  .+++..++.++.||+.||.|||++ |||||||||+|||++ +
T Consensus        74 ~~~~~~~----~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~-~  145 (277)
T d1phka_          74 QLKDTYE----TNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLD-D  145 (277)
T ss_dssp             CEEEEEE----CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC-T
T ss_pred             EEEeecc----cCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHc-CCcccccccceEEEc-C
Confidence            9999887    889999999999 679988887654  599999999999999999999999 999999999999995 4


Q ss_pred             CCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        215 EARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       215 ~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++.++|+|||++....... .....+||+.|+|||.+.+.
T Consensus       146 ~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~~PE~~~~~  184 (277)
T d1phka_         146 DMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEIIECS  184 (277)
T ss_dssp             TCCEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHH
T ss_pred             CCCeEEccchheeEccCCC-ceeeeeccCCCCCHHHhhcc
Confidence            5899999999998766543 34467899999999999754

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-33  Score=244.82  Aligned_cols=165  Identities=19%  Similarity=0.316  Sum_probs=137.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCCC---hhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFP---ETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVN  147 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~---~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~  147 (284)
                      ++|++.+.||+|+||+||+|.++     +++|+.....   ..+.+|+.+|+.++|        +||++++++|.    .
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~H--------pnIv~~~~~~~----~   72 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH--------RNILHLHESFE----S   72 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC--------TTBCCEEEEEE----E
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCC--------CCCCeEEEEEE----E
Confidence            57999999999999999999873     3666544332   346799999999998        77999999887    7


Q ss_pred             CeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC-CCcEEEEeccc
Q psy16752        148 GTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD-EARVKTLALNA  225 (284)
Q Consensus       148 ~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~-~~~v~l~Dfg~  225 (284)
                      ...+|+||||+ +++|.+.+.... ..+++..++.++.||+.||.|||++ ||+||||||+|||++.+ ...++|+|||+
T Consensus        73 ~~~~~lvmE~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~-~iiHrDlKp~NIll~~~~~~~ikl~DFG~  150 (321)
T d1tkia_          73 MEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQ  150 (321)
T ss_dssp             TTEEEEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTT
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccccccceeecCCCceEEEEcccch
Confidence            78999999999 678888886543 3599999999999999999999999 99999999999999654 45899999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +...... ....+.+||++|+|||++.+.-
T Consensus       151 ~~~~~~~-~~~~~~~~t~~y~ape~~~~~~  179 (321)
T d1tkia_         151 ARQLKPG-DNFRLLFTAPEYYAPEVHQHDV  179 (321)
T ss_dssp             CEECCTT-CEEEEEESCGGGSCHHHHTTCE
T ss_pred             hhccccC-CcccccccccccccchhccCCC
Confidence            8765443 3344678999999999986553

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.3e-33  Score=238.22  Aligned_cols=170  Identities=20%  Similarity=0.258  Sum_probs=130.6

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEecCCC-------ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      .+.++|++.+.||+|+||+||+|.++     +++|+....       ...+.+|+.+++.++|        +||+++++.
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~h--------pniv~~~~~   75 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH--------PAIVAVYDT   75 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCC--------TTBCCEEEE
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCC--------CCCCcccce
Confidence            45678999999999999999999862     366654321       2346789999999988        679999998


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.........+|+||||+ +++|.+.+....  .+++..++.++.||+.||.|||++ |||||||||+|||++. .+.++
T Consensus        76 ~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~-~iiHrDiKP~NIll~~-~~~~~  151 (277)
T d1o6ya_          76 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVK  151 (277)
T ss_dssp             EEEECSSSEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEET-TSCEE
T ss_pred             eeeccCCCceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhC-CccCccccCcccccCc-cccce
Confidence            876555667899999999 567777666554  599999999999999999999999 9999999999999955 48999


Q ss_pred             EEeccchhHhhhCC---CCCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGH---KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~---~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|||.+.......   ....+.+||+.|+|||++.+.
T Consensus       152 l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~  189 (277)
T d1o6ya_         152 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD  189 (277)
T ss_dssp             ECCCTTCEECC----------------TTCCHHHHTTC
T ss_pred             eehhhhhhhhccccccccccccccCcccccCHHHHcCC
Confidence            99999876443322   234467899999999999765

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-33  Score=241.22  Aligned_cols=164  Identities=17%  Similarity=0.297  Sum_probs=133.7

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++|++.+.||+|+||+||+|.++    +++|+...   ..+.+.+|+.++++++|        +||+++++++.     .
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~H--------pnIv~~~g~~~-----~   79 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH--------QRLVRLYAVVT-----Q   79 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC-----S
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCC--------CCEeEEEeeec-----c
Confidence            47999999999999999999863    34554332   24568899999999998        77999998653     3


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +|+|.+.+.......+++..+..++.||+.||.|||++ +|+||||||+||||+. ++.++|+|||+|+
T Consensus        80 ~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~-~ivHrDiKp~NIll~~-~~~~Kl~DFGla~  157 (272)
T d1qpca_          80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSD-TLSCKIADFGLAR  157 (272)
T ss_dssp             SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT-TSCEEECCCTTCE
T ss_pred             CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccchhheeeec-ccceeeccccceE
Confidence            4578999999 67777766554434599999999999999999999999 9999999999999954 4899999999998


Q ss_pred             HhhhCCC-CCCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHK-LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~-~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ....... ......||+.|+|||++.+.
T Consensus       158 ~~~~~~~~~~~~~~gt~~y~APE~~~~~  185 (272)
T d1qpca_         158 LIEDNEYTAREGAKFPIKWTAPEAINYG  185 (272)
T ss_dssp             ECSSSCEECCTTCCCCTTTSCHHHHHHC
T ss_pred             EccCCccccccccCCcccccChHHHhCC
Confidence            7654432 23356799999999999754

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.5e-33  Score=246.19  Aligned_cols=164  Identities=21%  Similarity=0.277  Sum_probs=130.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      ++|++.+.||+|+||+||+|.++     +++|+..       .....+.+|...++.+.+.+     ||||++++++|. 
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~-----hpnIv~l~~~~~-   77 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-----CPFIVCMSYAFH-   77 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSC-----CTTBCCEEEEEE-
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCC-----CCcEEEEEEEEE-
Confidence            36999999999999999999873     3555432       12233455554444444321     377999999887 


Q ss_pred             eccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEe
Q psy16752        144 CGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLA  222 (284)
Q Consensus       144 ~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~D  222 (284)
                         ....+|+||||+ +|+|.+.+....  .+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++|+|
T Consensus        78 ---~~~~~~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~-~iiHrDlKP~NILl~~~-g~iKl~D  150 (364)
T d1omwa3          78 ---TPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEH-GHVRISD  150 (364)
T ss_dssp             ---CSSEEEEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-SCEEECC
T ss_pred             ---ECCEEEEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHC-CccceeeccceeEEcCC-CcEEEee
Confidence               788999999999 688888887654  589999999999999999999999 99999999999999544 8999999


Q ss_pred             ccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        223 LNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       223 fg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||+|......  .....+||+.|+|||++.+.
T Consensus       151 FGla~~~~~~--~~~~~~GT~~y~APE~~~~~  180 (364)
T d1omwa3         151 LGLACDFSKK--KPHASVGTHGYMAPEVLQKG  180 (364)
T ss_dssp             CTTCEECSSS--CCCSCCSCGGGCCHHHHSTT
T ss_pred             eceeeecCCC--cccccccccccchhHHhhcC
Confidence            9998765443  34467899999999999653

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-33  Score=245.04  Aligned_cols=170  Identities=20%  Similarity=0.280  Sum_probs=140.2

Q ss_pred             ceEEEEEecccCceeEEEecce-----eEEEecCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec--cCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG--VNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~--~~~~  149 (284)
                      +|+.+++||+|+||+||+|.++     +++|+.........+|+.+|++++|        +||++++++|...+  ....
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h--------~niv~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDH--------CNIVRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCC--------TTBCCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCC--------CCCCcEEEEEEecCccCCce
Confidence            6999999999999999999873     4677666666667789999999988        67999998875433  2456


Q ss_pred             EEEEEeccCCccHHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        150 HVCMVFEVLGHNLLKLIVK--SKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       150 ~~~iv~e~~~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ++|+||||+++++...+..  .....+++..++.++.||+.||.|||++ |||||||||+|||++.++..++|+|||++.
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-~IiHrDiKp~NILl~~~~~~~kl~DFG~a~  171 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAK  171 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCcceEEEecCCCceeEecccchh
Confidence            7899999998887766653  2334699999999999999999999999 999999999999997776799999999987


Q ss_pred             HhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        228 LAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       228 ~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      ..... ....+.+||+.|+|||++.+...
T Consensus       172 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~  199 (350)
T d1q5ka_         172 QLVRG-EPNVSYICSRYYRAPELIFGATD  199 (350)
T ss_dssp             ECCTT-SCCCSCCSCTTSCCHHHHTTCSS
T ss_pred             hccCC-cccccccccccccChHHhhcccC
Confidence            66544 34456789999999999876543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-33  Score=236.22  Aligned_cols=164  Identities=16%  Similarity=0.229  Sum_probs=126.0

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      .+|++.+.||+|+||+||+|.++    +++|....   ..+.+.+|+.+++.++|        +||+++++++.    ..
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~H--------pnIv~~~g~~~----~~   72 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH--------PKLVQLYGVCL----EQ   72 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC----SS
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCC--------CCcccccceec----cC
Confidence            46999999999999999999762    45555332   34668899999999998        77999999876    67


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+|+||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++
T Consensus        73 ~~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~-~iiHrDlKp~Nill~~~-~~~Kl~DFGla~  149 (263)
T d1sm2a_          73 APICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGEN-QVIKVSDFGMTR  149 (263)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCTTCSGGGEEECGG-GCEEECSCC---
T ss_pred             CceEEEEEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhcc-ceeecccchhheeecCC-CCeEecccchhe
Confidence            7899999999 677777766543 4589999999999999999999999 99999999999999654 899999999998


Q ss_pred             HhhhCCCC-CCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKL-PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~-~~~~~gt~~~~aPE~l~~~  254 (284)
                      ........ .....||+.|+|||++.+.
T Consensus       150 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~  177 (263)
T d1sm2a_         150 FVLDDQYTSSTGTKFPVKWASPEVFSFS  177 (263)
T ss_dssp             ---------------CTTSCCHHHHTTC
T ss_pred             eccCCCceeecceecCcccCChHHhcCC
Confidence            76544322 3356799999999999764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-33  Score=240.91  Aligned_cols=164  Identities=21%  Similarity=0.333  Sum_probs=136.6

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecC-------CCChhhHHHHHHHH-hhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSP-------QFPETALDEIKLLK-CVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~-------~~~~~~~~E~~~l~-~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|.+.+.||+|+||+||+|.++     +++|+..       ...+.+..|..++. .++|        |||+++++++.
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~h--------p~Iv~~~~~~~   73 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--------PFLTHMFCTFQ   73 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC--------TTBCCEEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCC--------CcEEEEEEEEc
Confidence            36999999999999999999873     3555532       22345667777665 5677        77999999888


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+||||||+ +|+|.+++....  .+++..++.++.||+.||.|||++ +||||||||+|||++ +.+.++++
T Consensus        74 ----~~~~~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~-~iiHrDikp~NiL~~-~~~~~kl~  145 (320)
T d1xjda_          74 ----TKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLD-KDGHIKIA  145 (320)
T ss_dssp             ----CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEEC-TTSCEEEC
T ss_pred             ----cCCceeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCcccceeec-CCCceecc
Confidence                888999999999 678888876654  599999999999999999999999 999999999999995 45899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||++.............+||+.|+|||++.+.-
T Consensus       146 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  179 (320)
T d1xjda_         146 DFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQK  179 (320)
T ss_dssp             CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             ccchhhhcccccccccccCCCCCcCCHHHHcCCC
Confidence            9999987666555566778999999999997643

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-33  Score=242.06  Aligned_cols=164  Identities=15%  Similarity=0.209  Sum_probs=121.9

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++.+.||+|+||+||+|.++        .+++.....     .+.+.+|+.+|++++|        +||+++++++.
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H--------pnIv~l~g~~~   97 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH--------PNVIHLEGVVT   97 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC--------TTBCCEEEEEC
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC--------CCCccEEEEEe
Confidence            46999999999999999999863        233332221     2457899999999988        77999999876


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                          ....+|+||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++ +||||||||+||||+. ++.++|+
T Consensus        98 ----~~~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~-~iiHrDlKp~NILl~~-~~~~Kl~  170 (299)
T d1jpaa_          98 ----KSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNS-NLVCKVS  170 (299)
T ss_dssp             ----SSSSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT-TCCEEEC
T ss_pred             ----eCCEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhC-CCccCccccceEEECC-CCcEEEC
Confidence                677899999999 566666665543 4599999999999999999999999 9999999999999954 4899999


Q ss_pred             eccchhHhhhCCCCC-----CcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHKLP-----VSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~-----~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|+.........     ....||+.|+|||++.+.
T Consensus       171 DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  208 (299)
T d1jpaa_         171 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR  208 (299)
T ss_dssp             CC-----------------------CGGGSCHHHHHSC
T ss_pred             CcccceEccCCCCcceeeecccccCCccccCHHHHhcC
Confidence            999998765433221     134578999999998754

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.98  E-value=3.1e-32  Score=234.72  Aligned_cols=169  Identities=18%  Similarity=0.263  Sum_probs=137.7

Q ss_pred             eeccceEEEEEecccCceeEEEecce-----eEEEec--CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         73 LFNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS--PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        73 ~~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      +++++|++.+.||+|+||+||+|.+.     +++|+.  ......+.+|++.++.+.|.       ++++.++..+.   
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~-------~~i~~~~~~~~---   71 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC-------TGIPNVYYFGQ---   71 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTC-------TTCCCEEEEEE---
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCC-------CCCCEEEEEee---
Confidence            56789999999999999999999863     356653  33456678999999999872       55666776555   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC----CCcEEEE
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD----EARVKTL  221 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~----~~~v~l~  221 (284)
                       .....|+||||++++|.+.+.... ..++...+..++.|++.||.|||++ |||||||||+|||++.+    .+.++|+
T Consensus        72 -~~~~~~~vme~~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~-giiHrDiKp~Nili~~~~~~~~~~vkl~  148 (293)
T d1csna_          72 -EGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVV  148 (293)
T ss_dssp             -ETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred             -cCCccEEEEEecCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeecCcccccCCceEEc
Confidence             778899999999999988876544 4599999999999999999999999 99999999999999642    4689999


Q ss_pred             eccchhHhhhCC-------CCCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGH-------KLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~-------~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|.......       ....+.+||+.|+|||++.++
T Consensus       149 DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~  188 (293)
T d1csna_         149 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR  188 (293)
T ss_dssp             CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC
T ss_pred             ccceeEEcccCccccceeecccCceEEchhhcCHHHhcCC
Confidence            999998654321       123466899999999998765

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6.9e-33  Score=239.40  Aligned_cols=160  Identities=26%  Similarity=0.362  Sum_probs=134.3

Q ss_pred             EEEEecccCceeEEEecce-----eEEEecCC---------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         80 VTRKLGWGHFSTVWFTGSK-----TQVLVSPQ---------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        80 i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+++||+|+||+||+|.++     +++|+...         ..+.+.+|+.+++.++|        +||+++++++.   
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~h--------pnIv~~~~~~~---   70 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH--------PNIIGLLDAFG---   70 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC--------TTBCCEEEEEC---
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCC--------CCEeEEEeeec---
Confidence            4689999999999999873     35555321         23467899999999998        77999999887   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       ...++|+||||+.++++..+.... ..+++..+..++.||+.||.|||++ ||+||||||+|||++ ..+.++|+|||+
T Consensus        71 -~~~~~~ivmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDiKp~NIli~-~~~~~KL~DFG~  146 (299)
T d1ua2a_          71 -HKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLD-ENGVLKLADFGL  146 (299)
T ss_dssp             -CTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEC-TTCCEEECCCGG
T ss_pred             -cCCceeehhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhcc-ceecccCCcceEEec-CCCccccccCcc
Confidence             778899999999888777776543 4599999999999999999999999 999999999999995 458999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |...........+.+||+.|+|||++.+.
T Consensus       147 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (299)
T d1ua2a_         147 AKSFGSPNRAYTHQVVTRWYRAPELLFGA  175 (299)
T ss_dssp             GSTTTSCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred             ccccCCCcccccceecChhhccHHHHccC
Confidence            98777666666678899999999998654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.5e-32  Score=235.54  Aligned_cols=164  Identities=14%  Similarity=0.164  Sum_probs=124.5

Q ss_pred             cceEEEEEecccCceeEEEecce---------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      ..|++.++||+|+||+||+|.++         +++|.....     ...+.+|+.+++.++|        +||+++++++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H--------~nIv~~~g~~   78 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH--------HNIIRLEGVI   78 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC--------TTBCCEEEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCC--------CCEeeeeEEE
Confidence            35999999999999999999753         244443221     2357789999999988        7799999977


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    ....+++||||+ ++++.+.+... ...+++..+..++.||+.||.|||++ +|+||||||+||||+.+ +.+||
T Consensus        79 ~----~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~-~iiHrDlKp~NILl~~~-~~~Kl  151 (283)
T d1mqba_          79 S----KYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSN-LVCKV  151 (283)
T ss_dssp             C----SSSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT-CCEEE
T ss_pred             e----cCCceEEEEEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhcccc-ccccCccccceEEECCC-CeEEE
Confidence            6    777899999999 55555555443 34699999999999999999999999 99999999999999554 89999


Q ss_pred             EeccchhHhhhCCCC---CCcccCCCCccchhhhhhc
Q psy16752        221 LALNATELAATGHKL---PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~---~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|||+|+........   .....||+.|+|||++.+.
T Consensus       152 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~  188 (283)
T d1mqba_         152 SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR  188 (283)
T ss_dssp             CCCCC-----------------CCCGGGSCHHHHHSC
T ss_pred             cccchhhcccCCCccceEeccCCCCccccCHHHHccC
Confidence            999999876544322   2245689999999998654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.98  E-value=2.4e-32  Score=234.52  Aligned_cols=166  Identities=23%  Similarity=0.368  Sum_probs=136.3

Q ss_pred             cceEEEEEecccCceeEEEecce----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      ++|+++++||+|+||+||+|.++    +++|+...      ..+.+.+|+.+|+.++|        +||+++++++.   
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h--------pnIv~~~~~~~---   70 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH--------SNIVKLYDVIH---   70 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC--------TTBCCEEEEEE---
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC--------CcEEeeeeecc---
Confidence            47999999999999999999873    46665322      24578899999999988        67999999887   


Q ss_pred             cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccc
Q psy16752        146 VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNA  225 (284)
Q Consensus       146 ~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~  225 (284)
                       .....|++|+++.++++..+.... +.+++..+..++.||+.||.|||+. +||||||||+|||++.+ +.++++|||.
T Consensus        71 -~~~~~~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~-~IvHrDiKp~NIll~~~-~~~kl~DfG~  146 (286)
T d1ob3a_          71 -TKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINRE-GELKIADFGL  146 (286)
T ss_dssp             -CSSCEEEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT-SCEEECCTTH
T ss_pred             -cCCceeEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccC-cEEecCCCCceeeEcCC-CCEEeccccc
Confidence             788899999999888888887654 4699999999999999999999999 99999999999999554 8999999999


Q ss_pred             hhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        226 TELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       226 a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      |..............|++.|+|||++.+...
T Consensus       147 a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~  177 (286)
T d1ob3a_         147 ARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK  177 (286)
T ss_dssp             HHHHCC---------CCCTTCCHHHHTTCCS
T ss_pred             ceecccCccccceecccchhhhHHHHhCCCC
Confidence            9887766555567789999999999976543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-32  Score=235.36  Aligned_cols=165  Identities=20%  Similarity=0.279  Sum_probs=128.6

Q ss_pred             cceEEEEEecccCceeEEEecc----eeEEEecCC---CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS----KTQVLVSPQ---FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++|++.+.||+|+||+||+|.+    .+++|+...   ..+.+.+|+.++++++|        +||+++++++.     .
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h--------~nIv~~~g~~~-----~   83 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--------EKLVQLYAVVS-----E   83 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCC--------TTBCCEEEEEC-----S
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhccc--------CCEeEEEEEEe-----c
Confidence            5799999999999999999986    345555432   23668899999999998        67999998763     3


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ..+++||||+ +|++...+.......+++..++.++.||+.||.|||+. ||+||||||+||||+.+ +.++|+|||+|+
T Consensus        84 ~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~ivH~DlKp~NIll~~~-~~~kl~DfGla~  161 (285)
T d1fmka3          84 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGEN-LVCKVADFGLAR  161 (285)
T ss_dssp             SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGG-GCEEECCCCTTC
T ss_pred             CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh-heecccccceEEEECCC-CcEEEcccchhh
Confidence            4578999999 66777777665445699999999999999999999999 99999999999999654 899999999998


Q ss_pred             HhhhCCC-CCCcccCCCCccchhhhhhcc
Q psy16752        228 LAATGHK-LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       228 ~~~~~~~-~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ....... ......||+.|+|||++...-
T Consensus       162 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  190 (285)
T d1fmka3         162 LIEDNEYTARQGAKFPIKWTAPEAALYGR  190 (285)
T ss_dssp             --------------CCGGGSCHHHHHHCC
T ss_pred             hccCCCceeeccccccccccChHHHhCCC
Confidence            7654432 233567999999999996543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.9e-32  Score=233.82  Aligned_cols=163  Identities=21%  Similarity=0.304  Sum_probs=130.1

Q ss_pred             cceEEEEE-ecccCceeEEEecce-------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRK-LGWGHFSTVWFTGSK-------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~-LG~G~fg~Vy~a~~~-------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|.+.+. ||+|+||+||+|.++       +++|+....     .+.+.+|+.+|++++|        +||+++++++.
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~l~g~~~   79 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN--------PYIVRLIGVCQ   79 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC--------TTBCCEEEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCC--------CCEeeEeeeec
Confidence            46888885 999999999999652       355553322     2457889999999998        77999998764


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                           ...+|+||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++ +||||||||+|||++.+ +.++|+
T Consensus        80 -----~~~~~lvmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~Nill~~~-~~~Kl~  151 (285)
T d1u59a_          80 -----AEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNR-HYAKIS  151 (285)
T ss_dssp             -----SSSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEET-TEEEEC
T ss_pred             -----cCeEEEEEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCcCchhheeeccC-Cceeec
Confidence                 34589999999 567777665433 4599999999999999999999999 99999999999999665 899999


Q ss_pred             eccchhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        222 ALNATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       222 Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||+|+.......   .....+||+.|+|||++.+.
T Consensus       152 DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  187 (285)
T d1u59a_         152 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR  187 (285)
T ss_dssp             CCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHC
T ss_pred             cchhhhcccccccccccccccccCccccChHHHhCC
Confidence            9999986654332   22355789999999998644

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9e-32  Score=232.86  Aligned_cols=173  Identities=21%  Similarity=0.397  Sum_probs=137.5

Q ss_pred             ccceEEEEEecccCceeEEEecce------eEEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccce
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK------TQVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      .++|++++.||+|+||+||+|.+.      +++|+.      ......+.+|+.+++.+...+     |+||++++++|.
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~-----HpnIv~~~~~~~   80 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE-----HPNVVRLFDVCT   80 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTC-----CTTBCCEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcC-----CCCcceeeeeec
Confidence            468999999999999999999762      244542      223446778999998885321     378999998875


Q ss_pred             Eec-cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        143 ICG-VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       143 ~~~-~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ... ....++|++|||+.++++..........+++..++.++.||+.||.|||++ +||||||||+|||++ +.+.++++
T Consensus        81 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ivHrDiKp~NILi~-~~~~~kl~  158 (305)
T d1blxa_          81 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVT-SSGQIKLA  158 (305)
T ss_dssp             EEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEC-TTCCEEEC
T ss_pred             ccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecCCCccEEEEc-CCCCeeec
Confidence            432 355789999999988887777666656799999999999999999999999 999999999999994 44899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||++...... ....+.+||+.|+|||++.+.-
T Consensus       159 dfg~~~~~~~~-~~~~~~~gT~~Y~APE~~~~~~  191 (305)
T d1blxa_         159 DFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSS  191 (305)
T ss_dssp             SCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCC
T ss_pred             chhhhhhhccc-ccCCCcccChhhcCcchhcCCC
Confidence            99998754433 2344678999999999997653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.9e-32  Score=231.12  Aligned_cols=165  Identities=19%  Similarity=0.201  Sum_probs=121.4

Q ss_pred             ccceEEEEEecccCceeEEEecce--------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .++|++.+.||+|+||+||+|.+.        .+++.....     .+.+.+|+.+++.++|        |||+++++++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~H--------pnIv~l~~~~   77 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH--------PHIVKLIGVI   77 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC--------TTBCCEEEEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEE
Confidence            357999999999999999999762        234433221     2447789999999988        7799999976


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .     ...+|+||||+ +|++.+++.... ..+++..++.++.||+.||.|||++ +||||||||+||+++.+ +.++|
T Consensus        78 ~-----~~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDlKp~NIll~~~-~~~Kl  149 (273)
T d1mp8a_          78 T-----ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSN-DCVKL  149 (273)
T ss_dssp             C-----SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEET-TEEEE
T ss_pred             e-----cCeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhccc-CeeccccchhheeecCC-CcEEE
Confidence            3     45689999999 566766655443 4599999999999999999999999 99999999999999665 89999


Q ss_pred             EeccchhHhhhCCC-CCCcccCCCCccchhhhhhcc
Q psy16752        221 LALNATELAATGHK-LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~-~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|||+|........ .....+||+.|+|||++.+.-
T Consensus       150 ~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~  185 (273)
T d1mp8a_         150 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR  185 (273)
T ss_dssp             CC-------------------CCGGGCCHHHHHHCC
T ss_pred             ccchhheeccCCcceeccceecCcccchhhHhccCC
Confidence            99999987654433 233557899999999997643

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-31  Score=232.55  Aligned_cols=164  Identities=21%  Similarity=0.261  Sum_probs=129.6

Q ss_pred             cceEEEEEecccCceeEEEecce---------eEEEecC-----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---------TQVLVSP-----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDF  141 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---------~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~  141 (284)
                      .+|++++.||+|+||+||+|.++         +++|...     ...+.+.+|+.+++.++|        +||+++++++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H--------pnIv~l~g~~   80 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN--------PHVCRLLGIC   80 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCC--------TTBCCEEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEE
Confidence            46999999999999999999762         2333321     224568899999999998        7799999987


Q ss_pred             eEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        142 KICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       142 ~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                      .    .. ..+++|+++ +++|++.+.... ..+++..++.++.||+.||.|||++ +||||||||+||||+.+ +.++|
T Consensus        81 ~----~~-~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~-~iiHrDlKp~NIll~~~-~~~kl  152 (317)
T d1xkka_          81 L----TS-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTP-QHVKI  152 (317)
T ss_dssp             E----SS-SEEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEET-TEEEE
T ss_pred             e----cC-CeeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHc-CcccCcchhhcceeCCC-CCeEe
Confidence            5    44 355666766 888888877654 4599999999999999999999999 99999999999999665 89999


Q ss_pred             EeccchhHhhhCCCCC--CcccCCCCccchhhhhhcc
Q psy16752        221 LALNATELAATGHKLP--VSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       221 ~Dfg~a~~~~~~~~~~--~~~~gt~~~~aPE~l~~~~  255 (284)
                      +|||+|..........  ....||+.|+|||++.+..
T Consensus       153 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  189 (317)
T d1xkka_         153 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI  189 (317)
T ss_dssp             CCCSHHHHTTTTCC--------CCTTTSCHHHHHHCC
T ss_pred             eccccceecccccccccccccccCccccChHHHhcCC
Confidence            9999998876544332  2456899999999987653

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.9e-32  Score=237.31  Aligned_cols=176  Identities=24%  Similarity=0.344  Sum_probs=134.4

Q ss_pred             Ccccccccce---eccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCc
Q psy16752         64 GYHPVKIGML---FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDP  129 (284)
Q Consensus        64 ~~~~~~~~~~---~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~  129 (284)
                      ++++..++..   +.++|++++.||+|+||+||+|.++     +++|+....      .+.+.+|+.+|+.++|      
T Consensus         3 ~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h------   76 (346)
T d1cm8a_           3 GFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH------   76 (346)
T ss_dssp             SBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCB------
T ss_pred             CcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCC------
Confidence            4555556554   5679999999999999999999863     366664322      2356789999999998      


Q ss_pred             ccchhccccccceEec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        130 YRERVVQLLDDFKICG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       130 ~~~~i~~l~~~~~~~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                        +||++++++|...+  ....++|+||||++.++...+...   ++++..++.++.||+.||.|||++ |||||||||+
T Consensus        77 --pniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~-~IiHrDiKp~  150 (346)
T d1cm8a_          77 --ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPG  150 (346)
T ss_dssp             --TTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGG
T ss_pred             --CCeeEEEEEeccCccccccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhC-CCcccccCcc
Confidence              67999998875322  133468999999987777766543   499999999999999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||++. ++.++++|||+|.....   .....+||+.|+|||++.+..
T Consensus       151 NIL~~~-~~~~kl~Dfg~a~~~~~---~~~~~~~t~~y~aPE~~~~~~  194 (346)
T d1cm8a_         151 NLAVNE-DCELKILDFGLARQADS---EMTGYVVTRWYRAPEVILNWM  194 (346)
T ss_dssp             GEEECT-TCCEEECCCTTCEECCS---SCCSSCSCGGGCCTHHHHTTT
T ss_pred             hhhccc-ccccccccccceeccCC---ccccccccccccCHHHHcCCC
Confidence            999954 48999999999875543   234668999999999997643

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=5.7e-32  Score=236.55  Aligned_cols=165  Identities=23%  Similarity=0.345  Sum_probs=133.4

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC-CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ-FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      ++|+++++||+|+||+||+|+++     +++|+... ..+.+.+|+.+|+.+.+       |+||+++++.|.  .....
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~-------hpnIv~~~~~~~--~~~~~  105 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG-------GPNIITLADIVK--DPVSR  105 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTT-------STTBCCEEEEEE--CTTTC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccC-------CCCCcEEEEEEE--ecCCC
Confidence            57999999999999999999873     36665433 44678899999999963       277999998775  23456


Q ss_pred             EEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        150 HVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       150 ~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      .+++||||+.++.+..+    .+.+++..++.++.||+.||.|||++ |||||||||+|||++.++..++++|||+|...
T Consensus       106 ~~~~v~e~~~~~~L~~~----~~~l~e~~i~~i~~qil~aL~~LH~~-gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         106 TPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             SEEEEEECCCSCBGGGT----TTSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             ceeEEEeecCCCcHHHH----hcCCCHHHHHHHHHHHHHHHHHHhhc-ccccccccccceEEcCCCCeeeecccccceec
Confidence            79999999955443222    23599999999999999999999999 99999999999999877778999999999866


Q ss_pred             hhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ... ......++|+.|+|||++.+.-
T Consensus       181 ~~~-~~~~~~~~t~~y~aPE~~~~~~  205 (328)
T d3bqca1         181 HPG-QEYNVRVASRYFKGPELLVDYQ  205 (328)
T ss_dssp             CTT-CCCCSCCSCGGGCCHHHHTTCC
T ss_pred             cCC-CcccccccCccccCcccccCCC
Confidence            554 3345678999999999987653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.8e-32  Score=233.14  Aligned_cols=167  Identities=19%  Similarity=0.222  Sum_probs=123.7

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|++.+.||+|+||+||+|.+.          +++|.....     .+.+..|..++.++.|       |++|+.+++.
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~-------h~~iv~~~~~   85 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-------HLNVVNLLGA   85 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCC-------CTTBCCEEEE
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcC-------CCeEEEeeee
Confidence            57999999999999999999752          344543321     2345677788888765       3678887765


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCC
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIK  205 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiK  205 (284)
                      +.   .....+++||||+ +|+|.+++....              ...+++..+..++.||+.||.|||++ +|||||||
T Consensus        86 ~~---~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~ivHrDlK  161 (299)
T d1ywna1          86 CT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLA  161 (299)
T ss_dssp             EC---STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCC
T ss_pred             ec---cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-CCcCCcCC
Confidence            43   2456789999999 788888876532              12488999999999999999999999 99999999


Q ss_pred             CCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        206 PENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       206 p~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |+||||+.+ +.+||+|||+|+.......  ...+.+||+.|+|||++.+.
T Consensus       162 p~NILl~~~-~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  211 (299)
T d1ywna1         162 ARNILLSEK-NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR  211 (299)
T ss_dssp             GGGEEECGG-GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHC
T ss_pred             ccceeECCC-CcEEEccCcchhhccccccccccCceeeCccccchhHhhcC
Confidence            999999554 8999999999986554332  33466899999999998764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.5e-32  Score=230.07  Aligned_cols=156  Identities=17%  Similarity=0.216  Sum_probs=122.7

Q ss_pred             EEecccCceeEEEecce-------eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         82 RKLGWGHFSTVWFTGSK-------TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        82 ~~LG~G~fg~Vy~a~~~-------~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ++||+|+||+||+|.++       +++|+....      .+.+.+|+.+|++++|        |||+++++++.    . 
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~H--------pnIv~~~g~~~----~-   79 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN--------PYIVRMIGICE----A-   79 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC--------TTBCCEEEEEE----S-
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCC--------CCCceEEEEec----c-
Confidence            46999999999999652       345543221      2457899999999988        77999998764    3 


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      ...||||||+ +|+|.+++....  .+++..+..++.||+.||.|||++ +||||||||+|||++.+ +.++++|||+++
T Consensus        80 ~~~~lvmE~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~-~iiHrDlKp~Nill~~~-~~~kl~DFGla~  155 (277)
T d1xbba_          80 ESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQ-HYAKISDFGLSK  155 (277)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEET-TEEEECCCTTCE
T ss_pred             CCEEEEEEcCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhC-CcccCCCcchhhccccc-Ccccccchhhhh
Confidence            3468999999 677777776543  599999999999999999999999 99999999999999665 899999999997


Q ss_pred             HhhhCCCC---CCcccCCCCccchhhhhhc
Q psy16752        228 LAATGHKL---PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       228 ~~~~~~~~---~~~~~gt~~~~aPE~l~~~  254 (284)
                      ........   .....||+.|+|||++.+.
T Consensus       156 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  185 (277)
T d1xbba_         156 ALRADENYYKAQTHGKWPVKWYAPECINYY  185 (277)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHHHHHC
T ss_pred             hccccccccccccccCCCceecCchhhcCC
Confidence            65443222   2245789999999998654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=3.2e-31  Score=228.85  Aligned_cols=168  Identities=23%  Similarity=0.315  Sum_probs=133.3

Q ss_pred             eccceEEEEEecccCceeEEEecce-----eEEEe--cCCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         74 FNNRYRVTRKLGWGHFSTVWFTGSK-----TQVLV--SPQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        74 ~~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++++|++.+.||+|+||+||+|.++     +++|+  .......+..|+.+++.+.|+       ++++.+...+.    
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~-------~~i~~~~~~~~----   73 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG-------VGIPTIRWCGA----   73 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTS-------TTCCCEEEEEE----
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCC-------CcccEEEEEEe----
Confidence            3468999999999999999999862     35554  233456788999999999873       33444444333    


Q ss_pred             CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeC--CCcEEEEecc
Q psy16752        147 NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVD--EARVKTLALN  224 (284)
Q Consensus       147 ~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~--~~~v~l~Dfg  224 (284)
                      .....++||||+++++...+.... ..+++..+..++.|++.||.|||++ |||||||||+|||++..  +..++++|||
T Consensus        74 ~~~~~~ivme~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDiKp~NIl~~~~~~~~~vkl~DFG  151 (299)
T d1ckia_          74 EGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFG  151 (299)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCS
T ss_pred             cCCEEEEEEEEcCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHhhccccccCCCceeeeeccC
Confidence            677899999999999888776544 4599999999999999999999999 99999999999998543  4579999999


Q ss_pred             chhHhhhCCC-------CCCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHK-------LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~-------~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|........       ...+.+||+.|+|||++.+.
T Consensus       152 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  188 (299)
T d1ckia_         152 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI  188 (299)
T ss_dssp             SCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTB
T ss_pred             cceeccccccccceeccccCCcCCCccccCHHHHhCC
Confidence            9986654321       22356899999999998775

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.8e-32  Score=237.55  Aligned_cols=176  Identities=24%  Similarity=0.361  Sum_probs=132.6

Q ss_pred             Ccccccccc-ee--ccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCc
Q psy16752         64 GYHPVKIGM-LF--NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDP  129 (284)
Q Consensus        64 ~~~~~~~~~-~~--~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~  129 (284)
                      .++|+.+|+ .+  .++|+++++||+|+||+||+|.++     +++|+....      ...+.+|+.+++.++|      
T Consensus         2 ~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~h------   75 (355)
T d2b1pa1           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH------   75 (355)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCC------
T ss_pred             CCEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCC------
Confidence            467888888 43  378999999999999999999873     356654321      2347789999999988      


Q ss_pred             ccchhccccccceEecc--CCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        130 YRERVVQLLDDFKICGV--NGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       130 ~~~~i~~l~~~~~~~~~--~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                        +||++++++|...+.  ...++|+||||+.+++++.+..    .+++..++.++.||+.||.|||++ ||+||||||+
T Consensus        76 --pnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~----~~~~~~i~~~~~qil~gl~~LH~~-giiHrDlKP~  148 (355)
T d2b1pa1          76 --KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPS  148 (355)
T ss_dssp             --TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGG
T ss_pred             --CCeeEEEEEEecccccccCceeEEEEeccchHHHHhhhc----CCCHHHHHHHHHHHHHHHHHhhhc-ccccccCCcc
Confidence              679999998753322  4579999999999998887742    489999999999999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.+ +.++++|||++...... ......+||+.|+|||++.+.
T Consensus       149 Nil~~~~-~~~kl~df~~~~~~~~~-~~~~~~~~t~~y~aPE~l~~~  193 (355)
T d2b1pa1         149 NIVVKSD-CTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  193 (355)
T ss_dssp             GEEECTT-CCEEECCCCC----------------CCTTCCHHHHTTC
T ss_pred             ccccccc-cceeeechhhhhccccc-cccccccccccccChhhhcCC
Confidence            9999554 88999999998766554 334466899999999999764

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-31  Score=234.11  Aligned_cols=168  Identities=23%  Similarity=0.362  Sum_probs=131.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+|++++.||+|+||+||+|.++     +++|+....     .+.+.+|+.+|+.++|        ++++++++.+....
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~h--------p~iv~~~~~~~~~~   79 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH--------ENIIGINDIIRAPT   79 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCC--------TTBCCCCEEECCSS
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCC--------CCCCcEEEEEeecc
Confidence            57999999999999999999863     366654332     2356789999999998        66888887764221


Q ss_pred             -cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 -VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 -~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                       ....++|++|++++++|.+.+...   ++++..++.++.||+.||.|||++ |||||||||+|||++ +.+.++|+|||
T Consensus        80 ~~~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~-~iiHRDIKp~NILl~-~~~~~kl~DfG  154 (345)
T d1pmea_          80 IEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLN-TTCDLKICDFG  154 (345)
T ss_dssp             TTTCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEC-TTCCEEECCCT
T ss_pred             ccccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCcceEEEC-CCCCEEEcccC
Confidence             133457788777799999888654   499999999999999999999999 999999999999995 45899999999


Q ss_pred             chhHhhhCCC---CCCcccCCCCccchhhhhhccc
Q psy16752        225 ATELAATGHK---LPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       225 ~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      +|........   .....+||+.|+|||++.....
T Consensus       155 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~  189 (345)
T d1pmea_         155 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG  189 (345)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCS
T ss_pred             ceeeccCCCccceeeccccccceechHHHhhcCCC
Confidence            9876544322   2346689999999999866544

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=227.11  Aligned_cols=164  Identities=15%  Similarity=0.237  Sum_probs=134.6

Q ss_pred             ceEEEEEecccCceeEEEecce----eEEEec---CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGSK----TQVLVS---PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~~----~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      +|++.++||+|+||+||+|+++    +++|..   ....+.+.+|+.++++++|        +||+++++++.    ...
T Consensus         5 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~H--------pnIv~~~g~~~----~~~   72 (258)
T d1k2pa_           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH--------EKLVQLYGVCT----KQR   72 (258)
T ss_dssp             CCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCC--------TTBCCEEEEEC----CSS
T ss_pred             HCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCC--------CceeeEEEEEe----eCC
Confidence            5889999999999999999863    344443   2345678999999999988        77999999876    677


Q ss_pred             EEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        150 HVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       150 ~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      .+++||||+ +|++..++.... ..+++..+..++.||+.||.|||+. ||+||||||+|||++. .+.++|+|||++..
T Consensus        73 ~~~iv~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~-~iiH~dlk~~Nill~~-~~~~kl~DfG~a~~  149 (258)
T d1k2pa_          73 PIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVND-QGVVKVSDFGLSRY  149 (258)
T ss_dssp             SEEEEEECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT-TBCCSCCSGGGEEECT-TCCEEECCCSSCCB
T ss_pred             ceEEEEEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhc-CcccccccceeEEEcC-CCcEEECcchhhee
Confidence            899999999 567777765544 3589999999999999999999999 9999999999999954 48999999999976


Q ss_pred             hhhCCC-CCCcccCCCCccchhhhhhcc
Q psy16752        229 AATGHK-LPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       229 ~~~~~~-~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      ...... ......||+.|+|||++.+.-
T Consensus       150 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~  177 (258)
T d1k2pa_         150 VLDDEYTSSVGSKFPVRWSPPEVLMYSK  177 (258)
T ss_dssp             CSSSSCCCCCCSCCCGGGCCHHHHHHCC
T ss_pred             ccCCCceeecccCCCCCcCCcHHhcCCC
Confidence            544432 223567999999999997643

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=8.4e-31  Score=226.46  Aligned_cols=166  Identities=17%  Similarity=0.231  Sum_probs=133.6

Q ss_pred             ccceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      .++|++.+.||+|+||+||+|+++          +++|.....     .+.+.+|+.+++.++|        +|++.+++
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h--------~niv~~~~   83 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN--------PNIVKLLG   83 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC--------TTBCCEEE
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCC--------CCccccee
Confidence            357999999999999999999753          355554322     2457899999999998        67999998


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhC
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK----------------------YRGIPLENVRSIIRQILQGLNYLHTK  196 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------------~~~~~~~~~~~i~~qi~~aL~~LH~~  196 (284)
                      ++.    ....++++|||+ +|+|.+++....                      ...+++..+..++.||+.||.|||++
T Consensus        84 ~~~----~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~  159 (301)
T d1lufa_          84 VCA----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER  159 (301)
T ss_dssp             EEC----SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eec----cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC
Confidence            776    677899999999 778888875432                      12378999999999999999999999


Q ss_pred             CCcEecCCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        197 CRIIHTDIKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       197 ~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                       +||||||||+||||+.+ +.+||+|||+|+.......  ...+.+||++|+|||.+.+.
T Consensus       160 -~ivHrDlKp~NILld~~-~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  217 (301)
T d1lufa_         160 -KFVHRDLATRNCLVGEN-MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN  217 (301)
T ss_dssp             -TCCCSCCSGGGEEECGG-GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC
T ss_pred             -CeEeeEEcccceEECCC-CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccC
Confidence             99999999999999654 8999999999987654432  23366899999999999764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-30  Score=225.46  Aligned_cols=170  Identities=16%  Similarity=0.198  Sum_probs=130.3

Q ss_pred             ccceEEEEEecccCceeEEEecce---eEEEecCC-CChhhHHHHHHH--HhhhcCCCCCcccchhccccccceEeccCC
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ-FPETALDEIKLL--KCVRDGDVNDPYRERVVQLLDDFKICGVNG  148 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~-~~~~~~~E~~~l--~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~  148 (284)
                      ..+|.+.+.||+|+||+||+|+.+   +++|+... .......|.+++  ..++|        +||+++++++.......
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~H--------pnIv~~~~~~~~~~~~~   73 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH--------ENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC--------TTBCCEEEEEEEECSSS
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCC--------CcCcceEEEEEeCCCcc
Confidence            356999999999999999999863   35554322 223344454444  34555        78999999876555566


Q ss_pred             eEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh--------CCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        149 THVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT--------KCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       149 ~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~--------~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      ..+|+||||+ +|+|.+.+.+.   .+++..+..++.|++.||.|||+        + |||||||||+||||+. ++.+|
T Consensus        74 ~~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~-~IvHrDlKp~NILl~~-~~~~K  148 (303)
T d1vjya_          74 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKK-NGTCC  148 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCCGGGEEECT-TSCEE
T ss_pred             eEEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CeeccccCccceEEcC-CCCeE
Confidence            7899999999 77888888654   38999999999999999999996        6 8999999999999954 48999


Q ss_pred             EEeccchhHhhhCCC----CCCcccCCCCccchhhhhhccch
Q psy16752        220 TLALNATELAATGHK----LPVSFCSTAPVQEYSELSRRMSK  257 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~----~~~~~~gt~~~~aPE~l~~~~~~  257 (284)
                      |+|||++........    .....+||++|+|||++.+....
T Consensus       149 l~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  190 (303)
T d1vjya_         149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM  190 (303)
T ss_dssp             ECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCT
T ss_pred             EEecCccccccCCCcceeccccceecccCcCChhhccccccc
Confidence            999999886654332    23356899999999999876543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=227.31  Aligned_cols=170  Identities=24%  Similarity=0.372  Sum_probs=133.0

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEec------CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVS------PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++++.||+|+||+||+|.++     +++|+.      ......+.+|+.+|+.++|        +|++.+++.+...
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h--------~nii~~~~~~~~~   81 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH--------ENVVNLIEICRTK   81 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCC--------TTBCCEEEEEEC-
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcC--------CCccceEeeeecc
Confidence            57999999999999999999863     466653      2334567899999999998        5677777765421


Q ss_pred             ----ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEE
Q psy16752        145 ----GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKT  220 (284)
Q Consensus       145 ----~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l  220 (284)
                          ......+|+||||++++++..+.... ..+++..++.++.||+.||.|||++ |||||||||+|||++.+ +.+++
T Consensus        82 ~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~-~~~~~~~~~~i~~qil~~l~~lH~~-~ivHrDlKp~NILl~~~-~~~kl  158 (318)
T d3blha1          82 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRD-GVLKL  158 (318)
T ss_dssp             ---------CEEEEEECCCEEHHHHHTCTT-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTT-SCEEE
T ss_pred             cccccccCceEEEEEeccCCCccchhhhcc-cccccHHHHHHHHHHHHHHHHhccC-CEEecCcCchheeecCC-CcEEe
Confidence                12345789999999888887665543 4699999999999999999999999 99999999999999554 89999


Q ss_pred             EeccchhHhhhCC----CCCCcccCCCCccchhhhhhccc
Q psy16752        221 LALNATELAATGH----KLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       221 ~Dfg~a~~~~~~~----~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      +|||++.......    ....+.+||+.|+|||++.+...
T Consensus       159 ~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~  198 (318)
T d3blha1         159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERD  198 (318)
T ss_dssp             CCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSS
T ss_pred             eecceeeecccccccccccccceecCHHHhhHHHHcCCCC
Confidence            9999987544222    23345689999999999976543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.6e-31  Score=224.98  Aligned_cols=163  Identities=20%  Similarity=0.229  Sum_probs=124.5

Q ss_pred             cceEEEEEecccCceeEEEecce--------eEEEecCC-------CChhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK--------TQVLVSPQ-------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|++++.||+|+||+||+|...        +++|....       ..+.+.+|+.+++.++|        +||++++++
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H--------~nIv~~~g~   79 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH--------RNLIRLYGV   79 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC--------TTBCCEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCC--------CCEEEEEEE
Confidence            56999999999999999999752        23443221       13467899999999988        779999997


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVK  219 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~  219 (284)
                      +.    . ..+++||||+ +|++.+.+.... ..+++..++.++.||+.||.|||++ +|+||||||+||||+.+ +.++
T Consensus        80 ~~----~-~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDikp~NIll~~~-~~vk  151 (273)
T d1u46a_          80 VL----T-PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATR-DLVK  151 (273)
T ss_dssp             EC----S-SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEET-TEEE
T ss_pred             Ee----e-cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhC-CEeeeeecHHHhccccc-ccee
Confidence            75    3 4678999999 778887776654 3599999999999999999999999 99999999999999776 7999


Q ss_pred             EEeccchhHhhhCCC---CCCcccCCCCccchhhhhhc
Q psy16752        220 TLALNATELAATGHK---LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       220 l~Dfg~a~~~~~~~~---~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ++|||+++.......   .....+|++.|+|||++.+.
T Consensus       152 l~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  189 (273)
T d1u46a_         152 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR  189 (273)
T ss_dssp             ECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHC
T ss_pred             eccchhhhhcccCCCcceecCccccCcccCCHHHHhCC
Confidence            999999886544322   22345688899999999764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-30  Score=224.20  Aligned_cols=164  Identities=16%  Similarity=0.195  Sum_probs=130.6

Q ss_pred             cceEEEEEecccCceeEEEeccee-------EEEec-----CCCChhhHHHHHHHHhh-hcCCCCCcccchhccccccce
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSKT-------QVLVS-----PQFPETALDEIKLLKCV-RDGDVNDPYRERVVQLLDDFK  142 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~~-------~~~~~-----~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~l~~~~~  142 (284)
                      ++|++.++||+|+||+||+|.++.       +++..     ....+.+.+|+.+|.++ +|        +||+++++++.
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~H--------pnIv~~~~~~~   81 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--------PNIINLLGACE   81 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC--------TTBCCEEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCC--------CCEeeEEEEEe
Confidence            469999999999999999998742       23332     11345688999999998 56        77999999887


Q ss_pred             EeccCCeEEEEEeccC-CccHHHHHHhh--------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCC
Q psy16752        143 ICGVNGTHVCMVFEVL-GHNLLKLIVKS--------------KYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPE  207 (284)
Q Consensus       143 ~~~~~~~~~~iv~e~~-~~~l~~~~~~~--------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~  207 (284)
                          ....+|+||||+ +|+|.+++...              ....+++..+..++.||+.||.|||++ +||||||||+
T Consensus        82 ----~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~-~iiHrDlkp~  156 (309)
T d1fvra_          82 ----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAAR  156 (309)
T ss_dssp             ----ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGG
T ss_pred             ----cCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC-Cccccccccc
Confidence                778899999999 78888887643              224589999999999999999999999 9999999999


Q ss_pred             CeeEeeCCCcEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        208 NVLLCVDEARVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       208 NIll~~~~~~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      |||++.+ +.++|+|||+|....... .....+||++|+|||.+.+.
T Consensus       157 NIL~~~~-~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~l~~~  201 (309)
T d1fvra_         157 NILVGEN-YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYS  201 (309)
T ss_dssp             GEEECGG-GCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHC
T ss_pred             eEEEcCC-CceEEccccccccccccc-cccceecCCcccchHHhccC
Confidence            9999555 899999999987554432 22356799999999999654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.7e-30  Score=219.87  Aligned_cols=165  Identities=24%  Similarity=0.355  Sum_probs=137.5

Q ss_pred             cceEEEEEecccCceeEEEecce-----eEEEecCC------CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEe
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQ------FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKIC  144 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~  144 (284)
                      ++|++++.||+|+||+||+|+++     +++|+...      ....+.+|+.+++.++|        +||+++++++.  
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h--------~niv~~~~~~~--   71 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH--------KNIVRLHDVLH--   71 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC--------TTBCCEEEEEE--
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCc--------CCEEeeccccc--
Confidence            47999999999999999999873     36665321      13556899999999988        67999999887  


Q ss_pred             ccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        145 GVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       145 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                        .....++||+++.++++..+.... +.+++..++.++.|++.||.|||++ |||||||||+|||++. .+.++++|||
T Consensus        72 --~~~~~~iv~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~q~~~aL~~lH~~-~IvHrDiKP~NIli~~-~~~~kl~DFG  146 (292)
T d1unla_          72 --SDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINR-NGELKLANFG  146 (292)
T ss_dssp             --CSSEEEEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECT-TCCEEECCCT
T ss_pred             --cccceeEEeeeccccccccccccc-cccchhHHHHHHHHHHHHHHHhhcC-CEeeecccCccccccc-CCceeeeecc
Confidence              888999999999776666665544 4689999999999999999999999 9999999999999954 4799999999


Q ss_pred             chhHhhhCCCCCCcccCCCCccchhhhhhcc
Q psy16752        225 ATELAATGHKLPVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       225 ~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~  255 (284)
                      .|..............+++.|+|||++.+.-
T Consensus       147 ~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  177 (292)
T d1unla_         147 LARAFGIPVRCYSAEVVTLWYRPPDVLFGAK  177 (292)
T ss_dssp             TCEECCSCCSCCCSCCSCGGGCCHHHHTTCS
T ss_pred             hhhcccCCCccceeeccccchhhhhHhccCC
Confidence            9987766655555667889999999987653

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-30  Score=219.98  Aligned_cols=163  Identities=16%  Similarity=0.210  Sum_probs=125.5

Q ss_pred             cceEEEEEecccCceeEEEecce---eEEEecCC--CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeE
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK---TQVLVSPQ--FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTH  150 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~---~~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  150 (284)
                      ++|++.+.||+|+||.||+|.++   .++|....  ..+.+.+|+.++++++|        +||+++++++.   .....
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~H--------pnIv~~~g~~~---~~~~~   75 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH--------SNLVQLLGVIV---EEKGG   75 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCC--------TTBCCEEEEEC---CC--C
T ss_pred             HHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCC--------CCEeeEEEEEE---ecCCc
Confidence            46999999999999999999874   34554432  35678899999999988        77999998653   13456


Q ss_pred             EEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEeccchhHh
Q psy16752        151 VCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALNATELA  229 (284)
Q Consensus       151 ~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg~a~~~  229 (284)
                      +|+||||+ +|+|.+++.......+++..++.++.||+.||.|||+. +||||||||+|||++. ++.++++|||++...
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~-~ivH~dlkp~Nil~~~-~~~~kl~dfg~s~~~  153 (262)
T d1byga_          76 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSE-DNVAKVSDFGLTKEA  153 (262)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECT-TSCEEECCCCC----
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC-ceeccccchHhheecC-CCCEeecccccceec
Confidence            89999999 78888888665433589999999999999999999999 9999999999999955 489999999998765


Q ss_pred             hhCCCCCCcccCCCCccchhhhhhc
Q psy16752        230 ATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       230 ~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ...   .....+|++|+|||++.+.
T Consensus       154 ~~~---~~~~~~~~~y~aPE~l~~~  175 (262)
T d1byga_         154 SST---QDTGKLPVKWTAPEALREK  175 (262)
T ss_dssp             -----------CCTTTSCHHHHHHC
T ss_pred             CCC---CccccccccCCChHHHhCC
Confidence            432   3355789999999999654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.3e-30  Score=220.31  Aligned_cols=167  Identities=18%  Similarity=0.251  Sum_probs=128.9

Q ss_pred             ccceEEEEEecccCceeEEEecce------------eEEEecCCC-----ChhhHHHHHHHHhh-hcCCCCCcccchhcc
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK------------TQVLVSPQF-----PETALDEIKLLKCV-RDGDVNDPYRERVVQ  136 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~------------~~~~~~~~~-----~~~~~~E~~~l~~l-~~~~~~~~~~~~i~~  136 (284)
                      .++|.+.+.||+|+||.||+|+..            +++|.....     ...+.+|...+.++ +|        +||++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~H--------pnIv~   83 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--------KNIIN   83 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCC--------TTBCC
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCC--------CeEEe
Confidence            357999999999999999999752            234443222     24466788888888 55        77999


Q ss_pred             ccccceEeccCCeEEEEEeccC-CccHHHHHHhhC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEe
Q psy16752        137 LLDDFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIH  201 (284)
Q Consensus       137 l~~~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givH  201 (284)
                      +++++.    ....+++||||+ +|++.+++....              ...+++..++.++.||+.||.|||+. +|||
T Consensus        84 ~~~~~~----~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~-~ivH  158 (299)
T d1fgka_          84 LLGACT----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIH  158 (299)
T ss_dssp             EEEEEC----SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred             cccccc----cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC-CEEe
Confidence            999876    778899999999 778888886543              13489999999999999999999999 9999


Q ss_pred             cCCCCCCeeEeeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhcc
Q psy16752        202 TDIKPENVLLCVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       202 rDiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~~  255 (284)
                      |||||+|||++.+ +.++|+|||++.........  ....+||++|+|||++.+..
T Consensus       159 rDiKp~NiLl~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~  213 (299)
T d1fgka_         159 RDLAARNVLVTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI  213 (299)
T ss_dssp             SCCSGGGEEECTT-CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCC
T ss_pred             eeecccceeecCC-CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCC
Confidence            9999999999554 89999999999876654432  23567999999999997643

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.6e-30  Score=222.22  Aligned_cols=165  Identities=20%  Similarity=0.241  Sum_probs=133.2

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCC-----ChhhHHHHHHHHhhh-cCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQF-----PETALDEIKLLKCVR-DGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~-----~~~~~~E~~~l~~l~-~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++.++||+|+||.||+|.++          +++|.....     ...+.+|+.+++.+. |        +||+++++
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~H--------pnIv~~~g   94 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--------MNIVNLLG   94 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--------TTBCCEEE
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCC--------CCEEEEEE
Confidence            57999999999999999999752          355554322     234678999999984 5        77999999


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhC----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEec
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSK----------------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHT  202 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHr  202 (284)
                      .+.    ....+|+||||+ +|++.+++....                ...+++..+..++.||+.||.|||++ ++|||
T Consensus        95 ~~~----~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~-~ivHr  169 (311)
T d1t46a_          95 ACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHR  169 (311)
T ss_dssp             EEC----SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCS
T ss_pred             EEe----eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-Ceeec
Confidence            876    777899999999 677777776532                12488999999999999999999999 99999


Q ss_pred             CCCCCCeeEeeCCCcEEEEeccchhHhhhCCC--CCCcccCCCCccchhhhhhc
Q psy16752        203 DIKPENVLLCVDEARVKTLALNATELAATGHK--LPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       203 DiKp~NIll~~~~~~v~l~Dfg~a~~~~~~~~--~~~~~~gt~~~~aPE~l~~~  254 (284)
                      ||||+|||++.+ +.++++|||.++.......  .....+||++|+|||++.+.
T Consensus       170 DLKp~NIl~~~~-~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  222 (311)
T d1t46a_         170 DLAARNILLTHG-RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC  222 (311)
T ss_dssp             CCSGGGEEEETT-TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHC
T ss_pred             cccccccccccc-CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCC
Confidence            999999999554 8999999999987654332  22356899999999999754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.7e-30  Score=222.31  Aligned_cols=164  Identities=20%  Similarity=0.303  Sum_probs=136.2

Q ss_pred             cceEEEEEecccCceeEEEecc--------eeEEEecC--------CCChhhHHHHHHHHhhhcCCCCCcccchhccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGS--------KTQVLVSP--------QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLD  139 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~--------~~~~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~  139 (284)
                      ++|++++.||+|+||+||+|.+        .+++|+..        ...+.+.+|+.++++++|       ++||+++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h-------~pnIv~~~~   96 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ-------SPFLVTLHY   96 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHT-------CTTBCCEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccC-------CCeEEEeee
Confidence            4699999999999999999964        23555422        234667899999999998       367999998


Q ss_pred             cceEeccCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcE
Q psy16752        140 DFKICGVNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARV  218 (284)
Q Consensus       140 ~~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v  218 (284)
                      .+.    ....++++|||+ +++|.+.+....  .+++..+..++.||+.||.|||++ +||||||||+|||++.+ +.+
T Consensus        97 ~~~----~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~-~ivHrDiKp~Nill~~~-~~v  168 (322)
T d1vzoa_          97 AFQ----TETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSN-GHV  168 (322)
T ss_dssp             EEE----ETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT-SCE
T ss_pred             eec----cCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcC-CEEeccCCccceeecCC-CCE
Confidence            887    778899999999 778888887665  488999999999999999999999 99999999999999655 899


Q ss_pred             EEEeccchhHhhh-CCCCCCcccCCCCccchhhhhhc
Q psy16752        219 KTLALNATELAAT-GHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       219 ~l~Dfg~a~~~~~-~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +|+|||++..... ......+..||++|+|||++.+.
T Consensus       169 kL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~  205 (322)
T d1vzoa_         169 VLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG  205 (322)
T ss_dssp             EESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTC
T ss_pred             EEeeccchhhhcccccccccccccccccchhHHhhcC
Confidence            9999999875433 22344577899999999999653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-29  Score=217.75  Aligned_cols=166  Identities=17%  Similarity=0.242  Sum_probs=133.4

Q ss_pred             cceEEEEEecccCceeEEEecce----------eEEEecCCCC-----hhhHHHHHHHHhhhcCCCCCcccchhcccccc
Q psy16752         76 NRYRVTRKLGWGHFSTVWFTGSK----------TQVLVSPQFP-----ETALDEIKLLKCVRDGDVNDPYRERVVQLLDD  140 (284)
Q Consensus        76 ~~y~i~~~LG~G~fg~Vy~a~~~----------~~~~~~~~~~-----~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~  140 (284)
                      ++|++.+.||+|+||+||+|.++          +++|......     ..+.+|+.+++++.|        +||+++++.
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h--------~nIv~~~~~   91 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC--------HHVVRLLGV   91 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC--------TTBCCEEEE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCC--------CCEeeeeeE
Confidence            57999999999999999999763          2455443221     246799999999988        679999997


Q ss_pred             ceEeccCCeEEEEEeccC-CccHHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        141 FKICGVNGTHVCMVFEVL-GHNLLKLIVKSK--------YRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       141 ~~~~~~~~~~~~iv~e~~-~~~l~~~~~~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      +.    .....++||||+ +|+|.+++....        ...+++..+..++.|++.||.|||++ +||||||||+|||+
T Consensus        92 ~~----~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~-~ivHrDlk~~NiLl  166 (308)
T d1p4oa_          92 VS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMV  166 (308)
T ss_dssp             EC----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEE
T ss_pred             Ee----cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeeceEcCCceee
Confidence            76    677899999999 778888776432        12368899999999999999999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchhHhhhCCCC--CCcccCCCCccchhhhhhcc
Q psy16752        212 CVDEARVKTLALNATELAATGHKL--PVSFCSTAPVQEYSELSRRM  255 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~~~~~~~~~--~~~~~gt~~~~aPE~l~~~~  255 (284)
                      + .++.++|+|||+|+........  .....||+.|+|||.+.+..
T Consensus       167 d-~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~  211 (308)
T d1p4oa_         167 A-EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV  211 (308)
T ss_dssp             C-TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCC
T ss_pred             c-CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCC
Confidence            5 4589999999999866544322  23447899999999997654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=8.2e-29  Score=218.85  Aligned_cols=186  Identities=43%  Similarity=0.636  Sum_probs=144.1

Q ss_pred             cccccccceec-cceEEEEEecccCceeEEEecce-----eEEEecCCC---ChhhHHHHHHHHhhhcCCCCCc---ccc
Q psy16752         65 YHPVKIGMLFN-NRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF---PETALDEIKLLKCVRDGDVNDP---YRE  132 (284)
Q Consensus        65 ~~~~~~~~~~~-~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~---~~~~~~E~~~l~~l~~~~~~~~---~~~  132 (284)
                      ++|+.+|+.+. +||+++++||+|+||+||+|+++     +++|+....   .+.+.+|+.+++.+.|++....   .++
T Consensus         1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~   80 (362)
T d1q8ya_           1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN   80 (362)
T ss_dssp             CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             CCCCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcC
Confidence            46888999885 68999999999999999999763     356654332   3556889999999998765432   567


Q ss_pred             hhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCcEecCCCCCCeeE
Q psy16752        133 RVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHT-KCRIIHTDIKPENVLL  211 (284)
Q Consensus       133 ~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~givHrDiKp~NIll  211 (284)
                      +|+++++++...+......++++++..++............+++..++.++.||+.||.|||+ . ||+||||||+||||
T Consensus        81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~-~IvHrDlKp~NIll  159 (362)
T d1q8ya_          81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC-GIIHTDIKPENVLM  159 (362)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT-CEECSCCSGGGEEE
T ss_pred             ceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc-CcccccCChhHeee
Confidence            899999887644444444445555556666666665555679999999999999999999998 6 99999999999999


Q ss_pred             eeCCC-----cEEEEeccchhHhhhCCCCCCcccCCCCccchhhhhhc
Q psy16752        212 CVDEA-----RVKTLALNATELAATGHKLPVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       212 ~~~~~-----~v~l~Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~  254 (284)
                      +.++.     .++++|||.+.....   .....+||+.|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~kl~dfg~s~~~~~---~~~~~~gt~~y~aPE~~~~~  204 (362)
T d1q8ya_         160 EIVDSPENLIQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLLGA  204 (362)
T ss_dssp             EEEETTTTEEEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHHTC
T ss_pred             eccCcccccceeeEeeccccccccc---ccccccccccccChhhcccc
Confidence            76532     599999999875443   33467899999999988764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-29  Score=222.20  Aligned_cols=166  Identities=25%  Similarity=0.365  Sum_probs=127.2

Q ss_pred             ccceEEEEEecccCceeEEEecce-----eEEEecCCC------ChhhHHHHHHHHhhhcCCCCCcccchhccccccceE
Q psy16752         75 NNRYRVTRKLGWGHFSTVWFTGSK-----TQVLVSPQF------PETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKI  143 (284)
Q Consensus        75 ~~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~~~~~------~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~  143 (284)
                      .++|++++.||+|+||+||+|.++     +++|+....      .+.+.+|+.+|+.++|        ++++++++++..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h--------~~iv~~~~~~~~   88 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH--------ENVIGLLDVFTP   88 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCC--------TTBCCCSEEECS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCC--------CCeeeEEEEEee
Confidence            468999999999999999999863     366665432      2346789999999998        668888887652


Q ss_pred             ec--cCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEE
Q psy16752        144 CG--VNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTL  221 (284)
Q Consensus       144 ~~--~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~  221 (284)
                      ..  .....+++++++.+|+|.+.+...   ++++..++.++.||+.||.|||++ |||||||||+|||++.+ +.++++
T Consensus        89 ~~~~~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~-giiHrDiKp~NILi~~~-~~~kl~  163 (348)
T d2gfsa1          89 ARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNED-CELKIL  163 (348)
T ss_dssp             CSSTTTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTT-CCEEEC
T ss_pred             ccccccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhC-CCcccccCCcccccccc-cccccc
Confidence            21  133456666666688888877443   499999999999999999999999 99999999999999544 899999


Q ss_pred             eccchhHhhhCCCCCCcccCCCCccchhhhhhccc
Q psy16752        222 ALNATELAATGHKLPVSFCSTAPVQEYSELSRRMS  256 (284)
Q Consensus       222 Dfg~a~~~~~~~~~~~~~~gt~~~~aPE~l~~~~~  256 (284)
                      |||++.....   ...+..||+.|+|||++.+...
T Consensus       164 dfg~a~~~~~---~~~~~~g~~~y~apE~~~~~~~  195 (348)
T d2gfsa1         164 DFGLARHTDD---EMTGYVATRWYRAPEIMLNWMH  195 (348)
T ss_dssp             CC----CCTG---GGSSSCHHHHTSCHHHHTTCSC
T ss_pred             ccchhcccCc---ccccccccccccCchhhcCCcc
Confidence            9999865432   2346689999999999876543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-28  Score=213.21  Aligned_cols=162  Identities=16%  Similarity=0.173  Sum_probs=126.0

Q ss_pred             EEEEEecccCceeEEEecce--------eEEEecCC-----CChhhHHHHHHHHhhhcCCCCCcccchhccccccceEec
Q psy16752         79 RVTRKLGWGHFSTVWFTGSK--------TQVLVSPQ-----FPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICG  145 (284)
Q Consensus        79 ~i~~~LG~G~fg~Vy~a~~~--------~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~  145 (284)
                      .+.++||+|+||+||+|.+.        +++|....     ..+.+.+|+.+|++++|        +||+++++++.   
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H--------pnIv~~~g~~~---   98 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH--------PNVLSLLGICL---   98 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCC--------TTBCCCCEEEE---
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC--------CCEeEEeEEEE---
Confidence            33678999999999999752        24444322     12557899999999998        77999998653   


Q ss_pred             cCCeEEEEEeccC-CccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeEeeCCCcEEEEecc
Q psy16752        146 VNGTHVCMVFEVL-GHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLLCVDEARVKTLALN  224 (284)
Q Consensus       146 ~~~~~~~iv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll~~~~~~v~l~Dfg  224 (284)
                      .....+++||||+ ++++.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||||+ +.+.++|+|||
T Consensus        99 ~~~~~~~lv~E~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~-~iiHrDLK~~NILl~-~~~~~kL~DFG  175 (311)
T d1r0pa_          99 RSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLD-EKFTVKVADFG  175 (311)
T ss_dssp             ETTTEEEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEC-TTCCEEECSSG
T ss_pred             ecCCceEEEEEEeecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhccc-CcccCCccHHhEeEC-CCCCEEEeccc
Confidence            1456799999999 5555555543 334588899999999999999999999 999999999999995 45899999999


Q ss_pred             chhHhhhCCCC----CCcccCCCCccchhhhhhc
Q psy16752        225 ATELAATGHKL----PVSFCSTAPVQEYSELSRR  254 (284)
Q Consensus       225 ~a~~~~~~~~~----~~~~~gt~~~~aPE~l~~~  254 (284)
                      +++........    .....||+.|+|||++...
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  209 (311)
T d1r0pa_         176 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ  209 (311)
T ss_dssp             GGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHC
T ss_pred             chhhccccccccceecccccccccccChHHHhcC
Confidence            99866543322    2245689999999998653

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.82  E-value=9.9e-21  Score=152.00  Aligned_cols=123  Identities=18%  Similarity=0.197  Sum_probs=87.1

Q ss_pred             eEEEEEecccCceeEEEecc----eeEEEecCCC----------------------ChhhHHHHHHHHhhhcCCCCCccc
Q psy16752         78 YRVTRKLGWGHFSTVWFTGS----KTQVLVSPQF----------------------PETALDEIKLLKCVRDGDVNDPYR  131 (284)
Q Consensus        78 y~i~~~LG~G~fg~Vy~a~~----~~~~~~~~~~----------------------~~~~~~E~~~l~~l~~~~~~~~~~  131 (284)
                      +.+.++||+|+||+||+|.+    .+++|+....                      ......|...+.++.+        
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--------   73 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG--------   73 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT--------
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccC--------
Confidence            46789999999999999975    2355542110                      0112346666666665        


Q ss_pred             chhccccccceEeccCCeEEEEEeccCCccHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhCCCcEecCCCCCCeeE
Q psy16752        132 ERVVQLLDDFKICGVNGTHVCMVFEVLGHNLLKLIVKSKYRGIPLENVRSIIRQILQGLNYLHTKCRIIHTDIKPENVLL  211 (284)
Q Consensus       132 ~~i~~l~~~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~givHrDiKp~NIll  211 (284)
                      .+++..++..        ..+++|||+++....        .++...+..++.|++.+|.|||++ ||+||||||+|||+
T Consensus        74 ~~v~~~~~~~--------~~~lvme~~~~~~~~--------~l~~~~~~~i~~ql~~~l~~lH~~-giiHrDiKP~NILv  136 (191)
T d1zara2          74 LAVPKVYAWE--------GNAVLMELIDAKELY--------RVRVENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLV  136 (191)
T ss_dssp             SSSCCEEEEE--------TTEEEEECCCCEEGG--------GCCCSCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEE
T ss_pred             CCcceEEEec--------CCEEEEEeecccccc--------chhhHHHHHHHHHHHHHHHHHhhC-CEEEccCChhheee
Confidence            3344444321        127999999765331        145555778999999999999999 99999999999999


Q ss_pred             eeCCCcEEEEeccchh
Q psy16752        212 CVDEARVKTLALNATE  227 (284)
Q Consensus       212 ~~~~~~v~l~Dfg~a~  227 (284)
                      +.  ..++++|||.|.
T Consensus       137 ~~--~~~~liDFG~a~  150 (191)
T d1zara2         137 SE--EGIWIIDFPQSV  150 (191)
T ss_dssp             ET--TEEEECCCTTCE
T ss_pred             eC--CCEEEEECCCcc
Confidence            53  468999999874

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.99  E-value=2e-05  Score=63.93  Aligned_cols=76  Identities=9%  Similarity=0.030  Sum_probs=45.8

Q ss_pred             ceEEEEEecccCceeEEEecc---eeEEEecC----CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCe
Q psy16752         77 RYRVTRKLGWGHFSTVWFTGS---KTQVLVSP----QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGT  149 (284)
Q Consensus        77 ~y~i~~~LG~G~fg~Vy~a~~---~~~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~  149 (284)
                      .|++.+..+.++.+.||+...   +..++...    .....+.+|..++..+... +      -+.+++....    ...
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~-v------pvP~vl~~~~----~~~   83 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK-L------PVPKVLHFER----HDG   83 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTT-S------CCCCEEEEEE----ETT
T ss_pred             ceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhcc-C------CCCcEEEEEe----cCC
Confidence            477777665566678997653   23444332    2244578899988887541 1      1334444333    456


Q ss_pred             EEEEEeccCCccHH
Q psy16752        150 HVCMVFEVLGHNLL  163 (284)
Q Consensus       150 ~~~iv~e~~~~~l~  163 (284)
                      ..++||+++.|...
T Consensus        84 ~~~lv~~~l~G~~~   97 (263)
T d1j7la_          84 WSNLLMSEADGVLC   97 (263)
T ss_dssp             EEEEEEECCSSEEH
T ss_pred             ceEEEEEecccccc
Confidence            78999999966443

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.52  E-value=0.0002  Score=57.43  Aligned_cols=68  Identities=13%  Similarity=0.041  Sum_probs=40.1

Q ss_pred             EecccC-ceeEEEecc----eeEEEecC-CCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEeccCCeEEEEEec
Q psy16752         83 KLGWGH-FSTVWFTGS----KTQVLVSP-QFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGVNGTHVCMVFE  156 (284)
Q Consensus        83 ~LG~G~-fg~Vy~a~~----~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~iv~e  156 (284)
                      .+..|. -+.||+...    +..+|... .....+..|..+++.+....+.      +.+++....    .....++||+
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~gvp------vP~v~~~~~----~~~~~~~v~~   86 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVP------CAAVLDVVT----EAGRDWLLLG   86 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCC------BCCEEEEEE----CSSCEEEEEE
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccCHhHHHHHHHHHHHHHhcCCC------CCceeeecc----cccceEEEEE
Confidence            444443 357787654    23444433 3345678899999988764321      333443322    4567889999


Q ss_pred             cCCc
Q psy16752        157 VLGH  160 (284)
Q Consensus       157 ~~~~  160 (284)
                      ++.|
T Consensus        87 ~i~G   90 (255)
T d1nd4a_          87 EVPG   90 (255)
T ss_dssp             CCSS
T ss_pred             eeec
Confidence            9954

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.30  E-value=0.00065  Score=58.46  Aligned_cols=28  Identities=14%  Similarity=0.242  Sum_probs=23.5

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      .++|+|+.|.|||++.  +.++++||..|.
T Consensus       224 ~LiHGDl~~gNIlv~~--~~~~vID~E~a~  251 (392)
T d2pula1         224 TLIHGDLHTGSIFASE--HETKVIDPEFAF  251 (392)
T ss_dssp             EEECSCCCGGGEEECS--SCEEECCCTTCE
T ss_pred             ceeccCCcCCceeEcC--CceEEechhhcc
Confidence            5899999999999954  358999998754

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.03  E-value=0.032  Score=45.52  Aligned_cols=29  Identities=21%  Similarity=0.269  Sum_probs=24.6

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchh
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATE  227 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~  227 (284)
                      |+||+|+.++||+++.+ ...-++||+.+.
T Consensus       184 giIHgDl~~dNvl~~~~-~v~gvIDF~~~~  212 (316)
T d2ppqa1         184 GVIHADLFQDNVFFLGD-ELSGLIDFYFAC  212 (316)
T ss_dssp             EEECSCCCGGGEEEETT-EEEEECCCTTCE
T ss_pred             ccccCCcchhhhhcccc-cceeEecccccc
Confidence            89999999999999543 566899999865

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.54  E-value=0.063  Score=45.37  Aligned_cols=65  Identities=11%  Similarity=0.123  Sum_probs=37.0

Q ss_pred             EEEecccCceeEEEecce------------eEEEec--CCCChhhHHHHHHHHhhhcCCCCCcccchhccccccceEecc
Q psy16752         81 TRKLGWGHFSTVWFTGSK------------TQVLVS--PQFPETALDEIKLLKCVRDGDVNDPYRERVVQLLDDFKICGV  146 (284)
Q Consensus        81 ~~~LG~G~fg~Vy~a~~~------------~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i~~l~~~~~~~~~  146 (284)
                      ++.|+.|--=.+|++...            ..+.+.  ........+|..+++.+...++       .++++..+.    
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls~~gl-------~Pkll~~~~----  115 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHL-------GPKLYGIFS----  115 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTS-------SSCEEEEET----
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHHhCCC-------CCeEEEEcC----
Confidence            356777777788887531            222221  2223446689999998876332       223444332    


Q ss_pred             CCeEEEEEeccCCc
Q psy16752        147 NGTHVCMVFEVLGH  160 (284)
Q Consensus       147 ~~~~~~iv~e~~~~  160 (284)
                      +    .+||+|+.|
T Consensus       116 ~----g~I~efi~g  125 (395)
T d1nw1a_         116 G----GRLEEYIPS  125 (395)
T ss_dssp             T----EEEECCCCE
T ss_pred             C----ceEEEEecc
Confidence            2    478888854

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=91.09  E-value=0.091  Score=43.08  Aligned_cols=28  Identities=21%  Similarity=0.240  Sum_probs=22.6

Q ss_pred             CcEecCCCCCCeeEeeCCCcEEEEeccchhH
Q psy16752        198 RIIHTDIKPENVLLCVDEARVKTLALNATEL  228 (284)
Q Consensus       198 givHrDiKp~NIll~~~~~~v~l~Dfg~a~~  228 (284)
                      ++||+|+.|.|||++ + + ..++||+.+..
T Consensus       193 ~liHgDlh~~NvL~~-~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWR-D-G-PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEES-S-S-EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEe-C-C-ceEEechhccc
Confidence            699999999999993 3 3 45799998763