Query psy16754
Match_columns 127
No_of_seqs 67 out of 69
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 21:09:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kd2_A FAS apoptotic inhibitor 100.0 4E-44 1.4E-48 254.5 10.2 81 46-126 8-88 (94)
2 3mx7_A FAS apoptotic inhibitor 99.8 3.4E-20 1.1E-24 130.7 5.1 45 1-45 45-90 (90)
3 3mx7_A FAS apoptotic inhibitor 98.3 8.4E-06 2.9E-10 57.2 9.6 73 50-126 5-85 (90)
4 4ffh_A Levan fructotransferase 81.5 3.1 0.00011 35.6 6.4 32 60-91 424-456 (492)
5 3kf3_A Invertase; GH32, glycop 80.1 4.7 0.00016 34.9 7.1 31 60-90 449-480 (509)
6 3lig_A Fructosyltransferase; f 79.7 6.5 0.00022 35.0 8.0 56 50-105 555-619 (634)
7 2kd2_A FAS apoptotic inhibitor 76.0 4.1 0.00014 28.4 4.5 34 8-43 55-91 (94)
8 1w2t_A Beta fructosidase; hydr 75.0 6.2 0.00021 32.6 6.2 30 60-90 379-409 (432)
9 3pij_A Beta-fructofuranosidase 72.4 7.1 0.00024 33.7 6.1 32 60-91 458-490 (526)
10 1y4w_A EXO-inulinase; glycosid 72.1 8.2 0.00028 32.8 6.4 32 60-91 459-491 (518)
11 3sc7_X Inulinase; glycoside hy 69.1 10 0.00035 32.6 6.4 30 61-90 460-490 (516)
12 2y6h_A Xylanase, CBM4-2; hydro 68.2 1.7 6E-05 32.3 1.2 47 5-55 64-127 (167)
13 4b1m_A Levanase; hydrolase, CB 58.3 31 0.0011 25.0 6.5 20 61-80 135-154 (185)
14 1st8_A Fructan 1-exohydrolase 56.6 27 0.00092 30.0 6.7 30 60-89 470-500 (543)
15 3n6r_A Propionyl-COA carboxyla 52.6 97 0.0033 27.2 9.7 55 53-107 515-572 (681)
16 2chh_A Protein RSC3288; lectin 50.8 42 0.0014 24.0 5.9 43 67-112 25-73 (114)
17 2bv4_A Lectin CV-IIL; mannose; 50.3 44 0.0015 23.9 5.9 43 67-112 24-72 (113)
18 2wao_A Endoglucanase E; plant 50.1 29 0.001 27.0 5.5 58 9-70 35-95 (341)
19 3imm_A Putative secreted glyco 49.7 15 0.00052 27.5 3.6 21 61-81 124-144 (201)
20 2ac1_A Invertase; five fold be 47.2 50 0.0017 28.3 6.9 31 60-90 477-508 (541)
21 2h85_A Putative ORF1AB polypro 45.7 22 0.00075 29.9 4.2 42 35-83 295-343 (347)
22 3s5q_A Putative glycosylhydrol 44.5 20 0.00069 27.3 3.6 20 61-80 137-156 (214)
23 1uzv_A Pseudomonas aeruginosa 44.4 61 0.0021 23.2 5.9 43 67-112 24-73 (114)
24 3h3l_A Putative sugar hydrolas 44.4 20 0.00068 27.9 3.6 20 61-80 157-176 (241)
25 3u1x_A Putative glycosyl hydro 42.9 22 0.00074 27.3 3.6 20 61-80 164-183 (236)
26 2zzj_A Glucuronan lyase A; bet 42.0 86 0.003 24.8 7.0 51 48-98 135-198 (238)
27 3osd_A Putative glycosyl hydro 40.7 24 0.00082 27.8 3.6 20 61-80 183-202 (265)
28 3gm8_A Glycoside hydrolase fam 39.8 52 0.0018 29.7 6.1 81 31-112 637-749 (801)
29 3hbk_A Putative glycosyl hydro 36.5 24 0.00084 27.3 3.0 20 61-80 167-187 (245)
30 3zyp_A CIP1; metal binding pro 36.3 17 0.00059 27.0 2.0 26 50-80 135-160 (218)
31 2zxj_A Transcriptional regulat 35.4 17 0.00058 25.2 1.8 18 64-81 19-36 (120)
32 2qhs_A Lipoyltransferase; glob 35.3 42 0.0014 25.6 4.2 31 68-98 145-176 (237)
33 1jy4_A B4dimer; eight-stranded 35.3 20 0.00069 20.4 1.7 14 93-106 22-35 (35)
34 4azz_A Levanase; hydrolase; 1. 40.5 8.4 0.00029 27.2 0.0 20 61-80 114-133 (172)
35 2v73_A CBM40, putative EXO-alp 33.0 54 0.0019 25.0 4.4 39 64-102 112-155 (191)
36 2waa_A Acetyl esterase, xylan 31.4 92 0.0031 24.3 5.7 58 9-69 44-104 (347)
37 4axo_A EUTQ, ethanolamine util 30.4 1.5E+02 0.0052 21.3 7.9 51 57-109 82-135 (151)
38 3mcb_B Transcription factor BT 28.1 38 0.0013 21.3 2.3 17 80-96 7-23 (58)
39 1lya_A Cathepsin D; lysosomal 27.7 68 0.0023 20.9 3.7 23 56-78 20-44 (97)
40 2xr4_A Lectin; sugar binding p 27.6 1.4E+02 0.0049 21.3 5.6 42 67-111 25-74 (116)
41 3buu_A Uncharacterized LOLA su 27.4 1.7E+02 0.0059 21.0 8.0 22 76-97 183-207 (229)
42 2g7b_A Cellular retinoic acid- 27.3 1.1E+02 0.0038 21.4 5.0 30 74-103 99-131 (137)
43 3r8n_I 30S ribosomal protein S 26.5 45 0.0015 24.0 2.7 25 16-45 12-36 (127)
44 4a1y_A Myelin P2 protein; tran 26.5 1.7E+02 0.0057 20.5 6.1 28 76-103 100-127 (133)
45 3uv0_A Mutator 2, isoform B; F 26.4 74 0.0025 22.2 3.8 36 69-106 59-99 (102)
46 2c8m_A Lipoate-protein ligase 26.1 75 0.0026 24.2 4.2 29 69-97 135-164 (262)
47 1p9k_A ORF, hypothetical prote 25.9 43 0.0015 21.0 2.3 32 72-105 47-78 (79)
48 3lkx_A Transcription factor BT 25.7 46 0.0016 21.4 2.4 18 80-97 7-24 (66)
49 2vqe_I 30S ribosomal protein S 25.1 50 0.0017 23.8 2.8 25 16-45 13-37 (128)
50 3j20_K 30S ribosomal protein S 25.1 63 0.0022 23.4 3.4 25 16-45 13-37 (135)
51 2p0l_A Lipoate-protein ligase 24.0 86 0.0029 24.4 4.2 30 68-97 150-180 (288)
52 1igq_A Transcriptional repress 24.0 1E+02 0.0034 19.8 3.8 43 54-107 14-59 (62)
53 3flp_A SAP-like pentraxin; phy 23.8 1.6E+02 0.0054 21.7 5.5 25 58-82 96-124 (217)
54 3uep_A YSCQ-C, type III secret 23.6 60 0.0021 21.8 2.8 24 62-86 44-70 (96)
55 2p5i_A BH3822 protein; PFAM030 22.4 97 0.0033 24.0 4.2 30 68-97 151-181 (288)
56 1vqz_A Lipoate-protein ligase, 21.6 1E+02 0.0035 24.7 4.4 29 69-97 132-161 (341)
57 4b0m_A F1 capsule-anchoring pr 21.5 92 0.0032 21.8 3.6 18 70-87 33-51 (136)
58 3u5c_Q RP61R, 40S ribosomal pr 21.2 70 0.0024 23.4 2.9 25 16-45 16-40 (143)
59 2vve_A Spike protein P1; viral 20.7 28 0.00097 27.0 0.8 36 68-106 39-74 (254)
60 3fil_A Immunoglobulin G-bindin 20.6 30 0.001 21.8 0.7 12 31-42 2-13 (56)
61 1ifc_A Intestinal fatty acid b 20.0 2.2E+02 0.0077 19.6 5.7 28 76-103 99-126 (132)
No 1
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A
Probab=100.00 E-value=4e-44 Score=254.47 Aligned_cols=81 Identities=47% Similarity=0.923 Sum_probs=79.9
Q ss_pred eeeeeeeeEEeeCCeeEEEEEEccceeEEEcCEEeceeeeeeeCCeeEEEEeCCccEEEEEEeecCceeceEEEEEecCc
Q psy16754 46 QSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAVSSCNKKEGLLYSLISKLK 125 (127)
Q Consensus 46 ~~k~~~tW~~~i~g~~~RIvLdK~tmdvw~nG~~iet~geFvd~Gtet~F~lg~~~c~I~a~ssG~k~~Gi~H~L~vn~~ 125 (127)
|+|+++||+++++|++|||||||+||||||||++||++|||||+||+|||+++++||+|+|+|||+|++||+|+|||||+
T Consensus 8 ~~k~~~tW~~~~~G~~~RIvLeK~tmdVwvNG~~iet~geFvd~GTet~F~lg~~~c~I~a~sSG~k~~GIiH~L~Vng~ 87 (94)
T 2kd2_A 8 RSKTTSTWVLRLDGEDLRVVLEKDTMDVWCNGQKMETAGEFVDDGTETHFSVGNHDCYIKAVSSGKRKEGIIHTLIVDNR 87 (94)
T ss_dssp CCTTEEEEEEEETTEEEEEEEETTTTEEEESSSBCCCCCEECSSSEEEEEEETTEEEEEEEEEESSSSSEEEEEEEESSC
T ss_pred hhhheeEEEEEeCCCEEEEEEecCcEEEEECCEEeEEeeEEecCCcEEEEEeCCceEEEEEEecCCCcccEEEEEEECCe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q psy16754 126 T 126 (127)
Q Consensus 126 ~ 126 (127)
.
T Consensus 88 ~ 88 (94)
T 2kd2_A 88 E 88 (94)
T ss_dssp B
T ss_pred E
Confidence 4
No 2
>3mx7_A FAS apoptotic inhibitory molecule 1; beta sheet, apoptosis; 1.76A {Homo sapiens}
Probab=99.80 E-value=3.4e-20 Score=130.67 Aligned_cols=45 Identities=38% Similarity=0.806 Sum_probs=43.7
Q ss_pred CccccceeeEEe-CCcceEEEEEEccCCceEEEEEEECCeehHhhh
Q psy16754 1 MFRLVGEESFQL-DSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFS 45 (127)
Q Consensus 1 mFkLVGke~F~i-~~~~k~~I~I~a~~gf~YeYsL~V~GKsl~kf~ 45 (127)
||||||+|+|+| +++++|+|+|+|+++|+|+|+|+||||||++|+
T Consensus 45 mfklvGke~F~ig~~~~k~~I~I~a~~~~~y~YtL~VngKslk~f~ 90 (90)
T 3mx7_A 45 MFKLVGKETFYVGAAKTKATINIDAISGFAYEYTLEINGKSLKKYM 90 (90)
T ss_dssp CSCCCEEEEEEETTTTEEEEEEEEEETTTEEEEEEEETTEEEEECC
T ss_pred eEEEEeeEeEEECCcceEEEEEEEecCCccEEEEEEECCEeHHHcC
Confidence 899999999999 888999999999999999999999999999995
No 3
>3mx7_A FAS apoptotic inhibitory molecule 1; beta sheet, apoptosis; 1.76A {Homo sapiens}
Probab=98.26 E-value=8.4e-06 Score=57.16 Aligned_cols=73 Identities=27% Similarity=0.358 Sum_probs=60.5
Q ss_pred eeeeEEeeCCeeEEEEEEcccee----EEEcCEEe-ceeeeeeeCCeeEEEEeCC--ccEEEEEEee-cCceeceEEEEE
Q psy16754 50 NCTWIVTVEDETYRVVLERGTLD----IWVNGDRV-DVTGEFVENGTETHFTIGD--TPAYIKAVSS-CNKKEGLLYSLI 121 (127)
Q Consensus 50 ~~tW~~~i~g~~~RIvLdK~tmd----vw~nG~~i-et~geFvd~Gtet~F~lg~--~~c~I~a~ss-G~k~~Gi~H~L~ 121 (127)
--+|.+.+++.-++|-++-.|.. |+|||+.+ ...=-|---|.|+ |.+|+ ++|.|..... |. .-.|+|+
T Consensus 5 va~W~Vpl~~~~HkieFeHgtttGkrvi~VDGkev~r~~wmfklvGke~-F~ig~~~~k~~I~I~a~~~~---~y~YtL~ 80 (90)
T 3mx7_A 5 VAVWDVALSDGVHKIEFEHGTTSGKRVVYVDGKEEIRKEWMFKLVGKET-FYVGAAKTKATINIDAISGF---AYEYTLE 80 (90)
T ss_dssp EEEEEEEETTEEEEEEEEECTTTCCEEEEETTEEEEEECCCSCCCEEEE-EEETTTTEEEEEEEEEETTT---EEEEEEE
T ss_pred EEEEEecCCCCcEEEEEEeccccceEEEEECCEEEEecCCeEEEEeeEe-EEECCcceEEEEEEEecCCc---cEEEEEE
Confidence 34799999999999999977654 89999866 4444688888887 99999 9999998764 44 7899999
Q ss_pred ecCcC
Q psy16754 122 SKLKT 126 (127)
Q Consensus 122 vn~~~ 126 (127)
|||++
T Consensus 81 VngKs 85 (90)
T 3mx7_A 81 INGKS 85 (90)
T ss_dssp ETTEE
T ss_pred ECCEe
Confidence 99974
No 4
>4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A
Probab=81.55 E-value=3.1 Score=35.64 Aligned_cols=32 Identities=16% Similarity=0.359 Sum_probs=28.1
Q ss_pred eeEEEEEEccceeEEEcC-EEeceeeeeeeCCe
Q psy16754 60 ETYRVVLERGTLDIWVNG-DRVDVTGEFVENGT 91 (127)
Q Consensus 60 ~~~RIvLdK~tmdvw~nG-~~iet~geFvd~Gt 91 (127)
...||.+|+..+||++|+ +.+=|.+-|.+.+.
T Consensus 424 ~~L~I~vD~SsvEvFvndG~~v~T~rifp~~~~ 456 (492)
T 4ffh_A 424 VHLRILVDTQSVEVFVNAGHTVLSQQVHFAEGD 456 (492)
T ss_dssp EEEEEEEETTEEEEEETTTTEEEEEECCCCTTC
T ss_pred EEEEEEEeCCEEEEEECCCEEEEEEEEeCCCCC
Confidence 389999999999999995 88899999987654
No 5
>3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A*
Probab=80.15 E-value=4.7 Score=34.86 Aligned_cols=31 Identities=13% Similarity=0.339 Sum_probs=27.9
Q ss_pred eeEEEEEEccceeEEEc-CEEeceeeeeeeCC
Q psy16754 60 ETYRVVLERGTLDIWVN-GDRVDVTGEFVENG 90 (127)
Q Consensus 60 ~~~RIvLdK~tmdvw~n-G~~iet~geFvd~G 90 (127)
...||.+|+..+||++| |+.+=|.+-|.+.|
T Consensus 449 ~~L~i~vD~ssvEvF~ndG~~v~T~~iFP~~~ 480 (509)
T 3kf3_A 449 FSLYGIVDKNIIELYFNDGTVAMTNTFFMGEG 480 (509)
T ss_dssp EEEEEEEETTEEEEEETTTTEEEEEECCCSTT
T ss_pred EEEEEEEeccEEEEEECCCEEEEEEEEcCCCC
Confidence 48999999999999999 57888899999887
No 6
>3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A*
Probab=79.74 E-value=6.5 Score=35.03 Aligned_cols=56 Identities=20% Similarity=0.215 Sum_probs=38.9
Q ss_pred eeeeEEe------eCCeeEEEEEEccceeEEEcCEEeceeeeeee-CC-eeE-EEEeCCccEEEE
Q psy16754 50 NCTWIVT------VEDETYRVVLERGTLDIWVNGDRVDVTGEFVE-NG-TET-HFTIGDTPAYIK 105 (127)
Q Consensus 50 ~~tW~~~------i~g~~~RIvLdK~tmdvw~nG~~iet~geFvd-~G-tet-~F~lg~~~c~I~ 105 (127)
.+.|.+. .+-...||.+|+..+||++|++.+=|.+-|.+ .+ +.. -|.-|+-.+.|.
T Consensus 555 ~R~~~~~~~~~~~~e~l~LrIfVD~SSVEVFvNde~vmTsRIyP~~~~s~gI~l~a~G~G~a~~~ 619 (634)
T 3lig_A 555 LRLFDVIENGQEQVETLDLTVVVDNAVVEVYANGRFALSTWARSWYDNSTQIRFFHNGEGEVQFR 619 (634)
T ss_dssp CCCCEEESSSSEEECCEEEEEEEETTEEEEEETTTEEEEEECCCCCTTTTEEEEEEESSSCEEEE
T ss_pred eEEEeecCcccccCCceEEEEEEECCEEEEEECCcEEEEEEecCCCCCCCcEEEEECCCccEEEE
Confidence 4556553 23458999999999999999988899999987 33 333 334332456654
No 7
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A
Probab=75.97 E-value=4.1 Score=28.39 Aligned_cols=34 Identities=26% Similarity=0.499 Sum_probs=27.3
Q ss_pred eeEEe-CCcceEEEEEEccCCc--eEEEEEEECCeehHh
Q psy16754 8 ESFQL-DSKVPCLIKIEPSGPF--GYAYSITVDGKTLEK 43 (127)
Q Consensus 8 e~F~i-~~~~k~~I~I~a~~gf--~YeYsL~V~GKsl~k 43 (127)
-.|.+ + ++|.|.-...|.- .-.|+|.|||+....
T Consensus 55 t~F~lg~--~~c~I~a~sSG~k~~GIiH~L~Vng~~vp~ 91 (94)
T 2kd2_A 55 THFSVGN--HDCYIKAVSSGKRKEGIIHTLIVDNREIPE 91 (94)
T ss_dssp EEEEETT--EEEEEEEEEESSSSSEEEEEEEESSCBCCB
T ss_pred EEEEeCC--ceEEEEEEecCCCcccEEEEEEECCeECcc
Confidence 35788 7 8999999886544 599999999987654
No 8
>1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A*
Probab=74.97 E-value=6.2 Score=32.65 Aligned_cols=30 Identities=17% Similarity=0.129 Sum_probs=26.7
Q ss_pred eeEEEEEEccceeEEEc-CEEeceeeeeeeCC
Q psy16754 60 ETYRVVLERGTLDIWVN-GDRVDVTGEFVENG 90 (127)
Q Consensus 60 ~~~RIvLdK~tmdvw~n-G~~iet~geFvd~G 90 (127)
...||.+|...+||++| |+ .=|.+-|.+.+
T Consensus 379 ~~l~i~vD~s~vEvF~n~G~-~~t~r~yp~~~ 409 (432)
T 1w2t_A 379 NRIRAFLDSCSVEFFFNDSI-AFSFRIHPENV 409 (432)
T ss_dssp EEEEEEEETTEEEEEETTTE-EEEEECCCSSC
T ss_pred eEEEEEEcCCEEEEEECCCE-EEEEEEeCCCC
Confidence 47999999999999999 77 88899998765
No 9
>3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A*
Probab=72.38 E-value=7.1 Score=33.70 Aligned_cols=32 Identities=28% Similarity=0.617 Sum_probs=27.8
Q ss_pred eeEEEEEEccceeEEEcC-EEeceeeeeeeCCe
Q psy16754 60 ETYRVVLERGTLDIWVNG-DRVDVTGEFVENGT 91 (127)
Q Consensus 60 ~~~RIvLdK~tmdvw~nG-~~iet~geFvd~Gt 91 (127)
...||.+|...+||++|| +.+=|.+-|.+.+.
T Consensus 458 ~~LrI~vD~SsvEvF~n~G~~v~Tsrvyp~~~~ 490 (526)
T 3pij_A 458 LDLRVFVDRGSVEVYVNGGHQVLSSYSYASEGP 490 (526)
T ss_dssp EEEEEEECSSEEEEEETTTTEEEEEECCCCSSC
T ss_pred EEEEEEEeCCEEEEEECCCeEEEEEEEcCCCCC
Confidence 489999999999999995 88889999987654
No 10
>1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A*
Probab=72.14 E-value=8.2 Score=32.78 Aligned_cols=32 Identities=9% Similarity=0.310 Sum_probs=28.1
Q ss_pred eeEEEEEEccceeEEEc-CEEeceeeeeeeCCe
Q psy16754 60 ETYRVVLERGTLDIWVN-GDRVDVTGEFVENGT 91 (127)
Q Consensus 60 ~~~RIvLdK~tmdvw~n-G~~iet~geFvd~Gt 91 (127)
...||.+|...+||++| |+.+=|.+-|.+.+.
T Consensus 459 ~~lri~vD~SsvEvF~n~G~~~~T~rvyp~~~~ 491 (518)
T 1y4w_A 459 VKLSIFVDRSSVEVFGGQGETTLTAQIFPSSDA 491 (518)
T ss_dssp EEEEEEEETTEEEEEETTTTEEEEEECCCCTTC
T ss_pred EEEEEEEeCCEEEEEECCCEEEEEEEecCCCCC
Confidence 47999999999999999 688899999987653
No 11
>3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X*
Probab=69.11 E-value=10 Score=32.61 Aligned_cols=30 Identities=13% Similarity=0.262 Sum_probs=26.7
Q ss_pred eEEEEEEccceeEEEcC-EEeceeeeeeeCC
Q psy16754 61 TYRVVLERGTLDIWVNG-DRVDVTGEFVENG 90 (127)
Q Consensus 61 ~~RIvLdK~tmdvw~nG-~~iet~geFvd~G 90 (127)
..||.+|+..+||++|+ +.+=|.+-|.+.+
T Consensus 460 ~Lri~vD~SsvEvF~n~G~~v~Tsrvyp~~~ 490 (516)
T 3sc7_X 460 SIRVLVDTCSVEVFGGQGEAVISDLIFPSDS 490 (516)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEECCCCTT
T ss_pred EEEEEEeCcEEEEEECCCEEEEEEEecCCCC
Confidence 89999999999999985 7888899998765
No 12
>2y6h_A Xylanase, CBM4-2; hydrolase; 1.08A {Rhodothermus marinus} PDB: 2y64_A* 2y6g_A 2y6l_A* 2y6j_A* 2y6k_A* 3jxs_A 1k42_A 1k45_A
Probab=68.19 E-value=1.7 Score=32.30 Aligned_cols=47 Identities=21% Similarity=0.612 Sum_probs=35.0
Q ss_pred cceeeEEe-CCcceEEEEEEccCCceEEEEE-------------EECCeehHhhh---eeeeeeeeEE
Q psy16754 5 VGEESFQL-DSKVPCLIKIEPSGPFGYAYSI-------------TVDGKTLEKFS---QSKANCTWIV 55 (127)
Q Consensus 5 VGke~F~i-~~~~k~~I~I~a~~gf~YeYsL-------------~V~GKsl~kf~---~~k~~~tW~~ 55 (127)
+|..+|.| . +..-++++| |-.|.|++ .|..+|+.+|- +.+.+.-|.+
T Consensus 64 ~gnnp~~i~a--ta~pvnv~p--gvtytyti~araeqdgavvsftvgnqs~~eygrlh~qqittewqp 127 (167)
T 2y6h_A 64 VGNNPFNIQA--TALPVNVRP--GVTYTYTIRARAEQDGAVVSFTVGNQSFDEYGRLHHQQITTEWQP 127 (167)
T ss_dssp CCSSGGGEEE--EEEEEECCT--TCEEEEEEEEEESSSCEEEEEEEECTTSCEEEEEEEEEECSSCEE
T ss_pred CCCCCcceee--eeeeeeccC--CceEEEEEEEeeccCCcEEEEEecCccHHHhhhhhhhheeecccc
Confidence 67788888 6 667788877 78999976 47788999998 4455555654
No 13
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=58.32 E-value=31 Score=25.01 Aligned_cols=20 Identities=15% Similarity=0.292 Sum_probs=18.2
Q ss_pred eEEEEEEccceeEEEcCEEe
Q psy16754 61 TYRVVLERGTLDIWVNGDRV 80 (127)
Q Consensus 61 ~~RIvLdK~tmdvw~nG~~i 80 (127)
..||+.+-..+.+|+||+++
T Consensus 135 ~l~I~~~G~~i~~~vnG~~v 154 (185)
T 4b1m_A 135 HLKTEAEGDRFKIYLDDRLV 154 (185)
T ss_dssp EEEEEEETTEEEEEETTEEE
T ss_pred EEEEEEECCEEEEEECCEEE
Confidence 67899999999999999876
No 14
>1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A*
Probab=56.64 E-value=27 Score=30.01 Aligned_cols=30 Identities=7% Similarity=0.169 Sum_probs=26.9
Q ss_pred eeEEEEEEccceeEEEc-CEEeceeeeeeeC
Q psy16754 60 ETYRVVLERGTLDIWVN-GDRVDVTGEFVEN 89 (127)
Q Consensus 60 ~~~RIvLdK~tmdvw~n-G~~iet~geFvd~ 89 (127)
...||.+|...+||++| |+.+=|.+-|.+.
T Consensus 470 ~~LrI~vD~SsvEvF~n~G~~~~TsRvyp~~ 500 (543)
T 1st8_A 470 ISLRNLIDHSIIESFGAGGKTCITSRIYPKF 500 (543)
T ss_dssp EEEEEEEETTEEEEEEGGGTEEEEEECCCSG
T ss_pred EEEEEEEeCCEEEEEECCCEEEEEEEeecCC
Confidence 48999999999999996 7888999999876
No 15
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=52.56 E-value=97 Score=27.22 Aligned_cols=55 Identities=16% Similarity=0.425 Sum_probs=22.6
Q ss_pred eEEeeCCeeEEEEEE--ccceeEEE-cCEEeceeeeeeeCCeeEEEEeCCccEEEEEE
Q psy16754 53 WIVTVEDETYRVVLE--RGTLDIWV-NGDRVDVTGEFVENGTETHFTIGDTPAYIKAV 107 (127)
Q Consensus 53 W~~~i~g~~~RIvLd--K~tmdvw~-nG~~iet~geFvd~Gtet~F~lg~~~c~I~a~ 107 (127)
|.+.++|+.+.|.+. .+...+-+ ||..++...+..+++..-...+++....+...
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~ 572 (681)
T 3n6r_A 515 WVVTLQGADFPVTIAADHDGSTVSFDDGSSMRVTSDWTPGDQLANLMVDGAPLVLKVG 572 (681)
T ss_dssp EEEECSSCEEEEEEEECSSCEEEEETTSCEEEEEECCCTTCSEEEEEETTEEEEEEEE
T ss_pred EEEEECCEEEEEEEEEcCCeEEEEEeCCcEEEEEEEecCCCeEEEEEECCEEEEEEEE
Confidence 444444444444332 22333444 44444433333333333334455544444443
No 16
>2chh_A Protein RSC3288; lectin, sugar-binding protein, D-mannose, plant pathogen, hypothetical protein; HET: MAN BMA; 1.0A {Ralstonia solanacearum} SCOP: b.115.1.1 PDB: 1uqx_A*
Probab=50.85 E-value=42 Score=24.02 Aligned_cols=43 Identities=16% Similarity=0.224 Sum_probs=24.8
Q ss_pred EccceeEEEcCEEeceeeeeeeCCe------eEEEEeCCccEEEEEEeecCc
Q psy16754 67 ERGTLDIWVNGDRVDVTGEFVENGT------ETHFTIGDTPAYIKAVSSCNK 112 (127)
Q Consensus 67 dK~tmdvw~nG~~iet~geFvd~Gt------et~F~lg~~~c~I~a~ssG~k 112 (127)
+.+|.+||+|.+..+| |+-.|| .+...-|.-..||+....|+.
T Consensus 25 ~~QtikvyIdd~~~aT---~tg~gt~d~~~gt~~l~Sg~GkVriev~~nGKp 73 (114)
T 2chh_A 25 NTQTIQVLVDNVVKAT---FTGSGTSDKLLGSQVLNSGSGAIKIQVSVNGKP 73 (114)
T ss_dssp EEEEEEEEETTEEEEE---EEEEEEEEEEEEEEEEECTTSEEEEEEEETTEE
T ss_pred CceeEEEEECCeecce---eeccCcCCCccceEEEecCCCeEEEEEEeCCcc
Confidence 4678999999965543 555555 222333555556655444443
No 17
>2bv4_A Lectin CV-IIL; mannose; HET: MMA; 1.0A {Chromobacterium violaceum} PDB: 2boi_A*
Probab=50.31 E-value=44 Score=23.91 Aligned_cols=43 Identities=14% Similarity=0.273 Sum_probs=24.8
Q ss_pred EccceeEEEcCEEeceeeeeeeCCe------eEEEEeCCccEEEEEEeecCc
Q psy16754 67 ERGTLDIWVNGDRVDVTGEFVENGT------ETHFTIGDTPAYIKAVSSCNK 112 (127)
Q Consensus 67 dK~tmdvw~nG~~iet~geFvd~Gt------et~F~lg~~~c~I~a~ssG~k 112 (127)
+.+|.+||+|.+..+| |+-.|| .+...-|.-..||+....|+.
T Consensus 24 ~~QtikvyIdd~~~aT---~tg~gt~d~~~~t~~l~Sg~GkVriev~~nGKp 72 (113)
T 2bv4_A 24 ATQHVEIFVDNEPRAA---FSGVGTGDNNLGTKVINSGSGNVRVQITANGRQ 72 (113)
T ss_dssp EEEEEEEEETTEEEEE---EEEEEEEEEEEEEEEEECTTSEEEEEEEETTEE
T ss_pred CceeEEEEECCeecce---eeccCcCCCccceEEEecCCCeEEEEEEeCCcc
Confidence 5678999999965543 555555 222333555556655444443
No 18
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=50.11 E-value=29 Score=26.99 Aligned_cols=58 Identities=19% Similarity=0.296 Sum_probs=35.1
Q ss_pred eEEe-CCcceEEEEEEccCCceEEEEEEECCeehHhhh-eeeeeeeeEE-eeCCeeEEEEEEccc
Q psy16754 9 SFQL-DSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFS-QSKANCTWIV-TVEDETYRVVLERGT 70 (127)
Q Consensus 9 ~F~i-~~~~k~~I~I~a~~gf~YeYsL~V~GKsl~kf~-~~k~~~tW~~-~i~g~~~RIvLdK~t 70 (127)
.|.+ + +.+.|.+... +.. -|.+.|||+...... .........+ .+...+++|.|-|-+
T Consensus 35 ~~~~~g--~~~~~~~~~~-~~~-~~~v~vdg~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~ 95 (341)
T 2wao_A 35 ELNFYG--TEASVTIKSG-GEN-WFQAIVDGNPLPPFSVNATTSTVKLVSGLAEGAHHLVLWKRT 95 (341)
T ss_dssp EEEEEE--SCEEEEEEEE-EEE-EEEEEETTEECCCEEEEEEEEEEEEECSCCSEEEEEEEEECS
T ss_pred EEEEEc--CEEEEEEecC-CCc-EEEEEECCeEEEEEEEcCCCceEEeccCCCCCcEEEEEEEec
Confidence 4666 6 5677776442 333 488999999987766 3322222222 355667777777765
No 19
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=49.74 E-value=15 Score=27.54 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=19.3
Q ss_pred eEEEEEEccceeEEEcCEEec
Q psy16754 61 TYRVVLERGTLDIWVNGDRVD 81 (127)
Q Consensus 61 ~~RIvLdK~tmdvw~nG~~ie 81 (127)
.++|+..-+.+.+|+||.+|-
T Consensus 124 ~~~I~~~g~~i~v~lNG~~V~ 144 (201)
T 3imm_A 124 HMRIKCAGQHIMVILNGKKVT 144 (201)
T ss_dssp EEEEEEETTEEEEEETTEEEE
T ss_pred EEEEEEECCEEEEEECCEEEE
Confidence 789999999999999999983
No 20
>2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A*
Probab=47.17 E-value=50 Score=28.28 Aligned_cols=31 Identities=6% Similarity=0.192 Sum_probs=27.2
Q ss_pred eeEEEEEEccceeEEEc-CEEeceeeeeeeCC
Q psy16754 60 ETYRVVLERGTLDIWVN-GDRVDVTGEFVENG 90 (127)
Q Consensus 60 ~~~RIvLdK~tmdvw~n-G~~iet~geFvd~G 90 (127)
...||.+|...+||++| |+..=|.+-|.+..
T Consensus 477 ~~Lri~vD~S~vEvF~n~G~~~~Tsrvyp~~~ 508 (541)
T 2ac1_A 477 LSLRALIDHSVVESFGGKGRACITSRVYPKLA 508 (541)
T ss_dssp EEEEEEEETTEEEEEETTTTEEEEEECCCSSS
T ss_pred eEEEEEEeCCEEEEEECCCEEEEEEEeeCCCc
Confidence 48999999999999996 78889999998763
No 21
>2h85_A Putative ORF1AB polyprotein; endoribonuclease, RNA, NSP, viral protein; 2.60A {Sars coronavirus} SCOP: c.66.1.48 d.294.1.2 PDB: 2ozk_A 2rhb_A
Probab=45.67 E-value=22 Score=29.89 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=32.2
Q ss_pred EECCeehHhhh-------eeeeeeeeEEeeCCeeEEEEEEccceeEEEcCEEecee
Q psy16754 35 TVDGKTLEKFS-------QSKANCTWIVTVEDETYRVVLERGTLDIWVNGDRVDVT 83 (127)
Q Consensus 35 ~V~GKsl~kf~-------~~k~~~tW~~~i~g~~~RIvLdK~tmdvw~nG~~iet~ 83 (127)
.|=.--|.+|. .+-..+.|.+++|-+++|.+| ||++++|.|.
T Consensus 295 Tv~DllLDDfv~ilKsl~~svvSKV~~V~ID~k~~rfML-------WckD~~v~TF 343 (347)
T 2h85_A 295 SVIDLLLGDFVEIIKSQDLSVISKVVKVTIDYAEISFML-------WCKDGHVETF 343 (347)
T ss_dssp EEBCCCHHHHHHHHHTSCCSSSEEEEEEEETTEEEEEEE-------EEETTEEEEE
T ss_pred EEEEEehHHHHHHHHhcCccceeEEEEEEccceeEEEEE-------EeCCCceeee
Confidence 34445677887 345678999999999999764 9999888763
No 22
>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis}
Probab=44.48 E-value=20 Score=27.26 Aligned_cols=20 Identities=20% Similarity=0.366 Sum_probs=19.0
Q ss_pred eEEEEEEccceeEEEcCEEe
Q psy16754 61 TYRVVLERGTLDIWVNGDRV 80 (127)
Q Consensus 61 ~~RIvLdK~tmdvw~nG~~i 80 (127)
.++|+..-+.+.+|+||.+|
T Consensus 137 ~~~I~~~g~~i~v~lNG~~V 156 (214)
T 3s5q_A 137 RMIITAKGQQIDIELNGKHI 156 (214)
T ss_dssp EEEEEEETTEEEEEETTEEE
T ss_pred EEEEEEECCEEEEEECCEEE
Confidence 78999999999999999998
No 23
>1uzv_A Pseudomonas aeruginosa lectin II; fucose, calcium; HET: FUC; 1.0A {Pseudomonas aeruginosa} SCOP: b.115.1.1 PDB: 1our_A 1oux_A 1ovp_A* 1ovs_A* 1oxc_A* 1ous_A* 2boj_A* 2bp6_A* 2vuc_A* 2vud_A* 3dcq_A* 1w8f_A* 1gzt_A* 1w8h_A* 2jdh_A* 2jdk_A* 2jdp_A* 2jdn_A* 2jdm_A* 2jdu_A* ...
Probab=44.43 E-value=61 Score=23.17 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=24.1
Q ss_pred EccceeEEEcCEEeceeeeeeeCCee----EEEEe--CC-ccEEEEEEeecCc
Q psy16754 67 ERGTLDIWVNGDRVDVTGEFVENGTE----THFTI--GD-TPAYIKAVSSCNK 112 (127)
Q Consensus 67 dK~tmdvw~nG~~iet~geFvd~Gte----t~F~l--g~-~~c~I~a~ssG~k 112 (127)
+.+|.+||+|.+..+| |+-.||- -...+ |. -..||+....|+.
T Consensus 24 ~~Qti~vyIdd~~~aT---~~g~gt~d~~~gt~~l~Sg~~GkVriev~~nGKp 73 (114)
T 1uzv_A 24 GTQTVNVLVNNETAAT---FSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRP 73 (114)
T ss_dssp EEEEEEEEETTEEEEE---EEEEEEEEEEEEEEEEECTTTCEEEEEEEETTEE
T ss_pred CceeEEEEECCeecce---eeccCCCCCccceEEEecCCCceEEEEEEeCCcc
Confidence 5678999999965543 5555552 13344 33 4555555444443
No 24
>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503}
Probab=44.42 E-value=20 Score=27.90 Aligned_cols=20 Identities=15% Similarity=0.267 Sum_probs=18.8
Q ss_pred eEEEEEEccceeEEEcCEEe
Q psy16754 61 TYRVVLERGTLDIWVNGDRV 80 (127)
Q Consensus 61 ~~RIvLdK~tmdvw~nG~~i 80 (127)
.++|++.-..+.+|+||.+|
T Consensus 157 t~~I~v~g~~v~v~lNG~~V 176 (241)
T 3h3l_A 157 KTRIVVYNQRVIHYMNDVKI 176 (241)
T ss_dssp EEEEEEETTEEEEEETTEEE
T ss_pred EEEEEEECCEEEEEECCEEE
Confidence 78999999999999999988
No 25
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=42.95 E-value=22 Score=27.33 Aligned_cols=20 Identities=25% Similarity=0.743 Sum_probs=18.9
Q ss_pred eEEEEEEccceeEEEcCEEe
Q psy16754 61 TYRVVLERGTLDIWVNGDRV 80 (127)
Q Consensus 61 ~~RIvLdK~tmdvw~nG~~i 80 (127)
.++|+..-..+.+|+||.+|
T Consensus 164 ~~~I~~~g~~i~v~lNG~~V 183 (236)
T 3u1x_A 164 SSMVLYKDGYVEHWLNGEKL 183 (236)
T ss_dssp EEEEEEETTEEEEEETTEEE
T ss_pred EEEEEEECCEEEEEECCEEE
Confidence 88999999999999999988
No 26
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=41.98 E-value=86 Score=24.78 Aligned_cols=51 Identities=27% Similarity=0.477 Sum_probs=32.7
Q ss_pred eeeeee--EEe-eCCeeEEEEEEc-------cceeEEEcCEEe-ceeee--eeeCCeeEEEEeC
Q psy16754 48 KANCTW--IVT-VEDETYRVVLER-------GTLDIWVNGDRV-DVTGE--FVENGTETHFTIG 98 (127)
Q Consensus 48 k~~~tW--~~~-i~g~~~RIvLdK-------~tmdvw~nG~~i-et~ge--Fvd~Gtet~F~lg 98 (127)
++..+| +.. ..|+=++|||.- .-++||.||+++ +..+- +.|+..--.|.+|
T Consensus 135 ~~~~~~~~l~~v~~G~Wh~iVihvkWs~d~~Gf~~vW~dG~~v~~~~g~~t~~~d~~~~~fk~G 198 (238)
T 2zzj_A 135 RNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAKVHEEYNVATTVDDDSVFQFRVG 198 (238)
T ss_dssp EEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTEEEEEEEEECCSBSSCCEEEEEEE
T ss_pred ccceeccccccccCCceEEEEEEEEEeCCCCcEEEEEECCEEEEeecCcceeccCCccceeEEE
Confidence 445567 433 489999999963 368899999988 55542 4444443335554
No 27
>3osd_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.80A {Bacteroides thetaiotaomicron} PDB: 3nmb_A 4hxc_A*
Probab=40.71 E-value=24 Score=27.84 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=18.9
Q ss_pred eEEEEEEccceeEEEcCEEe
Q psy16754 61 TYRVVLERGTLDIWVNGDRV 80 (127)
Q Consensus 61 ~~RIvLdK~tmdvw~nG~~i 80 (127)
.++|++.-..+.+|+||++|
T Consensus 183 t~~I~v~g~~v~v~lNG~~V 202 (265)
T 3osd_A 183 KAKIMVYKGTVVHGQNDENV 202 (265)
T ss_dssp EEEEEEETTEEEEEETTEEE
T ss_pred EEEEEEECCEEEEEECCEEE
Confidence 78999999999999999998
No 28
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=39.83 E-value=52 Score=29.73 Aligned_cols=81 Identities=17% Similarity=0.261 Sum_probs=45.5
Q ss_pred EEEEEECCeehHhhheeeeeeeeEE-----------------------eeCCeeEEEEEEccceeEEEcCE--------E
Q psy16754 31 AYSITVDGKTLEKFSQSKANCTWIV-----------------------TVEDETYRVVLERGTLDIWVNGD--------R 79 (127)
Q Consensus 31 eYsL~V~GKsl~kf~~~k~~~tW~~-----------------------~i~g~~~RIvLdK~tmdvw~nG~--------~ 79 (127)
+=.|.|||||+-+-+.....-+|.+ .-.|...+|.|..+.-.+-+||+ .
T Consensus 637 ~VeLflNGks~G~~~~~~~~~~w~v~y~~G~l~av~~~~Gk~v~~~~~~tag~~~~l~l~~d~~~l~adg~Dl~~v~v~v 716 (801)
T 3gm8_A 637 AVELFINNVSLGSKPYTGEQLIWLVPYSPGKIEARGIKKGKIVATDCYQSAEAPHSVALASNKYSVKAGSDEVIRIEIDI 716 (801)
T ss_dssp EEEEEETTEEEEEEECSSSCEEEEEEBCSSEEEEEEEETTEEEEEEEEECCCSEEEEEEEESCSBCCTTSCCCEEEEEEE
T ss_pred EEEEEECCEEeeEEecccceEEEEEEecceEEEEEEEeCCEEEEEEEEecCCCCeEEEEEEccccccCCCceEEEEEEEE
Confidence 4468999999854321111223433 33455667777766555556664 3
Q ss_pred eceeeeeeeCCe-eEEEEeCCccEEEEEEeecCc
Q psy16754 80 VDVTGEFVENGT-ETHFTIGDTPAYIKAVSSCNK 112 (127)
Q Consensus 80 iet~geFvd~Gt-et~F~lg~~~c~I~a~ssG~k 112 (127)
+|..|.-+-+-. ..+|++. -++.|.+..+|+.
T Consensus 717 ~D~~G~~~p~a~~~v~f~v~-G~g~l~g~~ng~~ 749 (801)
T 3gm8_A 717 TDKNGIPCPYASNELSFHVS-GPLRLLGVDNGNP 749 (801)
T ss_dssp EETTSCBCTTCCCEEEEEEE-SSEEEEEEECCCT
T ss_pred EeCCCCCcCCCCCeEEEEEe-cCEEEEeccCCCc
Confidence 355555543333 3578884 3567777766653
No 29
>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503}
Probab=36.45 E-value=24 Score=27.34 Aligned_cols=20 Identities=30% Similarity=0.561 Sum_probs=18.5
Q ss_pred eEEEEE-EccceeEEEcCEEe
Q psy16754 61 TYRVVL-ERGTLDIWVNGDRV 80 (127)
Q Consensus 61 ~~RIvL-dK~tmdvw~nG~~i 80 (127)
.+||+. .-..+.+|+||.+|
T Consensus 167 t~~I~~~~g~~v~v~lNG~~V 187 (245)
T 3hbk_A 167 TAVVKVFPNNHVEHWLNGVKV 187 (245)
T ss_dssp EEEEEECTTCEEEEEETTEEE
T ss_pred EEEEEEEcCCEEEEEECCEEE
Confidence 789999 78999999999988
No 30
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=36.27 E-value=17 Score=26.96 Aligned_cols=26 Identities=23% Similarity=0.624 Sum_probs=18.8
Q ss_pred eeeeEEeeCCeeEEEEEEccceeEEEcCEEe
Q psy16754 50 NCTWIVTVEDETYRVVLERGTLDIWVNGDRV 80 (127)
Q Consensus 50 ~~tW~~~i~g~~~RIvLdK~tmdvw~nG~~i 80 (127)
..+|.+. ++++-.+ .++++|+||+++
T Consensus 135 ~g~W~cv----E~~~~~~-G~~~~W~DG~~v 160 (218)
T 3zyp_A 135 TGAFQCF----EYHLGTD-GTIETWLNGSLI 160 (218)
T ss_dssp CSSCEEE----EEEECSS-SCEEEEETTEEC
T ss_pred CCcEEEE----EEEECCC-CeEEEEECCEEe
Confidence 3456665 5665444 689999999998
No 31
>2zxj_A Transcriptional regulatory protein WALR; two-component system, YYCG, response regulator, helix-turn-H motif, DNA-binding domain; 1.87A {Staphylococcus aureus} PDB: 2d1v_A
Probab=35.36 E-value=17 Score=25.15 Aligned_cols=18 Identities=17% Similarity=0.387 Sum_probs=16.3
Q ss_pred EEEEccceeEEEcCEEec
Q psy16754 64 VVLERGTLDIWVNGDRVD 81 (127)
Q Consensus 64 IvLdK~tmdvw~nG~~ie 81 (127)
++||.++..|++||+.|+
T Consensus 19 l~ld~~~~~v~~~g~~i~ 36 (120)
T 2zxj_A 19 IVIYPDAYSIKKRGEDIE 36 (120)
T ss_dssp EEEEGGGTEEEETTEEEC
T ss_pred EEEECCCCEEEECCEEEE
Confidence 688999999999999984
No 32
>2qhs_A Lipoyltransferase; globular protein; HET: OCA; 1.50A {Thermus thermophilus} PDB: 2qht_A 2qhu_A 2qhv_A
Probab=35.33 E-value=42 Score=25.59 Aligned_cols=31 Identities=26% Similarity=0.543 Sum_probs=24.6
Q ss_pred ccceeEEEcCEEeceeeeeeeCCeeE-EEEeC
Q psy16754 68 RGTLDIWVNGDRVDVTGEFVENGTET-HFTIG 98 (127)
Q Consensus 68 K~tmdvw~nG~~iet~geFvd~Gtet-~F~lg 98 (127)
...-+||++|+||-..+..+-.|... ||+|.
T Consensus 145 ~g~~dv~v~grKIag~g~~~~~~~~~hg~aLn 176 (237)
T 2qhs_A 145 PGYAGVWVGEDKLCAIGVAVKEGVSFHGFALN 176 (237)
T ss_dssp SSSSSEEETTEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCCEEECCcEEEEEeEEeeCCeEEEeEEEe
Confidence 45679999999998888888888774 57763
No 33
>1jy4_A B4dimer; eight-stranded beta-sheet, disulfide bond, de novo protein design; HET: DPR; NMR {Synthetic} SCOP: k.35.1.1 PDB: 1jy6_A*
Probab=35.26 E-value=20 Score=20.40 Aligned_cols=14 Identities=29% Similarity=0.249 Sum_probs=11.3
Q ss_pred EEEEeCCccEEEEE
Q psy16754 93 THFTIGDTPAYIKA 106 (127)
Q Consensus 93 t~F~lg~~~c~I~a 106 (127)
-||.+-+..|.|.|
T Consensus 22 whfvlpgykceila 35 (35)
T 1jy4_A 22 WHFVLPGYKCEILA 35 (35)
T ss_dssp EEEEETTEEEEEEC
T ss_pred eEEecCCceeEecC
Confidence 38888899998864
No 34
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=40.51 E-value=8.4 Score=27.23 Aligned_cols=20 Identities=15% Similarity=0.292 Sum_probs=17.9
Q ss_pred eEEEEEEccceeEEEcCEEe
Q psy16754 61 TYRVVLERGTLDIWVNGDRV 80 (127)
Q Consensus 61 ~~RIvLdK~tmdvw~nG~~i 80 (127)
..||+.+-..+.+|+||+++
T Consensus 114 ~l~I~~~G~~i~~~vnG~~v 133 (172)
T 4azz_A 114 HLKTEAEGDRFKIYLDDRLV 133 (172)
Confidence 78899999999999999766
No 35
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=33.04 E-value=54 Score=25.03 Aligned_cols=39 Identities=23% Similarity=0.253 Sum_probs=26.4
Q ss_pred EEEEc-cceeEEEcCEEecee----eeeeeCCeeEEEEeCCccE
Q psy16754 64 VVLER-GTLDIWVNGDRVDVT----GEFVENGTETHFTIGDTPA 102 (127)
Q Consensus 64 IvLdK-~tmdvw~nG~~iet~----geFvd~Gtet~F~lg~~~c 102 (127)
+++|+ ..+.||+||+++.+. ..|..+=-..++.+|+.+-
T Consensus 112 f~~d~~~~~~ly~NG~~V~t~~~~~~~fi~~i~ln~~~IG~~~r 155 (191)
T 2v73_A 112 LKIEKGIGAKIFLNGSLVKTVSDPNIKFLNAINLNSGFIGKTDR 155 (191)
T ss_dssp EEEETTTEEEEEETTEEEEEEECTTCCCGGGSCCCEEEESSCCC
T ss_pred EEEcCCccEEEEECCEEEEEEecccccceeecCCceEEEcceee
Confidence 44576 489999999999555 2333333556888987654
No 36
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=31.37 E-value=92 Score=24.32 Aligned_cols=58 Identities=9% Similarity=0.051 Sum_probs=32.7
Q ss_pred eEEe-CCcceEEEEEEccCCceEEEEEEECCeehHhhh-eeeeeeeeEE-eeCCeeEEEEEEcc
Q psy16754 9 SFQL-DSKVPCLIKIEPSGPFGYAYSITVDGKTLEKFS-QSKANCTWIV-TVEDETYRVVLERG 69 (127)
Q Consensus 9 ~F~i-~~~~k~~I~I~a~~gf~YeYsL~V~GKsl~kf~-~~k~~~tW~~-~i~g~~~RIvLdK~ 69 (127)
.|.+ + +.+.|.+....+ .=-|.+.|||+...... .......+.+ .+...+++|.|-|-
T Consensus 44 ~~~~~g--t~~~~~~~~~~~-~~~~~v~vdg~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~ 104 (347)
T 2waa_A 44 STIVAG--SRLTAEMQSSNG-NSWIDVIIDNHPPTSIKLDAQQQTVELFHFPNSGEHRVEIIHR 104 (347)
T ss_dssp EEEEEE--EEEEEEEEESSS-CEEEEEEETTSCCEEEEECSSCEEEEEEEEEEEEEEEEEEEEC
T ss_pred EEEEEc--CEEEEEEEeCCC-ceEEEEEECCceeeEEEEcCCCceEEeecCCCCCcEEEEEEEe
Confidence 4666 6 567777764223 34478889999876554 2222223332 34445566666665
No 37
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=30.38 E-value=1.5e+02 Score=21.28 Aligned_cols=51 Identities=29% Similarity=0.556 Sum_probs=38.3
Q ss_pred eCCeeEEEEEEccceeEEEcCEEe-ceeee--eeeCCeeEEEEeCCccEEEEEEee
Q psy16754 57 VEDETYRVVLERGTLDIWVNGDRV-DVTGE--FVENGTETHFTIGDTPAYIKAVSS 109 (127)
Q Consensus 57 i~g~~~RIvLdK~tmdvw~nG~~i-et~ge--Fvd~Gtet~F~lg~~~c~I~a~ss 109 (127)
.++.++-+||+ ..++++++|+.+ =.+|+ |...|+...|... .+|++....+
T Consensus 82 ~~~eE~~yVLe-G~~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~-~~a~~l~V~~ 135 (151)
T 4axo_A 82 LNYDEIDYVID-GTLDIIIDGRKVSASSGELIFIPKGSKIQFSVP-DYARFIYVTY 135 (151)
T ss_dssp CSSEEEEEEEE-EEEEEEETTEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEE
T ss_pred CCCcEEEEEEE-eEEEEEECCEEEEEcCCCEEEECCCCEEEEEeC-CCEEEEEEEC
Confidence 46789999998 669999999877 33344 8888998878775 6777776543
No 38
>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}
Probab=28.10 E-value=38 Score=21.30 Aligned_cols=17 Identities=29% Similarity=0.608 Sum_probs=14.4
Q ss_pred eceeeeeeeCCeeEEEE
Q psy16754 80 VDVTGEFVENGTETHFT 96 (127)
Q Consensus 80 iet~geFvd~Gtet~F~ 96 (127)
|+...=|.|||+..||.
T Consensus 7 IeEVnmfk~dg~vihF~ 23 (58)
T 3mcb_B 7 IEEVNMFTNQGTVIHFN 23 (58)
T ss_dssp CCEEEEEETTSEEEEEE
T ss_pred eeEEEEEecCCEEEEec
Confidence 56677799999999995
No 39
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=27.71 E-value=68 Score=20.95 Aligned_cols=23 Identities=22% Similarity=0.612 Sum_probs=19.6
Q ss_pred eeC--CeeEEEEEEccceeEEEcCE
Q psy16754 56 TVE--DETYRVVLERGTLDIWVNGD 78 (127)
Q Consensus 56 ~i~--g~~~RIvLdK~tmdvw~nG~ 78 (127)
.|+ .+.+.++||...-++||...
T Consensus 20 ~iGTP~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 20 GIGTPPQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EETTTTEEEEEEEETTCCCEEEEBT
T ss_pred EECCCCeEEEEEEeCCCCceEEeEc
Confidence 355 78999999999999999764
No 40
>2xr4_A Lectin; sugar binding protein, LUNG, pathogen; 1.90A {Burkholderia cenocepacia}
Probab=27.63 E-value=1.4e+02 Score=21.28 Aligned_cols=42 Identities=14% Similarity=0.320 Sum_probs=23.1
Q ss_pred EccceeEEEcC--EEeceeeeeeeCCe------eEEEEeCCccEEEEEEeecC
Q psy16754 67 ERGTLDIWVNG--DRVDVTGEFVENGT------ETHFTIGDTPAYIKAVSSCN 111 (127)
Q Consensus 67 dK~tmdvw~nG--~~iet~geFvd~Gt------et~F~lg~~~c~I~a~ssG~ 111 (127)
+.+|.+||+|. +..+ .|+-.|| .+...-|.-..||+....|+
T Consensus 25 ~~QtikvyIdd~~~~~a---T~~g~gt~d~~~~t~~lnSg~GkVriev~~nGk 74 (116)
T 2xr4_A 25 NDQTIDIYIDDDPKPAA---TFKGAGAQDQNLGTKVLDSGNGRVRVIVMANGR 74 (116)
T ss_dssp SCCEEEEEETTCSSCSE---EECCCSSTTEEEEEEEEECTTSEEEEEEEETTE
T ss_pred CceeEEEEeCCCCccce---eeeccCcCCCccceEEEecCCCeEEEEEEeCCc
Confidence 46788889888 3333 3555565 22333355555555544444
No 41
>3buu_A Uncharacterized LOLA superfamily protein NE2245; PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.20A {Nitrosomonas europaea atcc 19718}
Probab=27.38 E-value=1.7e+02 Score=20.96 Aligned_cols=22 Identities=9% Similarity=0.051 Sum_probs=11.9
Q ss_pred cCEEeceeeeeee---CCeeEEEEe
Q psy16754 76 NGDRVDVTGEFVE---NGTETHFTI 97 (127)
Q Consensus 76 nG~~iet~geFvd---~Gtet~F~l 97 (127)
+|..+.+..+..| .|..|.+.+
T Consensus 183 ~g~~~~~~~~~~d~~~~g~~t~~~~ 207 (229)
T 3buu_A 183 LGEMRPTRIIMEDALKSGEVSVLDY 207 (229)
T ss_dssp TTEEEEEEEEEEESSSSCCEEEEEE
T ss_pred CCEEEeEEEEEEeCcCCCCEEEEEE
Confidence 4555555556666 555554444
No 42
>2g7b_A Cellular retinoic acid-binding protein 2; crabpii, retinoids, beta barrel, crystallography, X-RAY, high resolution, schiff base; HET: AZE; 1.18A {Homo sapiens} PDB: 3d97_A* 3fa8_A 3i17_B 3fa7_A* 3fa9_A 3d95_A 3cwk_A 3f8a_A* 3fep_A* 3fek_B 3fa6_A 1bm5_A 1xca_A 3fel_A* 3f9d_A* 3cr6_A* 3fen_A 1blr_A 1cbq_A* 1cbs_A* ...
Probab=27.32 E-value=1.1e+02 Score=21.36 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=19.6
Q ss_pred EEcCE--EeceeeeeeeCCee-EEEEeCCccEE
Q psy16754 74 WVNGD--RVDVTGEFVENGTE-THFTIGDTPAY 103 (127)
Q Consensus 74 w~nG~--~iet~geFvd~Gte-t~F~lg~~~c~ 103 (127)
|.||. ..-..+||.+||.- .....++..|.
T Consensus 99 ~~~g~~~~~~~~re~~~d~~l~~~~~~~~v~~~ 131 (137)
T 2g7b_A 99 LLKGEGPKTSWTLELTNDGELIETMTADDVVCT 131 (137)
T ss_dssp ESSSCCCCEEEEEEECTTSCEEEEEEETTEEEE
T ss_pred ccCCCCCcEEEEEEEcCCCEEEEEEEECCEEEE
Confidence 55677 45667888777433 55677777664
No 43
>3r8n_I 30S ribosomal protein S9; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_I 3fih_I* 3iy8_I 3j18_I* 2wwl_I 3oar_I 3oaq_I 3ofb_I 3ofa_I 3ofp_I 3ofx_I 3ofy_I 3ofo_I 3r8o_I 4a2i_I 4gd1_I 4gd2_I 2qal_I* 1p6g_I 1p87_I ...
Probab=26.55 E-value=45 Score=24.02 Aligned_cols=25 Identities=20% Similarity=0.446 Sum_probs=19.3
Q ss_pred ceEEEEEEccCCceEEEEEEECCeehHhhh
Q psy16754 16 VPCLIKIEPSGPFGYAYSITVDGKTLEKFS 45 (127)
Q Consensus 16 ~k~~I~I~a~~gf~YeYsL~V~GKsl~kf~ 45 (127)
.-|.+.+.+-.| .+.|||+|+++|-
T Consensus 12 avArv~l~~G~G-----~i~VNg~~l~~yf 36 (127)
T 3r8n_I 12 SAARVFIKPGNG-----KIVINQRSLEQYF 36 (127)
T ss_dssp CEEEEEEEESCS-----CEEETTBCSTTTT
T ss_pred EEEEEEEEeCcE-----EEEECCEeHHHHc
Confidence 457788877554 3889999999886
No 44
>4a1y_A Myelin P2 protein; transport; HET: PLM; 1.20A {Homo sapiens} PDB: 2wut_A* 4a1h_A* 1pmp_A* 1yiv_A*
Probab=26.52 E-value=1.7e+02 Score=20.49 Aligned_cols=28 Identities=7% Similarity=0.178 Sum_probs=19.0
Q ss_pred cCEEeceeeeeeeCCeeEEEEeCCccEE
Q psy16754 76 NGDRVDVTGEFVENGTETHFTIGDTPAY 103 (127)
Q Consensus 76 nG~~iet~geFvd~Gtet~F~lg~~~c~ 103 (127)
||...-..+||.++.-......++..|.
T Consensus 100 ~gk~~~~~Re~~~~~lv~t~t~~~v~~~ 127 (133)
T 4a1y_A 100 DGKETTIKRKLVNGKMVAECKMKGVVCT 127 (133)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEE
T ss_pred CCCeEEEEEEEECCEEEEEEEECCEEEE
Confidence 6777777788877655566677776553
No 45
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=26.40 E-value=74 Score=22.24 Aligned_cols=36 Identities=14% Similarity=0.200 Sum_probs=22.4
Q ss_pred ccee-EEEcCEEeceeeeeeeCCee----EEEEeCCccEEEEE
Q psy16754 69 GTLD-IWVNGDRVDVTGEFVENGTE----THFTIGDTPAYIKA 106 (127)
Q Consensus 69 ~tmd-vw~nG~~iet~geFvd~Gte----t~F~lg~~~c~I~a 106 (127)
.+.- |||||+++ ..- ..-+|.. -.+.+|+..++++.
T Consensus 59 S~nGtVFVNGqrv-~~~-~I~~gDtI~g~v~lrFGnvea~l~~ 99 (102)
T 3uv0_A 59 ALVGKIFVNDQEE-TVV-DIGMENAVAGKVKLRFGNVEARLEF 99 (102)
T ss_dssp ESSSCEEETTEEE-SEE-EECGGGCBTTEEEEEETTEEEEEEE
T ss_pred eccCcEEECCEEe-eeE-EccCCcccccEEEEEecCEEEEEEe
Confidence 6667 89999999 332 3222222 24677777777653
No 46
>2c8m_A Lipoate-protein ligase A; lipoylation; HET: LPA; 1.89A {Thermoplasma acidophilum} SCOP: d.104.1.3 PDB: 2art_A* 2aru_A* 2c7i_A 2ars_A* 3r07_A
Probab=26.10 E-value=75 Score=24.18 Aligned_cols=29 Identities=14% Similarity=0.204 Sum_probs=21.7
Q ss_pred cceeEEEcCEEeceeeeeeeCCee-EEEEe
Q psy16754 69 GTLDIWVNGDRVDVTGEFVENGTE-THFTI 97 (127)
Q Consensus 69 ~tmdvw~nG~~iet~geFvd~Gte-t~F~l 97 (127)
..-|||++|+||-..+..+-.|.. .|+++
T Consensus 135 g~~dv~v~g~Ki~G~aqr~~~~~~lhhgtl 164 (262)
T 2c8m_A 135 KKTDIMAGEKKIMGAAGAMRKGAKLWHAAM 164 (262)
T ss_dssp BTTSEEETTEEEEEEEEEEETTEEEEEEEE
T ss_pred CcCcEEECCeEEEEeeeEEeCCEEEEEEEE
Confidence 457899999999776666555544 78877
No 47
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=25.88 E-value=43 Score=21.04 Aligned_cols=32 Identities=9% Similarity=0.102 Sum_probs=21.7
Q ss_pred eEEEcCEEeceeeeeeeCCeeEEEEeCCccEEEE
Q psy16754 72 DIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIK 105 (127)
Q Consensus 72 dvw~nG~~iet~geFvd~Gtet~F~lg~~~c~I~ 105 (127)
.|.+||+.+...+.=++.|. ..++++.+..|.
T Consensus 47 ~V~VNG~~v~~~~~~v~~gd--~I~v~~~~~~~~ 78 (79)
T 1p9k_A 47 QVKVDGAVETRKRCKIVAGQ--TVSFAGHSVQVV 78 (79)
T ss_dssp HHEETTBCCCCSSCCCCSSE--EEEETTEEEEEE
T ss_pred EEEECCEEecCCCCCCCCCC--EEEECCEEEEEe
Confidence 47889988766666667664 356777776554
No 48
>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}
Probab=25.71 E-value=46 Score=21.43 Aligned_cols=18 Identities=28% Similarity=0.523 Sum_probs=14.7
Q ss_pred eceeeeeeeCCeeEEEEe
Q psy16754 80 VDVTGEFVENGTETHFTI 97 (127)
Q Consensus 80 iet~geFvd~Gtet~F~l 97 (127)
|+...=|.|||+..||.=
T Consensus 7 IeEVnmfk~dg~vihF~n 24 (66)
T 3lkx_A 7 IEEVNMFTNQGTVIHFNN 24 (66)
T ss_dssp EEEEEEEETTSEEEEEES
T ss_pred eeEEEEEecCCEEEEecC
Confidence 566677999999999963
No 49
>2vqe_I 30S ribosomal protein S9, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.14.1.1 PDB: 1gix_L* 1hnw_I* 1hnx_I* 1hnz_I* 1hr0_I 1i94_I* 1i95_I* 1i96_I* 1i97_I* 1ibk_I* 1ibl_I* 1ibm_I 1j5e_I 1jgo_L* 1jgp_L* 1jgq_L* 1ml5_L* 1n32_I* 1n33_I* 1n34_I ...
Probab=25.14 E-value=50 Score=23.81 Aligned_cols=25 Identities=16% Similarity=0.430 Sum_probs=19.0
Q ss_pred ceEEEEEEccCCceEEEEEEECCeehHhhh
Q psy16754 16 VPCLIKIEPSGPFGYAYSITVDGKTLEKFS 45 (127)
Q Consensus 16 ~k~~I~I~a~~gf~YeYsL~V~GKsl~kf~ 45 (127)
.-|.+++.+-.| .+.|||+|+++|-
T Consensus 13 avArv~l~~G~G-----~i~VNg~~l~~yf 37 (128)
T 2vqe_I 13 AVARVFLRPGNG-----KVTVNGQDFNEYF 37 (128)
T ss_dssp EEEEEEEEESSC-----CEEESSSBHHHHS
T ss_pred EEEEEEEEcCce-----EEEECCCcHHHHc
Confidence 456777877443 5789999999995
No 50
>3j20_K 30S ribosomal protein S9P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.06 E-value=63 Score=23.41 Aligned_cols=25 Identities=16% Similarity=0.232 Sum_probs=19.0
Q ss_pred ceEEEEEEccCCceEEEEEEECCeehHhhh
Q psy16754 16 VPCLIKIEPSGPFGYAYSITVDGKTLEKFS 45 (127)
Q Consensus 16 ~k~~I~I~a~~gf~YeYsL~V~GKsl~kf~ 45 (127)
.-|.+.+.+-.| .+.|||+|++.|-
T Consensus 13 AvArv~l~~G~G-----~i~VNg~~l~~y~ 37 (135)
T 3j20_K 13 AIARAVIREGKG-----RVRINGKPVEIIE 37 (135)
T ss_dssp EEEEEEEEESSC-----CEEETTEEGGGCS
T ss_pred EEEEEEEEeCce-----EEEECCeeHHHHC
Confidence 456777777544 3889999999886
No 51
>2p0l_A Lipoate-protein ligase A; PFAM, lopoate-protein ligase A, 10425H, structural genomics, structure initiative, PSI-2; 2.04A {Streptococcus agalactiae} SCOP: d.104.1.3
Probab=24.03 E-value=86 Score=24.40 Aligned_cols=30 Identities=13% Similarity=0.194 Sum_probs=21.7
Q ss_pred ccceeEEEcCEEeceeeeeeeCCee-EEEEe
Q psy16754 68 RGTLDIWVNGDRVDVTGEFVENGTE-THFTI 97 (127)
Q Consensus 68 K~tmdvw~nG~~iet~geFvd~Gte-t~F~l 97 (127)
...-|||++|+||-..+..+-.|.. .|+++
T Consensus 150 ~g~~Dl~v~grKI~G~Aqr~~~~~~lhh~sl 180 (288)
T 2p0l_A 150 PGKFDLSINGKKFAGLAQRRIKNGIAVSIYL 180 (288)
T ss_dssp CCTTCEEETTEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCccEEECCEEEEEEeEEEeCCEEEEEEEE
Confidence 4568999999999777776665555 56554
No 52
>1igq_A Transcriptional repressor protein KORB; SH3 domain, dimerization domain; 1.70A {Escherichia coli} SCOP: b.34.1.3 PDB: 1igu_A
Probab=23.96 E-value=1e+02 Score=19.82 Aligned_cols=43 Identities=21% Similarity=0.441 Sum_probs=29.9
Q ss_pred EEeeCCeeEEEEEEccce---eEEEcCEEeceeeeeeeCCeeEEEEeCCccEEEEEE
Q psy16754 54 IVTVEDETYRVVLERGTL---DIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKAV 107 (127)
Q Consensus 54 ~~~i~g~~~RIvLdK~tm---dvw~nG~~iet~geFvd~Gtet~F~lg~~~c~I~a~ 107 (127)
.+..||...|++|.+-.. -+|+ .|-|+|.| |++.-..+.|.+.
T Consensus 14 ~V~~dgR~arlllnrRps~~G~~wi---------KyED~G~e--~E~d~~~v~l~al 59 (62)
T 1igq_A 14 QVEHDERPARLILNRRPPAEGYAWL---------KYEDDGQE--FEANLADVKLVAL 59 (62)
T ss_dssp EEEETTEEEEECTTBCCSSTTEEEE---------EETTTCCE--EEEEGGGCEEEEE
T ss_pred EEEECChhhhhhhccCCCcCceEEE---------EEecCCcE--EEEeccceEEEee
Confidence 456799999999987653 2566 46688865 5776666666654
No 53
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=23.75 E-value=1.6e+02 Score=21.69 Aligned_cols=25 Identities=20% Similarity=0.429 Sum_probs=16.3
Q ss_pred CCeeEEEE--EEc--cceeEEEcCEEece
Q psy16754 58 EDETYRVV--LER--GTLDIWVNGDRVDV 82 (127)
Q Consensus 58 ~g~~~RIv--LdK--~tmdvw~nG~~iet 82 (127)
+|+=+-|+ .|- .++.+|+||+.+.+
T Consensus 96 ~g~W~Hv~~t~d~~~G~~~lYvdG~~~~~ 124 (217)
T 3flp_A 96 LGQWYHVCHVWSGVDGRMAVYANGSPCGT 124 (217)
T ss_dssp TTSCEEEEEEEETTTTEEEEEETTEEEEE
T ss_pred CCCEEEEEEEEECCCCEEEEEECCEEecc
Confidence 45434444 343 36899999998854
No 54
>3uep_A YSCQ-C, type III secretion protein; cytosol, protein transport; 2.25A {Yersinia pseudotuberculosis}
Probab=23.55 E-value=60 Score=21.77 Aligned_cols=24 Identities=21% Similarity=0.350 Sum_probs=17.0
Q ss_pred EEEEEEc---cceeEEEcCEEeceeeee
Q psy16754 62 YRVVLER---GTLDIWVNGDRVDVTGEF 86 (127)
Q Consensus 62 ~RIvLdK---~tmdvw~nG~~iet~geF 86 (127)
--|.||+ +.++|+|||+.+ ..||.
T Consensus 44 dVI~Ld~~~~~~v~i~vng~~i-~~Ge~ 70 (96)
T 3uep_A 44 SLIDLTTPVDGEVRLLANGRLL-GHGRL 70 (96)
T ss_dssp CEEEEEEESSCEEEEEETTEEE-EEEEE
T ss_pred CEEEeCCCCCCcEEEEECCEEE-EEEEE
Confidence 3467776 789999999776 33443
No 55
>2p5i_A BH3822 protein; PFAM03099, structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 2.21A {Bacillus halodurans c-125} SCOP: d.104.1.3
Probab=22.41 E-value=97 Score=24.05 Aligned_cols=30 Identities=13% Similarity=0.264 Sum_probs=22.0
Q ss_pred ccceeEEEcCEEeceeeeeeeCCee-EEEEe
Q psy16754 68 RGTLDIWVNGDRVDVTGEFVENGTE-THFTI 97 (127)
Q Consensus 68 K~tmdvw~nG~~iet~geFvd~Gte-t~F~l 97 (127)
...-|||++|+||-..+..+-.|.. .|+++
T Consensus 151 ~g~~dl~v~grKI~G~Aqr~~~~~~lhh~~l 181 (288)
T 2p5i_A 151 PGSYDLSIDGKKFAGISQRRIRGGVAVQIYL 181 (288)
T ss_dssp CCTTCEEETTEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCccEEECCEEEEEEEEEEeCCEEEEEEEE
Confidence 4568999999999777776666654 56555
No 56
>1vqz_A Lipoate-protein ligase, putative; class II AARS and biotin synthetases fold, SUFE/NIFU fold, S genomics; HET: MSE; 1.99A {Streptococcus pneumoniae} SCOP: d.224.1.3 d.104.1.3
Probab=21.63 E-value=1e+02 Score=24.72 Aligned_cols=29 Identities=21% Similarity=0.257 Sum_probs=22.1
Q ss_pred cceeEEEcCEEeceeeeeeeCCee-EEEEe
Q psy16754 69 GTLDIWVNGDRVDVTGEFVENGTE-THFTI 97 (127)
Q Consensus 69 ~tmdvw~nG~~iet~geFvd~Gte-t~F~l 97 (127)
..-|||++|+||-..+..+-.|.. .|+++
T Consensus 132 gr~Di~v~grKIsG~Aqr~~~~~~lhhgtl 161 (341)
T 1vqz_A 132 GRNDLEIDGKKFCGNAQAYINGRIMHHGCL 161 (341)
T ss_dssp TTTEEEETTEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEeCEEEEEEEEEEECCEEEEEEEE
Confidence 557999999999777776666555 67766
No 57
>4b0m_A F1 capsule-anchoring protein; protein transport, chaperone-usher pathway, PILI assembly; 1.80A {Yersinia pestis} PDB: 4b0e_A
Probab=21.47 E-value=92 Score=21.81 Aligned_cols=18 Identities=33% Similarity=0.719 Sum_probs=12.9
Q ss_pred ceeEEEcCEEeceee-eee
Q psy16754 70 TLDIWVNGDRVDVTG-EFV 87 (127)
Q Consensus 70 tmdvw~nG~~iet~g-eFv 87 (127)
.+|||+||+.+.+.. +|.
T Consensus 33 ~vdI~vN~~~~~~~~i~F~ 51 (136)
T 4b0m_A 33 FVNVFVNGRKVDSGNIDFR 51 (136)
T ss_dssp EEEEEETTEEEEEEEEEEE
T ss_pred EEEEEECCccccceEEEEE
Confidence 378999999885543 474
No 58
>3u5c_Q RP61R, 40S ribosomal protein S16-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_I 3o30_J 3o2z_J 3u5g_Q 1s1h_I 3jyv_I*
Probab=21.17 E-value=70 Score=23.39 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=19.1
Q ss_pred ceEEEEEEccCCceEEEEEEECCeehHhhh
Q psy16754 16 VPCLIKIEPSGPFGYAYSITVDGKTLEKFS 45 (127)
Q Consensus 16 ~k~~I~I~a~~gf~YeYsL~V~GKsl~kf~ 45 (127)
.-|.+.+.+-.| .+.|||+|++.|-
T Consensus 16 AvArv~l~~G~G-----~i~VNg~~l~~y~ 40 (143)
T 3u5c_Q 16 ATAVAHVKAGKG-----LIKVNGSPITLVE 40 (143)
T ss_dssp CEEEEEEEECSC-----CEEETTEETTTCS
T ss_pred eEEEEEEEeCce-----EEEECCCcHHHHC
Confidence 446777777544 3889999999986
No 59
>2vve_A Spike protein P1; viral stem-receptor binding domain, viral protein; 1.77A {Pseudoalteromonas phage PM2} PDB: 2vvd_A
Probab=20.73 E-value=28 Score=27.05 Aligned_cols=36 Identities=22% Similarity=0.586 Sum_probs=26.6
Q ss_pred ccceeEEEcCEEeceeeeeeeCCeeEEEEeCCccEEEEE
Q psy16754 68 RGTLDIWVNGDRVDVTGEFVENGTETHFTIGDTPAYIKA 106 (127)
Q Consensus 68 K~tmdvw~nG~~iet~geFvd~Gtet~F~lg~~~c~I~a 106 (127)
|...|||+.|+.|.+..--+|+|.. |+- +..++|-+
T Consensus 39 kspvdiwiggenmtalngivdggrk--fea-gqefqint 74 (254)
T 2vve_A 39 KSPVDIWIGGENMTALNGIVDGGRK--FEA-GQEFQINT 74 (254)
T ss_dssp ECSSCEEEECTTCBCGGGCCBSCEE--ECT-TCEEEECC
T ss_pred CCCceEEEccccchhhcceecCccc--ccc-CceEEeec
Confidence 6678999999999999899999975 333 33444443
No 60
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=20.60 E-value=30 Score=21.80 Aligned_cols=12 Identities=42% Similarity=0.872 Sum_probs=9.3
Q ss_pred EEEEEECCeehH
Q psy16754 31 AYSITVDGKTLE 42 (127)
Q Consensus 31 eYsL~V~GKsl~ 42 (127)
.|.|-|||+.|+
T Consensus 2 ~YKLving~t~~ 13 (56)
T 3fil_A 2 QYKLILNGKTLK 13 (56)
T ss_dssp EEEEEEECSSCE
T ss_pred ceEEEEeccccc
Confidence 588888888764
No 61
>1ifc_A Intestinal fatty acid binding protein; lipid-binding protein; 1.19A {Rattus norvegicus} SCOP: b.60.1.2 PDB: 1ael_A 1icm_A* 1ifb_A 1ure_A* 2ifb_A* 3akn_A* 1icn_A* 1t8v_A 1dc9_A 1a57_A 1kzx_A 1kzw_A 3akm_A* 3ifb_A 1sa8_A
Probab=20.02 E-value=2.2e+02 Score=19.63 Aligned_cols=28 Identities=21% Similarity=0.191 Sum_probs=15.1
Q ss_pred cCEEeceeeeeeeCCeeEEEEeCCccEE
Q psy16754 76 NGDRVDVTGEFVENGTETHFTIGDTPAY 103 (127)
Q Consensus 76 nG~~iet~geFvd~Gtet~F~lg~~~c~ 103 (127)
||.+....+||.+|--......++..|.
T Consensus 99 dg~~~~~~re~~g~~l~~~~~~~~v~~~ 126 (132)
T 1ifc_A 99 NGKELIAVREISGNELIQTYTYEGVEAK 126 (132)
T ss_dssp TCCEEEEEEEEETTEEEEEEEETTEEEE
T ss_pred CCCeEEEEEEEECCEEEEEEEECCEEEE
Confidence 4555566666644433345555555554
Done!