Query psy16759
Match_columns 512
No_of_seqs 307 out of 1922
Neff 6.3
Searched_HMMs 46136
Date Fri Aug 16 21:17:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16759.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16759hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3619|consensus 100.0 2.4E-79 5.2E-84 680.3 33.1 413 8-506 369-841 (867)
2 KOG3618|consensus 100.0 1.8E-51 3.8E-56 439.1 18.4 261 154-511 1013-1274(1318)
3 KOG4171|consensus 100.0 1.9E-48 4E-53 420.0 25.3 237 166-509 384-621 (671)
4 KOG3618|consensus 100.0 4.8E-36 1E-40 321.2 26.9 241 168-509 250-528 (1318)
5 KOG1023|consensus 100.0 6.1E-37 1.3E-41 327.1 16.5 221 185-510 256-477 (484)
6 PF00211 Guanylate_cyc: Adenyl 100.0 1.2E-35 2.7E-40 279.9 16.9 182 226-507 2-184 (184)
7 KOG3619|consensus 100.0 2.4E-35 5.2E-40 329.0 21.0 259 149-509 22-291 (867)
8 smart00044 CYCc Adenylyl- / gu 100.0 3.4E-30 7.3E-35 245.6 19.9 189 192-485 2-191 (194)
9 COG2114 CyaA Adenylate cyclase 100.0 3.4E-28 7.4E-33 239.1 19.0 195 197-509 22-217 (227)
10 cd07302 CHD cyclase homology d 100.0 1.7E-27 3.7E-32 219.7 19.2 174 232-505 1-177 (177)
11 cd07556 Nucleotidyl_cyc_III Cl 99.0 1E-08 2.2E-13 89.9 13.6 131 233-469 2-132 (133)
12 PF06327 DUF1053: Domain of Un 97.4 5E-05 1.1E-09 65.6 0.8 29 8-36 73-101 (101)
13 PF07701 HNOBA: Heme NO bindin 94.5 0.17 3.6E-06 50.0 8.4 47 166-212 173-219 (219)
14 PRK10245 adrA diguanylate cycl 93.2 13 0.00028 39.3 23.7 58 231-296 235-292 (366)
15 COG3887 Predicted signaling pr 83.7 83 0.0018 35.7 18.1 55 235-297 177-232 (655)
16 COG3706 PleD Response regulato 65.7 69 0.0015 35.0 11.6 35 231-266 300-334 (435)
17 PF05165 GGDN: GGDN family; I 65.5 54 0.0012 33.1 10.0 60 231-297 126-186 (246)
18 COG2205 KdpD Osmosensitive K+ 58.0 2.6E+02 0.0057 33.1 14.8 46 190-244 510-555 (890)
19 COG2429 Archaeal GTP cyclohydr 53.3 86 0.0019 31.3 8.8 62 231-299 130-192 (250)
20 PF05297 Herpes_LMP1: Herpesvi 49.4 5.6 0.00012 40.7 0.0 13 166-178 160-172 (381)
21 PF09726 Macoilin: Transmembra 48.6 2.4E+02 0.0053 32.8 13.0 24 184-207 181-204 (697)
22 PF06123 CreD: Inner membrane 46.5 2.3E+02 0.0049 31.1 11.6 36 14-52 279-318 (430)
23 PRK10490 sensor protein KdpD; 45.0 2.6E+02 0.0056 33.5 12.9 20 192-211 515-534 (895)
24 PRK11715 inner membrane protei 40.1 2.6E+02 0.0056 30.7 10.9 37 13-52 284-324 (436)
25 PRK15426 putative diguanylate 38.4 5.7E+02 0.012 28.1 15.6 58 231-296 428-485 (570)
26 PF13974 YebO: YebO-like prote 37.3 1.1E+02 0.0024 25.6 5.8 35 173-208 20-54 (80)
27 PRK11677 hypothetical protein; 29.4 2.5E+02 0.0055 25.7 7.4 44 152-195 8-51 (134)
28 PRK02240 GTP cyclohydrolase II 29.2 1.3E+02 0.0028 30.5 6.0 60 231-296 133-193 (254)
29 PF05297 Herpes_LMP1: Herpesvi 25.7 23 0.0005 36.4 0.0 8 95-102 114-121 (381)
30 COG3565 Predicted dioxygenase 25.4 67 0.0015 28.9 2.8 76 433-508 23-119 (138)
31 PF06570 DUF1129: Protein of u 23.0 6.8E+02 0.015 24.1 13.3 35 116-150 150-184 (206)
32 PF06305 DUF1049: Protein of u 21.9 3.8E+02 0.0082 20.7 7.2 20 178-197 46-65 (68)
No 1
>KOG3619|consensus
Probab=100.00 E-value=2.4e-79 Score=680.33 Aligned_cols=413 Identities=42% Similarity=0.657 Sum_probs=355.0
Q ss_pred CCCCcccEEEEecCchhhcccccCCccchhhHHHHH-H---HHHHHhhhhccchhHHHHHHHH-----HHHHHH------
Q psy16759 8 NTDDLNPVFLWFKDGAHELGFRHFPDPQYRFYVSLT-V---GLLVIVTTYMESSILTVAIVFI-----FLRVGF------ 72 (512)
Q Consensus 8 ~~~~i~~ftL~Fkd~~LE~kY~~~~D~~fk~yl~c~-v---~I~iIQ~Li~p~s~l~~i~i~I-----~lli~~------ 72 (512)
+++++++++++|+++++|++|++..|+.|..+++|. + +...+|.++.|+.......+.. .++...
T Consensus 369 ~~~~~~~~~~~~~~~~~e~~y~~~~~~~f~~~~~~~ll~~~~~~~~~~~~~p~~v~~l~~l~~~f~~l~~~~~~~~~~~l 448 (867)
T KOG3619|consen 369 RSEDMNPFELRFKNIELEKKYSQCRDEYFTSPLGCALLVLCFDGLYQLLIIPRSLLLLLCLSSAFVCLLLCVVLLMPDSL 448 (867)
T ss_pred hhhhcchHhhcccccchhhcchhhhhhhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhhhHhh
Confidence 678999999999999999999999999999999992 2 2477888899987655421111 111000
Q ss_pred -----------------------HH---HHHHHHhhhhc---------------ccchh--hHHHHHHHHHHHHHHHHHH
Q psy16759 73 -----------------------LV---KLVSMVCVVLL---------------HFVVY--STYMESSILTVAIVFIFLR 109 (512)
Q Consensus 73 -----------------------l~---~visli~~~~~---------------~~~~~--P~~~~~~~l~~~~~~~f~~ 109 (512)
+. .+++++.|... .+... +++.+++.++++.+++|.|
T Consensus 449 ~~~~~~~~~~~~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~~~~~~~~~s~~l~~i~~~vf~r 528 (867)
T KOG3619|consen 449 QWLSPKIFRTRIARTALSIFTVLIIYMVALINMFACLFSSCIPNHTITFSSISERCEAVPQLYFLLSCVLGLLSTAVFLR 528 (867)
T ss_pred cccchhhhcchHHHHHHHHHHHHHHHHHHHheeEeeccccccCccccccccccccccccCcchhHHHHHHHHHHHHheee
Confidence 00 01111111000 01112 4777899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh--cccCCCChhhhHHHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHH
Q psy16759 110 VGFLVKLVSMVCVVLLHFVVYSVQNLF--FPYRYDDLPYQLTTWFPILILIILFHILDRQMEFTARTDFLWQAKLKVEQD 187 (512)
Q Consensus 110 ~~~~~k~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~r~~e~~~R~~f~~~~~~~~~~~ 187 (512)
++++.|++++++.+..|.++....... ..-..+..+.++.+.+.++++++.+++++||.|+++|+||+||.|+++|++
T Consensus 529 l~~~~k~llll~~~~~y~~l~~~~~~~~~~~~~~~~~~~k~~~~i~l~lf~l~l~~~~Rq~E~~~RlDFLWk~q~~~E~e 608 (867)
T KOG3619|consen 529 LPFMLKLLLLLIVFAAYGLLIELSYARELDEEPLPYMGLKLMLSILLSLFLLALLLHARQVEYTARLDFLWKVQAQEEKE 608 (867)
T ss_pred ccHHHHHHHHHHHHHHHHhheeeeeccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999998775444332 233347789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHhcCCCCCccccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHH
Q psy16759 188 DVETMRGINKILLENILPAHVAQHFLHSSSSSRVTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEII 267 (512)
Q Consensus 188 ~~~~~~~~~~~lL~~~lP~~V~~~ll~~~~~~~~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~ 267 (512)
++|++++.|+.||+|+||+|||.+|+.++ ++++++|+++|++|+||||+|+||.+++.+.+.|+++.||+|+|||++
T Consensus 609 e~e~m~~~Nr~LLeNiLPaHVA~HFl~~~---~r~~eLY~qSy~~VgVMFASipnF~dFYsE~d~NneGlECLRlLNEII 685 (867)
T KOG3619|consen 609 EMETMQNLNRLLLENILPSHVAAHFLGSK---KRNEELYHQSYDCVGVMFASIPNFKDFYSECDVNNEGLECLRLLNEII 685 (867)
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHhhcc---cchHHHHHhhhceEEEEEEecCCcceeeeeecCCcccchHHHHHHHHH
Confidence 99999999999999999999999999887 455899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcch
Q psy16759 268 CDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNS 347 (512)
Q Consensus 268 ~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (512)
++||+++.+++|+++|||||||+|||||+||.+...+....+ ...+.|+
T Consensus 686 aDFDeLL~~pkF~~IEKIKTIGSTYMAAsGL~~~~~~~~~~~-------------------------------~~~~~h~ 734 (867)
T KOG3619|consen 686 ADFDELLSKPKFSGVEKIKTIGSTYMAASGLNPTSAQENDQS-------------------------------LRQWSHL 734 (867)
T ss_pred hhHHHhcCccccccceeEEEecchhhhhhCCChhhhhccCcc-------------------------------hhHHhhH
Confidence 999999999999999999999999999999997776544320 0123488
Q ss_pred hhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccCCCcchhhhhcccccccccccccCccccccccceeEE
Q psy16759 348 VVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVL 427 (512)
Q Consensus 348 ~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lr 427 (512)
..++ ++|++|+. .|++ +|.+++++|. +|
T Consensus 735 ~~l~----eFAlal~~---------------~L~~------------------IN~~SfNnF~---------------Lr 762 (867)
T KOG3619|consen 735 GALV----EFALALMH---------------KLDE------------------INRHSFNNFE---------------LR 762 (867)
T ss_pred HHHH----HHHHHHHH---------------HHHh------------------hhHHhhccce---------------ee
Confidence 8999 99999999 9999 9999999999 99
Q ss_pred EEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCCCCcEEECHHHHHHHhcCCceEEEcceEEeecCCceeEEEEe
Q psy16759 428 TGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMASGYDCKCRGQIFVKGKGTLTTYFVK 506 (512)
Q Consensus 428 IGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I~vse~t~~~l~~~~~~~~~rg~v~vKGkg~~~ty~v~ 506 (512)
||||+|||+|||||++||||||||||||+||||||||++|+|||||||+.+|+..||.|.+||.+.|||||+|.|||+.
T Consensus 763 IGin~GpvvAGVIGArKPqYDIWGNTVNvASRMdSTGv~g~IQVTEEt~~iL~~~gy~~~~RG~i~VKGkGel~Tyfl~ 841 (867)
T KOG3619|consen 763 IGINHGPVVAGVIGARKPQYDIWGNTVNVASRMDSTGVPGRIQVTEETANILQGLGYRFECRGVINVKGKGELETYFLC 841 (867)
T ss_pred eceeccceeeeEecCCCCCccccccchhhhhcccccCCCCeEEecHHHHHHHhcCCeeEEecceEEEecccceeEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999998
No 2
>KOG3618|consensus
Probab=100.00 E-value=1.8e-51 Score=439.10 Aligned_cols=261 Identities=41% Similarity=0.640 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhcCCCCCccccccccccceE
Q psy16759 154 ILILIILFHILDRQMEFTARTDFLWQAKLKVEQDDVETMRGINKILLENILPAHVAQHFLHSSSSSRVTQDLYHERYNCI 233 (512)
Q Consensus 154 i~~~~~~~~~~~r~~e~~~R~~f~~~~~~~~~~~~~~~~~~~~~~lL~~~lP~~V~~~ll~~~~~~~~~~~l~~~~~~~V 233 (512)
+++.++..+++.|+-|...|+.|.-..++...+.+++.+|.+.+-||+|+.|.||+++|..+ .-|.|+++++
T Consensus 1013 ~~L~lvLVwFLNreFE~~yRl~f~Gdv~A~~d~~riQ~mrdQADwLL~NiIP~HvaE~LK~~--------~kYSeNH~~~ 1084 (1318)
T KOG3618|consen 1013 FFLLLVLVWFLNREFEVSYRLHFHGDVEADLDRTRIQSMRDQADWLLRNIIPYHVAEQLKVS--------QKYSENHDSG 1084 (1318)
T ss_pred HHHHHHHHHHhhhheeeeEEEEEecchhhchhHHHHHHHHHHHHHHHhccchHHHHHHhhcc--------ccccccCccc
Confidence 44555667788999999999999999999999999999999999999999999999999887 4699999999
Q ss_pred EEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCcccc
Q psy16759 234 GVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNVFH 313 (512)
Q Consensus 234 tVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~~~ 313 (512)
+|+||+|+||.+++|++ -..++|++|+|||++.+||+++.++.|..+|||||||.|||||+||.+.+...-.
T Consensus 1085 gviFASIvNfnemYeEn--yeGGkEflRVLNElIGDFDELLsrPdf~~iEKIKTIG~tyMAASGLnp~~~~~~~------ 1156 (1318)
T KOG3618|consen 1085 GVIFASIVNFNEMYEEN--YEGGKEFLRVLNELIGDFDELLSRPDFSSIEKIKTIGATYMAASGLNPAQAQDGS------ 1156 (1318)
T ss_pred eEEEEEeccHHHHHHHh--hhchHHHHHHHHHHhccHHHHhccccchhhHHHhhhhHHHHHhcCCChHHccCCC------
Confidence 99999999999999985 2478999999999999999999999999999999999999999999977654211
Q ss_pred ccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccCCC
Q psy16759 314 LILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHSSN 393 (512)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 393 (512)
+...|...+. +||++|++ .++.
T Consensus 1157 ----------------------------hp~EHl~~l~----eFa~amq~---------------Vvd~----------- 1178 (1318)
T KOG3618|consen 1157 ----------------------------HPQEHLQILF----EFAKAMQR---------------VVDD----------- 1178 (1318)
T ss_pred ----------------------------ChHHHHHHHH----HHHHHHHH---------------HHHH-----------
Confidence 1223777888 99999999 7887
Q ss_pred cchhhhhccccccc-ccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCCCCcEEEC
Q psy16759 394 VSTVLFYRNRTSEM-DINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVT 472 (512)
Q Consensus 394 ~~~~~~~~n~~~~~-~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I~vs 472 (512)
+|+..-+ ++. +|+|.|.|||.|||||..|.-|||||||||+||||+|||++.+||||
T Consensus 1179 -------FN~dlL~Fnf~---------------lrvG~NiGpvTAGVIGTtKLyYDIWGDtVNiASRMdsTGv~nRIQVs 1236 (1318)
T KOG3618|consen 1179 -------FNNDLLWFNFK---------------LRVGFNIGPVTAGVIGTTKLYYDIWGDTVNIASRMDSTGVENRIQVS 1236 (1318)
T ss_pred -------hhhhhhheeee---------------EEeeccccCccccccccceeeehhhcchhhhhhhccccCCcceeEec
Confidence 7665433 566 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEcceEEeecCCceeEEEEecCCCC
Q psy16759 473 EDTAKILMASGYDCKCRGQIFVKGKGTLTTYFVKMPYES 511 (512)
Q Consensus 473 e~t~~~l~~~~~~~~~rg~v~vKGkg~~~ty~v~~~~~~ 511 (512)
++++..|.+ .|+|++||.+.||||+.|.||...+++++
T Consensus 1237 ~~~~~~L~~-rYeFe~Rg~v~VKGkd~M~tyLy~~r~d~ 1274 (1318)
T KOG3618|consen 1237 EESYRVLSK-RYEFEYRGTVNVKGKDQMKTYLYPKRTDH 1274 (1318)
T ss_pred HHHHHHHHh-hccccccceEEEeccCcceeEEeccccCC
Confidence 999999998 59999999999999999999998776553
No 3
>KOG4171|consensus
Probab=100.00 E-value=1.9e-48 Score=420.01 Aligned_cols=237 Identities=27% Similarity=0.501 Sum_probs=214.7
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhcCCCCCccccccccccceEEEEEEecCchhh
Q psy16759 166 RQMEFTARTDFLWQAKLKVEQDDVETMRGINKILLENILPAHVAQHFLHSSSSSRVTQDLYHERYNCIGVMFASIPNYKE 245 (512)
Q Consensus 166 r~~e~~~R~~f~~~~~~~~~~~~~~~~~~~~~~lL~~~lP~~V~~~ll~~~~~~~~~~~l~~~~~~~VtVmFadI~~Ft~ 245 (512)
-|.|.+.|++-+ +.++++..++++.+|++...||..++|++||++|..++ .+-+.++++|||||+||+||++
T Consensus 384 aq~el~~~lE~~-~~~Le~~~~~Le~EKkkTd~LLy~mlP~~VA~qLr~g~-------~v~a~~f~~vTilFsdIv~Ft~ 455 (671)
T KOG4171|consen 384 AQLELNLELEKL-KEKLEKMTRELEEEKKKTDTLLYSMLPRSVAQQLRQGE-------SVDAKEFDDVTILFSDIVGFTA 455 (671)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHcCC-------CcCccccCceEEEEeccchHHh
Confidence 478888899888 99999999999999999999999999999999999885 6778889999999999999999
Q ss_pred hhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCccccccccccCCCCCC
Q psy16759 246 FYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNVFHLILWIPSRTGLS 325 (512)
Q Consensus 246 ~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (512)
++.. ++|.+++.+||++|+.||+++.-+ +++|++||||+||+++|+|.....
T Consensus 456 ic~~----ctp~~vV~~LN~lyt~fD~~i~~~---~VYKVETIGDaYm~vsG~P~~~~~--------------------- 507 (671)
T KOG4171|consen 456 ICSQ----CTPMQVVNMLNELYTRFDRIIDTH---DVYKVETIGDAYMVVSGLPDASDY--------------------- 507 (671)
T ss_pred Hhhc----cCcHHHHHHHHHHHHHHHHhhccc---CeEEEeeccchheeecCCCCCChh---------------------
Confidence 9987 599999999999999999999977 999999999999999999965544
Q ss_pred CCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccCCCcchhhhhccccc
Q psy16759 326 ESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHSSNVSTVLFYRNRTS 405 (512)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~ 405 (512)
||..++ ++|+.|+. ..++ +.+...
T Consensus 508 --------------------HAe~i~----~~AL~Mm~---------------~ak~-----------------v~~p~~ 531 (671)
T KOG4171|consen 508 --------------------HAEHIA----DLALGMME---------------EAKE-----------------VVSPVT 531 (671)
T ss_pred --------------------HHHHHH----HHHHHHHH---------------Hhhh-----------------hcCcCC
Confidence 566677 99999998 5555 133333
Q ss_pred ccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCCCCcEEECHHHHHHHhcCC-c
Q psy16759 406 EMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMASG-Y 484 (512)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I~vse~t~~~l~~~~-~ 484 (512)
+.++. +|||||+|||+|||||.+.|+|++||||||+||||||++.||+|+||+.|++.|++.+ |
T Consensus 532 ~~pi~---------------iRiGIHsG~VvAGVVG~kmPRYCLFGdTVn~AsrmES~s~p~KI~vS~~T~~~l~~~~~f 596 (671)
T KOG4171|consen 532 GEPIQ---------------IRIGIHSGPVVAGVVGVKMPRYCLFGDTVNLASRMESSSVPGKINVSPTTYRKLKKQGSF 596 (671)
T ss_pred CCceE---------------EEEEeccCCeeeeeecccccceeecCCchhhhhhhhcCCCCceEEeCHHHHHHHHhCCCc
Confidence 45566 9999999999999999999999999999999999999999999999999999999875 9
Q ss_pred eEEEcceEEeecCCceeEEEEecCC
Q psy16759 485 DCKCRGQIFVKGKGTLTTYFVKMPY 509 (512)
Q Consensus 485 ~~~~rg~v~vKGkg~~~ty~v~~~~ 509 (512)
.+++||.+.|||||++.|||+....
T Consensus 597 ~f~pRg~v~vk~kg~m~tyFL~~~~ 621 (671)
T KOG4171|consen 597 EFEPRGRVEVKGKGPMETYFLERSL 621 (671)
T ss_pred eeeecCccccCCCCceEEEEEEecC
Confidence 9999999999999999999998543
No 4
>KOG3618|consensus
Probab=100.00 E-value=4.8e-36 Score=321.23 Aligned_cols=241 Identities=26% Similarity=0.483 Sum_probs=204.4
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhcCCCCCc--------------------------
Q psy16759 168 MEFTARTDFLWQAKLKVEQDDVETMRGINKILLENILPAHVAQHFLHSSSSSRV-------------------------- 221 (512)
Q Consensus 168 ~e~~~R~~f~~~~~~~~~~~~~~~~~~~~~~lL~~~lP~~V~~~ll~~~~~~~~-------------------------- 221 (512)
.....|..|+---|-..-++++|.+++.-+++.+..+|+-||+.|++.+.....
T Consensus 250 ~qVR~R~TFlKVGQs~l~rkdLE~EkqlKe~MIhSVMP~kvAD~Llk~g~~pS~nd~~~~~~~s~~~r~~~s~~vk~~~~ 329 (1318)
T KOG3618|consen 250 SQVRSRSTFLKVGQSILHRKDLEVEKQLKERMIHSVMPRKVADDLLKQGDEPSENDVKRHATSSPKNRKKKSSIVKAPIA 329 (1318)
T ss_pred HHHHhhhhHHHhhHHHHhhhhhHHHHHHHHHHHHhhcChHHHHHHHhhcCCCCcccccCCCCCCcccccchhhccccccc
Confidence 456678889877777778888888899999999999999999999987540000
Q ss_pred cccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCC
Q psy16759 222 TQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPG 301 (512)
Q Consensus 222 ~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~ 301 (512)
-+..-.+.-++|+++||||+|||.+++. +++++++.+||++|.+||+++.-. |+|||.|.||||.+++|.|++
T Consensus 330 FRPF~M~~menVSILFADIvGFTkMSsn----KsA~~LV~lLNDLFgRFD~LC~l~---gcEKISTLGDCYYCVaGCPEP 402 (1318)
T KOG3618|consen 330 FRPFKMQQMENVSILFADIVGFTKMSSN----KSAHALVGLLNDLFGRFDRLCELT---GCEKISTLGDCYYCVAGCPEP 402 (1318)
T ss_pred cCchhhhhhhhhhhhhhhhhchhhcccc----ccHHHHHHHHHHHHHHHHHHHHhc---CcchhccccceeeeecCCCCC
Confidence 0111233457899999999999988765 799999999999999999999886 999999999999999999999
Q ss_pred CCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHH
Q psy16759 302 LEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLW 381 (512)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~ 381 (512)
.+||+ .+++ ++++.|+. +++
T Consensus 403 raDHA-----------------------------------------~ccv----EMGLgMI~---------------Air 422 (1318)
T KOG3618|consen 403 RADHA-----------------------------------------YCCV----EMGLGMIK---------------AIR 422 (1318)
T ss_pred cccce-----------------------------------------eeeh----hhcchHHH---------------HHH
Confidence 98854 4456 99999999 899
Q ss_pred HhhccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhcccc
Q psy16759 382 QALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMD 461 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRme 461 (512)
+ +..+..+..+ +|+|+|+|.|++|++|.+|..||+|.|+||+|+.||
T Consensus 423 q------------------Fd~~r~e~Vn---------------MRVGvHTGtVlCGivGtrRfKFDVwSNDV~LAN~ME 469 (1318)
T KOG3618|consen 423 Q------------------FDQERKEMVN---------------MRVGVHTGTVLCGIVGTRRFKFDVWSNDVNLANLME 469 (1318)
T ss_pred H------------------HHHHhhcccc---------------eEEEEecceEEeeeeecceEeeeeccCcchHHHHHH
Confidence 8 7777777788 999999999999999999999999999999999999
Q ss_pred ccCCCCcEEECHHHHHHHhcCCceEE------EcceEEeecC------CceeEEEEecCC
Q psy16759 462 SCGVVGRLQVTEDTAKILMASGYDCK------CRGQIFVKGK------GTLTTYFVKMPY 509 (512)
Q Consensus 462 s~~~~g~I~vse~t~~~l~~~~~~~~------~rg~v~vKGk------g~~~ty~v~~~~ 509 (512)
|.|++|+++|||+|++.|.+ .|..+ -.|+..|.|. |.+.||++.+..
T Consensus 470 ssGvag~VHiSeaTak~L~d-~Ye~EeG~~~~g~~~~~V~g~~rRtnP~t~kt~li~G~~ 528 (1318)
T KOG3618|consen 470 SSGVAGKVHISEATAKYLDD-RYEMEEGKVIEGLGQSVVAGQLRRTNPGTLKTYLISGQR 528 (1318)
T ss_pred hcCCCcceEeeHHHHHHhcc-cceeccCccccccceeEEeceeeecCCcccceEEecCcc
Confidence 99999999999999999987 35444 3566677773 569999998764
No 5
>KOG1023|consensus
Probab=100.00 E-value=6.1e-37 Score=327.10 Aligned_cols=221 Identities=25% Similarity=0.449 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCHHHHHHHHhcCCCCCccccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHH
Q psy16759 185 EQDDVETMRGINKILLENILPAHVAQHFLHSSSSSRVTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLN 264 (512)
Q Consensus 185 ~~~~~~~~~~~~~~lL~~~lP~~V~~~ll~~~~~~~~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn 264 (512)
..++++.++.+...||.++||+.||+.+..+. ..-++.+++||++|+||+|||.++.. ..|.+++.+||
T Consensus 256 Rt~~l~~e~~k~d~LL~~mLP~~VA~~lk~G~-------~v~pe~~~~vti~fsDiv~fT~l~~~----~~P~~vv~~lN 324 (484)
T KOG1023|consen 256 RTAELEEEKKKTDTLLGQMLPKSVAESLKLGK-------TVDPESFDSVTIYFSDIVGFTVLSSN----STPIQVVTLLN 324 (484)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHhhHhhcCC-------cCCccccCceeeeeHHHHHHHHHHhc----CCCceeeeecc
Confidence 46667788888899999999999999999885 57778889999999999999999987 58999999999
Q ss_pred HHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCC
Q psy16759 265 EIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGE 344 (512)
Q Consensus 265 ~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (512)
++++.||.++.+| +++|+.|+||+||.++|+|.....
T Consensus 325 dlyt~Fd~ii~~~---d~yKVetiGDaYmvvSglp~~n~~---------------------------------------- 361 (484)
T KOG1023|consen 325 DLYTTFDRIIDKH---DVYKVETIGDAYMVVSGLPIRNGY---------------------------------------- 361 (484)
T ss_pred chHHhhhhccccc---CCeeEeccCcceeecccCceecHh----------------------------------------
Confidence 9999999999998 999999999999999999955432
Q ss_pred cchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccCCCcchhhhhcccccccccccccCccccccccce
Q psy16759 345 FNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLI 424 (512)
Q Consensus 345 ~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 424 (512)
.|+..++ .+|++++. .++.+ . +.......++
T Consensus 362 ~H~~eia----~msl~~~~---------------~~~~f---~-------------i~H~P~~~l~-------------- 392 (484)
T KOG1023|consen 362 RHAREIA----SMALGLRS---------------FLESF---S-------------LPHRPWEKLR-------------- 392 (484)
T ss_pred HHHHHHH----HHHHHHHH---------------HHhcc---C-------------CCCCCchhhh--------------
Confidence 1677778 89999888 66661 1 2222334566
Q ss_pred eEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCCCCcEEECHHHHHHHhcC-CceEEEcceEEeecCCceeEE
Q psy16759 425 CVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMAS-GYDCKCRGQIFVKGKGTLTTY 503 (512)
Q Consensus 425 ~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I~vse~t~~~l~~~-~~~~~~rg~v~vKGkg~~~ty 503 (512)
+|||+|+|||+|||+|...|+|+.+|||||+||||||+|+ ++||+|+++++.|... +|.++.||.+.+||||.+.||
T Consensus 393 -iRig~~sg~~~agVvgl~mPRYclFgDtvn~AsrMes~G~-~~i~~s~~~~~~l~~~~~~~~e~rG~v~~kgkg~~~t~ 470 (484)
T KOG1023|consen 393 -LRIGFHSGPVVAGVVGLKMPRYCLFGDTVNTASRMESNGK-LMIHLSEEAKNLLTERPQFETEERGLVELKGKGVMSTY 470 (484)
T ss_pred -eeeccccCCceecccccCCCcccchhhHHHHHhhhhhcCC-eEEEecHHHHHHHHhcCceeeeccCcEEeecCceeeeE
Confidence 9999999999999999999999999999999999999999 9999999999999754 899999999999999999999
Q ss_pred EEecCCC
Q psy16759 504 FVKMPYE 510 (512)
Q Consensus 504 ~v~~~~~ 510 (512)
|+.+..+
T Consensus 471 wl~g~~~ 477 (484)
T KOG1023|consen 471 WLLGESS 477 (484)
T ss_pred EeccCcc
Confidence 9988654
No 6
>PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4.6.1.2 from EC) catalyse the formation of cyclic GMP (cGMP) from GTP. cGMP acts as an intracellular messenger, activating cGMP-dependent kinases and regulating cGMP-sensitive ion channels. The role of cGMP as a second messenger in vascular smooth muscle relaxation and retinal photo-transduction is well established. Guanylate cyclase is found both in the soluble and particulate fractions of eukaryotic cells. The soluble and plasma membrane-bound forms differ in structure, regulation and other properties [, , , ]. Most currently known plasma membrane-bound forms are receptors for small polypeptides. The soluble forms of guanylate cyclase are cytoplasmic heterodimers having alpha and beta subunits. In all characterised eukaryote guanylyl- and adenylyl cyclases, cyclic nucleotide synthesis is carried out by the conserved class III cyclase domain. ; GO: 0016849 phosphorus-oxygen lyase activity, 0009190 cyclic nucleotide biosynthetic process, 0035556 intracellular signal transduction; PDB: 3UVJ_A 1FX4_A 1WC4_B 2BW7_D 1WC1_A 1WC0_A 1WC3_A 1WC5_A 1WC6_A 3ET6_B ....
Probab=100.00 E-value=1.2e-35 Score=279.89 Aligned_cols=182 Identities=29% Similarity=0.516 Sum_probs=161.0
Q ss_pred cccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCC
Q psy16759 226 YHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQ 305 (512)
Q Consensus 226 ~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~ 305 (512)
|.|.+++|||||+||+|||++++.+ +|+++.++||+++..+++++.++ +++++|++||+|||+||.+.+..+
T Consensus 2 ~~~~~~~vtvlf~di~~ft~l~~~~----~~~~~~~~l~~~~~~~~~~v~~~---~g~~~~~~Gd~~~~~f~~~~~~~~- 73 (184)
T PF00211_consen 2 YSEQYRNVTVLFADIVGFTDLTEQL----DPEELVRLLNDFFSSLDRIVKQH---GGEIIKFIGDGVMAVFGLPEPDED- 73 (184)
T ss_dssp EEEEEEEEEEEEEEETTHHHHHHHS----HHHHHHHHHHHHHHHHHHHHHHT---TEEEEEEETTEEEEEESSSSCHCH-
T ss_pred CccccCeEEEEEEEecCcHHHHHhC----CchhHHHHHHHHHHHhhhccccc---cccccccccceeEEEecccccccc-
Confidence 5678899999999999999999985 69999999999999999999998 899999999999999999822211
Q ss_pred CCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhc
Q psy16759 306 PGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALN 385 (512)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~ 385 (512)
++..++ ++|++|.+ .+++
T Consensus 74 ----------------------------------------~~~~a~----~~al~~~~---------------~~~~--- 91 (184)
T PF00211_consen 74 ----------------------------------------AAERAV----QFALALLE---------------ALER--- 91 (184)
T ss_dssp ----------------------------------------HHHHHH----HHHHHHHH---------------HHHH---
T ss_pred ----------------------------------------cccccc----ccccchhh---------------cccc---
Confidence 444445 99999998 6766
Q ss_pred cccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCC
Q psy16759 386 ETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGV 465 (512)
Q Consensus 386 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~ 465 (512)
++.....++. +|||||+|||++|++|..+++||+||++||+|+||++.+.
T Consensus 92 ---------------~~~~~~~~~~---------------~rIGI~~G~v~~g~~G~~~~~~~v~G~~vn~Aarl~~~a~ 141 (184)
T PF00211_consen 92 ---------------LNKESGPPLS---------------VRIGIHTGPVVVGVVGSRRPEYDVFGDAVNIAARLESLAP 141 (184)
T ss_dssp ---------------HHHHHHSS-E---------------EEEEEEEEEEEEEEEESSSEEEEEESHHHHHHHHHHHTSS
T ss_pred ---------------cccccceeee---------------eeccccccccccccccCcccceeeeehhhhhhHHHHHhhc
Confidence 5555555666 9999999999999999779999999999999999999999
Q ss_pred CCcEEECHHHHHHHh-cCCceEEEcceEEeecCCceeEEEEec
Q psy16759 466 VGRLQVTEDTAKILM-ASGYDCKCRGQIFVKGKGTLTTYFVKM 507 (512)
Q Consensus 466 ~g~I~vse~t~~~l~-~~~~~~~~rg~v~vKGkg~~~ty~v~~ 507 (512)
+|+|+||+++++.|. ...|.++++|.+.+||++++.||+|.+
T Consensus 142 ~~~i~vs~~v~~~l~~~~~~~~~~~g~~~lkG~~~~~~y~~~~ 184 (184)
T PF00211_consen 142 PGQILVSEEVYDALNESDQFRFEELGRVELKGKGPVQTYQLNG 184 (184)
T ss_dssp TTSEEEEHHHHHHHTTHTTEEEEEEEEEEETTSSEEEEEEEE-
T ss_pred ccccccCHHHHHHhcccCceEEEEeeeEEEecCCCcEEEEEEC
Confidence 999999999999999 348999999999999999999999975
No 7
>KOG3619|consensus
Probab=100.00 E-value=2.4e-35 Score=329.05 Aligned_cols=259 Identities=27% Similarity=0.440 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhcCCCC-------Cc
Q psy16759 149 TTWFPILILIILFHILDRQMEFTARTDFLWQAKLKVEQDDVETMRGINKILLENILPAHVAQHFLHSSSSS-------RV 221 (512)
Q Consensus 149 ~~~~~i~~~~~~~~~~~r~~e~~~R~~f~~~~~~~~~~~~~~~~~~~~~~lL~~~lP~~V~~~ll~~~~~~-------~~ 221 (512)
+..+.++.+.++..+...++|...|..|+-+.+..+.+.+.+.++++.++||..+||+||+..+.++-.++ ..
T Consensus 22 an~~~~~~~nl~G~~~~~~~e~~~r~~f~~~~~~i~~r~~l~~~~~~qerlllsvlp~~va~~m~~~i~~~~~~~~~~~~ 101 (867)
T KOG3619|consen 22 ANAVLFLCINLVGIFTKYMMERAQRQAFLETRKCIEVRMELETEKQQQERLLLSVLPAHVAMEMKKDIIESSARCKNDNQ 101 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhcchhhhc
Confidence 33444555556666666789999999999999999999999999999999999999999999887653211 23
Q ss_pred cccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCC
Q psy16759 222 TQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPG 301 (512)
Q Consensus 222 ~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~ 301 (512)
.+.+|.+.|++|+++||||.|||.++++ .++++++++|||+|++||++..++ .+..||..||+|.+++|+|.+
T Consensus 102 f~~iy~~~h~nVSIl~adivgft~l~s~----~saqelv~~LneLf~rfd~lA~~~---~clRiKiLGdcyyCvsglp~~ 174 (867)
T KOG3619|consen 102 FHKLYIQRHDNVSILFADIVGFTQLASQ----CSAQELVKVLNELFARFDRLAAEN---HCLRIKILGDCYYCVSGLPEA 174 (867)
T ss_pred cchhheeeccchHhhHHHHhhhhhhhcC----CCHHHHHHHHHHHHHHHHHHHHhc---ceEeeeeecceeEEecCCCCC
Confidence 4679999999999999999999999988 499999999999999999999998 899999999999999999977
Q ss_pred CCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHH
Q psy16759 302 LEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLW 381 (512)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~ 381 (512)
++| |+..++ +++++|.+ +++
T Consensus 175 ~~d-----------------------------------------HA~~~v----~mgl~Mi~---------------aI~ 194 (867)
T KOG3619|consen 175 RPD-----------------------------------------HAVCCV----EMGLDMIK---------------AIK 194 (867)
T ss_pred Chh-----------------------------------------HHHHHH----HHHHHHHH---------------HHH
Confidence 766 556667 99999999 888
Q ss_pred HhhccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhcccc
Q psy16759 382 QALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMD 461 (512)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRme 461 (512)
+ ++...+.+++ ||||||+|+|.+||+|.+|.||||||++|-+|.+||
T Consensus 195 ~------------------vr~at~~dvn---------------mrvGihsG~Vl~GvlG~~kwq~DVws~dv~lAn~mE 241 (867)
T KOG3619|consen 195 Q------------------VREATGVDVN---------------MRVGIHSGSVLCGVLGLRKWQYDVWSNDVTLANHME 241 (867)
T ss_pred H------------------HHHHhCCCCc---------------eEEEEecCceeecccccceeeeeeccchhhhhhhhh
Confidence 8 7777888888 999999999999999999999999999999999999
Q ss_pred ccCCCCcEEECHHHHHHHhcCCceEEEcceE----EeecCCceeEEEEecCC
Q psy16759 462 SCGVVGRLQVTEDTAKILMASGYDCKCRGQI----FVKGKGTLTTYFVKMPY 509 (512)
Q Consensus 462 s~~~~g~I~vse~t~~~l~~~~~~~~~rg~v----~vKGkg~~~ty~v~~~~ 509 (512)
+.|.||+++||++|.+.|.. .|..++.-.. .+| +-.++||++..+.
T Consensus 242 s~G~pgrVhis~~Tl~~L~g-~yeve~g~g~~r~~~l~-~~~~~ty~i~~~~ 291 (867)
T KOG3619|consen 242 AGGVPGRVHISKATLDCLNG-EYEVEPGHGGERDPYLK-EHGIETYLIIPPS 291 (867)
T ss_pred hcCCCceeEechhHHHHhCC-CceeecCCCcccchHHH-hcCCceEEecccc
Confidence 99999999999999999998 6777654221 111 3368999998653
No 8
>smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain. Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes.
Probab=99.97 E-value=3.4e-30 Score=245.56 Aligned_cols=189 Identities=29% Similarity=0.468 Sum_probs=160.0
Q ss_pred HHHHHHHHHhccCCHHHHHHHHhcCCCCCccccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHH
Q psy16759 192 MRGINKILLENILPAHVAQHFLHSSSSSRVTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFD 271 (512)
Q Consensus 192 ~~~~~~~lL~~~lP~~V~~~ll~~~~~~~~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd 271 (512)
++++++.+|.+++|++|++++..+.. ....++++++||+|+||+|||.++++. .++++.++||+++..++
T Consensus 2 ~~~~~~~ll~~~lP~~v~~~l~~g~~------~~~~~~~~~~tvlf~di~g~t~l~~~~----~~~~~~~~l~~~~~~~~ 71 (194)
T smart00044 2 EKRKTDRLLDQLLPASVAESLKRGGS------PVPAESYDNVTILFTDIVGFTTLSSEA----TPEQVVTLLNDLYSRFD 71 (194)
T ss_pred hHHHHHHHHHHhCCHHHHHHHHhCCC------CccccccCeEEEEEeEhhhhhhhhhhC----CHHHHHHHHHHHHHHHH
Confidence 35566779999999999999998741 346677799999999999999999874 89999999999999999
Q ss_pred HHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhh
Q psy16759 272 KLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSG 351 (512)
Q Consensus 272 ~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (512)
+++.++ +++++|++||++||+||.+..... .++..++
T Consensus 72 ~~i~~~---gg~v~~~~Gd~~l~~F~~~~~~~~----------------------------------------~~a~~a~ 108 (194)
T smart00044 72 RIIDRH---GGYKVKTIGDAYMVVSGLPTEALV----------------------------------------DHAELAA 108 (194)
T ss_pred HHHHhc---CeEEEEEeCCEEEEEECCCCCcch----------------------------------------HHHHHHH
Confidence 999998 999999999999999998854420 1444455
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccCCCcchhhhhccccc-ccccccccCccccccccceeEEEEe
Q psy16759 352 NYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHSSNVSTVLFYRNRTS-EMDINMSLGVSDIFSSCLICVLTGL 430 (512)
Q Consensus 352 ~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~~~~~~lrIGI 430 (512)
++|+++.. .+.+ .+... ..+++ +||||
T Consensus 109 ----~~al~l~~---------------~~~~------------------~~~~~~~~~l~---------------~riGi 136 (194)
T smart00044 109 ----DEALDMVE---------------SLKT------------------VLSQHRGNGLR---------------VRIGI 136 (194)
T ss_pred ----HHHHHHHH---------------HHHH------------------HHhhccCCCee---------------EEEEE
Confidence 88999888 6666 33321 33455 99999
Q ss_pred eeccEEEeeeCCCCCCceEeCchHHHhccccccCCCCcEEECHHHHHHHhcCCce
Q psy16759 431 NHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMASGYD 485 (512)
Q Consensus 431 ~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I~vse~t~~~l~~~~~~ 485 (512)
|+|+|++|.+|..+++||+||++||.|+||++.+.+|+|++|+++++.|++.++.
T Consensus 137 h~G~v~~~~~g~~~~~~~~~G~~vn~AarL~~~a~~g~i~vs~~~~~~l~~~~~~ 191 (194)
T smart00044 137 HTGPVVAGVVGITMPRYCLFGDTVNLASRMESVGDPGQILVSEETYSLLRRRGPR 191 (194)
T ss_pred eccceEEEecCCCCceeEEeChHHHHHHHHHhcCCCCeEEECHHHHHHHHhhCCC
Confidence 9999999999999889999999999999999999999999999999999764443
No 9
>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-28 Score=239.08 Aligned_cols=195 Identities=21% Similarity=0.268 Sum_probs=155.7
Q ss_pred HHHHhccCCHHHHHHHHhcCCCCCccccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcc
Q psy16759 197 KILLENILPAHVAQHFLHSSSSSRVTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLK 276 (512)
Q Consensus 197 ~~lL~~~lP~~V~~~ll~~~~~~~~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~ 276 (512)
+..+.++++..+.+.+.... ... +.+||||+||+|||++++.. +|.++.++||+++..+++++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~--------~~~---~~vtilfaDi~g~T~l~~~~----~~~~~~~ll~~~~~~~~~~v~~ 86 (227)
T COG2114 22 DLVLRLYLARVVGRLLARGG--------AGD---RRVTLLFADIVGSTELSESL----GDEALVELLNLYFDAVAEVVAR 86 (227)
T ss_pred hHHHHHHhhhccchhhcccc--------ccC---ceEEEEEEeeccchHHhhhC----CHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777666665441 111 68999999999999999985 8999999999999999999999
Q ss_pred cCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHH
Q psy16759 277 PKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLR 356 (512)
Q Consensus 277 ~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (512)
| ++.++|++||++||+||.|.+.+ ++..++ .+
T Consensus 87 ~---gG~v~k~iGD~~la~F~~p~~~~------------------------------------------~A~~~a---~~ 118 (227)
T COG2114 87 H---GGRVVKFIGDGFLAVFGRPSPLE------------------------------------------DAVACA---LD 118 (227)
T ss_pred c---CCEEEEEecceEEEEeCCCCCcH------------------------------------------HHHHHH---HH
Confidence 8 99999999999999999995543 111111 02
Q ss_pred HHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEE
Q psy16759 357 IGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVI 436 (512)
Q Consensus 357 ~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~Vv 436 (512)
.+++|.+ ..++ .+... ++ +|||||+|+|+
T Consensus 119 ~~~~~~~---------------~~~~------------------~~~~~---l~---------------~riGi~~G~vv 147 (227)
T COG2114 119 LQLALRN---------------PLAR------------------LRRES---LR---------------VRIGIHTGEVV 147 (227)
T ss_pred HHHHHHH---------------HHhh------------------ccCcC---ee---------------EEEEEEeecEE
Confidence 3444444 3433 22222 56 99999999999
Q ss_pred EeeeCCCCCCceEeCchHHHhccccccCCCCcEEECHHHHHHHhcCCceEEEcceEEeecC-CceeEEEEecCC
Q psy16759 437 AGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMASGYDCKCRGQIFVKGK-GTLTTYFVKMPY 509 (512)
Q Consensus 437 aGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I~vse~t~~~l~~~~~~~~~rg~v~vKGk-g~~~ty~v~~~~ 509 (512)
+|.+|. ||+||++||+|||||+.++||.|.+|++|++.+.+....+...|...+||+ +.+..|.+....
T Consensus 148 ~~~~g~----~~~~G~~VN~AaRLe~~a~~g~i~iS~~~~~~~~~~~~~~~~~g~~~lkg~~~~~~v~~~~~~~ 217 (227)
T COG2114 148 VGNTGG----YTVVGSAVNQAARLESLAKPGQVLLSEATYDLVRDLVDLFSGLGSHRLKGLARPVRVYQLCHRS 217 (227)
T ss_pred EEeecC----eeEechHhHHHHHHHHhcCCCeEEEcHHHHHHHhhhhhhhhcCCceecCCCCCceEEEEecccc
Confidence 999998 999999999999999999999999999999999832577888999999996 577888887653
No 10
>cd07302 CHD cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.
Probab=99.95 E-value=1.7e-27 Score=219.74 Aligned_cols=174 Identities=29% Similarity=0.483 Sum_probs=153.1
Q ss_pred eEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCcc
Q psy16759 232 CIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNV 311 (512)
Q Consensus 232 ~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~ 311 (512)
++||+|+||+||+.+.+.+ +++++.+++|.++..+++++.++ +++++|+.||++|++||.+.+.++
T Consensus 1 ~~~il~~di~~~t~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~---~g~~~~~~gd~~~~~f~~~~~~~~------- 66 (177)
T cd07302 1 EVTVLFADIVGFTALSERL----GPEELVELLNEYFSAFDEIIERH---GGTVDKTIGDAVMAVFGLPGAHED------- 66 (177)
T ss_pred CEEEEEEEccChHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHc---CCEEEEEeCceEEEEeCCCCCchh-------
Confidence 4899999999999999874 88999999999999999999997 999999999999999999865333
Q ss_pred ccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccC
Q psy16759 312 FHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHS 391 (512)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 391 (512)
++..++ ++|++|++ .+++
T Consensus 67 ----------------------------------~~~~A~----~~a~~i~~---------------~~~~--------- 84 (177)
T cd07302 67 ----------------------------------HAERAV----RAALEMQE---------------ALAE--------- 84 (177)
T ss_pred ----------------------------------HHHHHH----HHHHHHHH---------------HHHH---------
Confidence 333344 99999998 7777
Q ss_pred CCcchhhhhcccc--cccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCCCCcE
Q psy16759 392 SNVSTVLFYRNRT--SEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRL 469 (512)
Q Consensus 392 ~~~~~~~~~~n~~--~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I 469 (512)
.+.. ....+. +|||||+|++++|.+|..+++|++||++||+|+||++.+.+|+|
T Consensus 85 ---------~~~~~~~~~~~~---------------~riGi~~G~~~~g~~g~~~~~~~~~G~~v~~A~rl~~~a~~~~i 140 (177)
T cd07302 85 ---------LNAEREGGPPLR---------------LRIGIHTGPVVAGVVGSERPEYTVIGDTVNLAARLESLAKPGQI 140 (177)
T ss_pred ---------HhhcccCCCCeE---------------EEEEEecceEEEEecCCCCcceeEecchHhHHHHHHhcCCCCEE
Confidence 4433 233455 99999999999999999999999999999999999999999999
Q ss_pred EECHHHHHHHhcCCceEEEcceEEeecC-CceeEEEE
Q psy16759 470 QVTEDTAKILMASGYDCKCRGQIFVKGK-GTLTTYFV 505 (512)
Q Consensus 470 ~vse~t~~~l~~~~~~~~~rg~v~vKGk-g~~~ty~v 505 (512)
++|+++++.+....+.+.+.|.+.+||. +.+++|.+
T Consensus 141 ~vs~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~y~~ 177 (177)
T cd07302 141 LVSEATYELLGDAGFEFEELGEVELKGKSGPVRVYRL 177 (177)
T ss_pred EECHHHHHhhccCceEEEEeCCEEecCCCCceEEEEC
Confidence 9999999999865799999999999997 78888864
No 11
>cd07556 Nucleotidyl_cyc_III Class III nucleotidyl cyclases. Class III nucleotidyl cyclases are the largest, most diverse group of nucleotidyl cyclases (NC's) containing prokaryotic and eukaryotic proteins. They can be divided into two major groups; the mononucleotidyl cyclases (MNC's) and the diguanylate cyclases (DGC's). The MNC's, which include the adenylate cyclases (AC's) and the guanylate cyclases (GC's), have a conserved cyclase homology domain (CHD), while the DGC's have a conserved GGDEF domain, named after a conserved motif within this subgroup. Their products, cyclic guanylyl and adenylyl nucleotides, are second messengers that play important roles in eukaryotic signal transduction and prokaryotic sensory pathways.
Probab=98.98 E-value=1e-08 Score=89.86 Aligned_cols=131 Identities=34% Similarity=0.561 Sum_probs=101.4
Q ss_pred EEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCccc
Q psy16759 233 IGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNVF 312 (512)
Q Consensus 233 VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~~ 312 (512)
+++++.||.+|+.+.+.. .....-++|.++...+.+.+..+ +....++-||.+++++... +
T Consensus 2 ~~ll~i~i~~~~~i~~~~----g~~~~~~~l~~~~~~l~~~~~~~---~~~~~r~~~d~f~~l~~~~----~-------- 62 (133)
T cd07556 2 VTILFADIVGFTSLADAL----GPDEGDELLNELAGRFDSLIRRS---GDLKIKTIGDEFMVVSGLD----H-------- 62 (133)
T ss_pred EEEEEEEchhhHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHc---CcEEEEeecceEEEEECch----H--------
Confidence 789999999999998875 66677788899999999988875 5678889999999997531 1
Q ss_pred cccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccCC
Q psy16759 313 HLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHSS 392 (512)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 392 (512)
...+. +.+.++.+ .+.+
T Consensus 63 ----------------------------------~~~~~----~~~~~i~~---------------~~~~---------- 79 (133)
T cd07556 63 ----------------------------------PAAAV----AFAEDMRE---------------AVSA---------- 79 (133)
T ss_pred ----------------------------------HHHHH----HHHHHHHH---------------HHHH----------
Confidence 11122 55666665 4444
Q ss_pred CcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCCCCcE
Q psy16759 393 NVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRL 469 (512)
Q Consensus 393 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I 469 (512)
.+........ ++||++.|++..+..|. ++.++.+|+.+|.|+++.+.+++|+|
T Consensus 80 --------~~~~~~~~~~---------------~~ig~~~g~~~~~~~~~-~~~~~~~~~~~~~a~~a~~~a~~~~i 132 (133)
T cd07556 80 --------LNQSEGNPVR---------------VRIGIHTGPVVVGVIGS-RPQYDVWGALVNLASRMESQAKAGQV 132 (133)
T ss_pred --------HHhccCCceE---------------EEEEEecccEEEEeccC-CccceEEcHHHHHHHHHHhcCCCCCc
Confidence 2211222344 99999999999999999 99999999999999999999988876
No 12
>PF06327 DUF1053: Domain of Unknown Function (DUF1053); InterPro: IPR009398 Cyclic AMP (cAMP) is a ubiquitous signalling molecule which mediates many cellular processes by activating cAMP-dependent kinases and also inducing protein-protein interactions. This molecule is produced by the adenylate cyclase (AC) enzyme, using ATP as its substrate. Mammalian adenylate cyclase has nine closely related membrane-bound isoforms (AC1-9) showing significant sequence homology and sharing the same overall structure: two hydrophobic transmembrane domains, and two cytoplasmic domains that are responsible for the catalytic activity. These isoforms differ in both their tissue specificity and their regulation. Regulatory factors known to influence one or more of these isoforms include G proteins, protein kinases, calcium and calmodulin. For more information see [, ]. This entry represents a region of unknown function found in many of these isoforms. It is part of the N-terminal cytoplasmic domain but its presence is not necessary for catalytic activity []. ; GO: 0004016 adenylate cyclase activity, 0009190 cyclic nucleotide biosynthetic process, 0016021 integral to membrane
Probab=97.39 E-value=5e-05 Score=65.64 Aligned_cols=29 Identities=31% Similarity=0.603 Sum_probs=27.9
Q ss_pred CCCCcccEEEEecCchhhcccccCCccch
Q psy16759 8 NTDDLNPVFLWFKDGAHELGFRHFPDPQY 36 (512)
Q Consensus 8 ~~~~i~~ftL~Fkd~~LE~kY~~~~D~~f 36 (512)
+++|+++|+|+|+|+++|+||++.+|++|
T Consensus 73 rse~~~~~tL~F~d~~lE~kY~~~~d~~F 101 (101)
T PF06327_consen 73 RSEHINRFTLRFKDKSLEKKYRQMRDPMF 101 (101)
T ss_pred hhhhcceeeEEECChHHHHHHHhccccCC
Confidence 58999999999999999999999999997
No 13
>PF07701 HNOBA: Heme NO binding associated; InterPro: IPR011645 The HNOBA (Haem NO Binding) domain is found associated with the HNOB domain and IPR001054 from INTERPRO in soluble cyclases and signalling proteins. The HNOB domain is predicted to function as a haem-dependent sensor for gaseous ligands, and transduce diverse downstream signals in both bacteria and animals.; GO: 0004383 guanylate cyclase activity, 0006182 cGMP biosynthetic process; PDB: 2P04_B 2P08_A 3HLS_E.
Probab=94.45 E-value=0.17 Score=50.02 Aligned_cols=47 Identities=19% Similarity=0.291 Sum_probs=38.8
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Q psy16759 166 RQMEFTARTDFLWQAKLKVEQDDVETMRGINKILLENILPAHVAQHF 212 (512)
Q Consensus 166 r~~e~~~R~~f~~~~~~~~~~~~~~~~~~~~~~lL~~~lP~~V~~~l 212 (512)
-+.+...+++--...++++..++++++|++.+.||++++|+.||++|
T Consensus 173 a~~~l~~~le~~~~~~Le~~~~~l~~ek~ktd~LL~~mlP~~VA~~L 219 (219)
T PF07701_consen 173 AELKLAKQLEQEKSAELEESMRELEEEKKKTDELLYSMLPPSVADRL 219 (219)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhhC
Confidence 35566666666678889999999999999999999999999999986
No 14
>PRK10245 adrA diguanylate cyclase AdrA; Provisional
Probab=93.20 E-value=13 Score=39.30 Aligned_cols=58 Identities=16% Similarity=0.105 Sum_probs=35.4
Q ss_pred ceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEe
Q psy16759 231 NCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLAS 296 (512)
Q Consensus 231 ~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~ 296 (512)
++.++++.||.+|+++.+.... ..+.++++.+. ..+.+.+.. +...-++-||.++...
T Consensus 235 ~~~~ll~idId~Fk~INd~~Gh-~~GD~lL~~vA---~~L~~~l~~----~d~laRlggdeFavll 292 (366)
T PRK10245 235 RDATLLIIDIDHFKSINDTWGH-DVGDEAIVALT---RQLQITLRG----SDVIGRFGGDEFAVIM 292 (366)
T ss_pred CCEEEEEEECCcchHHHHhhCc-hHHHHHHHHHH---HHHHHhCCC----CCEEEEEcCcEEEEEe
Confidence 4688999999999999887522 23444444333 333344433 2233356688887765
No 15
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=83.70 E-value=83 Score=35.68 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=38.6
Q ss_pred EEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHh-cccCCCCeEEEeEecceEEEEeC
Q psy16759 235 VMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLL-LKPKFSSIEKIKTIGSTYMLASG 297 (512)
Q Consensus 235 VmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li-~~~~~~~~~kiK~iGd~ymaa~G 297 (512)
+....+-||+++.+.+ +++-...+|.+.+.|=.-. .+| ++.-=++.+|-|++++.
T Consensus 177 l~~i~vDNyDe~t~~~-----~d~~rs~inS~V~s~l~~~a~~~---~if~rr~s~drf~~~~~ 232 (655)
T COG3887 177 LGIISVDNYDEVTQGL-----SDSDRSQINSFVTSFLEEWATEY---NIFLRRYSSDRFYAFTN 232 (655)
T ss_pred EEEEEeccHHHHhcCC-----ChhhHHHHHHHHHHHHHHHHHHh---hhhheeecCCeEEEEec
Confidence 4445566999998874 4455667777777665444 344 77777899999999875
No 16
>COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]
Probab=65.70 E-value=69 Score=35.03 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=25.4
Q ss_pred ceEEEEEEecCchhhhhhhcccccChHHHHHHHHHH
Q psy16759 231 NCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEI 266 (512)
Q Consensus 231 ~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~ 266 (512)
...++++.||-+|..+-++. .+.-+.+|++.+-..
T Consensus 300 ~pls~~m~DID~FK~iNDt~-GH~~GDevLr~vA~~ 334 (435)
T COG3706 300 RPLSLLMLDIDDFKEINDTY-GHDVGDEVLRQVARR 334 (435)
T ss_pred CCeeEEEEeccccccccccc-CCccHHHHHHHHHHH
Confidence 46999999999999988764 333566666655433
No 17
>PF05165 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohydrolase III catalyses the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. The enzyme also has an independent pyrophosphate phosphohydrolase activity. The proteins are 200-270 amino acids in length.; GO: 0003933 GTP cyclohydrolase activity, 0009058 biosynthetic process; PDB: 2QV6_B.
Probab=65.54 E-value=54 Score=33.09 Aligned_cols=60 Identities=13% Similarity=0.136 Sum_probs=44.0
Q ss_pred ceEEEEEEecCchh-hhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeC
Q psy16759 231 NCIGVMFASIPNYK-EFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASG 297 (512)
Q Consensus 231 ~~VtVmFadI~~Ft-~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~G 297 (512)
+.|+|+--||.|+| .++++. .|-+..-..++++..+.+.+.++ |+----.=||=+|++|.
T Consensus 126 ~~v~iAH~DI~d~T~~~Td~~----~~ydt~~~I~~l~~~l~~~~~~~---G~L~fylGGDNi~~v~p 186 (246)
T PF05165_consen 126 GYVQIAHFDINDSTGTYTDEE----SPYDTYLEIEDLYAKLMKYLEKY---GSLAFYLGGDNIMAVCP 186 (246)
T ss_dssp --EEEEEEEETTHHHHTTTTS-----HHHHHHHHHHHHHHHHHHHHTT---T---EEEETTEEEEE-T
T ss_pred CceEEEEEeeeccchhhhccc----ChHHHHHHHHHHHHHHHHHHHhc---CCEEEEecCceEEEECC
Confidence 57999999999999 777764 88888888888888888888776 55444556899999883
No 18
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=58.04 E-value=2.6e+02 Score=33.14 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHhcCCCCCccccccccccceEEEEEEecCchh
Q psy16759 190 ETMRGINKILLENILPAHVAQHFLHSSSSSRVTQDLYHERYNCIGVMFASIPNYK 244 (512)
Q Consensus 190 ~~~~~~~~~lL~~~lP~~V~~~ll~~~~~~~~~~~l~~~~~~~VtVmFadI~~Ft 244 (512)
+..=+-++.|....-+..|+......- ..++. ..++++..+=.+-.
T Consensus 510 ~~Lye~s~~L~~a~t~~~vl~~~~~qi------~~~~~---~~v~i~l~~~~~~~ 555 (890)
T COG2205 510 ELLYEFSKKLAGARTREDILAAAGQQI------ASLLN---QRVVILLPDDNGKL 555 (890)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHH------HHHhC---CceEEEEecCCccc
Confidence 333444555666666666665443321 11222 34777777655443
No 19
>COG2429 Archaeal GTP cyclohydrolase III [Nucleotide transport and metabolism]
Probab=53.29 E-value=86 Score=31.35 Aligned_cols=62 Identities=8% Similarity=0.037 Sum_probs=50.5
Q ss_pred ceEEEEEEecCchh-hhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCC
Q psy16759 231 NCIGVMFASIPNYK-EFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLR 299 (512)
Q Consensus 231 ~~VtVmFadI~~Ft-~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~ 299 (512)
.-|++.--||.+-| ++++.. +|.......+..+..+++-++++ |.----.=||-+||+|...
T Consensus 130 g~v~IAH~Dvn~~Tgt~Td~~----~~~~t~~~I~~~~~~L~~~l~k~---gal~fflGGDN~ma~~p~~ 192 (250)
T COG2429 130 GYVQIAHFDVNDATGTYTDIV----SPYDTYTEIQRVYATLMRFLEKI---GALLFFLGGDNIMAVCPGL 192 (250)
T ss_pred CceEEEEEeeecchhhhhccc----chhHHHHHHHHHHHHHHHHHHhc---CcEEEEecCcceEEECCCC
Confidence 46899999999999 777774 88899999999999999999987 4444334479999988643
No 20
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=49.38 E-value=5.6 Score=40.74 Aligned_cols=13 Identities=38% Similarity=0.659 Sum_probs=0.0
Q ss_pred hhHHHHHHhhHHH
Q psy16759 166 RQMEFTARTDFLW 178 (512)
Q Consensus 166 r~~e~~~R~~f~~ 178 (512)
||.=++.-.+-+|
T Consensus 160 ~qaWfT~L~dL~W 172 (381)
T PF05297_consen 160 HQAWFTILVDLYW 172 (381)
T ss_dssp -------------
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444333
No 21
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=48.60 E-value=2.4e+02 Score=32.79 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHhccCCHH
Q psy16759 184 VEQDDVETMRGINKILLENILPAH 207 (512)
Q Consensus 184 ~~~~~~~~~~~~~~~lL~~~lP~~ 207 (512)
.+|.++..++...-.||..-||+.
T Consensus 181 r~q~~v~~~n~~~~~~l~~~lp~~ 204 (697)
T PF09726_consen 181 RKQREVQKENEFYMQLLQQALPPE 204 (697)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 456667777888888999999998
No 22
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=46.51 E-value=2.3e+02 Score=31.10 Aligned_cols=36 Identities=0% Similarity=0.065 Sum_probs=18.6
Q ss_pred cEEEEecCchhhcccccCCccchhhHHHH----HHHHHHHhhh
Q psy16759 14 PVFLWFKDGAHELGFRHFPDPQYRFYVSL----TVGLLVIVTT 52 (512)
Q Consensus 14 ~ftL~Fkd~~LE~kY~~~~D~~fk~yl~c----~v~I~iIQ~L 52 (512)
.|...|-+|.=+ | ++-++..||-++. |+.+++.+++
T Consensus 279 ~~gV~l~~Pvd~--Y-~~~~Ra~KYgiLFI~LTF~~fflfE~~ 318 (430)
T PF06123_consen 279 AFGVDLIEPVDH--Y-QKSERAVKYGILFIGLTFLAFFLFELL 318 (430)
T ss_pred ceeEEEeccccH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554322 2 2445566777766 3335666665
No 23
>PRK10490 sensor protein KdpD; Provisional
Probab=45.00 E-value=2.6e+02 Score=33.46 Aligned_cols=20 Identities=20% Similarity=0.351 Sum_probs=9.0
Q ss_pred HHHHHHHHHhccCCHHHHHH
Q psy16759 192 MRGINKILLENILPAHVAQH 211 (512)
Q Consensus 192 ~~~~~~~lL~~~lP~~V~~~ 211 (512)
..+..+.|....=+..+++.
T Consensus 515 L~els~~L~~a~~~~~i~~~ 534 (895)
T PRK10490 515 LYEMSKALAVGLSPEDIAAT 534 (895)
T ss_pred HHHHHHHHHhCCCHHHHHHH
Confidence 33344445544445444433
No 24
>PRK11715 inner membrane protein; Provisional
Probab=40.07 E-value=2.6e+02 Score=30.73 Aligned_cols=37 Identities=3% Similarity=0.100 Sum_probs=19.3
Q ss_pred ccEEEEecCchhhcccccCCccchhhHHHH----HHHHHHHhhh
Q psy16759 13 NPVFLWFKDGAHELGFRHFPDPQYRFYVSL----TVGLLVIVTT 52 (512)
Q Consensus 13 ~~ftL~Fkd~~LE~kY~~~~D~~fk~yl~c----~v~I~iIQ~L 52 (512)
..|...|-+|.=. | ++-|+..||-++. |+.+++.+++
T Consensus 284 ~~~~V~~~~PVd~--Y-~~~~RA~KYgiLFI~LTF~~fFlfE~~ 324 (436)
T PRK11715 284 PAFGVSLIDPVDQ--Y-QKTERAVKYAILFIALTFAAFFLFELL 324 (436)
T ss_pred ceeEEEEeccccH--H-HHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 4455555554322 2 2445566777666 3335666665
No 25
>PRK15426 putative diguanylate cyclase YedQ; Provisional
Probab=38.37 E-value=5.7e+02 Score=28.05 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=34.6
Q ss_pred ceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEe
Q psy16759 231 NCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLAS 296 (512)
Q Consensus 231 ~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~ 296 (512)
...++++.||.+|..+-+.... ..+.++++.+.+. +-..+.. +...-..=||.++.+.
T Consensus 428 ~~~~l~~idid~fk~iNd~~G~-~~GD~~L~~~a~~---l~~~~~~----~~~~~R~ggdeF~ill 485 (570)
T PRK15426 428 QPFSVIQLDLDHFKSINDRFGH-QAGDRVLSHAAGL---ISSSLRA----QDVAGRVGGEEFCVVL 485 (570)
T ss_pred CcEEEEEEECcccCHhhHhhCh-HHHHHHHHHHHHH---HHHhCCC----CCEEEeecCcEEEEEe
Confidence 4588999999999999887522 2344444433333 3334432 2223356678887654
No 26
>PF13974 YebO: YebO-like protein
Probab=37.26 E-value=1.1e+02 Score=25.62 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=19.8
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Q psy16759 173 RTDFLWQAKLKVEQDDVETMRGINKILLENILPAHV 208 (512)
Q Consensus 173 R~~f~~~~~~~~~~~~~~~~~~~~~~lL~~~lP~~V 208 (512)
|..-....|++--++-+++.|++|. ||.++.|+..
T Consensus 20 RaSvRANEQI~LL~~ileqQKrQn~-LL~rL~~~~~ 54 (80)
T PF13974_consen 20 RASVRANEQIELLEEILEQQKRQNA-LLRRLCEANE 54 (80)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHH-HHHHHhcccc
Confidence 3333344555555555666666655 7776666554
No 27
>PRK11677 hypothetical protein; Provisional
Probab=29.44 E-value=2.5e+02 Score=25.73 Aligned_cols=44 Identities=18% Similarity=0.145 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy16759 152 FPILILIILFHILDRQMEFTARTDFLWQAKLKVEQDDVETMRGI 195 (512)
Q Consensus 152 ~~i~~~~~~~~~~~r~~e~~~R~~f~~~~~~~~~~~~~~~~~~~ 195 (512)
+.+++-+++.++..|..-...|..--.+.++++.+.+++..|+.
T Consensus 8 i~livG~iiG~~~~R~~~~~~~~q~~le~eLe~~k~ele~Ykqe 51 (134)
T PRK11677 8 IGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYRQE 51 (134)
T ss_pred HHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555654444344444455666666666655553
No 28
>PRK02240 GTP cyclohydrolase III; Provisional
Probab=29.24 E-value=1.3e+02 Score=30.54 Aligned_cols=60 Identities=10% Similarity=0.151 Sum_probs=41.1
Q ss_pred ceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcc-cCCCCeEEEeEecceEEEEe
Q psy16759 231 NCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLK-PKFSSIEKIKTIGSTYMLAS 296 (512)
Q Consensus 231 ~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~-~~~~~~~kiK~iGd~ymaa~ 296 (512)
..|+|+--||.++|..+.. +.+|-+..-..++.+..+-+.+.+ + +.----.=||-+|++|
T Consensus 133 ~~v~iaH~Di~~~T~~~td---~~~~~dt~~~i~~~~~~l~~~~~~~~---g~l~ff~GGDN~~~~~ 193 (254)
T PRK02240 133 GYVQIAHFDINDITGTYTD---IENAFDTFLEIEQAYLALMRELRKAH---DALSFFVGGDNFMAPC 193 (254)
T ss_pred CceEEEEEeeecccceeec---cCchhHHHHHHHHHHHHHHHHHHHhc---CcEEEEecCceEEEEC
Confidence 5799999999999986542 125556655666666666666665 5 4433334489999998
No 29
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=25.74 E-value=23 Score=36.45 Aligned_cols=8 Identities=13% Similarity=0.297 Sum_probs=0.0
Q ss_pred HHHHHHHH
Q psy16759 95 ESSILTVA 102 (512)
Q Consensus 95 ~~~~l~~~ 102 (512)
+++++.+.
T Consensus 114 l~~lLaL~ 121 (381)
T PF05297_consen 114 LCCLLALG 121 (381)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 33333333
No 30
>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]
Probab=25.44 E-value=67 Score=28.86 Aligned_cols=76 Identities=24% Similarity=0.290 Sum_probs=49.8
Q ss_pred ccEEEeeeCCC---CCCceEeCchHHHhcccc----ccCCCCc----------EEECH---HHHHHHhcCCceEEEcceE
Q psy16759 433 GPVIAGVIGAQ---KPQYDIWSNTVNVASRMD----SCGVVGR----------LQVTE---DTAKILMASGYDCKCRGQI 492 (512)
Q Consensus 433 G~VvaGviG~~---k~~Ydi~GdtVN~AsRme----s~~~~g~----------I~vse---~t~~~l~~~~~~~~~rg~v 492 (512)
|.|.+.-.|.+ -..+|.+|.-|-+--+.+ ++|+.+. +.--| +.++.|...|..+..+..+
T Consensus 23 gevlG~~~GRstd~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl~~edW~alaerlea~gi~~~i~P~v 102 (138)
T COG3565 23 GEVLGCKEGRSTDTWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVLPVEDWFALAERLEAAGIPFHIPPKV 102 (138)
T ss_pred hhhcccccccccceEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEEEHHHHHHHHHHHHHcCCCcccCceE
Confidence 44554445543 267999999887655554 2333332 33333 3345566678999999999
Q ss_pred Eeec-CCceeEEEEecC
Q psy16759 493 FVKG-KGTLTTYFVKMP 508 (512)
Q Consensus 493 ~vKG-kg~~~ty~v~~~ 508 (512)
..|| .|+..|.|+-.+
T Consensus 103 RF~Ge~gEq~TlFl~DP 119 (138)
T COG3565 103 RFKGEPGEQRTLFLFDP 119 (138)
T ss_pred EecCCccceEEEEEECC
Confidence 9999 679999988654
No 31
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=23.05 E-value=6.8e+02 Score=24.08 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCChhhhHHH
Q psy16759 116 LVSMVCVVLLHFVVYSVQNLFFPYRYDDLPYQLTT 150 (512)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (512)
+.++++..++.++++.........-.+.+++....
T Consensus 150 ~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~i 184 (206)
T PF06570_consen 150 ILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYI 184 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHH
Confidence 33344444444444333333222223444443333
No 32
>PF06305 DUF1049: Protein of unknown function (DUF1049); InterPro: IPR010445 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=21.85 E-value=3.8e+02 Score=20.67 Aligned_cols=20 Identities=0% Similarity=0.152 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy16759 178 WQAKLKVEQDDVETMRGINK 197 (512)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~ 197 (512)
++.++++.++++++.+++++
T Consensus 46 ~r~~~~~~~k~l~~le~e~~ 65 (68)
T PF06305_consen 46 LRRRIRRLRKELKKLEKELE 65 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45555555566655555544
Done!