Query psy16759
Match_columns 512
No_of_seqs 307 out of 1922
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 21:17:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16759.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16759hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ab8_A Adenylyl cyclase; lyase 100.0 3.1E-43 1.1E-47 342.1 15.0 208 220-510 2-210 (220)
2 3et6_A Soluble guanylyl cyclas 100.0 2.7E-39 9.4E-44 306.1 17.3 185 227-510 4-189 (190)
3 3uvj_A Guanylate cyclase solub 100.0 5.8E-39 2E-43 313.0 16.4 188 220-507 2-194 (225)
4 1azs_A VC1; complex (lyase/hyd 100.0 3.2E-39 1.1E-43 314.6 13.6 188 221-510 23-214 (220)
5 2wz1_A Guanylate cyclase solub 100.0 3.1E-38 1.1E-42 307.0 18.9 192 224-509 4-201 (219)
6 1yk9_A Adenylate cyclase; beta 100.0 1.2E-39 4.1E-44 313.4 6.9 186 224-510 2-187 (204)
7 1y10_A Hypothetical protein RV 100.0 1.1E-36 3.6E-41 321.0 20.2 203 189-510 160-379 (407)
8 2w01_A Adenylate cyclase; guan 100.0 3.8E-36 1.3E-40 289.3 19.6 183 227-510 9-197 (208)
9 3r5g_A CYAB; adenylyl cyclase, 100.0 1.8E-36 6E-41 288.3 16.3 186 228-512 5-197 (198)
10 1wc3_A Adenylate cyclase; solu 100.0 8.2E-36 2.8E-40 289.6 13.0 191 228-509 23-216 (219)
11 1fx2_A Receptor-type adenylate 100.0 6.9E-35 2.4E-39 284.9 17.3 194 224-508 4-219 (235)
12 1ybt_A Hydrolase, alpha/beta h 100.0 1.5E-34 5E-39 273.8 15.6 173 221-509 6-179 (184)
13 3mr7_A Adenylate/guanylate cyc 100.0 7.3E-32 2.5E-36 255.3 17.2 166 229-509 4-174 (189)
14 3hls_A Guanylate cyclase solub 96.5 0.014 4.7E-07 45.7 8.7 49 166-215 18-66 (66)
15 3qyy_A Response regulator; C-D 39.4 1.7E+02 0.006 24.6 9.8 58 231-296 41-98 (167)
16 3i5c_A Fusion of general contr 31.4 2.6E+02 0.0089 24.3 11.9 58 231-296 60-118 (206)
17 3icl_A EAL/ggdef domain protei 30.4 2.4E+02 0.0083 23.7 10.5 58 231-296 29-86 (171)
18 2qv6_A MJ0145, GTP cyclohydrol 30.0 1.2E+02 0.0041 29.7 7.4 62 230-297 129-190 (268)
19 3ezu_A Ggdef domain protein; m 20.1 6.1E+02 0.021 24.7 13.1 58 231-296 212-269 (342)
No 1
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=100.00 E-value=3.1e-43 Score=342.12 Aligned_cols=208 Identities=57% Similarity=0.896 Sum_probs=157.1
Q ss_pred CccccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCC
Q psy16759 220 RVTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLR 299 (512)
Q Consensus 220 ~~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~ 299 (512)
|.+.+++++++++|||||+||+|||.++++++.+.+|++++++||++|..||+++.+|+|++++|+|++||+|||+||+|
T Consensus 2 ~~~~~~~~~~~~~vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~~~~g~~~ik~iGD~~ma~fg~p 81 (220)
T 1ab8_A 2 LKNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLS 81 (220)
T ss_dssp -----CCEEEEEEEEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEECCC
T ss_pred CCCCcccccccCcEEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEeCceEEEEECCC
Confidence 45678999999999999999999999999876656789999999999999999999986679999999999999999998
Q ss_pred CCCCC-CCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHH
Q psy16759 300 PGLED-QPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVE 378 (512)
Q Consensus 300 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~ 378 (512)
..... +... ....+.|+..++ ++|++|++
T Consensus 82 ~~~~~~~~~~-------------------------------~~~~~~~a~~a~----~~Al~~~~--------------- 111 (220)
T 1ab8_A 82 AIPSQEHAQE-------------------------------PERQYMHIGTMV----EFAYALVG--------------- 111 (220)
T ss_dssp CSCCC---------------------------------------CCHHHHHHH----HHHHHHHH---------------
T ss_pred cccccccccc-------------------------------ccccHHHHHHHH----HHHHHHHH---------------
Confidence 63221 1100 001122555555 99999999
Q ss_pred HHHHhhccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhc
Q psy16759 379 VLWQALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVAS 458 (512)
Q Consensus 379 ~l~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~As 458 (512)
.+++ +|.....++. +|||||+|||++|++|.+|++||+|||+||+||
T Consensus 112 ~l~~------------------~~~~~~~~l~---------------~rIGIh~G~v~~G~iG~~r~~y~v~Gd~VN~Aa 158 (220)
T 1ab8_A 112 KLDA------------------INKHSFNDFK---------------LRVGINHGPVIAGVIGAQKPQYDIWGNTVNVAS 158 (220)
T ss_dssp HHHH------------------HHTTTTCCCC---------------CEEEEEEEEEEEEEECSSSCEEEEESHHHHHHH
T ss_pred HHHH------------------HhhccCCceE---------------EEEEEEeeeEEEEeecCCceeEEEECcHHHHHH
Confidence 8888 6665555666 999999999999999999999999999999999
Q ss_pred cccccCCCCcEEECHHHHHHHhcCCceEEEcceEEeecCCceeEEEEecCCC
Q psy16759 459 RMDSCGVVGRLQVTEDTAKILMASGYDCKCRGQIFVKGKGTLTTYFVKMPYE 510 (512)
Q Consensus 459 Rmes~~~~g~I~vse~t~~~l~~~~~~~~~rg~v~vKGkg~~~ty~v~~~~~ 510 (512)
|||+.+++|+|+||++|++.+.+.+|.++++|.+.+||++++.+||+..+.+
T Consensus 159 Rle~~a~~g~I~vS~~~~~~l~~~~~~~~~~g~~~lKG~~~~~~~~~~~~~~ 210 (220)
T 1ab8_A 159 RMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFVNTEMS 210 (220)
T ss_dssp HHHHTCCTTCEEECHHHHHHHHHHTCCCCC---------------CCC----
T ss_pred HHHhcCCCCeEEECHHHHHHhhcCceEEEEeccEEecCCCceEEEEEecccC
Confidence 9999999999999999999998756999999999999999999999876544
No 2
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=100.00 E-value=2.7e-39 Score=306.08 Aligned_cols=185 Identities=28% Similarity=0.468 Sum_probs=162.6
Q ss_pred ccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCC
Q psy16759 227 HERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQP 306 (512)
Q Consensus 227 ~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~ 306 (512)
.+++++|||||+||+|||++++++ +|++++++||+++..+++++.+| +|+.++|++||+|||+||+|.+..+
T Consensus 4 ~~e~~~vtvlf~Di~gft~l~~~~----~~~~~~~~l~~~~~~~~~~i~~~--~g~~~vk~~GD~~~a~fg~~~~~~~-- 75 (190)
T 3et6_A 4 AQEHPEATVLFSDIVGFTEIASRS----SPLEVXSLLDELYQRFDAAIEEY--PQLYKVETIGDAYMVVCNVTVPCDD-- 75 (190)
T ss_dssp CEEEEEEEEEEEEETTHHHHTTTS----CHHHHHHHHHHHHHHHHHHGGGC--TTEEEEECTTSCEEEEESSSSCCST--
T ss_pred ccccceEEEEEeEecChhHhHhhC----CHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEEeCCEEEEEECCCCCchh--
Confidence 456789999999999999999985 89999999999999999999987 4899999999999999999865443
Q ss_pred CCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhcc
Q psy16759 307 GGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNE 386 (512)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~ 386 (512)
|+.+++ ++|++|++ .+++
T Consensus 76 ---------------------------------------~~~~a~----~~al~~~~---------------~~~~---- 93 (190)
T 3et6_A 76 ---------------------------------------HADVLL----EFALRMHE---------------EASR---- 93 (190)
T ss_dssp ---------------------------------------HHHHHH----HHHHHHHH---------------HHHT----
T ss_pred ---------------------------------------HHHHHH----HHHHHHHH---------------HHHH----
Confidence 444445 99999999 7777
Q ss_pred ccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCCC
Q psy16759 387 TFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVV 466 (512)
Q Consensus 387 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~ 466 (512)
++.....+++ +|||||+|+|++|++|..+++||+|||+||+|+||++.+.+
T Consensus 94 --------------~~~~~~~~l~---------------~riGi~~G~v~~g~vG~~~~~~~v~G~~Vn~Aarl~~~a~~ 144 (190)
T 3et6_A 94 --------------VASSLGEPVR---------------IRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEA 144 (190)
T ss_dssp --------------SCCC---CCC---------------EEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCT
T ss_pred --------------HHhccCCCce---------------EEEEEEeccEEEEecCCCcceEEecCcchhHHHHHHhcCCC
Confidence 6665555666 99999999999999999988999999999999999999999
Q ss_pred CcEEECHHHHHHHhc-CCceEEEcceEEeecCCceeEEEEecCCC
Q psy16759 467 GRLQVTEDTAKILMA-SGYDCKCRGQIFVKGKGTLTTYFVKMPYE 510 (512)
Q Consensus 467 g~I~vse~t~~~l~~-~~~~~~~rg~v~vKGkg~~~ty~v~~~~~ 510 (512)
|+|+||+++++.+.+ ..|.++++|.+.+|||+++.||+|....+
T Consensus 145 ~~I~vs~~~~~~l~~~~~~~~~~~g~~~lkG~~~~~~y~l~~~~~ 189 (190)
T 3et6_A 145 GQIHISEACYCCLRSKERFEIRERGNITVKGKGTMRTYLLSPLER 189 (190)
T ss_dssp TSEEEEHHHHHHCSCGGGTCCCCEEEECCSSSSCEEEEEECCC--
T ss_pred CeEEECHHHHHHhCcCCceEEEEcCCEEecCCCeEEEEEEecccC
Confidence 999999999999975 36999999999999999999999987654
No 3
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=313.04 Aligned_cols=188 Identities=21% Similarity=0.376 Sum_probs=164.0
Q ss_pred CccccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCC
Q psy16759 220 RVTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLR 299 (512)
Q Consensus 220 ~~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~ 299 (512)
+.......+++++|||||+||+|||.+++.+ +|++++++||+++..|++++.+| +++++|++||+|||+||+|
T Consensus 2 ~~g~~~~~~~~~~vtvlF~Di~gfT~l~~~~----~~~~~~~~ln~~~~~~~~~i~~~---~g~v~k~~GD~~ma~fg~p 74 (225)
T 3uvj_A 2 MQGQVVQAKKFSNVTMLFSDIVGFTAICSQC----SPLQVITMLNALYTRFDQQCGEL---DVYKVETIGDAYCVAGGLH 74 (225)
T ss_dssp ---CEEEEEEEEEEEEEEEEETTHHHHHHHS----CHHHHHHHHHHHHHHHHHHHHHH---TCEEECCSTTCEEEEESSS
T ss_pred CCCCccCCcccceEEEEEEEccChHHHHhcC----CHHHHHHHHHHHHHHHHHHHHhc---CeEEEEeeCcEEEEEECCC
Confidence 3455778889999999999999999999985 89999999999999999999998 9999999999999999998
Q ss_pred CCCCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHH
Q psy16759 300 PGLEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEV 379 (512)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~ 379 (512)
.+..+ |+..++ ++|++|++ .
T Consensus 75 ~~~~~-----------------------------------------~a~~a~----~~al~~~~---------------~ 94 (225)
T 3uvj_A 75 KESDT-----------------------------------------HAVQIA----LMALKMME---------------L 94 (225)
T ss_dssp SCCTT-----------------------------------------HHHHHH----HHHHHHHH---------------H
T ss_pred CCchH-----------------------------------------HHHHHH----HHHHHHHH---------------H
Confidence 65433 555566 99999998 7
Q ss_pred HHHhhccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhcc
Q psy16759 380 LWQALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASR 459 (512)
Q Consensus 380 l~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsR 459 (512)
+.+ ++.....++. +|||||+|+|++|++|.++++||+|||+||+|||
T Consensus 95 ~~~------------------~~~~~~~~l~---------------~riGih~G~v~~G~iG~~~~~~~~~Gd~VN~AaR 141 (225)
T 3uvj_A 95 SDE------------------VMSPHGEPIK---------------MRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANK 141 (225)
T ss_dssp HTT------------------SBCTTSCBCC---------------EEEEEEEEEEEEEEECC-CCEEEEESHHHHHHHH
T ss_pred HHH------------------HHhhcCCceE---------------EEEEEEeccEEEEEecCCCceEEEECcHHHHHHH
Confidence 777 6655555666 9999999999999999999999999999999999
Q ss_pred ccccCCCCcEEECHHHHHHHhcC-CceEEEcceEEeecCC----ceeEEEEec
Q psy16759 460 MDSCGVVGRLQVTEDTAKILMAS-GYDCKCRGQIFVKGKG----TLTTYFVKM 507 (512)
Q Consensus 460 mes~~~~g~I~vse~t~~~l~~~-~~~~~~rg~v~vKGkg----~~~ty~v~~ 507 (512)
||+.+.+|+|+||++|++.+.+. +|.++++|.+.+|++. ++.+|++..
T Consensus 142 le~~a~~~~I~vS~~~~~~l~~~~~~~~~~~g~~~lk~~~~~~~~~~~y~l~~ 194 (225)
T 3uvj_A 142 FESCSVPRKINVSPTTYRLLKDCPGFVFTPRSREELPPNFPSEIPGICHFLDA 194 (225)
T ss_dssp HHHTSCTTCEEECHHHHHHHTTSTTEEEEECCSTTSCTTSCTTSCCCCEEEEE
T ss_pred HHhcCCCCeEEECHHHHHhhcCCCceEEEEcCcEEecCCCCCCCceEEEEEec
Confidence 99999999999999999999874 7999999999996432 667898875
No 4
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=100.00 E-value=3.2e-39 Score=314.59 Aligned_cols=188 Identities=24% Similarity=0.465 Sum_probs=163.2
Q ss_pred ccccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCC
Q psy16759 221 VTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRP 300 (512)
Q Consensus 221 ~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~ 300 (512)
...+++.+++++|||||+||+|||.+++.+ +|++++++||++|+.+|+++.++ +++++|++||+|||+||+|.
T Consensus 23 ~~~~l~~~~~~~vtvlF~DI~gfT~l~e~~----~~~~~~~~Ln~~~~~~~~~i~~~---gG~v~k~iGD~~ma~fg~p~ 95 (220)
T 1azs_A 23 MFHKIYIQKHDNVSILFADIEGFTSLASQC----TAQELVMTLNELFARFDKLAAEN---HCLRIKILGDCYYCVSGLPE 95 (220)
T ss_dssp SSCCCEEEEEEEEEEEEEEEETHHHHHHHS----CHHHHHHHHHHHHHHHHHHHHHH---TEEEEEEETTEEEEEESCSS
T ss_pred ccccccccccccEEEEEEEccChHHHHhhC----CHHHHHHHHHHHHHHHHHHHHHc---CcEEEEEeCCeEEEEECCCC
Confidence 346788999999999999999999999986 89999999999999999999998 99999999999999999986
Q ss_pred CCCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHH
Q psy16759 301 GLEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVL 380 (512)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l 380 (512)
+.++ ++..++ ++|++|++ .+
T Consensus 96 ~~~~-----------------------------------------~a~~Av----~~Al~m~~---------------~l 115 (220)
T 1azs_A 96 ARAD-----------------------------------------HAHCCV----EMGMDMIE---------------AI 115 (220)
T ss_dssp CCST-----------------------------------------HHHHHH----HHHHHHHH---------------HH
T ss_pred CChH-----------------------------------------HHHHHH----HHHHHHHH---------------HH
Confidence 5443 444455 99999999 77
Q ss_pred HHhhccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccc
Q psy16759 381 WQALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRM 460 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRm 460 (512)
++ +|.....++. +|||||+|+|++|++|.++++||+|||+||+||||
T Consensus 116 ~~------------------~~~~~~~~l~---------------irIGI~tG~v~~G~vG~~~~~y~v~Gd~VN~AaRL 162 (220)
T 1azs_A 116 SL------------------VREMTGVNVN---------------MRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHM 162 (220)
T ss_dssp HH------------------HHHHHCSCCE---------------EEEEEEEEEEEEEECSSSSCCCEEESHHHHHHHHH
T ss_pred HH------------------HHhhcCCCcE---------------EEEEEEEeEEEEEEeCCCCcEEEEEchHHHHHHHH
Confidence 77 5544344566 99999999999999999999999999999999999
Q ss_pred cccCCCCcEEECHHHHHHHhcCCceEEEcc----eEEeecCCceeEEEEecCCC
Q psy16759 461 DSCGVVGRLQVTEDTAKILMASGYDCKCRG----QIFVKGKGTLTTYFVKMPYE 510 (512)
Q Consensus 461 es~~~~g~I~vse~t~~~l~~~~~~~~~rg----~v~vKGkg~~~ty~v~~~~~ 510 (512)
|+.+.+|+|+||++|++.+.+ .|.+++.+ .+.+||++ ++||+|.++++
T Consensus 163 e~~a~~g~IlvS~~t~~~l~~-~f~~~~~~~~~r~~~lKg~~-v~~Y~l~~~~~ 214 (220)
T 1azs_A 163 EAGGKAGRIHITKATLSYLNG-DYEVEPGCGGERNAYLKEHS-IETFLILRCTQ 214 (220)
T ss_dssp HHTCCTTSEEECSTTTTTTTT-CSCEEECCGGGTCHHHHHTT-CCCEEEC----
T ss_pred HhcCCCCeEEECHHHHHhhcC-ceEEEECcCccccceecCCc-eEEEEEecccc
Confidence 999999999999999999987 79999853 45799997 89999987654
No 5
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=100.00 E-value=3.1e-38 Score=306.98 Aligned_cols=192 Identities=26% Similarity=0.473 Sum_probs=162.0
Q ss_pred cccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCC
Q psy16759 224 DLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLE 303 (512)
Q Consensus 224 ~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~ 303 (512)
...++++++|||||+||+|||.+++.++....|++++++||++|+.||+++.+++..+++|+|++||+|||+||+|.+.+
T Consensus 4 ~~~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~g~~~k~~GD~~ma~fg~p~~~~ 83 (219)
T 2wz1_A 4 PVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVETVGDKYMTVSGLPEPCI 83 (219)
T ss_dssp -CCCEEEEEEEEEEEEETTHHHHHHHSCCC--HHHHHHHHHHHHHHHHHHHCTTTCTTCEEECCCTTCEEEEESSSSCCT
T ss_pred ccCccceeeEEEEEEEccCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCEEEEeecCCEEEEEECCCCCCh
Confidence 46778889999999999999999998622122999999999999999999993221289999999999999999996544
Q ss_pred CCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHh
Q psy16759 304 DQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQA 383 (512)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~ 383 (512)
+ |+..++ ++|++|++ .+++
T Consensus 84 ~-----------------------------------------~a~~A~----~~Al~~~~---------------~~~~- 102 (219)
T 2wz1_A 84 H-----------------------------------------HARSIC----HLALDMME---------------IAGQ- 102 (219)
T ss_dssp T-----------------------------------------HHHHHH----HHHHHHHH---------------HHTT-
T ss_pred h-----------------------------------------HHHHHH----HHHHHHHH---------------HHHH-
Confidence 3 454455 99999999 7777
Q ss_pred hccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhcccccc
Q psy16759 384 LNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSC 463 (512)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~ 463 (512)
+|.. ..++. +|||||+|+|++|++|+.+++||+|||+||+|||||+.
T Consensus 103 -----------------~~~~-~~~l~---------------~rIGi~~G~v~~G~iG~~~~~~~v~Gd~VN~AaRLe~~ 149 (219)
T 2wz1_A 103 -----------------VQVD-GESVQ---------------ITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETT 149 (219)
T ss_dssp -----------------CEET-TEECC---------------EEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHT
T ss_pred -----------------Hhcc-CCceE---------------EEEEEEEEEEEEEEeCCCceEEEEECHHHHHHHHHHhc
Confidence 5543 33455 99999999999999999999999999999999999999
Q ss_pred CCCCcEEECHHHHHHHh-----cCCceEEEcceEEeecCCc-eeEEEEecCC
Q psy16759 464 GVVGRLQVTEDTAKILM-----ASGYDCKCRGQIFVKGKGT-LTTYFVKMPY 509 (512)
Q Consensus 464 ~~~g~I~vse~t~~~l~-----~~~~~~~~rg~v~vKGkg~-~~ty~v~~~~ 509 (512)
+.+|+|+||++|++.+. ...|.++++|.+.+||+++ ++.|.+....
T Consensus 150 a~~~~IlvS~~~~~~l~~~~~~~~~~~~~~~g~~~lKG~~~~~~vy~l~~~~ 201 (219)
T 2wz1_A 150 GEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKKEPMQVWFLSRKN 201 (219)
T ss_dssp SCTTSEEEEHHHHHHTTSTTTCCTTEEEEEEEEECCTTCSSCEEEEEEEESC
T ss_pred CCCCeEEECHHHHHHHhhhcccCCceEEEEeCCEEecCCCccEEEEEEeccC
Confidence 99999999999999997 2479999999999999986 6778776543
No 6
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-39 Score=313.38 Aligned_cols=186 Identities=30% Similarity=0.523 Sum_probs=163.6
Q ss_pred cccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCC
Q psy16759 224 DLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLE 303 (512)
Q Consensus 224 ~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~ 303 (512)
+...++++++||||+||+|||.+++++ +|++++++||++|..+++++.+| +++++|++||+|||+||+|.+.+
T Consensus 2 ~~~~~~~~~vtvlf~DI~gfT~l~~~~----~~~~~~~~ln~~~~~~~~~i~~~---gG~v~k~~GD~~ma~fg~p~~~~ 74 (204)
T 1yk9_A 2 NIIADKYDEASVLFADIVGFTERASST----APADLVRFLDRLYSAFDELVDQH---GLEKIEVSGDSYMVVSGVPRPRP 74 (204)
T ss_dssp ----CCCSCEEEEEEEESCSSCSSCCC----CSSSTTTHHHHHHTTTTGGGTTS---SCEECCCSSSCEEEESCCSSCCT
T ss_pred CCCccccCcEEEEEEEccChHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHc---CCEEEEEeCCeEEEEECCCCCCh
Confidence 345677899999999999999999875 78899999999999999999998 99999999999999999986544
Q ss_pred CCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHh
Q psy16759 304 DQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQA 383 (512)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~ 383 (512)
+ |+..++ ++|++|++ .+++
T Consensus 75 ~-----------------------------------------~a~~A~----~~Al~~~~---------------~~~~- 93 (204)
T 1yk9_A 75 D-----------------------------------------HTQALA----DFALDMTN---------------VAAQ- 93 (204)
T ss_dssp T-----------------------------------------HHHHHH----THHHHHHH---------------HTTT-
T ss_pred H-----------------------------------------HHHHHH----HHHHHHHH---------------HHHH-
Confidence 3 444445 99999998 7776
Q ss_pred hccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhcccccc
Q psy16759 384 LNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSC 463 (512)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~ 463 (512)
+|.....+++ +|||||+|+|++|++|.++++||+|||+||+|+|||+.
T Consensus 94 -----------------~~~~~~~~l~---------------~rIGI~tG~v~~g~vG~~r~~~~v~G~~Vn~AaRle~~ 141 (204)
T 1yk9_A 94 -----------------LKDPRGNPVP---------------LRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMEST 141 (204)
T ss_dssp -----------------CCSSSCCCCC---------------EEEEEEEECEEECCCCSSSCCCCEEEHHHHHTTHHHHS
T ss_pred -----------------HHhccCCCce---------------EEEEEEeeEEEEEEecCCCceEEEEChHHHHHHHHHhc
Confidence 6655555566 99999999999999999999999999999999999999
Q ss_pred CCCCcEEECHHHHHHHhcCCceEEEcceEEeecCCceeEEEEecCCC
Q psy16759 464 GVVGRLQVTEDTAKILMASGYDCKCRGQIFVKGKGTLTTYFVKMPYE 510 (512)
Q Consensus 464 ~~~g~I~vse~t~~~l~~~~~~~~~rg~v~vKGkg~~~ty~v~~~~~ 510 (512)
+.+|+|+||+++++.+.+ .|.++++|.+.+||++++.+|++.+..+
T Consensus 142 a~~g~I~vs~~~~~~l~~-~~~~~~~g~~~lkG~~~~~~y~l~~~~~ 187 (204)
T 1yk9_A 142 DSVGQIQVPDEVYERLKD-DFVLRERGHINVKGKGVMRTWYLIGRKV 187 (204)
T ss_dssp CSTTCEEBCHHHHHCCTT-CEEEEECCCCCCSSSSSCCCCEEEEEEC
T ss_pred CCCCeEEECHHHHHHhhc-CeeEEEcceEEecCCCccEEEEEEeccC
Confidence 999999999999999987 7999999999999999999999986543
No 7
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=100.00 E-value=1.1e-36 Score=321.03 Aligned_cols=203 Identities=18% Similarity=0.179 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHhccCC-------HHHHHHHHhcCCCC-----CccccccccccceEEEEEEecCchhhhhhhcccccCh
Q psy16759 189 VETMRGINKILLENILP-------AHVAQHFLHSSSSS-----RVTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQG 256 (512)
Q Consensus 189 ~~~~~~~~~~lL~~~lP-------~~V~~~ll~~~~~~-----~~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~ 256 (512)
.++++++.+.||.++|| ++|++++....... +.....+.+++++|||+|+||+|||.+++++ +|
T Consensus 160 ~~ee~~kse~LL~~iLP~L~~~l~~~va~~L~~~~~~~~v~~~~r~~~~~~~~~~~vTVlFaDIvgFT~ls~~~----~p 235 (407)
T 1y10_A 160 ELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVV----SA 235 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTCEEEEEEEEEECSBCTTSCBC----CH
T ss_pred cHhHHHHHHHHHHHhcccccccchHHHHHHHHhcccchhhhhhhhcccccccceeeEEEEEEEccCchHHHhhC----CH
Confidence 34556778889999999 89999877653100 0001134456799999999999999999985 89
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCCCCccccccccccCCCCCCCCCcccccccC
Q psy16759 257 LECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDA 336 (512)
Q Consensus 257 ~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (512)
.+++++||+++..+|.++. + +++|+||+||+|||+||+|.
T Consensus 236 ~evv~lLn~~~~~~~~i~~-~---~g~~iKtiGDa~mavfg~p~------------------------------------ 275 (407)
T 1y10_A 236 EELGHLAGRLAGLARDLTA-P---PVWFIKTIGDAVMLVCPDPA------------------------------------ 275 (407)
T ss_dssp HHHHHHHHHHHHHHHHHCC-T---TCEEEEEETTEEEEEESSHH------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHH-c---CcEEEEEecceEEEEECCHH------------------------------------
Confidence 9999999999999988775 5 89999999999999999871
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccccccCCCcchhhhhcccccccccccccCcc
Q psy16759 337 NGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVS 416 (512)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 416 (512)
.++ ++|++|++ .+.+ .+ ..++
T Consensus 276 ------------~a~----~~Al~m~~---------------~l~~------------------~~----~~l~------ 296 (407)
T 1y10_A 276 ------------PLL----DTVLKLVE---------------VVDT------------------DN----NFPR------ 296 (407)
T ss_dssp ------------HHH----HHHHHHHH---------------HHHT------------------CT----TSCC------
T ss_pred ------------HHH----HHHHHHHH---------------HHHH------------------hC----CCce------
Confidence 123 89999998 6665 22 2345
Q ss_pred ccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCCCCcEEECHHHHHHHhc----CCceEEEcceE
Q psy16759 417 DIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMA----SGYDCKCRGQI 492 (512)
Q Consensus 417 ~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~~g~I~vse~t~~~l~~----~~~~~~~rg~v 492 (512)
+|||||+|||++|+ ||+|||+||+|||||++++||+|+||++|++.+.+ .+|.|+++|.+
T Consensus 297 ---------iRIGIhtG~Vv~Gv-------ydv~GdtVN~AsRLes~a~~g~I~vS~~t~~~l~~~~~~~~f~~~~~G~v 360 (407)
T 1y10_A 297 ---------LRAGVASGMAVSRA-------GDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPR 360 (407)
T ss_dssp ---------EEEEEEEEEEEEET-------TEEEEHHHHHHHHHHHHCCTTCEEEEHHHHHSCCCC---CCCEEEEEEEE
T ss_pred ---------EEEEEEEEEEEEec-------CccCCCHHHHHHHHHhcCCCCeEEECHHHHHHHhcccccCceEEEEeceE
Confidence 99999999999994 89999999999999999999999999999999987 48999999999
Q ss_pred EeecC-CceeEEEEecCCC
Q psy16759 493 FVKGK-GTLTTYFVKMPYE 510 (512)
Q Consensus 493 ~vKGk-g~~~ty~v~~~~~ 510 (512)
.+||| +++.+|++..+.+
T Consensus 361 ~lKGk~~~v~~y~l~~~~~ 379 (407)
T 1y10_A 361 RLRGIRGDVRLFRVRRGAT 379 (407)
T ss_dssp CCTTCCSCEEEEEEEC---
T ss_pred EeCCCCCceEEEEEcccCC
Confidence 99998 8999999987554
No 8
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=100.00 E-value=3.8e-36 Score=289.28 Aligned_cols=183 Identities=15% Similarity=0.212 Sum_probs=159.5
Q ss_pred ccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCC
Q psy16759 227 HERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQP 306 (512)
Q Consensus 227 ~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~ 306 (512)
..+++++||||+||+|||.+++.+ +|++++++||+++..+++++.+| +++++|++||+|||+||.|.+.++
T Consensus 9 ~~e~~~vtvlf~Di~gfT~l~~~~----~~~~~~~~l~~~~~~~~~~i~~~---~G~v~k~~GD~~~a~fg~p~~~~~-- 79 (208)
T 2w01_A 9 GGDRRPITILTSDLRGFTSTSEGL----NPEEVVKVLNIYFGKMADVITHH---GGTIDEFMGDGILVLFGAPTSQQD-- 79 (208)
T ss_dssp CCEEEEEEEEEEECTTHHHHGGGS----CHHHHHHHHHHHHHHHHHHHHHT---TCEEEEEETTEEEEEESSSSCCTT--
T ss_pred CCeEEEEEEEEEEecChHHHHhhC----CHHHHHHHHHHHHHHHHHHHHHc---CCEEEEEEcCEEEEEECCCCCChh--
Confidence 345689999999999999999985 89999999999999999999998 899999999999999999865433
Q ss_pred CCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhcc
Q psy16759 307 GGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNE 386 (512)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~ 386 (512)
|+..++ ++|++|++ .+++
T Consensus 80 ---------------------------------------~a~~Av----~~Al~~~~---------------~l~~---- 97 (208)
T 2w01_A 80 ---------------------------------------DALRAV----ACGVEMQL---------------ALRE---- 97 (208)
T ss_dssp ---------------------------------------HHHHHH----HHHHHHHH---------------HHHH----
T ss_pred ---------------------------------------HHHHHH----HHHHHHHH---------------HHHH----
Confidence 444444 99999998 7766
Q ss_pred ccccCCCcchhhhhcccc----cccccccccCccccccccceeEEEEeeeccEEEeeeCCC-CCCceEeCchHHHhcccc
Q psy16759 387 TFTHSSNVSTVLFYRNRT----SEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQ-KPQYDIWSNTVNVASRMD 461 (512)
Q Consensus 387 ~~~~~~~~~~~~~~~n~~----~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~-k~~Ydi~GdtVN~AsRme 461 (512)
+|.. ...+++ +|||||+|+|++|++|+. |++||+|||+||+|+||+
T Consensus 98 --------------~~~~~~~~~~~~l~---------------~riGi~~G~v~~g~vG~~~r~~~~v~G~~Vn~AaRl~ 148 (208)
T 2w01_A 98 --------------VNQQVTGLGLQPLE---------------MGIGINTGEVVVGNIGSEKRTKYGVVGAQVNLTYRIE 148 (208)
T ss_dssp --------------HHHHHHTTTCCCCC---------------CEEEEEEEEEEEEEEECSSCEEEEEESHHHHHHHHHH
T ss_pred --------------HHHHHhhcCCCceE---------------EEEEEEeeEEEEEEeCCCCeeEEEEECHHHHHHHHHH
Confidence 4332 223455 999999999999999985 899999999999999999
Q ss_pred ccCCCCcEEECHHHHHHHhcCCceEEEcceEEeecCC-ceeEEEEecCCC
Q psy16759 462 SCGVVGRLQVTEDTAKILMASGYDCKCRGQIFVKGKG-TLTTYFVKMPYE 510 (512)
Q Consensus 462 s~~~~g~I~vse~t~~~l~~~~~~~~~rg~v~vKGkg-~~~ty~v~~~~~ 510 (512)
+.+.+|+|+||++|++.+.+ .|.++..|.+.+||++ ++++|.+.+..+
T Consensus 149 ~~a~~~~I~vs~~~~~~l~~-~~~~~~~~~~~lkG~~~~~~vy~v~~~~~ 197 (208)
T 2w01_A 149 SYTTGGQIFISSTTLEAAGD-RVHVNGNRTVQPKGVKDPVVIWDVAGVGE 197 (208)
T ss_dssp HTCCTTCEEEEHHHHHHHCT-TEEEEEEEEECCTTCSSCEEEEEEEEECT
T ss_pred ccCCCCeEEECHHHHHhhhc-ceEecccceEeecCCCCcEEEEEEccCCc
Confidence 99999999999999999987 7999999999999986 789999986544
No 9
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=100.00 E-value=1.8e-36 Score=288.34 Aligned_cols=186 Identities=23% Similarity=0.329 Sum_probs=160.0
Q ss_pred cccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCC
Q psy16759 228 ERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPG 307 (512)
Q Consensus 228 ~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~ 307 (512)
.+.++|||||+||+|||.+++.+ +|+++.++||+++..+++++.+| +++++|++||+|||+||+|.....
T Consensus 5 ~e~~~vtvlf~Di~gft~l~~~~----~~~~~~~~l~~~~~~~~~~i~~~---~G~v~k~~GD~~~a~fg~p~~~~~--- 74 (198)
T 3r5g_A 5 TQRKKLTVFFSDIRGFTELSEEL----EAEALTDLLNNYLNEMSKIALKY---GGTIDKFVGDCVMVFFGDPSTQGA--- 74 (198)
T ss_dssp CEEEEEEEEEEEEETHHHHHTTS----CHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEETTEEEEEESSSSCSCH---
T ss_pred ceEEEEEEEEEEccccchhhhhC----CHHHHHHHHHHHHHHHHHHHHHc---CCEEEeeeCCEEEEEECCCccccc---
Confidence 34589999999999999999985 89999999999999999999998 999999999999999999854311
Q ss_pred CCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccc
Q psy16759 308 GSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNET 387 (512)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~ 387 (512)
+.++.+++ ++|++|++ .+.+
T Consensus 75 ------------------------------------~~~a~~a~----~~al~i~~---------------~~~~----- 94 (198)
T 3r5g_A 75 ------------------------------------KKDAVAAV----SMGIAMRK---------------HMKV----- 94 (198)
T ss_dssp ------------------------------------HHHHHHHH----HHHHHHHH---------------HHHH-----
T ss_pred ------------------------------------HHHHHHHH----HHHHHHHH---------------HHHH-----
Confidence 11444444 99999998 6665
Q ss_pred cccCCCcchhhhhccccc-----ccccccccCccccccccceeEEEEeeeccEEEeeeCCC-CCCceEeCchHHHhcccc
Q psy16759 388 FTHSSNVSTVLFYRNRTS-----EMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQ-KPQYDIWSNTVNVASRMD 461 (512)
Q Consensus 388 ~~~~~~~~~~~~~~n~~~-----~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~-k~~Ydi~GdtVN~AsRme 461 (512)
+|... ..+++ +|||||+|+|++|++|.. +++||+|||+||+|+||+
T Consensus 95 -------------~~~~~~~~~~~~~l~---------------~riGi~~G~v~~g~vG~~~~~~~~v~G~~Vn~Aarl~ 146 (198)
T 3r5g_A 95 -------------LRQQWRAQGITKPLE---------------IRMGINTGYCTVGNFGADTRMDYTIIGREVNLASRLE 146 (198)
T ss_dssp -------------HHHHHHTTTCCSCCE---------------EEEEEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHH
T ss_pred -------------HHHHHHhcCCCCceE---------------EEEEEEEEEEEEEEeCCCcceEEEEECcHHHHHHHHH
Confidence 33321 12344 999999999999999987 799999999999999999
Q ss_pred ccCCCCcEEECHHHHHHHhcCCceEEEcceEEeecCC-ceeEEEEecCCCCC
Q psy16759 462 SCGVVGRLQVTEDTAKILMASGYDCKCRGQIFVKGKG-TLTTYFVKMPYESI 512 (512)
Q Consensus 462 s~~~~g~I~vse~t~~~l~~~~~~~~~rg~v~vKGkg-~~~ty~v~~~~~~~ 512 (512)
+.+.+|+|+||++|++.+++ .|.++++|.+.+||++ +++.|.|.+.+.++
T Consensus 147 ~~a~~~~I~vs~~~~~~l~~-~~~~~~~g~~~lkG~~~p~~vy~v~~~~~~~ 197 (198)
T 3r5g_A 147 SASEAGEILISHETYSLIKD-VIMCRDKGQIAVKGFSRPVQIYQVVDSRRDL 197 (198)
T ss_dssp HHCCTTCEEEEHHHHHHHTT-TSCEEEEEEECCTTCSSCEEEEEECCCTTCC
T ss_pred hhCCCCcEEECHHHHHHhhc-CceEEEcccEEeecCCCcEEEEEEeeecccC
Confidence 99999999999999999987 7999999999999987 58999998877653
No 10
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=100.00 E-value=8.2e-36 Score=289.64 Aligned_cols=191 Identities=15% Similarity=0.181 Sum_probs=154.7
Q ss_pred cccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCC
Q psy16759 228 ERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPG 307 (512)
Q Consensus 228 ~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~ 307 (512)
.+.+++||||+||+|||.+++.+ +|++++++||+++..+++++.++ +++++|++||+|||+||+|...++
T Consensus 23 ~e~~~vtvlF~DI~gfT~l~~~~----~~~~~~~~Ln~~~~~~~~~i~~~---gG~v~k~iGD~~ma~fg~p~~~~~--- 92 (219)
T 1wc3_A 23 PEPRLITILFSDIVGFTRMSNAL----QSQGVAELLNEYLGEMTRAVFEN---QGTVDKFVGDAIMALYGAPEEMSP--- 92 (219)
T ss_dssp CEEEEEEEEEEEEESHHHHHHTS----CHHHHHHHHHHHHHHHHHHHHHT---TCEEEEEETTEEEEEESSSSCCCH---
T ss_pred CceeEEEEEEEEecChHHHHhhC----CHHHHHHHHHHHHHHHHHHHHHc---CCEEEEEEcCeEEEEECCCCCCCC---
Confidence 34589999999999999999985 89999999999999999999998 899999999999999999854321
Q ss_pred CCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccc
Q psy16759 308 GSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNET 387 (512)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~ 387 (512)
+.++..++ ++|++|++ .+++
T Consensus 93 ------------------------------------~~~a~~Av----~~Al~~~~---------------~l~~----- 112 (219)
T 1wc3_A 93 ------------------------------------SEQVRRAI----ATARQMLV---------------ALEK----- 112 (219)
T ss_dssp ------------------------------------HHHHHHHH----HHHHHHHH---------------HHHH-----
T ss_pred ------------------------------------hHHHHHHH----HHHHHHHH---------------HHHH-----
Confidence 01344444 99999998 6665
Q ss_pred cccCCCcchhhhhcccccccc-cccccCccccccccceeEEEEeeeccEEEeeeCCC-CCCceEeCchHHHhccccccCC
Q psy16759 388 FTHSSNVSTVLFYRNRTSEMD-INMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQ-KPQYDIWSNTVNVASRMDSCGV 465 (512)
Q Consensus 388 ~~~~~~~~~~~~~~n~~~~~~-~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~-k~~Ydi~GdtVN~AsRmes~~~ 465 (512)
+|...... +. ......++.+|||||+|+|++|++|+. |++||+|||+||+|+|||+.++
T Consensus 113 -------------~~~~~~~~~~~------~~~~~~~l~~rIGIh~G~v~~G~vG~~~r~~y~v~Gd~VN~AaRLe~~a~ 173 (219)
T 1wc3_A 113 -------------LNQGWQERGLV------GRNEVPPVRFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATA 173 (219)
T ss_dssp -------------HHHHHHHHTSS------SSTTCCCCEEEEEEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHSC
T ss_pred -------------HHHHHhhcccc------cccCCCccEEEEEEEeceEEEEEcCCCCeeEEEEECHHHHHHHHHHhcCC
Confidence 33221100 00 000012233999999999999999985 8999999999999999999999
Q ss_pred CCcEEECHHHHHHHhcCCceEEEcceEEeecCC-ceeEEEEecCC
Q psy16759 466 VGRLQVTEDTAKILMASGYDCKCRGQIFVKGKG-TLTTYFVKMPY 509 (512)
Q Consensus 466 ~g~I~vse~t~~~l~~~~~~~~~rg~v~vKGkg-~~~ty~v~~~~ 509 (512)
+|+|+||+++++.+.+ ..++++|.+.+||++ ++++|.+....
T Consensus 174 ~g~IlvS~~~~~~l~~--~~~~~~g~~~lKG~~~~v~vy~v~~~~ 216 (219)
T 1wc3_A 174 PNSIMVSAMVAQYVPD--EEIIKREFLELKGIDEPVMTCVINPNM 216 (219)
T ss_dssp TTEEEEEHHHHTTSCG--GGEEEEEEECCTTCSSCEEEEEECSCC
T ss_pred CCeEEECHHHHHhhcc--cceeEeeeEEecccCCcEEEEEEcCcc
Confidence 9999999999998876 378999999999987 78999987543
No 11
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=100.00 E-value=6.9e-35 Score=284.94 Aligned_cols=194 Identities=15% Similarity=0.148 Sum_probs=150.4
Q ss_pred cccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCCCCC
Q psy16759 224 DLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLE 303 (512)
Q Consensus 224 ~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~ 303 (512)
....+++++|||||+||+|||.+++. .|++++++||+++..+++++.+| +++++|++||+|||+||.|.
T Consensus 4 ~~~~~~~~~vtvlF~DI~gfT~l~~~-----~~~~~~~~l~~~~~~~~~~i~~~---~G~v~k~~GD~~ma~fg~p~--- 72 (235)
T 1fx2_A 4 RAPKEPTDPVTLIFTDIESSTALWAA-----HPDLMPDAVAAHHRMVRSLIGRY---KCYEVKTVGDSFMIASKSPF--- 72 (235)
T ss_dssp GSCCCTTSCEEEEEEEETTHHHHHHH-----CTTTHHHHHHHHHHHHHHHHHHT---TCEEEEEETTEEEEEESCHH---
T ss_pred cCCCCCCCcEEEEEEeccChHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHc---CCEEEEEcCCeEEEEeCCHH---
Confidence 45677889999999999999999987 47789999999999999999998 99999999999999999861
Q ss_pred CCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHh
Q psy16759 304 DQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQA 383 (512)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~ 383 (512)
+ |+++|++|++ .+.+.
T Consensus 73 ------------------------------------------~-------A~~~Al~i~~---------------~l~~~ 88 (235)
T 1fx2_A 73 ------------------------------------------A-------AVQLAQELQL---------------CFLHH 88 (235)
T ss_dssp ------------------------------------------H-------HHHHHHHHHH---------------HHHHS
T ss_pred ------------------------------------------H-------HHHHHHHHHH---------------HHHhC
Confidence 1 2388888887 33220
Q ss_pred -------------hccccc-----cCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCC
Q psy16759 384 -------------LNETFT-----HSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKP 445 (512)
Q Consensus 384 -------------~~~~~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~ 445 (512)
.+..-. ..++.....+...+..+.+++ +|||||+|+|++|++|. ++
T Consensus 89 ~w~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~---------------~riGIh~G~v~~G~~G~-~~ 152 (235)
T 1fx2_A 89 DWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVYSRLWNGLR---------------VRVGIHTGLCDIRHDEV-TK 152 (235)
T ss_dssp CCSCSHHHHHHHHHHHHHHHHCSSCCCSSTTSCHHHHHHHCCSCC---------------EEEEEEEECCEEEECTT-SS
T ss_pred CCchhHhhhhhhhhhhhccccccccCccccccccccccccccCcE---------------EEEEEEeeEEEEEeccc-cc
Confidence 000000 000000000000000112344 99999999999999998 88
Q ss_pred CceEeCchHHHhccccccCCCCcEEECHHHHHHHhc---CCceEEEcceEEeecCC-ceeEEEEecC
Q psy16759 446 QYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMA---SGYDCKCRGQIFVKGKG-TLTTYFVKMP 508 (512)
Q Consensus 446 ~Ydi~GdtVN~AsRmes~~~~g~I~vse~t~~~l~~---~~~~~~~rg~v~vKGkg-~~~ty~v~~~ 508 (512)
+||+|||+||+|||||+.+++|+|+||++|++.+.+ .+|.++++|.+.+||++ ++++|.+...
T Consensus 153 ~~~v~Gd~VN~AaRle~~a~~g~IlvS~~~~~~l~~~~~~~~~~~~~g~~~lkG~~~~v~vy~l~~~ 219 (235)
T 1fx2_A 153 GYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALRGVSDPVKMYQLNTV 219 (235)
T ss_dssp SEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHTSCHHHHHTCCEEEEEEECCTTCSSCEEEEEECCS
T ss_pred ceEEECHHHHHHHHHHhhcCCCEEEECHHHHHHHhhhcccCceeEecccEEecccCCceEEEEEecc
Confidence 999999999999999999999999999999999853 36999999999999998 6799998754
No 12
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=100.00 E-value=1.5e-34 Score=273.75 Aligned_cols=173 Identities=13% Similarity=0.044 Sum_probs=150.5
Q ss_pred ccccccccccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeCCCC
Q psy16759 221 VTQDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASGLRP 300 (512)
Q Consensus 221 ~~~~l~~~~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~ 300 (512)
.....+..+++++||||+||+|||.+++++ +|+++.++||+++..+++++.+| +++++|++||+|||+||.|.
T Consensus 6 ~~~~~~~~~~~~~tvlf~Di~gft~l~~~~----~~~~~~~~l~~~~~~~~~~i~~~---gG~v~k~~GD~~ma~f~~p~ 78 (184)
T 1ybt_A 6 HHHHHGSAERMLATIMFTDIVGSTQHAAAL----GDDRWRDLLDNHDTIVCHEIQRF---GGREVNTAGDGFVATFTSPS 78 (184)
T ss_dssp -------CEEEEEEEEEEEETTHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHT---TCEECCCSSSSEEEEESCHH
T ss_pred CCCCCCCCceEEEEEEEEECcCcHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHc---CCEEEeEeCCEEEEEeCCHH
Confidence 445677788899999999999999999985 89999999999999999999998 99999999999999999760
Q ss_pred CCCCCCCCCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHH
Q psy16759 301 GLEDQPGGSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVL 380 (512)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l 380 (512)
.|+++|++|++ .+
T Consensus 79 ----------------------------------------------------~A~~~Al~~~~---------------~l 91 (184)
T 1ybt_A 79 ----------------------------------------------------AAIACADDIVD---------------AV 91 (184)
T ss_dssp ----------------------------------------------------HHHHHHHHHHH---------------HH
T ss_pred ----------------------------------------------------HHHHHHHHHHH---------------HH
Confidence 13399999998 77
Q ss_pred HHhhccccccCCCcchhhhhcccccccccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccc
Q psy16759 381 WQALNETFTHSSNVSTVLFYRNRTSEMDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRM 460 (512)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRm 460 (512)
.+ .| ++ +|||||+|+|++|.+|.. ||+|||+||+|+||
T Consensus 92 ~~------------------~~------l~---------------~riGi~~G~v~~g~ig~~---~~~~G~~Vn~AaRl 129 (184)
T 1ybt_A 92 AA------------------LG------IE---------------VRIGIHAGEVEVRDASHG---TDVAGVAVHIGARV 129 (184)
T ss_dssp HT------------------TT------CC---------------EEEEEEEEEEEEEECSSC---EEEESHHHHHHHHH
T ss_pred Hh------------------cC------Cc---------------EEEEEEEeEEEEEecCCC---ceEECcHHHHHHHH
Confidence 76 32 55 999999999999999875 99999999999999
Q ss_pred cccCCCCcEEECHHHHHHHhcCCceEEEcceEEeecCC-ceeEEEEecCC
Q psy16759 461 DSCGVVGRLQVTEDTAKILMASGYDCKCRGQIFVKGKG-TLTTYFVKMPY 509 (512)
Q Consensus 461 es~~~~g~I~vse~t~~~l~~~~~~~~~rg~v~vKGkg-~~~ty~v~~~~ 509 (512)
++.+++|+|+||+++++.+.+..|.++++|.+.+||++ ++++|.+....
T Consensus 130 ~~~a~~g~IlvS~~~~~~l~~~~~~~~~~g~~~lkG~~~~~~vy~l~~~~ 179 (184)
T 1ybt_A 130 CALAGPSEVLVSSTVRDIVAGSRHRFAERGEQELKGVPGRWRLCVLMRDD 179 (184)
T ss_dssp HHHSCTTCEEEEHHHHHHTTTSSCCEEEEEEECCTTSSSCEEEEEECCCC
T ss_pred HhcCCCCEEEECHHHHHhhcccCceEEEcCCEEecCCCCcEEEEEEecCC
Confidence 99999999999999999996558999999999999975 88999997654
No 13
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=99.98 E-value=7.3e-32 Score=255.28 Aligned_cols=166 Identities=17% Similarity=0.211 Sum_probs=143.3
Q ss_pred ccceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHH-HHHHhcccCCCCeEEEeEecceEEEEeCCCCCCCCCCC
Q psy16759 229 RYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICD-FDKLLLKPKFSSIEKIKTIGSTYMLASGLRPGLEDQPG 307 (512)
Q Consensus 229 ~~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~-fd~li~~~~~~~~~kiK~iGd~ymaa~Gl~~~~~~~~~ 307 (512)
++++|||||+||+|||.+++.+ +| +.+..||++|.. +++++.+| +++++|++||+|||+||.+
T Consensus 4 e~r~vtvlf~Di~gft~l~~~~----~~-~~~~~l~~~~~~~~~~~i~~~---~G~v~k~~GD~~~a~f~~~-------- 67 (189)
T 3mr7_A 4 ERRLCAILAADMAGYSRLMERN----ET-DVLNRQKLYRRELIDPAIAQA---GGQIVKTTGDGMLARFDTA-------- 67 (189)
T ss_dssp EEEEEEEEEEEECCCCGGGCCC----CH-HHHHHHHHHHHHTHHHHHHHT---TCEEEEEETTEEEEEESSH--------
T ss_pred cEEEEEEEEEEchhhHHHHhhC----CH-HHHHHHHHHHHHHHHHHHHHc---CCEEEEEeCCEEEEEeCCH--------
Confidence 4578999999999999999873 44 456889999998 99999998 9999999999999999943
Q ss_pred CCccccccccccCCCCCCCCCcccccccCCCCCCCCCcchhhhhhhHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhccc
Q psy16759 308 GSNVFHLILWIPSRTGLSESDTDYITSDANGSASGGEFNSVVSGNYYLRIGIFVTTVVIVAVDVQELQDVEVLWQALNET 387 (512)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~m~~~~~~~~~~~~~~~~~~l~~~~~~~ 387 (512)
. .|+++|++|++ .+.+
T Consensus 68 ----------------------------------------~----~A~~~Al~i~~---------------~l~~----- 83 (189)
T 3mr7_A 68 ----------------------------------------Q----AALRCALEIQQ---------------AMQQ----- 83 (189)
T ss_dssp ----------------------------------------H----HHHHHHHHHHH---------------HHHH-----
T ss_pred ----------------------------------------H----HHHHHHHHHHH---------------HHHH-----
Confidence 1 13399999999 8888
Q ss_pred cccCCCcchhhhhcccccc--cccccccCccccccccceeEEEEeeeccEEEeeeCCCCCCceEeCchHHHhccccccCC
Q psy16759 388 FTHSSNVSTVLFYRNRTSE--MDINMSLGVSDIFSSCLICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGV 465 (512)
Q Consensus 388 ~~~~~~~~~~~~~~n~~~~--~~~~~~~~~~~~~~~~~~~lrIGI~~G~VvaGviG~~k~~Ydi~GdtVN~AsRmes~~~ 465 (512)
+|.... .++. +|||||+|+|++| .||+|||+||+|+||++.++
T Consensus 84 -------------~~~~~~~~~~l~---------------~riGi~~G~v~~g-------~~~~~G~~Vn~AaRl~~~a~ 128 (189)
T 3mr7_A 84 -------------REEDTPRKERIQ---------------YRIGINIGDIVLE-------DGDIFGDAVNVAARLEAISE 128 (189)
T ss_dssp -------------HTTTSCGGGCCC---------------EEEEEEEEEEEEC-------SSCEESHHHHHHHHHHHHSC
T ss_pred -------------HhhhcccCCcee---------------EEEEEEEEEEEEE-------CCeEEChHHHHHHHHHhhCC
Confidence 554422 2455 9999999999999 79999999999999999999
Q ss_pred CCcEEECHHHHHHHhcC-CceEEEcceEEeecCC-ceeEEEEecCC
Q psy16759 466 VGRLQVTEDTAKILMAS-GYDCKCRGQIFVKGKG-TLTTYFVKMPY 509 (512)
Q Consensus 466 ~g~I~vse~t~~~l~~~-~~~~~~rg~v~vKGkg-~~~ty~v~~~~ 509 (512)
+|+|+||+++++.+.+. +|.++++|.+.+||++ ++++|.+..+.
T Consensus 129 ~~~I~vs~~~~~~l~~~~~~~~~~~g~~~lkG~~~~v~vy~~~~~~ 174 (189)
T 3mr7_A 129 PGAICVSDIVHQITQDRVSEPFTDLGLQKVKNITRPIRVWQWVPDA 174 (189)
T ss_dssp TTCEEEEHHHHHHHTTTCCSCCEEEEEEEETTEEEEEEEEEECCCC
T ss_pred CCeEEECHHHHHhhccccCceEEECCCEEeCCcCCcEEEEEEcccc
Confidence 99999999999999873 5999999999999988 48999997644
No 14
>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus}
Probab=96.49 E-value=0.014 Score=45.73 Aligned_cols=49 Identities=22% Similarity=0.405 Sum_probs=39.6
Q ss_pred hhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHhc
Q psy16759 166 RQMEFTARTDFLWQAKLKVEQDDVETMRGINKILLENILPAHVAQHFLHS 215 (512)
Q Consensus 166 r~~e~~~R~~f~~~~~~~~~~~~~~~~~~~~~~lL~~~lP~~V~~~ll~~ 215 (512)
-+.+...|+.-. +.++++..++++.+|++.+.||.++||++||+.+..+
T Consensus 18 ae~~L~~~lE~~-~~~Lee~t~~L~~EK~ktd~LL~~mLP~~VA~~Lk~G 66 (66)
T 3hls_A 18 EEYKLTQELEML-TDRLQLTLRALEDEKKKTDTLLYSVLPPSVANELRHK 66 (66)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHC-
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHhCc
Confidence 345556666543 5788888999999999999999999999999998753
No 15
>3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV}
Probab=39.37 E-value=1.7e+02 Score=24.64 Aligned_cols=58 Identities=7% Similarity=-0.094 Sum_probs=34.6
Q ss_pred ceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEe
Q psy16759 231 NCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLAS 296 (512)
Q Consensus 231 ~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~ 296 (512)
...++++.||.+|..+.+.. .. + .-++++..+-+.+.+.--.+...-.+=||.++...
T Consensus 41 ~~~~l~~idid~f~~in~~~----G~-~---~gd~~L~~ia~~L~~~~~~~~~~~R~~~deF~il~ 98 (167)
T 3qyy_A 41 WPFVLFVLDMDNLKPINDRF----GH-L---AGDRVLVRLVESAYGWLGAQDWIGRWGGDEFLIGV 98 (167)
T ss_dssp CCCEEEEEEESSHHHHHHHH----CH-H---HHHHHHHHHHHHHTTTCCTTCEEEEEETTEEEEEE
T ss_pred CcEEEEEEechhhhHHHhhc----Cc-H---HHHHHHHHHHHHHHHhcCCCCEEEeecCceEEEEc
Confidence 35899999999999998764 11 1 22334444444443321113344557788887755
No 16
>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A*
Probab=31.39 E-value=2.6e+02 Score=24.31 Aligned_cols=58 Identities=10% Similarity=0.112 Sum_probs=33.7
Q ss_pred ceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccC-CCCeEEEeEecceEEEEe
Q psy16759 231 NCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPK-FSSIEKIKTIGSTYMLAS 296 (512)
Q Consensus 231 ~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~-~~~~~kiK~iGd~ymaa~ 296 (512)
...++++.||.+|..+.+.. ... .-++++..+-+.+.+.- -.+...-.+-||.++++.
T Consensus 60 ~~~~l~~idid~f~~in~~~----G~~----~gd~~L~~ia~~L~~~~~~~~~~~~R~~~d~F~il~ 118 (206)
T 3i5c_A 60 SQLSLLMIDVDYFKSYNDTF----GHV----AGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVL 118 (206)
T ss_dssp CCEEEEEEEETTHHHHHHHH----CHH----HHHHHHHHHHHHHHTTCCSTTCEEEEEETTEEEEEE
T ss_pred CcEEEEEEECcchhHHHhcc----Chh----HHHHHHHHHHHHHHHhcCCCCcEEEEecCCeEEEEE
Confidence 46899999999999998764 221 12333344444443210 013333457788887764
No 17
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=30.42 E-value=2.4e+02 Score=23.66 Aligned_cols=58 Identities=17% Similarity=0.186 Sum_probs=34.0
Q ss_pred ceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEe
Q psy16759 231 NCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLAS 296 (512)
Q Consensus 231 ~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~ 296 (512)
...++++.||.+|..+.+.. .....=++|.++-..+.+.+.. +...-.+-||.++.+.
T Consensus 29 ~~~~l~~i~id~f~~in~~~----G~~~gd~~L~~~a~~L~~~~~~----~~~~~R~~~d~F~ill 86 (171)
T 3icl_A 29 NPVVLLFLDVDNFKSINDSL----GHLVGDRLLRATAERIRTAVRD----GDTVARIGGDKFTILL 86 (171)
T ss_dssp SCCEEEEEEETTHHHHHHHH----CHHHHHHHHHHHHHHHHHHSCT----TCEEEEETTTEEEEEE
T ss_pred CcEEEEEEEChHhhHHHHHh----ChHHHHHHHHHHHHHHHHhcCC----CCEEEEecCCEEEEEe
Confidence 35889999999999998764 2222222333333334444433 3334456688887764
No 18
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=30.04 E-value=1.2e+02 Score=29.65 Aligned_cols=62 Identities=15% Similarity=0.101 Sum_probs=49.1
Q ss_pred cceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEeC
Q psy16759 230 YNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLASG 297 (512)
Q Consensus 230 ~~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~G 297 (512)
...|+|.-.||.++|..+.+. .++-+.-....+++..+-+.+.++ ++--.-.=||-||+++.
T Consensus 129 dsqIaVahiDI~d~t~~~t~~---~s~yd~~~~~l~l~~~Ll~y~~~i---gG~lf~iGgdny~iftt 190 (268)
T 2qv6_A 129 DGYVQIAHIDINNITGTLTDI---VSAYDTYLNVNKVKLALMEELLKY---NALLFFIGGDNFMAPSN 190 (268)
T ss_dssp SCCEEEEEEEETTHHHHTTTT---SCHHHHHHHHHHHHHHHHHHHHTT---TCCCEEEETTEEEEECT
T ss_pred cCceEEEEEEecCcccccccc---CChHHHHHHHHHHHHHHHHHHHHh---CCEEEEECCCEEEEEeC
Confidence 468999999999999854432 478888888888888888888877 55555566788999876
No 19
>3ezu_A Ggdef domain protein; multidomain protein of unknown function with GG domain, structural genomics, joint center for structural GE JCSG; 1.95A {Geobacter sulfurreducens}
Probab=20.09 E-value=6.1e+02 Score=24.69 Aligned_cols=58 Identities=19% Similarity=0.244 Sum_probs=31.1
Q ss_pred ceEEEEEEecCchhhhhhhcccccChHHHHHHHHHHHHHHHHHhcccCCCCeEEEeEecceEEEEe
Q psy16759 231 NCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIKTIGSTYMLAS 296 (512)
Q Consensus 231 ~~VtVmFadI~~Ft~~~~~~~~~~~~~~~~~lLn~~~~~fd~li~~~~~~~~~kiK~iGd~ymaa~ 296 (512)
...++++.||.+|..+.+.... ..+.++++.+-+. +.+.+.. +...-.+=||.++.+.
T Consensus 212 ~~~all~idId~fk~INd~~G~-~~gD~lL~~va~~---L~~~~~~----~d~v~R~ggdeF~ill 269 (342)
T 3ezu_A 212 SNVGIMLIDLDYFKLVGDNYGH-QTGDRILQLVAET---ITSHLRR----SDVVGRYDGDEFVVYL 269 (342)
T ss_dssp CEEEEEEEEEEECCCCC------CHHHHHHHHHHHH---HHHTCCT----TCEEEECSSSEEEEEE
T ss_pred CcEEEEEEECCcHHHHHHhhCh-HHHHHHHHHHHHH---HHHHCCC----CcEEEEEcCCEEEEEE
Confidence 4689999999999998876422 2333443333332 2233322 3333456677776654
Done!