RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16759
         (512 letters)



>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 199

 Score = 78.0 bits (191), Expect = 3e-17
 Identities = 58/78 (74%), Positives = 64/78 (82%)

Query: 428 TGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMASGYDCK 487
            G+NHGPVIAGVIGAQKPQYDIW NTVNVASRMDS GV+ ++QVTE+T+ IL   GY C 
Sbjct: 120 VGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCT 179

Query: 488 CRGQIFVKGKGTLTTYFV 505
           CRG I VKGKG L TYFV
Sbjct: 180 CRGIINVKGKGDLKTYFV 197



 Score = 61.9 bits (149), Expect = 9e-12
 Identities = 55/74 (74%), Positives = 64/74 (86%)

Query: 227 HERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDKLLLKPKFSSIEKIK 286
           H+ Y+C+ VMFASIP++KEFY E+DVNK+GLECLRLLNEII DFD LL KPKFS +EKIK
Sbjct: 1   HQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIK 60

Query: 287 TIGSTYMLASGLRP 300
           TIGSTYM A+GL  
Sbjct: 61  TIGSTYMAATGLSA 74


>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
           familiaris) [TaxId: 9615]}
          Length = 190

 Score = 56.1 bits (134), Expect = 7e-10
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 428 TGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKILMAS-GYDC 486
            G++ G V  GV+G +K Q+D+WSN V +A+ M++ G  GR+ +T+ T   L      + 
Sbjct: 110 VGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEVEP 169

Query: 487 KCRGQIFVKGK-GTLTTYFV 505
            C G+     K  ++ T+ +
Sbjct: 170 GCGGERNAYLKEHSIETFLI 189



 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 223 QDLYHERYNCIGVMFASIPNYKEFYDENDVNKQGLECLRLLNEIICDFDK 272
             +Y ++++ + ++FA I  +     +        E +  LNE+   FDK
Sbjct: 5   HKIYIQKHDNVSILFADIEGFTSLASQCTAQ----ELVMTLNELFARFDK 50


>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase
           {Trypanosome (Trypanosoma brucei), different isoform
           [TaxId: 5691]}
          Length = 235

 Score = 55.0 bits (131), Expect = 4e-09
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 424 ICVLTGLNHGPVIAGVIGAQKPQYDIWSNTVNVASRMDSCGVVGRLQVTEDTAKIL---M 480
           + V  G++ G             YD +  T N+A+R +S    G++ +T      L    
Sbjct: 132 LRVRVGIHTGLCDIRHDEV-TKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAED 190

Query: 481 ASGYDCKCRGQIFVKGKGT-LTTYFV 505
               D    G + ++G    +  Y +
Sbjct: 191 RKQIDVTALGDVALRGVSDPVKMYQL 216


>d1ny9a_ a.181.1.1 (A:) Transcriptional activator TipA-S
           {Streptomyces lividans [TaxId: 1916]}
          Length = 94

 Score = 28.6 bits (64), Expect = 0.57
 Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 14/79 (17%)

Query: 178 WQAKLKVEQDDVETMRGINKILLENILPAH------VAQHFLH-SSSSSRVTQDLYHERY 230
           WQ +++ E D++   R    ++                 H    + +         +E +
Sbjct: 1   WQ-RIQDEADEL--TRRFVALMDAGEPADSEGAMDAAEDHRQGIARNHYDCG----YEMH 53

Query: 231 NCIGVMFASIPNYKEFYDE 249
            C+G M+ S   +    D 
Sbjct: 54  TCLGEMYVSDERFTRNIDA 72


>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida
           cylindracea, cholesterol esterase [TaxId: 44322]}
          Length = 534

 Score = 27.0 bits (58), Expect = 6.4
 Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 1/54 (1%)

Query: 2   IYRNSNNTDDLN-PVFLWFKDGAHELGFRHFPDPQYRFYVSLTVGLLVIVTTYM 54
           + R        N PV LW   G  E+G      P      S+ +G  +I     
Sbjct: 102 VVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVN 155


>d1keaa_ a.96.1.2 (A:) Thymine-DNA glycosylase {Archaeon
          Methanobacterium thermoformicicum [TaxId: 145262]}
          Length = 217

 Score = 26.5 bits (57), Expect = 6.9
 Identities = 5/29 (17%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 13 NPVFLWFKDGAHELGFRHFPDPQYRFYVS 41
          + +  ++     +  +RH  DP Y   ++
Sbjct: 12 STILTFWNTDRRDFPWRHTRDP-YVILIT 39


>d1my6a1 a.2.11.1 (A:1-88) Fe superoxide dismutase (FeSOD)
           {Thermosynechococcus elongatus [TaxId: 146786]}
          Length = 88

 Score = 25.0 bits (54), Expect = 7.3
 Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 138 PYRYDDL-PYQLTTWFPILILIILFHILDRQMEFTARTDFLWQAKLKVEQDDVETMRGIN 196
           P+    L PY ++         + FH       +    + L Q     ++   + +R   
Sbjct: 8   PFDPGALEPYGMSA------KTLEFHYGKHHKGYVDNLNKLTQDTELADKSLEDVIRTTY 61

Query: 197 KILLENILPAHVAQHFLHS 215
               +  +  + AQ + H+
Sbjct: 62  GDAAKVGIFNNAAQVWNHT 80


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.140    0.421 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,883,030
Number of extensions: 86027
Number of successful extensions: 193
Number of sequences better than 10.0: 1
Number of HSP's gapped: 191
Number of HSP's successfully gapped: 15
Length of query: 512
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 423
Effective length of database: 1,185,626
Effective search space: 501519798
Effective search space used: 501519798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.4 bits)