Query psy16770
Match_columns 554
No_of_seqs 445 out of 3821
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 21:36:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16770.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16770hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 1.3E-47 4.4E-52 437.4 23.6 413 15-479 17-442 (780)
2 3us3_A Calsequestrin-1; calciu 100.0 4.2E-39 1.4E-43 335.1 26.0 324 127-482 13-354 (367)
3 1sji_A Calsequestrin 2, calseq 100.0 1.9E-37 6.4E-42 320.8 28.4 319 127-479 11-349 (350)
4 3apq_A DNAJ homolog subfamily 100.0 2E-38 7E-43 304.2 12.2 202 19-239 2-204 (210)
5 2r2j_A Thioredoxin domain-cont 100.0 9.2E-37 3.2E-41 319.3 24.5 333 127-493 5-346 (382)
6 3f8u_A Protein disulfide-isome 100.0 1.8E-36 6.1E-41 326.8 26.2 351 128-508 2-366 (481)
7 2b5e_A Protein disulfide-isome 100.0 2.5E-34 8.6E-39 311.7 18.7 343 127-506 14-370 (504)
8 3ed3_A Protein disulfide-isome 100.0 8.1E-28 2.8E-32 242.5 20.0 223 124-361 14-281 (298)
9 3apo_A DNAJ homolog subfamily 99.9 6.1E-25 2.1E-29 250.3 33.4 320 127-477 440-768 (780)
10 3idv_A Protein disulfide-isome 99.9 2.4E-24 8.3E-29 209.8 17.0 209 126-350 14-238 (241)
11 3q6o_A Sulfhydryl oxidase 1; p 99.9 7.4E-23 2.5E-27 200.4 19.1 206 127-345 12-236 (244)
12 3t58_A Sulfhydryl oxidase 1; o 99.9 6.2E-21 2.1E-25 205.6 19.2 188 127-324 12-217 (519)
13 2h8l_A Protein disulfide-isome 99.8 1.9E-19 6.6E-24 176.9 19.9 236 234-497 2-251 (252)
14 3ec3_A Protein disulfide-isome 99.8 2E-19 7E-24 176.5 19.9 232 235-496 3-248 (250)
15 1hdj_A Human HSP40, HDJ-1; mol 99.8 1.9E-20 6.7E-25 148.9 7.8 70 18-87 2-71 (77)
16 2ctp_A DNAJ homolog subfamily 99.8 1.8E-20 6.3E-25 149.4 7.7 73 15-87 3-75 (78)
17 2ctr_A DNAJ homolog subfamily 99.8 2.1E-20 7.1E-25 152.5 5.8 73 15-87 3-75 (88)
18 2dn9_A DNAJ homolog subfamily 99.8 5.7E-20 2E-24 147.0 8.1 73 15-87 3-76 (79)
19 2cug_A Mkiaa0962 protein; DNAJ 99.8 5.3E-20 1.8E-24 150.1 7.8 73 15-87 13-85 (88)
20 2ej7_A HCG3 gene; HCG3 protein 99.8 9.6E-20 3.3E-24 146.7 7.2 73 15-87 5-79 (82)
21 1bq0_A DNAJ, HSP40; chaperone, 99.8 7.1E-20 2.4E-24 154.0 5.7 70 18-87 2-72 (103)
22 2och_A Hypothetical protein DN 99.8 2E-19 6.9E-24 141.3 7.4 67 17-85 6-72 (73)
23 3zzx_A Thioredoxin; oxidoreduc 99.8 2.3E-19 7.7E-24 151.9 8.2 98 133-235 7-104 (105)
24 2dmx_A DNAJ homolog subfamily 99.8 2.4E-19 8.1E-24 147.7 7.5 73 15-87 5-79 (92)
25 1a8l_A Protein disulfide oxido 99.8 2.5E-18 8.4E-23 165.8 13.7 188 146-346 21-223 (226)
26 3h79_A Thioredoxin-like protei 99.8 9.4E-19 3.2E-23 153.1 9.7 105 127-235 15-126 (127)
27 2yua_A Williams-beuren syndrom 99.8 6.5E-19 2.2E-23 146.9 8.1 71 16-86 14-85 (99)
28 2ywm_A Glutaredoxin-like prote 99.8 8.2E-18 2.8E-22 162.5 16.6 183 147-346 20-217 (229)
29 1wjz_A 1700030A21RIK protein; 99.8 5.5E-19 1.9E-23 146.2 5.8 71 16-86 13-90 (94)
30 2ctw_A DNAJ homolog subfamily 99.8 1.1E-18 3.7E-23 148.1 7.7 73 15-87 13-86 (109)
31 2ctq_A DNAJ homolog subfamily 99.8 6E-19 2.1E-23 150.5 6.1 72 16-87 17-89 (112)
32 2lgw_A DNAJ homolog subfamily 99.8 5.7E-19 1.9E-23 146.8 5.4 69 19-87 2-72 (99)
33 3uem_A Protein disulfide-isome 99.7 1.6E-17 5.4E-22 171.9 16.2 210 127-348 117-356 (361)
34 2qsi_A Putative hydrogenase ex 99.7 1.9E-18 6.3E-23 151.5 7.7 103 130-236 18-122 (137)
35 2o37_A Protein SIS1; HSP40, J- 99.7 5.9E-19 2E-23 145.1 4.0 69 17-87 6-74 (92)
36 2voc_A Thioredoxin; electron t 99.7 6.2E-18 2.1E-22 144.4 9.7 105 129-239 3-107 (112)
37 3gnj_A Thioredoxin domain prot 99.7 4.8E-18 1.6E-22 144.3 8.4 105 128-236 5-109 (111)
38 2trx_A Thioredoxin; electron t 99.7 7.8E-18 2.7E-22 142.3 9.4 106 127-236 2-107 (108)
39 3uvt_A Thioredoxin domain-cont 99.7 7.4E-18 2.5E-22 143.0 9.1 104 127-235 5-110 (111)
40 2qgv_A Hydrogenase-1 operon pr 99.7 1.9E-18 6.6E-23 151.9 5.3 106 128-238 18-126 (140)
41 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 2.4E-18 8.3E-23 146.2 4.5 70 16-85 12-86 (109)
42 2i4a_A Thioredoxin; acidophIle 99.7 2E-17 6.7E-22 139.4 10.0 104 128-235 3-106 (107)
43 4euy_A Uncharacterized protein 99.7 1.3E-17 4.3E-22 140.7 8.7 98 133-236 7-104 (105)
44 1x5d_A Protein disulfide-isome 99.7 1.5E-17 5.2E-22 146.1 9.2 107 127-237 7-117 (133)
45 3die_A Thioredoxin, TRX; elect 99.7 2.4E-17 8.1E-22 138.6 9.6 103 128-236 4-106 (106)
46 1w4v_A Thioredoxin, mitochondr 99.7 2.2E-17 7.4E-22 142.7 9.1 107 126-236 12-118 (119)
47 2ys8_A RAB-related GTP-binding 99.7 5.4E-18 1.9E-22 138.6 4.8 63 17-79 25-87 (90)
48 3qfa_C Thioredoxin; protein-pr 99.7 1.6E-17 5.4E-22 143.0 7.9 104 128-236 13-116 (116)
49 3tco_A Thioredoxin (TRXA-1); d 99.7 2E-17 7E-22 139.6 8.4 104 128-236 5-108 (109)
50 1thx_A Thioredoxin, thioredoxi 99.7 3.7E-17 1.3E-21 139.5 10.1 107 127-237 7-113 (115)
51 2dj1_A Protein disulfide-isome 99.7 1.9E-17 6.5E-22 147.0 8.4 108 127-239 17-126 (140)
52 1t00_A Thioredoxin, TRX; redox 99.7 2.9E-17 1E-21 139.8 9.1 106 128-237 6-111 (112)
53 1nsw_A Thioredoxin, TRX; therm 99.7 2.6E-17 9.1E-22 138.3 8.5 103 129-236 2-104 (105)
54 1dby_A Chloroplast thioredoxin 99.7 4E-17 1.4E-21 137.6 9.7 104 129-236 3-106 (107)
55 2dml_A Protein disulfide-isome 99.7 4.1E-17 1.4E-21 142.9 9.7 105 128-236 18-123 (130)
56 3qou_A Protein YBBN; thioredox 99.7 3.7E-17 1.3E-21 163.5 10.6 111 126-239 6-116 (287)
57 3hz4_A Thioredoxin; NYSGXRC, P 99.7 2.2E-17 7.6E-22 147.0 8.0 108 127-238 6-113 (140)
58 2o8v_B Thioredoxin 1; disulfid 99.7 2.1E-17 7.3E-22 144.9 7.3 106 127-236 22-127 (128)
59 2yzu_A Thioredoxin; redox prot 99.7 3.2E-17 1.1E-21 138.3 8.1 106 128-238 2-107 (109)
60 1mek_A Protein disulfide isome 99.7 1.4E-17 4.7E-22 143.2 5.9 109 127-239 7-119 (120)
61 2ppt_A Thioredoxin-2; thiredox 99.7 3.4E-17 1.2E-21 148.6 8.7 106 128-238 48-153 (155)
62 1fb6_A Thioredoxin M; electron 99.7 7.8E-17 2.7E-21 135.2 9.7 104 129-236 2-105 (105)
63 3p2a_A Thioredoxin 2, putative 99.7 6.1E-17 2.1E-21 145.4 9.6 106 127-237 38-143 (148)
64 2l5l_A Thioredoxin; structural 99.7 6.5E-17 2.2E-21 143.2 9.7 109 128-239 10-128 (136)
65 2i1u_A Thioredoxin, TRX, MPT46 99.7 5.1E-17 1.7E-21 140.2 8.7 108 126-237 11-118 (121)
66 2e0q_A Thioredoxin; electron t 99.7 3.9E-17 1.3E-21 136.4 7.6 103 129-237 1-103 (104)
67 4f9z_D Endoplasmic reticulum r 99.7 1.5E-15 5.3E-20 146.6 19.9 207 241-478 12-227 (227)
68 3d6i_A Monothiol glutaredoxin- 99.7 5.2E-17 1.8E-21 138.3 8.3 106 129-236 2-108 (112)
69 3ga4_A Dolichyl-diphosphooligo 99.7 6.4E-17 2.2E-21 148.7 9.4 118 127-248 18-163 (178)
70 3f3q_A Thioredoxin-1; His TAG, 99.7 8.9E-17 3.1E-21 136.6 9.6 101 129-236 9-109 (109)
71 1x5e_A Thioredoxin domain cont 99.7 4.5E-17 1.5E-21 142.0 7.8 106 127-239 7-112 (126)
72 2av4_A Thioredoxin-like protei 99.7 1.8E-17 6.3E-22 147.4 5.0 105 129-236 23-138 (160)
73 3hxs_A Thioredoxin, TRXP; elec 99.7 1.2E-16 4E-21 142.1 10.2 108 127-237 22-139 (141)
74 3lz8_A Putative chaperone DNAJ 99.7 5.4E-18 1.8E-22 171.3 0.9 70 17-86 26-95 (329)
75 2dj0_A Thioredoxin-related tra 99.7 9.9E-18 3.4E-22 148.6 2.4 105 127-233 7-117 (137)
76 1gh6_A Large T antigen; tumor 99.7 7.6E-18 2.6E-22 143.1 1.3 67 18-87 7-75 (114)
77 1oaz_A Thioredoxin 1; immune s 99.7 3.8E-17 1.3E-21 142.2 5.3 105 128-236 4-122 (123)
78 2dj3_A Protein disulfide-isome 99.7 5E-17 1.7E-21 143.0 5.9 110 127-239 7-120 (133)
79 2l6l_A DNAJ homolog subfamily 99.7 4.9E-17 1.7E-21 147.2 5.9 71 15-85 6-83 (155)
80 3ul3_B Thioredoxin, thioredoxi 99.7 2.4E-16 8.1E-21 138.0 9.8 88 145-234 40-127 (128)
81 2pu9_C TRX-F, thioredoxin F-ty 99.7 2.2E-16 7.7E-21 134.2 9.1 103 128-235 6-109 (111)
82 1r26_A Thioredoxin; redox-acti 99.7 1.2E-16 4.1E-21 139.5 7.3 102 129-237 21-123 (125)
83 1xwb_A Thioredoxin; dimerizati 99.7 2.4E-16 8.2E-21 132.4 8.8 104 129-236 2-106 (106)
84 2wz9_A Glutaredoxin-3; protein 99.7 1.6E-16 5.4E-21 143.7 8.2 121 128-253 13-140 (153)
85 1gh2_A Thioredoxin-like protei 99.7 1.7E-16 5.8E-21 134.0 7.9 99 133-236 8-106 (107)
86 2l57_A Uncharacterized protein 99.6 5E-16 1.7E-20 135.3 11.0 110 128-239 5-119 (126)
87 1syr_A Thioredoxin; SGPP, stru 99.6 1.5E-16 5E-21 135.8 7.2 104 126-236 8-111 (112)
88 3aps_A DNAJ homolog subfamily 99.6 6.7E-17 2.3E-21 139.9 5.0 106 128-237 4-113 (122)
89 2l6c_A Thioredoxin; oxidoreduc 99.6 1.9E-16 6.4E-21 134.8 7.7 104 129-239 5-108 (110)
90 2xc2_A Thioredoxinn; oxidoredu 99.6 2.2E-16 7.5E-21 135.7 8.2 103 128-236 14-117 (117)
91 3uem_A Protein disulfide-isome 99.6 2.6E-15 8.8E-20 155.2 17.5 244 234-507 13-262 (361)
92 1ep7_A Thioredoxin CH1, H-type 99.6 1.8E-16 6.2E-21 134.8 7.2 105 129-236 4-110 (112)
93 3m9j_A Thioredoxin; oxidoreduc 99.6 2.6E-16 8.9E-21 132.0 8.1 99 133-236 7-105 (105)
94 3dxb_A Thioredoxin N-terminall 99.6 2E-16 7E-21 152.3 8.2 108 128-239 13-120 (222)
95 1v98_A Thioredoxin; oxidoreduc 99.6 5E-16 1.7E-20 138.1 9.9 106 127-237 33-138 (140)
96 2vlu_A Thioredoxin, thioredoxi 99.6 3E-16 1E-20 135.7 7.7 106 128-237 14-120 (122)
97 3evi_A Phosducin-like protein 99.6 2.4E-16 8.3E-21 135.9 6.8 101 128-234 4-111 (118)
98 2djj_A PDI, protein disulfide- 99.6 2.4E-16 8E-21 136.1 6.8 107 127-239 7-119 (121)
99 1faf_A Large T antigen; J doma 99.6 1.3E-16 4.4E-21 126.8 4.3 64 18-85 10-75 (79)
100 2vim_A Thioredoxin, TRX; thior 99.6 5.8E-16 2E-20 129.5 8.4 101 131-236 3-104 (104)
101 1faa_A Thioredoxin F; electron 99.6 6.9E-16 2.4E-20 133.9 9.1 105 127-236 18-123 (124)
102 3emx_A Thioredoxin; structural 99.6 2.5E-16 8.4E-21 139.3 6.2 104 127-239 16-128 (135)
103 2j23_A Thioredoxin; immune pro 99.6 3.6E-16 1.2E-20 135.4 6.8 103 129-236 17-120 (121)
104 1xfl_A Thioredoxin H1; AT3G510 99.6 7.2E-16 2.5E-20 134.3 8.5 105 128-236 17-123 (124)
105 3hho_A CO-chaperone protein HS 99.6 2.4E-16 8.3E-21 144.8 5.6 69 17-85 2-78 (174)
106 2es7_A Q8ZP25_salty, putative 99.6 2.8E-16 9.7E-21 140.2 5.8 106 128-239 18-127 (142)
107 2pf4_E Small T antigen; PP2A, 99.6 3.7E-17 1.3E-21 148.3 -0.1 68 17-87 9-78 (174)
108 3idv_A Protein disulfide-isome 99.6 7.9E-16 2.7E-20 149.3 8.9 108 127-239 130-239 (241)
109 2oe3_A Thioredoxin-3; electron 99.6 6.8E-16 2.3E-20 132.3 7.4 99 129-234 14-113 (114)
110 2c0g_A ERP29 homolog, windbeut 99.6 1.4E-15 4.9E-20 147.8 10.5 102 126-237 15-132 (248)
111 3gix_A Thioredoxin-like protei 99.6 5.6E-16 1.9E-20 139.6 6.2 102 132-236 9-120 (149)
112 1zma_A Bacterocin transport ac 99.6 2.1E-16 7.1E-21 136.1 3.1 103 126-233 11-117 (118)
113 1iur_A KIAA0730 protein; DNAJ 99.6 1.3E-16 4.3E-21 129.1 1.0 63 16-78 13-77 (88)
114 1n4c_A Auxilin; four helix bun 99.6 5.2E-16 1.8E-20 141.6 5.1 66 15-80 113-182 (182)
115 2qwo_B Putative tyrosine-prote 99.6 6.3E-16 2.2E-20 125.2 4.7 56 18-73 32-91 (92)
116 2yj7_A LPBCA thioredoxin; oxid 99.4 1.2E-16 4E-21 134.0 0.0 103 129-235 3-105 (106)
117 1fpo_A HSC20, chaperone protei 99.6 6.3E-16 2.2E-20 141.5 4.7 67 19-85 1-75 (171)
118 2vm1_A Thioredoxin, thioredoxi 99.6 2E-15 6.8E-20 129.4 7.0 107 129-239 8-116 (118)
119 2f51_A Thioredoxin; electron t 99.6 1.8E-15 6.2E-20 130.4 6.7 101 133-239 11-115 (118)
120 3cxg_A Putative thioredoxin; m 99.6 2.3E-15 7.9E-20 132.7 7.1 104 128-237 21-129 (133)
121 3bvo_A CO-chaperone protein HS 99.6 1.4E-15 4.7E-20 143.3 5.7 68 16-83 40-115 (207)
122 2dbc_A PDCL2, unnamed protein 99.6 1.7E-15 5.8E-20 134.0 5.9 102 128-235 11-119 (135)
123 1ti3_A Thioredoxin H, PTTRXH1; 99.6 2.2E-15 7.5E-20 128.1 6.0 104 129-236 6-111 (113)
124 1qgv_A Spliceosomal protein U5 99.6 2.1E-15 7.3E-20 134.6 5.8 100 133-235 10-119 (142)
125 2hls_A Protein disulfide oxido 99.6 7.2E-14 2.5E-18 136.3 16.9 183 146-347 24-224 (243)
126 3ag7_A Putative uncharacterize 99.5 1E-15 3.4E-20 128.4 2.5 60 15-75 37-104 (106)
127 3d22_A TRXH4, thioredoxin H-ty 99.5 2.2E-15 7.5E-20 133.5 4.9 105 129-237 26-132 (139)
128 2qc7_A ERP31, ERP28, endoplasm 99.5 7.7E-15 2.6E-19 142.2 9.1 101 127-236 5-118 (240)
129 1a8l_A Protein disulfide oxido 99.5 1.3E-14 4.5E-19 139.5 9.0 105 128-236 117-225 (226)
130 3uo3_A J-type CO-chaperone JAC 99.5 3.4E-15 1.2E-19 137.6 3.8 69 14-84 6-81 (181)
131 2guz_A Mitochondrial import in 99.5 2.3E-15 7.8E-20 117.1 1.8 57 18-77 13-70 (71)
132 4f9z_D Endoplasmic reticulum r 99.5 2.9E-13 1E-17 130.5 17.0 201 128-346 10-222 (227)
133 2trc_P Phosducin, MEKA, PP33; 99.5 4.7E-15 1.6E-19 141.9 3.6 104 128-235 100-211 (217)
134 2kuc_A Putative disulphide-iso 99.5 8E-15 2.7E-19 128.2 4.5 109 129-239 8-123 (130)
135 1wmj_A Thioredoxin H-type; str 99.5 4.1E-15 1.4E-19 129.9 2.4 108 128-239 15-124 (130)
136 1fo5_A Thioredoxin; disulfide 99.5 5.3E-14 1.8E-18 113.0 7.3 83 148-236 3-85 (85)
137 3fk8_A Disulphide isomerase; A 99.5 5.6E-14 1.9E-18 123.4 7.8 88 146-235 28-131 (133)
138 1a0r_P Phosducin, MEKA, PP33; 99.5 2E-14 6.7E-19 139.6 4.6 104 128-235 113-224 (245)
139 1nho_A Probable thioredoxin; b 99.4 7.3E-14 2.5E-18 112.2 6.1 82 149-236 3-84 (85)
140 2fwh_A Thiol:disulfide interch 99.4 3.9E-14 1.3E-18 124.9 4.2 103 133-239 18-130 (134)
141 1wou_A Thioredoxin -related pr 99.4 9.3E-14 3.2E-18 120.5 6.4 102 129-234 7-122 (123)
142 3f8u_A Protein disulfide-isome 99.4 1.9E-11 6.4E-16 131.1 23.8 309 129-480 112-465 (481)
143 3qcp_A QSOX from trypanosoma b 99.4 2.1E-14 7E-19 151.1 0.6 106 127-236 23-138 (470)
144 2b5e_A Protein disulfide-isome 99.4 1.2E-13 4.1E-18 149.2 4.9 107 127-239 358-469 (504)
145 2ywm_A Glutaredoxin-like prote 99.4 4.7E-13 1.6E-17 129.0 7.7 100 128-236 119-219 (229)
146 3kp8_A Vkorc1/thioredoxin doma 99.4 1.5E-13 5.1E-18 116.1 3.4 76 147-235 12-93 (106)
147 2hls_A Protein disulfide oxido 99.4 1.4E-12 4.6E-17 127.2 10.7 88 147-239 138-228 (243)
148 1ilo_A Conserved hypothetical 99.4 2.2E-12 7.7E-17 101.5 8.8 73 151-232 3-76 (77)
149 2lst_A Thioredoxin; structural 99.0 7.7E-14 2.6E-18 121.9 0.0 92 145-238 17-117 (130)
150 3iv4_A Putative oxidoreductase 99.3 4.5E-13 1.5E-17 112.6 4.4 94 133-232 13-111 (112)
151 2djk_A PDI, protein disulfide- 99.3 3.4E-13 1.1E-17 118.8 3.1 105 129-239 8-117 (133)
152 3f9u_A Putative exported cytoc 99.3 5.5E-13 1.9E-17 122.6 2.7 105 130-236 29-165 (172)
153 2ju5_A Thioredoxin disulfide i 99.3 3.1E-12 1.1E-16 115.5 7.5 89 146-237 46-152 (154)
154 1lu4_A Soluble secreted antige 99.3 7.9E-12 2.7E-16 109.3 9.7 87 146-236 23-135 (136)
155 3dml_A Putative uncharacterize 99.3 2.2E-13 7.5E-18 116.0 -0.7 90 146-236 17-109 (116)
156 3erw_A Sporulation thiol-disul 99.3 1.1E-11 3.8E-16 109.5 9.2 86 146-232 33-144 (145)
157 2f9s_A Thiol-disulfide oxidore 99.3 1.7E-11 5.9E-16 109.6 10.0 93 146-239 25-140 (151)
158 1zzo_A RV1677; thioredoxin fol 99.2 1.9E-11 6.4E-16 106.6 9.7 88 146-237 24-135 (136)
159 2lja_A Putative thiol-disulfid 99.2 2.9E-11 9.8E-16 108.1 11.0 93 146-239 29-145 (152)
160 2b5x_A YKUV protein, TRXY; thi 99.2 2E-11 6.8E-16 108.3 9.4 90 146-237 28-145 (148)
161 3hcz_A Possible thiol-disulfid 99.2 3.4E-11 1.2E-15 106.8 10.7 89 146-235 30-144 (148)
162 3or5_A Thiol:disulfide interch 99.2 3.5E-11 1.2E-15 109.0 10.7 92 146-238 33-152 (165)
163 3raz_A Thioredoxin-related pro 99.2 2.5E-11 8.4E-16 108.7 9.5 92 146-238 23-141 (151)
164 3us3_A Calsequestrin-1; calciu 99.2 2.5E-10 8.6E-15 118.0 17.5 204 128-347 126-346 (367)
165 3fkf_A Thiol-disulfide oxidore 99.2 5.8E-11 2E-15 105.3 10.6 88 146-237 32-146 (148)
166 2h30_A Thioredoxin, peptide me 99.2 1.2E-11 4.2E-16 112.1 6.2 92 146-238 37-157 (164)
167 1sji_A Calsequestrin 2, calseq 99.2 4.3E-10 1.5E-14 115.5 17.8 202 129-346 125-343 (350)
168 1sen_A Thioredoxin-like protei 99.2 2.1E-12 7E-17 118.1 -0.9 90 145-236 44-147 (164)
169 3eyt_A Uncharacterized protein 99.2 1E-10 3.5E-15 105.3 10.1 92 146-238 27-153 (158)
170 3lor_A Thiol-disulfide isomera 99.2 9.1E-11 3.1E-15 105.8 9.6 92 146-238 29-156 (160)
171 3gl3_A Putative thiol:disulfid 99.2 1E-10 3.5E-15 104.5 9.8 93 146-239 27-144 (152)
172 2l5o_A Putative thioredoxin; s 99.1 7.6E-11 2.6E-15 105.4 8.7 92 146-238 27-142 (153)
173 1z6n_A Hypothetical protein PA 99.1 2E-11 6.7E-16 111.7 4.5 98 129-233 38-139 (167)
174 3ia1_A THIO-disulfide isomeras 99.1 1.1E-10 3.8E-15 104.6 9.2 88 148-239 31-146 (154)
175 2fgx_A Putative thioredoxin; N 99.1 8.7E-11 3E-15 98.6 7.7 78 148-232 29-106 (107)
176 4evm_A Thioredoxin family prot 99.1 1.7E-10 5.8E-15 100.4 9.6 88 146-235 21-137 (138)
177 2lrn_A Thiol:disulfide interch 99.1 2.9E-10 9.9E-15 101.8 11.0 88 146-237 28-141 (152)
178 3ira_A Conserved protein; meth 99.1 2.1E-11 7.2E-16 111.8 2.6 81 133-218 28-120 (173)
179 3ph9_A Anterior gradient prote 99.1 8.3E-12 2.8E-16 112.1 -0.9 88 145-236 42-144 (151)
180 1ttz_A Conserved hypothetical 99.1 1.3E-10 4.5E-15 94.0 6.2 74 151-236 3-76 (87)
181 3kcm_A Thioredoxin family prot 99.1 3.9E-10 1.3E-14 100.8 9.4 91 146-237 27-143 (154)
182 3ha9_A Uncharacterized thiored 99.1 4.6E-10 1.6E-14 101.9 9.8 86 146-236 36-163 (165)
183 3lwa_A Secreted thiol-disulfid 99.1 3.2E-10 1.1E-14 104.9 8.8 90 146-236 58-180 (183)
184 2b1k_A Thiol:disulfide interch 99.1 2E-10 6.8E-15 104.6 7.1 86 146-236 50-159 (168)
185 3hdc_A Thioredoxin family prot 99.0 5.8E-10 2E-14 100.5 9.8 92 146-238 40-153 (158)
186 3eur_A Uncharacterized protein 99.0 2.8E-10 9.7E-15 100.6 7.4 83 147-233 31-141 (142)
187 2lrt_A Uncharacterized protein 99.0 6.7E-10 2.3E-14 99.7 9.8 85 147-232 35-143 (152)
188 3ewl_A Uncharacterized conserv 99.0 2.8E-10 9.6E-15 100.4 7.0 87 146-236 26-140 (142)
189 2h8l_A Protein disulfide-isome 99.0 5.2E-09 1.8E-13 102.3 16.6 195 129-347 8-228 (252)
190 3bj5_A Protein disulfide-isome 99.0 1.1E-09 3.9E-14 97.8 10.7 134 343-494 7-146 (147)
191 3ec3_A Protein disulfide-isome 99.0 6.2E-09 2.1E-13 101.6 16.4 195 129-347 8-226 (250)
192 3kp9_A Vkorc1/thioredoxin doma 99.0 1.1E-10 3.9E-15 115.4 3.7 74 150-236 200-279 (291)
193 1i5g_A Tryparedoxin II; electr 99.0 6.5E-10 2.2E-14 98.4 7.4 73 146-219 27-126 (144)
194 3fw2_A Thiol-disulfide oxidore 99.0 2.7E-09 9.1E-14 95.2 11.0 86 146-235 32-146 (150)
195 1o73_A Tryparedoxin; electron 99.0 8.5E-10 2.9E-14 97.5 7.5 74 146-220 27-127 (144)
196 3s9f_A Tryparedoxin; thioredox 99.0 7.1E-10 2.4E-14 101.1 7.1 74 146-220 47-147 (165)
197 3ed3_A Protein disulfide-isome 99.0 2.8E-08 9.5E-13 99.5 19.3 216 241-477 19-268 (298)
198 1o8x_A Tryparedoxin, TRYX, TXN 99.0 6.9E-10 2.4E-14 98.6 6.7 73 146-219 27-126 (146)
199 1kng_A Thiol:disulfide interch 99.0 8.9E-10 3E-14 98.6 7.2 87 146-236 41-151 (156)
200 1jfu_A Thiol:disulfide interch 98.9 2.6E-09 8.9E-14 98.9 9.7 92 146-238 59-181 (186)
201 2hyx_A Protein DIPZ; thioredox 98.9 1.7E-09 6E-14 110.5 8.8 90 146-236 81-198 (352)
202 4fo5_A Thioredoxin-like protei 98.9 2.7E-09 9.1E-14 94.4 8.7 84 146-233 31-141 (143)
203 3kh7_A Thiol:disulfide interch 98.9 2E-09 6.8E-14 99.1 8.1 86 146-236 57-166 (176)
204 2ywi_A Hypothetical conserved 98.9 1.4E-09 4.8E-14 101.6 7.2 88 149-237 48-174 (196)
205 2cvb_A Probable thiol-disulfid 98.9 4.3E-09 1.5E-13 97.7 8.2 89 147-238 33-160 (188)
206 1wjk_A C330018D20RIK protein; 98.8 2.3E-09 8E-14 89.1 5.6 81 146-237 14-96 (100)
207 2lus_A Thioredoxion; CR-Trp16, 98.3 4.9E-10 1.7E-14 98.8 0.0 74 147-221 25-127 (143)
208 3u5r_E Uncharacterized protein 98.8 1.2E-08 4.2E-13 97.3 9.7 90 147-238 58-188 (218)
209 2k8s_A Thioredoxin; dimer, str 98.8 1.4E-09 4.9E-14 86.3 2.6 73 151-228 4-77 (80)
210 2e7p_A Glutaredoxin; thioredox 98.8 1.1E-09 3.9E-14 93.2 1.9 79 148-235 20-106 (116)
211 2ls5_A Uncharacterized protein 98.3 7.2E-10 2.4E-14 99.9 0.0 88 146-235 32-146 (159)
212 2k6v_A Putative cytochrome C o 98.8 9.6E-09 3.3E-13 93.5 7.3 89 146-235 34-171 (172)
213 2r2j_A Thioredoxin domain-cont 98.7 1.1E-07 3.9E-12 98.5 15.5 194 129-347 120-327 (382)
214 2dlx_A UBX domain-containing p 98.7 9E-09 3.1E-13 92.3 6.2 98 136-236 30-135 (153)
215 2rli_A SCO2 protein homolog, m 98.7 1.8E-08 6.3E-13 91.6 8.3 90 146-236 25-163 (171)
216 3cmi_A Peroxiredoxin HYR1; thi 98.7 2.7E-08 9.2E-13 90.8 9.0 90 146-237 31-168 (171)
217 2y4t_A DNAJ homolog subfamily 98.7 7.7E-09 2.6E-13 108.1 6.0 67 16-82 379-449 (450)
218 2p5q_A Glutathione peroxidase 98.7 2.6E-08 8.7E-13 90.4 8.1 91 146-237 31-168 (170)
219 2vup_A Glutathione peroxidase- 98.7 4.6E-08 1.6E-12 91.0 9.9 90 146-236 47-184 (190)
220 3drn_A Peroxiredoxin, bacterio 98.7 3.8E-08 1.3E-12 88.9 8.8 87 147-234 28-146 (161)
221 1hyu_A AHPF, alkyl hydroperoxi 98.7 2.6E-08 8.9E-13 107.7 9.0 98 129-235 101-198 (521)
222 2djk_A PDI, protein disulfide- 98.7 3.3E-08 1.1E-12 86.5 8.1 128 347-493 3-132 (133)
223 2guz_B Mitochondrial import in 98.7 9.6E-09 3.3E-13 77.3 3.8 53 20-75 5-60 (65)
224 1ego_A Glutaredoxin; electron 98.7 2E-08 6.9E-13 80.2 5.9 74 151-235 3-82 (85)
225 3dwv_A Glutathione peroxidase- 98.7 9.6E-08 3.3E-12 88.6 11.3 92 146-238 45-184 (187)
226 2ggt_A SCO1 protein homolog, m 98.7 2.5E-08 8.5E-13 89.9 6.6 89 147-236 23-160 (164)
227 1zof_A Alkyl hydroperoxide-red 98.6 3.6E-08 1.2E-12 92.4 7.2 90 146-236 32-160 (198)
228 2bmx_A Alkyl hydroperoxidase C 98.6 5E-08 1.7E-12 91.2 8.1 90 147-237 45-170 (195)
229 2v1m_A Glutathione peroxidase; 98.6 6.5E-08 2.2E-12 87.6 8.6 90 146-236 30-166 (169)
230 1we0_A Alkyl hydroperoxide red 98.6 3.5E-08 1.2E-12 91.5 6.8 89 147-236 31-156 (187)
231 1xvw_A Hypothetical protein RV 98.6 6E-08 2E-12 87.2 8.1 86 148-234 37-157 (160)
232 2p31_A CL683, glutathione pero 98.6 5.9E-08 2E-12 89.6 7.6 90 146-236 48-180 (181)
233 2obi_A PHGPX, GPX-4, phospholi 98.6 1.2E-07 4.1E-12 87.5 8.2 89 146-235 46-182 (183)
234 3kij_A Probable glutathione pe 98.5 2E-07 6.9E-12 85.8 8.5 90 146-235 37-168 (180)
235 1qmv_A Human thioredoxin perox 98.5 1.6E-07 5.4E-12 87.9 7.4 89 147-236 34-162 (197)
236 2gs3_A PHGPX, GPX-4, phospholi 98.5 1.9E-07 6.4E-12 86.5 7.8 90 146-235 48-184 (185)
237 2f8a_A Glutathione peroxidase 98.5 2.1E-07 7E-12 88.1 7.7 44 146-189 46-89 (208)
238 1eej_A Thiol:disulfide interch 98.5 1.7E-07 5.9E-12 89.2 6.9 84 143-235 82-209 (216)
239 3gyk_A 27KDA outer membrane pr 98.4 3.8E-07 1.3E-11 83.4 8.1 85 144-236 19-172 (175)
240 2h01_A 2-Cys peroxiredoxin; th 98.4 3.4E-07 1.2E-11 85.2 7.8 88 147-235 31-157 (192)
241 1uul_A Tryparedoxin peroxidase 98.4 2.8E-07 9.7E-12 86.5 6.8 89 147-236 36-164 (202)
242 1zye_A Thioredoxin-dependent p 98.4 4.2E-07 1.5E-11 86.7 7.4 89 147-236 56-184 (220)
243 1t3b_A Thiol:disulfide interch 98.4 3.6E-07 1.2E-11 86.6 6.8 82 145-235 84-209 (211)
244 1xzo_A BSSCO, hypothetical pro 98.3 1.7E-06 5.8E-11 78.6 9.7 91 146-237 32-172 (174)
245 2i81_A 2-Cys peroxiredoxin; st 98.3 6.1E-07 2.1E-11 85.1 6.7 90 146-236 51-179 (213)
246 2l4c_A Endoplasmic reticulum r 98.3 1E-06 3.6E-11 75.9 7.5 105 232-348 13-123 (124)
247 1nm3_A Protein HI0572; hybrid, 98.3 3.5E-06 1.2E-10 81.3 12.2 148 147-318 33-225 (241)
248 2b7k_A SCO1 protein; metalloch 98.3 1.2E-06 3.9E-11 82.2 8.3 89 147-236 41-178 (200)
249 3ztl_A Thioredoxin peroxidase; 98.3 1.2E-06 4.1E-11 83.6 7.9 88 146-234 68-195 (222)
250 2jsy_A Probable thiol peroxida 98.3 1.9E-06 6.3E-11 78.0 8.8 86 147-235 44-165 (167)
251 1r7h_A NRDH-redoxin; thioredox 98.3 1.1E-06 3.9E-11 67.9 5.9 68 151-232 3-73 (75)
252 1h75_A Glutaredoxin-like prote 98.2 4.4E-07 1.5E-11 71.6 2.9 69 151-233 3-74 (81)
253 1xvq_A Thiol peroxidase; thior 98.2 4.7E-06 1.6E-10 76.2 9.9 87 147-237 44-168 (175)
254 2a4v_A Peroxiredoxin DOT5; yea 98.2 5.5E-06 1.9E-10 74.3 9.3 72 148-222 36-136 (159)
255 3gkn_A Bacterioferritin comigr 98.2 4E-06 1.4E-10 75.4 8.3 88 147-235 35-160 (163)
256 2i3y_A Epididymal secretory gl 98.2 8.1E-06 2.8E-10 77.4 10.6 43 146-189 55-97 (215)
257 3h93_A Thiol:disulfide interch 98.1 4.3E-06 1.5E-10 77.6 7.4 42 146-188 24-65 (192)
258 3hd5_A Thiol:disulfide interch 98.1 7.6E-06 2.6E-10 76.1 8.4 43 146-189 24-66 (195)
259 4g2e_A Peroxiredoxin; redox pr 98.1 3E-06 1E-10 76.1 5.3 88 147-234 30-155 (157)
260 2r37_A Glutathione peroxidase 98.1 1E-05 3.4E-10 76.3 8.9 43 146-189 37-79 (207)
261 1v58_A Thiol:disulfide interch 98.0 8.6E-06 2.9E-10 78.7 7.7 87 145-236 95-232 (241)
262 1kte_A Thioltransferase; redox 98.0 2.5E-06 8.5E-11 70.9 3.1 59 151-216 14-79 (105)
263 2c0d_A Thioredoxin peroxidase 98.0 8.7E-06 3E-10 77.6 7.0 89 146-235 55-182 (221)
264 2l4c_A Endoplasmic reticulum r 98.0 1.9E-05 6.4E-10 68.0 7.9 94 129-235 23-122 (124)
265 3ixr_A Bacterioferritin comigr 97.9 2.2E-05 7.5E-10 72.0 8.4 88 147-234 51-175 (179)
266 3q6o_A Sulfhydryl oxidase 1; p 97.9 0.00062 2.1E-08 65.4 18.8 206 241-476 14-240 (244)
267 1un2_A DSBA, thiol-disulfide i 97.9 2.9E-06 1E-10 79.3 1.9 55 135-191 102-159 (197)
268 2hze_A Glutaredoxin-1; thiored 97.9 9.2E-06 3.2E-10 68.7 4.8 57 150-216 20-86 (114)
269 2pn8_A Peroxiredoxin-4; thiore 97.9 1.9E-05 6.5E-10 74.6 7.4 88 147-235 48-175 (211)
270 3a2v_A Probable peroxiredoxin; 97.9 1E-05 3.5E-10 78.4 5.6 86 149-235 36-160 (249)
271 4gqc_A Thiol peroxidase, perox 97.9 7.9E-06 2.7E-10 74.0 4.2 90 146-235 32-158 (164)
272 3h79_A Thioredoxin-like protei 97.9 7.2E-05 2.5E-09 64.1 10.2 102 239-347 15-126 (127)
273 1n8j_A AHPC, alkyl hydroperoxi 97.9 2.2E-05 7.4E-10 72.5 7.2 90 147-236 30-155 (186)
274 3zzx_A Thioredoxin; oxidoreduc 97.9 7.4E-05 2.5E-09 62.1 9.8 96 244-348 6-105 (105)
275 3me7_A Putative uncharacterize 97.8 5.9E-05 2E-09 68.5 9.1 92 147-239 28-164 (170)
276 3ga4_A Dolichyl-diphosphooligo 97.8 8.7E-05 3E-09 67.8 9.7 112 230-347 10-151 (178)
277 2klx_A Glutaredoxin; thioredox 97.8 2.9E-05 9.8E-10 62.3 5.8 68 150-233 7-77 (89)
278 3qpm_A Peroxiredoxin; oxidored 97.8 4.8E-05 1.6E-09 73.3 7.9 88 147-235 77-204 (240)
279 2cq9_A GLRX2 protein, glutared 97.7 2.1E-05 7E-10 68.3 4.7 56 151-216 29-91 (130)
280 1psq_A Probable thiol peroxida 97.7 8.3E-05 2.8E-09 66.8 8.7 85 147-234 42-162 (163)
281 2ht9_A Glutaredoxin-2; thiored 97.7 2.6E-05 8.7E-10 69.2 4.4 56 151-216 51-113 (146)
282 2znm_A Thiol:disulfide interch 97.7 0.00014 4.8E-09 67.3 9.7 42 145-187 20-61 (195)
283 3ic4_A Glutaredoxin (GRX-1); s 97.7 4.1E-05 1.4E-09 61.7 5.1 69 151-233 14-91 (92)
284 3tjj_A Peroxiredoxin-4; thiore 97.7 7.5E-05 2.6E-09 72.6 7.8 88 147-235 91-218 (254)
285 1tp9_A Peroxiredoxin, PRX D (t 97.7 3.7E-05 1.3E-09 69.2 5.2 44 147-190 35-81 (162)
286 3qmx_A Glutaredoxin A, glutare 97.7 4.7E-05 1.6E-09 62.7 5.4 72 146-233 13-89 (99)
287 1fov_A Glutaredoxin 3, GRX3; a 97.7 5E-05 1.7E-09 59.5 5.2 68 151-234 3-74 (82)
288 2wfc_A Peroxiredoxin 5, PRDX5; 97.6 4.4E-05 1.5E-09 69.2 5.4 44 147-190 31-77 (167)
289 1q98_A Thiol peroxidase, TPX; 97.6 0.00017 5.9E-09 64.9 8.8 71 147-219 43-146 (165)
290 2qsi_A Putative hydrogenase ex 97.6 0.0002 6.7E-09 62.4 8.7 97 242-347 18-121 (137)
291 3c1r_A Glutaredoxin-1; oxidize 97.6 3.9E-05 1.3E-09 65.3 4.2 59 151-216 27-93 (118)
292 2yzh_A Probable thiol peroxida 97.6 8.6E-05 2.9E-09 67.3 6.7 52 147-200 47-102 (171)
293 1z6m_A Conserved hypothetical 97.6 0.00017 5.9E-09 65.5 8.7 43 144-187 24-68 (175)
294 2qgv_A Hydrogenase-1 operon pr 97.6 0.00011 3.7E-09 64.2 6.5 97 241-347 19-123 (140)
295 2yan_A Glutaredoxin-3; oxidore 97.5 6.2E-05 2.1E-09 62.5 4.5 65 151-231 19-92 (105)
296 3t58_A Sulfhydryl oxidase 1; o 97.5 0.0046 1.6E-07 66.2 19.8 167 241-420 14-201 (519)
297 3zrd_A Thiol peroxidase; oxido 97.5 0.00026 8.9E-09 66.1 8.8 71 146-218 77-180 (200)
298 3uma_A Hypothetical peroxiredo 97.5 8.7E-05 3E-09 68.4 5.3 42 149-190 59-102 (184)
299 2lqo_A Putative glutaredoxin R 97.5 0.00017 5.9E-09 58.4 6.4 75 150-237 5-84 (92)
300 3p7x_A Probable thiol peroxida 97.5 0.00016 5.4E-09 65.1 6.8 85 147-234 46-165 (166)
301 3gv1_A Disulfide interchange p 97.4 0.00017 5.8E-09 63.9 5.8 82 145-237 12-139 (147)
302 2khp_A Glutaredoxin; thioredox 97.4 0.00011 3.7E-09 59.2 4.1 56 150-215 7-66 (92)
303 3gnj_A Thioredoxin domain prot 97.4 0.0012 4.1E-08 54.4 10.6 97 241-346 6-107 (111)
304 3tco_A Thioredoxin (TRXA-1); d 97.4 0.0011 3.7E-08 54.3 10.1 96 241-346 6-106 (109)
305 3msz_A Glutaredoxin 1; alpha-b 97.4 0.00019 6.5E-09 57.1 5.1 75 149-237 4-87 (89)
306 2qc7_A ERP31, ERP28, endoplasm 97.4 0.0013 4.5E-08 63.1 11.9 101 241-348 7-118 (240)
307 2c0g_A ERP29 homolog, windbeut 97.3 0.0007 2.4E-08 65.3 9.7 100 240-347 17-130 (248)
308 2rem_A Disulfide oxidoreductas 97.3 0.00081 2.8E-08 61.9 9.7 42 146-188 24-65 (193)
309 2yzu_A Thioredoxin; redox prot 97.3 0.0014 4.8E-08 53.6 10.1 97 241-347 3-104 (109)
310 2es7_A Q8ZP25_salty, putative 97.3 0.0003 1E-08 61.9 6.1 105 241-356 19-132 (142)
311 1thx_A Thioredoxin, thioredoxi 97.3 0.0018 6E-08 53.7 10.6 101 236-346 5-110 (115)
312 2i4a_A Thioredoxin; acidophIle 97.3 0.0016 5.6E-08 53.1 10.1 98 241-347 4-106 (107)
313 3rhb_A ATGRXC5, glutaredoxin-C 97.3 0.00015 5.1E-09 61.0 3.7 56 151-216 21-84 (113)
314 2dml_A Protein disulfide-isome 97.3 0.0027 9.1E-08 54.1 11.7 98 241-346 19-121 (130)
315 4dvc_A Thiol:disulfide interch 97.3 0.00069 2.4E-08 61.6 8.4 40 146-186 20-59 (184)
316 3nzn_A Glutaredoxin; structura 97.2 0.00056 1.9E-08 56.4 6.8 71 149-232 22-101 (103)
317 3uvt_A Thioredoxin domain-cont 97.2 0.0021 7.1E-08 52.9 10.4 96 241-347 7-110 (111)
318 1nsw_A Thioredoxin, TRX; therm 97.2 0.002 6.8E-08 52.5 10.1 96 241-346 2-102 (105)
319 1prx_A HORF6; peroxiredoxin, h 97.2 0.00088 3E-08 63.7 9.0 87 149-235 34-167 (224)
320 3die_A Thioredoxin, TRX; elect 97.2 0.002 6.9E-08 52.4 10.1 96 241-347 5-105 (106)
321 1mek_A Protein disulfide isome 97.2 0.0017 5.8E-08 54.1 9.5 100 241-348 9-116 (120)
322 3p2a_A Thioredoxin 2, putative 97.2 0.0024 8.2E-08 55.9 10.8 96 241-346 40-140 (148)
323 2trx_A Thioredoxin; electron t 97.2 0.0024 8.2E-08 52.3 10.2 97 241-346 4-105 (108)
324 2e0q_A Thioredoxin; electron t 97.2 0.0021 7.1E-08 51.9 9.7 94 242-346 2-100 (104)
325 1w4v_A Thioredoxin, mitochondr 97.2 0.0021 7.3E-08 54.0 10.0 98 240-346 14-116 (119)
326 1x5d_A Protein disulfide-isome 97.2 0.0024 8.2E-08 54.5 10.5 98 241-347 9-115 (133)
327 2pwj_A Mitochondrial peroxired 97.2 0.00012 4.2E-09 66.5 2.1 57 148-205 45-107 (171)
328 2voc_A Thioredoxin; electron t 97.2 0.0018 6.3E-08 53.7 9.3 99 241-350 3-106 (112)
329 3apq_A DNAJ homolog subfamily 97.1 0.0016 5.5E-08 60.9 9.8 106 241-356 99-209 (210)
330 1fb6_A Thioredoxin M; electron 97.1 0.0026 8.9E-08 51.6 9.6 97 241-346 2-103 (105)
331 1dby_A Chloroplast thioredoxin 97.1 0.0026 9E-08 51.9 9.5 97 241-346 3-104 (107)
332 2dj1_A Protein disulfide-isome 97.1 0.0028 9.5E-08 54.7 10.1 96 241-347 19-122 (140)
333 2v2g_A Peroxiredoxin 6; oxidor 97.1 0.00067 2.3E-08 64.9 6.5 87 148-235 30-163 (233)
334 3qfa_C Thioredoxin; protein-pr 97.1 0.0038 1.3E-07 52.2 10.6 96 241-346 14-114 (116)
335 3hxs_A Thioredoxin, TRXP; elec 97.1 0.0043 1.5E-07 53.7 11.1 101 241-347 24-137 (141)
336 1xcc_A 1-Cys peroxiredoxin; un 97.1 0.0008 2.7E-08 63.8 6.8 87 149-235 34-164 (220)
337 3aps_A DNAJ homolog subfamily 97.0 0.0032 1.1E-07 52.9 9.8 99 241-346 5-110 (122)
338 3hz4_A Thioredoxin; NYSGXRC, P 97.0 0.0019 6.4E-08 56.2 8.5 99 240-347 7-110 (140)
339 1t00_A Thioredoxin, TRX; redox 97.0 0.0035 1.2E-07 51.7 9.8 97 241-346 7-108 (112)
340 1ep7_A Thioredoxin CH1, H-type 97.0 0.0033 1.1E-07 51.8 9.4 97 243-346 7-108 (112)
341 2i1u_A Thioredoxin, TRX, MPT46 97.0 0.0041 1.4E-07 52.0 10.2 98 241-347 14-116 (121)
342 2vlu_A Thioredoxin, thioredoxi 97.0 0.0038 1.3E-07 52.4 10.0 101 238-346 12-117 (122)
343 1xwb_A Thioredoxin; dimerizati 97.0 0.0049 1.7E-07 50.1 10.3 96 242-346 3-104 (106)
344 1x5e_A Thioredoxin domain cont 97.0 0.005 1.7E-07 52.1 10.5 100 241-353 9-114 (126)
345 1wik_A Thioredoxin-like protei 97.0 0.00075 2.6E-08 56.3 4.9 66 135-215 6-80 (109)
346 2ppt_A Thioredoxin-2; thiredox 96.9 0.0033 1.1E-07 55.8 9.4 96 241-346 49-149 (155)
347 2l5l_A Thioredoxin; structural 96.9 0.005 1.7E-07 53.1 10.3 101 241-347 11-124 (136)
348 2ec4_A FAS-associated factor 1 96.9 0.0032 1.1E-07 57.4 9.2 90 144-235 52-166 (178)
349 4euy_A Uncharacterized protein 96.9 0.0023 7.8E-08 52.4 7.4 93 245-347 7-103 (105)
350 2o8v_B Thioredoxin 1; disulfid 96.9 0.0034 1.2E-07 53.7 8.5 97 241-346 24-125 (128)
351 3m9j_A Thioredoxin; oxidoreduc 96.9 0.006 2E-07 49.5 9.6 94 243-346 5-103 (105)
352 1oaz_A Thioredoxin 1; immune s 96.9 0.0029 1E-07 53.7 8.0 98 241-347 5-121 (123)
353 4hde_A SCO1/SENC family lipopr 96.9 0.0028 9.4E-08 57.3 8.2 44 146-189 31-77 (170)
354 1syr_A Thioredoxin; SGPP, stru 96.8 0.0057 2E-07 50.6 9.6 96 241-347 11-110 (112)
355 3hz8_A Thiol:disulfide interch 96.8 0.00088 3E-08 62.0 4.9 45 146-191 23-67 (193)
356 3bj5_A Protein disulfide-isome 96.8 0.0022 7.6E-08 56.6 7.1 111 126-240 13-130 (147)
357 3ctg_A Glutaredoxin-2; reduced 96.8 0.00089 3.1E-08 57.8 4.4 80 134-231 27-114 (129)
358 3mng_A Peroxiredoxin-5, mitoch 96.8 0.00077 2.6E-08 61.4 3.9 55 147-201 43-103 (173)
359 1gh2_A Thioredoxin-like protei 96.8 0.01 3.5E-07 48.5 10.5 95 242-346 5-104 (107)
360 2av4_A Thioredoxin-like protei 96.7 0.0065 2.2E-07 53.8 9.3 99 243-346 26-136 (160)
361 3h8q_A Thioredoxin reductase 3 96.7 0.001 3.5E-08 55.9 4.0 59 151-222 19-84 (114)
362 3qou_A Protein YBBN; thioredox 96.7 0.0055 1.9E-07 60.1 9.9 100 238-347 6-112 (287)
363 2dj3_A Protein disulfide-isome 96.7 0.0014 4.7E-08 56.2 4.8 100 241-347 9-116 (133)
364 1ti3_A Thioredoxin H, PTTRXH1; 96.7 0.01 3.5E-07 48.7 10.1 99 241-346 7-109 (113)
365 2vim_A Thioredoxin, TRX; thior 96.7 0.01 3.5E-07 47.9 9.9 94 244-346 4-102 (104)
366 2l6c_A Thioredoxin; oxidoreduc 96.7 0.012 4.1E-07 48.5 10.4 96 241-347 5-104 (110)
367 2dj0_A Thioredoxin-related tra 96.7 0.0024 8.3E-08 55.1 6.0 96 240-345 8-117 (137)
368 1xfl_A Thioredoxin H1; AT3G510 96.6 0.015 5.2E-07 49.2 10.5 98 241-346 19-121 (124)
369 1r26_A Thioredoxin; redox-acti 96.6 0.0095 3.3E-07 50.7 9.1 94 241-346 21-120 (125)
370 3l9v_A Putative thiol-disulfid 96.6 0.00079 2.7E-08 62.1 2.3 43 147-190 14-59 (189)
371 2vm1_A Thioredoxin, thioredoxi 96.5 0.012 4.1E-07 48.7 9.5 99 241-346 9-111 (118)
372 3ul3_B Thioredoxin, thioredoxi 96.5 0.0077 2.6E-07 51.2 8.0 83 259-347 41-128 (128)
373 2oe3_A Thioredoxin-3; electron 96.5 0.011 3.6E-07 49.3 8.7 98 237-346 10-113 (114)
374 2j23_A Thioredoxin; immune pro 96.5 0.0096 3.3E-07 50.1 8.5 93 243-346 20-118 (121)
375 3dxb_A Thioredoxin N-terminall 96.4 0.013 4.5E-07 55.2 10.0 99 240-347 13-116 (222)
376 3f3q_A Thioredoxin-1; His TAG, 96.4 0.02 6.9E-07 47.0 9.9 93 243-346 11-107 (109)
377 3d6i_A Monothiol glutaredoxin- 96.4 0.017 5.9E-07 47.4 9.5 97 242-346 3-106 (112)
378 3feu_A Putative lipoprotein; a 96.3 0.0016 5.3E-08 59.9 2.7 40 147-189 22-61 (185)
379 2pu9_C TRX-F, thioredoxin F-ty 96.3 0.029 1E-06 45.9 10.5 97 241-346 7-108 (111)
380 2xc2_A Thioredoxinn; oxidoredu 96.3 0.026 9E-07 46.8 10.2 95 241-346 15-115 (117)
381 2f51_A Thioredoxin; electron t 96.2 0.021 7.2E-07 47.8 9.2 98 245-350 11-114 (118)
382 2wz9_A Glutaredoxin-3; protein 96.2 0.027 9.3E-07 49.5 10.2 97 242-347 16-116 (153)
383 3iv4_A Putative oxidoreductase 96.2 0.012 4E-07 49.1 7.1 94 243-344 11-111 (112)
384 1v98_A Thioredoxin; oxidoreduc 96.2 0.031 1E-06 48.1 10.2 106 351-478 34-140 (140)
385 1wou_A Thioredoxin -related pr 96.2 0.031 1.1E-06 47.1 10.0 99 241-346 7-122 (123)
386 3sbc_A Peroxiredoxin TSA1; alp 96.1 0.01 3.5E-07 55.7 7.0 88 147-234 52-178 (216)
387 3d22_A TRXH4, thioredoxin H-ty 96.0 0.022 7.5E-07 48.9 8.6 102 239-347 25-130 (139)
388 1faa_A Thioredoxin F; electron 96.0 0.045 1.5E-06 45.8 10.1 98 241-346 20-121 (124)
389 3keb_A Probable thiol peroxida 96.0 0.019 6.4E-07 54.3 8.2 85 147-236 48-175 (224)
390 1hyu_A AHPF, alkyl hydroperoxi 96.0 0.2 6.8E-06 53.5 17.5 172 147-347 18-198 (521)
391 3gix_A Thioredoxin-like protei 95.9 0.047 1.6E-06 47.8 10.3 99 243-346 8-118 (149)
392 2fwh_A Thiol:disulfide interch 95.8 0.064 2.2E-06 45.8 10.3 101 243-347 16-126 (134)
393 2djj_A PDI, protein disulfide- 95.6 0.035 1.2E-06 46.2 8.0 96 241-347 9-115 (121)
394 2kuc_A Putative disulphide-iso 95.5 0.034 1.1E-06 47.0 7.5 102 243-347 10-119 (130)
395 3cxg_A Putative thioredoxin; m 95.5 0.05 1.7E-06 46.6 8.6 99 241-346 22-126 (133)
396 2l57_A Uncharacterized protein 95.5 0.11 3.7E-06 43.5 10.5 92 368-480 26-121 (126)
397 4f82_A Thioredoxin reductase; 95.2 0.011 3.9E-07 53.6 3.7 54 148-201 49-107 (176)
398 1wmj_A Thioredoxin H-type; str 95.2 0.019 6.7E-07 48.4 5.0 92 245-346 21-119 (130)
399 3tue_A Tryparedoxin peroxidase 95.2 0.039 1.3E-06 51.9 7.3 89 147-235 56-183 (219)
400 3gha_A Disulfide bond formatio 95.2 0.089 3E-06 48.7 9.8 46 143-188 25-72 (202)
401 3fk8_A Disulphide isomerase; A 95.1 0.061 2.1E-06 45.6 7.9 96 247-345 16-129 (133)
402 3qcp_A QSOX from trypanosoma b 95.1 0.013 4.5E-07 61.4 4.1 78 241-323 25-115 (470)
403 2yj7_A LPBCA thioredoxin; oxid 94.0 0.0039 1.3E-07 50.4 0.0 96 242-346 4-104 (106)
404 3evi_A Phosducin-like protein 95.0 0.087 3E-06 44.3 8.2 99 241-348 5-113 (118)
405 3emx_A Thioredoxin; structural 94.9 0.073 2.5E-06 45.6 7.9 96 241-347 18-124 (135)
406 1qgv_A Spliceosomal protein U5 94.8 0.095 3.3E-06 45.4 8.3 73 245-322 10-87 (142)
407 1zma_A Bacterocin transport ac 94.6 0.046 1.6E-06 45.4 5.7 95 241-345 14-117 (118)
408 2wci_A Glutaredoxin-4; redox-a 94.6 0.025 8.6E-07 49.0 3.9 60 149-222 36-104 (135)
409 3l4n_A Monothiol glutaredoxin- 94.5 0.013 4.5E-07 50.2 1.9 73 135-222 5-84 (127)
410 2dbc_A PDCL2, unnamed protein 94.4 0.17 5.9E-06 43.2 9.0 99 241-348 12-120 (135)
411 2trc_P Phosducin, MEKA, PP33; 94.4 0.083 2.9E-06 49.6 7.5 102 241-349 101-213 (217)
412 1aba_A Glutaredoxin; electron 94.3 0.047 1.6E-06 43.0 4.6 56 151-215 2-75 (87)
413 3l9s_A Thiol:disulfide interch 94.2 0.023 7.8E-07 52.3 3.0 42 147-189 21-65 (191)
414 4eo3_A Bacterioferritin comigr 94.2 0.14 4.7E-06 51.2 8.9 86 147-236 24-138 (322)
415 2ct6_A SH3 domain-binding glut 93.7 0.081 2.8E-06 43.9 5.3 55 150-214 9-81 (111)
416 1t1v_A SH3BGRL3, SH3 domain-bi 93.7 0.049 1.7E-06 43.5 3.7 67 151-233 4-82 (93)
417 2axo_A Hypothetical protein AT 93.4 0.11 3.9E-06 50.1 6.3 78 149-235 44-141 (270)
418 3zyw_A Glutaredoxin-3; metal b 93.1 0.063 2.1E-06 44.7 3.6 66 151-232 18-92 (111)
419 1nm3_A Protein HI0572; hybrid, 92.7 0.054 1.9E-06 51.5 3.0 68 149-232 170-240 (241)
420 1fo5_A Thioredoxin; disulfide 92.5 0.39 1.3E-05 36.6 7.3 54 283-346 30-83 (85)
421 1a0r_P Phosducin, MEKA, PP33; 92.3 0.48 1.6E-05 45.2 9.1 103 241-349 114-226 (245)
422 3ipz_A Monothiol glutaredoxin- 92.3 0.12 4E-06 42.8 4.2 53 157-222 31-87 (109)
423 3f9u_A Putative exported cytoc 91.9 0.6 2E-05 41.4 8.8 99 243-346 30-163 (172)
424 3dml_A Putative uncharacterize 91.6 0.39 1.3E-05 40.2 6.6 82 261-346 19-107 (116)
425 3gx8_A Monothiol glutaredoxin- 91.5 0.25 8.6E-06 41.6 5.5 53 157-222 29-88 (121)
426 1xiy_A Peroxiredoxin, pfaop; a 90.4 0.23 8E-06 45.1 4.5 55 147-201 43-104 (182)
427 3c7m_A Thiol:disulfide interch 90.4 0.25 8.7E-06 44.7 4.8 43 146-189 16-59 (195)
428 3erw_A Sporulation thiol-disul 90.0 1.4 4.9E-05 36.9 9.1 44 299-345 102-145 (145)
429 2wem_A Glutaredoxin-related pr 89.9 0.24 8.1E-06 41.6 3.8 53 157-222 33-90 (118)
430 2lja_A Putative thiol-disulfid 89.9 1.9 6.3E-05 36.8 9.9 92 369-480 31-147 (152)
431 1nho_A Probable thioredoxin; b 89.5 0.86 3E-05 34.5 6.6 79 372-475 5-84 (85)
432 3gl3_A Putative thiol:disulfid 88.6 2.9 0.0001 35.5 10.2 102 369-480 29-146 (152)
433 2lrn_A Thiol:disulfide interch 88.5 3.1 0.0001 35.5 10.3 89 369-480 30-145 (152)
434 2pzi_A Probable serine/threoni 88.5 0.41 1.4E-05 52.9 5.4 53 11-70 621-675 (681)
435 2f9s_A Thiol-disulfide oxidore 87.8 2.5 8.7E-05 35.9 9.2 93 369-480 27-142 (151)
436 2b5x_A YKUV protein, TRXY; thi 87.5 2.9 9.8E-05 35.1 9.3 89 369-478 30-147 (148)
437 1zzo_A RV1677; thioredoxin fol 87.5 3.2 0.00011 34.2 9.5 82 260-346 25-132 (136)
438 2xhf_A Peroxiredoxin 5; oxidor 87.1 0.47 1.6E-05 42.6 4.0 55 147-201 42-101 (171)
439 2lst_A Thioredoxin; structural 86.4 0.14 4.7E-06 43.1 0.0 62 284-346 51-113 (130)
440 2ju5_A Thioredoxin disulfide i 85.5 2.8 9.6E-05 36.3 8.3 83 259-345 46-148 (154)
441 3raz_A Thioredoxin-related pro 85.5 4.5 0.00016 34.4 9.6 100 369-480 25-144 (151)
442 3or5_A Thiol:disulfide interch 85.3 5.1 0.00017 34.4 9.9 101 369-480 35-155 (165)
443 2dlx_A UBX domain-containing p 85.1 3.8 0.00013 35.8 8.8 96 245-344 27-131 (153)
444 2fgx_A Putative thioredoxin; N 85.0 1.9 6.7E-05 35.2 6.4 74 262-344 30-106 (107)
445 3kcm_A Thioredoxin family prot 84.9 5.5 0.00019 33.8 9.9 94 369-480 29-147 (154)
446 2l5o_A Putative thioredoxin; s 84.7 5.6 0.00019 33.7 9.8 92 369-480 29-145 (153)
447 1lu4_A Soluble secreted antige 84.0 4.7 0.00016 33.2 8.8 85 369-475 25-135 (136)
448 3f4s_A Alpha-DSBA1, putative u 83.4 1.1 3.7E-05 42.1 4.8 51 140-190 32-84 (226)
449 1wjk_A C330018D20RIK protein; 81.9 14 0.00049 29.1 10.5 79 260-347 15-94 (100)
450 2in3_A Hypothetical protein; D 81.5 1.7 6E-05 39.8 5.4 46 190-236 164-209 (216)
451 4evm_A Thioredoxin family prot 81.1 11 0.00037 30.6 10.0 45 299-346 92-136 (138)
452 3fkf_A Thiol-disulfide oxidore 81.0 9.3 0.00032 31.8 9.7 43 369-413 34-78 (148)
453 3ia1_A THIO-disulfide isomeras 80.7 5.2 0.00018 34.0 8.0 96 370-480 32-148 (154)
454 3hdc_A Thioredoxin family prot 80.2 11 0.00037 32.2 10.0 60 286-348 73-151 (158)
455 3gn3_A Putative protein-disulf 80.1 1.4 4.7E-05 39.8 4.0 43 146-188 13-55 (182)
456 1u6t_A SH3 domain-binding glut 80.0 1.6 5.6E-05 36.6 4.1 66 150-222 1-78 (121)
457 1jfu_A Thiol:disulfide interch 79.8 9.9 0.00034 33.5 9.8 102 369-480 61-184 (186)
458 3hcz_A Possible thiol-disulfid 79.2 7.9 0.00027 32.3 8.6 45 369-415 32-77 (148)
459 3ira_A Conserved protein; meth 78.9 6.1 0.00021 35.2 7.9 87 231-324 13-116 (173)
460 2wul_A Glutaredoxin related pr 78.7 1 3.4E-05 37.7 2.4 53 157-222 33-90 (118)
461 1ttz_A Conserved hypothetical 78.0 14 0.00047 28.6 8.9 72 264-347 3-75 (87)
462 2kok_A Arsenate reductase; bru 77.8 3.7 0.00013 34.2 5.7 44 151-201 7-57 (120)
463 3gmf_A Protein-disulfide isome 77.7 2.6 9E-05 38.8 5.3 46 144-189 12-59 (205)
464 3tdg_A DSBG, putative uncharac 77.7 0.97 3.3E-05 43.6 2.3 29 146-174 146-174 (273)
465 3ph9_A Anterior gradient prote 76.9 4.8 0.00017 35.0 6.5 75 247-324 31-112 (151)
466 3bci_A Disulfide bond protein 76.8 2.4 8.2E-05 37.9 4.6 44 145-188 9-54 (186)
467 3ha9_A Uncharacterized thiored 76.6 14 0.00046 31.8 9.5 39 369-411 38-77 (165)
468 1sen_A Thioredoxin-like protei 75.6 5.7 0.0002 34.7 6.7 60 259-321 45-112 (164)
469 3eyt_A Uncharacterized protein 74.7 19 0.00065 30.4 9.9 40 369-410 29-70 (158)
470 3kp8_A Vkorc1/thioredoxin doma 74.5 4.3 0.00015 32.8 5.2 47 292-347 43-93 (106)
471 3u5r_E Uncharacterized protein 74.3 17 0.00059 33.2 10.0 99 371-480 62-191 (218)
472 3lor_A Thiol-disulfide isomera 73.8 19 0.00065 30.4 9.7 40 369-410 31-72 (160)
473 3fw2_A Thiol-disulfide oxidore 73.2 17 0.00059 30.5 9.2 44 369-414 34-81 (150)
474 2ywi_A Hypothetical conserved 73.2 13 0.00043 33.0 8.6 99 371-480 49-178 (196)
475 1t4y_A Adaptive-response senso 72.2 34 0.0012 27.5 9.6 84 150-235 13-97 (105)
476 2x8g_A Thioredoxin glutathione 72.0 1.9 6.4E-05 46.6 3.1 55 151-215 20-81 (598)
477 2jad_A Yellow fluorescent prot 71.9 1.9 6.5E-05 43.3 2.8 60 151-222 263-332 (362)
478 3kzq_A Putative uncharacterize 70.3 3.7 0.00012 37.5 4.2 45 191-236 158-202 (208)
479 1kng_A Thiol:disulfide interch 67.8 17 0.00059 30.5 7.9 44 299-345 105-148 (156)
480 1ilo_A Conserved hypothetical 67.6 15 0.00053 26.6 6.7 49 283-344 27-76 (77)
481 3s9f_A Tryparedoxin; thioredox 67.4 13 0.00044 32.3 7.1 21 301-322 118-138 (165)
482 3lwa_A Secreted thiol-disulfid 67.3 13 0.00043 32.7 7.1 96 369-476 60-181 (183)
483 1o73_A Tryparedoxin; electron 67.0 11 0.00036 31.5 6.3 37 286-323 61-120 (144)
484 1o8x_A Tryparedoxin, TRYX, TXN 66.1 11 0.00039 31.6 6.3 63 260-323 28-120 (146)
485 2h30_A Thioredoxin, peptide me 64.7 20 0.00069 30.4 7.8 91 369-479 39-159 (164)
486 2cvb_A Probable thiol-disulfid 63.3 45 0.0015 29.1 10.1 99 369-480 34-163 (188)
487 1i5g_A Tryparedoxin II; electr 63.2 11 0.00039 31.4 5.7 63 260-323 28-120 (144)
488 1z6n_A Hypothetical protein PA 62.5 16 0.00054 32.2 6.7 63 259-324 53-122 (167)
489 2b1k_A Thiol:disulfide interch 62.4 19 0.00063 31.0 7.2 44 299-345 113-156 (168)
490 3bci_A Disulfide bond protein 61.4 7.1 0.00024 34.7 4.3 40 191-236 138-177 (186)
491 1z3e_A Regulatory protein SPX; 60.9 3.7 0.00013 34.8 2.1 52 151-210 3-58 (132)
492 2lrt_A Uncharacterized protein 60.5 26 0.00088 29.6 7.6 49 369-419 36-85 (152)
493 3ewl_A Uncharacterized conserv 60.3 41 0.0014 27.6 8.8 37 305-347 103-139 (142)
494 1rw1_A Conserved hypothetical 56.2 5.2 0.00018 32.8 2.2 34 151-191 2-35 (114)
495 4f03_A Glutathione transferase 55.6 31 0.001 31.7 7.8 73 156-239 19-102 (253)
496 3feu_A Putative lipoprotein; a 55.0 8.4 0.00029 34.5 3.5 42 191-235 141-182 (185)
497 2bmx_A Alkyl hydroperoxidase C 51.7 1E+02 0.0035 27.0 10.5 104 369-480 46-174 (195)
498 3c7m_A Thiol:disulfide interch 50.8 6.2 0.00021 35.2 1.9 43 191-236 151-193 (195)
499 3dwv_A Glutathione peroxidase- 50.1 79 0.0027 27.6 9.4 41 369-411 47-88 (187)
500 2hyx_A Protein DIPZ; thioredox 49.7 62 0.0021 32.1 9.3 98 369-478 83-201 (352)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-47 Score=437.39 Aligned_cols=413 Identities=19% Similarity=0.251 Sum_probs=265.4
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCCCCCCCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQD 93 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~-~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~~ 93 (554)
.....|||++|||+++|+.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||++|..+.....
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~- 95 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ- 95 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC-
Confidence 345689999999999999999999999999999999995 577899999999999999999999999999987632221
Q ss_pred CccccccCCCCCCCCccccCCCCCCccccccccccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHH
Q psy16770 94 SASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLM 173 (554)
Q Consensus 94 ~~~~~~~~~~~~~f~~~f~~~~~f~f~~~~~~~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a 173 (554)
+.++ ..|+.|...|+. ++ ....+++||.++|++.| .++++++|+||||||++|+++.|.|++++
T Consensus 96 --~~~~--~~~~~~~~~fg~--------~~-~~~~v~~l~~~~f~~~i---~~~~~~lv~Fya~wC~~C~~~~p~~~~~a 159 (780)
T 3apo_A 96 --GGQY--ESWSYYRYDFGI--------YD-DDPEIITLERREFDAAV---NSGELWFVNFYSPGSSHSHDLAPTWREFA 159 (780)
T ss_dssp ------------CCSSSSST--------TT-TCTTEEECCHHHHHHHH---TSSSCEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred --CCCc--ccccccchhhcc--------cC-CCcceeeechHhHHhhh---cCCCcEEEEEeCCCCcchhHhhHHHHHHH
Confidence 1111 122222222221 11 12358899999999999 56889999999999999999999999999
Q ss_pred HHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcc----cH
Q psy16770 174 DELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSAT----NV 249 (554)
Q Consensus 174 ~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~----~~ 249 (554)
+.+++. +.+++|||++++.+|++++|++ +||+++|++|+....+.|.++.+.|++|+.+++++. +..++.. ++
T Consensus 160 ~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~-~~~i~~~~~~~~l 236 (780)
T 3apo_A 160 KEVDGL-LRIGAVNCGDDRMLCRMKGVNS-YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRST-VTELSTGNFVNAI 236 (780)
T ss_dssp HHTTTT-SEEEEEETTTCSSCC---------CEEEEECTTSCCEECCSCSCHHHHHHHHHTTSCCC-EEECCHHHHHHHH
T ss_pred HHhcCc-eEEEEEeCCCcHHHHHHcCCce-eeeEEEEeCCcEeeEecCCCCHHHHHHHHHHhchhh-heeccchhhHHHH
Confidence 999874 9999999999999999999998 999999999986544556679999999999999988 4555554 45
Q ss_pred HHHHhhhhcCCceEEEEEecCCc---hhHHHHHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCC--
Q psy16770 250 DAFLDNWREDNKVHALLFQRSLP---VRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKD-- 324 (554)
Q Consensus 250 ~~fl~~~~~~~~~~v~~f~~~~~---~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~-- 324 (554)
++++ +.+.+.|++|.+... ........+..+++.+.||+++|+ .+..+++++++++ .| +++|++...
T Consensus 237 ~~~~----~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~f~~v~c~--~~~~l~~~~gi~~-~p-~~~f~~~~~~~ 308 (780)
T 3apo_A 237 ETAF----AAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCD--AQDSLCKSLDTTA-ST-TAYFPPGATLN 308 (780)
T ss_dssp HHHH----HHTCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEEEEEEETT--TSHHHHTCC------C-EEEECTTCCSS
T ss_pred Hhhh----ccCCCEEEEEecCcccccCHHHHHHHHHHhhccceEEEEEcC--CCHHHHHHhCCCC-Cc-eeeeccccccC
Confidence 5555 347778888876543 222333344467899999999998 5679999999996 56 777766321
Q ss_pred --CCCceeecCCCChhHHHhHHhcCCCcccccccchhhhhhcCCCCceEEEEEcCCCCcchhHHHHHHHHHhhccCCCCc
Q psy16770 325 --RPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNN 402 (554)
Q Consensus 325 --~~~~~i~~~~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~c~~~~lcvvl~~~~~~~~~~~~~~l~~~a~~~~~~~~~ 402 (554)
.....++.+.++...|..|+.. ..|.+.++|..++.. .+...++ +|+|.... +.+...+.++++|.. ++++.
T Consensus 309 ~~~~~~~~y~g~~~~~~i~~~i~~-~~p~v~~it~~~f~~-~~~~~~~-lv~F~~~~-~~~~~~~~~~~~A~~--~~~~~ 382 (780)
T 3apo_A 309 DREKSSVLFLNSLDAKEIYMEIIH-NLPDFELLSANQLED-RLAHHRW-LVFFHFGK-NENANDPELKKLKTL--LKNEH 382 (780)
T ss_dssp TTTGGGSEEECCCCHHHHHHHHHH-HSCCCCEECHHHHHH-HHTTSEE-EEEEECC------CCGGGGGHHHH--HGGGT
T ss_pred CCcccceeccccccHHHHHHHHHH-hCCCcccCCHHHHHH-HhccCCe-EEEEecCC-ccccchHHHHHHHHh--hccCc
Confidence 1123567889999999999995 889999998665543 3323344 44454332 223345688888888 77667
Q ss_pred eEEEEEecccchHHHHhhCCCCCCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCC
Q psy16770 403 IAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 479 (554)
Q Consensus 403 v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~ 479 (554)
+.|+|+|+..++.++..+ +.. .|.+ ++. +... ..+..++| +.+.+.|.+|+..-..+..
T Consensus 383 i~f~~~D~~~~~~~~~~~----~~~--~p~i-~l~--~~~~~e~~~~~~g---------~~~~~~i~~f~~~~~~~~v 442 (780)
T 3apo_A 383 IQVVRFDCSSAPGICSDL----YVF--QPSL-AVF--KGQGTKEYEIHHG---------KKILYDILAFAKESVNSHV 442 (780)
T ss_dssp EEEEEEEGGGCHHHHHHT----TCC--SCEE-EEE--ESSTTSSEEECCS---------CCCHHHHHHHHHHHHTSCE
T ss_pred eeEEEEeCCCchhhHhhc----ccc--CChh-hhc--cCCCcceeeeccc---------HhhHHHHHHHhhhccCCCC
Confidence 999999999889999887 111 1222 223 2223 33555565 3688999999988665544
No 2
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=4.2e-39 Score=335.09 Aligned_cols=324 Identities=15% Similarity=0.195 Sum_probs=247.0
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEccccccccc---ch---HHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQ---VE---PIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGV 200 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~---l~---p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v 200 (554)
+.+++||.+||++.| +++++++|+||||||+||+. ++ |.|+++++.+++.++.+++|||+.++.+|++|||
T Consensus 13 ~~v~~lt~~~f~~~i---~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V 89 (367)
T 3us3_A 13 DRVINVNAKNYKNVF---KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGL 89 (367)
T ss_dssp CCCEECCTTTHHHHH---HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTC
T ss_pred CccEECCHHHHHHHH---hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCC
Confidence 468999999999988 46789999999999999733 23 7999999999876799999999999999999999
Q ss_pred cCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-
Q psy16770 201 GSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI- 279 (554)
Q Consensus 201 ~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~- 279 (554)
++ +||+++|++|+++.|.|+ ++++.|++|+.+++++++..+.+.+++++|+.. +...++|++|.+...+....+.
T Consensus 90 ~~-~PTl~~f~~G~~~~y~G~-~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~--~~~~~vv~ff~~~~~~~~~~f~~ 165 (367)
T 3us3_A 90 TE-EDSIYVFKEDEVIEYDGE-FSADTLVEFLLDVLEDPVELIEGERELQAFENI--EDEIKLIGYFKNKDSEHYKAFKE 165 (367)
T ss_dssp CS-TTEEEEEETTEEEECCSC-CSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHC--CSSCEEEEECSCTTCHHHHHHHH
T ss_pred Cc-CceEEEEECCcEEEeCCC-CCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhcc--CCCcEEEEEECCCCchHHHHHHH
Confidence 98 999999999998877765 589999999999999884444456889999852 1344555566554555444444
Q ss_pred HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecC-CCChhHHHhHHhcCCCcccccccch
Q psy16770 280 NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMN-SIPVPTLQDITDNNPYLTLPRISSQ 358 (554)
Q Consensus 280 ~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~-~~~~~~l~~fi~~~~~~~v~~lt~~ 358 (554)
.|..+++++.||.+ .+.+++++|+++ .|+|++|++..+.+ ..+.+ .++.+.|.+||+.+.+|+++++|.+
T Consensus 166 ~A~~~~~~~~F~~~-----~~~~~~~~~~v~--~p~i~lf~~~~~~~--~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~ 236 (367)
T 3us3_A 166 AAEEFHPYIPFFAT-----FDSKVAKKLTLK--LNEIDFYEAFMEEP--VTIPDKPNSEEEIVNFVEEHRRSTLRKLKPE 236 (367)
T ss_dssp HHHHHTTTSCEEEE-----CCHHHHHHHTCC--TTCEEEECTTCSSC--EECSSSSCCHHHHHHHHHHTCSCSEEECCGG
T ss_pred HHHhhcCCcEEEEE-----CCHHHHHHcCCC--CCeEEEEcCCCCCC--eecCCCCCCHHHHHHHHHHcCccceeecChh
Confidence 34477889999999 678999999998 59999999865554 45666 4889999999999999999999998
Q ss_pred hhhhhcCC-CCceEEEEEcCC-CCcchhHHHHHHHHHhhccCCCC-ceEEEEEecccchHHHH----hhCCCCCCccccc
Q psy16770 359 SMLDAVCP-VKKLCVVLFSED-SPEHDASRHTLRRFAQESRFVHN-NIAFMYVFIEKQPEFVN----ALTSPEDSSEISL 431 (554)
Q Consensus 359 ~~~~~~c~-~~~lcvvl~~~~-~~~~~~~~~~l~~~a~~~~~~~~-~v~F~~vd~~~q~~~~~----~~~~~~~~~~~~~ 431 (554)
+.....+. ..+.++++|... ..+..+..+.|+++|++ ++++ ++.|+|+|++.++..++ .| |.. .
T Consensus 237 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~--~~~~~ki~F~~id~~~~~~~l~~~~~~f----gl~---~ 307 (367)
T 3us3_A 237 SMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQD--NTDNPDLSIIWIDPDDFPLLVPYWEKTF----DID---L 307 (367)
T ss_dssp GHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHH--TTTCTTCCEEEECGGGCTTTHHHHHHHH----TCC---T
T ss_pred hHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHH--cCCCCceEEEEECCccchhHHHHHHHhc----CCC---C
Confidence 87655432 133455556653 33457788899999999 9874 69999999998776543 35 211 1
Q ss_pred eEEEEEEecCCC---eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCCCc
Q psy16770 432 HIAAMWRMDYKK---IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNL 482 (554)
Q Consensus 432 ~~~~v~~~~~~~---~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~~~ 482 (554)
++|.+.+.+..+ .+| .+++. ...+|.++|.+|+++++.|+.+|-
T Consensus 308 ~~P~~~i~~~~~~~~~~y-~~~~~------~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 308 SAPQIGVVNVTDADSVWM-EMDDE------EDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp TSCEEEEEETTTCCEEEC-CCCTT------SCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred CCCeEEEEecccccceee-cCCcc------cccCCHHHHHHHHHHHHcCCcCcc
Confidence 344444444443 244 33320 015799999999999999999743
No 3
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=1.9e-37 Score=320.82 Aligned_cols=319 Identities=16% Similarity=0.192 Sum_probs=249.0
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHH-------HHHHHHHhCCCCEEEEEEEecCcHHHHHHhC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPI-------FKKLMDELSPLGVGFFTVHVHNEQGLARRLG 199 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~-------~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~ 199 (554)
..+++||.++|++.+ ..+++++|+||||||+ |+++.|. |+++++.+++.++.+++|||+.++++|++|+
T Consensus 11 ~~v~~l~~~~f~~~i---~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~ 86 (350)
T 1sji_A 11 DRVVSLTEKNFKQVL---KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLG 86 (350)
T ss_dssp CCCEEECHHHHHHHH---TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHT
T ss_pred CccEECCHHHHHHHH---hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcC
Confidence 358899999999988 4578999999999999 9999999 9999999986579999999999999999999
Q ss_pred CcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHh-hhhcCCceEEEEEecCCchhHHHH
Q psy16770 200 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLD-NWREDNKVHALLFQRSLPVRLRYL 278 (554)
Q Consensus 200 v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~-~~~~~~~~~v~~f~~~~~~~~~~~ 278 (554)
|++ +||+++|++|++..|.|+ ++.+.|++|+.+.+++++..+.+.+++++|+. . ...++|++|.+..++....+
T Consensus 87 v~~-~Pt~~~~~~g~~~~~~G~-~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~---~~~~vv~ff~~~~~~~~~~~ 161 (350)
T 1sji_A 87 FDE-EGSLYVLKGDRTIEFDGE-FAADVLVEFLLDLIEDPVEIINSKLEVQAFERIE---DQIKLIGFFKSEESEYYKAF 161 (350)
T ss_dssp CCS-TTEEEEEETTEEEEECSC-CCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCC---SSCEEEEECSCTTSHHHHHH
T ss_pred CCc-cceEEEEECCcEEEecCC-CCHHHHHHHHHHhcCCcceeccchHHHHHHhccC---CCcEEEEEECCCCcHHHHHH
Confidence 998 999999999997777765 68999999999999988443335688999985 3 34455556655455444444
Q ss_pred HHhh-ccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCC-CChhHHHhHHhcCCCccccccc
Q psy16770 279 INAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNS-IPVPTLQDITDNNPYLTLPRIS 356 (554)
Q Consensus 279 ~~a~-~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~-~~~~~l~~fi~~~~~~~v~~lt 356 (554)
..++ .+++++.||.+ .+++++++++++ .|+|++|++..+.+ ..+.++ ++...|.+||+.+..|+++++|
T Consensus 162 ~~~A~~~~~~~~f~~~-----~~~~~~~~~~v~--~p~i~~~~~~~~~~--~~y~g~~~~~~~l~~fi~~~~~p~v~elt 232 (350)
T 1sji_A 162 EEAAEHFQPYIKFFAT-----FDKGVAKKLSLK--MNEVDFYEPFMDEP--IAIPDKPYTEEELVEFVKEHQRPTLRRLR 232 (350)
T ss_dssp HHHHHHTTTTSEEEEE-----CCHHHHHHHTCC--TTCEEEECTTCSSC--EECSSSSCCHHHHHHHHHHHCCCSEEECC
T ss_pred HHHHHhhccCcEEEEE-----CCHHHHHHcCCC--CCcEEEEeCCCCCc--eecCCCCCCHHHHHHHHHHcCccchhhcC
Confidence 4333 67899999999 678899999998 79999999865555 456676 8899999999999999999999
Q ss_pred chhhhhhcCCC--CceEEEEEcCCC-CcchhHHHHHHHHHhhccCCC-CceEEEEEecccchHHH----HhhCCCCCCcc
Q psy16770 357 SQSMLDAVCPV--KKLCVVLFSEDS-PEHDASRHTLRRFAQESRFVH-NNIAFMYVFIEKQPEFV----NALTSPEDSSE 428 (554)
Q Consensus 357 ~~~~~~~~c~~--~~lcvvl~~~~~-~~~~~~~~~l~~~a~~~~~~~-~~v~F~~vd~~~q~~~~----~~~~~~~~~~~ 428 (554)
.++..+ .|.. +++|+++|.... .++.+.++.|+++|++ +++ +++.|+|+|++.++.++ +.| |..
T Consensus 233 ~~~~~~-~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~--~~~~~~~~f~~id~~~~~~~~~~~~~~~----gi~- 304 (350)
T 1sji_A 233 PEDMFE-TWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARD--NTDNPDLSIVWIDPDDFPLLVAYWEKTF----KID- 304 (350)
T ss_dssp TTTHHH-HHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHH--GGGCSSCCEEEECGGGCHHHHHHHHHHC----CSC-
T ss_pred hhhHHH-HhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHH--hCCCCceEEEEECchhhHHHHHHHHhhc----CCC-
Confidence 888754 3422 267888776532 2346788899999999 873 56999999999888877 556 211
Q ss_pred ccceEEEEEEecC-CCeeEEE-ecCCCCCcccccchhhHHHHHHHHhhhcCCC
Q psy16770 429 ISLHIAAMWRMDY-KKIKYGW-LLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 479 (554)
Q Consensus 429 ~~~~~~~v~~~~~-~~~ky~~-~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~ 479 (554)
.++|++...+. ++.+|.. +++. ..+.|.++|.+|+++++.|+.
T Consensus 305 --~~~P~~~i~~~~~~~~~~~~~~~~------~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 305 --LFKPQIGVVNVTDADSVWMEIPDD------DDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp --TTSCEEEEEESSSSCEEESCSSCC------SCCCCHHHHHHHHHHHHTSCC
T ss_pred --ccCCcEEEEecccccccccCCCcc------cccCCHHHHHHHHHHHhcCcc
Confidence 13455544454 3357853 3320 125789999999999999985
No 4
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=100.00 E-value=2e-38 Score=304.18 Aligned_cols=202 Identities=26% Similarity=0.451 Sum_probs=168.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCCCCCCCCCccc
Q psy16770 19 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASR 97 (554)
Q Consensus 19 ~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~-~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~~~~~~ 97 (554)
.|||++|||+++|+.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..+......
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~~---- 77 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQG---- 77 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTCS----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccccc----
Confidence 58999999999999999999999999999999996 6789999999999999999999999999999875322211
Q ss_pred cccCCCCCCCCccccCCCCCCccccccccccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhC
Q psy16770 98 NFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS 177 (554)
Q Consensus 98 ~~~~~~~~~f~~~f~~~~~f~f~~~~~~~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~ 177 (554)
..+..| ..|.+. |++ ++ ....+..|+.++|+..+ ..+++++|.||++||++|+.+.|.|+++++.++
T Consensus 78 ----~~~~~~-~~~~~~--fg~--~~-~~~~v~~l~~~~f~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~ 144 (210)
T 3apq_A 78 ----GQYESW-SYYRYD--FGI--YD-DDPEIITLERREFDAAV---NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVD 144 (210)
T ss_dssp ----CCCCCH-HHHHHS--SST--TT-TCTTSEECCHHHHHHHH---HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTB
T ss_pred ----cccccc-cccccc--ccc--cC-CCCceEEecHHHHHHHH---ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhc
Confidence 111111 112221 111 11 12357789999999988 467899999999999999999999999999997
Q ss_pred CCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 178 PLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 178 ~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+ .+.++.|||+.++.+|++++|.+ +||+++|++|+.+....|.++.+.|.+|+.+.+++.
T Consensus 145 ~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 145 G-LLRIGAVNCGDDRMLCRMKGVNS-YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp T-TBEEEEEETTTCHHHHHHTTCCS-SSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred C-ceEEEEEECCccHHHHHHcCCCc-CCeEEEEECCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 6 49999999999999999999997 999999999997766667778999999999998877
No 5
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.2e-37 Score=319.28 Aligned_cols=333 Identities=12% Similarity=0.126 Sum_probs=227.0
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCC-----CCEEEEEEEecCcHHHHHHhCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-----LGVGFFTVHVHNEQGLARRLGVG 201 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~-----~~v~~~~Vd~~~~~~l~~~~~v~ 201 (554)
..+++||.++|+..+ ..+++++|+||||||+||+++.|.|+++++.++. .++.+++|||+.++.+|++|+|+
T Consensus 5 ~~v~~l~~~~f~~~~---~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 81 (382)
T 2r2j_A 5 SEITSLDTENIDEIL---NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRIS 81 (382)
T ss_dssp ---CBCCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCC
T ss_pred CceEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCC
Confidence 358899999999977 3578999999999999999999999999999952 24999999999999999999999
Q ss_pred CCCCcceeccCCeEEE-EeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH
Q psy16770 202 SQLPQIALLTDGRTSF-FKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN 280 (554)
Q Consensus 202 ~~~Pti~~~~~g~~~~-y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~ 280 (554)
+ +||+++|++|+.+. .+.|.++.+.|++|+.+.+++++..+.+.++++. +. ....+++++|.+...+....+..
T Consensus 82 ~-~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~---~~~~~~v~ff~~~~~~~~~~f~~ 156 (382)
T 2r2j_A 82 K-YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LD---RSKRNIIGYFEQKDSDNYRVFER 156 (382)
T ss_dssp E-ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC----------------CCEEEEEESCSSSHHHHHHHH
T ss_pred c-CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hc---CCCCEEEEEECCCCChhHHHHHH
Confidence 8 99999999998764 2345568999999999999888433334566777 43 24555666776655555444443
Q ss_pred -hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCC-ChhHHHhHHhcCCCcccccccch
Q psy16770 281 -AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSI-PVPTLQDITDNNPYLTLPRISSQ 358 (554)
Q Consensus 281 -a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~-~~~~l~~fi~~~~~~~v~~lt~~ 358 (554)
|..+++++.|+.+. + ++++++++++ .| ++|++.........+.+++ +...|.+||+.+.+|+++++|.+
T Consensus 157 ~A~~~~~~~~F~~~~-----~-~~~~~~~v~~-~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~ 227 (382)
T 2r2j_A 157 VANILHDDCAFLSAF-----G-DVSKPERYSG-DN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFE 227 (382)
T ss_dssp HHHHHTTTCEEEEEE-----S-CC---------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHH
T ss_pred HHHHhhccceEEEEe-----h-hhHHhhCCCC-Cc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChh
Confidence 34778999999994 3 4778899986 67 5565543323346778888 88899999999999999999999
Q ss_pred hhhhhcCCCCceEEEEEcCCCC-cchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCCCccccceEEEEE
Q psy16770 359 SMLDAVCPVKKLCVVLFSEDSP-EHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMW 437 (554)
Q Consensus 359 ~~~~~~c~~~~lcvvl~~~~~~-~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v~ 437 (554)
+..+..|...++|++++..+.. ..+..++.+.++|.+ ++ +.+.|+|+|++.++.+++.|-.. . .++|++.
T Consensus 228 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~--~~-~~i~f~~id~~~~~~~~~~~gl~----~--~~~P~i~ 298 (382)
T 2r2j_A 228 NGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLIS--EK-GTINFLHADCDKFRHPLLHIQKT----P--ADCPVIA 298 (382)
T ss_dssp HHHHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGG--GT-TTSEEEEEETTTTHHHHHHTTCC----G--GGCSEEE
T ss_pred hHHHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHH--hC-CeeEEEEEchHHhHHHHHHcCCC----c--cCCCEEE
Confidence 9888777656777777655421 123344555666666 65 46999999999999888887211 1 2456555
Q ss_pred EecCCCeeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCCCccccccccchhh
Q psy16770 438 RMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISD 493 (554)
Q Consensus 438 ~~~~~~~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~~~~~~~~lp~~~d 493 (554)
+.+..+ .|.. ... ....+.+.|.+||++++.|+.+|..+++++|+-++
T Consensus 299 i~~~~~-~y~~-~~~------~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~~ 346 (382)
T 2r2j_A 299 IDSFRH-MYVF-GDF------KDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTA 346 (382)
T ss_dssp EECSSC-EEEC-CCS------GGGGSTTHHHHHHHHHHHTTTSSCC----------
T ss_pred EEcchh-cCCC-Ccc------ccccCHHHHHHHHHHHHCCCccccccCCCCCCCCC
Confidence 555433 3532 210 01356799999999999999999999999999764
No 6
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=1.8e-36 Score=326.76 Aligned_cols=351 Identities=14% Similarity=0.218 Sum_probs=270.9
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+++||.++|++.|...+.+++++|+||||||++|+++.|.|+++++.+++. +.+++|||+.++.+|++|||++ +||+
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Ptl 79 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTNTCNKYGVSG-YPTL 79 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHHHHHHTTCCE-ESEE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHhcCCCC-CCEE
Confidence 4788999999999964444589999999999999999999999999999875 9999999999999999999998 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhh-ccCC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHRT 286 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~-~~~~ 286 (554)
++|++|+....+.|.++.+.|++|+.+++++++..+.+.+++++|+.. ....++++|.+..+.....+..++ .+++
T Consensus 80 ~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~vv~~~~~~~~~~~~~f~~~a~~~~~ 156 (481)
T 3f8u_A 80 KIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISD---KDASIVGFFDDSFSEAHSEFLKAASNLRD 156 (481)
T ss_dssp EEEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTS---SSCEEEEEESCTTCHHHHHHHHHHHHHTT
T ss_pred EEEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhc---CCcEEEEEECCCccchHHHHHHHHHHhcc
Confidence 999999765555566799999999999999985555577889998853 344444466555555544444444 7789
Q ss_pred ceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCC----CCCCCceeec-CCCChhHHHhHHhcCCCcccccccchhhh
Q psy16770 287 TIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKED----KDRPSASITM-NSIPVPTLQDITDNNPYLTLPRISSQSML 361 (554)
Q Consensus 287 ~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~----~~~~~~~i~~-~~~~~~~l~~fi~~~~~~~v~~lt~~~~~ 361 (554)
++.||.+ .+.+++++|+++. +.+++|++. ........+. +.++...|.+||+.+++|+++++|.++..
T Consensus 157 ~~~F~~~-----~~~~~~~~~~v~~--~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~ 229 (481)
T 3f8u_A 157 NYRFAHT-----NVESLVNEYDDNG--EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKD 229 (481)
T ss_dssp TSCEEEE-----CCHHHHHHHCSSS--EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHH
T ss_pred CceEEEE-----CCHHHHHHhCCCC--CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHH
Confidence 9999999 6889999999984 569999831 1111224455 78899999999999999999999988865
Q ss_pred hhcCCCCceEEEEEcCCCCcchh----HHHHHHHHHhhccCCCC--ceEEEEEecccchHHHHhhCCCCCCccccceEEE
Q psy16770 362 DAVCPVKKLCVVLFSEDSPEHDA----SRHTLRRFAQESRFVHN--NIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAA 435 (554)
Q Consensus 362 ~~~c~~~~lcvvl~~~~~~~~~~----~~~~l~~~a~~~~~~~~--~v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~ 435 (554)
... ..+++++++..+.....+ .++.++++|++ ++++ .+.|+|+|++.....++.|-.. ......|.
T Consensus 230 ~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~--~~~k~~~i~F~~~D~~~~~~~l~~~gl~----~~~~~~P~ 301 (481)
T 3f8u_A 230 LIQ--GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKK--FLDAGHKLNFAVASRKTFSHELSDFGLE----STAGEIPV 301 (481)
T ss_dssp HHT--TSSEEEEEECCCTTTCHHHHHHHHHHHHHHHHH--HHHTTCCCEEEEEETTTTHHHHGGGTCC----CCTTCSCE
T ss_pred Hhc--CCCceEEEEecccccchhhHHHHHHHHHHHHHH--hcCCCceEEEEEEcHHHHHHHHHHcCCC----cccCCCcE
Confidence 543 346666665543323222 57789999999 8654 3999999998888888777111 00124566
Q ss_pred EEEecCCCeeEEEecCCCCCcccccchhhH--HHHHHHHhhhcCCCCCccccccccchhhhhhhHHHHHHHHHHH
Q psy16770 436 MWRMDYKKIKYGWLLGDAVDDWKDYNTTKD--RLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIF 508 (554)
Q Consensus 436 v~~~~~~~~ky~~~~~~~~~~~~~~~~t~e--~l~~fl~~~~~g~~~~~~~~~~lp~~~de~~~~~~~r~~~~~~ 508 (554)
+...+.++.+|. +++ ++|.+ .|.+|+++++.|+..+..+++++|+.+++.+..+.+..|.+++
T Consensus 302 ~~i~~~~~~ky~-~~~---------~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~ 366 (481)
T 3f8u_A 302 VAIRTAKGEKFV-MQE---------EFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIV 366 (481)
T ss_dssp EEEECSSSCEEE-CCS---------CCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHH
T ss_pred EEEEcCCCcccC-CCc---------ccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHh
Confidence 656666667884 443 35667 9999999999999999889999998877777777777777643
No 7
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=2.5e-34 Score=311.74 Aligned_cols=343 Identities=12% Similarity=0.145 Sum_probs=253.5
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..+++||.++|++.+ +.+++++|+||||||+||+++.|.|+++++.+++.++.+++|||+.++.+|++|||++ +||
T Consensus 14 ~~v~~l~~~~f~~~~---~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~Pt 89 (504)
T 2b5e_A 14 SAVVKLATDSFNEYI---QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPG-FPS 89 (504)
T ss_dssp SSCEECCTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred CCcEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCc-CCE
Confidence 358899999999988 4678999999999999999999999999999987569999999999999999999998 999
Q ss_pred ceeccCCe---EEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCC--ceEEEEEecCCchhHH-HHHH
Q psy16770 207 IALLTDGR---TSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDN--KVHALLFQRSLPVRLR-YLIN 280 (554)
Q Consensus 207 i~~~~~g~---~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~--~~~v~~f~~~~~~~~~-~~~~ 280 (554)
+++|++|+ ...|. |.++.+.|++|+.+.++++ +..+++ +++|+.. .. .+++++|.+..+.... +...
T Consensus 90 ~~~~~~g~~~~~~~~~-G~~~~~~l~~~l~~~~~~~-v~~i~~--~~~~~~~---~~~~~~~v~~f~~~~~~~~~~f~~~ 162 (504)
T 2b5e_A 90 LKIFKNSDVNNSIDYE-GPRTAEAIVQFMIKQSQPA-VAVVAD--LPAYLAN---ETFVTPVIVQSGKIDADFNATFYSM 162 (504)
T ss_dssp EEEEETTCTTCEEECC-SCCSHHHHHHHHHHHTSCS-EEECSC--HHHHHHH---SCCSSCEEEEEESCCHHHHHHHHHH
T ss_pred EEEEeCCccccceeec-CCCCHHHHHHHHHHhcCCc-ceeHHH--HHHHHhc---CCCceEEEEEeCCCCchHHHHHHHH
Confidence 99999998 55555 5569999999999999988 566655 8889864 34 6777788764444433 3344
Q ss_pred hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCC-C---ChhHHHhHHhcCCCccccccc
Q psy16770 281 AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNS-I---PVPTLQDITDNNPYLTLPRIS 356 (554)
Q Consensus 281 a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~-~---~~~~l~~fi~~~~~~~v~~lt 356 (554)
|..+++++.||.+. +++++++++ +++|++.. .+ ..+.+. + +...|.+||..+.+|.++++|
T Consensus 163 A~~~~~~~~F~~~~-------~~~~~~~~~-----i~l~~~~~-~~--~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t 227 (504)
T 2b5e_A 163 ANKHFNDYDFVSAE-------NADDDFKLS-----IYLPSAMD-EP--VVYNGKKADIADADVFEKWLQVEALPYFGEID 227 (504)
T ss_dssp HHHTTTTCEEEEEE-------CTTSCCEEE-----EEETTEEE-EE--EECCSCHHHHTSHHHHHHHHHHHSSCSSCBCC
T ss_pred HHHhhcCcEEEEEH-------HHHHhcCCe-----EEecCCCC-cc--cccCCcccccCCHHHHHHHHHhcccCCcccCC
Confidence 44788999999983 567777764 78887643 22 456676 6 888999999999999999999
Q ss_pred chhhhhhcCCCCceEEEEEcCCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCCCccccceEEEE
Q psy16770 357 SQSMLDAVCPVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAM 436 (554)
Q Consensus 357 ~~~~~~~~c~~~~lcvvl~~~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v 436 (554)
.++.... +..+...++++.....+.+...+.++++|++ +++ .++|+|+|++.++.+++.|-. . .++|++
T Consensus 228 ~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~--~~~-~i~F~~id~~~~~~~~~~~gl-~------~~~P~v 296 (504)
T 2b5e_A 228 GSVFAQY-VESGLPLGYLFYNDEEELEEYKPLFTELAKK--NRG-LMNFVSIDARKFGRHAGNLNM-K------EQFPLF 296 (504)
T ss_dssp HHHHHHH-HHTTSCEEEEEESSHHHHHHHHHHHHHHHHH--TTT-TCEEEEEEHHHHTTHHHHTTC-C------SCSSEE
T ss_pred HhHHHHH-hcCCCcEEEEEecCcccHHHHHHHHHHHHHh--cCC-eeEEEEEehhhhHHHHHHcCC-c------ccCCEE
Confidence 8776443 3222222233333322336788899999999 975 599999999998899998822 1 134444
Q ss_pred EEecC-CCeeEEEec-CCC--CCcccccchhhHHHHHHHHhhhcCCCCCccccccccchhhhhhhHHHHHHHHH
Q psy16770 437 WRMDY-KKIKYGWLL-GDA--VDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNR 506 (554)
Q Consensus 437 ~~~~~-~~~ky~~~~-~~~--~~~~~~~~~t~e~l~~fl~~~~~g~~~~~~~~~~lp~~~de~~~~~~~r~~~~ 506 (554)
...+. ++.+|.+.. +.+ ..-.....+|.+.|.+|+++++.|+..|..+++.+|+-++..+..+.+..|.+
T Consensus 297 ~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~ 370 (504)
T 2b5e_A 297 AIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDE 370 (504)
T ss_dssp EEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHH
T ss_pred EEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHH
Confidence 33343 557885321 200 00000001678999999999999999887777778765555555555555555
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.1e-28 Score=242.54 Aligned_cols=223 Identities=18% Similarity=0.246 Sum_probs=182.9
Q ss_pred cccccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec--CcHHHHHHhCCc
Q psy16770 124 ISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH--NEQGLARRLGVG 201 (554)
Q Consensus 124 ~~~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~--~~~~l~~~~~v~ 201 (554)
.....+++||.++|++.|. +.+++++|+|||+||++|+++.|.|+++++.+.+. +.++.|||+ .++.+|++|+|.
T Consensus 14 ~~~~~vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~~~~l~~~~~I~ 90 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNKNKALCAKYDVN 90 (298)
T ss_dssp SSCTTCEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTTTHHHHHHTTCC
T ss_pred CCCCCeEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCccCHHHHHhCCCC
Confidence 3445789999999999995 45789999999999999999999999999999874 899999998 689999999999
Q ss_pred CCCCcceeccCCe------------------EEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceE
Q psy16770 202 SQLPQIALLTDGR------------------TSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVH 263 (554)
Q Consensus 202 ~~~Pti~~~~~g~------------------~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~ 263 (554)
+ +||+++|++|+ ...|. |.++.+.|++|+.+++++.+..+.+.+++++|+.. .+++.
T Consensus 91 ~-~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~-G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~---~~~~~ 165 (298)
T 3ed3_A 91 G-FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYS-GARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRK---SPKLS 165 (298)
T ss_dssp B-SSEEEEEECCCC-------------CCCEEEECC-SCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTS---CSSEE
T ss_pred c-cceEEEEECCceeecccccccccccccccceeec-CCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhc---CCceE
Confidence 8 99999998886 45565 45699999999999999985444466889999963 36888
Q ss_pred EEEEecCCchhHHHHHHhhccCCceEEEEEEccCCCChhHH-----hHhC-----C------------CCCCceEEEEeC
Q psy16770 264 ALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVF-----QRFK-----V------------PGDKDSLLIFKE 321 (554)
Q Consensus 264 v~~f~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~-----~k~~-----i------------~~~~Ptlvvfk~ 321 (554)
+++|.+.......+...|..+++++.||.+.. .+++ ++|+ | ....|+|++|++
T Consensus 166 vi~fs~~~~~~~~f~~~A~~~~~~~~F~~v~~-----~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~ 240 (298)
T 3ed3_A 166 VVLFSKQDKISPVYKSIALDWLGKFDFYSISN-----KKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDA 240 (298)
T ss_dssp EEEEESSSSCCHHHHHHHHHTBTTEEEEEEEG-----GGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEET
T ss_pred EEEEcCCCcchHHHHHHHHHhhcCcEEEEEcc-----hHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcC
Confidence 99998777777777777778899999999964 3333 2333 2 124899999998
Q ss_pred CCCCCCceeec-CCCChhHHHhHHh--cCCCcccccccchhhh
Q psy16770 322 DKDRPSASITM-NSIPVPTLQDITD--NNPYLTLPRISSQSML 361 (554)
Q Consensus 322 ~~~~~~~~i~~-~~~~~~~l~~fi~--~~~~~~v~~lt~~~~~ 361 (554)
..+++ ..+. +.++.+.|.+||. .++.|.++++|.++.+
T Consensus 241 ~~~~~--~~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~~~ 281 (298)
T 3ed3_A 241 DKDKF--WEYEGNSINKNDISKFLRDTFSITPNEGPFSRRSEY 281 (298)
T ss_dssp TTTEE--EECCCSSCCHHHHHHHHHHHHTCCCSSSTTSHHHHH
T ss_pred CCCce--EEeccccCCHHHHHHHHHhhcCCCCCcCCCchHHHH
Confidence 66665 4555 5789999999999 8999999999986644
No 9
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.94 E-value=6.1e-25 Score=250.32 Aligned_cols=320 Identities=12% Similarity=0.083 Sum_probs=241.5
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..+.++|.++|++. .+++++|.|||+||++|+.+.|.|+++++.+++ ++.|+.|||+.++.+|++|||++ +||
T Consensus 440 ~~v~~l~~~~~~~~-----~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~~~v~~-~Pt 512 (780)
T 3apo_A 440 SHVTTLGPQNFPAS-----DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNMYNIQA-YPT 512 (780)
T ss_dssp SCEEECCTTTSCTT-----CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred CCCEecCHHHHHHc-----CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCc-CCe
Confidence 45788999999875 467999999999999999999999999999987 59999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchh-----HHHHHHh
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR-----LRYLINA 281 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~-----~~~~~~a 281 (554)
++++++|+...|.| .++.++|.+|+.+.+.++ +..++.+++++++... ..+.+.++.|....-+. ..+...|
T Consensus 513 ~~~~~~g~~~~~~g-~~~~~~l~~fi~~~~~~~-v~~l~~~~f~~~v~~~-~~~~~~lv~F~ap~C~~c~~~~p~~~~lA 589 (780)
T 3apo_A 513 TVVFNQSSIHEYEG-HHSAEQILEFIEDLRNPS-VVSLTPSTFNELVKQR-KHDEVWMVDFYSPWSHPSQVLMPEWKRMA 589 (780)
T ss_dssp EEEEETTEEEEECS-CSCHHHHHHHHHHHHSCS-EEECCHHHHHHHTTTC-CTTCCEEEEEECTTCHHHHHHHHHHHHHH
T ss_pred EEEEcCCceeeecC-cccHHHHHHHHHhhcccc-eeecCcccHHHHhhcc-CCCCeEEEEEECCCCHHHHHhhHHHHHHH
Confidence 99999898866664 468899999999999887 6778888999988542 22455555554322111 1122223
Q ss_pred hccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCC-CceeecC-CCChhHHHhHHhcCCCcccccccchh
Q psy16770 282 FKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRP-SASITMN-SIPVPTLQDITDNNPYLTLPRISSQS 359 (554)
Q Consensus 282 ~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~-~~~i~~~-~~~~~~l~~fi~~~~~~~v~~lt~~~ 359 (554)
..+++.+.|+.++++ .+..++++|+|++ +|++++|+.+.... ....+.+ ..+.+.|.+|+..+..+.+.+++..+
T Consensus 590 ~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~ 666 (780)
T 3apo_A 590 RTLTGLINVGSVDCG--QYHSFCTQENVQR-YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQT 666 (780)
T ss_dssp HHHTTTSEEEEEETT--TTHHHHHHTTCCS-SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHH
T ss_pred HHhhCCeEEEEEECc--chHHHHHHcCCCC-CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHH
Confidence 356788999999998 6788999999997 99999998754421 1234667 78899999999999988899999877
Q ss_pred hhhhcCCCCceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCCCccccceEEEEEE
Q psy16770 360 MLDAVCPVKKLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWR 438 (554)
Q Consensus 360 ~~~~~c~~~~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v~~ 438 (554)
+.+.++..++.++|.|. +....+....+.+.++|++ +++ .+.|++||++..+++++.+-.. ..|.+.++ .
T Consensus 667 ~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~--~~~-~~~~~~vd~~~~~~~~~~~~v~-----~~Pt~~~~-~ 737 (780)
T 3apo_A 667 FNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARM--IKG-KVRAGKVDCQAYPQTCQKAGIK-----AYPSVKLY-Q 737 (780)
T ss_dssp HHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHH--HTT-TCEEEEEETTTCHHHHHHTTCC-----SSSEEEEE-E
T ss_pred HHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHH--hcC-CceEEEEECCCCHHHHHhcCCC-----cCCEEEEE-c
Confidence 76666545566666665 4555667778899999998 864 5999999999999999888111 11333333 3
Q ss_pred ecCCCeeEEEec-CCCCCcccccchhhHHHHHHHHhhhcC
Q psy16770 439 MDYKKIKYGWLL-GDAVDDWKDYNTTKDRLDAGLRSLVND 477 (554)
Q Consensus 439 ~~~~~~ky~~~~-~~~~~~~~~~~~t~e~l~~fl~~~~~g 477 (554)
......++.-.. | ..+.+.|.++|++.++.
T Consensus 738 ~g~~~~~~~G~~~g---------~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 738 YERAKKSIWEEQIN---------SRDAKTIAALIYGKLET 768 (780)
T ss_dssp EETTTTEEEEEEEC---------CCCHHHHHHHHHHHTTC
T ss_pred CCCccccccCcccC---------CcCHHHHHHHHHHHHHH
Confidence 222223443221 1 24778999999998854
No 10
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.92 E-value=2.4e-24 Score=209.84 Aligned_cols=209 Identities=18% Similarity=0.270 Sum_probs=166.6
Q ss_pred cccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCC--EEEEEEEecCcHHHHHHhCCcCC
Q psy16770 126 LFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQ 203 (554)
Q Consensus 126 ~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~--v~~~~Vd~~~~~~l~~~~~v~~~ 203 (554)
...+..||.++|+..+ ..+++++|+|||+||++|+.+.|.|+++++.+++.+ +.++.|||+.++.+|++|+|++
T Consensus 14 ~~~v~~l~~~~~~~~~---~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~- 89 (241)
T 3idv_A 14 ENGVLVLNDANFDNFV---ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSG- 89 (241)
T ss_dssp ETTEEEECTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS-
T ss_pred CCCcEEecccCHHHHH---hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCc-
Confidence 3468899999999988 467899999999999999999999999999997543 9999999999999999999997
Q ss_pred CCcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC------ccccCCcccHHHHHhhhhcCCceEEEEEecC-------
Q psy16770 204 LPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK------LIVPLSATNVDAFLDNWREDNKVHALLFQRS------- 270 (554)
Q Consensus 204 ~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~------~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~------- 270 (554)
+||+++|++|+.+.+.|+ ++.+.|.+|+.+.+.+. .+..++.+++++++.. ++++++.|...
T Consensus 90 ~Pt~~~~~~g~~~~~~g~-~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~f~a~wC~~C~~ 164 (241)
T 3idv_A 90 YPTIKILKKGQAVDYEGS-RTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVND----ADIILVEFYAPWCGHCKK 164 (241)
T ss_dssp SSEEEEEETTEEEECCSC-SCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHH----CSEEEEEEECTTCTGGGG
T ss_pred CCEEEEEcCCCcccccCc-ccHHHHHHHHhhccCcccccccccceeccHHHHHHhhcc----CCeEEEEEECCCCHHHHH
Confidence 999999999998876655 58899999999876442 3556788999988853 56777766432
Q ss_pred CchhHHHHHHhhcc-CCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcCCC
Q psy16770 271 LPVRLRYLINAFKH-RTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPY 349 (554)
Q Consensus 271 ~~~~~~~~~~a~~~-~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~~~ 349 (554)
..+.+...+..... ...+.|+.++++ .+.+++++|+|.+ .||+++|+++. + ..+.|..+...|.+||..+.-
T Consensus 165 ~~p~~~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt~~~~~~g~--~--~~~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 165 LAPEYEKAAKELSKRSPPIPLAKVDAT--AETDLAKRFDVSG-YPTLKIFRKGR--P--YDYNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp THHHHHHHHHHHHTSSSCCCEEEEETT--TCHHHHHHTTCCS-SSEEEEEETTE--E--EECCSCCSHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhccCCcEEEEEEECC--CCHHHHHHcCCcc-cCEEEEEECCe--E--EEecCCCCHHHHHHHHHhhhC
Confidence 22333333333321 244999999987 6889999999997 99999998743 2 336888899999999987644
Q ss_pred c
Q psy16770 350 L 350 (554)
Q Consensus 350 ~ 350 (554)
+
T Consensus 238 ~ 238 (241)
T 3idv_A 238 A 238 (241)
T ss_dssp C
T ss_pred C
Confidence 3
No 11
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.90 E-value=7.4e-23 Score=200.38 Aligned_cols=206 Identities=11% Similarity=0.184 Sum_probs=163.2
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCC--CCEEEEEEEe--cCcHHHHHHhCCcC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHV--HNEQGLARRLGVGS 202 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~--~~v~~~~Vd~--~~~~~l~~~~~v~~ 202 (554)
+.+.+||.++|+..+. ..+++++|+|||+||++|+++.|.|+++++.+.+ .++.+++||| +.+..+|++|+|.+
T Consensus 12 ~~v~~l~~~~f~~~i~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 12 DPLTLLQADTVRGAVL--GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp SSSEEECTTTHHHHHS--SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCceeCChhhHHHHHh--hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 4688999999999886 4458999999999999999999999999999985 3599999999 67899999999997
Q ss_pred CCCcceeccCC------eEEEEeCCcccHHHHHHHHHHhCCCCc---------cccCCcccHHHHHhhhhcCCceEEEEE
Q psy16770 203 QLPQIALLTDG------RTSFFKEPSFSVQKMVEFFRLKLPYKL---------IVPLSATNVDAFLDNWREDNKVHALLF 267 (554)
Q Consensus 203 ~~Pti~~~~~g------~~~~y~~g~~~~~~i~~fl~~~~~~~~---------v~~~t~~~~~~fl~~~~~~~~~~v~~f 267 (554)
+||+++|.+| ... +.+| ++.+.|.+++.+.++... ...++.+++..|+.. ...++.+++|
T Consensus 90 -~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~--~~~~~~al~f 164 (244)
T 3q6o_A 90 -FPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFAR--NNEEYLALIF 164 (244)
T ss_dssp -SSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHH--CCCSEEEEEE
T ss_pred -cCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhc--CCCceEEEEE
Confidence 9999999863 344 5556 488999999988764431 234567888888875 4678889999
Q ss_pred ecCCchhHHHHHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHh
Q psy16770 268 QRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 345 (554)
Q Consensus 268 ~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~ 345 (554)
.+......+.....+.....+.++.+.. .+..++++|+|++ +|++++|.++.... .+....-..+.+..+++
T Consensus 165 ~~~~~~~~~~~~~d~~~~~~i~v~~~~~---~~~~l~~~f~v~~-~Pslvl~~~~g~~~--~~~~~~~~r~~~~~~l~ 236 (244)
T 3q6o_A 165 EXGGSYLAREVALDLSQHKGVAVRRVLN---TEANVVRKFGVTD-FPSCYLLFRNGSVS--RVPVLMESRSFYTAYLQ 236 (244)
T ss_dssp ECTTCCHHHHHHHHTTTCTTEEEEEEET---TCHHHHHHHTCCC-SSEEEEEETTSCEE--ECCCSSSSHHHHHHHHH
T ss_pred EECCcchHHHHHHHhccCCceEEEEEeC---chHHHHHHcCCCC-CCeEEEEeCCCCeE--eeccccccHHHHHHHHH
Confidence 9888777777777776667899988864 3589999999997 99999998754421 23333334555666665
No 12
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.86 E-value=6.2e-21 Score=205.56 Aligned_cols=188 Identities=13% Similarity=0.245 Sum_probs=154.7
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCC--CCEEEEEEEecC--cHHHHHHhCCcC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVHN--EQGLARRLGVGS 202 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~--~~v~~~~Vd~~~--~~~l~~~~~v~~ 202 (554)
+.+.+||.++|+..+. +++++++|.|||+||++|+++.|.|+++++++++ .++.+++|||+. +.++|++|+|.+
T Consensus 12 ~~V~~Lt~~~f~~~v~--~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 12 DPLTLLDADSVRPTVL--GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp SSSEEECTTTHHHHHS--SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCcEECChHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 4588999999999886 4568999999999999999999999999999985 259999999954 899999999997
Q ss_pred CCCcceeccC----CeEE-EEeCCcccHHHHHHHHHHhCCCCc---------cccCCcccHHHHHhhhhcCCceEEEEEe
Q psy16770 203 QLPQIALLTD----GRTS-FFKEPSFSVQKMVEFFRLKLPYKL---------IVPLSATNVDAFLDNWREDNKVHALLFQ 268 (554)
Q Consensus 203 ~~Pti~~~~~----g~~~-~y~~g~~~~~~i~~fl~~~~~~~~---------v~~~t~~~~~~fl~~~~~~~~~~v~~f~ 268 (554)
+||+++|.+ |+.. .+.|+ ++.+.|.+++.+.++... +..++.+++++|+.. ...++++++|.
T Consensus 90 -~PTl~~f~~g~~~G~~~~~~~g~-~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~--~~~~~vallF~ 165 (519)
T 3t58_A 90 -FPTVRFFQAFTKNGSGATLPGAG-ANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTR--NKADYLALVFE 165 (519)
T ss_dssp -BSEEEEECTTCCSCCCEEECCSS-CCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGS--CCCSEEEEEEE
T ss_pred -cCEEEEEcCcccCCCceeEecCC-CCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhcc--CCCCeEEEEec
Confidence 999999974 4443 44445 689999999998765432 345667888888876 46788999999
Q ss_pred cCCchhHHHHHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCC
Q psy16770 269 RSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKD 324 (554)
Q Consensus 269 ~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~ 324 (554)
++.+...+.....+.....+.++.+.. .+.+++++|+|+. +|++++|++++.
T Consensus 166 ~~~s~~~~~~~ldl~~~~~v~v~~v~~---~~~~l~~kfgV~~-~Pslvl~~~nGk 217 (519)
T 3t58_A 166 REDSYLGREVTLDLSQYHAVAVRRVLN---TESDLVNKFGVTD-FPSCYLLLRNGS 217 (519)
T ss_dssp CTTCCHHHHHHHHTTTCTTEEEEEEET---TCHHHHHHHTCCC-SSEEEEEETTSC
T ss_pred CCchHHHHHHHHHhhccCCeeEEEecC---chHHHHHHcCCCC-CCeEEEEeCCCc
Confidence 888777777777776667899998864 4689999999997 999999987554
No 13
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.83 E-value=1.9e-19 Score=176.95 Aligned_cols=236 Identities=11% Similarity=0.138 Sum_probs=159.5
Q ss_pred HhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhh-ccCCceEEEEEEccCCCChhHHhHhCCCCC
Q psy16770 234 LKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGD 312 (554)
Q Consensus 234 ~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~ 312 (554)
++++|++..+.+.++++.|+.. +..++|++|.+..++....+..++ .+++++.||.+ .+++++++|+++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~---~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~-----~~~~v~~~~~~~-- 71 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISD---KDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHT-----NVESLVNEYDDN-- 71 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTS---SSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEE-----CCHHHHHHHCSS--
T ss_pred CcCCCCceeecCHHHHHHHhhc---CCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEE-----ChHHHHHHhCCC--
Confidence 3566774444366889999953 345566677765666656665555 77899999999 678899999998
Q ss_pred CceEEEEeCC----CCCCCceee-cCCCChhHHHhHHhcCCCcccccccchhhhhhcCCCCceEEEEEcCCCCcc----h
Q psy16770 313 KDSLLIFKED----KDRPSASIT-MNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSPEH----D 383 (554)
Q Consensus 313 ~Ptlvvfk~~----~~~~~~~i~-~~~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~c~~~~lcvvl~~~~~~~~----~ 383 (554)
.|+|++|++. ........+ .++++...|.+||..+.+|+++++|.++.... . ..++|++++..+.... +
T Consensus 72 ~p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~-~-~~~~~v~~~~~~~~~~~~~~~ 149 (252)
T 2h8l_A 72 GEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI-Q-GKDLLIAYYDVDYEKNAKGSN 149 (252)
T ss_dssp SEEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHH-S-SSSEEEEEECCBTTTBHHHHH
T ss_pred CCcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhh-c-CCCeEEEEeecchhhcchhHH
Confidence 4999999963 111122456 78889999999999999999999999887654 3 4578887776443222 3
Q ss_pred hHHHHHHHHHhhccCCC--CceEEEEEecccchHHHHhhCCCCCCccccceEEEEEEecCCCeeEEEecCCCCCcccccc
Q psy16770 384 ASRHTLRRFAQESRFVH--NNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYN 461 (554)
Q Consensus 384 ~~~~~l~~~a~~~~~~~--~~v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ky~~~~~~~~~~~~~~~ 461 (554)
.+++.++++|++ +++ ..+.|+|+|++.+..+++.|-... .. ..+|++.+.+.++.+|. +++ +
T Consensus 150 ~~~~~~~~vA~~--~~~k~~~~~F~~~d~~~~~~~~~~fgl~~--~~--~~~P~v~i~~~~~~ky~-~~~---------~ 213 (252)
T 2h8l_A 150 YWRNRVMMVAKK--FLDAGHKLNFAVASRKTFSHELSDFGLES--TA--GEIPVVAIRTAKGEKFV-MQE---------E 213 (252)
T ss_dssp HHHHHHHHHHHH--HHHTTCCCEEEEEETTTTHHHHGGGTCCC--CS--CSSCEEEEECTTSCEEE-CCS---------C
T ss_pred HHHHHHHHHHHH--ccccCceEEEEEEchHHHHHHHHHcCCCC--cc--CCCCEEEEEeCcCcEec-CCc---------c
Confidence 578899999999 874 249999999998888877772200 11 24555555555677885 443 3
Q ss_pred hhhHH--HHHHHHhhhcCCCCCccccccccchhhhhhh
Q psy16770 462 TTKDR--LDAGLRSLVNDPYNNLLYDTALKEISDEYIQ 497 (554)
Q Consensus 462 ~t~e~--l~~fl~~~~~g~~~~~~~~~~lp~~~de~~~ 497 (554)
+|.++ |.+|+++++.|+..|.-+++++|+-+|+++.
T Consensus 214 ~t~~~~~i~~F~~~~~~Gkl~~~~kSe~iPe~~~~pV~ 251 (252)
T 2h8l_A 214 FSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGAAA 251 (252)
T ss_dssp CCTTSHHHHHHHHHHHHTCSCCCC--------------
T ss_pred cCcchHHHHHHHHHHHCCCccccccCCCCCCCCCCCCC
Confidence 67778 9999999999999988899999999887764
No 14
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.83 E-value=2e-19 Score=176.55 Aligned_cols=232 Identities=15% Similarity=0.094 Sum_probs=158.8
Q ss_pred hCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhh-ccCCceEEEEEEccCCCChhHHhHhCCCCCC
Q psy16770 235 KLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDK 313 (554)
Q Consensus 235 ~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~ 313 (554)
+++|++..+.+.+++++|+.. ++..++|++|.+..++....+..++ .+++++.||.+ .+++++++++++ .
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~--~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t-----~~~~v~~~~~v~--~ 73 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKD--GDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHT-----FSTEIAKFLKVS--L 73 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHH--CSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEE-----CCHHHHHHHTCC--S
T ss_pred CCCCCceecCCHHHHHHHHhc--CCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEE-----CcHHHHHHcCCC--C
Confidence 456774444455889999853 1355566677666666666666666 67899999999 688999999997 4
Q ss_pred ceEEEEeCC------CCCCCceeec--CCCChhHHHhHHhcCCCcccccccchhhhhhcCCCCceEEEEEcCCC-----C
Q psy16770 314 DSLLIFKED------KDRPSASITM--NSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDS-----P 380 (554)
Q Consensus 314 Ptlvvfk~~------~~~~~~~i~~--~~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~c~~~~lcvvl~~~~~-----~ 380 (554)
|+|++|++. .+.. ..+. +.++...|.+||+.+.+|+++++|.++..... ..+.+|++++..+. +
T Consensus 74 p~ivlfk~~~~~~kfde~~--~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~-~~~~l~~~~~~~d~~~~~~~ 150 (250)
T 3ec3_A 74 GKLVLMQPEKFQSKYEPRM--HVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRY-SKRPLVVVYYSVDFSFDYRT 150 (250)
T ss_dssp SEEEEECCGGGCCTTSCSC--EEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHS-CSSSEEEEEECCCCSTTTHH
T ss_pred CeEEEEecchhhccccccc--eeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhh-ccCccEEEEEecccccccch
Confidence 999999963 2222 3455 57889999999999999999999988875544 24567777765332 1
Q ss_pred cchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCCCccccceEEEEEEecCCCeeEEEecCCCCCccccc
Q psy16770 381 EHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDY 460 (554)
Q Consensus 381 ~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ky~~~~~~~~~~~~~~ 460 (554)
+.+.+++.++++|++ |+ ++.|+|+|++++...++.|-.. ..... |.+.+.+.++.+|.+..+
T Consensus 151 ~~~~~~~~~~~vAk~--~k--ki~F~~~d~~~~~~~l~~fgl~----~~~~~-p~~~~~~~~~~ky~~~~~--------- 212 (250)
T 3ec3_A 151 ATQFWRNKVLEVAKD--FP--EYTFAIADEEDYATEVKDLGLS----ESGGD-VNAAILDESGKKFAMEPE--------- 212 (250)
T ss_dssp HHHHHHHHHHHHHTT--CT--TSEEEEEETTTTHHHHHHTTCS----SCSCS-CEEEEECTTSCEEECCCC---------
T ss_pred hHHHHHHHHHHHHHh--hc--ceeEEEEcHHHHHHHHHHcCCC----ccCCC-cEEEEEcCCCceecCCcc---------
Confidence 234578899999999 98 5999999998888888877111 11111 333444666789965322
Q ss_pred chhhHHHHHHHHhhhcCCCCCccccccccchhhhhh
Q psy16770 461 NTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYI 496 (554)
Q Consensus 461 ~~t~e~l~~fl~~~~~g~~~~~~~~~~lp~~~de~~ 496 (554)
++|.+.|.+|+++++.|+..|.-++++||+-+|+++
T Consensus 213 ~~t~~~i~~Fv~~~~~Gkl~p~~kSepiPe~~~~pV 248 (250)
T 3ec3_A 213 EFDSDALREFVMAFKKGKLKPVIKSQPVPKNNKGAA 248 (250)
T ss_dssp SCCHHHHHHHHHHHHTTCCCCCC-------------
T ss_pred cCCHHHHHHHHHHHHCCCccceeecCCCCCCCCCCC
Confidence 478999999999999999999999999999987665
No 15
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=1.9e-20 Score=148.86 Aligned_cols=70 Identities=44% Similarity=0.838 Sum_probs=66.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 18 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 18 ~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
..|||+||||+++++.++||+|||+|++++|||+++++.+.++|+.|++||++|+||.+|+.||.+|..+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 3699999999999999999999999999999999998899999999999999999999999999998754
No 16
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.8e-20 Score=149.40 Aligned_cols=73 Identities=48% Similarity=0.797 Sum_probs=68.8
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
+....|||+||||+++++.++||+|||+|+++||||+++.+++.++|++|++||++|+||.+|+.||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3457899999999999999999999999999999999998899999999999999999999999999998754
No 17
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=2.1e-20 Score=152.54 Aligned_cols=73 Identities=45% Similarity=0.818 Sum_probs=68.6
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
+....|||+||||++.++.++||+|||+|+++||||+++++.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 3457899999999999999999999999999999999998889999999999999999999999999988654
No 18
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=5.7e-20 Score=146.95 Aligned_cols=73 Identities=53% Similarity=0.860 Sum_probs=67.8
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~-~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
.....|||+||||+++++.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 345789999999999999999999999999999999997 4788999999999999999999999999998753
No 19
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=5.3e-20 Score=150.14 Aligned_cols=73 Identities=52% Similarity=1.002 Sum_probs=68.7
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
.....|||+||||+++++.++||+|||+|+++||||+++++.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 3457899999999999999999999999999999999998899999999999999999999999999998753
No 20
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=9.6e-20 Score=146.73 Aligned_cols=73 Identities=45% Similarity=0.834 Sum_probs=66.9
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh--hHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP--TAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~--~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
+....|||+||||+++++.++||+|||+|+++||||+++.. .+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34568999999999999999999999999999999999753 67889999999999999999999999998754
No 21
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.78 E-value=7.1e-20 Score=154.00 Aligned_cols=70 Identities=47% Similarity=0.858 Sum_probs=66.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 18 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 18 ~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~-~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
..|||+||||+++++.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999997 4778999999999999999999999999999876
No 22
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.78 E-value=2e-19 Score=141.34 Aligned_cols=67 Identities=40% Similarity=0.730 Sum_probs=62.2
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCC
Q psy16770 17 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGT 85 (554)
Q Consensus 17 ~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~ 85 (554)
...|||+||||+++++.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+|.
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 46899999999999999999999999999999999864 36899999999999999999999999885
No 23
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.78 E-value=2.3e-19 Score=151.86 Aligned_cols=98 Identities=20% Similarity=0.404 Sum_probs=87.5
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccC
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 212 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~ 212 (554)
+.++|++.+.. ..+++++|.|||+||++|+.+.|.|+++++.+. ++.+++||+++++++|++|+|++ +||+++|++
T Consensus 7 ~~~~f~~~l~~-~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~~~~l~~~~~V~~-~PT~~~~~~ 82 (105)
T 3zzx_A 7 DQEDFTKQLNE-AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDECEDIAQDNQIAC-MPTFLFMKN 82 (105)
T ss_dssp SHHHHHHHHHH-TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCCB-SSEEEEEET
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECCCCCCccCCCcchhhhhhccC--CeEEEEEecccCHHHHHHcCCCe-ecEEEEEEC
Confidence 45789888753 347899999999999999999999999999886 48999999999999999999998 999999999
Q ss_pred CeEEEEeCCcccHHHHHHHHHHh
Q psy16770 213 GRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 213 g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
|+.+.+..|. +.+.|.+|+.++
T Consensus 83 G~~v~~~~G~-~~~~l~~~i~k~ 104 (105)
T 3zzx_A 83 GQKLDSLSGA-NYDKLLELVEKN 104 (105)
T ss_dssp TEEEEEEESC-CHHHHHHHHHHH
T ss_pred CEEEEEEeCc-CHHHHHHHHHhc
Confidence 9998888785 789999999864
No 24
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=147.66 Aligned_cols=73 Identities=42% Similarity=0.756 Sum_probs=67.1
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--hhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~--~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
+....|||+||||+++++.++||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||..|..+
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 3456899999999999999999999999999999999975 367899999999999999999999999998765
No 25
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.77 E-value=2.5e-18 Score=165.77 Aligned_cols=188 Identities=14% Similarity=0.166 Sum_probs=137.0
Q ss_pred CCCcEEEEEEcc-cccccccchHHHHHHHHHhCCCCEEEEEEEecC--cHHHHHHhCCcCCCCcceeccCCeE--EEEeC
Q psy16770 146 YTTPHLILFYSD-WCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--EQGLARRLGVGSQLPQIALLTDGRT--SFFKE 220 (554)
Q Consensus 146 ~~~~~lV~Fya~-wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~--~~~l~~~~~v~~~~Pti~~~~~g~~--~~y~~ 220 (554)
.+.+++|.||++ ||++|+.+.|.|+++++. .+ ++.+++|||+. ++++|++|||.+ +||+++|++|+. ..|.|
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~~~~~~~~~~~~~v~~-~Pt~~~~~~g~~~~~~~~G 97 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFDTPEGKELAKRYRIDR-APATTITQDGKDFGVRYFG 97 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETTSHHHHHHHHHTTCCS-SSEEEEEETTBCCSEEEES
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCCCcccHHHHHHcCCCc-CceEEEEcCCceeeEEEec
Confidence 456778999999 999999999999999865 34 59999999999 999999999997 999999988864 45655
Q ss_pred CcccHHHHHHHHHHhCCCC-ccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-----HHhhccC----CceEE
Q psy16770 221 PSFSVQKMVEFFRLKLPYK-LIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHR----TTIVF 290 (554)
Q Consensus 221 g~~~~~~i~~fl~~~~~~~-~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-----~~a~~~~----~~v~F 290 (554)
. ++.+.+.+|+...+... ....+++++++.... ...++.++.|....-++.+.. ..+..+. +.+.|
T Consensus 98 ~-~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~ 173 (226)
T 1a8l_A 98 L-PAGHEFAAFLEDIVDVSREETNLMDETKQAIRN---IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILG 173 (226)
T ss_dssp C-CCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTT---CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred c-CcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHh---cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEE
Confidence 4 56788999988754211 133456677766542 134443666644332222111 1122333 58999
Q ss_pred EEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 291 GVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 291 g~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+.++++ .+.+++++|+|.+ .||+++|+++.. ...+.|..+...|.+||+.
T Consensus 174 ~~vd~~--~~~~l~~~~~v~~-~Pt~~~~~~G~~---~~~~~G~~~~~~l~~~l~~ 223 (226)
T 1a8l_A 174 DMVEAI--EYPEWADQYNVMA-VPKIVIQVNGED---RVEFEGAYPEKMFLEKLLS 223 (226)
T ss_dssp EEEEGG--GCHHHHHHTTCCS-SCEEEEEETTEE---EEEEESCCCHHHHHHHHHH
T ss_pred EEEEcc--cCHHHHHhCCCcc-cCeEEEEeCCce---eEEEcCCCCHHHHHHHHHH
Confidence 999987 6889999999997 999999986432 1356777888888888864
No 26
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.77 E-value=9.4e-19 Score=153.10 Aligned_cols=105 Identities=12% Similarity=0.142 Sum_probs=91.4
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhC----CCCEEEEEEEecCcHHHHHHhCCcC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS----PLGVGFFTVHVHNEQGLARRLGVGS 202 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~----~~~v~~~~Vd~~~~~~l~~~~~v~~ 202 (554)
..+.+||.++|++.+. +.+++++|.|||+||++|+++.|.|+++++.+. ..++.+++|||++++++|++|+|.+
T Consensus 15 ~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 15 SRVVELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCEECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CceEECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 4688999999999986 357899999999999999999999999998763 2259999999999999999999997
Q ss_pred CCCcceeccCCeE---EEEeCCcccHHHHHHHHHHh
Q psy16770 203 QLPQIALLTDGRT---SFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 203 ~~Pti~~~~~g~~---~~y~~g~~~~~~i~~fl~~~ 235 (554)
+||+++|++|.. ..|.|+ ++.+.|.+|+.+.
T Consensus 93 -~Pt~~~~~~g~~~~~~~~~G~-~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 -FPTMRYYTRIDKQEPFEYSGQ-RYLSLVDSFVFQN 126 (127)
T ss_dssp -SSEEEEECSSCSSSCEECCSC-CCHHHHHHHHHHH
T ss_pred -CCEEEEEeCCCCCCceEecCC-ccHHHHHHHHHhc
Confidence 999999988764 456554 6999999999875
No 27
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=6.5e-19 Score=146.90 Aligned_cols=71 Identities=34% Similarity=0.563 Sum_probs=66.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCChHHHHhhhccCCC
Q psy16770 16 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 86 (554)
Q Consensus 16 ~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~-~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~ 86 (554)
....|||+||||++.++.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||.....
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 45689999999999999999999999999999999996 577899999999999999999999999996654
No 28
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.76 E-value=8.2e-18 Score=162.55 Aligned_cols=183 Identities=12% Similarity=0.108 Sum_probs=134.9
Q ss_pred CCcEEEEEE-----cccccccccchHHHHHHHHHh--CCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeE-EEE
Q psy16770 147 TTPHLILFY-----SDWCFACLQVEPIFKKLMDEL--SPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT-SFF 218 (554)
Q Consensus 147 ~~~~lV~Fy-----a~wC~~C~~l~p~~~~~a~~l--~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~-~~y 218 (554)
..+++|.|| +|||+||+.+.|+|+++++.+ .+ .+.+++|||+.++++|++|||++ +||+++|++|.. ..|
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-~Ptl~~~~~~~~~~~~ 97 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQD-KIKLDIYSPFTHKEETEKYGVDR-VPTIVIEGDKDYGIRY 97 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTT-TEEEEEECTTTCHHHHHHTTCCB-SSEEEEESSSCCCEEE
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCC-ceEEEEecCcccHHHHHHcCCCc-CcEEEEECCCccccee
Confidence 346666666 899999999999999999888 44 59999999999999999999997 999999987654 556
Q ss_pred eCCcccHHHHHHHHHHhCC--CCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEE
Q psy16770 219 KEPSFSVQKMVEFFRLKLP--YKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFG 291 (554)
Q Consensus 219 ~~g~~~~~~i~~fl~~~~~--~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg 291 (554)
.|. ++.+++.+|+...+. .. +..+++++++.... ....+.++.|....-+...... .+..+ +.+.|+
T Consensus 98 ~G~-~~~~~l~~~~~~~~~~~~~-~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~ 171 (229)
T 2ywm_A 98 IGL-PAGLEFTTLINGIFHVSQR-KPQLSEKTLELLQV---VDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSK 171 (229)
T ss_dssp ESC-CCTTHHHHHHHHHHHHHTT-CCSCCHHHHHHHTT---CCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEE
T ss_pred cCC-ccHHHHHHHHHHHHhccCC-ccCCCHHHHHHHHh---cCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEE
Confidence 655 577999999987643 22 45667788877663 2344445555443323222111 12233 689999
Q ss_pred EEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 292 VIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 292 ~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
.++++ .+.+++++|+|.+ .|++++ ++ . . ..+.|..+...|.+|++.
T Consensus 172 ~vd~~--~~~~l~~~~~v~~-~Pt~~~--~G-~-~--~~~~G~~~~~~l~~~l~~ 217 (229)
T 2ywm_A 172 VIDAS--ENQDLAEQFQVVG-VPKIVI--NK-G-V--AEFVGAQPENAFLGYIMA 217 (229)
T ss_dssp EEEGG--GCHHHHHHTTCCS-SSEEEE--GG-G-T--EEEESCCCHHHHHHHHHH
T ss_pred EEECC--CCHHHHHHcCCcc-cCEEEE--CC-E-E--EEeeCCCCHHHHHHHHHH
Confidence 99987 6889999999997 999998 22 2 2 336778888888888864
No 29
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.75 E-value=5.5e-19 Score=146.20 Aligned_cols=71 Identities=30% Similarity=0.666 Sum_probs=65.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------hhHHHHHHHHHHHHHHcCChHHHHhhhccCCC
Q psy16770 16 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-------PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 86 (554)
Q Consensus 16 ~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~-------~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~ 86 (554)
....|||+||||+++++.++||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||.....
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 346899999999999999999999999999999999863 56889999999999999999999999998754
No 30
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=1.1e-18 Score=148.09 Aligned_cols=73 Identities=36% Similarity=0.718 Sum_probs=67.8
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~-~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
+....|||+||||+++|+.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 456789999999999999999999999999999999997 4778999999999999999999999999988653
No 31
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=6e-19 Score=150.52 Aligned_cols=72 Identities=33% Similarity=0.547 Sum_probs=67.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 16 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 16 ~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~-~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
....|||+||||+++|+.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 45689999999999999999999999999999999997 5789999999999999999999999999988654
No 32
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=5.7e-19 Score=146.81 Aligned_cols=69 Identities=46% Similarity=0.854 Sum_probs=64.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--hhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 19 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 19 ~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~--~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
.|||+||||+++++.++||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 589999999999999999999999999999999975 357899999999999999999999999998765
No 33
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.74 E-value=1.6e-17 Score=171.87 Aligned_cols=210 Identities=15% Similarity=0.151 Sum_probs=156.1
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec--CcHHHHHHhCCcC-C
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGS-Q 203 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~--~~~~l~~~~~v~~-~ 203 (554)
..+.++|.++|...+. +..++++|.||++||++|+++.|.|+++|+.+++. +.|+.|||+ .++.+|+.|||++ .
T Consensus 117 p~v~~~~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~~~~~~~~~fgi~~~~ 193 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHTDNQRILEFFGLKKEE 193 (361)
T ss_dssp CSEEECSTTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSGGGHHHHHHTTCCTTT
T ss_pred CcceecCcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChHHHHHHHHHcCCCccC
Confidence 4577889999988764 33457899999999999999999999999999984 999999999 6899999999972 3
Q ss_pred CCcceeccCCe-EEEEe--CCcccHHHHHHHHHHhCCC-----------------CccccCCcccHHHHHhhhhcCCceE
Q psy16770 204 LPQIALLTDGR-TSFFK--EPSFSVQKMVEFFRLKLPY-----------------KLIVPLSATNVDAFLDNWREDNKVH 263 (554)
Q Consensus 204 ~Pti~~~~~g~-~~~y~--~g~~~~~~i~~fl~~~~~~-----------------~~v~~~t~~~~~~fl~~~~~~~~~~ 263 (554)
+|+++++..|. ...|. ++..+.+.|.+|+.+.+.. ..+..++.+++++++. ..++++
T Consensus 194 ~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~---~~~k~~ 270 (361)
T 3uem_A 194 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAF---DEKKNV 270 (361)
T ss_dssp CSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHT---CTTCEE
T ss_pred CccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcc---cCCCcE
Confidence 99999997754 34454 3567999999999986421 1245567788888774 246677
Q ss_pred EEEEecCCc-------hhHHHHHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCC
Q psy16770 264 ALLFQRSLP-------VRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIP 336 (554)
Q Consensus 264 v~~f~~~~~-------~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~ 336 (554)
++.|...-- +.+...+........+.|+.++++. +. +++|+|.+ +||+++|+.+.... ...+.|..+
T Consensus 271 lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~--~~--~~~~~v~~-~Pt~~~~~~~~~~~-~~~~~G~~~ 344 (361)
T 3uem_A 271 FVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA--NE--VEAVKVHS-FPTLKFFPASADRT-VIDYNGERT 344 (361)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT--CB--CSSCCCCS-SSEEEEECSSSSCC-CEECCSCSS
T ss_pred EEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc--cc--hhhcCCcc-cCeEEEEECCCCcc-eeEecCCCC
Confidence 777643322 2233333333323459999999863 22 78999997 99999997653322 245778899
Q ss_pred hhHHHhHHhcCC
Q psy16770 337 VPTLQDITDNNP 348 (554)
Q Consensus 337 ~~~l~~fi~~~~ 348 (554)
.+.|.+||+.+.
T Consensus 345 ~~~l~~~l~~~~ 356 (361)
T 3uem_A 345 LDGFKKFLESGG 356 (361)
T ss_dssp HHHHHHHHTTTS
T ss_pred HHHHHHHHHhcC
Confidence 999999999874
No 34
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.74 E-value=1.9e-18 Score=151.49 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=94.2
Q ss_pred cccccccccccccCCCCCCcEEEEEEcccc--cccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 130 LSTTHWNFEKNYIPKSYTTPHLILFYSDWC--FACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 130 ~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC--~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
..+|.++|++.|. +++++++|.|||+|| ++|+.+.|.++++++++.+ ++++++||.+++++++.+|||++ +||+
T Consensus 18 ~~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~~~la~~ygV~s-iPTl 93 (137)
T 2qsi_A 18 TLVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAERGLMARFGVAV-CPSL 93 (137)
T ss_dssp EEECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGHHHHHHHHTCCS-SSEE
T ss_pred cccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCCHHHHHHcCCcc-CCEE
Confidence 3789999999985 344599999999999 9999999999999999987 59999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++|++|+.+....|..+.+.|.+++.+.+
T Consensus 94 ilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 94 AVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999988888888899999998765
No 35
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.74 E-value=5.9e-19 Score=145.10 Aligned_cols=69 Identities=36% Similarity=0.718 Sum_probs=63.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 17 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 17 ~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
...|||+||||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+|..+
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 74 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG--DTEKFKEISEAFEILNDPQKREIYDQYGLEA 74 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC--CHHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence 46799999999999999999999999999999999854 3579999999999999999999999998764
No 36
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.73 E-value=6.2e-18 Score=144.42 Aligned_cols=105 Identities=20% Similarity=0.309 Sum_probs=95.5
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
+++||.++|++.+ .+++++|.||++||++|+.+.|.++++++.+++ ++.++.||++.++++|++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQETAGKYGVMS-IPTLL 76 (112)
T ss_dssp CEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTCCSHHHHTTCCS-BSEEE
T ss_pred eEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCCc-ccEEE
Confidence 5678999999988 467999999999999999999999999999986 59999999999999999999997 99999
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+|++|+.+....|..+.+.|.+|+.+.+++.
T Consensus 77 ~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 77 VLKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 9999998766666678999999999998765
No 37
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.73 E-value=4.8e-18 Score=144.26 Aligned_cols=105 Identities=21% Similarity=0.332 Sum_probs=94.8
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+.++|.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.+|++|+|.+ +||+
T Consensus 5 ~v~~l~~~~~~~~~~--~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt~ 80 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIY--DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKTLFQRFSLKG-VPQI 80 (111)
T ss_dssp CSEECCHHHHHHHHT--TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCS-SCEE
T ss_pred cceecCHHHHHHHHH--hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChhHHHhcCCCc-CCEE
Confidence 477899999999985 3568999999999999999999999999999986 49999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++|++|+.+....|..+.+.|.+|+.+.+
T Consensus 81 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 81 LYFKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 99999998766666678899999998765
No 38
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.73 E-value=7.8e-18 Score=142.30 Aligned_cols=106 Identities=21% Similarity=0.459 Sum_probs=94.6
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
+.+..+|.++|+..+. +.+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.++++|+|.+ +||
T Consensus 2 ~~v~~l~~~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~-~Pt 77 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRG-IPT 77 (108)
T ss_dssp TTEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCTTHHHHTTCCS-SSE
T ss_pred CcceecchhhHHHHHH--hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCcc-cCE
Confidence 3578899999998775 4678999999999999999999999999999976 49999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+++|++|+.+....|..+.+.|.+|+.+.+
T Consensus 78 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 78 LLLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 999999998776666678899999998764
No 39
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.73 E-value=7.4e-18 Score=142.98 Aligned_cols=104 Identities=21% Similarity=0.384 Sum_probs=93.6
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCC--CEEEEEEEecCcHHHHHHhCCcCCC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQL 204 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~--~v~~~~Vd~~~~~~l~~~~~v~~~~ 204 (554)
..+..||.++|++.+. +++++|.||++||++|+.+.|.++++++.+... ++.++.||++.++.+|++|+|.+ +
T Consensus 5 ~~v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~-~ 79 (111)
T 3uvt_A 5 STVLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRG-Y 79 (111)
T ss_dssp CCSEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCS-S
T ss_pred CcceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCc-c
Confidence 4588999999999984 679999999999999999999999999987632 69999999999999999999997 9
Q ss_pred CcceeccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 205 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 205 Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
||+++|++|+.+..+.|..+.+.|.+|+.++
T Consensus 80 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 PTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 9999999999877766777999999999875
No 40
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.73 E-value=1.9e-18 Score=151.94 Aligned_cols=106 Identities=10% Similarity=0.093 Sum_probs=95.8
Q ss_pred cccccccccccccccCCCCCCcEEEEEEccc--ccccccchHHHHHHHHHhCCCC-EEEEEEEecCcHHHHHHhCCcCCC
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLG-VGFFTVHVHNEQGLARRLGVGSQL 204 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~w--C~~C~~l~p~~~~~a~~l~~~~-v~~~~Vd~~~~~~l~~~~~v~~~~ 204 (554)
....+|.++|++.|. +++++||.|||+| |++|+.++|.++++++++.+ . ++|++||.+++++++.+|||++ +
T Consensus 18 g~~~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g-~~v~~~KVdvDe~~~lA~~ygV~s-I 92 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD-YTWQVAIADLEQSEAIGDRFGAFR-F 92 (140)
T ss_dssp TCEECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT-SCCEEEECCHHHHHHHHHHHTCCS-S
T ss_pred CCccCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC-CeEEEEEEECCCCHHHHHHcCCcc-C
Confidence 345789999999993 6679999999999 99999999999999999976 5 9999999999999999999997 9
Q ss_pred CcceeccCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 205 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 205 Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
||+++|++|+.+....|..+.+.|.+++.+.+..
T Consensus 93 PTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 93 PATLVFTGGNYRGVLNGIHPWAELINLMRGLVEP 126 (140)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred CEEEEEECCEEEEEEecCCCHHHHHHHHHHHhcC
Confidence 9999999999998888888889999999887643
No 41
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.72 E-value=2.4e-18 Score=146.22 Aligned_cols=70 Identities=30% Similarity=0.505 Sum_probs=65.7
Q ss_pred CCCCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC----hhHHHHHHHHHHHHHHcCChHHHHhhhccCC
Q psy16770 16 AVSLDPYETLGVPRTA-SLQEIRKNYKRLVVEWHPDKNND----PTAQEKFLQLTEAYNILSDAERRKQYDLFGT 85 (554)
Q Consensus 16 ~~~~d~y~~Lgv~~~a-~~~~ik~ay~~l~~~~hPd~~~~----~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~ 85 (554)
....|||+||||+++| +.++||+|||+|+++||||++++ +.+.++|++|++||++|+||.+|+.||.+|.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4578999999999999 99999999999999999999976 5688999999999999999999999999875
No 42
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.72 E-value=2e-17 Score=139.37 Aligned_cols=104 Identities=18% Similarity=0.396 Sum_probs=93.7
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+.+++.++|+..+. +.+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.++++|+|.+ +||+
T Consensus 3 ~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~-~Pt~ 78 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVL--KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNPETPNAYQVRS-IPTL 78 (107)
T ss_dssp CEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCHHHHHTTCCS-SSEE
T ss_pred ceeecchhhhhHHHH--hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCHHHHHhcCCCc-cCEE
Confidence 578899999998774 4678999999999999999999999999999986 59999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
++|++|+.+....|..+.+.|.+|+.+.
T Consensus 79 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9999999877665667889999999875
No 43
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.71 E-value=1.3e-17 Score=140.68 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=78.0
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccC
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 212 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~ 212 (554)
|.++|++.+ +.+++++|.|||+||++|+.+.|.++++++.+. ++.++.||++.++.++++|+|.+ +||+++|++
T Consensus 7 ~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~ 80 (105)
T 4euy_A 7 TIEELATYI---EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFT-GPTVLLFYN 80 (105)
T ss_dssp ---CCSSST---TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CC-CCEEEEEET
T ss_pred CHHHHHHHH---hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCC-CCEEEEEeC
Confidence 567888888 467899999999999999999999999999984 59999999999999999999997 999999999
Q ss_pred CeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 213 GRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 213 g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
|+.+....|..+.+.|.+++.+.+
T Consensus 81 G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 81 GKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp TEEEEEEESSCCHHHHHHHHHTTC
T ss_pred CeEEEEEeCCcCHHHHHHHHHHhh
Confidence 998877767779999999998764
No 44
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.5e-17 Score=146.07 Aligned_cols=107 Identities=21% Similarity=0.341 Sum_probs=94.9
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhC----CCCEEEEEEEecCcHHHHHHhCCcC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS----PLGVGFFTVHVHNEQGLARRLGVGS 202 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~----~~~v~~~~Vd~~~~~~l~~~~~v~~ 202 (554)
..+..|+.++|++.+. ..+++++|.||++||++|+.+.|.|+++++.++ + ++.++.|||+.++.+|++|+|.+
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~ 83 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVL--DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG-KVKLAAVDATVNQVLASRYGIRG 83 (133)
T ss_dssp CSCEECCTTHHHHHTT--TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT-SEEEEEEETTTCCHHHHHHTCCS
T ss_pred CcCEEcCHhhHHHHHh--cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC-cEEEEEEECCCCHHHHHhCCCCe
Confidence 3578899999999875 356899999999999999999999999999986 4 59999999999999999999997
Q ss_pred CCCcceeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 203 QLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 203 ~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+||+++|.+|+.+..+.|.++.+.|.+|+.+.+.
T Consensus 84 -~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 84 -FPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp -SSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred -eCeEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 9999999889876666666789999999987753
No 45
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.71 E-value=2.4e-17 Score=138.62 Aligned_cols=103 Identities=17% Similarity=0.299 Sum_probs=93.3
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+.++|.++|++.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++.++++|+|.+ +||+
T Consensus 4 ~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~ 77 (106)
T 3die_A 4 AIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMS-IPTL 77 (106)
T ss_dssp CCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-BSEE
T ss_pred ceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcc-cCEE
Confidence 46788999999988 5679999999999999999999999999999864 9999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+++++|+.+....|..+.++|.+++.+.+
T Consensus 78 ~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 78 IVFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 99999998776667778899999998753
No 46
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.70 E-value=2.2e-17 Score=142.70 Aligned_cols=107 Identities=16% Similarity=0.257 Sum_probs=95.1
Q ss_pred cccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCC
Q psy16770 126 LFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLP 205 (554)
Q Consensus 126 ~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~P 205 (554)
+..+..+|.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.+..++++|+|.+ +|
T Consensus 12 ~~~~~~~~~~~f~~~v~--~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~-~P 87 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVV--NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHTDLAIEYEVSA-VP 87 (119)
T ss_dssp CSEEECCSHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTHHHHHHTTCCS-SS
T ss_pred ceEEEecChhhHHHHHH--cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCc-cc
Confidence 34688899999999886 3577999999999999999999999999999976 59999999999999999999997 99
Q ss_pred cceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 206 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 206 ti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
|+++|++|+.+....|..+.+.|.+|+.+.+
T Consensus 88 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9999999998766656668899999998764
No 47
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=5.4e-18 Score=138.57 Aligned_cols=63 Identities=32% Similarity=0.467 Sum_probs=60.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHh
Q psy16770 17 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 79 (554)
Q Consensus 17 ~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~ 79 (554)
...|||+||||+++++.++||+|||+|+++||||+++++++.++|++|++||++|+|+.+|+.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 458999999999999999999999999999999999988999999999999999999998865
No 48
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.70 E-value=1.6e-17 Score=142.97 Aligned_cols=104 Identities=19% Similarity=0.270 Sum_probs=91.8
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.....|.++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+.+ +.|+.||+++++.++++|+|.+ +||+
T Consensus 13 ~~~~~t~~~f~~~l~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~-~Pt~ 88 (116)
T 3qfa_C 13 VKQIESKTAFQEALDA-AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKS-MPTF 88 (116)
T ss_dssp CBCCCCHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCS-SSEE
T ss_pred ccCCCCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCcc-ccEE
Confidence 3556788999998742 1678999999999999999999999999999875 8999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++|++|+.+....|. +.+.|.+++.+.+
T Consensus 89 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999999987777676 8899999998764
No 49
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.70 E-value=2e-17 Score=139.64 Aligned_cols=104 Identities=20% Similarity=0.314 Sum_probs=94.5
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+..+|.++|+..+. .+++++|.||++||++|+.+.|.++++++.+.+ .+.++.||++.++.++++|+|.+ +||+
T Consensus 5 ~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~-~Pt~ 79 (109)
T 3tco_A 5 VTLVLTEENFDEVIR---NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLN-IPTT 79 (109)
T ss_dssp CCEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred eEEEecHHHHHHHHh---cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCccc-CCEE
Confidence 477899999999883 578999999999999999999999999999986 49999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++|++|+.+....|..+.+.|.+++.+.+
T Consensus 80 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 80 LIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 99999998776667678899999998765
No 50
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.70 E-value=3.7e-17 Score=139.54 Aligned_cols=107 Identities=18% Similarity=0.369 Sum_probs=95.4
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..+.+++.++|+..+. ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.+|++|+|.+ +||
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~-~Pt 82 (115)
T 1thx_A 7 KGVITITDAEFESEVL--KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPNPTTVKKYKVEG-VPA 82 (115)
T ss_dssp CSEEECCGGGHHHHTT--TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTCHHHHHHTTCCS-SSE
T ss_pred CceEEeeccchhhHhh--cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCCHHHHHHcCCCc-eeE
Confidence 3578899999998875 4678999999999999999999999999999986 49999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+++|++|+.+....|..+.+.|.+|+.+.++
T Consensus 83 ~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 83 LRLVKGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEcCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 9999999987765566788999999988764
No 51
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=1.9e-17 Score=146.98 Aligned_cols=108 Identities=20% Similarity=0.318 Sum_probs=95.5
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCC--CEEEEEEEecCcHHHHHHhCCcCCC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQL 204 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~--~v~~~~Vd~~~~~~l~~~~~v~~~~ 204 (554)
..+..|+.++|+..+. .+++++|+||++||++|+.+.|.|+++++.+.+. ++.++.|||+.+..+|++|+|.+ +
T Consensus 17 ~~v~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~ 92 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSG-Y 92 (140)
T ss_dssp TTEEECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCS-S
T ss_pred CCCEEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCc-c
Confidence 4578899999999883 5789999999999999999999999999998753 39999999999999999999997 9
Q ss_pred CcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 205 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 205 Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
||+++|++|+...+. |.++.+.|.+|+.+.+.++
T Consensus 93 Pt~~~~~~G~~~~~~-g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 93 PTIKILKKGQAVDYD-GSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp SEEEEEETTEEEECC-SCCCHHHHHHHHHHHHSSS
T ss_pred CeEEEEECCcEEEcC-CCCCHHHHHHHHHHhcCCC
Confidence 999999999955444 5568899999999988765
No 52
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.70 E-value=2.9e-17 Score=139.81 Aligned_cols=106 Identities=19% Similarity=0.365 Sum_probs=94.0
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+..+|.++|++.+. +.+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.++++|+|.+ +||+
T Consensus 6 ~v~~l~~~~~~~~~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~-~Pt~ 81 (112)
T 1t00_A 6 TLKHVTDDSFEQDVL--KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDENPGTAAKYGVMS-IPTL 81 (112)
T ss_dssp CCEEECTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred eEEecchhhHHHHHh--hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCCHHHHHhCCCCc-ccEE
Confidence 367899999988776 4578999999999999999999999999999976 49999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+++++|+.+....|..+.+.|.+++.+.++
T Consensus 82 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 999999987666666788999999987653
No 53
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.70 E-value=2.6e-17 Score=138.27 Aligned_cols=103 Identities=18% Similarity=0.355 Sum_probs=90.8
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
+++||.++|+..+ ..+++++|.||++||++|+.+.|.++++++.+.+ .+.++.||++.++.++++|+|.+ +||++
T Consensus 2 v~~l~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQAI---QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDENPETTSQFGIMS-IPTLI 76 (105)
T ss_dssp CEEECTTTHHHHH---SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred ceeccHHhHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCCHHHHHHcCCcc-ccEEE
Confidence 5678999999665 4568999999999999999999999999999976 49999999999999999999997 99999
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++++|+.+....|..+.+.|.+++.+.+
T Consensus 77 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 9999998766656678899999887654
No 54
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.70 E-value=4e-17 Score=137.65 Aligned_cols=104 Identities=16% Similarity=0.351 Sum_probs=92.8
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
+..+|.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.++++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 78 (107)
T 1dby_A 3 AGAVNDDTFKNVVL--ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESPNVASEYGIRS-IPTIM 78 (107)
T ss_dssp CEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHHTCCS-SCEEE
T ss_pred cEeccHHHHHHHHh--cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCHHHHHHCCCCc-CCEEE
Confidence 56789999998775 3578999999999999999999999999999976 49999999999999999999997 99999
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++++|+.+....|..+.+.+.+++.+.+
T Consensus 79 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999998766656678899999998765
No 55
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=4.1e-17 Score=142.92 Aligned_cols=105 Identities=23% Similarity=0.360 Sum_probs=91.5
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+..||.++|+..+. ..+++++|.||++||++|+.+.|.++++++.+++. +.++.||++.+..+|++|+|.+ +||+
T Consensus 18 ~v~~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~-~Pt~ 93 (130)
T 2dml_A 18 DVIELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADKHQSLGGQYGVQG-FPTI 93 (130)
T ss_dssp SSEECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHHTCCS-SSEE
T ss_pred CcEECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCCCHHHHHHcCCCc-cCEE
Confidence 578899999999775 45789999999999999999999999999999863 9999999999999999999997 9999
Q ss_pred eeccCCeE-EEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRT-SFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~-~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++|.+|.. ...+.|.++.+.|.+|+.+.+
T Consensus 94 ~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 94 KIFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp EEESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 99977653 444445568899999998765
No 56
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.69 E-value=3.7e-17 Score=163.55 Aligned_cols=111 Identities=21% Similarity=0.339 Sum_probs=99.2
Q ss_pred cccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCC
Q psy16770 126 LFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLP 205 (554)
Q Consensus 126 ~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~P 205 (554)
...++++|.++|++.+ ..+.+++++|.||++||++|+.+.|.|+++++++.+ ++.|++|||+.++.+|++|+|.+ +|
T Consensus 6 ~~~v~~~~~~~f~~~~-~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~-~P 82 (287)
T 3qou_A 6 VENIVNINESNLQQVL-EQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRA-IP 82 (287)
T ss_dssp CTTEEECCTTTHHHHH-TTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHHHHHTTTCCS-SS
T ss_pred CCccEECCHHHHHHHH-HhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHHHHHHcCCCC-CC
Confidence 4468899999999966 334588999999999999999999999999999986 49999999999999999999998 99
Q ss_pred cceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 206 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 206 ti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
|+++|++|+.+....|..+.+.+.+|+...+|..
T Consensus 83 t~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp~~ 116 (287)
T 3qou_A 83 TVYLFQNGQPVDGFQGPQPEEAIRALLDXVLPRE 116 (287)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCH
T ss_pred eEEEEECCEEEEEeeCCCCHHHHHHHHHHHcCCc
Confidence 9999999998876667678899999999998654
No 57
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.69 E-value=2.2e-17 Score=147.01 Aligned_cols=108 Identities=18% Similarity=0.293 Sum_probs=96.5
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..+.+||.++|.+.+. ..+++++|.||++||++|+.+.|.|+++++.+.+ .+.++.||++.++.+|++|+|.+ +||
T Consensus 6 ~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt 81 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVE--DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATNPWTAEKYGVQG-TPT 81 (140)
T ss_dssp TTEEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTCHHHHHHHTCCE-ESE
T ss_pred cceEEcchHhHHHHHH--hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcCHhHHHHCCCCc-CCE
Confidence 3578899999996665 4578999999999999999999999999999987 49999999999999999999998 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
+++|++|+.+....|..+.+.|.+|+.+.++.
T Consensus 82 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 82 FKFFCHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEEEETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 99999999876666667889999999988753
No 58
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.69 E-value=2.1e-17 Score=144.87 Aligned_cols=106 Identities=20% Similarity=0.425 Sum_probs=94.4
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..+.+||.++|++.+. +.+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.+++++++|+|.+ +||
T Consensus 22 ~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt 97 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRG-IPT 97 (128)
T ss_dssp CCSEEECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTCCTTSGGGTCCS-SSE
T ss_pred cccEecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCc-cCE
Confidence 3478899999998775 4678999999999999999999999999999976 49999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+++|++|+.+....|..+.+.|.+|+.+.+
T Consensus 98 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 98 LLLFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 999999998766656678899999998754
No 59
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.69 E-value=3.2e-17 Score=138.32 Aligned_cols=106 Identities=21% Similarity=0.371 Sum_probs=93.2
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
++.+||.++|+..+ +.+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.++++|+|.+ +||+
T Consensus 2 ~v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~-~Pt~ 76 (109)
T 2yzu_A 2 KPIEVTDQNFDETL---GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENPKTAMRYRVMS-IPTV 76 (109)
T ss_dssp CCEECCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred cceEccHhHHHHHh---cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCHhHHHhCCCCc-CCEE
Confidence 46789999999666 4578999999999999999999999999999986 49999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
++|++|+.+....|..+.+.|.+|+.+.++.
T Consensus 77 ~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 77 ILFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EEEeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 9999999876555666889999999988764
No 60
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.69 E-value=1.4e-17 Score=143.17 Aligned_cols=109 Identities=22% Similarity=0.378 Sum_probs=95.4
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCC--CCEEEEEEEecCcHHHHHHhCCcCCC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVHNEQGLARRLGVGSQL 204 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~--~~v~~~~Vd~~~~~~l~~~~~v~~~~ 204 (554)
..+.++|.++|+..+ ..+++++|.||++||++|+.+.|.++++++.+++ ..+.++.||++.++.+|++|+|.+ +
T Consensus 7 ~~v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~ 82 (120)
T 1mek_A 7 DHVLVLRKSNFAEAL---AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG-Y 82 (120)
T ss_dssp TTEEECCTTTHHHHH---HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS-S
T ss_pred CCcEEechhhHHHHH---ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCc-c
Confidence 357889999999887 3578999999999999999999999999999874 358999999999999999999997 9
Q ss_pred CcceeccCCeEE--EEeCCcccHHHHHHHHHHhCCCC
Q psy16770 205 PQIALLTDGRTS--FFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 205 Pti~~~~~g~~~--~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
||+++|++|+.+ ..+.|..+.+.|.+|+.+.++++
T Consensus 83 Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 83 PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp SEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred cEEEEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 999999999764 44445668899999999988765
No 61
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.69 E-value=3.4e-17 Score=148.58 Aligned_cols=106 Identities=21% Similarity=0.332 Sum_probs=95.4
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+++++.++|++.+ ..+++++|.||++||++|+.+.|.|+++++.+.+ ++.|++||+++++.++++|+|++ +||+
T Consensus 48 ~~~~l~~~~f~~~~---~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~~l~~~~~i~~-~Pt~ 122 (155)
T 2ppt_A 48 KVAGIDPAILARAE---RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHPAVAGRHRIQG-IPAF 122 (155)
T ss_dssp SEEECCHHHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTSTHHHHHTTCCS-SSEE
T ss_pred CCccCCHHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccHHHHHHcCCCc-CCEE
Confidence 46788999999988 4678999999999999999999999999999987 49999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
++|++|+.+....|..+.+.|.+|+.+.++.
T Consensus 123 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 123 ILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 9999999877666667889999999987654
No 62
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.68 E-value=7.8e-17 Score=135.17 Aligned_cols=104 Identities=14% Similarity=0.376 Sum_probs=92.1
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
+..+|.++|+..+. ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.+|++++|.+ +||++
T Consensus 2 v~~~~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 77 (105)
T 1fb6_A 2 VQDVNDSSWKEFVL--ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAPGIATQYNIRS-IPTVL 77 (105)
T ss_dssp CEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred ceechhhhHHHHHh--cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchHHHHHhCCCCc-ccEEE
Confidence 46788999999775 3578999999999999999999999999999976 49999999999999999999997 99999
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++++|+......|..+.+.+.+++.+.+
T Consensus 78 ~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 78 FFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 9999998776656668899999998753
No 63
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.68 E-value=6.1e-17 Score=145.45 Aligned_cols=106 Identities=23% Similarity=0.393 Sum_probs=97.1
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..+..++.++|+..+ ..+++++|+||++||++|+.+.|.|+++++.+.+ ++.++.||++.++.++++|+|.+ +||
T Consensus 38 ~~v~~l~~~~~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~-~Pt 112 (148)
T 3p2a_A 38 GEVINATAETLDKLL---QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPALSTRFRIRS-IPT 112 (148)
T ss_dssp CCCEECCTTTHHHHT---TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred CCceecCHHHHHHHH---hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHHHHHHCCCCc-cCE
Confidence 458889999999988 4678999999999999999999999999999976 49999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+++|++|+.+..+.|..+.+.|.+|+.+.+.
T Consensus 113 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 113 IMLYRNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EEEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EEEEECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 9999999988877777899999999998764
No 64
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.68 E-value=6.5e-17 Score=143.19 Aligned_cols=109 Identities=24% Similarity=0.426 Sum_probs=95.7
Q ss_pred cccccccccccccccCCC---------CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHh
Q psy16770 128 HKLSTTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRL 198 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~---------~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~ 198 (554)
.++.||.++|++.|...+ .+++++|.||++||++|+.+.|.++++++.+++ ++.++.||++.++.+|++|
T Consensus 10 ~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~ 88 (136)
T 2l5l_A 10 KVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGAF 88 (136)
T ss_dssp SEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHT
T ss_pred ceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHc
Confidence 578899999999886421 468999999999999999999999999999976 4999999999999999999
Q ss_pred CCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 199 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 199 ~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+|.+ +||+++| ++|+.+.+.|+ .+.+.|.+|+.+.++..
T Consensus 89 ~v~~-~Pt~~~~~~~G~~~~~~G~-~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 89 GIRS-IPSILFIPMEGKPEMAQGA-MPKASFKKAIDEFLLKK 128 (136)
T ss_dssp TCCS-SCEEEEECSSSCCEEEESC-CCHHHHHHHHHHHHTSC
T ss_pred CCCC-CCEEEEECCCCcEEEEeCC-CCHHHHHHHHHHHhhcc
Confidence 9997 9999999 89988866655 58899999999886544
No 65
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.68 E-value=5.1e-17 Score=140.24 Aligned_cols=108 Identities=20% Similarity=0.365 Sum_probs=95.2
Q ss_pred cccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCC
Q psy16770 126 LFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLP 205 (554)
Q Consensus 126 ~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~P 205 (554)
...+..++.++|...+. ..+++++|.||++||++|+.+.|.++++++.+++ ++.++.||++.++.+|++++|.+ +|
T Consensus 11 ~~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~-~P 86 (121)
T 2i1u_A 11 KSATIKVTDASFATDVL--SSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPETARNFQVVS-IP 86 (121)
T ss_dssp -CCSEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCS-SS
T ss_pred cccceecCHHHHHHHHH--hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhcCCCc-CC
Confidence 34578899999998775 4578999999999999999999999999999976 49999999999999999999997 99
Q ss_pred cceeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 206 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 206 ti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
|++++++|+.+....|..+.+.|.+++.+.++
T Consensus 87 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 87 TLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred EEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 99999999987666666788999999987765
No 66
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.68 E-value=3.9e-17 Score=136.44 Aligned_cols=103 Identities=22% Similarity=0.411 Sum_probs=92.0
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
+.+||.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.++.++++++|.+ +||++
T Consensus 1 V~~l~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 74 (104)
T 2e0q_A 1 VIHLDSKNFDSFL---ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENPDIAARYGVMS-LPTVI 74 (104)
T ss_dssp CEECCTTTHHHHH---HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SCEEE
T ss_pred CeecCHHHHHHHH---hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCHHHHHhCCccc-cCEEE
Confidence 4578999999988 3578999999999999999999999999999875 8999999999999999999997 99999
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+|++|+.+....|..+.+.+.+|+.+.++
T Consensus 75 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 75 FFKDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 99999987665566688999999988754
No 67
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.68 E-value=1.5e-15 Score=146.58 Aligned_cols=207 Identities=13% Similarity=0.162 Sum_probs=148.8
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhh-ccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEE
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 319 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvf 319 (554)
+.+.|.+++++|+.. +..++|.+|.+..++....+..++ .+ +++.||.+ .+++++++|+++ .|+|++|
T Consensus 12 ~~l~s~~~~~~~l~~---~~v~vVgff~~~~~~~~~~f~~~A~~l-~~~~F~~t-----~~~~v~~~~~v~--~p~i~lf 80 (227)
T 4f9z_D 12 TWLTDVPAAMEFIAA---TEVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIS-----TDSEVLTHYNIT--GNTICLF 80 (227)
T ss_dssp EECCSHHHHHHHHHT---SSEEEEEECSCSCSTHHHHHHHHTTTC-TTSEEEEE-----CCHHHHHHTTCC--SSEEEEE
T ss_pred eeeCCHHHHHHHHhc---CCeEEEEEecCCCchhHHHHHHHHHhC-CCceEEEE-----CCHHHHHHcCCC--CCeEEEE
Confidence 455577899999853 344555566665666666666666 45 68999998 688999999997 4999999
Q ss_pred eCCCCCCCceeec----CCCChhHHHhHHhcCCCcccccccchhhhhhcCCCCceEEEEEcC-CCCcchhHHHHHHHHHh
Q psy16770 320 KEDKDRPSASITM----NSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQ 394 (554)
Q Consensus 320 k~~~~~~~~~i~~----~~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~c~~~~lcvvl~~~-~~~~~~~~~~~l~~~a~ 394 (554)
++..+++. .+. ++++...|.+||+.+..|+++++|.++.....-...++++++|.. ...++++..+.++++|+
T Consensus 81 k~~~~~~~--~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk 158 (227)
T 4f9z_D 81 RLVDNEQL--NLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAK 158 (227)
T ss_dssp ETTTTEEE--EECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHH
T ss_pred EecCcccc--cccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHH
Confidence 97554432 344 478899999999999999999999877533221112466666754 44566788899999999
Q ss_pred hccCCCCceEEEEEecc--cchHHHHhhCCCCCCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHH
Q psy16770 395 ESRFVHNNIAFMYVFIE--KQPEFVNALTSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGL 471 (554)
Q Consensus 395 ~~~~~~~~v~F~~vd~~--~q~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl 471 (554)
+ ++++ +.|+|+|++ .....++.| |... .++|.+.+.+..+ .+|.+..+ ++|.++|.+|+
T Consensus 159 ~--~k~~-i~F~~vd~~~~~~~~~l~~f----gl~~--~~~P~~~i~~~~~~~ky~~~~~---------~~t~~~i~~Fv 220 (227)
T 4f9z_D 159 L--FQGK-ILFILVDSGMKENGKVISFF----KLKE--SQLPALAIYQTLDDEWDTLPTA---------EVSVEHVQNFC 220 (227)
T ss_dssp H--TTTT-CEEEEEETTSGGGHHHHHHT----TCCG--GGCSEEEEEESSSCCEEEETTC---------CCCHHHHHHHH
T ss_pred H--hhCC-EEEEEeCCccHhHHHHHHHc----CCCc--ccCCEEEEEECCCCccccCCcC---------CCCHHHHHHHH
Confidence 9 9865 999999996 355677777 2111 2555554445444 56755333 47999999999
Q ss_pred HhhhcCC
Q psy16770 472 RSLVNDP 478 (554)
Q Consensus 472 ~~~~~g~ 478 (554)
++++.|+
T Consensus 221 ~~~~~Gk 227 (227)
T 4f9z_D 221 DGFLSGK 227 (227)
T ss_dssp HHHHTTC
T ss_pred HHHhCCC
Confidence 9999996
No 68
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.68 E-value=5.2e-17 Score=138.35 Aligned_cols=106 Identities=11% Similarity=0.238 Sum_probs=88.6
Q ss_pred cccccc-ccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~Lt~-~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..|+. ++|++.+..+..+++++|.||++||++|+.+.|.++++++.++..++.++.||++.++.++++|+|.+ +||+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISA-VPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCc-ccEE
Confidence 456776 89998885324578999999999999999999999999998643369999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++|++|+.+....|. ..++|.+++.+.+
T Consensus 81 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 81 IIIHKGTILKELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEETTEEEEEECSC-CHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCC-CHHHHHHHHHHHH
Confidence 999999988777676 4467999998764
No 69
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.68 E-value=6.4e-17 Score=148.75 Aligned_cols=118 Identities=17% Similarity=0.188 Sum_probs=96.8
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEc-------ccccccccchHHHHHHHHHhC-----CCCEEEEEEEecCcHHH
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYS-------DWCFACLQVEPIFKKLMDELS-----PLGVGFFTVHVHNEQGL 194 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya-------~wC~~C~~l~p~~~~~a~~l~-----~~~v~~~~Vd~~~~~~l 194 (554)
..+++||.++|++.|. .+.+.++||.||| +||++|+.+.|+|+++|+++. + ++.|++||+++++++
T Consensus 18 ~~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~-~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 18 TGVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS-LNLFFTVDVNEVPQL 95 (178)
T ss_dssp TSEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEEETTTCHHH
T ss_pred CCCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC-CEEEEEEECccCHHH
Confidence 4688999999999874 2346689999999 499999999999999999986 5 599999999999999
Q ss_pred HHHhCCcCCCCcceeccCCeE-------------EEE---eCCcccHHHHHHHHHHhCCCCccccCCccc
Q psy16770 195 ARRLGVGSQLPQIALLTDGRT-------------SFF---KEPSFSVQKMVEFFRLKLPYKLIVPLSATN 248 (554)
Q Consensus 195 ~~~~~v~~~~Pti~~~~~g~~-------------~~y---~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~ 248 (554)
+++|||++ +||+++|++|.. ..| .++.++++.|.+||.+.++.. +.+...-+
T Consensus 96 a~~~~I~s-iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~-i~I~rp~n 163 (178)
T 3ga4_A 96 VKDLKLQN-VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNIS-ITVPQAFN 163 (178)
T ss_dssp HHHTTCCS-SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCC-CCCCCSCC
T ss_pred HHHcCCCC-CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCC-ccccCCCC
Confidence 99999997 999999988742 233 232468999999999998866 33333334
No 70
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.68 E-value=8.9e-17 Score=136.57 Aligned_cols=101 Identities=16% Similarity=0.365 Sum_probs=89.4
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
....|.++|+..+ ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.++.++++|+|.+ +||++
T Consensus 9 ~~~~~~~~f~~~~---~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 82 (109)
T 3f3q_A 9 TQFKTASEFDSAI---AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDELGDVAQKNEVSA-MPTLL 82 (109)
T ss_dssp EECCSHHHHHHHT---TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred cCCCCHHHHHHHH---hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCCc-cCEEE
Confidence 4456788999888 4588999999999999999999999999999864 8999999999999999999997 99999
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+|++|+.+....|. +.+.|.+++.+.+
T Consensus 83 ~~~~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 83 LFKNGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEECCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 99999987776676 6699999998753
No 71
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=4.5e-17 Score=141.96 Aligned_cols=106 Identities=23% Similarity=0.331 Sum_probs=91.9
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..+++||.++|++.+. . .++|.||++||++|+.+.|.++++++.+.+.++.++.||+++++.+|++|+|.+ +||
T Consensus 7 ~~v~~l~~~~f~~~~~---~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~Pt 80 (126)
T 1x5e_A 7 GNVRVITDENWRELLE---G--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINA-LPT 80 (126)
T ss_dssp CSEEECCTTTHHHHTS---S--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred CccEEecHHHHHHHhC---C--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcc-cCE
Confidence 3578899999998762 2 399999999999999999999999999875469999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+++|++|+...+. |..+.+.|.+|+.+.+...
T Consensus 81 ~~~~~~G~~~~~~-G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 81 IYHCKDGEFRRYQ-GPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp EEEEETTEEEECC-SCCCHHHHHHHHHTCGGGG
T ss_pred EEEEeCCeEEEee-cCCCHHHHHHHHHHHhhcc
Confidence 9999999965444 5568899999999886544
No 72
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.68 E-value=1.8e-17 Score=147.41 Aligned_cols=105 Identities=9% Similarity=0.148 Sum_probs=88.3
Q ss_pred ccccc-cccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~Lt-~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..|+ .++|++.|.. .++++++|.|||+||++|+.+.|.++++|+++.+ .+.|++||++++++++++|+|.+ .||+
T Consensus 23 v~~l~t~~~f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~~e~a~~y~V~s-iPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEVPDFNTMYELYD-PVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTTTTCCS-SEEE
T ss_pred hhccCCHHHHHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCCHHHHHHcCCCC-CCEE
Confidence 33444 5899988853 2578999999999999999999999999999976 49999999999999999999997 9999
Q ss_pred eeccCCeEE--E-------EeCCccc-HHHHHHHHHHhC
Q psy16770 208 ALLTDGRTS--F-------FKEPSFS-VQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~--~-------y~~g~~~-~~~i~~fl~~~~ 236 (554)
++|++|+.+ . ...|... .+.|.++++..+
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999999987 3 3444444 788888887654
No 73
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.68 E-value=1.2e-16 Score=142.15 Aligned_cols=108 Identities=26% Similarity=0.461 Sum_probs=94.0
Q ss_pred ccccccccccccccccCCC---------CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHH
Q psy16770 127 FHKLSTTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARR 197 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~---------~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~ 197 (554)
..+..||..+|+..|...+ .+++++|.||++||++|+.+.|.++++++.+.+ .+.++.||++.++.+|++
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~ 100 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELARD 100 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHH
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHHH
Confidence 4578899999998886432 478999999999999999999999999999986 499999999999999999
Q ss_pred hCCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 198 LGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 198 ~~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
|+|.+ +||+++| .+|+...+.| ..+.+.|.+|+.+.+.
T Consensus 101 ~~v~~-~Pt~~~~~~~g~~~~~~G-~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 101 FGIQS-IPTIWFVPMKGEPQVNMG-ALSKEQLKGYIDKVLL 139 (141)
T ss_dssp TTCCS-SSEEEEECSSSCCEEEES-CCCHHHHHHHHHHTTC
T ss_pred cCCCC-cCEEEEEeCCCCEEEEeC-CCCHHHHHHHHHHHHc
Confidence 99997 9999999 6777776664 4588999999988764
No 74
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.67 E-value=5.4e-18 Score=171.26 Aligned_cols=70 Identities=37% Similarity=0.641 Sum_probs=0.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCCC
Q psy16770 17 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 86 (554)
Q Consensus 17 ~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~ 86 (554)
...|||++|||+++|+.+|||+|||+||++||||+++++.|+++|++|++||++|+||.+|+.||.++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 3579999999999999999999999999999999998888999999999999999999999999998543
No 75
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=9.9e-18 Score=148.63 Aligned_cols=105 Identities=16% Similarity=0.281 Sum_probs=90.7
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCc-----
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG----- 201 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~----- 201 (554)
..+..+|.++|++.+. .+.+++++|.|||+||++|+.+.|.|+++++.+++.++.++.||+++++.+|++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 4588899999999884 2345599999999999999999999999999998646999999999999999999998
Q ss_pred -CCCCcceeccCCeEEEEeCCcccHHHHHHHHH
Q psy16770 202 -SQLPQIALLTDGRTSFFKEPSFSVQKMVEFFR 233 (554)
Q Consensus 202 -~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~ 233 (554)
+ +||+++|++|+.+....|..+.+.|.+|+.
T Consensus 86 ~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 86 KQ-LPTLILFQGGKEAMRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp SC-SSEEEEESSSSEEEEESCBCSSSCBCCCCC
T ss_pred CC-CCEEEEEECCEEEEEecCcCchHHHHHHHh
Confidence 8 999999999998877777767666655553
No 76
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.67 E-value=7.6e-18 Score=143.05 Aligned_cols=67 Identities=31% Similarity=0.446 Sum_probs=62.1
Q ss_pred CCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 18 SLDPYETLGVPRTASL--QEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 18 ~~d~y~~Lgv~~~a~~--~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
..|+|+||||+++++. ++||+|||+|++++|||++++ .++|++|++||++|+||.+|+.||.+|..+
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~~w 75 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGFW 75 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccccc
Confidence 3689999999999999 999999999999999999865 479999999999999999999999988654
No 77
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.66 E-value=3.8e-17 Score=142.23 Aligned_cols=105 Identities=21% Similarity=0.478 Sum_probs=88.3
Q ss_pred cccccccccccccccCCCCCCcEEEEEEccccc--------------ccccchHHHHHHHHHhCCCCEEEEEEEecCcHH
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCF--------------ACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG 193 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~--------------~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~ 193 (554)
.+.+|+.++|++.+. +.+++++|.||++||+ +|+.+.|.++++++.+.+ ++.+++||++.++.
T Consensus 4 ~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPG 80 (123)
T ss_dssp SCEECCSTTHHHHTT--SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTT
T ss_pred ccEecChhhHHHHHH--hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCCHH
Confidence 578899999997775 4678999999999999 999999999999998876 49999999999999
Q ss_pred HHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 194 LARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 194 l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++++|+|++ +||+++|++|+.+....|.++.++|.+|+.+.+
T Consensus 81 l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 81 TAPKYGIRG-IPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TGGGGTCCB-SSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHcCCCc-cCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 999999998 999999999998766666678899999998764
No 78
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=5e-17 Score=142.95 Aligned_cols=110 Identities=17% Similarity=0.269 Sum_probs=96.0
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCC-CCEEEEEEEecCcHHHHHHhCCcCCCC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNEQGLARRLGVGSQLP 205 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~-~~v~~~~Vd~~~~~~l~~~~~v~~~~P 205 (554)
..+..|+.++|+..+. ..+++++|+||++||++|+.+.|.|+++++.+++ ..+.++.|||+.+..++++|+|.+ +|
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~-~P 83 (133)
T 2dj3_A 7 GPVKVVVGKTFDAIVM--DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEG-FP 83 (133)
T ss_dssp CSSEECCTTTCCCCCT--CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSS-SS
T ss_pred CceEEEcCCCHHHHhc--cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCc-CC
Confidence 4588899999999885 3478999999999999999999999999999974 259999999999999999999997 99
Q ss_pred cceeccCCeE---EEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 206 QIALLTDGRT---SFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 206 ti~~~~~g~~---~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
|+++|.+|.. +.+.||.++.+.|.+|+.+.++..
T Consensus 84 t~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 84 TIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp EEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 9999987643 456667678899999999998755
No 79
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.66 E-value=4.9e-17 Score=147.23 Aligned_cols=71 Identities=28% Similarity=0.628 Sum_probs=64.6
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChh-------HHHHHHHHHHHHHHcCChHHHHhhhccCC
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT-------AQEKFLQLTEAYNILSDAERRKQYDLFGT 85 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~-------~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~ 85 (554)
.....|||+||||+++++.++||+|||+|++++||||++.+. +.++|++|++||++|+||.+|+.||..+.
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 455789999999999999999999999999999999987542 67899999999999999999999998664
No 80
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.66 E-value=2.4e-16 Score=137.95 Aligned_cols=88 Identities=24% Similarity=0.428 Sum_probs=81.6
Q ss_pred CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCccc
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFS 224 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~ 224 (554)
..+++++|.||++||++|+++.|.++++++.+++ ++.++.||++.++.++++|+|.+ +||++++++|+.+....|..+
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~ 117 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKNESLARKFSVKS-LPTIILLKNKTMLARKDHFVS 117 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGCHHHHHHTTCCS-SSEEEEEETTEEEEEESSCCC
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCC-cCEEEEEECCEEEEEecCCCC
Confidence 4678999999999999999999999999999975 59999999999999999999997 999999999998888778789
Q ss_pred HHHHHHHHHH
Q psy16770 225 VQKMVEFFRL 234 (554)
Q Consensus 225 ~~~i~~fl~~ 234 (554)
.++|.+|+++
T Consensus 118 ~~~l~~~l~~ 127 (128)
T 3ul3_B 118 SNDLIALIKK 127 (128)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 81
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.65 E-value=2.2e-16 Score=134.22 Aligned_cols=103 Identities=17% Similarity=0.319 Sum_probs=90.7
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec-CcHHHHHHhCCcCCCCc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~-~~~~l~~~~~v~~~~Pt 206 (554)
.+..||.++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++ .+..++++|+|.+ +||
T Consensus 6 ~v~~l~~~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~~~~~~~~v~~-~Pt 81 (111)
T 2pu9_C 6 KVTEVNKDTFWPIVKA-AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQENKTLAKELGIRV-VPT 81 (111)
T ss_dssp SEEEECTTTHHHHHTT-CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSTTHHHHHHHCCSB-SSE
T ss_pred ccEEechHHHHHHHHh-cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCcchHHHHHHcCCCe-eeE
Confidence 5788999999998853 247899999999999999999999999999987 4899999998 7899999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
++++++|+.+....|. +.++|.+++.+.
T Consensus 82 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 82 FKILKENSVVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp EEEESSSSEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCC-CHHHHHHHHHHh
Confidence 9999999987766666 478999999765
No 82
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.65 E-value=1.2e-16 Score=139.51 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=91.1
Q ss_pred cccccc-ccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~Lt~-~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..|+. ++|++.+ +.+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++++|++|+|.+ +||+
T Consensus 21 v~~l~~~~~f~~~~---~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~-~Pt~ 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIM---SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQ-LPTF 94 (125)
T ss_dssp CEEECCHHHHHHHH---HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred eEECCCHHHHHHHH---ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCc-ccEE
Confidence 677888 9999988 467899999999999999999999999999984 59999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
++|++|+.+....| .+.+.|.+++.+.++
T Consensus 95 ~i~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 95 IIARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEEeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99999998776666 477999999987653
No 83
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.65 E-value=2.4e-16 Score=132.38 Aligned_cols=104 Identities=13% Similarity=0.316 Sum_probs=89.9
Q ss_pred cccccc-ccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~Lt~-~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+.+|+. ++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+++ ++.++.||++.++.++++++|.+ +||+
T Consensus 2 v~~l~~~~~~~~~l~~-~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~-~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTK-ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDECEDIAMEYNISS-MPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHH-HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred ceecCCHHHHHHHHHh-cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccchHHHHHHcCCCc-ccEE
Confidence 346676 888888742 2578999999999999999999999999999875 59999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+++++|+.+....| .+.+.|.+++.+.+
T Consensus 79 ~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 79 VFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred EEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 99999998776666 47799999998753
No 84
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.65 E-value=1.6e-16 Score=143.75 Aligned_cols=121 Identities=12% Similarity=0.192 Sum_probs=95.0
Q ss_pred cccccc-cccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~Lt-~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
.+..++ .++|+..+.. ..+++++|.||++||++|+.+.|.++++++.+. ++.|+.||+++++.+|++|+|.+ +||
T Consensus 13 ~v~~l~~~~~~~~~~~~-~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~~~l~~~~~v~~-~Pt 88 (153)
T 2wz9_A 13 AVEEVGSAGQFEELLRL-KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGVPEVSEKYEISS-VPT 88 (153)
T ss_dssp CSEEECSHHHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-SSE
T ss_pred CeEEcCCHHHHHHHHHh-cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCCHHHHHHcCCCC-CCE
Confidence 466676 5888887742 237899999999999999999999999999974 59999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC------ccccCCcccHHHHH
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK------LIVPLSATNVDAFL 253 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~------~v~~~t~~~~~~fl 253 (554)
+++|.+|+.+.+..|. +.++|.+++.+.++.. .+..+++++++++.
T Consensus 89 ~~~~~~G~~~~~~~G~-~~~~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~~ 140 (153)
T 2wz9_A 89 FLFFKNSQKIDRLDGA-HAPELTKKVQRHASSGSFLPSAKVKVDTDPNSSSVD 140 (153)
T ss_dssp EEEEETTEEEEEEESS-CHHHHHHHHHHHSCTTSSCSCCCCCCC---------
T ss_pred EEEEECCEEEEEEeCC-CHHHHHHHHHHHhccccCCCccccccCCCCChhhHH
Confidence 9999999988777675 6789999999987543 35556777776654
No 85
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.65 E-value=1.7e-16 Score=134.05 Aligned_cols=99 Identities=17% Similarity=0.275 Sum_probs=85.9
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccC
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 212 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~ 212 (554)
+.++|++.+.. +.+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++.++++|+|.+ +||+++|++
T Consensus 8 ~~~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~ 83 (107)
T 1gh2_A 8 SDPDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQCQGTAATNNISA-TPTFQFFRN 83 (107)
T ss_dssp SGGGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-SSEEEEEET
T ss_pred CHHHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHhcCCCc-ccEEEEEEC
Confidence 56889888742 257899999999999999999999999999984 59999999999999999999997 999999999
Q ss_pred CeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 213 GRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 213 g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
|+.+....|. ..++|.+|+.+.+
T Consensus 84 G~~~~~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 84 KVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHH
T ss_pred CeEEEEEeCC-CHHHHHHHHHHhc
Confidence 9987766665 4466999998764
No 86
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.65 E-value=5e-16 Score=135.26 Aligned_cols=110 Identities=12% Similarity=0.192 Sum_probs=92.0
Q ss_pred cccccccccccc--cccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEE--ecCcHHHHHHhCCcCC
Q psy16770 128 HKLSTTHWNFEK--NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH--VHNEQGLARRLGVGSQ 203 (554)
Q Consensus 128 ~~~~Lt~~~F~~--~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd--~~~~~~l~~~~~v~~~ 203 (554)
.+..++..+|+. .......+++++|.||++||++|+.+.|.++++++.+++ ++.++.|| ++.+..++++|+|.+
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~~~~~~~~~v~~- 82 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKNIDLAYKYDANI- 82 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHHHHHHHHTTCCS-
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCchHHHHHHcCCcc-
Confidence 455667777761 111124678999999999999999999999999999974 69999999 999999999999997
Q ss_pred CCcceecc-CCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 204 LPQIALLT-DGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 204 ~Pti~~~~-~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+||++++. +|+.+....|..+.+.|.+++.+.+.+.
T Consensus 83 ~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 83 VPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred eeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhccc
Confidence 99999997 8988766656678899999999987665
No 87
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.65 E-value=1.5e-16 Score=135.76 Aligned_cols=104 Identities=14% Similarity=0.331 Sum_probs=92.1
Q ss_pred cccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCC
Q psy16770 126 LFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLP 205 (554)
Q Consensus 126 ~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~P 205 (554)
......+|.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++.++++|+|.+ +|
T Consensus 8 ~~~~~~~~~~~f~~~~---~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~~~~~~~~v~~-~P 81 (112)
T 1syr_A 8 HMVKIVTSQAEFDSII---SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVSEVTEKENITS-MP 81 (112)
T ss_dssp -CCEEECSHHHHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTHHHHHHTTCCS-SS
T ss_pred eeEEEECCHHHHHHHH---ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCHHHHHHcCCCc-cc
Confidence 3346678899999988 367899999999999999999999999999986 48999999999999999999997 99
Q ss_pred cceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 206 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 206 ti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
|++++++|+.+....|. +.+.|.+++.+.+
T Consensus 82 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 82 TFKVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 99999999987766676 8899999998754
No 88
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.65 E-value=6.7e-17 Score=139.87 Aligned_cols=106 Identities=20% Similarity=0.308 Sum_probs=89.7
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+..||.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.+|++|+|.+ +||+
T Consensus 4 ~v~~l~~~~f~~~~~--~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 79 (122)
T 3aps_A 4 ASIDLTPQTFNEKVL--QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKA-YPSV 79 (122)
T ss_dssp CSEECCHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred chhcCCHHHHHHHHh--cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCc-cceE
Confidence 477899999977665 4578999999999999999999999999999986 59999999999999999999997 9999
Q ss_pred eeccCCeE-EEEeC---CcccHHHHHHHHHHhCC
Q psy16770 208 ALLTDGRT-SFFKE---PSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 208 ~~~~~g~~-~~y~~---g~~~~~~i~~fl~~~~~ 237 (554)
++|.+|.. ..+.| |.++.+.|.+|+.+.+.
T Consensus 80 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 80 KLYQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EEEeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 99965543 33333 22588999999988754
No 89
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.65 E-value=1.9e-16 Score=134.81 Aligned_cols=104 Identities=14% Similarity=0.280 Sum_probs=89.0
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
+..+|.++| +.+. .+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++.++++++|.+ +||++
T Consensus 5 ~~~~~~~~f-~~~~---~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 77 (110)
T 2l6c_A 5 RDITTEAGM-AHFE---GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFER-VPTLV 77 (110)
T ss_dssp SBCGGGCSH-HHHT---TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCS-SCEEE
T ss_pred eecCCHHHH-HHHH---cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcc-cCEEE
Confidence 456788999 6663 56899999999999999999999999998875 58999999999999999999997 99999
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+|++|+.+....|..+.+.|.+++.+..++.
T Consensus 78 ~~~~G~~v~~~~G~~~~~~l~~~~~~~~~~~ 108 (110)
T 2l6c_A 78 FIRDGKVAKVFSGIMNPRELQALYASIHHHH 108 (110)
T ss_dssp EEESSSEEEEEESCCCHHHHHHHHHTC----
T ss_pred EEECCEEEEEEcCCCCHHHHHHHHHHHhhhc
Confidence 9999998877767678899999998876654
No 90
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.65 E-value=2.2e-16 Score=135.70 Aligned_cols=103 Identities=17% Similarity=0.364 Sum_probs=90.0
Q ss_pred ccccccc-ccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~Lt~-~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
.+.+++. ++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+ ++.++.||++.++.++++|+|.+ +||
T Consensus 14 ~v~~l~~~~~~~~~l~~-~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~-~Pt 88 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQ-HKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISA-MPT 88 (117)
T ss_dssp EEEECCSTTHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCS-SSE
T ss_pred eeEEeCCHHHHHHHHHh-CCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCc-cce
Confidence 3677887 899888742 25789999999999999999999999999887 58999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++++++|+.+....|. +.+.|.+++.+.+
T Consensus 89 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 117 (117)
T 2xc2_A 89 FIAIKNGEKVGDVVGA-SIAKVEDMIKKFI 117 (117)
T ss_dssp EEEEETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEeCCcEEEEEeCC-CHHHHHHHHHHhC
Confidence 9999999987766664 7789999998753
No 91
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.64 E-value=2.6e-15 Score=155.20 Aligned_cols=244 Identities=14% Similarity=0.185 Sum_probs=173.7
Q ss_pred HhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCC
Q psy16770 234 LKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDK 313 (554)
Q Consensus 234 ~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~ 313 (554)
...++.+..+.+.+++++|+.. ++.++|++|.+..++....+..++...+++.||.+ .+.+++++++++ .
T Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~---~~~~vvgff~~~~~~~~~~f~~~A~~~~~~~F~~t-----~~~~v~~~~~v~--~ 82 (361)
T 3uem_A 13 GPGSEFATTLPDGAAAESLVES---SEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGIT-----SNSDVFSKYQLD--K 82 (361)
T ss_dssp CCCCSSSEECCSHHHHHHHHHT---SSEEEEEECSCTTSHHHHHHHHHHHHCSSSCEEEE-----CCHHHHHHTTCS--S
T ss_pred CCccccceecCCHHHHHHHHhc---CCcEEEEEEcCCCchHHHHHHHHHhcCCCceEEEE-----CcHHHHHHhCCC--C
Confidence 3344443334466889999963 34444555655556666666666633478999999 789999999998 4
Q ss_pred ceEEEEeCCCCCCCceeecCCCChhHHHhHHhcCCCcccccccchhhhhhcCCCCceEEEEEc-CCCCcchhHHHHHHHH
Q psy16770 314 DSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFS-EDSPEHDASRHTLRRF 392 (554)
Q Consensus 314 Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~c~~~~lcvvl~~-~~~~~~~~~~~~l~~~ 392 (554)
|+|++|++..+.+ ..+.++++.+.|.+||+.+..|++.+++.+++....-...+..+|+|. +...++....+.++++
T Consensus 83 ~~i~lfk~f~~~~--~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~ 160 (361)
T 3uem_A 83 DGVVLFKKFDEGR--NNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTA 160 (361)
T ss_dssp SEEEEEESSTTSE--EECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHH
T ss_pred CeEEEEEecCCCc--cccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHH
Confidence 8999999865554 467788999999999999999999999987765544322245556665 4556788899999999
Q ss_pred HhhccCCCCceEEEEEecc--cchHHHHhhCCCCCCccccceEEEEEEec--CCCeeEEEecCCCCCcccccchhhHHHH
Q psy16770 393 AQESRFVHNNIAFMYVFIE--KQPEFVNALTSPEDSSEISLHIAAMWRMD--YKKIKYGWLLGDAVDDWKDYNTTKDRLD 468 (554)
Q Consensus 393 a~~~~~~~~~v~F~~vd~~--~q~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~ky~~~~~~~~~~~~~~~~t~e~l~ 468 (554)
|++ ++++ +.|+++|++ ...++++.|-.. . .++|.+...+ ....+|.+ +++ ..|.+.|.
T Consensus 161 A~~--~~~~-i~f~~vd~~~~~~~~~~~~fgi~---~---~~~P~~~~~~~~~~~~ky~~-~~~--------~~~~~~l~ 222 (361)
T 3uem_A 161 AES--FKGK-ILFIFIDSDHTDNQRILEFFGLK---K---EECPAVRLITLEEEMTKYKP-ESE--------ELTAERIT 222 (361)
T ss_dssp HGG--GTTT-CEEEEECTTSGGGHHHHHHTTCC---T---TTCSEEEEEECC--CCEECC-SSC--------CCCHHHHH
T ss_pred HHH--ccCc-eEEEEecCChHHHHHHHHHcCCC---c---cCCccEEEEEcCCcccccCC-Ccc--------ccCHHHHH
Confidence 999 9754 999999998 678888887111 1 1244333323 23467854 321 46889999
Q ss_pred HHHHhhhcCCCCCccccccccch-hhhhhhHHHHHHHHHH
Q psy16770 469 AGLRSLVNDPYNNLLYDTALKEI-SDEYIQSLGVRIFNRI 507 (554)
Q Consensus 469 ~fl~~~~~g~~~~~~~~~~lp~~-~de~~~~~~~r~~~~~ 507 (554)
+|+++++.|+.+|...+..+|+- .++.++.+.+..|.++
T Consensus 223 ~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~ 262 (361)
T 3uem_A 223 EFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDV 262 (361)
T ss_dssp HHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHH
T ss_pred HHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhh
Confidence 99999999999888888888874 5556666666666653
No 92
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.64 E-value=1.8e-16 Score=134.77 Aligned_cols=105 Identities=19% Similarity=0.361 Sum_probs=90.5
Q ss_pred cccc-ccccccccccC-CCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 129 KLST-THWNFEKNYIP-KSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 129 ~~~L-t~~~F~~~v~~-~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
+..+ +.++|++.+.. +..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.++.++++|+|.+ +||
T Consensus 4 v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~-~Pt 81 (112)
T 1ep7_A 4 VIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITA-MPT 81 (112)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCB-SSE
T ss_pred EEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCc-ccE
Confidence 5556 56889888842 11178999999999999999999999999999986 59999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++++++|+.+....|. +.+.|.+++.+.+
T Consensus 82 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 82 FHVYKDGVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp EEEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred EEEEECCeEEEEEcCC-CHHHHHHHHHHHh
Confidence 9999999987666666 7899999998764
No 93
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.64 E-value=2.6e-16 Score=132.04 Aligned_cols=99 Identities=20% Similarity=0.327 Sum_probs=87.5
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccC
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 212 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~ 212 (554)
+.++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||+++++.++++++|.+ +||+++|++
T Consensus 7 ~~~~~~~~l~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~ 82 (105)
T 3m9j_A 7 SKTAFQEALDA-AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASESEVKS-MPTFQFFKK 82 (105)
T ss_dssp SHHHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTCHHHHHHTTCCB-SSEEEEEET
T ss_pred CHHHHHHHHHh-cCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhhHHHHHHcCCCc-CcEEEEEEC
Confidence 46677777632 2578999999999999999999999999999864 8999999999999999999997 999999999
Q ss_pred CeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 213 GRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 213 g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
|+.+....|. +.+.|.+++.+.+
T Consensus 83 g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 83 GQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CeEEEEEeCC-CHHHHHHHHHHhC
Confidence 9988777777 8899999998764
No 94
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.64 E-value=2e-16 Score=152.25 Aligned_cols=108 Identities=20% Similarity=0.454 Sum_probs=97.8
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+..||.++|+..+. +++++++|.||++||++|+.+.|.|+++++.+++ .+.++.|||+.++.+|++|+|.+ +||+
T Consensus 13 ~~~~lt~~~f~~~v~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~-~Pt~ 88 (222)
T 3dxb_A 13 KIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRG-IPTL 88 (222)
T ss_dssp CCEECCTTTHHHHHT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCTTTGGGGTCCS-BSEE
T ss_pred CceeCCHHHHHHHHH--hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCCHHHHHHcCCCc-CCEE
Confidence 478899999999765 4678999999999999999999999999999986 49999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+++++|+.+....|..+.+.|.+|+.+.+...
T Consensus 89 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 89 LLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred EEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 99999998766667779999999999998655
No 95
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.64 E-value=5e-16 Score=138.07 Aligned_cols=106 Identities=24% Similarity=0.371 Sum_probs=80.4
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..+.+++.++|+..+. ..++ ++|.||++||++|+.+.|.++++++.+.+ ++.|+.||++.+..++++|+|.+ +||
T Consensus 33 ~~v~~l~~~~~~~~~~--~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt 107 (140)
T 1v98_A 33 PWVVEADEKGFAQEVA--GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHPGLAARYGVRS-VPT 107 (140)
T ss_dssp ------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred CccccCCHHHHHHHHH--cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCHHHHHHCCCCc-cCE
Confidence 3578899999999885 2344 99999999999999999999999999986 59999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+++|++|+.+....|..+.+.|.+|+.+.+.
T Consensus 108 ~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 108 LVLFRRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEEEeCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 9999999987666566788999999988754
No 96
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.63 E-value=3e-16 Score=135.73 Aligned_cols=106 Identities=15% Similarity=0.277 Sum_probs=91.9
Q ss_pred cccccccccccccccC-CCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLSTTHWNFEKNYIP-KSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~-~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
.+..++.++|+..+.. ++.+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.++.++++|+|.+ +||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~-~Pt 90 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELKPIAEQFSVEA-MPT 90 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCHHHHHHcCCCc-ccE
Confidence 4566788999998852 11478999999999999999999999999999875 8999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
++++++|+.+....|.. .+.|.+|+.+.++
T Consensus 91 ~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 91 FLFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 99999999876665665 7999999988754
No 97
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.63 E-value=2.4e-16 Score=135.88 Aligned_cols=101 Identities=12% Similarity=0.084 Sum_probs=84.0
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+.++|.++|.+.|...+.+++++|.|||+||++|+.+.|.++++|+++. ++.|++||+++. +++|+|.+ +||+
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~~---~~~~~v~~-~PT~ 77 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNSC---IQHYHDNC-LPTI 77 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGGT---STTCCGGG-CSEE
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHHh---HHHCCCCC-CCEE
Confidence 36788999999998744445599999999999999999999999999985 489999999986 58999997 9999
Q ss_pred eeccCCeEEEEeCCcc-------cHHHHHHHHHH
Q psy16770 208 ALLTDGRTSFFKEPSF-------SVQKMVEFFRL 234 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~-------~~~~i~~fl~~ 234 (554)
++|++|+.+....|.. +.++|..++.+
T Consensus 78 ~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 78 FVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 9999999877665542 45666666644
No 98
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.63 E-value=2.4e-16 Score=136.11 Aligned_cols=107 Identities=21% Similarity=0.313 Sum_probs=89.1
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCC----CCEEEEEEEecCcHHHHHHhCCcC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP----LGVGFFTVHVHNEQGLARRLGVGS 202 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~----~~v~~~~Vd~~~~~~l~~~~~v~~ 202 (554)
..+..|+.++|+..+. ..+++++|+||++||++|+.+.|.|+++++.+.+ .++.++.|||+.++ +++ +|.+
T Consensus 7 ~~v~~l~~~~f~~~v~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVL--DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSSEECCTTTTTTSSS--CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCeEEecccCHHHHhh--cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 3578899999999875 4578999999999999999999999999999975 25999999999876 665 9997
Q ss_pred CCCcceeccCCeE--EEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 203 QLPQIALLTDGRT--SFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 203 ~~Pti~~~~~g~~--~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+||+++|.+|.. ...+.|.++.+.|.+|+.+.+...
T Consensus 82 -~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 82 -FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp -SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred -CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 999999977632 333445568899999999887543
No 99
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.63 E-value=1.3e-16 Score=126.77 Aligned_cols=64 Identities=19% Similarity=0.331 Sum_probs=57.5
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCC
Q psy16770 18 SLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGT 85 (554)
Q Consensus 18 ~~d~y~~Lgv~~~--a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~ 85 (554)
..++|+||||+++ ++.++||+|||+|++++|||++++ .++|++|++||++|+|+.+|..+ .+|.
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~-~~g~ 75 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRM-NLGG 75 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTT-CCSS
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHH-hcCC
Confidence 3679999999999 999999999999999999999854 58999999999999999999984 4553
No 100
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.62 E-value=5.8e-16 Score=129.52 Aligned_cols=101 Identities=20% Similarity=0.333 Sum_probs=87.8
Q ss_pred cccc-ccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCccee
Q psy16770 131 STTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 209 (554)
Q Consensus 131 ~Lt~-~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~ 209 (554)
.++. ++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++.++++++|.+ +||+++
T Consensus 3 ~i~~~~~~~~~l~~-~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~-~Pt~~~ 78 (104)
T 2vim_A 3 VLATAADLEKLINE-NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTA-MPTFVF 78 (104)
T ss_dssp ECCSHHHHHHHHHT-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCS-SSEEEE
T ss_pred ecCCHHHHHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCcc-ccEEEE
Confidence 4555 788887742 267899999999999999999999999999986 58999999999999999999997 999999
Q ss_pred ccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 210 LTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 210 ~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+++|+.+....|. +.+.|.+++.+.+
T Consensus 79 ~~~g~~~~~~~G~-~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVDRFSGA-NETKLRETITRHK 104 (104)
T ss_dssp EETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EeCCcEEEEEeCC-CHHHHHHHHHhhC
Confidence 9999987776674 7899999998753
No 101
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.62 E-value=6.9e-16 Score=133.90 Aligned_cols=105 Identities=18% Similarity=0.314 Sum_probs=91.5
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec-CcHHHHHHhCCcCCCC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLP 205 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~-~~~~l~~~~~v~~~~P 205 (554)
..+..++.++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++ .+++++++|+|++ +|
T Consensus 18 ~~v~~l~~~~~~~~~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~v~~-~P 93 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVKA-AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQENKTLAKELGIRV-VP 93 (124)
T ss_dssp TSEEEECTTTHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSTTHHHHHHHCCSS-SS
T ss_pred CceEEecchhHHHHHHh-cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCcchHHHHHHcCCCe-ee
Confidence 45788999999988852 257899999999999999999999999999986 4899999998 6899999999997 99
Q ss_pred cceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 206 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 206 ti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
|++++++|+.+....|.. .++|.+++.+..
T Consensus 94 t~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 999999999877666664 799999998753
No 102
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.62 E-value=2.5e-16 Score=139.33 Aligned_cols=104 Identities=16% Similarity=0.085 Sum_probs=91.9
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe---------cCcHHHHHH
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------HNEQGLARR 197 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~---------~~~~~l~~~ 197 (554)
..+..+|.++|++.+. . +++|.|||+||++|+.+.|.++++++.++ +.++.||+ +.++.++++
T Consensus 16 ~~v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 16 GRLIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TEEEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CceeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 3578899999999883 2 99999999999999999999999999875 89999999 889999999
Q ss_pred hCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 198 LGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 198 ~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
|+|.+ +||++++++|+.+....|..+.+.+..++++.+.++
T Consensus 88 ~~v~~-~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 88 AGVEG-TPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HTCCS-SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred cCCce-eCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 99997 999999999998877777789899999999988765
No 103
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.62 E-value=3.6e-16 Score=135.44 Aligned_cols=103 Identities=19% Similarity=0.378 Sum_probs=89.4
Q ss_pred cccc-ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~L-t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
...+ +.++|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+.++.++.||++.+++++++|+|.+ +||+
T Consensus 17 ~~~i~~~~~f~~~l---~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~-~Pt~ 92 (121)
T 2j23_A 17 VQVISSYDQFKQVT---GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRA-MPTF 92 (121)
T ss_dssp EEECCSHHHHHHHH---SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCS-SSEE
T ss_pred eEEcCCHHHHHHHH---cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCc-ccEE
Confidence 3444 458899888 4678999999999999999999999999988765348999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++|++|+.+....|. +.+.|.+|+.+.+
T Consensus 93 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 93 VFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 999999987666666 8899999998765
No 104
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.62 E-value=7.2e-16 Score=134.26 Aligned_cols=105 Identities=17% Similarity=0.317 Sum_probs=91.1
Q ss_pred ccccc-ccccccccccCC-CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCC
Q psy16770 128 HKLST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLP 205 (554)
Q Consensus 128 ~~~~L-t~~~F~~~v~~~-~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~P 205 (554)
.+.+| |.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +|
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~-~P 93 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELKSVASDWAIQA-MP 93 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSHHHHHHTTCCS-SS
T ss_pred cEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHHcCCCc-cC
Confidence 46666 678898887521 147899999999999999999999999999986 59999999999999999999997 99
Q ss_pred cceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 206 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 206 ti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
|++++++|+.+....|. +.+.|.+++.+.+
T Consensus 94 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 123 (124)
T 1xfl_A 94 TFMFLKEGKILDKVVGA-KKDELQSTIAKHL 123 (124)
T ss_dssp EEEEEETTEEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEeCC-CHHHHHHHHHHhc
Confidence 99999999987766664 7899999998765
No 105
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.62 E-value=2.4e-16 Score=144.81 Aligned_cols=69 Identities=25% Similarity=0.411 Sum_probs=61.4
Q ss_pred CCCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCChh------HHHHHHHHHHHHHHcCChHHHHhhhccCC
Q psy16770 17 VSLDPYETLGVPRTAS--LQEIRKNYKRLVVEWHPDKNNDPT------AQEKFLQLTEAYNILSDAERRKQYDLFGT 85 (554)
Q Consensus 17 ~~~d~y~~Lgv~~~a~--~~~ik~ay~~l~~~~hPd~~~~~~------~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~ 85 (554)
...|||+||||+++++ .++||+|||+|+++||||++++.. +.++|..|++||++|+||.+|+.||....
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 4689999999999988 999999999999999999987543 66899999999999999999999998543
No 106
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.62 E-value=2.8e-16 Score=140.20 Aligned_cols=106 Identities=13% Similarity=0.136 Sum_probs=78.5
Q ss_pred cccccccccccccccCCCCCCcEEEEEEccc--ccccccchHHHHHHHHHhCCCCEE--EEEEEecCcHHHHHHhCCcCC
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVG--FFTVHVHNEQGLARRLGVGSQ 203 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~w--C~~C~~l~p~~~~~a~~l~~~~v~--~~~Vd~~~~~~l~~~~~v~~~ 203 (554)
.+..+|.++|++.+. ..+.++|.|+++| |++|+.+.|.|+++++++ + ++. +++||++++++++++|+|.+
T Consensus 18 ~~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~~~la~~~~V~~- 91 (142)
T 2es7_A 18 GWQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQSEAIGDRFNVRR- 91 (142)
T ss_dssp TCEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHHHHHHHTTTCCS-
T ss_pred cCcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCCHHHHHhcCCCc-
Confidence 457789999999884 4557889999988 999999999999999998 5 478 99999999999999999997
Q ss_pred CCcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 204 LPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 204 ~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+||+++|++|+.+....|.++.+.|.+++.+.+..+
T Consensus 92 iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 92 FPATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp SSEEEEESCC----CEESCCCHHHHHHHHHHHHC--
T ss_pred CCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 999999999998776666678899999999987765
No 107
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.61 E-value=3.7e-17 Score=148.31 Aligned_cols=68 Identities=31% Similarity=0.465 Sum_probs=59.7
Q ss_pred CCCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccCCCC
Q psy16770 17 VSLDPYETLGVPRTAS--LQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 87 (554)
Q Consensus 17 ~~~d~y~~Lgv~~~a~--~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~~~ 87 (554)
...|+|+||||+++|+ .++||+|||++|+++|||++++ +++|++|++||++|+||.+|+.||.+|...
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~~w 78 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGFW 78 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGGCC
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCCcc
Confidence 3479999999999998 6999999999999999999865 379999999999999999999999999643
No 108
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.61 E-value=7.9e-16 Score=149.35 Aligned_cols=108 Identities=24% Similarity=0.400 Sum_probs=96.2
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCC--CEEEEEEEecCcHHHHHHhCCcCCC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQL 204 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~--~v~~~~Vd~~~~~~l~~~~~v~~~~ 204 (554)
..+..++.++|+..+ ..+++++|.||++||++|+.+.|.|+++++.+.+. ++.++.|||+.++++|++|+|.+ +
T Consensus 130 ~~~~~~~~~~~~~~~---~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~ 205 (241)
T 3idv_A 130 EVTLVLTKENFDEVV---NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSG-Y 205 (241)
T ss_dssp CSSEECCTTTHHHHH---HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS-S
T ss_pred ccceeccHHHHHHhh---ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcc-c
Confidence 356778999999888 35679999999999999999999999999998642 39999999999999999999997 9
Q ss_pred CcceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 205 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 205 Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
||+++|++|+.+.|.|. ++.++|.+|+.+++++.
T Consensus 206 Pt~~~~~~g~~~~~~g~-~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 206 PTLKIFRKGRPYDYNGP-REKYGIVDYMIEQSGAA 239 (241)
T ss_dssp SEEEEEETTEEEECCSC-CSHHHHHHHHHHHTTCT
T ss_pred CEEEEEECCeEEEecCC-CCHHHHHHHHHhhhCCC
Confidence 99999999998887654 68899999999998765
No 109
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.61 E-value=6.8e-16 Score=132.31 Aligned_cols=99 Identities=20% Similarity=0.298 Sum_probs=84.1
Q ss_pred cccccc-ccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~Lt~-~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..++. ++|++.+ ..+++++|.||++||++|+.+.|.++++++++.+ +.++.||++.+++++++|+|.+ +||+
T Consensus 14 ~~~~~~~~~~~~~~---~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~-~Pt~ 87 (114)
T 2oe3_A 14 ITKLTNLTEFRNLI---KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTA-MPTF 87 (114)
T ss_dssp SCBCCSHHHHHHHH---HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-BSEE
T ss_pred eeecCCHHHHHHHH---hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCc-ccEE
Confidence 445554 4555555 3578999999999999999999999999999875 8999999999999999999997 9999
Q ss_pred eeccCCeEEEEeCCcccHHHHHHHHHH
Q psy16770 208 ALLTDGRTSFFKEPSFSVQKMVEFFRL 234 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~~~~~i~~fl~~ 234 (554)
+++++|+.+....|.. .+.|.+++.+
T Consensus 88 ~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 88 VLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred EEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 9999999876655655 7999998864
No 110
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.61 E-value=1.4e-15 Score=147.81 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=88.7
Q ss_pred cccccccccccccccccCCCCCCcEEEEEE--cccccccccchHHHHHHHHHhCC--CCEEEEEEEecC-----cHHHHH
Q psy16770 126 LFHKLSTTHWNFEKNYIPKSYTTPHLILFY--SDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVHN-----EQGLAR 196 (554)
Q Consensus 126 ~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fy--a~wC~~C~~l~p~~~~~a~~l~~--~~v~~~~Vd~~~-----~~~l~~ 196 (554)
...++.||..+|++.+ +.++++||.|| ||||+ +.|.|+++|+.+.+ ..+.|++|||+. ++++|+
T Consensus 15 ~~~v~~Lt~~nF~~vi---~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~ 87 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV---ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGD 87 (248)
T ss_dssp CTTCEECCTTTHHHHH---TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHH
T ss_pred CCCcEECCHHHHHHHH---hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHH
Confidence 3458889999999966 46779999999 99999 99999999999853 259999999999 899999
Q ss_pred HhCCc--CCCCcceeccCCe---EEEE--eCCcccHHHHHHHHHHhCC
Q psy16770 197 RLGVG--SQLPQIALLTDGR---TSFF--KEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 197 ~~~v~--~~~Pti~~~~~g~---~~~y--~~g~~~~~~i~~fl~~~~~ 237 (554)
+|+|+ + |||+++|+ |+ +..| .| .++.+.|++|+.+.++
T Consensus 88 ~~~V~~~~-~PTl~~F~-G~~~~~~~y~~~G-~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 88 RYKVDDKN-FPSIFLFK-GNADEYVQLPSHV-DVTLDNLKAFVSANTP 132 (248)
T ss_dssp HTTCCTTS-CCEEEEES-SSSSSEEECCTTS-CCCHHHHHHHHHHHSS
T ss_pred HhCCCcCC-CCeEEEEe-CCcCcceeecccC-CCCHHHHHHHHHHhhc
Confidence 99999 9 99999999 87 3555 44 4688999999999875
No 111
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.60 E-value=5.6e-16 Score=139.60 Aligned_cols=102 Identities=15% Similarity=0.223 Sum_probs=87.6
Q ss_pred cccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceecc
Q psy16770 132 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 211 (554)
Q Consensus 132 Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~ 211 (554)
.|.++|+..+.. +.+++++|.|||+||++|+.+.|.++++++++.+. +.+++||++++++++++|+|.+ +||+++++
T Consensus 9 ~~~~~~~~~i~~-~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~-~Pt~~~~~ 85 (149)
T 3gix_A 9 TSKKEVDQAIKS-TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISY-IPSTVFFF 85 (149)
T ss_dssp CSHHHHHHHHHH-CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCS-SSEEEEEE
T ss_pred CCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCc-cCeEEEEE
Confidence 367788888752 24789999999999999999999999999999763 9999999999999999999997 99999999
Q ss_pred CCeEE---------EEeCC-cccHHHHHHHHHHhC
Q psy16770 212 DGRTS---------FFKEP-SFSVQKMVEFFRLKL 236 (554)
Q Consensus 212 ~g~~~---------~y~~g-~~~~~~i~~fl~~~~ 236 (554)
+|+.+ ....| ..+.+.|.+++....
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 99987 44445 668888888887653
No 112
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.60 E-value=2.1e-16 Score=136.13 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=84.0
Q ss_pred cccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEE----EecCcHHHHHHhCCc
Q psy16770 126 LFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTV----HVHNEQGLARRLGVG 201 (554)
Q Consensus 126 ~~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~V----d~~~~~~l~~~~~v~ 201 (554)
......+|.++|+..+. .+++++|.||++||++|+++.|.++++++.+.. .+.++.+ |++..+.++++|+|.
T Consensus 11 ~~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~i~ 86 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALD---KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYFINSEEPSQLNDLQAFRSRYGIP 86 (118)
T ss_dssp TTTSEECCHHHHHHHHH---TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEEEETTCGGGHHHHHHHHHHHTCC
T ss_pred HhhhhcCCHHHHHHHHh---CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEEEECCCcCcHHHHHHHHHHcCCC
Confidence 34566788899998873 567999999999999999999999999998863 3555422 223346899999999
Q ss_pred CCCCcceeccCCeEEEEeCCcccHHHHHHHHH
Q psy16770 202 SQLPQIALLTDGRTSFFKEPSFSVQKMVEFFR 233 (554)
Q Consensus 202 ~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~ 233 (554)
+ +||+++|++|+.+....|..+.+.|.+|+.
T Consensus 87 ~-~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 87 T-VPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp S-SCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred C-CCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 7 999999999998877777778899999885
No 113
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.59 E-value=1.3e-16 Score=129.12 Aligned_cols=63 Identities=25% Similarity=0.357 Sum_probs=56.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--hhHHHHHHHHHHHHHHcCChHHHH
Q psy16770 16 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRK 78 (554)
Q Consensus 16 ~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~--~~~~~~~~~i~~Ay~~L~~~~~r~ 78 (554)
....++|+||||+++|+.++||+|||+|+++||||++++ +.+.++|++|++||++|+|...|.
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 345789999999999999999999999999999999976 358899999999999999987773
No 114
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.59 E-value=5.2e-16 Score=141.58 Aligned_cols=66 Identities=20% Similarity=0.437 Sum_probs=60.2
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChh----HHHHHHHHHHHHHHcCChHHHHhh
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSDAERRKQY 80 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~----~~~~~~~i~~Ay~~L~~~~~r~~y 80 (554)
.+...|+|++|||++.|+.++||+|||+|+++|||||++... |.++|++|++||++|+|+.+|+.|
T Consensus 113 l~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 113 LWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp SCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred hcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 344579999999999999999999999999999999987543 789999999999999999999887
No 115
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.59 E-value=6.3e-16 Score=125.25 Aligned_cols=56 Identities=20% Similarity=0.434 Sum_probs=51.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----hHHHHHHHHHHHHHHcCC
Q psy16770 18 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSD 73 (554)
Q Consensus 18 ~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~----~~~~~~~~i~~Ay~~L~~ 73 (554)
..++|++|||++.|+.++||+|||+++++|||||+++. .|+++|+.|++||++|.+
T Consensus 32 ~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp TCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999998753 378899999999999975
No 116
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.37 E-value=1.2e-16 Score=133.99 Aligned_cols=103 Identities=23% Similarity=0.416 Sum_probs=90.9
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
+.+||.++|.+.+. +.+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.+..++++++|.+ +||++
T Consensus 3 v~~l~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 78 (106)
T 2yj7_A 3 VIEVTDENFEQEVL--KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDENPNTAAQYGIRS-IPTLL 78 (106)
Confidence 56789999998775 4578999999999999999999999999999876 59999999999999999999997 99999
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
++++|+.+....|..+.+++.+++.+.
T Consensus 79 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999998776666666788899888764
No 117
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.58 E-value=6.3e-16 Score=141.51 Aligned_cols=67 Identities=22% Similarity=0.374 Sum_probs=60.9
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCChh------HHHHHHHHHHHHHHcCChHHHHhhhccCC
Q psy16770 19 LDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPT------AQEKFLQLTEAYNILSDAERRKQYDLFGT 85 (554)
Q Consensus 19 ~d~y~~Lgv~~~a--~~~~ik~ay~~l~~~~hPd~~~~~~------~~~~~~~i~~Ay~~L~~~~~r~~yd~~~~ 85 (554)
.|||++|||++++ +.++||+|||+|+++||||++++.. |.++|..|++||++|+||.+|+.||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 3799999999999 9999999999999999999987532 45789999999999999999999998754
No 118
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.57 E-value=2e-15 Score=129.43 Aligned_cols=107 Identities=17% Similarity=0.310 Sum_probs=90.8
Q ss_pred cccc-ccccccccccCC-CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 129 KLST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 129 ~~~L-t~~~F~~~v~~~-~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
++.+ +.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++.++++|+|.+ +||
T Consensus 8 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~-~Pt 84 (118)
T 2vm1_A 8 VIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEA-MPT 84 (118)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-BSE
T ss_pred eEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCc-CcE
Confidence 4555 578898888421 137899999999999999999999999999986 58999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
++++++|+.+.+..|. +.+.|.+++.+.+...
T Consensus 85 ~~~~~~g~~~~~~~g~-~~~~l~~~l~~~~~~~ 116 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVGG-RKDDIHTKIVALMGSA 116 (118)
T ss_dssp EEEEETTEEEEEEESC-CHHHHHHHHHHHHC--
T ss_pred EEEEeCCeEEEEecCC-CHHHHHHHHHHHhccc
Confidence 9999999987776674 7899999998876543
No 119
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.57 E-value=1.8e-15 Score=130.43 Aligned_cols=101 Identities=18% Similarity=0.226 Sum_probs=86.0
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccC
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 212 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~ 212 (554)
+..+|++.+. +++++++|.||++||++|+.+.|.++++++.+ + ++.++.||++.++.++++|+|.+ +||+++|.+
T Consensus 11 ~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~~~~~~~~~i~~-~Pt~~~~~~ 85 (118)
T 2f51_A 11 THEALLNRIK--EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKNGNAADAYGVSS-IPALFFVKK 85 (118)
T ss_dssp CHHHHHHHHH--HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTCHHHHHHTTCCS-SSEEEEEEE
T ss_pred CHHHHHHHHH--hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCCHHHHHhcCCCC-CCEEEEEeC
Confidence 6778886664 34789999999999999999999999999998 3 59999999999999999999997 999999987
Q ss_pred ----CeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 213 ----GRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 213 ----g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
|+.+....|..+ ++|.+.+.+..+++
T Consensus 86 ~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 86 EGNEIKTLDQFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp ETTEEEEEEEEESCCH-HHHHHHHHHHC---
T ss_pred CCCcceEEEeecCCCH-HHHHHHHHHhhhcc
Confidence 888777667644 77999999887764
No 120
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.57 E-value=2.3e-15 Score=132.73 Aligned_cols=104 Identities=13% Similarity=0.248 Sum_probs=87.9
Q ss_pred ccccccc-ccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~Lt~-~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
.+++++. ++|+..+. ...+++++|.||++||++|+.+.|.++++++.+ ++.++.||++.+..++++|+|.+ +||
T Consensus 21 ~v~~l~~~~~~~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~-~Pt 95 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFS-STQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKA-LPT 95 (133)
T ss_dssp EEEECCCTTHHHHHHT-C-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred cEEEecChhHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCC-CCE
Confidence 4677775 78877664 334679999999999999999999999988876 48999999999999999999997 999
Q ss_pred ceecc--CCe--EEEEeCCcccHHHHHHHHHHhCC
Q psy16770 207 IALLT--DGR--TSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 207 i~~~~--~g~--~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+++|+ +|+ .+....|. +.++|.+++.+.+.
T Consensus 96 ~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 96 FEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 99996 887 66666666 78999999998764
No 121
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.57 E-value=1.4e-15 Score=143.26 Aligned_cols=68 Identities=19% Similarity=0.278 Sum_probs=60.6
Q ss_pred CCCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCChh------HHHHHHHHHHHHHHcCChHHHHhhhcc
Q psy16770 16 AVSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDPT------AQEKFLQLTEAYNILSDAERRKQYDLF 83 (554)
Q Consensus 16 ~~~~d~y~~Lgv~~~--a~~~~ik~ay~~l~~~~hPd~~~~~~------~~~~~~~i~~Ay~~L~~~~~r~~yd~~ 83 (554)
....|||++|||+++ ++.++||+|||+|++++|||++++.. +.++|+.|++||++|+||.+|+.||..
T Consensus 40 ~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 40 DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp CTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 346899999999996 78999999999999999999987432 567899999999999999999999964
No 122
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=1.7e-15 Score=133.99 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=87.2
Q ss_pred cccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
.+..||.++|++.|...+.+++++|.|||+||++|+.+.|.|+++++.+. ++.|++||++.+. ++|+|.+ +||+
T Consensus 11 ~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~---~~~~i~~-~Pt~ 84 (135)
T 2dbc_A 11 ELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCI---EHYHDNC-LPTI 84 (135)
T ss_dssp SCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSC---SSCCSSC-CSEE
T ss_pred ceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCc---ccCCCCC-CCEE
Confidence 36778999999998754445799999999999999999999999999985 5999999999875 7899997 9999
Q ss_pred eeccCCeEEEEeCCcc-------cHHHHHHHHHHh
Q psy16770 208 ALLTDGRTSFFKEPSF-------SVQKMVEFFRLK 235 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~~-------~~~~i~~fl~~~ 235 (554)
++|++|+.+....|.. +.+.|..++.+.
T Consensus 85 ~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 85 FVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9999998866655543 678888888876
No 123
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.56 E-value=2.2e-15 Score=128.12 Aligned_cols=104 Identities=18% Similarity=0.361 Sum_probs=89.5
Q ss_pred cccc-ccccccccccCC-CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 129 KLST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 129 ~~~L-t~~~F~~~v~~~-~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
+..+ +.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++.++++|+|.+ +||
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~Pt 82 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEA-MPT 82 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSS-TTE
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCc-ccE
Confidence 4555 668898887531 247899999999999999999999999999986 59999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++++++|+.+....|. +.+.|.+++.+.+
T Consensus 83 ~~~~~~G~~~~~~~g~-~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVGA-DKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEETTEEEEEEECC-CTTHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEecC-CHHHHHHHHHHhh
Confidence 9999999987776674 7789999998764
No 124
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.56 E-value=2.1e-15 Score=134.61 Aligned_cols=100 Identities=10% Similarity=0.262 Sum_probs=81.8
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccC
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 212 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~ 212 (554)
+.++|+..+.. .++++++|.|||+||++|+.+.|.++++++++++ ++.++.||++++++++++|+|.+ +||+++|++
T Consensus 10 ~~~~~~~~v~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~~~~~~~i~~-~Pt~~~~~~ 86 (142)
T 1qgv_A 10 NGWQVDQAILS-EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPDFNKMYELYD-PCTVMFFFR 86 (142)
T ss_dssp SHHHHHHHHHT-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTSSCSCS-SCEEEEEET
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHHHHHHcCCCC-CCEEEEEEC
Confidence 56788877752 1478999999999999999999999999999976 49999999999999999999997 999999999
Q ss_pred CeEEEEeCC---------cc-cHHHHHHHHHHh
Q psy16770 213 GRTSFFKEP---------SF-SVQKMVEFFRLK 235 (554)
Q Consensus 213 g~~~~y~~g---------~~-~~~~i~~fl~~~ 235 (554)
|+.+....| .. +.+++.+++.+.
T Consensus 87 G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp TEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 988753222 12 356666666544
No 125
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.55 E-value=7.2e-14 Score=136.28 Aligned_cols=183 Identities=11% Similarity=0.143 Sum_probs=129.7
Q ss_pred CCCcEEEEEEccc--ccccccchHHHHHHHHHh---CCCC-EEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEe
Q psy16770 146 YTTPHLILFYSDW--CFACLQVEPIFKKLMDEL---SPLG-VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFK 219 (554)
Q Consensus 146 ~~~~~lV~Fya~w--C~~C~~l~p~~~~~a~~l---~~~~-v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~ 219 (554)
-.++++|.||++| |++|+.+.|.++++|+.. ++.. +.|+++|+++++++|++|||++ +||+++| +| ...|.
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~-~Pt~~i~-~g-~~~~~ 100 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVER-VPTVAFL-GG-EVRWT 100 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCS-SSEEEET-TT-TEEEE
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCc-CCEEEEE-CC-ceeEc
Confidence 4579999999999 999999999999999884 2211 9999999999999999999997 9999999 67 66676
Q ss_pred CCcccHHHHHHHHHHhC---CCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----Hhhcc----CCc
Q psy16770 220 EPSFSVQKMVEFFRLKL---PYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKH----RTT 287 (554)
Q Consensus 220 ~g~~~~~~i~~fl~~~~---~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~----~~~ 287 (554)
|.. ..+.+..|+...+ +.. ..++++..+... .. ..++.++.|....-+...... .+..+ .+.
T Consensus 101 G~~-~~~~l~~fv~~~l~~~~~~--~~l~~~~~~~~~-~~--~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~ 174 (243)
T 2hls_A 101 GIP-AGEEIRALVEVIMRLSEDE--SGLEDATKEALK-SL--KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPV 174 (243)
T ss_dssp SCC-CTTHHHHHHHHHHHHHTTC--CCCCHHHHHHHH-HC--CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCC-cHHHHHHHHHHHHhccCCC--CCCCHHHHHHHH-Hc--CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCc
Confidence 654 5577888877643 221 123444444432 21 355656655332222222111 11222 167
Q ss_pred eEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 288 IVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 288 v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+.++.++++ .+++++++|+|.+ .||+++ + .+ .++.|..+.+.|.++|...
T Consensus 175 v~~~~vd~~--~~~~~~~~~~V~~-vPt~~i--~-G~----~~~~G~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 175 ILSEAVEAY--ENPDIADKYGVMS-VPSIAI--N-GY----LVFVGVPYEEDFLDYVKSA 224 (243)
T ss_dssp EEEEEEETT--TCHHHHHHTTCCS-SSEEEE--T-TE----EEEESCCCHHHHHHHHHHH
T ss_pred EEEEEEECc--cCHHHHHHcCCee-eCeEEE--C-CE----EEEeCCCCHHHHHHHHHHH
Confidence 999999987 6789999999997 999988 2 22 2477888888898888754
No 126
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.55 E-value=1e-15 Score=128.37 Aligned_cols=60 Identities=22% Similarity=0.212 Sum_probs=53.4
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh--------hHHHHHHHHHHHHHHcCChH
Q psy16770 15 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP--------TAQEKFLQLTEAYNILSDAE 75 (554)
Q Consensus 15 ~~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~--------~~~~~~~~i~~Ay~~L~~~~ 75 (554)
.....|+|+|||+++ ||.++||+|||+++++|||||++++ .|+++|++|++||++|+|+.
T Consensus 37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 455689999999996 9999999999999999999998632 36889999999999999985
No 127
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.55 E-value=2.2e-15 Score=133.53 Aligned_cols=105 Identities=14% Similarity=0.210 Sum_probs=90.1
Q ss_pred cccc-ccccccccccCC-CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 129 KLST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 129 ~~~L-t~~~F~~~v~~~-~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
+..+ +.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++.++++|+|.+ +||
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~Pt 102 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDELSDFSASWEIKA-TPT 102 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCE-ESE
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcccHHHHHHcCCCc-ccE
Confidence 4455 478998877421 247799999999999999999999999999985 58999999999999999999998 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
++++++|+.+....|. +.++|.+++.+.++
T Consensus 103 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 103 FFFLRDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp EEEEETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred EEEEcCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 9999999988776676 77999999987754
No 128
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.55 E-value=7.7e-15 Score=142.16 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=88.1
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEc--ccccccccchHHHHHHHHHhCC-CCEEEEEEE-----ecCcHHHHHHh
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYS--DWCFACLQVEPIFKKLMDELSP-LGVGFFTVH-----VHNEQGLARRL 198 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya--~wC~~C~~l~p~~~~~a~~l~~-~~v~~~~Vd-----~~~~~~l~~~~ 198 (554)
..++.||..+|++.| ..+++++|.||| |||+ +.|.|+++++.+.+ .++.|++|| |+.++++|++|
T Consensus 5 ~~v~~Lt~~nF~~~i---~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~ 77 (240)
T 2qc7_A 5 KGALPLDTVTFYKVI---PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKY 77 (240)
T ss_dssp TTCEECCTTHHHHHG---GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHT
T ss_pred CCceECCHHHHHHHH---cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHc
Confidence 357889999999977 356799999999 9999 99999999999974 359999999 56699999999
Q ss_pred CCc--CCCCcceeccCCe---EEEEeCCcccHHHHHHHHHHhC
Q psy16770 199 GVG--SQLPQIALLTDGR---TSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 199 ~v~--~~~Pti~~~~~g~---~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+|+ + |||+++|++|+ +..|. |.++.+.|++|+.+..
T Consensus 78 ~V~~~~-~PTl~~f~~G~~~~~~~y~-G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 78 KLDKES-YPVFYLFRDGDFENPVPYT-GAVKVGAIQRWLKGQG 118 (240)
T ss_dssp TCCGGG-CSEEEEEETTCSSCCEECC-SCSCHHHHHHHHHHTT
T ss_pred CCCCCC-CCEEEEEeCCCcCcceeec-CCCCHHHHHHHHHHhc
Confidence 999 9 99999999998 45555 5568899999999884
No 129
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.53 E-value=1.3e-14 Score=139.49 Aligned_cols=105 Identities=13% Similarity=0.087 Sum_probs=89.1
Q ss_pred cccccccccccccccCCCCCCcE-EEEEEcccccccccchHHHHHHHHHhCC---CCEEEEEEEecCcHHHHHHhCCcCC
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPH-LILFYSDWCFACLQVEPIFKKLMDELSP---LGVGFFTVHVHNEQGLARRLGVGSQ 203 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~-lV~Fya~wC~~C~~l~p~~~~~a~~l~~---~~v~~~~Vd~~~~~~l~~~~~v~~~ 203 (554)
....|+.++|+... ..++++ +|.|||+||++|+++.|.|+++++.+.+ .++.++.||++.++.+|++|+|.+
T Consensus 117 ~~~~l~~~~~~~~~---~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~- 192 (226)
T 1a8l_A 117 EETNLMDETKQAIR---NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMA- 192 (226)
T ss_dssp TCCCCCHHHHHHHT---TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCS-
T ss_pred CCCCCCHHHHHHHH---hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcc-
Confidence 35567888887765 344566 9999999999999999999999999861 259999999999999999999997
Q ss_pred CCcceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 204 LPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 204 ~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+||+++|++|+....+.|.++.+.|.+|+.+.+
T Consensus 193 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 193 VPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp SCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cCeEEEEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 999999999987766666678899999998753
No 130
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.52 E-value=3.4e-15 Score=137.56 Aligned_cols=69 Identities=32% Similarity=0.463 Sum_probs=61.9
Q ss_pred ccCCCCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHHHhhhccC
Q psy16770 14 NCAVSLDPYETL------GVPR-TASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFG 84 (554)
Q Consensus 14 ~~~~~~d~y~~L------gv~~-~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r~~yd~~~ 84 (554)
++....|||+|| |+++ +++.++||+|||+|+++||||++++ +.++|+.|++||++|+||.+|+.||...
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 566778999999 4665 8999999999999999999999875 7789999999999999999999999844
No 131
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.3e-15 Score=117.11 Aligned_cols=57 Identities=18% Similarity=0.299 Sum_probs=51.5
Q ss_pred CCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChHHH
Q psy16770 18 SLDPYETLGVPR-TASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERR 77 (554)
Q Consensus 18 ~~d~y~~Lgv~~-~a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~~r 77 (554)
..++|+||||++ +++.++||+|||+|+++||||++. +.++|++|++||++|+++..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g---~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG---SPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC---CHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC---CHHHHHHHHHHHHHHhhhhhc
Confidence 468999999999 799999999999999999999974 457999999999999998655
No 132
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.51 E-value=2.9e-13 Score=130.53 Aligned_cols=201 Identities=15% Similarity=0.208 Sum_probs=147.7
Q ss_pred ccccc-ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~L-t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
..++| |.++|++.+ +.+++++|.|+++| |..+.+.|.++|+.+. .+.|+. +.++++|+++++++ |+
T Consensus 10 ~~~~l~s~~~~~~~l---~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~--~~~F~~---t~~~~v~~~~~v~~--p~ 76 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFI---AATEVAVIGFFQDL---EIPAVPILHSMVQKFP--GVSFGI---STDSEVLTHYNITG--NT 76 (227)
T ss_dssp CCEECCSHHHHHHHH---HTSSEEEEEECSCS---CSTHHHHHHHHTTTCT--TSEEEE---ECCHHHHHHTTCCS--SE
T ss_pred CCeeeCCHHHHHHHH---hcCCeEEEEEecCC---CchhHHHHHHHHHhCC--CceEEE---ECCHHHHHHcCCCC--Ce
Confidence 34455 668999887 46789999999998 5789999999999994 588876 45789999999984 99
Q ss_pred ceeccCC--eEEEEeC---CcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCch---hHH--
Q psy16770 207 IALLTDG--RTSFFKE---PSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPV---RLR-- 276 (554)
Q Consensus 207 i~~~~~g--~~~~y~~---g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~---~~~-- 276 (554)
|++|+++ ....|.| |.++.++|.+|+.....|. +..+|.+++.++++. ..+.++++|.+.... .+.
T Consensus 77 i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~pl-v~e~t~~n~~~~~~~---~~~~~~l~f~~~~~~~~~~~~~~ 152 (227)
T 4f9z_D 77 ICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHM-VTEYNPVTVIGLFNS---VIQIHLLLIMNKASPEYEENMHR 152 (227)
T ss_dssp EEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCS-EEECCHHHHHHHHHS---SCCEEEEEEECTTSTTHHHHHHH
T ss_pred EEEEEecCcccccccccccCCCCHHHHHHHHHHhCCCc-eeecCcccHHHHhcc---CCceEEEEEEcCCcchHHHHHHH
Confidence 9999763 4567765 3468899999999998877 788899998888742 344555667543222 222
Q ss_pred HHHHhhccCCceEEEEEEccCCCChhHHhHhCCCC-CCceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 277 YLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPG-DKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 277 ~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~-~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+...|-.+++++.|++++++......+++.||++. ..|++++++...... .....++++.+.|.+|++.
T Consensus 153 ~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~k-y~~~~~~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 153 YQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEW-DTLPTAEVSVEHVQNFCDG 222 (227)
T ss_dssp HHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCE-EEETTCCCCHHHHHHHHHH
T ss_pred HHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCcc-ccCCcCCCCHHHHHHHHHH
Confidence 22223378889999999986333556889999982 489999998543211 1222467899999999874
No 133
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.50 E-value=4.7e-15 Score=141.93 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=89.5
Q ss_pred ccccc-ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~L-t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
.+.+| +.++|.+.|...+.+++++|.||++||++|+.+.|.|.++++.+. ++.|++||++ ++.++.+|+|.+ +||
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~~~l~~~~~i~~-~PT 175 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-NTGAGDRFSSDV-LPT 175 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-HHTCSTTSCGGG-CSE
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-cHHHHHHCCCCC-CCE
Confidence 36677 889999988644455899999999999999999999999999985 5999999999 888999999998 999
Q ss_pred ceeccCCeEEEEeCCcccH-------HHHHHHHHHh
Q psy16770 207 IALLTDGRTSFFKEPSFSV-------QKMVEFFRLK 235 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~-------~~i~~fl~~~ 235 (554)
+++|++|+.+....|..+. ++|..|+.+.
T Consensus 176 l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9999999987776676553 7888888754
No 134
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=8e-15 Score=128.17 Aligned_cols=109 Identities=10% Similarity=0.259 Sum_probs=89.3
Q ss_pred ccccccccccccccCC-CCCCcEEEEEEcccccccccchHHH---HHHHHHhCCCCEEEEEEEec--CcHHHHHHhCCcC
Q psy16770 129 KLSTTHWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGS 202 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~-~~~~~~lV~Fya~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~~--~~~~l~~~~~v~~ 202 (554)
.+.++..+|++.+... ..+++++|.||++||++|+.+.|.+ +++++.++. ++.++.||++ .+..+|++|+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~ 86 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELRKKYGVHA 86 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHHHHTTCCS
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHHHHcCCCC
Confidence 4556778888776311 2467999999999999999999999 777776654 4889999998 5789999999997
Q ss_pred CCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 203 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 203 ~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+||++++ ++|+.+....|..+.+.|.+++.+.+.+.
T Consensus 87 -~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 87 -YPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp -SCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred -CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 9999999 78988766556668899999999887654
No 135
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.50 E-value=4.1e-15 Score=129.88 Aligned_cols=108 Identities=17% Similarity=0.322 Sum_probs=92.0
Q ss_pred ccccc-ccccccccccC-CCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCC
Q psy16770 128 HKLST-THWNFEKNYIP-KSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLP 205 (554)
Q Consensus 128 ~~~~L-t~~~F~~~v~~-~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~P 205 (554)
.+..+ +.++|++.+.. +..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.++.++++|+|.+ +|
T Consensus 15 ~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~P 91 (130)
T 1wmj_A 15 VVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEA-MP 91 (130)
T ss_dssp SSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCS-SC
T ss_pred ceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCc-cc
Confidence 35566 46888888753 1247899999999999999999999999999986 58999999999999999999997 99
Q ss_pred cceeccCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 206 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 206 ti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
|++++++|+.+....|. +.+.|.+++.+.+...
T Consensus 92 t~~~~~~g~~~~~~~g~-~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 92 TFLFIKDGAEADKVVGA-RKDDLQNTIVKHVGAT 124 (130)
T ss_dssp CCCBCTTTTCCBCCCTT-CTTTHHHHHHHHTSSS
T ss_pred eEEEEeCCeEEEEEeCC-CHHHHHHHHHHHHhcc
Confidence 99999999887766674 7789999999887543
No 136
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.48 E-value=5.3e-14 Score=113.02 Aligned_cols=83 Identities=20% Similarity=0.359 Sum_probs=73.4
Q ss_pred CcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHH
Q psy16770 148 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 227 (554)
Q Consensus 148 ~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~ 227 (554)
.+.+|.||++||++|+++.|.++++++++.+ ++.+..||+++++++++++||.+ +||+++ +|+. .+. |..+.+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~--~G~~-~~~-G~~~~~~ 76 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMENPQKAMEYGIMA-VPTIVI--NGDV-EFI-GAPTKEA 76 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSSCCTTTSTTTCC-SSEEEE--TTEE-ECC-SSSSSHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCCHHHHHHCCCcc-cCEEEE--CCEE-eee-cCCCHHH
Confidence 3679999999999999999999999999875 59999999999999999999997 999998 8887 455 4457899
Q ss_pred HHHHHHHhC
Q psy16770 228 MVEFFRLKL 236 (554)
Q Consensus 228 i~~fl~~~~ 236 (554)
|.+++.+.+
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998753
No 137
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.47 E-value=5.6e-14 Score=123.40 Aligned_cols=88 Identities=19% Similarity=0.472 Sum_probs=78.7
Q ss_pred CCCcEEEEEEcccccccccchHHHH--HHHHHhCCCCEEEEEEEe---cCcHHHHHHhCC---cCCCCcceec-cCCeEE
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFK--KLMDELSPLGVGFFTVHV---HNEQGLARRLGV---GSQLPQIALL-TDGRTS 216 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~--~~a~~l~~~~v~~~~Vd~---~~~~~l~~~~~v---~~~~Pti~~~-~~g~~~ 216 (554)
.+++++|.||++||++|+.+.|.++ ++++.+++ ++.++.||+ +.+..++++|+| .+ +||+++| ++|+.+
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~~v~~~~~-~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAYGDPIQDG-IPAVVVVNSDGKVR 105 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHTTCGGGGC-SSEEEEECTTSCEE
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHhCCccCCc-cceEEEECCCCCEE
Confidence 5789999999999999999999999 99998865 599999999 899999999999 97 9999999 899988
Q ss_pred EEeCC-------cccHHHHHHHHHHh
Q psy16770 217 FFKEP-------SFSVQKMVEFFRLK 235 (554)
Q Consensus 217 ~y~~g-------~~~~~~i~~fl~~~ 235 (554)
....| ..+.+.+.+|+.+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHh
Confidence 77666 56778888888764
No 138
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.46 E-value=2e-14 Score=139.65 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=87.5
Q ss_pred ccccc-ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~L-t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
.+..| +.++|...|...+.+++++|.|||+||++|+.+.|.|.++++.+. ++.|++||++. ..++.+|+|.+ +||
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~-~~l~~~~~I~~-~PT 188 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN-TGAGDRFSSDV-LPT 188 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH-HCCTTSSCTTT-CSE
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc-HHHHHHCCCCC-CCE
Confidence 36677 789999998644457899999999999999999999999999986 48999999987 77899999997 999
Q ss_pred ceeccCCeEEEEeCCc-------ccHHHHHHHHHHh
Q psy16770 207 IALLTDGRTSFFKEPS-------FSVQKMVEFFRLK 235 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~-------~~~~~i~~fl~~~ 235 (554)
+++|++|+.+....|. .+.+.|..|+.+.
T Consensus 189 ll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 189 LLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp EEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 9999999887665443 2456788888765
No 139
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.45 E-value=7.3e-14 Score=112.19 Aligned_cols=82 Identities=17% Similarity=0.261 Sum_probs=73.1
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHH
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKM 228 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i 228 (554)
+.+|.||++||++|+++.|.++++++++.+ ++.+..||+++++++++++||.+ +||+++ +|+. .+.|. .+.+.|
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~--~G~~-~~~G~-~~~~~l 76 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVDREKAIEYGLMA-VPAIAI--NGVV-RFVGA-PSREEL 76 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTCGGGGGGTCSSC-SSEEEE--TTTE-EEECS-SCCHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhCCcee-eCEEEE--CCEE-EEccC-CCHHHH
Confidence 468999999999999999999999999986 59999999999999999999997 999998 8887 55654 577999
Q ss_pred HHHHHHhC
Q psy16770 229 VEFFRLKL 236 (554)
Q Consensus 229 ~~fl~~~~ 236 (554)
.+++.+.+
T Consensus 77 ~~~l~~~l 84 (85)
T 1nho_A 77 FEAINDEM 84 (85)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998765
No 140
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.44 E-value=3.9e-14 Score=124.87 Aligned_cols=103 Identities=19% Similarity=0.377 Sum_probs=82.9
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHHH---HHHHHHhCCCCEEEEEEEe----cCcHHHHHHhCCcCCCC
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHV----HNEQGLARRLGVGSQLP 205 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~----~~~~~l~~~~~v~~~~P 205 (554)
+.++|+..+.. ..+++++|.||++||++|+.+.|.+ .++++.++ ++.++.||+ +.+..++++|+|.+ +|
T Consensus 18 ~~~~~~~~l~~-~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~~~~l~~~~~v~~-~P 93 (134)
T 2fwh_A 18 TVDELNQALVE-AKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQDVALLKHLNVLG-LP 93 (134)
T ss_dssp SHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHHHHHHHHHTTCCS-SS
T ss_pred CHHHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcchHHHHHHHcCCCC-CC
Confidence 45666666532 1378999999999999999999999 89999886 489999999 56789999999997 99
Q ss_pred cceec-cCCeEE--EEeCCcccHHHHHHHHHHhCCCC
Q psy16770 206 QIALL-TDGRTS--FFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 206 ti~~~-~~g~~~--~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
|++++ ++|+.+ ....|..+.++|.+++.+.-+.+
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~~~ 130 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQPHH 130 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC----
T ss_pred EEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCccc
Confidence 99999 899886 34556678899999998776543
No 141
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.44 E-value=9.3e-14 Score=120.55 Aligned_cols=102 Identities=17% Similarity=0.309 Sum_probs=85.8
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcc-------cccccccchHHHHHHHHHhCCCCEEEEEEEe-------cCcHHH
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSD-------WCFACLQVEPIFKKLMDELSPLGVGFFTVHV-------HNEQGL 194 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~-------wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~-------~~~~~l 194 (554)
+...+.++|++.+... .+++++|.|||+ ||++|+.+.|.++++++.+.+ ++.++.||+ +.+..+
T Consensus 7 v~~~~~~~~~~~~~~~-~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQH-NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTT-TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHh-CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchhHHH
Confidence 4556788999888532 478999999999 999999999999999999876 599999999 789999
Q ss_pred HHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHH
Q psy16770 195 ARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRL 234 (554)
Q Consensus 195 ~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~ 234 (554)
+++|+|.+ +||+++|.+|.......+ .+.+.|.+|+.+
T Consensus 85 ~~~~~i~~-~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTA-VPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCS-SSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHCCCCe-eCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 99999997 999999988766554444 366888888764
No 142
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.41 E-value=1.9e-11 Score=131.12 Aligned_cols=309 Identities=13% Similarity=0.115 Sum_probs=202.3
Q ss_pred cccc-ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~L-t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..+ +.+++++.+ +.++.++|.||.++|..| .+.|.++|..+.+ .+.|+.+ .+..+++++++.. .| +
T Consensus 112 ~~~i~~~~~~~~~~---~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~-~~~F~~~---~~~~~~~~~~v~~-~~-i 179 (481)
T 3f8u_A 112 SVPLRTEEEFKKFI---SDKDASIVGFFDDSFSEA---HSEFLKAASNLRD-NYRFAHT---NVESLVNEYDDNG-EG-I 179 (481)
T ss_dssp EEEECSHHHHHHHT---TSSSCEEEEEESCTTCHH---HHHHHHHHHHHTT-TSCEEEE---CCHHHHHHHCSSS-EE-E
T ss_pred ceecCCHHHHHHHH---hcCCcEEEEEECCCccch---HHHHHHHHHHhcc-CceEEEE---CCHHHHHHhCCCC-Cc-E
Confidence 4444 566777777 456788999999886654 6789999999976 4788865 4778999999986 55 7
Q ss_pred eecc--------CCeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecC--Cchh---
Q psy16770 208 ALLT--------DGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRS--LPVR--- 274 (554)
Q Consensus 208 ~~~~--------~g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~--~~~~--- 274 (554)
++|+ ++....|.||..+.+.|.+|+....-|. +..+|.+++..+.. ....++++... ....
T Consensus 180 ~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~-v~e~t~~n~~~~~~-----~~~~v~~~~~~~~~~~~~~~ 253 (481)
T 3f8u_A 180 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGI-CPHMTEDNKDLIQG-----KDLLIAYYDVDYEKNAKGSN 253 (481)
T ss_dssp EEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTT-SCEECTTTHHHHTT-----SSEEEEEECCCTTTCHHHHH
T ss_pred EEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCC-ccccChhHHHHhcC-----CCceEEEEecccccchhhHH
Confidence 7777 4566778767778999999999988776 67788888887762 22333333221 1111
Q ss_pred -HHHH--HHhhccCCc---eEEEEEEccCCCChhHHhHhCCCC---CCceEEEEeCCCCCCCceeecCCCChh--HHHhH
Q psy16770 275 -LRYL--INAFKHRTT---IVFGVIVYDQEDSSSVFQRFKVPG---DKDSLLIFKEDKDRPSASITMNSIPVP--TLQDI 343 (554)
Q Consensus 275 -~~~~--~~a~~~~~~---v~Fg~v~~~~~~~~~l~~k~~i~~---~~Ptlvvfk~~~~~~~~~i~~~~~~~~--~l~~f 343 (554)
++.. ..|..+++. +.|+.++.. .....++.||++. ..|.++++..+.. .+...+.++.+ .|.+|
T Consensus 254 ~~~~~~~~vA~~~~~k~~~i~F~~~D~~--~~~~~l~~~gl~~~~~~~P~~~i~~~~~~---ky~~~~~~t~e~~~l~~f 328 (481)
T 3f8u_A 254 YWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKGE---KFVMQEEFSRDGKALERF 328 (481)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCTTCSCEEEEECSSSC---EEECCSCCCTTSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEEcHH--HHHHHHHHcCCCcccCCCcEEEEEcCCCc---ccCCCcccCccHHHHHHH
Confidence 1111 123355555 999999876 5677888999972 4899999863222 23444677777 89999
Q ss_pred HhcCC------------C-----cccccccchhhhhhcCCCCceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCC-ceE
Q psy16770 344 TDNNP------------Y-----LTLPRISSQSMLDAVCPVKKLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHN-NIA 404 (554)
Q Consensus 344 i~~~~------------~-----~~v~~lt~~~~~~~~c~~~~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~-~v~ 404 (554)
++... . ..+..++..++.+..-..++..+|.|. +....+....+.+.++++. +++. .+.
T Consensus 329 ~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~--~~~~~~v~ 406 (481)
T 3f8u_A 329 LQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEK--LSKDPNIV 406 (481)
T ss_dssp HHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHH--TTTCSSEE
T ss_pred HHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHH--hccCCCEE
Confidence 86521 1 123344545554444323455555555 5556777788899999998 7653 699
Q ss_pred EEEEecccchHHHHhhCCCCCCccccceEEEEEEecCCCe-eEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 405 FMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKI-KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 405 F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
|+.+|++.. +++..+ . ..++|.+......+. .-..+.| ..+.+.|.+||++.......
T Consensus 407 ~~~id~~~~-~~~~~~-------~-v~~~Pt~~~~~~~~~~~~~~~~G---------~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 407 IAKMDATAN-DVPSPY-------E-VRGFPTIYFSPANKKLNPKKYEG---------GRELSDFISYLQREATNPPV 465 (481)
T ss_dssp EEEEETTSS-CCCTTC-------C-CCSSSEEEEECTTCTTSCEECCS---------CCSHHHHHHHHHHHCSSCCC
T ss_pred EEEEECCch-hhHhhC-------C-CcccCEEEEEeCCCeEeeeEeCC---------CCCHHHHHHHHHHhcCCccc
Confidence 999999764 444433 1 124554433333322 1222344 35789999999998776654
No 143
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.41 E-value=2.1e-14 Score=151.07 Aligned_cols=106 Identities=19% Similarity=0.242 Sum_probs=84.4
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCC-------CEEEEEEEecCcHHHHHHhC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-------GVGFFTVHVHNEQGLARRLG 199 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~-------~v~~~~Vd~~~~~~l~~~~~ 199 (554)
..++.||.++|+..+.. +.+++++|+|||+||++|+.+.|.|+++++.+... .+.|++|||+.++++|++|+
T Consensus 23 ~~V~~Lt~~~F~~~l~~-~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 23 SSVVDLSGDDFSRVHRV-APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp TTEEECSCSCGGGTCTT-GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCcEECCHHHHHHHHHh-CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 35888999999988853 34579999999999999999999999999999732 39999999999999999999
Q ss_pred CcCCCCcceeccCCe---EEEEeCCcccHHHHHHHHHHhC
Q psy16770 200 VGSQLPQIALLTDGR---TSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 200 v~~~~Pti~~~~~g~---~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
|.+ +||+++|.+|. ...|.|+ ++.+.| .|+.+++
T Consensus 102 V~~-~PTlilf~~gg~~~~~~y~G~-r~~e~L-~fI~k~l 138 (470)
T 3qcp_A 102 INF-VPRLFFFYPRDSCRSNEECGT-SSLEHV-AFENSHL 138 (470)
T ss_dssp CCS-SCEEEEEEESSCCCTTSCCCC-CCEEEE-ECSCTTC
T ss_pred CCc-cCeEEEEECCCceEEEEeeCC-CCHHHH-HHHHHhc
Confidence 997 99999996443 3344443 354554 4444443
No 144
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.39 E-value=1.2e-13 Score=149.18 Aligned_cols=107 Identities=17% Similarity=0.340 Sum_probs=91.0
Q ss_pred ccccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhC--CCCEEEEEEEecCcHHHHHHhCCcCCC
Q psy16770 127 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS--PLGVGFFTVHVHNEQGLARRLGVGSQL 204 (554)
Q Consensus 127 ~~~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~--~~~v~~~~Vd~~~~~~l~~~~~v~~~~ 204 (554)
..+..|+.++|+..+. +.+++++|.||||||++|+.+.|.|+++++.+. ..++.+++|||+.+... . ++|.+ +
T Consensus 358 ~~v~~l~~~~f~~~v~--~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~-~ 432 (504)
T 2b5e_A 358 SSVFQLVGKNHDEIVN--DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEG-Y 432 (504)
T ss_dssp CSEEEECTTTHHHHHH--CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSS-S
T ss_pred ccceecccccHHHhhc--cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCcee-c
Confidence 4578899999999885 457899999999999999999999999999886 23599999999987654 4 99998 9
Q ss_pred CcceeccCCeE---EEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 205 PQIALLTDGRT---SFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 205 Pti~~~~~g~~---~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
||+++|++|+. ..|. |.++.++|.+|+.+.+...
T Consensus 433 Pt~~~~~~G~~~~~~~~~-G~~~~~~l~~~i~~~~~~~ 469 (504)
T 2b5e_A 433 PTIVLYPGGKKSESVVYQ-GSRSLDSLFDFIKENGHFD 469 (504)
T ss_dssp SEEEEECCTTSCCCCBCC-SCCCHHHHHHHHHHHCTTC
T ss_pred CeEEEEeCCceecceEec-CCCCHHHHHHHHHhcCCCC
Confidence 99999998864 4455 5568999999999997655
No 145
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.38 E-value=4.7e-13 Score=128.99 Aligned_cols=100 Identities=13% Similarity=0.139 Sum_probs=85.0
Q ss_pred cccccccccccccccCCCCCCcE-EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLSTTHWNFEKNYIPKSYTTPH-LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~Lt~~~F~~~v~~~~~~~~~-lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
.+..|+.++|+..+ +.++++ +|.||++||++|+.+.|.|+++++.+ + ++.++.||++.++++|++|+|.+ +||
T Consensus 119 ~~~~l~~~~~~~~~---~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt 192 (229)
T 2ywm_A 119 RKPQLSEKTLELLQ---VVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-D-YITSKVIDASENQDLAEQFQVVG-VPK 192 (229)
T ss_dssp TCCSCCHHHHHHHT---TCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-T-TEEEEEEEGGGCHHHHHHTTCCS-SSE
T ss_pred CccCCCHHHHHHHH---hcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-C-CeEEEEEECCCCHHHHHHcCCcc-cCE
Confidence 46778889998876 234455 88999999999999999999999998 3 59999999999999999999997 999
Q ss_pred ceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 207 IALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 207 i~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+++ +|+...+.| .++.+.|.+|+.+.+
T Consensus 193 ~~~--~G~~~~~~G-~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 193 IVI--NKGVAEFVG-AQPENAFLGYIMAVY 219 (229)
T ss_dssp EEE--GGGTEEEES-CCCHHHHHHHHHHHH
T ss_pred EEE--CCEEEEeeC-CCCHHHHHHHHHHHh
Confidence 998 888544654 568899999998765
No 146
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.37 E-value=1.5e-13 Score=116.10 Aligned_cols=76 Identities=17% Similarity=0.322 Sum_probs=63.3
Q ss_pred CCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec------CcHHHHHHhCCcCCCCcceeccCCeEEEEeC
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------NEQGLARRLGVGSQLPQIALLTDGRTSFFKE 220 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~------~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~ 220 (554)
+++.+|+|||+||++|+++.|.|+++++.+. .|||+ .++++|++|+|.+ +||+++ +|+. +.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~~~~~~l~~~~~V~~-~PT~~i--~G~~--~~- 78 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQAQECTEAGITS-YPTWII--NGRT--YT- 78 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTTSCCCHHHHHTTCCS-SSEEEE--TTEE--EE-
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEecccccchhHHHHHHcCCeE-eCEEEE--CCEE--ec-
Confidence 3466899999999999999999999997764 67777 6889999999998 999877 8874 55
Q ss_pred CcccHHHHHHHHHHh
Q psy16770 221 PSFSVQKMVEFFRLK 235 (554)
Q Consensus 221 g~~~~~~i~~fl~~~ 235 (554)
|.++.+.|.+|+.-.
T Consensus 79 G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 79 GVRSLEALAVASGYP 93 (106)
T ss_dssp SCCCHHHHHHHHTCC
T ss_pred CCCCHHHHHHHhCCc
Confidence 556889999988543
No 147
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.37 E-value=1.4e-12 Score=127.19 Aligned_cols=88 Identities=16% Similarity=0.156 Sum_probs=76.7
Q ss_pred CCcEEEEEEcccccccccchHHHHHHHHHhC---CCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcc
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIFKKLMDELS---PLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 223 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~---~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~ 223 (554)
++++++.||||||++|+.+.|.|++++..+. ..++.++.||++.+++++++|+|.+ +||+++ +|+.. +.|. +
T Consensus 138 ~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~-vPt~~i--~G~~~-~~G~-~ 212 (243)
T 2hls_A 138 GRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMS-VPSIAI--NGYLV-FVGV-P 212 (243)
T ss_dssp SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCS-SSEEEE--TTEEE-EESC-C
T ss_pred CCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCee-eCeEEE--CCEEE-EeCC-C
Confidence 5577999999999999999999999999982 1369999999999999999999997 999988 88764 6655 5
Q ss_pred cHHHHHHHHHHhCCCC
Q psy16770 224 SVQKMVEFFRLKLPYK 239 (554)
Q Consensus 224 ~~~~i~~fl~~~~~~~ 239 (554)
+.++|++++.+.++..
T Consensus 213 ~~~~l~~~l~~~~~~~ 228 (243)
T 2hls_A 213 YEEDFLDYVKSAAEGR 228 (243)
T ss_dssp CHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhhcc
Confidence 8899999999987654
No 148
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.35 E-value=2.2e-12 Score=101.52 Aligned_cols=73 Identities=22% Similarity=0.378 Sum_probs=63.9
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcc-cHHHHH
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF-SVQKMV 229 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~-~~~~i~ 229 (554)
.|.||++||++|+.+.|.++++++.+.+ ++.++.|| +.+++++|||.+ +||+++ +|+.+.. |.. +.++|.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~---~~~~~~~~~v~~-~Pt~~~--~G~~~~~--G~~~~~~~l~ 73 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIK---EMDQILEAGLTA-LPGLAV--DGELKIM--GRVASKEEIK 73 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC---SHHHHHHHTCSS-SSCEEE--TTEEEEC--SSCCCHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEec---CHHHHHHCCCCc-CCEEEE--CCEEEEc--CCCCCHHHHH
Confidence 5889999999999999999999999875 58999998 889999999997 999998 8887665 544 778888
Q ss_pred HHH
Q psy16770 230 EFF 232 (554)
Q Consensus 230 ~fl 232 (554)
+++
T Consensus 74 ~~l 76 (77)
T 1ilo_A 74 KIL 76 (77)
T ss_dssp HHC
T ss_pred HHh
Confidence 775
No 149
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.03 E-value=7.7e-14 Score=121.90 Aligned_cols=92 Identities=21% Similarity=0.171 Sum_probs=78.4
Q ss_pred CCCCcEEEEEEcccccccccchHHH---HHHHHHhCCCCEEEEEEEec--CcHHHHHHhCCcCCCCcceec--cCCeE--
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQLPQIALL--TDGRT-- 215 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~~--~~~~l~~~~~v~~~~Pti~~~--~~g~~-- 215 (554)
..+++++|.||++||++|+.+.|.+ +++++.+++ ++.++.||++ .+..++++|+|.+ +||+++| ++|+.
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~-~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEGQELARRYRVPG-TPTFVFLVPKAGAWEE 94 (130)
Confidence 4578999999999999999999999 888888775 4899999994 5689999999997 9999999 67887
Q ss_pred EEEeCCcccHHHHHHHHHHhCCC
Q psy16770 216 SFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 216 ~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
+....|..+.+.|.+++.+.+..
T Consensus 95 ~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 95 VGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 66555666888999999877643
No 150
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.34 E-value=4.5e-13 Score=112.63 Aligned_cols=94 Identities=17% Similarity=0.209 Sum_probs=77.6
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHH----HHHHhCCcCCCCcce
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG----LARRLGVGSQLPQIA 208 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~----l~~~~~v~~~~Pti~ 208 (554)
|.++|++.+. .+++++|.|+|+|||.|+.+.|.++++++. + ++.+.+||.++++. +++++||++..||++
T Consensus 13 s~e~f~~ii~---~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~-~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~i 86 (112)
T 3iv4_A 13 SIDQFEQVIE---ENKYVFVLKHSETCPISANAYDQFNKFLYE--R-DMDGYYLIVQQERDLSDYIAKKTNVKHESPQAF 86 (112)
T ss_dssp SHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H-TCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEE
T ss_pred CHHHHHHHHh---cCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C-CceEEEEEeecCchhhHHHHHHhCCccCCCeEE
Confidence 4677888773 488999999999999999999999999985 2 58999999999976 799999993289999
Q ss_pred eccCCeEEEE-eCCcccHHHHHHHH
Q psy16770 209 LLTDGRTSFF-KEPSFSVQKMVEFF 232 (554)
Q Consensus 209 ~~~~g~~~~y-~~g~~~~~~i~~fl 232 (554)
+|++|+.+.. .-+..+.+.|.+.+
T Consensus 87 l~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 87 YFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEECCEEEEEeeccccCHHHHHHhh
Confidence 9999998654 33445777776654
No 151
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.33 E-value=3.4e-13 Score=118.78 Aligned_cols=105 Identities=13% Similarity=0.103 Sum_probs=89.1
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCC--CCc
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQ--LPQ 206 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~--~Pt 206 (554)
+.++|.++|++.+ +++.+++|.|||+ |++|+.+.|.++++|+++++ .+.|++||.++++.++++|||+ + +||
T Consensus 8 v~~~t~~~f~~~~---~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~~~~a~~~gi~-~~~iPt 81 (133)
T 2djk_A 8 IGEIGPETYSDYM---SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAFGAHAGNLNLK-TDKFPA 81 (133)
T ss_dssp SEECCHHHHHHHH---HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTTGGGTTTTTCC-SSSSSE
T ss_pred eeccChHHHHHHh---cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHhHHHHHHcCCC-cccCCE
Confidence 6788999998775 4678999999999 89999999999999999987 4999999999999999999999 5 999
Q ss_pred ceeccC--CeEEEEe-CCcccHHHHHHHHHHhCCCC
Q psy16770 207 IALLTD--GRTSFFK-EPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 207 i~~~~~--g~~~~y~-~g~~~~~~i~~fl~~~~~~~ 239 (554)
+++|++ |+..... .|..+.+.|.+|+.+.+...
T Consensus 82 l~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 82 FAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp EEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTC
T ss_pred EEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCC
Confidence 999986 7664332 15668899999998776433
No 152
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.30 E-value=5.5e-13 Score=122.59 Aligned_cols=105 Identities=16% Similarity=0.272 Sum_probs=81.3
Q ss_pred ccccccccccccc-CCCCCCcEEEEEEcccccccccchHHH---HHHHHHhCCCCEEEEEEEecCcHHH-----------
Q psy16770 130 LSTTHWNFEKNYI-PKSYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNEQGL----------- 194 (554)
Q Consensus 130 ~~Lt~~~F~~~v~-~~~~~~~~lV~Fya~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~~~~~~l----------- 194 (554)
..++..+|++.+. .+..+++++|.|||+||++|+.+++.+ .++.+.+++ ++.++.||++.+..+
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcch
Confidence 4556777777652 123578999999999999999985544 555555543 589999999887655
Q ss_pred ---------------HHHhCCcCCCCcceec-cCCeEEEEeCCccc-HHHHHHHHHHhC
Q psy16770 195 ---------------ARRLGVGSQLPQIALL-TDGRTSFFKEPSFS-VQKMVEFFRLKL 236 (554)
Q Consensus 195 ---------------~~~~~v~~~~Pti~~~-~~g~~~~y~~g~~~-~~~i~~fl~~~~ 236 (554)
+++|+|.+ +||++++ ++|+.+....|..+ .+.+.+++.+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~-~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANA-QPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCC-SSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCC-cceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 89999998 9999999 88988766556666 899999998764
No 153
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.30 E-value=3.1e-12 Score=115.52 Aligned_cols=89 Identities=17% Similarity=0.300 Sum_probs=76.2
Q ss_pred CCCcEEEEEE-cccccccccchHHH---HHHHHHhCCCCEEEEEEEecCc-----------HHHHHHhCCcCCCCcceec
Q psy16770 146 YTTPHLILFY-SDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNE-----------QGLARRLGVGSQLPQIALL 210 (554)
Q Consensus 146 ~~~~~lV~Fy-a~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~~~~-----------~~l~~~~~v~~~~Pti~~~ 210 (554)
.+++++|.|| ++||++|+.+.|.+ .++.+.+.. ++.++.||++.. ..++++|+|.+ +||++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~-~Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG-FPELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS-SSEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHHHHcCCCC-CCEEEEE
Confidence 4679999999 99999999999999 777666533 589999999875 48999999998 9999999
Q ss_pred -cCCeEEEEeCCcc--cHHHHHHHHHHhCC
Q psy16770 211 -TDGRTSFFKEPSF--SVQKMVEFFRLKLP 237 (554)
Q Consensus 211 -~~g~~~~y~~g~~--~~~~i~~fl~~~~~ 237 (554)
++|+.+... |.. +.+.+.+++.+.+.
T Consensus 124 d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 124 DAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 899988877 776 78999999987654
No 154
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.29 E-value=7.9e-12 Score=109.29 Aligned_cols=87 Identities=17% Similarity=0.361 Sum_probs=77.0
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------cHHHHHHhCCcCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQ 203 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------~~~l~~~~~v~~~ 203 (554)
.+++++|.||++||++|+...|.++++++.+. ++.+..|+++. +..++++|+|.+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~- 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW- 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC-
Confidence 45799999999999999999999999999997 69999999987 678999999997
Q ss_pred CCcceec-cCCeEEEEeC---CcccHHHHHHHHHHhC
Q psy16770 204 LPQIALL-TDGRTSFFKE---PSFSVQKMVEFFRLKL 236 (554)
Q Consensus 204 ~Pti~~~-~~g~~~~y~~---g~~~~~~i~~fl~~~~ 236 (554)
+|+++++ ++|+.. ... |..+.+.|.+++++.+
T Consensus 100 ~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 100 QPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999 789888 666 6678899999998764
No 155
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.29 E-value=2.2e-13 Score=116.03 Aligned_cols=90 Identities=12% Similarity=0.078 Sum_probs=69.7
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhC-CCCEEEEEEEecCc--HHHHHHhCCcCCCCcceeccCCeEEEEeCCc
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELS-PLGVGFFTVHVHNE--QGLARRLGVGSQLPQIALLTDGRTSFFKEPS 222 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~-~~~v~~~~Vd~~~~--~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~ 222 (554)
+...+||+|||+||++|+.+.|......+... ...+.+.+||.+.+ ..++.+++|.+ .||+++|++|+.+....|.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g-~PT~i~f~~G~ev~Ri~G~ 95 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTF-TPTFVLMAGDVESGRLEGY 95 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCS-SSEEEEEETTEEEEEEECC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCC-CCEEEEEECCEEEeeecCC
Confidence 45689999999999999999764432221110 01257788888876 58999999998 9999999999998888888
Q ss_pred ccHHHHHHHHHHhC
Q psy16770 223 FSVQKMVEFFRLKL 236 (554)
Q Consensus 223 ~~~~~i~~fl~~~~ 236 (554)
...+.+..|+.+.+
T Consensus 96 ~~~~~f~~~L~~~l 109 (116)
T 3dml_A 96 PGEDFFWPMLARLI 109 (116)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 89999999998654
No 156
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.26 E-value=1.1e-11 Score=109.53 Aligned_cols=86 Identities=21% Similarity=0.406 Sum_probs=76.1
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------------------------cHHHHHHhCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 200 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------------------------~~~l~~~~~v 200 (554)
.+++++|.||++||++|+.+.|.++++++.+...++.+..|+++. +..++++|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 567999999999999999999999999999985579999999964 6689999999
Q ss_pred cCCCCcceec-cCCeEEEEeCCcccHHHHHHHH
Q psy16770 201 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFF 232 (554)
Q Consensus 201 ~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl 232 (554)
.+ +|+++++ ++|+.+....|..+.+.|.+++
T Consensus 113 ~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 IT-IPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CE-ESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred Cc-cCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 97 9999999 8898876666667889998876
No 157
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.25 E-value=1.7e-11 Score=109.58 Aligned_cols=93 Identities=17% Similarity=0.376 Sum_probs=80.6
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------cHHHHHHhCCcCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQ 203 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------~~~l~~~~~v~~~ 203 (554)
.+++++|.||++||++|+.+.|.+.++++.+.+.++.+..|+++. +..++++|+|.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP- 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC-
Confidence 457999999999999999999999999999986679999999976 358999999997
Q ss_pred CCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 204 LPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 204 ~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+|+++++ ++|+.+....|..+.+.|.+++.+.+...
T Consensus 104 ~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 9999888 88988776656668899999999887654
No 158
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.25 E-value=1.9e-11 Score=106.64 Aligned_cols=88 Identities=17% Similarity=0.365 Sum_probs=76.0
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------------------cHHHHHHhCCcC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARRLGVGS 202 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------------------~~~l~~~~~v~~ 202 (554)
.+++++|.||++||++|+.+.|.++++++.+. ++.++.|+++. +..++++|+|.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 101 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC
Confidence 45799999999999999999999999999987 68999999843 678999999997
Q ss_pred CCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 203 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 203 ~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+|+++++ ++|+.. ...|..+.+.|.+++.+.+.
T Consensus 102 -~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 102 -QPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp -SSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred -CceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 9999999 688887 55555688999999988764
No 159
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.25 E-value=2.9e-11 Score=108.11 Aligned_cols=93 Identities=19% Similarity=0.295 Sum_probs=81.6
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcH-----------------------HHHHHhCCcC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ-----------------------GLARRLGVGS 202 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~-----------------------~l~~~~~v~~ 202 (554)
.+++++|.||++||++|+...|.++++++.+.+.++.++.|+++.+. .++++|+|.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 46799999999999999999999999999998767999999998865 7999999997
Q ss_pred CCCcceecc-CCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 203 QLPQIALLT-DGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 203 ~~Pti~~~~-~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
+|+++++. +|+.+....|..+.+.|.+++.+.....
T Consensus 109 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 109 -IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp -SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred -CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 99999995 8988877767678899999998876543
No 160
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.24 E-value=2e-11 Score=108.26 Aligned_cols=90 Identities=18% Similarity=0.333 Sum_probs=78.1
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe---------------------------cCcHHHHHHh
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------------------------HNEQGLARRL 198 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~---------------------------~~~~~l~~~~ 198 (554)
.+++++|.||++||++|+.+.|.++++++.+.+. +.+..|++ +.+..++++|
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence 4679999999999999999999999999999875 89999995 4567899999
Q ss_pred CCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 199 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 199 ~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+|.+ +|+++++ ++|+.+....|..+.+.+.+++.+.+.
T Consensus 107 ~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 107 ENEY-VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp CCCC-SSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred CCCC-CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 9997 9999999 889887766565688999999987754
No 161
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.23 E-value=3.4e-11 Score=106.84 Aligned_cols=89 Identities=9% Similarity=0.177 Sum_probs=77.6
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHH-------------------------HHHHhCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-------------------------LARRLGV 200 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~-------------------------l~~~~~v 200 (554)
.+++++|.||++||++|+...|.+.++++.+.+.++.+..|+++.+.+ +++.|+|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 457999999999999999999999999999987679999999998776 9999999
Q ss_pred cCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 201 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 201 ~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
.+ +|+++++ ++|+......|..+.+.+++.+.+.
T Consensus 110 ~~-~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 110 YA-TPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp CS-SCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred CC-CCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 97 9999999 8899877776766777777766554
No 162
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.23 E-value=3.5e-11 Score=109.00 Aligned_cols=92 Identities=15% Similarity=0.306 Sum_probs=81.1
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHh---------------------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRL--------------------------- 198 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~--------------------------- 198 (554)
.+++++|.||++||++|+...|.++++++.+.+.++.++.|+++.+...++++
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 45799999999999999999999999999998777999999999988777777
Q ss_pred CCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 199 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 199 ~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
++.+ +|+++++ ++|+++....|..+.+.+.+++++.+..
T Consensus 113 ~i~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 113 GITG-IPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp CSCS-SSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred CCCC-CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 9997 9998888 8999887776767889999999988653
No 163
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.23 E-value=2.5e-11 Score=108.73 Aligned_cols=92 Identities=13% Similarity=0.264 Sum_probs=79.6
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC------------------------cHHHHHHhC--
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN------------------------EQGLARRLG-- 199 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~------------------------~~~l~~~~~-- 199 (554)
.+++++|.||++||++|+...|.+.++++++++.++.++.|+++. ...++++||
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 457999999999999999999999999999977689999999873 456788899
Q ss_pred CcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 200 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 200 v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
+.+ +|+++++ ++|+.+....|..+.+.|.+++++....
T Consensus 103 v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 103 VGV-LPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp SCC-SSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred cCC-CCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 997 9999888 8899877777777889999999877544
No 164
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.21 E-value=2.5e-10 Score=118.04 Aligned_cols=204 Identities=12% Similarity=0.108 Sum_probs=143.8
Q ss_pred cccccc-cccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 128 HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 128 ~~~~Lt-~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
.+..++ .+++++.+. ..+++++|.||++||. ...+.|.++|..+.+ .+.|+.++ +..+|++++|+ .|+
T Consensus 126 ~v~~i~~~~~~~~~~~--~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~-~~~F~~~~---~~~~~~~~~v~--~p~ 194 (367)
T 3us3_A 126 PVELIEGERELQAFEN--IEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHP-YIPFFATF---DSKVAKKLTLK--LNE 194 (367)
T ss_dssp SEEECCSHHHHHHHHH--CCSSCEEEEECSCTTC---HHHHHHHHHHHHHTT-TSCEEEEC---CHHHHHHHTCC--TTC
T ss_pred CcEEcCCHHHHHHHhc--cCCCcEEEEEECCCCc---hHHHHHHHHHHhhcC-CcEEEEEC---CHHHHHHcCCC--CCe
Confidence 344554 577877763 1457899999999865 567899999999986 48888775 56899999997 499
Q ss_pred ceeccC--CeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchh---HH-HHH-
Q psy16770 207 IALLTD--GRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR---LR-YLI- 279 (554)
Q Consensus 207 i~~~~~--g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~---~~-~~~- 279 (554)
|++|+. +..+.|.|+.++.++|.+|+.....|. +..+|.+++.+.+.+ ...++.+++|.+...+. .. .+.
T Consensus 195 i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~-v~elt~~~~~~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~l~~ 271 (367)
T 3us3_A 195 IDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRST-LRKLKPESMYETWED--DMDGIHIVAFAEEADPDGYEFLEILKS 271 (367)
T ss_dssp EEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCS-EEECCGGGHHHHHHS--CBTTEEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccc-eeecChhhHHHHHhh--ccCCcEEEEEEcCCChhHHHHHHHHHH
Confidence 999976 456778776678999999999998877 788899988776643 12445666675544321 21 122
Q ss_pred HhhccCC--ceEEEEEEccCCCChhH----HhHhCCCCCCceEEEEeCCCCCCCceeec---CCCChhHHHhHHhcC
Q psy16770 280 NAFKHRT--TIVFGVIVYDQEDSSSV----FQRFKVPGDKDSLLIFKEDKDRPSASITM---NSIPVPTLQDITDNN 347 (554)
Q Consensus 280 ~a~~~~~--~v~Fg~v~~~~~~~~~l----~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~---~~~~~~~l~~fi~~~ 347 (554)
.|-++++ ++.|++++++. .... .+.||++...|++++++........+... +.++.+.|.+|++..
T Consensus 272 vA~~~~~~~ki~F~~id~~~--~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 272 VAQDNTDNPDLSIIWIDPDD--FPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp HHHHTTTCTTCCEEEECGGG--CTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred HHHHcCCCCceEEEEECCcc--chhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 2236676 69999998873 3322 45699985699999998643311112122 468999999999743
No 165
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.20 E-value=5.8e-11 Score=105.32 Aligned_cols=88 Identities=16% Similarity=0.246 Sum_probs=75.9
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHh-CCCCEEEEEEEecC-------------------------cHHHHHHhC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDEL-SPLGVGFFTVHVHN-------------------------EQGLARRLG 199 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l-~~~~v~~~~Vd~~~-------------------------~~~l~~~~~ 199 (554)
.+++++|.||++||++|+...|.+.++++.+ .+.++.+..|+++. +..++++|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4579999999999999999999999999999 77679999999887 448999999
Q ss_pred CcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 200 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 200 v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
|.+ +|+++++ ++|+.+.... +.+.+.+++.+.+.
T Consensus 112 v~~-~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 112 ILT-LPTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp CCS-SSEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred CCC-cCEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 997 9999999 7888776654 66888888887653
No 166
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.20 E-value=1.2e-11 Score=112.06 Aligned_cols=92 Identities=23% Similarity=0.356 Sum_probs=76.2
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEE----------------------------EecCcHHHHHH
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTV----------------------------HVHNEQGLARR 197 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~V----------------------------d~~~~~~l~~~ 197 (554)
.+++++|.||++||++|+.+.|.+++++++++..++.+..| +++.+..++++
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 56799999999999999999999999999875445555444 44556789999
Q ss_pred hCCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 198 LGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 198 ~~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
|+|.+ +||++++ ++|+.+....|..+.+.|.+++.+.+..
T Consensus 117 ~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 117 LNISV-YPSWALIGKDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp TTCCS-SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred cCCCc-cceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 99997 9999998 8899877666667889999999887653
No 167
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.19 E-value=4.3e-10 Score=115.49 Aligned_cols=202 Identities=14% Similarity=0.167 Sum_probs=141.2
Q ss_pred cccc-ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~L-t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..| +.+++++.+. ..+++++|.||++||. ...+.|.++|+.+++ .+.|+.++ ++.+|++++++ +|++
T Consensus 125 ~~~l~~~~~~~~~~~--~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~-~~~f~~~~---~~~~~~~~~v~--~p~i 193 (350)
T 1sji_A 125 VEIINSKLEVQAFER--IEDQIKLIGFFKSEES---EYYKAFEEAAEHFQP-YIKFFATF---DKGVAKKLSLK--MNEV 193 (350)
T ss_dssp EEECCSHHHHHHHHH--CCSSCEEEEECSCTTS---HHHHHHHHHHHHTTT-TSEEEEEC---CHHHHHHHTCC--TTCE
T ss_pred ceeccchHHHHHHhc--cCCCcEEEEEECCCCc---HHHHHHHHHHHhhcc-CcEEEEEC---CHHHHHHcCCC--CCcE
Confidence 4456 3567777662 0345789999999864 457899999999976 48898874 57899999996 8999
Q ss_pred eeccC--CeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchh---HHH-HH-H
Q psy16770 208 ALLTD--GRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR---LRY-LI-N 280 (554)
Q Consensus 208 ~~~~~--g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~---~~~-~~-~ 280 (554)
++|++ +....|.|+.++.++|.+|+....-|. +..+|.+++.++..+ ...+..+++|.....+. ... +. .
T Consensus 194 ~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~-v~elt~~~~~~~~~~--~~~~~~~l~f~~~~~~~~~~~~~~~~~v 270 (350)
T 1sji_A 194 DFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPT-LRRLRPEDMFETWED--DLNGIHIVAFAERSDPDGYEFLEILKQV 270 (350)
T ss_dssp EEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCS-EEECCTTTHHHHHHS--CSSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEeCCCCCceecCCCCCCHHHHHHHHHHcCccc-hhhcChhhHHHHhcC--CCCCcEEEEEEcCCCccHHHHHHHHHHH
Confidence 99975 355677766468999999999988877 788899998887642 11244555565543322 221 11 2
Q ss_pred hhccCC--ceEEEEEEccCCCChhHH----hHhCCCCCCceEEEEeCCCCCCCce-ee--cCCCChhHHHhHHhc
Q psy16770 281 AFKHRT--TIVFGVIVYDQEDSSSVF----QRFKVPGDKDSLLIFKEDKDRPSAS-IT--MNSIPVPTLQDITDN 346 (554)
Q Consensus 281 a~~~~~--~v~Fg~v~~~~~~~~~l~----~k~~i~~~~Ptlvvfk~~~~~~~~~-i~--~~~~~~~~l~~fi~~ 346 (554)
|.++++ .+.|+.++++ ....++ +.||++.+.|++++++......... .. .+.++.+.|.+|++.
T Consensus 271 A~~~~~~~~~~f~~id~~--~~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d 343 (350)
T 1sji_A 271 ARDNTDNPDLSIVWIDPD--DFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIED 343 (350)
T ss_dssp HHHGGGCSSCCEEEECGG--GCHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHH
T ss_pred HHHhCCCCceEEEEECch--hhHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHH
Confidence 225554 8999999887 455666 7899985589999998632211111 11 247788899999975
No 168
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.16 E-value=2.1e-12 Score=118.05 Aligned_cols=90 Identities=19% Similarity=0.355 Sum_probs=73.4
Q ss_pred CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHH-HHHHhCC--cCCCCcceec-cCCeEEEEeC
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-LARRLGV--GSQLPQIALL-TDGRTSFFKE 220 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~-l~~~~~v--~~~~Pti~~~-~~g~~~~y~~ 220 (554)
..+++++|.|||+||++|+.+.|.++++++.... ++.|+.||++.+.. ++.++++ .+ +||+++| ++|+.+....
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~~~~~~~~~~~~~~~-~Pt~~~~d~~G~~~~~~~ 121 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDEEEPKDEDFSPDGGY-IPRILFLDPSGKVHPEII 121 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGGGSCSCGGGCTTCSC-SSEEEEECTTSCBCTTCC
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCCchHHHHHhcccCCc-CCeEEEECCCCCEEEEEe
Confidence 3578999999999999999999999997766543 36788899998877 8889988 76 9999999 8898765444
Q ss_pred C----------cccHHHHHHHHHHhC
Q psy16770 221 P----------SFSVQKMVEFFRLKL 236 (554)
Q Consensus 221 g----------~~~~~~i~~fl~~~~ 236 (554)
| ..+.+.|++++.+.+
T Consensus 122 G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 122 NENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp CTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCCCccchhcccCCHHHHHHHHHHHH
Confidence 4 257888988888764
No 169
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.16 E-value=1e-10 Score=105.26 Aligned_cols=92 Identities=13% Similarity=0.104 Sum_probs=77.6
Q ss_pred CCCcEEEEEEcccccccccc-hHHHHHHHHHhCCCCEEEEEEEec----------------------------CcH----
Q psy16770 146 YTTPHLILFYSDWCFACLQV-EPIFKKLMDELSPLGVGFFTVHVH----------------------------NEQ---- 192 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l-~p~~~~~a~~l~~~~v~~~~Vd~~----------------------------~~~---- 192 (554)
.+++++|.||++||++|+.. .|.++++++++++.++.+..|+++ .+.
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 35799999999999999996 999999999998668999999863 222
Q ss_pred -HHHHHhCCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 193 -GLARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 193 -~l~~~~~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
.+++.|+|.+ +|+++++ ++|+++....|..+.+.|.+.+.+.+..
T Consensus 107 ~~~~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 107 PRTMAAYQMRG-TPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp CHHHHHTTCCS-SSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCC-CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 5899999997 9999888 7898876665667889999999887643
No 170
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.15 E-value=9.1e-11 Score=105.77 Aligned_cols=92 Identities=13% Similarity=0.148 Sum_probs=78.0
Q ss_pred CCCcEEEEEEccccccccc-chHHHHHHHHHhCCCCEEEEEEEe----------------------------cCcHH---
Q psy16770 146 YTTPHLILFYSDWCFACLQ-VEPIFKKLMDELSPLGVGFFTVHV----------------------------HNEQG--- 193 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~-l~p~~~~~a~~l~~~~v~~~~Vd~----------------------------~~~~~--- 193 (554)
.+++++|.||++||++|+. +.|.++++++++++.++.+..|++ +....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 3579999999999999999 599999999999877899999986 23334
Q ss_pred ---HHHHhCCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 194 ---LARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 194 ---l~~~~~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
++++|||.+ +|+++++ ++|+++....|..+.+.+.+.+.+.+..
T Consensus 109 ~~~~~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 109 IPSTMKKYRLEG-TPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SCHHHHHTTCCS-SSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hhhHHHhcccCc-cceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 999999997 9999998 6898877666667889999999887653
No 171
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.15 E-value=1e-10 Score=104.45 Aligned_cols=93 Identities=16% Similarity=0.285 Sum_probs=77.9
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcH----------------------HHHHHhCCcCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ----------------------GLARRLGVGSQ 203 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~----------------------~l~~~~~v~~~ 203 (554)
.+++++|.||++||++|+...|.+.++++.+.+.++.+..|+++.+. .+++.|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG- 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS-
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC-
Confidence 45799999999999999999999999999998767999999998765 7889999997
Q ss_pred CCcceec-cCCeEEEEeCCc--ccHHHHHHHHHHhCCCC
Q psy16770 204 LPQIALL-TDGRTSFFKEPS--FSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 204 ~Pti~~~-~~g~~~~y~~g~--~~~~~i~~fl~~~~~~~ 239 (554)
+|+++++ ++|+.+....|. .+.+.|.+++.+.+...
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 9998888 889887655443 24589999999887654
No 172
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.15 E-value=7.6e-11 Score=105.43 Aligned_cols=92 Identities=14% Similarity=0.181 Sum_probs=77.9
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEE-----------------------ecCcHHHHHHhCCcC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH-----------------------VHNEQGLARRLGVGS 202 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd-----------------------~~~~~~l~~~~~v~~ 202 (554)
.+++++|.||++||++|+...|.++++++.+.+.++.+..|+ ++.+..+++.|+|.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 357899999999999999999999999999987678888766 455778999999997
Q ss_pred CCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 203 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 203 ~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
+|+++++ ++|+.+..+.|..+.+.|.+++.+.+..
T Consensus 107 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 107 -YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp -SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred -cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 9999998 7898866555666889999999887643
No 173
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.14 E-value=2e-11 Score=111.70 Aligned_cols=98 Identities=9% Similarity=-0.041 Sum_probs=75.8
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhC---CcCCCC
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG---VGSQLP 205 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~---v~~~~P 205 (554)
.+.++.+.+...- ...+++++|.|||+||++|+.+.|.++++++.+. ++.+..||.+++++++.+|+ +.+ +|
T Consensus 38 ~~~~~~~~~~~l~--~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~-iP 112 (167)
T 1z6n_A 38 SNGLPSALTERLQ--RIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIA-IP 112 (167)
T ss_dssp HHCCCHHHHHHHH--TCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCC-SS
T ss_pred ccCCCHHHHHHHH--HhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCC-cC
Confidence 4456655554432 1245789999999999999999999999998875 59999999999999999997 997 99
Q ss_pred cceeccC-CeEEEEeCCcccHHHHHHHHH
Q psy16770 206 QIALLTD-GRTSFFKEPSFSVQKMVEFFR 233 (554)
Q Consensus 206 ti~~~~~-g~~~~y~~g~~~~~~i~~fl~ 233 (554)
|++++.+ |+.....|+. . ..+...+.
T Consensus 113 t~i~~~~~G~~~~~~g~~-p-~~~~~~i~ 139 (167)
T 1z6n_A 113 LVLVLDEEFNLLGRFVER-P-QAVLDGGP 139 (167)
T ss_dssp EEEEECTTCCEEEEEESS-C-HHHHHHCH
T ss_pred eEEEECCCCCEEEEEcCC-C-HHHHHhHH
Confidence 9999976 5776666653 3 44444444
No 174
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.14 E-value=1.1e-10 Score=104.57 Aligned_cols=88 Identities=19% Similarity=0.401 Sum_probs=78.2
Q ss_pred CcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe---------------------------cCcHHHHHHhCC
Q psy16770 148 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------------------------HNEQGLARRLGV 200 (554)
Q Consensus 148 ~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~---------------------------~~~~~l~~~~~v 200 (554)
++++|.||++||++|+...|.+.++++++ ++.+..|++ +.+..++++|+|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKV 107 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSB
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCC
Confidence 79999999999999999999999999999 588999998 467889999999
Q ss_pred cCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCCCC
Q psy16770 201 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 201 ~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
.+ +|+++++ ++|+.+....|..+.+.|.+++++.....
T Consensus 108 ~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 108 LG-QPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp CS-SCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred Cc-ccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 97 9998877 89998777767778999999999887654
No 175
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.13 E-value=8.7e-11 Score=98.58 Aligned_cols=78 Identities=9% Similarity=0.225 Sum_probs=68.0
Q ss_pred CcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHH
Q psy16770 148 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 227 (554)
Q Consensus 148 ~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~ 227 (554)
.+.++.|+++||+.|+.+.|.++++++++ ++.+.+||.+++++++.+||+ . +|++++|.+|+.+. .|+ .+.+.
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~d~~l~~~ygv-~-VP~l~~~~dG~~v~-~g~-~~~~~ 101 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINIDGNEHLTRLYND-R-VPVLFAVNEDKELC-HYF-LDSDV 101 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTTCHHHHHHSTT-S-CSEEEETTTTEEEE-CSS-CCCHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECCCCHHHHHHhCC-C-CceEEEEECCEEEE-ecC-CCHHH
Confidence 35689999999999999999999999886 488999999999999999998 4 99999999998763 344 57788
Q ss_pred HHHHH
Q psy16770 228 MVEFF 232 (554)
Q Consensus 228 i~~fl 232 (554)
|.+|+
T Consensus 102 L~~~L 106 (107)
T 2fgx_A 102 IGAYL 106 (107)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88886
No 176
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.12 E-value=1.7e-10 Score=100.38 Aligned_cols=88 Identities=18% Similarity=0.300 Sum_probs=74.8
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe----------------------------cCcHHHHHH
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV----------------------------HNEQGLARR 197 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~----------------------------~~~~~l~~~ 197 (554)
.+++++|.||++||++|+...|.++++++.+.. ++.+..|++ +.+..++++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 457899999999999999999999999998654 689998853 446689999
Q ss_pred hCCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 198 LGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
|+|.+ +|+++++ ++|+......|..+.+++.+++++.
T Consensus 100 ~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 100 YGVRS-YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TTCCS-SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred cCccc-CCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99997 9999999 8899876666767889999988764
No 177
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.11 E-value=2.9e-10 Score=101.78 Aligned_cols=88 Identities=14% Similarity=0.204 Sum_probs=74.5
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------------------------cHHHHHHhCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 200 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------------------------~~~l~~~~~v 200 (554)
.+++++|.||++||++|+...|.++++++.+.+.++.+..|+++. +..++++|||
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 357999999999999999999999999999987679999999997 5789999999
Q ss_pred cCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 201 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 201 ~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
.+ +|+++++ ++|+.+.... +.+.+.+++++.+.
T Consensus 108 ~~-~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 108 VG-FPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp CS-SCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred Cc-CCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 97 9999998 7898876642 33567777766543
No 178
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.10 E-value=2.1e-11 Score=111.81 Aligned_cols=81 Identities=16% Similarity=0.226 Sum_probs=66.7
Q ss_pred ccccccccccCCCCCCcEEEEEEcccccccccchHH-H--HHHHHHhCCCCEEEEEEEecCcHHHHHHh--------CCc
Q psy16770 133 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPI-F--KKLMDELSPLGVGFFTVHVHNEQGLARRL--------GVG 201 (554)
Q Consensus 133 t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~-~--~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~--------~v~ 201 (554)
+.+.|+... ..+++++|.|||+||++|+.++|+ | .++++.+++ ++.+++||.++.+++++.| ||.
T Consensus 28 ~~ea~~~A~---~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~ 103 (173)
T 3ira_A 28 GEEAFEKAR---KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRG 103 (173)
T ss_dssp SHHHHHHHH---HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHH---HhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCC
Confidence 345566555 468899999999999999999993 4 567777765 4899999999999999999 999
Q ss_pred CCCCcceecc-CCeEEEE
Q psy16770 202 SQLPQIALLT-DGRTSFF 218 (554)
Q Consensus 202 ~~~Pti~~~~-~g~~~~y 218 (554)
+ +||++++. +|+++.-
T Consensus 104 g-~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 104 G-WPLNIIMTPGKKPFFA 120 (173)
T ss_dssp C-SSEEEEECTTSCEEEE
T ss_pred C-CcceeeECCCCCceee
Confidence 8 99999995 8887654
No 179
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.08 E-value=8.3e-12 Score=112.11 Aligned_cols=88 Identities=9% Similarity=0.103 Sum_probs=64.9
Q ss_pred CCCCcEEEEEEcccccccccchHHHHHHH---HHhCCCCEEEEEEEec-CcHHHHHHhCCcCCCCcceecc-CCeEEEEe
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIFKKLM---DELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQIALLT-DGRTSFFK 219 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~~~~a---~~l~~~~v~~~~Vd~~-~~~~l~~~~~v~~~~Pti~~~~-~g~~~~y~ 219 (554)
..+++++|.|||+||++|+.+.|.+.+.. +.++ ..|+.||++ ...+++.+++|.+ +||+++|. +|+.+...
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---~~fv~V~vD~e~~~~~~~~~v~~-~PT~~f~~~~G~~v~~~ 117 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---NKFIMLNLMHETTDKNLSPDGQY-VPRIMFVDPSLTVRADI 117 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---HTCEEEEESSCCSCGGGCTTCCC-SSEEEEECTTSCBCTTC
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---cCeEEEEecCCchhhHhhcCCCC-CCEEEEECCCCCEEEEE
Confidence 35789999999999999999999988642 2222 245666664 3456788999998 99999997 89876555
Q ss_pred CCc----------ccHHHHHHHHHHhC
Q psy16770 220 EPS----------FSVQKMVEFFRLKL 236 (554)
Q Consensus 220 ~g~----------~~~~~i~~fl~~~~ 236 (554)
.|. .+.+.+++.+++.+
T Consensus 118 ~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 118 AGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp CCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred eCCcCCcccccchhhHHHHHHHHHHHH
Confidence 454 35566777776654
No 180
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.08 E-value=1.3e-10 Score=94.00 Aligned_cols=74 Identities=20% Similarity=0.360 Sum_probs=62.5
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHH
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVE 230 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~ 230 (554)
++.|+++||+.|+.+.|.+++++.++ +.+||.+++++++++||++ +||+++ .+|+.+. | ..+.+.|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~~~l~~~~g~~--vPtl~~-~~G~~v~--g-~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDDAALESAYGLR--VPVLRD-PMGRELD--W-PFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTCHHHHHHHTTT--CSEEEC-TTCCEEE--S-CCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCCHHHHHHhCCC--cCeEEE-ECCEEEe--C-CCCHHHHHH
Confidence 68899999999999999998765432 6899999999999999994 999998 8898874 4 457899999
Q ss_pred HHHHhC
Q psy16770 231 FFRLKL 236 (554)
Q Consensus 231 fl~~~~ 236 (554)
++.+.+
T Consensus 71 ~l~~~~ 76 (87)
T 1ttz_A 71 WLDAAP 76 (87)
T ss_dssp HHHTCC
T ss_pred HHHHHH
Confidence 997654
No 181
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.06 E-value=3.9e-10 Score=100.85 Aligned_cols=91 Identities=13% Similarity=0.315 Sum_probs=74.9
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc-----------------------HHHHHHhCCcC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----------------------QGLARRLGVGS 202 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~-----------------------~~l~~~~~v~~ 202 (554)
.+++++|.||++||++|+...|.++++++.+.+.++.+..|+++.+ ..++++|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 4579999999999999999999999999999877799999999875 44899999997
Q ss_pred CCCcceec-cCCeEEEEeCCcc--cHHHHHHHHHHhCC
Q psy16770 203 QLPQIALL-TDGRTSFFKEPSF--SVQKMVEFFRLKLP 237 (554)
Q Consensus 203 ~~Pti~~~-~~g~~~~y~~g~~--~~~~i~~fl~~~~~ 237 (554)
+|+++++ ++|+.+....|.. +.+.+.+++++...
T Consensus 107 -~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 107 -VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp -BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred -CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 9976666 8898876554443 56789999887654
No 182
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.06 E-value=4.6e-10 Score=101.89 Aligned_cols=86 Identities=12% Similarity=0.360 Sum_probs=74.0
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec------------------Cc----------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------------------NE---------------- 191 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~------------------~~---------------- 191 (554)
.+++++|.||++||++|+...|.++++++++. ++.+..|+++ ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 45799999999999999999999999999997 6999999998 44
Q ss_pred ------HHHHHHhCCcCCCCcceec-cCCeEEEEeCCcc-cHHHHHHHHHHhC
Q psy16770 192 ------QGLARRLGVGSQLPQIALL-TDGRTSFFKEPSF-SVQKMVEFFRLKL 236 (554)
Q Consensus 192 ------~~l~~~~~v~~~~Pti~~~-~~g~~~~y~~g~~-~~~~i~~fl~~~~ 236 (554)
..+++.|+|.+ +|+++++ ++|+... . |.. +.+.|.+.+.+.+
T Consensus 114 ~~~~d~~~~~~~~~v~~-~P~~~lid~~G~i~~-~-g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 114 IMVMDDGSLVEKFNVRS-IDYIVIMDKSSNVLY-A-GTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEEECCSHHHHHTTCCS-SSEEEEEETTCCEEE-E-EESCCHHHHHHHHHHC-
T ss_pred eEEeChHHHHHHhCCCC-ceEEEEEcCCCcEEE-e-CCCCCHHHHHHHHHHHh
Confidence 38899999997 9999999 7888877 4 445 7899999888765
No 183
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.05 E-value=3.2e-10 Score=104.88 Aligned_cols=90 Identities=12% Similarity=0.280 Sum_probs=75.6
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCE------EEEEEEecC-cHHHHHHh--------------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGV------GFFTVHVHN-EQGLARRL-------------------- 198 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v------~~~~Vd~~~-~~~l~~~~-------------------- 198 (554)
.++++||.||++||++|+...|.++++++.+++.++ .++.|+++. ++..++++
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 457999999999999999999999999999986668 999999998 67777776
Q ss_pred -----CCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 199 -----GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 199 -----~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++.+ +|+++++ ++|+++..+.|..+.++|.+++.+.+
T Consensus 138 ~~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 138 SLGGVPASV-IPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GTTTCCTTC-CSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCC-CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 6887 9976665 88998877667678899999988764
No 184
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.05 E-value=2e-10 Score=104.61 Aligned_cols=86 Identities=16% Similarity=0.307 Sum_probs=70.1
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEE-----------------------ecCcHHHHHHhCCcC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH-----------------------VHNEQGLARRLGVGS 202 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd-----------------------~~~~~~l~~~~~v~~ 202 (554)
.+++++|.||++||++|+.+.|.++++++. ++.+..|+ ++.+..++++|+|.+
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 125 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG 125 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc
Confidence 567999999999999999999999999876 47777777 455678999999997
Q ss_pred CCCcc-eeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 203 QLPQI-ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 203 ~~Pti-~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+|++ ++.++|+......|..+.+.+.+++.+.+
T Consensus 126 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 126 -APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp -SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred -cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 9955 55588998766656668888888877654
No 185
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.04 E-value=5.8e-10 Score=100.54 Aligned_cols=92 Identities=17% Similarity=0.339 Sum_probs=75.2
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------------------cHHHHHHhCCcCCCCc
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------EQGLARRLGVGSQLPQ 206 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------------------~~~l~~~~~v~~~~Pt 206 (554)
.+++++|.||++||++|+...|.++++++.+...++.++.|+++. +..++++|+|.+ +|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR-LPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS-SSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC-cce
Confidence 357999999999999999999999999999986679999999987 689999999997 999
Q ss_pred ceec-cCCeEEEEeCCc--ccHHHHHHHHHHhCCC
Q psy16770 207 IALL-TDGRTSFFKEPS--FSVQKMVEFFRLKLPY 238 (554)
Q Consensus 207 i~~~-~~g~~~~y~~g~--~~~~~i~~fl~~~~~~ 238 (554)
++++ ++|++.....|. .+..++++.+.+...+
T Consensus 119 ~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 119 TFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred EEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 7777 889876555443 3456777777665543
No 186
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.04 E-value=2.8e-10 Score=100.60 Aligned_cols=83 Identities=13% Similarity=0.233 Sum_probs=70.1
Q ss_pred CCcEEEEEEcccccccccchHHHHH---HHHHhCCCCEEEEEEEecCcHH------------------------HHHHhC
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIFKK---LMDELSPLGVGFFTVHVHNEQG------------------------LARRLG 199 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~~~---~a~~l~~~~v~~~~Vd~~~~~~------------------------l~~~~~ 199 (554)
+++++|.||++||++|+...|.+++ +.+.+++.++.+..|+.+.+.+ +++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 4799999999999999999999999 9999976689999999987643 477899
Q ss_pred CcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHH
Q psy16770 200 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFR 233 (554)
Q Consensus 200 v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~ 233 (554)
|.+ +|+++++ ++|+++.... +.+.|.+|++
T Consensus 111 v~~-~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRA-IPTLYLLDKNKTVLLKDA---TLQKVEQYLA 141 (142)
T ss_dssp CTT-CSEEEEECTTCBEEEEEE---CHHHHHHHHH
T ss_pred CCc-CCeEEEECCCCcEEecCC---CHHHHHHHHh
Confidence 997 9999998 7788766553 4588888875
No 187
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.04 E-value=6.7e-10 Score=99.66 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=72.9
Q ss_pred CCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHH-----------------------HHHHhCCcCC
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-----------------------LARRLGVGSQ 203 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~-----------------------l~~~~~v~~~ 203 (554)
+++++|.||++||++|+...|.+.++++++++.++.+..|+++...+ ++++|+|.+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~- 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN- 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS-
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc-
Confidence 56899999999999999999999999999987679999999988664 899999997
Q ss_pred CCcceec-cCCeEEEEeCCcccHHHHHHHH
Q psy16770 204 LPQIALL-TDGRTSFFKEPSFSVQKMVEFF 232 (554)
Q Consensus 204 ~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl 232 (554)
+|+++++ ++|+++....|..+.++...-+
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLDEAIKKL 143 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHHHHHHHH
T ss_pred CceEEEECCCCeEEEecCCHHHHHHHHHHH
Confidence 9999999 7899888777766666654433
No 188
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.03 E-value=2.8e-10 Score=100.40 Aligned_cols=87 Identities=14% Similarity=0.337 Sum_probs=70.5
Q ss_pred CCCcEEEEEEcccccccccchHHHHH---HHHHhCCCCEEEEEEEecCcHHH------------------------HHHh
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKK---LMDELSPLGVGFFTVHVHNEQGL------------------------ARRL 198 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~---~a~~l~~~~v~~~~Vd~~~~~~l------------------------~~~~ 198 (554)
.+++++|.||++||++|+...|.+.+ +.+.+++.++.+..|+++.+... ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 35799999999999999999999988 88888766799999999876544 3389
Q ss_pred CCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 199 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 199 ~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+|.+ +|+++++ ++|+++. ++ .+.++|.+++.+..
T Consensus 106 ~v~~-~P~~~lid~~G~i~~--~~-~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 106 DIRA-TPTIYLLDGRKRVIL--KD-TSMEQLIDYLATQA 140 (142)
T ss_dssp CCCS-SSEEEEECTTCBEEE--CS-CCHHHHHHHHHC--
T ss_pred CCCC-CCeEEEECCCCCEEe--cC-CCHHHHHHHHHHHc
Confidence 9997 9999999 6887755 33 47799999987654
No 189
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.03 E-value=5.2e-09 Score=102.25 Aligned_cols=195 Identities=14% Similarity=0.164 Sum_probs=135.9
Q ss_pred ccccc-cccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~Lt-~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..|+ .+++++.+ ..+++++|-|+++| |....+.|.++|..+++ .+.|+.+ .+..+++++++++ |++
T Consensus 8 v~~l~s~~~~~~~l---~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~-~~~F~~~---~~~~v~~~~~~~~--p~i 75 (252)
T 2h8l_A 8 SVPLRTEEEFKKFI---SDKDASIVGFFDDS---FSEAHSEFLKAASNLRD-NYRFAHT---NVESLVNEYDDNG--EGI 75 (252)
T ss_dssp EEECCSHHHHHHHH---TSSSCEEEEEESCT---TSHHHHHHHHHHHHTTT-TSCEEEE---CCHHHHHHHCSSS--EEE
T ss_pred ceeecCHHHHHHHh---hcCCeEEEEEECCC---CChHHHHHHHHHHhccc-CcEEEEE---ChHHHHHHhCCCC--CcE
Confidence 55664 45566656 45678999999998 55677899999999976 3788877 3678999999984 999
Q ss_pred eeccC--------CeEEEE-eCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEe-cC-Cch---
Q psy16770 208 ALLTD--------GRTSFF-KEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQ-RS-LPV--- 273 (554)
Q Consensus 208 ~~~~~--------g~~~~y-~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~-~~-~~~--- 273 (554)
++|+. .....| .|. .+.++|.+|+....-|. +..+|.+++..+. ....+++++. +. ...
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~-~~~~~l~~fi~~~~~Pl-v~e~t~~n~~~~~-----~~~~~v~~~~~~~~~~~~~~ 148 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQK-MTSGKIKKFIQENIFGI-CPHMTEDNKDLIQ-----GKDLLIAYYDVDYEKNAKGS 148 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSS-CCHHHHHHHHHHHSSCS-SCEECTTTHHHHS-----SSSEEEEEECCBTTTBHHHH
T ss_pred EEEcchhhcccccccccccCCCC-cCHHHHHHHHHhcccCC-eeecccccHhhhc-----CCCeEEEEeecchhhcchhH
Confidence 99974 245667 665 58899999999988766 7788899888763 2233334442 11 111
Q ss_pred -hHHHHH--HhhccCCc---eEEEEEEccCCCChhHHhHhCC--C-CCCceEEEEeCCCCCCCceeecCCCChhH--HHh
Q psy16770 274 -RLRYLI--NAFKHRTT---IVFGVIVYDQEDSSSVFQRFKV--P-GDKDSLLIFKEDKDRPSASITMNSIPVPT--LQD 342 (554)
Q Consensus 274 -~~~~~~--~a~~~~~~---v~Fg~v~~~~~~~~~l~~k~~i--~-~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~--l~~ 342 (554)
.++... .|.+++++ +.|++++.+ ....+.+.||+ + ...|+++++..... .+...++++.+. |.+
T Consensus 149 ~~~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~~~---ky~~~~~~t~~~~~i~~ 223 (252)
T 2h8l_A 149 NYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKGE---KFVMQEEFSRDGKALER 223 (252)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTTSC---EEECCSCCCTTSHHHHH
T ss_pred HHHHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCcCc---EecCCcccCcchHHHHH
Confidence 122221 22255555 999999976 56678999999 3 25899999864222 233446777777 999
Q ss_pred HHhcC
Q psy16770 343 ITDNN 347 (554)
Q Consensus 343 fi~~~ 347 (554)
|++..
T Consensus 224 F~~~~ 228 (252)
T 2h8l_A 224 FLQDY 228 (252)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99764
No 190
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.03 E-value=1.1e-09 Score=97.78 Aligned_cols=134 Identities=13% Similarity=0.144 Sum_probs=86.3
Q ss_pred HHhcCCCcccccccchhhhhhcCCCCceEEEEEcC-CCCcchhHHHHHHHHHhhccCCCCceEEEEEec--ccchHHHHh
Q psy16770 343 ITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHNNIAFMYVFI--EKQPEFVNA 419 (554)
Q Consensus 343 fi~~~~~~~v~~lt~~~~~~~~c~~~~lcvvl~~~-~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~--~~q~~~~~~ 419 (554)
-++.|.+|+++++|.++.....-..-...+++|.. ...+.+..++.++++|++ |++ ++.|+++|. +.....++.
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~--fkg-ki~Fv~vd~~~~~~~~~l~~ 83 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAES--FKG-KILFAFIDSDHTDNQRILEF 83 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHT--TTT-TCEEEEECTTCGGGHHHHHH
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHH--cCC-ceEEEEEecchHhHHHHHHH
Confidence 35678899999999876533211011333444553 334567789999999999 975 599999999 555566777
Q ss_pred hCCCCCCccccceEEEEEEec--CCCeeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCCCccccccccch-hhh
Q psy16770 420 LTSPEDSSEISLHIAAMWRMD--YKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEI-SDE 494 (554)
Q Consensus 420 ~~~~~~~~~~~~~~~~v~~~~--~~~~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~~~~~~~~lp~~-~de 494 (554)
| |..+ ..+|++.+.+ .++.||.+ +.. ++|.+.|.+|+++++.|+..|.-++++||+- +|+
T Consensus 84 f----Gl~~--~~~P~v~i~~~~~~~~Ky~~-~~~--------~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~wn~~ 146 (147)
T 3bj5_A 84 F----GLKK--EECPAVRLITLEEEMTKYKP-ESE--------ELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQ 146 (147)
T ss_dssp T----TCCG--GGCSEEEEEECSSSCEEECC-SCC--------CCCHHHHHHHHHHHHTTCSCEEECCSCCCGGGC--
T ss_pred c----CCCc--ccCCEEEEEecccccccCCC-Ccc--------cCCHHHHHHHHHHHHcCCccccccCCCCCCCcCCC
Confidence 6 3111 2455554444 34678853 322 5688999999999999999999999999997 765
No 191
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.01 E-value=6.2e-09 Score=101.58 Aligned_cols=195 Identities=8% Similarity=0.020 Sum_probs=136.9
Q ss_pred ccccc-cccccccccCCCC-CCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCc
Q psy16770 129 KLSTT-HWNFEKNYIPKSY-TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 206 (554)
Q Consensus 129 ~~~Lt-~~~F~~~v~~~~~-~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pt 206 (554)
+..|+ .+++++.+ +. +++++|-|+.++ |....+.|.++|+.+++ .+.|+.+ .+.+++.++++++ |+
T Consensus 8 v~~l~s~~~~~~~~---~~~~~v~vVgff~~~---~~~~~~~F~~~A~~lr~-~~~F~~t---~~~~v~~~~~v~~--p~ 75 (250)
T 3ec3_A 8 SKEILTLKQVQEFL---KDGDDVVILGVFQGV---GDPGYLQYQDAANTLRE-DYKFHHT---FSTEIAKFLKVSL--GK 75 (250)
T ss_dssp SEECCCHHHHHHHH---HHCSSCEEEEECSCT---TCHHHHHHHHHHHHHTT-TCCEEEE---CCHHHHHHHTCCS--SE
T ss_pred ceecCCHHHHHHHH---hcCCCeEEEEEEcCC---CchHHHHHHHHHHhhhc-CcEEEEE---CcHHHHHHcCCCC--Ce
Confidence 45564 47777766 34 679999999987 45788999999999976 4888875 4678999999984 99
Q ss_pred ceeccC--------CeEEEEeC-CcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEec--CC---c
Q psy16770 207 IALLTD--------GRTSFFKE-PSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQR--SL---P 272 (554)
Q Consensus 207 i~~~~~--------g~~~~y~~-g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~--~~---~ 272 (554)
|++|+. .....|.| +..+.++|.+|+....-|. +..+|.++...... .++.+++|.. .. .
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Pl-v~e~t~~n~~~~~~-----~~~l~~~~~~~d~~~~~~ 149 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPL-VGHRKTSNDAKRYS-----KRPLVVVYYSVDFSFDYR 149 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCT-EEEECTTTHHHHSC-----SSSEEEEEECCCCSTTTH
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCc-eeecCccchhhhhc-----cCccEEEEEecccccccc
Confidence 999974 34577776 5678899999999998776 77888888877652 3455554432 11 1
Q ss_pred h---hHHHHH--HhhccCCceEEEEEEccCCCChhHHhHhCCCCC--CceEEEEeCCCCCCCceeec-CCCChhHHHhHH
Q psy16770 273 V---RLRYLI--NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGD--KDSLLIFKEDKDRPSASITM-NSIPVPTLQDIT 344 (554)
Q Consensus 273 ~---~~~~~~--~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~--~Ptlvvfk~~~~~~~~~i~~-~~~~~~~l~~fi 344 (554)
. .++... .|-+++ ++.|++++.. ......+.||++.. .|.++++..+.. .+... ++++.+.|.+|+
T Consensus 150 ~~~~~~~~~~~~vAk~~k-ki~F~~~d~~--~~~~~l~~fgl~~~~~~p~~~~~~~~~~---ky~~~~~~~t~~~i~~Fv 223 (250)
T 3ec3_A 150 TATQFWRNKVLEVAKDFP-EYTFAIADEE--DYATEVKDLGLSESGGDVNAAILDESGK---KFAMEPEEFDSDALREFV 223 (250)
T ss_dssp HHHHHHHHHHHHHHTTCT-TSEEEEEETT--TTHHHHHHTTCSSCSCSCEEEEECTTSC---EEECCCCSCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhc-ceeEEEEcHH--HHHHHHHHcCCCccCCCcEEEEEcCCCc---eecCCcccCCHHHHHHHH
Confidence 1 122222 223677 8999999875 45667889999742 357777753221 12233 578899999999
Q ss_pred hcC
Q psy16770 345 DNN 347 (554)
Q Consensus 345 ~~~ 347 (554)
+..
T Consensus 224 ~~~ 226 (250)
T 3ec3_A 224 MAF 226 (250)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 192
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.00 E-value=1.1e-10 Score=115.44 Aligned_cols=74 Identities=19% Similarity=0.361 Sum_probs=59.8
Q ss_pred EEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec------CcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcc
Q psy16770 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 223 (554)
Q Consensus 150 ~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~------~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~ 223 (554)
.+|+||||||+||++++|.|++++++++ .|||+ +++++|++++|++ +||+.+ +|+. +. |.+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------~Vd~d~~d~~~~~~~la~~~gI~~-vPT~~i--~G~~--~~-G~~ 266 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQAQECTEAGITS-YPTWII--NGRT--YT-GVR 266 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCSSCSSSCCCHHHHTTTCCS-TTEEEE--TTEE--EE-SCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC-------EEEEeecCchhhHHHHHHHcCCcc-cCeEEE--CCEE--ec-CCC
Confidence 3799999999999999999999997763 45555 3789999999998 999655 8874 54 556
Q ss_pred cHHHHHHHHHHhC
Q psy16770 224 SVQKMVEFFRLKL 236 (554)
Q Consensus 224 ~~~~i~~fl~~~~ 236 (554)
+.++|.+|+.-..
T Consensus 267 ~~~~L~~~l~~~~ 279 (291)
T 3kp9_A 267 SLEALAVASGYPL 279 (291)
T ss_dssp CHHHHHHHTCCCC
T ss_pred CHHHHHHHHCCCC
Confidence 8899999885443
No 193
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.98 E-value=6.5e-10 Score=98.42 Aligned_cols=73 Identities=12% Similarity=0.233 Sum_probs=63.5
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCC-CCEEEEEEEecCc------------------------HHHHHHhCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGV 200 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~-~~v~~~~Vd~~~~------------------------~~l~~~~~v 200 (554)
.+++++|.||++||++|+.+.|.++++++++++ .++.+..|+++.+ ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 357999999999999999999999999999984 4799999998863 579999999
Q ss_pred cCCCCcceecc--CCeEEEEe
Q psy16770 201 GSQLPQIALLT--DGRTSFFK 219 (554)
Q Consensus 201 ~~~~Pti~~~~--~g~~~~y~ 219 (554)
.+ +||++++. +|+++...
T Consensus 107 ~~-~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 107 KS-IPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp CS-SSEEEEEETTTCCEEESC
T ss_pred CC-CCEEEEEECCCCcEEecc
Confidence 97 99999994 88876655
No 194
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.97 E-value=2.7e-09 Score=95.20 Aligned_cols=86 Identities=14% Similarity=0.247 Sum_probs=73.7
Q ss_pred CCCcEEEEEEcccccc--cccchHHHHHHHHHh-CCCCEEEEEEEecCcH-------------------------HHHHH
Q psy16770 146 YTTPHLILFYSDWCFA--CLQVEPIFKKLMDEL-SPLGVGFFTVHVHNEQ-------------------------GLARR 197 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~--C~~l~p~~~~~a~~l-~~~~v~~~~Vd~~~~~-------------------------~l~~~ 197 (554)
.+++++|.||++||++ |+...|.+.++.+++ ++.++.+..|+++..+ .+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3579999999999999 999999999999999 7667999999998764 79999
Q ss_pred hCCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 198 LGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
|+|.+ +|+++++ ++|+.+.... +.+.+.+.+.+.
T Consensus 112 ~~v~~-~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l 146 (150)
T 3fw2_A 112 YSIYK-IPANILLSSDGKILAKNL---RGEELKKKIENI 146 (150)
T ss_dssp TTCCS-SSEEEEECTTSBEEEESC---CHHHHHHHHHHH
T ss_pred cCCCc-cCeEEEECCCCEEEEccC---CHHHHHHHHHHH
Confidence 99997 9999999 7898876653 557777777654
No 195
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.97 E-value=8.5e-10 Score=97.52 Aligned_cols=74 Identities=15% Similarity=0.390 Sum_probs=63.8
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhC-CCCEEEEEEEecCc------------------------HHHHHHhCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELS-PLGVGFFTVHVHNE------------------------QGLARRLGV 200 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~-~~~v~~~~Vd~~~~------------------------~~l~~~~~v 200 (554)
.+++++|.||++||++|+.+.|.+++++++++ ..++.+..|+++.+ ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 45789999999999999999999999999997 24699999998863 479999999
Q ss_pred cCCCCcceecc--CCeEEEEeC
Q psy16770 201 GSQLPQIALLT--DGRTSFFKE 220 (554)
Q Consensus 201 ~~~~Pti~~~~--~g~~~~y~~ 220 (554)
.+ +||++++. +|+.+...+
T Consensus 107 ~~-~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 107 ES-IPTLITINADTGAIIGTQA 127 (144)
T ss_dssp CS-SSEEEEEETTTCCEEESCH
T ss_pred CC-CCEEEEEECCCCeEEecch
Confidence 97 99999997 788776553
No 196
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.96 E-value=7.1e-10 Score=101.09 Aligned_cols=74 Identities=19% Similarity=0.392 Sum_probs=64.4
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCC-CCEEEEEEEecCc------------------------HHHHHHhCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGV 200 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~-~~v~~~~Vd~~~~------------------------~~l~~~~~v 200 (554)
.++++||.||++||++|+.+.|.++++++++++ .++.+..|+++.. ..++++|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 467999999999999999999999999999985 4799999998876 689999999
Q ss_pred cCCCCcceecc-C-CeEEEEeC
Q psy16770 201 GSQLPQIALLT-D-GRTSFFKE 220 (554)
Q Consensus 201 ~~~~Pti~~~~-~-g~~~~y~~ 220 (554)
.+ +||++++. + |+++...+
T Consensus 127 ~~-~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 127 ES-IPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp CS-SSEEEEEETTTCCEEESCH
T ss_pred CC-CCEEEEEeCCCCEEEeccc
Confidence 97 99999995 4 87766543
No 197
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.96 E-value=2.8e-08 Score=99.55 Aligned_cols=216 Identities=16% Similarity=0.195 Sum_probs=143.3
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-----HHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-----~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..+|.+++++.+.. .++++++.|...--++.+.. ..+..+.+.+.|+.++++...+.+++++|+|.+ .||
T Consensus 19 vv~lt~~~f~~~i~~---~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~-~Pt 94 (298)
T 3ed3_A 19 ISELTPKSFDKAIHN---TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG-FPT 94 (298)
T ss_dssp CEECCHHHHHHHHTS---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB-SSE
T ss_pred eEEeCHHHHHHHHHh---CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc-cce
Confidence 677899999999853 46666776644333322221 222255667999999998666889999999997 999
Q ss_pred EEEEeCCCC--------------CCCceeecCCCChhHHHhHHhcCCCcccccccchhhhhhcCCC-CceEEEEEcCCCC
Q psy16770 316 LLIFKEDKD--------------RPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPV-KKLCVVLFSEDSP 380 (554)
Q Consensus 316 lvvfk~~~~--------------~~~~~i~~~~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~c~~-~~lcvvl~~~~~~ 380 (554)
+++|+++.. ......+.|..+.+.|.+|+....-+.+.++++.+.++..... ...+|++|....
T Consensus 95 ~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~~~- 173 (298)
T 3ed3_A 95 LMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSKQD- 173 (298)
T ss_dssp EEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEESSS-
T ss_pred EEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcCCC-
Confidence 999997541 1123467889999999999999988888888776555544322 367888874332
Q ss_pred cchhHHHHHHHHHhhccCCCCceEEEEEecccchHHH--HhhCCCCCCcc------------ccceEEEEEEecCCCeeE
Q psy16770 381 EHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFV--NALTSPEDSSE------------ISLHIAAMWRMDYKKIKY 446 (554)
Q Consensus 381 ~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~--~~~~~~~~~~~------------~~~~~~~v~~~~~~~~ky 446 (554)
.....|+++|.. +++ .+.|+.+...+-.... +.|... .++ .....|.|+.......++
T Consensus 174 ---~~~~~f~~~A~~--~~~-~~~F~~v~~~~~a~~~~~~~~~~~--~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~ 245 (298)
T 3ed3_A 174 ---KISPVYKSIALD--WLG-KFDFYSISNKKLKQLTDMNPTYEK--TPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKF 245 (298)
T ss_dssp ---SCCHHHHHHHHH--TBT-TEEEEEEEGGGCCCCCTTCTTSTT--CHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEE
T ss_pred ---cchHHHHHHHHH--hhc-CcEEEEEcchHhhhhhhhhhhccc--CcchhhhhhcccccccccCCCeEEEEcCCCCce
Confidence 345789999998 865 5999999865432211 111000 000 002345554444455667
Q ss_pred EEecCCCCCcccccchhhHHHHHHHHhhhcC
Q psy16770 447 GWLLGDAVDDWKDYNTTKDRLDAGLRSLVND 477 (554)
Q Consensus 447 ~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g 477 (554)
..++|. .++++.|.+||..-...
T Consensus 246 ~~y~g~--------~~~~~~i~~fi~~~~~~ 268 (298)
T 3ed3_A 246 WEYEGN--------SINKNDISKFLRDTFSI 268 (298)
T ss_dssp EECCCS--------SCCHHHHHHHHHHHHTC
T ss_pred EEeccc--------cCCHHHHHHHHHhhcCC
Confidence 677753 46899999999865544
No 198
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.96 E-value=6.9e-10 Score=98.57 Aligned_cols=73 Identities=16% Similarity=0.304 Sum_probs=63.4
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCC-CCEEEEEEEecCc------------------------HHHHHHhCC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGV 200 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~-~~v~~~~Vd~~~~------------------------~~l~~~~~v 200 (554)
.+++++|.||++||++|+.+.|.++++++++++ .++.+..|+++.+ ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 457999999999999999999999999999983 4699999998863 579999999
Q ss_pred cCCCCcceecc--CCeEEEEe
Q psy16770 201 GSQLPQIALLT--DGRTSFFK 219 (554)
Q Consensus 201 ~~~~Pti~~~~--~g~~~~y~ 219 (554)
.+ +||++++. +|+++...
T Consensus 107 ~~-~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 107 ES-IPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp CS-SSEEEEEETTTCCEEESC
T ss_pred CC-CCEEEEEECCCCeEEEec
Confidence 97 99999995 78876654
No 199
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.95 E-value=8.9e-10 Score=98.64 Aligned_cols=87 Identities=11% Similarity=0.317 Sum_probs=70.2
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec-----------------------CcHHHHHHhCCcC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------NEQGLARRLGVGS 202 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~-----------------------~~~~l~~~~~v~~ 202 (554)
.+++++|.||++||++|+.+.|.++++++. + ++.+..|+++ .+..++++|+|.+
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 117 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG 117 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc
Confidence 367999999999999999999999998876 2 4788887764 4568999999997
Q ss_pred CCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 203 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 203 ~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+|+++++ ++|+.+....|..+.+.+.+++.+.+
T Consensus 118 -~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 118 -VPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp -SCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred -cCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 9976665 88988766556668888888887654
No 200
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.93 E-value=2.6e-09 Score=98.93 Aligned_cols=92 Identities=13% Similarity=0.303 Sum_probs=75.1
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc-----HHHHHHhCCc-------------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----QGLARRLGVG------------------- 201 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~-----~~l~~~~~v~------------------- 201 (554)
.+++++|.||++||++|+...|.++++.+.++..++.+..|+++.+ ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 3568999999999999999999999999999865799999999865 5677888874
Q ss_pred ----CCCCcceec-cCCeEEEEeCCccc--HHHHHHHHHHhCCC
Q psy16770 202 ----SQLPQIALL-TDGRTSFFKEPSFS--VQKMVEFFRLKLPY 238 (554)
Q Consensus 202 ----~~~Pti~~~-~~g~~~~y~~g~~~--~~~i~~fl~~~~~~ 238 (554)
+ +|+++++ ++|+++..+.|..+ .+++.+++++.+..
T Consensus 139 ~~~~~-~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 139 GRALG-MPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp TCCSS-SSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred cccCC-CCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 7 9999888 88988665544433 68899999887654
No 201
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.92 E-value=1.7e-09 Score=110.51 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=77.5
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC---------------------------cHHHHHHh
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------------EQGLARRL 198 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~---------------------------~~~l~~~~ 198 (554)
.++++||.||++||++|+.+.|.++++++++++.++.++.|+++. +..++++|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 367999999999999999999999999999986679999998752 45799999
Q ss_pred CCcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 199 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 199 ~v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+|.+ +|+++++ ++|+++....|..+.+.|.++|++.+
T Consensus 161 gV~~-~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 RNRY-WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp TCCE-ESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred CCCc-cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 9997 9998888 88998777666668888888887764
No 202
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.91 E-value=2.7e-09 Score=94.37 Aligned_cols=84 Identities=10% Similarity=0.174 Sum_probs=69.4
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc--------------------------HHHHHHhC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE--------------------------QGLARRLG 199 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~--------------------------~~l~~~~~ 199 (554)
.+++++|.||++||++|+...|.+.++.+++++.++.+..|+++.+ ..+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 3579999999999999999999999999999876899999988753 35889999
Q ss_pred CcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHH
Q psy16770 200 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFR 233 (554)
Q Consensus 200 v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~ 233 (554)
|.+ +|+.+++ ++|+++.... ..+++.+++.
T Consensus 111 v~~-~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 141 (143)
T 4fo5_A 111 LRK-GFKNFLINDEGVIIAANV---TPEKLTEILK 141 (143)
T ss_dssp GGG-CCCEEEECTTSBEEEESC---CHHHHHHHHT
T ss_pred CCC-CCcEEEECCCCEEEEccC---CHHHHHHHHH
Confidence 997 9998888 5888776543 3466766664
No 203
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.91 E-value=2e-09 Score=99.15 Aligned_cols=86 Identities=20% Similarity=0.341 Sum_probs=70.9
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe-----------------------cCcHHHHHHhCCcC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV-----------------------HNEQGLARRLGVGS 202 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~-----------------------~~~~~l~~~~~v~~ 202 (554)
.+++++|.||++||++|+...|.+++++++ ++.+..|++ +.+..+++.|+|.+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 132 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG 132 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC
Confidence 357999999999999999999999999886 478888875 44668999999997
Q ss_pred CCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 203 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 203 ~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+|+++++ ++|++.....|..+.+.+.+++.+.+
T Consensus 133 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 133 -APETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp -SCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred -CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 9977776 78988766656668888888877654
No 204
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.91 E-value=1.4e-09 Score=101.61 Aligned_cols=88 Identities=16% Similarity=0.312 Sum_probs=74.8
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec-----------------------------CcHHHHHHhC
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------------NEQGLARRLG 199 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~-----------------------------~~~~l~~~~~ 199 (554)
+++|.||++||++|+...|.++++.+++.+.++.+..|+++ .+..++++|+
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYD 127 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhC
Confidence 59999999999999999999999999998667999999983 4568999999
Q ss_pred CcCCCCcceec-cCCeEEEE---------eCCcccHHHHHHHHHHhCC
Q psy16770 200 VGSQLPQIALL-TDGRTSFF---------KEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 200 v~~~~Pti~~~-~~g~~~~y---------~~g~~~~~~i~~fl~~~~~ 237 (554)
|.+ +|+++++ ++|+++.. ..|..+.+.|.+.+++.+.
T Consensus 128 v~~-~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 128 AAC-TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp CCE-ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred CCC-CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 997 9999998 78988765 3355577889888887754
No 205
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.85 E-value=4.3e-09 Score=97.69 Aligned_cols=89 Identities=11% Similarity=0.125 Sum_probs=73.6
Q ss_pred CCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe-----------------------------cCcHHHHHH
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV-----------------------------HNEQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~-----------------------------~~~~~l~~~ 197 (554)
+++++|.||++||++|+...|.++++++++.+. +.+..|++ +.+..+++.
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 479999999999999999999999999999876 99999998 345679999
Q ss_pred hCCcCCCCcceec-cCCeEEEEeCC---------cccHHHHHHHHHHhCCC
Q psy16770 198 LGVGSQLPQIALL-TDGRTSFFKEP---------SFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 198 ~~v~~~~Pti~~~-~~g~~~~y~~g---------~~~~~~i~~fl~~~~~~ 238 (554)
|+|.+ +|+++++ ++|+++.. |. ..+.+.|.+.+++.+..
T Consensus 112 ~~v~~-~P~~~lid~~G~i~~~-g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 112 YRALR-TPEVFLFDERRLLRYH-GRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp TTCCE-ESEEEEECTTCBEEEE-ECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred cCCCC-CCeEEEECCCCcEEEE-EecCCccccccccCHHHHHHHHHHHHcC
Confidence 99997 9999998 78887655 32 12457888888776543
No 206
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.85 E-value=2.3e-09 Score=89.10 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=65.7
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec--CcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcc
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 223 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~--~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~ 223 (554)
...+.++.|+++||++|+++.|.++++++ ++.+..||.+ ++++++++|| .+ +|++ +.+|+.. ..++ .
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~-----~i~~~~vdi~~~~~~el~~~~g-~~-vP~l--~~~g~~~-~~~g-~ 82 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD-----RFILQEVDITLPENSTWYERYK-FD-IPVF--HLNGQFL-MMHR-V 82 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS-----SSEEEEEETTSSTTHHHHHHSS-SS-CSEE--EESSSEE-EESS-C
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh-----CCeEEEEECCCcchHHHHHHHC-CC-CCEE--EECCEEE-EecC-C
Confidence 45678999999999999999998876543 4899999998 7899999999 97 9986 4678765 4555 4
Q ss_pred cHHHHHHHHHHhCC
Q psy16770 224 SVQKMVEFFRLKLP 237 (554)
Q Consensus 224 ~~~~i~~fl~~~~~ 237 (554)
+.+.|.+++.+.+.
T Consensus 83 ~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 83 NTSKLEKQLRKLSG 96 (100)
T ss_dssp CHHHHHHHHHSSSC
T ss_pred CHHHHHHHHHHHHh
Confidence 77899999986653
No 207
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.30 E-value=4.9e-10 Score=98.78 Aligned_cols=74 Identities=18% Similarity=0.407 Sum_probs=62.0
Q ss_pred CC-cEEEEEEcccccccccchHHHHHHHHHhC--CCCEEEEEEEecCc-------------------------HHHHHHh
Q psy16770 147 TT-PHLILFYSDWCFACLQVEPIFKKLMDELS--PLGVGFFTVHVHNE-------------------------QGLARRL 198 (554)
Q Consensus 147 ~~-~~lV~Fya~wC~~C~~l~p~~~~~a~~l~--~~~v~~~~Vd~~~~-------------------------~~l~~~~ 198 (554)
++ +++|.||++||++|+.+.|.++++++.++ +.++.+..|+++.+ ..++++|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 89999999999999999999999999884 23588888888755 3799999
Q ss_pred CCcCCCCcceecc-CCeEEEEeCC
Q psy16770 199 GVGSQLPQIALLT-DGRTSFFKEP 221 (554)
Q Consensus 199 ~v~~~~Pti~~~~-~g~~~~y~~g 221 (554)
+|.+ +|+++++. +|+++...+.
T Consensus 105 ~v~~-~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 105 GITG-IPALVIVKKDGTLISMNGR 127 (143)
Confidence 9997 99999995 8887766543
No 208
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.81 E-value=1.2e-08 Score=97.31 Aligned_cols=90 Identities=14% Similarity=0.268 Sum_probs=73.9
Q ss_pred CC-cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe-----------------------------cCcHHHHH
Q psy16770 147 TT-PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV-----------------------------HNEQGLAR 196 (554)
Q Consensus 147 ~~-~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~-----------------------------~~~~~l~~ 196 (554)
++ ++||.||++||++|+...|.++++++++++.++.++.|++ +.+..+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 44 5999999999999999999999999999887899999998 34678999
Q ss_pred HhCCcCCCCcceec-cCCeEEEEeCC----------cccHHHHHHHHHHhCCC
Q psy16770 197 RLGVGSQLPQIALL-TDGRTSFFKEP----------SFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 197 ~~~v~~~~Pti~~~-~~g~~~~y~~g----------~~~~~~i~~fl~~~~~~ 238 (554)
.|+|.+ +|+++++ ++|+++ |.|. ..+.+.|.+.|++.+..
T Consensus 138 ~~~v~~-~P~~~liD~~G~i~-~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 138 AYGAAC-TPDFFLYDRERRLV-YHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp HHTCCE-ESEEEEECTTCBEE-EEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred HcCCCC-CCeEEEECCCCcEE-EeccccccccccccccCHHHHHHHHHHHHcC
Confidence 999997 9999999 788876 4332 23457788888776543
No 209
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.80 E-value=1.4e-09 Score=86.30 Aligned_cols=73 Identities=19% Similarity=0.337 Sum_probs=53.3
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec-CcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHH
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKM 228 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~-~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i 228 (554)
++.||++||++|+.+.|.++++++++.. .+.+..||.+ .+.++++++|+.+ +||+++ +|+... .|+..+.++|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~gv~~-vPt~~i--~g~~~~-~G~~~~~~~l 77 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKARIAEAEKAGVKS-VPALVI--DGAAFH-INFGAGIDDL 77 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSSTHHHHHHHTCCE-EEEEEE--TTEEEE-EEEEEEHHHH
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhhHHHHHHcCCCc-CCEEEE--CCEEEE-eccCcCHHHh
Confidence 6779999999999999999988766531 2444444443 5788999999997 999877 787543 4443354554
No 210
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.79 E-value=1.1e-09 Score=93.18 Aligned_cols=79 Identities=14% Similarity=0.328 Sum_probs=57.2
Q ss_pred CcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc-----HHHHHHhCCcCCCCcceeccCCeEEEEeCCc
Q psy16770 148 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----QGLARRLGVGSQLPQIALLTDGRTSFFKEPS 222 (554)
Q Consensus 148 ~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~-----~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~ 222 (554)
+++++ ||++||++|+.+.|.+++++. .+.+..||.+.+ ..+++++|+.+ +||+ |.+|+.+....|.
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~~~~~~~~~l~~~~~v~~-~Pt~--~~~g~~v~~~~~~ 90 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGA-----SYKVVELDELSDGSQLQSALAHWTGRGT-VPNV--FIGGKQIGGCDTV 90 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGSTTHHHHHHHHHHHHSCCS-SCEE--EETTEEEECHHHH
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCC-----CeEEEEccCCCChHHHHHHHHHHhCCCC-cCEE--EECCEEECChHHH
Confidence 45555 999999999999999988743 245666666655 57999999997 9999 5688776544333
Q ss_pred c---cHHHHHHHHHHh
Q psy16770 223 F---SVQKMVEFFRLK 235 (554)
Q Consensus 223 ~---~~~~i~~fl~~~ 235 (554)
. +.+.|.+++.+.
T Consensus 91 ~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 91 VEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHTTCHHHHHHHT
T ss_pred HHHHhCChHHHHHHHc
Confidence 2 445677777653
No 211
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=7.2e-10 Score=99.92 Aligned_cols=88 Identities=9% Similarity=0.215 Sum_probs=68.4
Q ss_pred CCCcEEEEEEcccccccccchHHHHH-HHHHhC-CCCEEEEEEEecCcHHHHHHhC------------------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKK-LMDELS-PLGVGFFTVHVHNEQGLARRLG------------------------ 199 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~-~a~~l~-~~~v~~~~Vd~~~~~~l~~~~~------------------------ 199 (554)
.+++++|.||++||++|+...|.+++ +.+.++ ..++.++.|+++...+.++++.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 35689999999999999999999998 888877 5579999999887655444444
Q ss_pred CcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 200 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 200 v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
+.+ +|+++++ ++|+.+....|. +.+++.+++.+.
T Consensus 112 ~~~-~P~~~lid~~G~i~~~~~g~-~~~~l~~~l~~l 146 (159)
T 2ls5_A 112 DAG-ITRNVLIDREGKIVKLTRLY-NEEEFASLVQQI 146 (159)
Confidence 676 9999988 789887666663 556666666543
No 212
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.77 E-value=9.6e-09 Score=93.50 Aligned_cols=89 Identities=20% Similarity=0.308 Sum_probs=73.4
Q ss_pred CCCcEEEEEEcccccc-cccchHHHHHHHHHhCCC---CEEEEEEEecCc----------------------------HH
Q psy16770 146 YTTPHLILFYSDWCFA-CLQVEPIFKKLMDELSPL---GVGFFTVHVHNE----------------------------QG 193 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~-C~~l~p~~~~~a~~l~~~---~v~~~~Vd~~~~----------------------------~~ 193 (554)
.+++++|.||++||++ |+...|.+.++.++++.. ++.+..|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3579999999999997 999999999999998743 599999998743 36
Q ss_pred HHHHhCC---------------cCCCCcceeccCCeEEEEeCCcc--cHHHHHHHHHHh
Q psy16770 194 LARRLGV---------------GSQLPQIALLTDGRTSFFKEPSF--SVQKMVEFFRLK 235 (554)
Q Consensus 194 l~~~~~v---------------~~~~Pti~~~~~g~~~~y~~g~~--~~~~i~~fl~~~ 235 (554)
++++||+ .+ .|+++++.+|+++..+.|.. +.+.|.+.+++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~-~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDH-TATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEE-CCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEec-CCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 7777774 55 89999988888877776666 778899888765
No 213
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.74 E-value=1.1e-07 Score=98.53 Aligned_cols=194 Identities=8% Similarity=0.031 Sum_probs=119.3
Q ss_pred ccccc-cccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~Lt-~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..++ .++++. + ..+++++|.||+++|..+ .+.|.++|..+++. +.|+.+.+ ++++++++++ +| +
T Consensus 120 v~~l~~~~~l~~-l---~~~~~~~v~ff~~~~~~~---~~~f~~~A~~~~~~-~~F~~~~~----~~~~~~~v~~-~p-i 185 (382)
T 2r2j_A 120 IQEIRDLAEITT-L---DRSKRNIIGYFEQKDSDN---YRVFERVANILHDD-CAFLSAFG----DVSKPERYSG-DN-I 185 (382)
T ss_dssp CEEC----------------CCEEEEEESCSSSHH---HHHHHHHHHHHTTT-CEEEEEES----CC---------CE-E
T ss_pred ceecCCHHHHHH-h---cCCCCEEEEEECCCCChh---HHHHHHHHHHhhcc-ceEEEEeh----hhHHhhCCCC-Cc-e
Confidence 34453 356766 4 356789999999886543 67899999999873 78887776 3678899997 99 6
Q ss_pred eeccC---CeEEEEeCCcccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCc-hh---HHH-HH
Q psy16770 208 ALLTD---GRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLP-VR---LRY-LI 279 (554)
Q Consensus 208 ~~~~~---g~~~~y~~g~~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~-~~---~~~-~~ 279 (554)
++... +....|.|+..+.++|.+|+.....|. +..+|.+++.+++. ...+.+++|..... .. +.. ..
T Consensus 186 ~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~-v~elt~~~~~~~~~----~~~~~~v~f~~~~~~~~~~~~~~~~~ 260 (382)
T 2r2j_A 186 IYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPL-VREITFENGEELTE----EGLPFLILFHMKEDTESLEIFQNEVA 260 (382)
T ss_dssp EEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCS-SEECCHHHHHHHHT----TCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred EECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCc-eEecChhhHHHHhc----CCCcEEEEEecCCchHHHHHHHHHHH
Confidence 55553 235677776548899999999887766 77888988888763 45566565554332 21 211 12
Q ss_pred H-hhccCCceEEEEEEccCCCChhHHhHhCCCC-CCceEEEEeCCCCCCCceee---cCCCChhHHHhHHhcC
Q psy16770 280 N-AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPG-DKDSLLIFKEDKDRPSASIT---MNSIPVPTLQDITDNN 347 (554)
Q Consensus 280 ~-a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~-~~Ptlvvfk~~~~~~~~~i~---~~~~~~~~l~~fi~~~ 347 (554)
. +..+++.+.|++++++ ....+++.|+++. +.|+++++... . . ..+ .+.++.+.|.+|++..
T Consensus 261 ~~~~~~~~~i~f~~id~~--~~~~~~~~~gl~~~~~P~i~i~~~~-~-~--y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 261 RQLISEKGTINFLHADCD--KFRHPLLHIQKTPADCPVIAIDSFR-H-M--YVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp HHTGGGTTTSEEEEEETT--TTHHHHHHTTCCGGGCSEEEEECSS-C-E--EECCCSGGGGSTTHHHHHHHHH
T ss_pred HHHHHhCCeeEEEEEchH--HhHHHHHHcCCCccCCCEEEEEcch-h-c--CCCCccccccCHHHHHHHHHHH
Confidence 2 2256789999999987 5677889999973 48999887542 1 1 111 2234557788888753
No 214
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.74 E-value=9e-09 Score=92.35 Aligned_cols=98 Identities=15% Similarity=0.155 Sum_probs=72.8
Q ss_pred ccccccc-CCCCCCcEEEEEEcccccccccchHHH---HHHHHHhCCCCEEEEEEEecC--cHHHHHHhCCcCCCCccee
Q psy16770 136 NFEKNYI-PKSYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHN--EQGLARRLGVGSQLPQIAL 209 (554)
Q Consensus 136 ~F~~~v~-~~~~~~~~lV~Fya~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~~~--~~~l~~~~~v~~~~Pti~~ 209 (554)
+|++.+. .+..+++++|.||++||..|+.|.... .++++.++. ++.+.++|.+. ...++++|++.+ +|++++
T Consensus 30 ~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~~~y~v~~-~P~~~f 107 (153)
T 2dlx_A 30 SFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYIQFYKLGD-FPYVSI 107 (153)
T ss_dssp CHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHHHHHTCCS-SSEEEE
T ss_pred CHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHHHHcCCCC-CCEEEE
Confidence 4444432 234588999999999999999997543 445555543 48999999876 456899999998 999999
Q ss_pred c-cC-CeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 210 L-TD-GRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 210 ~-~~-g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+ .+ |+.+...+| .+++++++++.+.+
T Consensus 108 ld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 108 LDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp ECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred EeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 9 44 666555567 69999988887653
No 215
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.74 E-value=1.8e-08 Score=91.58 Aligned_cols=90 Identities=19% Similarity=0.146 Sum_probs=73.4
Q ss_pred CCCcEEEEEEcccccc-cccchHHHHHHHHHhCC----CCEEEEEEEecCc----------------------------H
Q psy16770 146 YTTPHLILFYSDWCFA-CLQVEPIFKKLMDELSP----LGVGFFTVHVHNE----------------------------Q 192 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~-C~~l~p~~~~~a~~l~~----~~v~~~~Vd~~~~----------------------------~ 192 (554)
.+++++|.||++||++ |....|.++++.+.++. .++.+..|+++.+ .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3579999999999998 99999999999999852 3699999988731 2
Q ss_pred HHHHHhCCcCCCC---------------cceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 193 GLARRLGVGSQLP---------------QIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 193 ~l~~~~~v~~~~P---------------ti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
.+++.|||.. .| +++++ ++|+++..+.|..+.+.|.+.+++.+
T Consensus 105 ~~~~~~~v~~-~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 105 QASHSYRVYY-NAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp HHHHHSCCCC-EECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhCeEE-EecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 6889999996 88 65555 88998877777778889988887664
No 216
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.73 E-value=2.7e-08 Score=90.83 Aligned_cols=90 Identities=12% Similarity=0.039 Sum_probs=69.2
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------cHHHH-------------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------EQGLA------------------- 195 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------~~~l~------------------- 195 (554)
.+++++|.||++||+.|+ ..|.++++.+++++.++.+..|+++. ....+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 357999999999999999 99999999999987679999998741 11222
Q ss_pred -----------HHhCCcCCCC------cceec-cCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 196 -----------RRLGVGSQLP------QIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 196 -----------~~~~v~~~~P------ti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
+.+++.+ +| +++++ ++|+++....|..+.+.|.+.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~-~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLG-LRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TBCHHHHHHHHHSCCSSS-CCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred cchHHHHHHHhccCCcCC-CCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 2367887 99 66666 899988777666677888888877653
No 217
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.72 E-value=7.7e-09 Score=108.13 Aligned_cols=67 Identities=42% Similarity=0.725 Sum_probs=57.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChh----HHHHHHHHHHHHHHcCChHHHHhhhc
Q psy16770 16 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSDAERRKQYDL 82 (554)
Q Consensus 16 ~~~~d~y~~Lgv~~~a~~~~ik~ay~~l~~~~hPd~~~~~~----~~~~~~~i~~Ay~~L~~~~~r~~yd~ 82 (554)
....+.|++||+.+.++.++|+++|+++++++|||+.+.+. +.++|..|.+||++|+||++|+.||+
T Consensus 379 ~~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 379 SQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp HHSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred ccchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 34569999999999999999999999999999999998644 78899999999999999999999997
No 218
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.70 E-value=2.6e-08 Score=90.43 Aligned_cols=91 Identities=14% Similarity=0.151 Sum_probs=71.5
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC--------c---HHHHH-Hh---------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--------E---QGLAR-RL--------------- 198 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~--------~---~~l~~-~~--------------- 198 (554)
.+++++|.||++||++|+...|.++++++++++.++.+..|+++. . .+.++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 357999999999999999999999999999987679999999852 1 23344 43
Q ss_pred --------------CC--cCCCC---cceec-cCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 199 --------------GV--GSQLP---QIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 199 --------------~v--~~~~P---ti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
++ .+ +| +++++ ++|+++..+.|..+.+.|.+.+++.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~-~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDD-IQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSC-CCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred chHHHHHHHHhcCCCccCCc-ccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 44 55 78 66666 889988777676677888888887764
No 219
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.70 E-value=4.6e-08 Score=91.01 Aligned_cols=90 Identities=17% Similarity=0.129 Sum_probs=71.4
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC--------c---HHHH-HH----------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--------E---QGLA-RR---------------- 197 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~--------~---~~l~-~~---------------- 197 (554)
.++++||.||++||+.|+...|.++++.+++++.++.+..|+++. . .+.+ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 357999999999999999999999999999987679999999872 1 2233 33
Q ss_pred -------------hCCcCCCC------cceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 198 -------------LGVGSQLP------QIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 198 -------------~~v~~~~P------ti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+++.+ +| +++++ ++|+++....|..+.+.|.+.+.+.+
T Consensus 127 ~~~~~~~~l~~~~~~v~~-~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILK-TKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLL 184 (190)
T ss_dssp TBCHHHHHHHHHSCCGGG-CCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCC-CccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 37776 88 65555 88998887767668889988888765
No 220
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.69 E-value=3.8e-08 Score=88.93 Aligned_cols=87 Identities=13% Similarity=0.140 Sum_probs=69.4
Q ss_pred CCc-EEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEec---------------------CcHHHHHHhCCcCC
Q psy16770 147 TTP-HLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH---------------------NEQGLARRLGVGSQ 203 (554)
Q Consensus 147 ~~~-~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~---------------------~~~~l~~~~~v~~~ 203 (554)
+++ ++|.|| ++||++|....|.+.++++++++.++.+..|+++ .+..+++.||+. +
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-~ 106 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAK-G 106 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCC-C
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCC-C
Confidence 345 999999 9999999999999999999998778999999987 467899999998 6
Q ss_pred ----CCcceec-cCCeEEEEeCC-c---ccHHHHHHHHHH
Q psy16770 204 ----LPQIALL-TDGRTSFFKEP-S---FSVQKMVEFFRL 234 (554)
Q Consensus 204 ----~Pti~~~-~~g~~~~y~~g-~---~~~~~i~~fl~~ 234 (554)
+|+++++ ++|++.....| . ...+++++.+.+
T Consensus 107 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHH
T ss_pred cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHH
Confidence 8988888 78988655544 2 234455555544
No 221
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.69 E-value=2.6e-08 Score=107.74 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=79.4
Q ss_pred ccccccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcce
Q psy16770 129 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208 (554)
Q Consensus 129 ~~~Lt~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~ 208 (554)
...++.+.++.... ......++.||++||++|+.+.|.+++++.++. ++.+.+||.+.+++++++|+|.+ +||++
T Consensus 101 ~~~~~~~~~~~i~~--~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~~~~~~~~i~s-vPt~~ 175 (521)
T 1hyu_A 101 PSKEAQSLLEQIRD--IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQNEITERNVMG-VPAVF 175 (521)
T ss_dssp CCCSCHHHHHHHHH--CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred CCCCCHHHHHHHHh--cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhHHHHHHhCCCc-cCEEE
Confidence 34566666655431 235567889999999999999999999998875 59999999999999999999997 99997
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
+ +|+.+.. |..+.+.|.+++.+.
T Consensus 176 i--~g~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 176 V--NGKEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp E--TTEEEEE--SCCCHHHHHHHHCCS
T ss_pred E--CCEEEec--CCCCHHHHHHHHhhc
Confidence 7 8887644 556889999998654
No 222
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.69 E-value=3.3e-08 Score=86.50 Aligned_cols=128 Identities=13% Similarity=0.092 Sum_probs=90.4
Q ss_pred CCCcccccccchhhhhhcCCCCceEEEEEcCCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCCC
Q psy16770 347 NPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDS 426 (554)
Q Consensus 347 ~~~~~v~~lt~~~~~~~~c~~~~lcvvl~~~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~~ 426 (554)
.+.|++.++|.+++.+.. ......++.|......+......|+++|++ |++ +++|+++|.++.+++++.| |.
T Consensus 3 c~~plv~~~t~~~f~~~~-~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~--~~g-k~~f~~vd~d~~~~~a~~~----gi 74 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYM-SAGIPLAYIFAETAEERKELSDKLKPIAEA--QRG-VINFGTIDAKAFGAHAGNL----NL 74 (133)
T ss_dssp CSCCCSEECCHHHHHHHH-HTTSCEEEEECSCSSSHHHHHHHHHHHHHS--STT-TSEEEEECTTTTGGGTTTT----TC
T ss_pred cccCceeccChHHHHHHh-cCCCCEEEEEecChhhHHHHHHHHHHHHHH--hCC-eEEEEEEchHHhHHHHHHc----CC
Confidence 457888888877664332 122334555554455667788999999999 875 5999999999888877777 21
Q ss_pred ccccceEEEEEEecC-CCeeEEEec-CCCCCcccccchhhHHHHHHHHhhhcCCCCCccccccccchhh
Q psy16770 427 SEISLHIAAMWRMDY-KKIKYGWLL-GDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISD 493 (554)
Q Consensus 427 ~~~~~~~~~v~~~~~-~~~ky~~~~-~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~~~~~~~~lp~~~d 493 (554)
.. ..+|.+...+. .+.+|.+.. | ..+++.|.+||++++.|+..|..+++++|+-||
T Consensus 75 ~~--~~iPtl~i~~~~~g~~~~~~~~g---------~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~~~ 132 (133)
T 2djk_A 75 KT--DKFPAFAIQEVAKNQKFPFDQEK---------EITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQE 132 (133)
T ss_dssp CS--SSSSEEEEECTTTCCBCCCCSSS---------CCCHHHHHHHHHHHHHTCCCCSSCCCCCCTTSC
T ss_pred Cc--ccCCEEEEEecCcCcccCCCCcc---------ccCHHHHHHHHHHHHcCCcCccccCCCCCCcCC
Confidence 11 13554444442 456674322 4 368899999999999999999999999999765
No 223
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.69 E-value=9.6e-09 Score=77.28 Aligned_cols=53 Identities=11% Similarity=0.087 Sum_probs=46.9
Q ss_pred CcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCChH
Q psy16770 20 DPYETLGVPRT---ASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAE 75 (554)
Q Consensus 20 d~y~~Lgv~~~---a~~~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~L~~~~ 75 (554)
..|.||||+++ ++.++|+++||+|...+|||+. +......+|++|+++|....
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~~~ 60 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKWEL 60 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHHHH
Confidence 46889999999 9999999999999999999997 44578899999999997653
No 224
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.68 E-value=2e-08 Score=80.20 Aligned_cols=74 Identities=20% Similarity=0.394 Sum_probs=60.5
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcH----HHHHHhC--CcCCCCcceeccCCeEEEEeCCccc
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ----GLARRLG--VGSQLPQIALLTDGRTSFFKEPSFS 224 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~----~l~~~~~--v~~~~Pti~~~~~g~~~~y~~g~~~ 224 (554)
++.|+++||++|+++.+.+++++.+.. ++.+..+|.+.++ ++++++| +.+ +|++ |.+|+.+ +|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~~~~~~~~~l~~~~~~~~~~-vP~i--~~~g~~i---~~~-- 72 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIRAEGITKEDLQQKAGKPVET-VPQI--FVDQQHI---GGY-- 72 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHHHHTCCSHHHHHHTCCCSCC-SCEE--EETTEEE---ESS--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecccChHHHHHHHHHhCCCCce-eCeE--EECCEEE---ECH--
Confidence 677999999999999999999998865 4899999988764 8999999 997 9998 4578654 342
Q ss_pred HHHHHHHHHHh
Q psy16770 225 VQKMVEFFRLK 235 (554)
Q Consensus 225 ~~~i~~fl~~~ 235 (554)
++|.+++.+.
T Consensus 73 -~~l~~~~~~~ 82 (85)
T 1ego_A 73 -TDFAAWVKEN 82 (85)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHh
Confidence 6888887764
No 225
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.68 E-value=9.6e-08 Score=88.64 Aligned_cols=92 Identities=17% Similarity=0.143 Sum_probs=70.7
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC--------cHHHHH----H----------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--------EQGLAR----R---------------- 197 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~--------~~~l~~----~---------------- 197 (554)
.++++||.||++||++|+...|.++++.+++++.++.+..|+++. ...+.+ +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 357999999999999999999999999999987679999998762 122221 1
Q ss_pred ----------------hCCcCCCC---cceec-cCCeEEEEeCCcccHHHHHHHHHHhCCC
Q psy16770 198 ----------------LGVGSQLP---QIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 238 (554)
Q Consensus 198 ----------------~~v~~~~P---ti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~~~ 238 (554)
+++.+ +| +++++ ++|+++..+.|..+.+.|.+.|++.+..
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~-iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKA-IKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSS-CCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred chhHHHHHHHhhcCCccCCCc-cccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 13343 66 77676 8999888777777889999999888754
No 226
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.66 E-value=2.5e-08 Score=89.93 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=73.1
Q ss_pred CCcEEEEEEcccccc-cccchHHHHHHHHHhCC----CCEEEEEEEecCc----------------------------HH
Q psy16770 147 TTPHLILFYSDWCFA-CLQVEPIFKKLMDELSP----LGVGFFTVHVHNE----------------------------QG 193 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~-C~~l~p~~~~~a~~l~~----~~v~~~~Vd~~~~----------------------------~~ 193 (554)
+++++|.||++||++ |....|.++++.++++. .++.+..|+++.+ ..
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 579999999999998 99999999999998864 3689999988752 24
Q ss_pred HHHHhCCcCCCC---------------cceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 194 LARRLGVGSQLP---------------QIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 194 l~~~~~v~~~~P---------------ti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+++.|||.+ .| +++++ ++|+.+..+.|..+.++|.+.+++.+
T Consensus 103 ~~~~~~v~~-~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 103 VARAYRVYY-SPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHTTTCCE-EEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHhcCeEE-EecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 888999997 99 55555 88998877777778889988887764
No 227
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.64 E-value=3.6e-08 Score=92.41 Aligned_cols=90 Identities=16% Similarity=0.275 Sum_probs=74.3
Q ss_pred CCCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHH
Q psy16770 146 YTTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLAR 196 (554)
Q Consensus 146 ~~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~ 196 (554)
.+++++|.|| ++||++|+...|.+.++++++++.++.+..|+++. +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3568999999 99999999999999999999876679999998864 457899
Q ss_pred HhCCc-----CCCCcceec-cCCeEEEEeCCc----ccHHHHHHHHHHhC
Q psy16770 197 RLGVG-----SQLPQIALL-TDGRTSFFKEPS----FSVQKMVEFFRLKL 236 (554)
Q Consensus 197 ~~~v~-----~~~Pti~~~-~~g~~~~y~~g~----~~~~~i~~fl~~~~ 236 (554)
.|++. + +|+++++ ++|++.....|. .+.++|.+.+.+..
T Consensus 112 ~~~v~~~~g~~-~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIA-LRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEE-CEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCcc-cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99998 8 9999888 789886655332 26788888887653
No 228
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.64 E-value=5e-08 Score=91.17 Aligned_cols=90 Identities=17% Similarity=0.313 Sum_probs=75.0
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------------------------cHHHHHHhCC
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 200 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------------------------~~~l~~~~~v 200 (554)
+++++|.|| ++||++|+...|.+.+++++++..++.+..|+++. +..+++.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 568999999 99999999999999999999987679999998864 4578999999
Q ss_pred c-----CCCCcceec-cCCeEEEEeCCc----ccHHHHHHHHHHhCC
Q psy16770 201 G-----SQLPQIALL-TDGRTSFFKEPS----FSVQKMVEFFRLKLP 237 (554)
Q Consensus 201 ~-----~~~Pti~~~-~~g~~~~y~~g~----~~~~~i~~fl~~~~~ 237 (554)
. + +|+++++ ++|+++....|. .+.++|.+.+++...
T Consensus 125 ~~~~g~~-~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 125 LNADGVA-DRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp BCTTSSB-CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred cccCCCc-cceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 9 8 9999888 789886655332 267889888887654
No 229
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.63 E-value=6.5e-08 Score=87.62 Aligned_cols=90 Identities=13% Similarity=0.067 Sum_probs=67.8
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC--------c---HHH-HHHh---------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--------E---QGL-ARRL--------------- 198 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~--------~---~~l-~~~~--------------- 198 (554)
.+++++|.||++||++|+...|.++++.+++++.++.+..|+++. . ... .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 357999999999999999999999999999987679999999863 1 223 2333
Q ss_pred --------------C-----CcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 199 --------------G-----VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 199 --------------~-----v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
| |+. +|+++++ ++|+++..+.|..+.+.|.+.+++.+
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKW-NFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCS-TTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccc-cceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHh
Confidence 3 332 4776666 78988777766667777887777654
No 230
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.63 E-value=3.5e-08 Score=91.52 Aligned_cols=89 Identities=19% Similarity=0.315 Sum_probs=73.4
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------------------------cHHHHHHhCC
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 200 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------------------------~~~l~~~~~v 200 (554)
+++++|.|| ++||++|....|.+.+++++++..++.+..|+++. +..+++.|++
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 110 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDV 110 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCC
Confidence 478999999 99999999999999999999986579999998874 4578999999
Q ss_pred c------CCCCcceec-cCCeEEEEeCCc----ccHHHHHHHHHHhC
Q psy16770 201 G------SQLPQIALL-TDGRTSFFKEPS----FSVQKMVEFFRLKL 236 (554)
Q Consensus 201 ~------~~~Pti~~~-~~g~~~~y~~g~----~~~~~i~~fl~~~~ 236 (554)
. + +|+++++ ++|++.....|. ++.++|.+.+++..
T Consensus 111 ~~~~~g~~-~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 111 LNEETGLA-DRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp EETTTTEE-CEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CcCCCCce-eeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 8 8 9999999 789886654332 25678888877654
No 231
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.63 E-value=6e-08 Score=87.22 Aligned_cols=86 Identities=10% Similarity=0.147 Sum_probs=68.3
Q ss_pred CcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------------------cHHHHHHhCCc--
Q psy16770 148 TPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARRLGVG-- 201 (554)
Q Consensus 148 ~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------------------~~~l~~~~~v~-- 201 (554)
++++|.|| ++||++|+...|.+.++++++++.++.+..|+++. +..+++.||+.
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~ 116 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNE 116 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEET
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccc
Confidence 48999998 99999999999999999999987679999998864 67799999998
Q ss_pred --CCCC--cceec-cCCeEEEEeCCcc----cHHHHHHHHHH
Q psy16770 202 --SQLP--QIALL-TDGRTSFFKEPSF----SVQKMVEFFRL 234 (554)
Q Consensus 202 --~~~P--ti~~~-~~g~~~~y~~g~~----~~~~i~~fl~~ 234 (554)
+ +| +++++ ++|+++....|.. ..+++++.+.+
T Consensus 117 ~~~-~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 117 QAG-IANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTT-EECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred cCC-CeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 8 99 55555 8898866554432 34566666554
No 232
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.61 E-value=5.9e-08 Score=89.56 Aligned_cols=90 Identities=17% Similarity=0.180 Sum_probs=69.3
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------c----HHHHHH-hC--------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------E----QGLARR-LG-------------- 199 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------~----~~l~~~-~~-------------- 199 (554)
.+++++|.||++||++|+...|.++++++++++.++.+..|+++. . .+.+++ ++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 357999999999999999999999999999987679999999863 1 233444 32
Q ss_pred ---------CcCCCC-------cceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 200 ---------VGSQLP-------QIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 200 ---------v~~~~P-------ti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+.+ +| +.+++ ++|+++..+.|..+.++|.+.+++.+
T Consensus 128 ~~~~~~~~~~~~-~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 128 GAHPAFKYLAQT-SGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TSCHHHHHHHHH-HSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cchhhhhhhhhc-CCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 444 67 54444 88998877767668888988887654
No 233
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.56 E-value=1.2e-07 Score=87.53 Aligned_cols=89 Identities=9% Similarity=-0.024 Sum_probs=66.8
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------c----HHHHHHh----------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------E----QGLARRL---------------- 198 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------~----~~l~~~~---------------- 198 (554)
.+++++|.||++||+.|+...|.++++++++++.++.+..|+++. . ...++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 357999999999999999999999999999987679999998762 1 1222222
Q ss_pred ---------------C-----CcCCCCcceec-cCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 199 ---------------G-----VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 199 ---------------~-----v~~~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
+ |+. .|+++++ ++|+++..+.|..+.++|.+.+++.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKW-NFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCS-TTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred hhHHHHHhhccCCCCCcccccccc-cceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 3 232 4887777 8899877776666777877766554
No 234
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.52 E-value=2e-07 Score=85.78 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=66.8
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------cHHHHHH-hCCcC-----------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------EQGLARR-LGVGS----------- 202 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------~~~l~~~-~~v~~----------- 202 (554)
.++++||.||++||++|+...|.++++++++++.++.+..|+++. ....+++ +++..
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 356999999999999999999999999999998789999998753 2355666 66531
Q ss_pred --------------CCCc-----ceeccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 203 --------------QLPQ-----IALLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 203 --------------~~Pt-----i~~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
..|+ +++-++|+++..+.|..+.+.+.+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 168 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAAL 168 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Confidence 0454 34448898887776665666666666544
No 235
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.50 E-value=1.6e-07 Score=87.90 Aligned_cols=89 Identities=17% Similarity=0.253 Sum_probs=72.2
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
+++++|.|| ++||++|....|.+.+++++++..++.+..|+++. +..+++.
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 113 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHH
Confidence 468999999 99999999999999999999976679999998874 3478999
Q ss_pred hCCc------CCCCcceec-cCCeEEEEeCC----cccHHHHHHHHHHhC
Q psy16770 198 LGVG------SQLPQIALL-TDGRTSFFKEP----SFSVQKMVEFFRLKL 236 (554)
Q Consensus 198 ~~v~------~~~Pti~~~-~~g~~~~y~~g----~~~~~~i~~fl~~~~ 236 (554)
|++. + +|+++++ ++|++.....| .++.+++.+.+....
T Consensus 114 ~gv~~~~~~~~-~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 114 YGVLKTDEGIA-YRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TTCEETTTTEE-CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCce-eeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 9998 7 9988877 78887555322 245688888887653
No 236
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.50 E-value=1.9e-07 Score=86.48 Aligned_cols=90 Identities=8% Similarity=-0.103 Sum_probs=66.2
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------cHHHHHHhCCc-------------
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------EQGLARRLGVG------------- 201 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------~~~l~~~~~v~------------- 201 (554)
.+++++|.||++||+.|+...|.++++.+++++.++.+..|+++. -.+.++++++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 127 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChh
Confidence 357999999999999999999999999999987679999998863 13345555432
Q ss_pred ------------------C----CCCcceec-cCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 202 ------------------S----QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 202 ------------------~----~~Pti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
+ ..|+.+++ ++|+++..+.|..+.++|.+.+++.
T Consensus 128 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 128 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp BCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 0 03666666 7888877666655666776666554
No 237
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.48 E-value=2.1e-07 Score=88.10 Aligned_cols=44 Identities=14% Similarity=0.055 Sum_probs=40.2
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH 189 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~ 189 (554)
.++++||.|||+||+.|+...|.++++++++++.++.+..|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 35699999999999999999999999999998767999999986
No 238
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.47 E-value=1.7e-07 Score=89.15 Aligned_cols=84 Identities=17% Similarity=0.254 Sum_probs=62.2
Q ss_pred CCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEE-----------------------------------
Q psy16770 143 PKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH----------------------------------- 187 (554)
Q Consensus 143 ~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd----------------------------------- 187 (554)
.....+++++.|+++||++|+++.|.++++++. ++.+..++
T Consensus 82 g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 157 (216)
T 1eej_A 82 KAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKS 157 (216)
T ss_dssp CCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCC
T ss_pred cCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCC
Confidence 334567899999999999999999999988762 35544332
Q ss_pred -----e----cCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 188 -----V----HNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 188 -----~----~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
| +.+..+++++||++ +||+ ++.+|.. .. |..+.+.|.+++.+.
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~g-tPt~-v~~dG~~--~~-G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 158 VAPASCDVDIADHYALGVQLGVSG-TPAV-VLSNGTL--VP-GYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCCCCSCCHHHHHHHHHHHTCCS-SSEE-ECTTSCE--EE-SCCCHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHcCCCc-cCEE-EEcCCeE--ec-CCCCHHHHHHHHHHh
Confidence 2 23567899999998 9999 5667753 23 445778898888754
No 239
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.44 E-value=3.8e-07 Score=83.42 Aligned_cols=85 Identities=13% Similarity=0.183 Sum_probs=65.7
Q ss_pred CCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe-----------------------------------
Q psy16770 144 KSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV----------------------------------- 188 (554)
Q Consensus 144 ~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~----------------------------------- 188 (554)
....++.+++|+++||++|+++.|.++++.++... +++..++.
T Consensus 19 ~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~ 96 (175)
T 3gyk_A 19 NPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSG 96 (175)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSS
T ss_pred CCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Confidence 34567899999999999999999999999888653 66666552
Q ss_pred ----------------------------------cCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHH
Q psy16770 189 ----------------------------------HNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRL 234 (554)
Q Consensus 189 ----------------------------------~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~ 234 (554)
..+..+++++||.| +||+++ +|+ ...|..+.+.+.+.+.+
T Consensus 97 ~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g-tPt~~i--~g~---~~~G~~~~~~l~~~i~~ 170 (175)
T 3gyk_A 97 KANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNG-TPSFVV--EDA---LVPGFVEQSQLQDAVDR 170 (175)
T ss_dssp CCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCS-SSEEEE--TTE---EECSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCcc-CCEEEE--CCE---EeeCCCCHHHHHHHHHH
Confidence 23456788999998 999987 675 33355688899888876
Q ss_pred hC
Q psy16770 235 KL 236 (554)
Q Consensus 235 ~~ 236 (554)
.+
T Consensus 171 ~l 172 (175)
T 3gyk_A 171 AR 172 (175)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 240
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.43 E-value=3.4e-07 Score=85.16 Aligned_cols=88 Identities=20% Similarity=0.333 Sum_probs=71.6
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
+++++|.|| ++||++|....|.+.++++++++.++.+..|+++. +..+++.
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 110 (192)
T 2h01_A 31 KKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARS 110 (192)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHH
Confidence 568999999 99999999999999999999975579999998763 3478999
Q ss_pred hCCc-----CCCCcceec-cCCeEEEEeCC----cccHHHHHHHHHHh
Q psy16770 198 LGVG-----SQLPQIALL-TDGRTSFFKEP----SFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~-----~~~Pti~~~-~~g~~~~y~~g----~~~~~~i~~fl~~~ 235 (554)
||+. . +|+++++ ++|++.....| .++.+++.+.++..
T Consensus 111 ~gv~~~~g~~-~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 111 YDVLFNESVA-LRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp TTCEETTTEE-CCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred hCCcCcCCce-eeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 9999 8 9999999 78987655433 23567888777654
No 241
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.42 E-value=2.8e-07 Score=86.53 Aligned_cols=89 Identities=13% Similarity=0.255 Sum_probs=72.3
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
+++++|.|| ++||++|....|.+.+++++++..++.+..|+++. +..+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 468999999 99999999999999999999977679999998864 3578999
Q ss_pred hCCc------CCCCcceec-cCCeEEEEeCC----cccHHHHHHHHHHhC
Q psy16770 198 LGVG------SQLPQIALL-TDGRTSFFKEP----SFSVQKMVEFFRLKL 236 (554)
Q Consensus 198 ~~v~------~~~Pti~~~-~~g~~~~y~~g----~~~~~~i~~fl~~~~ 236 (554)
||+. + +|+++++ ++|++.....| .++.++|.+.++...
T Consensus 116 ygv~~~~~g~~-~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 YGVLKEEDGVA-YRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HTCEETTTTEE-CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCce-eeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 9999 8 9998888 78887655322 235688888777553
No 242
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.39 E-value=4.2e-07 Score=86.69 Aligned_cols=89 Identities=18% Similarity=0.319 Sum_probs=72.3
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
+++++|.|| ++||+.|....|.+++++++++..++.+..|+++. +..+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 478999999 99999999999999999999976579999998763 3578999
Q ss_pred hCCc------CCCCcceec-cCCeEEEEeCC----cccHHHHHHHHHHhC
Q psy16770 198 LGVG------SQLPQIALL-TDGRTSFFKEP----SFSVQKMVEFFRLKL 236 (554)
Q Consensus 198 ~~v~------~~~Pti~~~-~~g~~~~y~~g----~~~~~~i~~fl~~~~ 236 (554)
||+. + +|+++++ ++|++.....+ .++.+++.+.++...
T Consensus 136 ygv~~~~~g~~-~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 136 YGVLLEGPGLA-LRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp TTCEETTTTEE-CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred hCCeecCCCcc-cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 9998 8 9999999 78887654322 246688888877654
No 243
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.39 E-value=3.6e-07 Score=86.63 Aligned_cols=82 Identities=15% Similarity=0.235 Sum_probs=61.6
Q ss_pred CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe------------------------------------
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV------------------------------------ 188 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~------------------------------------ 188 (554)
...+++++.|+++||++|+++.|.++++.+. ++.+..+..
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~ 159 (211)
T 1t3b_A 84 KNEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPK 159 (211)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCS
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCC
Confidence 3567899999999999999999999987652 344443221
Q ss_pred --------cCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 189 --------HNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 189 --------~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
+.+..+++++||+| +||+++ .+|+ ...|..+.+.|.+++.+.
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~g-TPt~vi-~nG~---~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 160 EVKTPNIVKKHYELGIQFGVRG-TPSIVT-STGE---LIGGYLKPADLLRALEET 209 (211)
T ss_dssp SCCCSSHHHHHHHHHHHHTCCS-SCEEEC-TTSC---CCCSCCCHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHcCCCc-CCEEEE-eCCE---EecCCCCHHHHHHHHHhc
Confidence 13467889999998 999988 7886 234556889999888653
No 244
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.33 E-value=1.7e-06 Score=78.56 Aligned_cols=91 Identities=14% Similarity=0.100 Sum_probs=67.6
Q ss_pred CCCcEEEEEEccccc-ccccchHHHHHHHHHhCCCC--EEEEEEEecC----------------------------cHHH
Q psy16770 146 YTTPHLILFYSDWCF-ACLQVEPIFKKLMDELSPLG--VGFFTVHVHN----------------------------EQGL 194 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~-~C~~l~p~~~~~a~~l~~~~--v~~~~Vd~~~----------------------------~~~l 194 (554)
.+++++|.||++||+ +|....|.+.++.+.++..+ +.+..|+++. +..+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 357899999999999 99999999999999887544 8999998762 1223
Q ss_pred HHHh----------------CCcCCCCcceec-cCCeEEEEeCCcc--cHHHHHHHHHHhCC
Q psy16770 195 ARRL----------------GVGSQLPQIALL-TDGRTSFFKEPSF--SVQKMVEFFRLKLP 237 (554)
Q Consensus 195 ~~~~----------------~v~~~~Pti~~~-~~g~~~~y~~g~~--~~~~i~~fl~~~~~ 237 (554)
++.+ ++.+ .|+++++ ++|+++..+.|.. +.++|.+.+++.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIH-QSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCS-CCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeee-eeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 3333 3455 7876666 8898876655543 46889998887754
No 245
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.32 E-value=6.1e-07 Score=85.14 Aligned_cols=90 Identities=19% Similarity=0.302 Sum_probs=71.1
Q ss_pred CCCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHH
Q psy16770 146 YTTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLAR 196 (554)
Q Consensus 146 ~~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~ 196 (554)
.+++++|.|| ++||+.|....|.+.+++++++..++.+..|+++. +..+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 3568999999 99999999999999999999975578998888754 356899
Q ss_pred HhCCc-----CCCCcceec-cCCeEEEEe-CC---cccHHHHHHHHHHhC
Q psy16770 197 RLGVG-----SQLPQIALL-TDGRTSFFK-EP---SFSVQKMVEFFRLKL 236 (554)
Q Consensus 197 ~~~v~-----~~~Pti~~~-~~g~~~~y~-~g---~~~~~~i~~fl~~~~ 236 (554)
+||+. . +|+++++ ++|++.... +. .++.+++.+.++...
T Consensus 131 ~ygv~~~~g~~-~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVS-LRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEE-CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCc-ccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99998 7 9988777 788875543 21 235788888777543
No 246
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.32 E-value=1e-06 Score=75.91 Aligned_cols=105 Identities=13% Similarity=0.115 Sum_probs=75.4
Q ss_pred HHHhCCCCccc-cC-CcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhhccCCceEEEEEEccCCCChhHHhHhCC
Q psy16770 232 FRLKLPYKLIV-PL-SATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKV 309 (554)
Q Consensus 232 l~~~~~~~~v~-~~-t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i 309 (554)
++++.+|+... .+ |.+++++|+.. +..++|++|.+..++....+..++...+++.||.+ .++++++++++
T Consensus 13 m~kq~gP~~~~~~i~s~~e~e~fi~~---~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t-----~~~~v~~~~~v 84 (124)
T 2l4c_A 13 SSDGPGAAQEPTWLTDVPAAMEFIAA---TEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGIS-----TDSEVLTHYNI 84 (124)
T ss_dssp SCCCSCCSCCCEECCSHHHHHHHHHT---SSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEEEE-----CCHHHHHHTTC
T ss_pred HHhccCCCCcceEcCCHHHHHHHHhc---CCCEEEEEECCCCChhHHHHHHHHHhCCCceEEEE-----ChHHHHHHcCC
Confidence 34566666332 24 56889999953 34455556666566667777766633389999999 68999999999
Q ss_pred CCCCceEEEEeCCCCCCCceeecC----CCChhHHHhHHhcCC
Q psy16770 310 PGDKDSLLIFKEDKDRPSASITMN----SIPVPTLQDITDNNP 348 (554)
Q Consensus 310 ~~~~Ptlvvfk~~~~~~~~~i~~~----~~~~~~l~~fi~~~~ 348 (554)
+ .|++++|++..+... .+.+ +++...|.+||+.|.
T Consensus 85 ~--~~~vvlfkkfde~~~--~~~g~~~~~~~~~~L~~FI~~n~ 123 (124)
T 2l4c_A 85 T--GNTICLFRLVDNEQL--NLEDEDIESIDATKLSRFIEINS 123 (124)
T ss_dssp C--SSCEEEEETTTTEEE--EECHHHHTTCCHHHHHHHHHHHC
T ss_pred C--CCeEEEEEcCCCCce--eecCcccCCCCHHHHHHHHHHhc
Confidence 8 689999998665542 3443 789999999999775
No 247
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.32 E-value=3.5e-06 Score=81.27 Aligned_cols=148 Identities=11% Similarity=0.157 Sum_probs=90.3
Q ss_pred CCcEEEEEE-cccccccc-cchHHHHHHHHHhCCCCE-EEEEEEecC----------------------cHHHHHHhCCc
Q psy16770 147 TTPHLILFY-SDWCFACL-QVEPIFKKLMDELSPLGV-GFFTVHVHN----------------------EQGLARRLGVG 201 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~-~l~p~~~~~a~~l~~~~v-~~~~Vd~~~----------------------~~~l~~~~~v~ 201 (554)
+++++|.|| +.||++|. ...|.+.+++++++..|+ .+..|+.+. +..+++.||+.
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 112 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGML 112 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTCE
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCce
Confidence 468899999 99999999 999999999999876678 888887754 23567777765
Q ss_pred ------C----CCCcceeccCCeEEEEeCCc---------ccHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCce
Q psy16770 202 ------S----QLPQIALLTDGRTSFFKEPS---------FSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKV 262 (554)
Q Consensus 202 ------~----~~Pti~~~~~g~~~~y~~g~---------~~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~ 262 (554)
| ..|+..++++|++....-+. .+.+++.+.+.... ....
T Consensus 113 ~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~----------------------i~~~ 170 (241)
T 1nm3_A 113 VGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH----------------------QVQE 170 (241)
T ss_dssp EECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS----------------------CCCC
T ss_pred eecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc----------------------cccc
Confidence 1 03655444888765443222 24455544443211 0122
Q ss_pred EEEEEecCCchhHHHHHHhhccCCceEEEEEEccCCCC-hhHHhHhCCCCCCceEEE
Q psy16770 263 HALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDS-SSVFQRFKVPGDKDSLLI 318 (554)
Q Consensus 263 ~v~~f~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~-~~l~~k~~i~~~~Ptlvv 318 (554)
.+.+|....-+........+. ...+.|-.++.+.... +++.+.++... .|.|++
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~-~~~i~~~~~~i~~~~~~~~l~~~~g~~~-vP~~~~ 225 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLH-DKGLSFEEIILGHDATIVSVRAVSGRTT-VPQVFI 225 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHH-HHTCCCEEEETTTTCCHHHHHHHTCCSS-SCEEEE
T ss_pred eEEEEECCCChHHHHHHHHHH-HcCCceEEEECCCchHHHHHHHHhCCCC-cCEEEE
Confidence 345555444444443333332 1245666777764322 45777788765 898764
No 248
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.31 E-value=1.2e-06 Score=82.25 Aligned_cols=89 Identities=13% Similarity=0.126 Sum_probs=63.8
Q ss_pred CCcEEEEEEcccccc-cccchHHHHHHHHHhC---CCCEEEEEEEecC----------------------------cHHH
Q psy16770 147 TTPHLILFYSDWCFA-CLQVEPIFKKLMDELS---PLGVGFFTVHVHN----------------------------EQGL 194 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~-C~~l~p~~~~~a~~l~---~~~v~~~~Vd~~~----------------------------~~~l 194 (554)
++++||.||++||++ |....|.+.++.+.+. +.++.+..|+++. ...+
T Consensus 41 Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~ 120 (200)
T 2b7k_A 41 GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNA 120 (200)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHHH
Confidence 569999999999998 9999999999887775 2368888888763 1357
Q ss_pred HHHhCCc-CCCC---------------cceec-cCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 195 ARRLGVG-SQLP---------------QIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 195 ~~~~~v~-~~~P---------------ti~~~-~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
++.|||. + .| +++++ ++|+++....|..+.+.+.+.+.+.+
T Consensus 121 ~~~~gv~~~-~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l 178 (200)
T 2b7k_A 121 CKKYRVYFS-TPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHV 178 (200)
T ss_dssp HHHTTC---------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHH
T ss_pred HHHcCcEEe-eccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 8899987 3 44 44444 89998877766556566666655543
No 249
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.29 E-value=1.2e-06 Score=83.64 Aligned_cols=88 Identities=15% Similarity=0.295 Sum_probs=69.7
Q ss_pred CCCcEEEEEEc-ccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHH
Q psy16770 146 YTTPHLILFYS-DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLAR 196 (554)
Q Consensus 146 ~~~~~lV~Fya-~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~ 196 (554)
.++++||.||+ .||++|....|.++++++++++.++.+..|+++. +..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 35689999996 9999999999999999999987679999998874 236888
Q ss_pred HhCCc------CCCCcceec-cCCeEEEEeCCc----ccHHHHHHHHHH
Q psy16770 197 RLGVG------SQLPQIALL-TDGRTSFFKEPS----FSVQKMVEFFRL 234 (554)
Q Consensus 197 ~~~v~------~~~Pti~~~-~~g~~~~y~~g~----~~~~~i~~fl~~ 234 (554)
.|++. . +|+.+++ ++|+++....+. ...+++++.++.
T Consensus 148 ~ygv~~~~~g~~-~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNA-FRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSB-CEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCc-cceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 99998 7 8998888 788876554221 245677776654
No 250
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.28 E-value=1.9e-06 Score=78.00 Aligned_cols=86 Identities=14% Similarity=0.164 Sum_probs=66.7
Q ss_pred CCcEEEEEEccc-ccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------------------cHHHHHHhCCcC
Q psy16770 147 TTPHLILFYSDW-CFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARRLGVGS 202 (554)
Q Consensus 147 ~~~~lV~Fya~w-C~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------------------~~~l~~~~~v~~ 202 (554)
+++++|.||++| |++|+...|.++++++++ . ++.+..|+.+. +..+++.|++..
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 568999999999 999999999999999999 3 68888888763 357889999974
Q ss_pred CC------Ccceec-cCCeEEEEeCC-----cccHHHHHHHHHHh
Q psy16770 203 QL------PQIALL-TDGRTSFFKEP-----SFSVQKMVEFFRLK 235 (554)
Q Consensus 203 ~~------Pti~~~-~~g~~~~y~~g-----~~~~~~i~~fl~~~ 235 (554)
. |+.+++ ++|++.....| ..+.+++.+.+++.
T Consensus 122 -~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 122 -KELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp -TTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred -ccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 3 887777 78987665422 22447777777654
No 251
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.26 E-value=1.1e-06 Score=67.93 Aligned_cols=68 Identities=16% Similarity=0.353 Sum_probs=53.4
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHH---HhCCcCCCCcceeccCCeEEEEeCCcccHHH
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLAR---RLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 227 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~---~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~ 227 (554)
++.|+++||++|+++.+.+++. ++.+..+|.+.++.+.+ ++|+.+ +|++.. +|+. .+|. +.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~~~~~~~~~~~~~~~~~-vP~l~~--~g~~---~~g~-~~~~ 68 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDISLDDEARDYVMALGYVQ-APVVEV--DGEH---WSGF-RPER 68 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTCHHHHHHHHHTTCBC-CCEEEE--TTEE---EESC-CHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECCCCHHHHHHHHHcCCCc-cCEEEE--CCeE---EcCC-CHHH
Confidence 5679999999999998887753 47788899998877666 899997 999874 7764 3454 5678
Q ss_pred HHHHH
Q psy16770 228 MVEFF 232 (554)
Q Consensus 228 i~~fl 232 (554)
|.+++
T Consensus 69 l~~~l 73 (75)
T 1r7h_A 69 IKQLQ 73 (75)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87776
No 252
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.23 E-value=4.4e-07 Score=71.62 Aligned_cols=69 Identities=13% Similarity=0.264 Sum_probs=51.6
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHH---HhCCcCCCCcceeccCCeEEEEeCCcccHHH
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLAR---RLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 227 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~---~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~ 227 (554)
++.|+++||++|+++.+.+++. ++.+..+|++.++.+.+ ++|+.+ +|++ +.+|+. .+|. +.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~~~~~~~~~~~~~g~~~-vP~~--~~~g~~---~~g~-~~~~ 68 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------GFDFEMINVDRVPEAAEALRAQGFRQ-LPVV--IAGDLS---WSGF-RPDM 68 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTCHHHHHHHHHTTCCS-SCEE--EETTEE---EESC-CHHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------CCCeEEEECCCCHHHHHHHHHhCCCc-cCEE--EECCEE---EecC-CHHH
Confidence 5779999999999999888752 47788999998876654 589997 9998 347764 2453 5566
Q ss_pred HHHHHH
Q psy16770 228 MVEFFR 233 (554)
Q Consensus 228 i~~fl~ 233 (554)
|.+++.
T Consensus 69 l~~~l~ 74 (81)
T 1h75_A 69 INRLHP 74 (81)
T ss_dssp HGGGSC
T ss_pred HHHHHh
Confidence 666554
No 253
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.22 E-value=4.7e-06 Score=76.20 Aligned_cols=87 Identities=13% Similarity=0.176 Sum_probs=64.4
Q ss_pred CCcEEEEEEccc-ccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------cHHHHHHhCCcCC
Q psy16770 147 TTPHLILFYSDW-CFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQ 203 (554)
Q Consensus 147 ~~~~lV~Fya~w-C~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------~~~l~~~~~v~~~ 203 (554)
+++++|.||+.| |+.|....|.+.++.++ . ++.+..|+.+. +..+++.|++..
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~- 119 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTI- 119 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBB-
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcc-
Confidence 568999999999 99999999999999988 3 58888888762 356899999986
Q ss_pred C---------Ccceec-cCCeEEEEeC--C---cccHHHHHHHHHHhCC
Q psy16770 204 L---------PQIALL-TDGRTSFFKE--P---SFSVQKMVEFFRLKLP 237 (554)
Q Consensus 204 ~---------Pti~~~-~~g~~~~y~~--g---~~~~~~i~~fl~~~~~ 237 (554)
. |+.+++ ++|++..... + ....+++++.+.+-.+
T Consensus 120 ~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 120 ADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp CSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred cccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhcC
Confidence 7 776666 7898765542 2 2244556665554443
No 254
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.17 E-value=5.5e-06 Score=74.30 Aligned_cols=72 Identities=15% Similarity=0.257 Sum_probs=58.5
Q ss_pred CcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC---------------------cHHHHHHhCCcCCCC
Q psy16770 148 TPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------EQGLARRLGVGSQLP 205 (554)
Q Consensus 148 ~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~---------------------~~~l~~~~~v~~~~P 205 (554)
++++|.|| +.||+.|....|.+.++.++++..+ .+..|.++. +..+++.||+.. .|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-~p 113 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKK-TP 113 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBS-SS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcc-cc
Confidence 36788887 9999999999999999999998767 777777643 446889999997 98
Q ss_pred -------cceeccCCeEEEEeCCc
Q psy16770 206 -------QIALLTDGRTSFFKEPS 222 (554)
Q Consensus 206 -------ti~~~~~g~~~~y~~g~ 222 (554)
++++ ++|++.....|.
T Consensus 114 ~~g~~~~~~li-~~G~i~~~~~g~ 136 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKFKRVKI 136 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEEEEESC
T ss_pred cCCccceEEEE-cCCEEEEEEccC
Confidence 6677 999987665443
No 255
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.17 E-value=4e-06 Score=75.40 Aligned_cols=88 Identities=17% Similarity=0.179 Sum_probs=67.1
Q ss_pred CCcEEEEEEc-ccccccccchHHHHHHHHHhCCCCEEEEEEEecC---------------------cHHHHHHhCCcCC-
Q psy16770 147 TTPHLILFYS-DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------EQGLARRLGVGSQ- 203 (554)
Q Consensus 147 ~~~~lV~Fya-~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~---------------------~~~l~~~~~v~~~- 203 (554)
+++++|.||+ .||++|....|.+.++.+++++.++.+..|.++. +..+++.||+. .
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-~~ 113 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVI-KE 113 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCE-EE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCc-cc
Confidence 4589999998 9999999999999999999986678888888863 33677788876 3
Q ss_pred -----------CCcceec-cCCeEEEEeCCc---ccHHHHHHHHHHh
Q psy16770 204 -----------LPQIALL-TDGRTSFFKEPS---FSVQKMVEFFRLK 235 (554)
Q Consensus 204 -----------~Pti~~~-~~g~~~~y~~g~---~~~~~i~~fl~~~ 235 (554)
.|+.+++ ++|++...+.+. ...+++.+.+++.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 7888888 788876544432 2346666666554
No 256
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.16 E-value=8.1e-06 Score=77.41 Aligned_cols=43 Identities=19% Similarity=0.282 Sum_probs=38.8
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH 189 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~ 189 (554)
.++++||.|||+||+.|+ ..|.++++.+++++.|+.+..|.|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 357999999999999998 8999999999998778999999875
No 257
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.11 E-value=4.3e-06 Score=77.63 Aligned_cols=42 Identities=17% Similarity=0.293 Sum_probs=36.0
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV 188 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~ 188 (554)
..++.+++|+++||++|+++.|.+.++.+.+.. ++.+..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 467899999999999999999999999998876 577775554
No 258
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.08 E-value=7.6e-06 Score=76.10 Aligned_cols=43 Identities=16% Similarity=0.308 Sum_probs=38.3
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH 189 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~ 189 (554)
..++++|.|+++||++|+++.|.++++.+.+.+ ++.+..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 467899999999999999999999999998876 5888888874
No 259
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.07 E-value=3e-06 Score=76.09 Aligned_cols=88 Identities=9% Similarity=0.238 Sum_probs=56.6
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC---------------------cHHHHHHhCCcC--
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------EQGLARRLGVGS-- 202 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~---------------------~~~l~~~~~v~~-- 202 (554)
+++++|.|| +.||+.|....|.+.++.++++..++.+..|+.+. +.+++++|||..
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~~ 109 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWEF 109 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEEC
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCcccc
Confidence 568899998 99999999999999999988887788888887764 235666777631
Q ss_pred --------CCCcceec-cCCeEEEEe-----CCcccHHHHHHHHHH
Q psy16770 203 --------QLPQIALL-TDGRTSFFK-----EPSFSVQKMVEFFRL 234 (554)
Q Consensus 203 --------~~Pti~~~-~~g~~~~y~-----~g~~~~~~i~~fl~~ 234 (554)
..|++.++ ++|++.... .+..+.++|.+.++.
T Consensus 110 ~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 110 PALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp TTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred ccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 13555555 678764322 233466778777654
No 260
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.06 E-value=1e-05 Score=76.32 Aligned_cols=43 Identities=14% Similarity=0.112 Sum_probs=38.2
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH 189 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~ 189 (554)
.++++||.|||+||+.| ...|.++++.+++++.|+.+..|.|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 35699999999999999 68899999999998778999999875
No 261
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.02 E-value=8.6e-06 Score=78.71 Aligned_cols=87 Identities=17% Similarity=0.181 Sum_probs=63.2
Q ss_pred CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe------------------------------------
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV------------------------------------ 188 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~------------------------------------ 188 (554)
...++.++.|+.+||++|+++.|.++++.+. + ++.+..++.
T Consensus 95 ~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l 171 (241)
T 1v58_A 95 KDAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKL 171 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCC
T ss_pred CCCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCC
Confidence 3456789999999999999999998887664 3 466654433
Q ss_pred --------------cCcHHHHHHhCCcCCCCcceecc-CCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 189 --------------HNEQGLARRLGVGSQLPQIALLT-DGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 189 --------------~~~~~l~~~~~v~~~~Pti~~~~-~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+.+..+++++||++ +||+++.. +|+..... |..+.+.|.+++.+..
T Consensus 172 ~~~~~~~~~~~~~v~~~~~l~~~~gv~g-tPt~vi~~~~G~~~~~~-G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 172 NVPANVSTEQMKVLSDNEKLMDDLGANV-TPAIYYMSKENTLQQAV-GLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHTCCS-SCEEEEEETTTEEEEEE-SSCCHHHHHHHTTC--
T ss_pred CccccCCHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCCEEEec-CCCCHHHHHHHHHHHH
Confidence 12356788999998 99999985 57643334 5568888888876554
No 262
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.00 E-value=2.5e-06 Score=70.91 Aligned_cols=59 Identities=14% Similarity=0.254 Sum_probs=44.2
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc-------HHHHHHhCCcCCCCcceeccCCeEE
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-------QGLARRLGVGSQLPQIALLTDGRTS 216 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~-------~~l~~~~~v~~~~Pti~~~~~g~~~ 216 (554)
++.|+++||++|+++.+.+++...... + +..+|++.+ ..+++.+|+.+ +|++ |.+|+.+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~--~--~~~vdi~~~~~~~~~~~~l~~~~g~~~-vP~i--~~~g~~i 79 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG--L--LEFVDITATSDTNEIQDYLQQLTGART-VPRV--FIGKECI 79 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT--S--EEEEEGGGSTTHHHHHHHHHHHHSCCC-SCEE--EETTEEE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC--c--cEEEEccCCCCHHHHHHHHHHHhCCCC-cCeE--EECCEEE
Confidence 677999999999999998886543321 1 666777765 35888999997 9997 4477643
No 263
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.99 E-value=8.7e-06 Score=77.56 Aligned_cols=89 Identities=16% Similarity=0.269 Sum_probs=67.9
Q ss_pred CCCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHH
Q psy16770 146 YTTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLAR 196 (554)
Q Consensus 146 ~~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~ 196 (554)
.++++||.|| +.||+.|....|.+.++.++++..++.+..|.++. +..+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 3568999999 99999999999999999998875578888887654 125677
Q ss_pred HhCC-----cCCCCcceec-cCCeEEEEeCC----cccHHHHHHHHHHh
Q psy16770 197 RLGV-----GSQLPQIALL-TDGRTSFFKEP----SFSVQKMVEFFRLK 235 (554)
Q Consensus 197 ~~~v-----~~~~Pti~~~-~~g~~~~y~~g----~~~~~~i~~fl~~~ 235 (554)
.||+ .. .|+.+++ ++|+++....+ ..+.+++.+.++..
T Consensus 135 ~ygv~~~~g~~-~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFA-LRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEE-CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCc-cceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7888 35 7988888 68887655322 24678888887765
No 264
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.96 E-value=1.9e-05 Score=67.97 Aligned_cols=94 Identities=16% Similarity=0.209 Sum_probs=74.8
Q ss_pred cccc-ccccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcc
Q psy16770 129 KLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207 (554)
Q Consensus 129 ~~~L-t~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti 207 (554)
+..| |.+++++.+ +.+.+++|-|+++||+.| .+.|.++|+.+ + .+.|+.++ ++++++++++. .|++
T Consensus 23 ~~~i~s~~e~e~fi---~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~---~~~v~~~~~v~--~~~v 89 (124)
T 2l4c_A 23 PTWLTDVPAAMEFI---AATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIST---DSEVLTHYNIT--GNTI 89 (124)
T ss_dssp CEECCSHHHHHHHH---HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEEC---CHHHHHHTTCC--SSCE
T ss_pred ceEcCCHHHHHHHH---hcCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEC---hHHHHHHcCCC--CCeE
Confidence 3334 457788877 457789999999999998 78999999999 4 48998775 47899999997 5999
Q ss_pred eeccCC--eEEEEeC---CcccHHHHHHHHHHh
Q psy16770 208 ALLTDG--RTSFFKE---PSFSVQKMVEFFRLK 235 (554)
Q Consensus 208 ~~~~~g--~~~~y~~---g~~~~~~i~~fl~~~ 235 (554)
++|+++ ....|.| |..+.++|.+||...
T Consensus 90 vlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 90 CLFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EEEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 999875 3566665 356889999999864
No 265
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.93 E-value=2.2e-05 Score=72.02 Aligned_cols=88 Identities=11% Similarity=0.076 Sum_probs=64.9
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC---------------------cHHHHHHhCCcC--
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------EQGLARRLGVGS-- 202 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~---------------------~~~l~~~~~v~~-- 202 (554)
+++++|.|| +.||+.|....|.++++.++++..++.+..|.++. +..+++.||+..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 457888888 99999999999999999999987789999888764 336777788753
Q ss_pred ---------CCCcceec-cCCeEEEEeCCc---ccHHHHHHHHHH
Q psy16770 203 ---------QLPQIALL-TDGRTSFFKEPS---FSVQKMVEFFRL 234 (554)
Q Consensus 203 ---------~~Pti~~~-~~g~~~~y~~g~---~~~~~i~~fl~~ 234 (554)
..|+.+++ ++|++.....+. ...+++++.+++
T Consensus 131 ~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp CCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHH
T ss_pred cccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 04767777 788876544332 344666666654
No 266
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.91 E-value=0.00062 Score=65.42 Aligned_cols=206 Identities=14% Similarity=0.092 Sum_probs=110.7
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-----HHhhccC---CceEEEEEEccCCCChhHHhHhCCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHR---TTIVFGVIVYDQEDSSSVFQRFKVPGD 312 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-----~~a~~~~---~~v~Fg~v~~~~~~~~~l~~k~~i~~~ 312 (554)
+..++.+++++.+.. .++++++.|...--++.+.. ..+..+. ..+.|+.++++...+.+++++|+|.+
T Consensus 14 v~~l~~~~f~~~i~~---~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~- 89 (244)
T 3q6o_A 14 LTLLQADTVRGAVLG---SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG- 89 (244)
T ss_dssp SEEECTTTHHHHHSS---CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS-
T ss_pred ceeCChhhHHHHHhh---CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc-
Confidence 667788899887753 45777777754433322221 1122333 37999999996557899999999997
Q ss_pred CceEEEEeCCCCCC-CceeecCCCChhHHHhHHhc----CC---Cc---ccccccchhhhhhcC-CCCceEEEEEcCCCC
Q psy16770 313 KDSLLIFKEDKDRP-SASITMNSIPVPTLQDITDN----NP---YL---TLPRISSQSMLDAVC-PVKKLCVVLFSEDSP 380 (554)
Q Consensus 313 ~Ptlvvfk~~~~~~-~~~i~~~~~~~~~l~~fi~~----~~---~~---~v~~lt~~~~~~~~c-~~~~lcvvl~~~~~~ 380 (554)
.||+++|+++.... ...+..+..+...|.++|.. +. .+ .+...+..++.+..- ......+++|....
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~- 168 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGG- 168 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTTCCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTT-
T ss_pred cCEEEEEeCCCcCCCCeeEecCCCCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECC-
Confidence 99999998744321 11123333567666666543 32 11 222233333221110 12244445554432
Q ss_pred cchhHHHHHHHHHhhccCC-CCceEEEEEecccchHHHHhhCCCCCCccccceEEEEEEecCCCeeEEEecCCCCCcccc
Q psy16770 381 EHDASRHTLRRFAQESRFV-HNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKD 459 (554)
Q Consensus 381 ~~~~~~~~l~~~a~~~~~~-~~~v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ky~~~~~~~~~~~~~ 459 (554)
.. ..++++.. +. ...+.+..++.. ..++++.|-.. ..|.+++ + +..+ +...+...
T Consensus 169 -~~----~~~~~~~d--~~~~~~i~v~~~~~~-~~~l~~~f~v~-----~~Pslvl-~--~~~g-~~~~~~~~------- 224 (244)
T 3q6o_A 169 -SY----LAREVALD--LSQHKGVAVRRVLNT-EANVVRKFGVT-----DFPSCYL-L--FRNG-SVSRVPVL------- 224 (244)
T ss_dssp -CC----HHHHHHHH--TTTCTTEEEEEEETT-CHHHHHHHTCC-----CSSEEEE-E--ETTS-CEEECCCS-------
T ss_pred -cc----hHHHHHHH--hccCCceEEEEEeCc-hHHHHHHcCCC-----CCCeEEE-E--eCCC-CeEeeccc-------
Confidence 22 34444444 32 134777777653 57888888111 1234433 2 3233 22222321
Q ss_pred cchhhHHHHHHHHhhhc
Q psy16770 460 YNTTKDRLDAGLRSLVN 476 (554)
Q Consensus 460 ~~~t~e~l~~fl~~~~~ 476 (554)
..+++.+..+|+++.+
T Consensus 225 -~~~r~~~~~~l~~~~~ 240 (244)
T 3q6o_A 225 -MESRSFYTAYLQRLSG 240 (244)
T ss_dssp -SSSHHHHHHHHHTC--
T ss_pred -cccHHHHHHHHHhCCC
Confidence 3478889999988765
No 267
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.90 E-value=2.9e-06 Score=79.35 Aligned_cols=55 Identities=24% Similarity=0.433 Sum_probs=45.1
Q ss_pred ccccccccCCCCCCcEEEEEEcccccccccchHHH---HHHHHHhCCCCEEEEEEEecCc
Q psy16770 135 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNE 191 (554)
Q Consensus 135 ~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~~~~ 191 (554)
++|.....+. ..++++|+||+.||+||++++|.+ +++++.+.+ ++.|.+++++.+
T Consensus 102 ~~y~~l~~p~-~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~~~ 159 (197)
T 1un2_A 102 KQYTTLEKPV-AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVNFM 159 (197)
T ss_dssp TTEEECSSCC-TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECSSS
T ss_pred CCceEccCCC-CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccCcC
Confidence 4566544333 357999999999999999999999 999999876 599999999865
No 268
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.89 E-value=9.2e-06 Score=68.75 Aligned_cols=57 Identities=16% Similarity=0.276 Sum_probs=44.9
Q ss_pred EEEEEEcccccccccchHHHHHHHHHhCCCCEE---EEEEEecCcH-------HHHHHhCCcCCCCcceeccCCeEE
Q psy16770 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVG---FFTVHVHNEQ-------GLARRLGVGSQLPQIALLTDGRTS 216 (554)
Q Consensus 150 ~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~---~~~Vd~~~~~-------~l~~~~~v~~~~Pti~~~~~g~~~ 216 (554)
.++.|+++||++|+++.+.+++ .++. +..+|++.++ .+++++|+.+ +|++.+ +|+.+
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~-------~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~-vP~v~i--~g~~i 86 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNK-------FSFKRGAYEIVDIKEFKPENELRDYFEQITGGKT-VPRIFF--GKTSI 86 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTT-------SCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCS-SCEEEE--TTEEE
T ss_pred CEEEEEeCCChhHHHHHHHHHH-------cCCCcCceEEEEccCCCChHHHHHHHHHHhCCCC-cCEEEE--CCEEE
Confidence 4777999999999988877664 3455 8889988774 7899999997 998743 78653
No 269
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.89 E-value=1.9e-05 Score=74.58 Aligned_cols=88 Identities=16% Similarity=0.306 Sum_probs=67.4
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
+++++|.|| +.||++|....|.+.++.++++..++.+..|.++. +..+++.
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 468999999 99999999999999999999976678888887653 1256777
Q ss_pred hCCc------CCCCcceec-cCCeEEEEe-CC---cccHHHHHHHHHHh
Q psy16770 198 LGVG------SQLPQIALL-TDGRTSFFK-EP---SFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~------~~~Pti~~~-~~g~~~~y~-~g---~~~~~~i~~fl~~~ 235 (554)
||+. . .|+.+++ ++|++.... +. .++.+++++.++..
T Consensus 128 ygv~~~~~g~~-~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 128 YGVYLEDSGHT-LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp TTCEETTTTEE-CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cCCcccCCCcc-cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 8873 4 8888888 688876543 21 13667888877764
No 270
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.89 E-value=1e-05 Score=78.36 Aligned_cols=86 Identities=19% Similarity=0.296 Sum_probs=67.2
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC---------------------------cHHHHHHhCCc
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------------EQGLARRLGVG 201 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~---------------------------~~~l~~~~~v~ 201 (554)
.+|+.|+++||+.|....|.+.+++++++..++.+..|+++. +..+++.||+.
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~ 115 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCC
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCc
Confidence 456678999999999999999999999987689999998864 34688999997
Q ss_pred -------CCCCcceec-cCCeEEEEe-CC---cccHHHHHHHHHHh
Q psy16770 202 -------SQLPQIALL-TDGRTSFFK-EP---SFSVQKMVEFFRLK 235 (554)
Q Consensus 202 -------~~~Pti~~~-~~g~~~~y~-~g---~~~~~~i~~fl~~~ 235 (554)
. +|++.++ ++|++.... +. .++.++|...+...
T Consensus 116 ~~~~g~~~-~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 116 HAESATHT-VRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp CTTCSSSC-CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cccCCCcc-cceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 6 8988777 688875432 21 14678888877654
No 271
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.87 E-value=7.9e-06 Score=73.99 Aligned_cols=90 Identities=12% Similarity=0.228 Sum_probs=64.4
Q ss_pred CCCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC---------------------cHHHHHHhCCcC-
Q psy16770 146 YTTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------EQGLARRLGVGS- 202 (554)
Q Consensus 146 ~~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~---------------------~~~l~~~~~v~~- 202 (554)
.++++++.|| +.||++|....|.+.++.++++..++.+..|+.+. +.++++.|||.+
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~ 111 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYHE 111 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCccc
Confidence 3567888888 99999999999999999998887788888887764 335777777631
Q ss_pred --------CCCcceec-cCCeEEEEe-C----CcccHHHHHHHHHHh
Q psy16770 203 --------QLPQIALL-TDGRTSFFK-E----PSFSVQKMVEFFRLK 235 (554)
Q Consensus 203 --------~~Pti~~~-~~g~~~~y~-~----g~~~~~~i~~fl~~~ 235 (554)
..|+..++ ++|++.... + ++.+.+++++.+++.
T Consensus 112 ~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 112 DLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp EETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred ccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 15666666 678764322 1 334667777777654
No 272
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.87 E-value=7.2e-05 Score=64.09 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=72.5
Q ss_pred CccccCCcccHHHHHhhhhcCCceEEEEEecCCchh-------HHHHHHhh---ccCCceEEEEEEccCCCChhHHhHhC
Q psy16770 239 KLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR-------LRYLINAF---KHRTTIVFGVIVYDQEDSSSVFQRFK 308 (554)
Q Consensus 239 ~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~-------~~~~~~a~---~~~~~v~Fg~v~~~~~~~~~l~~k~~ 308 (554)
..+..++.+++++.+.. .++++++.|...--++ +...+... ...+.+.|+.++++ .+.+++++|+
T Consensus 15 ~~v~~l~~~~f~~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~ 89 (127)
T 3h79_A 15 SRVVELTDETFDSIVMD---PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE--KYPDVIERMR 89 (127)
T ss_dssp CCCEECCTTTHHHHHTC---TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT--TCHHHHHHTT
T ss_pred CceEECChhhHHHHHhC---CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc--ccHhHHHhcC
Confidence 33677899999998852 3667777775433222 22222221 23467999999998 6889999999
Q ss_pred CCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 309 VPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 309 i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
|.+ +||+++|+++... ....+.|..+.+.|.+||+.+
T Consensus 90 v~~-~Pt~~~~~~g~~~-~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSG-FPTMRYYTRIDKQ-EPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CCS-SSEEEEECSSCSS-SCEECCSCCCHHHHHHHHHHH
T ss_pred Ccc-CCEEEEEeCCCCC-CceEecCCccHHHHHHHHHhc
Confidence 997 9999999875442 124577888999999999764
No 273
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.86 E-value=2.2e-05 Score=72.55 Aligned_cols=90 Identities=14% Similarity=0.204 Sum_probs=65.4
Q ss_pred CCcEEEEEEc-ccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------------------------cHHHHHHhCC
Q psy16770 147 TTPHLILFYS-DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 200 (554)
Q Consensus 147 ~~~~lV~Fya-~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------------------------~~~l~~~~~v 200 (554)
+++++|.||+ .||+.|....|.+.++.++++..++.+..|.++. +..+++.||+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 4689999995 9999999999999999998876678888887653 1245666666
Q ss_pred c----C-CCCcceec-cCCeEEEEeCCc----ccHHHHHHHHHHhC
Q psy16770 201 G----S-QLPQIALL-TDGRTSFFKEPS----FSVQKMVEFFRLKL 236 (554)
Q Consensus 201 ~----~-~~Pti~~~-~~g~~~~y~~g~----~~~~~i~~fl~~~~ 236 (554)
. + ..|+.+++ ++|++.....+. ++.+++.+.++...
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 5 1 05888887 688876544221 25778888777553
No 274
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.86 E-value=7.4e-05 Score=62.13 Aligned_cols=96 Identities=13% Similarity=0.162 Sum_probs=65.3
Q ss_pred CCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEE
Q psy16770 244 LSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 319 (554)
Q Consensus 244 ~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvf 319 (554)
.+.+++++.+.. ..++++++.|...--++.+... ..+...+++.|+.++++ .+++++++|+|.+ .||+++|
T Consensus 6 ~~~~~f~~~l~~--~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d--~~~~l~~~~~V~~-~PT~~~~ 80 (105)
T 3zzx_A 6 KDQEDFTKQLNE--AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVD--ECEDIAQDNQIAC-MPTFLFM 80 (105)
T ss_dssp CSHHHHHHHHHH--TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETT--TCHHHHHHTTCCB-SSEEEEE
T ss_pred CCHHHHHHHHHh--cCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecc--cCHHHHHHcCCCe-ecEEEEE
Confidence 355788888865 2567888877544333322221 11233467899999987 7899999999997 9999999
Q ss_pred eCCCCCCCceeecCCCChhHHHhHHhcCC
Q psy16770 320 KEDKDRPSASITMNSIPVPTLQDITDNNP 348 (554)
Q Consensus 320 k~~~~~~~~~i~~~~~~~~~l~~fi~~~~ 348 (554)
+++.. .. ...| .+...|.+||+.|+
T Consensus 81 ~~G~~--v~-~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 81 KNGQK--LD-SLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp ETTEE--EE-EEES-CCHHHHHHHHHHHC
T ss_pred ECCEE--EE-EEeC-cCHHHHHHHHHhcC
Confidence 86432 12 2234 47788999998764
No 275
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.82 E-value=5.9e-05 Score=68.49 Aligned_cols=92 Identities=13% Similarity=0.111 Sum_probs=68.7
Q ss_pred CCcEEEEEEccccc-ccccchHHHHHHHHHhCC--CCEEEEEEEecC-------------------------------cH
Q psy16770 147 TTPHLILFYSDWCF-ACLQVEPIFKKLMDELSP--LGVGFFTVHVHN-------------------------------EQ 192 (554)
Q Consensus 147 ~~~~lV~Fya~wC~-~C~~l~p~~~~~a~~l~~--~~v~~~~Vd~~~-------------------------------~~ 192 (554)
+++++|.||+.||+ .|....|.++++.++++. .++.+..|.++. ..
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 56899999999997 599999999999999963 357887776641 12
Q ss_pred HHHHHhCC---------cCCCCcceec-cCCeEEE-EeCCcccHHHHHHHHHHhCCCC
Q psy16770 193 GLARRLGV---------GSQLPQIALL-TDGRTSF-FKEPSFSVQKMVEFFRLKLPYK 239 (554)
Q Consensus 193 ~l~~~~~v---------~~~~Pti~~~-~~g~~~~-y~~g~~~~~~i~~fl~~~~~~~ 239 (554)
.+++.||+ .. .|++.++ ++|++.. +.|...+.++|.+.+.+.....
T Consensus 108 ~~~~~~g~~~~~~~~~~~~-~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIH-PNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp HHHHHTTCCCEEETTEEEC-CCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred HHHHHCCeEEecCCCcccc-CceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhccc
Confidence 46666554 32 5666666 7898864 4665567899999999887654
No 276
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.79 E-value=8.7e-05 Score=67.78 Aligned_cols=112 Identities=10% Similarity=0.060 Sum_probs=73.7
Q ss_pred HHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecC-------CchhHHHH-----HHhhccC-----CceEEEE
Q psy16770 230 EFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRS-------LPVRLRYL-----INAFKHR-----TTIVFGV 292 (554)
Q Consensus 230 ~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~-------~~~~~~~~-----~~a~~~~-----~~v~Fg~ 292 (554)
+++....+.. +..+|++++++++.+ ..+.++++.|... --.+.+.+ ..|..+. +++.|+.
T Consensus 10 ~l~~l~~~~~-vi~lt~~nF~~~v~~--~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~k 86 (178)
T 3ga4_A 10 DILQLKDDTG-VITVTADNYPLLSRG--VPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFT 86 (178)
T ss_dssp HHHTTCCTTS-EEECCTTTHHHHTTC--CTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHhhccCC-CEECCHHHHHHHHcc--cCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEE
Confidence 3333334444 677899999998853 2456777777651 11222221 1222333 7899999
Q ss_pred EEccCCCChhHHhHhCCCCCCceEEEEeCCCCCC---------Cceee---cC-CCChhHHHhHHhcC
Q psy16770 293 IVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRP---------SASIT---MN-SIPVPTLQDITDNN 347 (554)
Q Consensus 293 v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~---------~~~i~---~~-~~~~~~l~~fi~~~ 347 (554)
+|++ .+++++++|+|.+ .|||++|+++.... ....+ .+ ..+.+.|.+||...
T Consensus 87 vD~d--~~~~la~~~~I~s-iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~ 151 (178)
T 3ga4_A 87 VDVN--EVPQLVKDLKLQN-VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKI 151 (178)
T ss_dssp EETT--TCHHHHHHTTCCS-SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHH
T ss_pred EECc--cCHHHHHHcCCCC-CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHh
Confidence 9988 7999999999997 99999999865332 11111 23 67788899999765
No 277
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.78 E-value=2.9e-05 Score=62.31 Aligned_cols=68 Identities=19% Similarity=0.346 Sum_probs=50.5
Q ss_pred EEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec--CcHHHHHHh-CCcCCCCcceeccCCeEEEEeCCcccHH
Q psy16770 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH--NEQGLARRL-GVGSQLPQIALLTDGRTSFFKEPSFSVQ 226 (554)
Q Consensus 150 ~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~--~~~~l~~~~-~v~~~~Pti~~~~~g~~~~y~~g~~~~~ 226 (554)
-++.|+++||++|+++.+.+++. ++.+..+|.+ ....+.+++ ++.+ +|++. .+|+. .+|. +
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv~~~~~~~l~~~~~~~~~-vP~l~--~~g~~---i~g~---~ 70 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK-------GVKYTDIDASTSLRQEMVQRANGRNT-FPQIF--IGDYH---VGGC---D 70 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH-------TCCEEEECSCHHHHHHHHHHHHSSCC-SCEEE--ETTEE---CCSH---H
T ss_pred eEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCHHHHHHHHHHhCCCCC-cCEEE--ECCEE---EeCh---H
Confidence 36779999999999998888763 3667788887 566788889 9997 99984 37753 3443 5
Q ss_pred HHHHHHH
Q psy16770 227 KMVEFFR 233 (554)
Q Consensus 227 ~i~~fl~ 233 (554)
+|.++.+
T Consensus 71 ~i~~~~~ 77 (89)
T 2klx_A 71 DLYALEN 77 (89)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5666554
No 278
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.76 E-value=4.8e-05 Score=73.35 Aligned_cols=88 Identities=16% Similarity=0.303 Sum_probs=68.0
Q ss_pred CCcEEEEEEc-ccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFYS-DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fya-~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
+++++|.||+ .||+.|....|.+.++++++++.++.+..|.++. +..+++.
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 156 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKD 156 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHH
Confidence 4689999999 9999999999999999999987789998888764 2357788
Q ss_pred hCCc------CCCCcceec-cCCeEEEEe-C---CcccHHHHHHHHHHh
Q psy16770 198 LGVG------SQLPQIALL-TDGRTSFFK-E---PSFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~------~~~Pti~~~-~~g~~~~y~-~---g~~~~~~i~~fl~~~ 235 (554)
||+. . +|+++++ ++|++.... + ..++.+++++.+...
T Consensus 157 ygv~~~~~g~~-~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 157 YGVYLEDQGHT-LRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp TTCEETTTTEE-CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCccccCCCc-cceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 8887 5 7988888 788875432 2 124567777777643
No 279
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.75 E-value=2.1e-05 Score=68.31 Aligned_cols=56 Identities=20% Similarity=0.424 Sum_probs=42.9
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc---H----HHHHHhCCcCCCCcceeccCCeEE
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE---Q----GLARRLGVGSQLPQIALLTDGRTS 216 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~---~----~l~~~~~v~~~~Pti~~~~~g~~~ 216 (554)
++.|+++||++|+++.+.+++. ++.+..+|++.+ + .+++.+|+.+ +|++. .+|+.+
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~~~~~~~~~~~l~~~~g~~~-vP~l~--i~G~~i 91 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALYKMTGERT-VPRIF--VNGTFI 91 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHH-------TCCCEEEETTTSTTHHHHHHHHHHHHSSCC-SSEEE--ETTEEE
T ss_pred EEEEEcCCChHHHHHHHHHHHc-------CCCcEEEECcCCcCcHHHHHHHHHHhCCCC-cCEEE--ECCEEE
Confidence 4449999999999999988864 245667777765 4 3888999997 99984 478654
No 280
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.73 E-value=8.3e-05 Score=66.82 Aligned_cols=85 Identities=12% Similarity=0.106 Sum_probs=59.2
Q ss_pred CCcEEEEEEc-ccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------------------cHHHHHHhCCc-
Q psy16770 147 TTPHLILFYS-DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARRLGVG- 201 (554)
Q Consensus 147 ~~~~lV~Fya-~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------------------~~~l~~~~~v~- 201 (554)
+++++|.||+ .||++|....|.++++.+++ .++.+..|+++. +..+++.||+.
T Consensus 42 gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 119 (163)
T 1psq_A 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLI 119 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBC
T ss_pred CCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCcc
Confidence 4689999995 99999999999999998888 368888887653 23456666665
Q ss_pred ---CCC--Ccceec-cCCeEEEEeCC-----cccHHHHHHHHHH
Q psy16770 202 ---SQL--PQIALL-TDGRTSFFKEP-----SFSVQKMVEFFRL 234 (554)
Q Consensus 202 ---~~~--Pti~~~-~~g~~~~y~~g-----~~~~~~i~~fl~~ 234 (554)
+ + |+..++ ++|++.....| ..+.+++++.+++
T Consensus 120 ~~~g-~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 120 NEWH-LLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp TTTC-SBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred ccCC-ceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 2 3 777777 67877554422 2234667666653
No 281
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.69 E-value=2.6e-05 Score=69.19 Aligned_cols=56 Identities=20% Similarity=0.424 Sum_probs=42.6
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc---H----HHHHHhCCcCCCCcceeccCCeEE
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE---Q----GLARRLGVGSQLPQIALLTDGRTS 216 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~---~----~l~~~~~v~~~~Pti~~~~~g~~~ 216 (554)
++.|+++||++|+++.+.+++. ++.+..+|++.+ + .+++++|+.+ +|++. .+|+.+
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~-------~i~~~~vdId~~~~~~~~~~~L~~~~g~~t-vP~if--i~G~~i 113 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALYKMTGERT-VPRIF--VNGTFI 113 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH-------TCCCEEEEGGGCTTHHHHHHHHHHHHSCCC-SCEEE--ETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCeEEEECccCcCCHHHHHHHHHHhCCCC-cCeEE--ECCEEE
Confidence 3449999999999999988865 245666777655 3 3888999997 99984 478643
No 282
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.69 E-value=0.00014 Score=67.29 Aligned_cols=42 Identities=21% Similarity=0.441 Sum_probs=35.0
Q ss_pred CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEE
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH 187 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd 187 (554)
...++.+++|+.+||++|.++.|.+.++.+.+.. .+.+..+.
T Consensus 20 ~~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 61 (195)
T 2znm_A 20 QSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEH 61 (195)
T ss_dssp SSSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEE
T ss_pred CCCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEec
Confidence 3567889999999999999999999999988865 46666554
No 283
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.67 E-value=4.1e-05 Score=61.70 Aligned_cols=69 Identities=17% Similarity=0.315 Sum_probs=51.4
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec-----Cc----HHHHHHhCCcCCCCcceeccCCeEEEEeCC
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----NE----QGLARRLGVGSQLPQIALLTDGRTSFFKEP 221 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~-----~~----~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g 221 (554)
++.|+++||++|+++.+.+++. ++.+-.+|.+ .. .++.+.+++.+ +|++.+ +|+. .+|
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~-------gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~-vP~l~~--~g~~---i~G 80 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE-------GVDFEVIWIDKLEGEERKKVIEKVHSISGSYS-VPVVVK--GDKH---VLG 80 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH-------TCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSC-SCEEEE--TTEE---EES
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCCcEEEEeeeCCccchHHHHHHHHHhcCCCC-cCEEEE--CCEE---EeC
Confidence 5669999999999988877764 3445556666 33 66778899997 999887 6753 356
Q ss_pred cccHHHHHHHHH
Q psy16770 222 SFSVQKMVEFFR 233 (554)
Q Consensus 222 ~~~~~~i~~fl~ 233 (554)
. +.+.|.+++.
T Consensus 81 ~-~~~~l~~~l~ 91 (92)
T 3ic4_A 81 Y-NEEKLKELIR 91 (92)
T ss_dssp C-CHHHHHHHHH
T ss_pred C-CHHHHHHHhc
Confidence 5 7788888874
No 284
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.67 E-value=7.5e-05 Score=72.59 Aligned_cols=88 Identities=16% Similarity=0.302 Sum_probs=66.3
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
+++++|.|| +.||+.|....|.+.+++++++..++.+..|.++. +..+++.
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ 170 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 170 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHHH
Confidence 468889998 99999999999999999999987789998888764 2357788
Q ss_pred hCCc------CCCCcceec-cCCeEEEEe-C---CcccHHHHHHHHHHh
Q psy16770 198 LGVG------SQLPQIALL-TDGRTSFFK-E---PSFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~------~~~Pti~~~-~~g~~~~y~-~---g~~~~~~i~~fl~~~ 235 (554)
||+. . +|+++++ ++|++.... + ..++.++++..+...
T Consensus 171 ygv~~~~~g~~-~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 171 YGVYLEDSGHT-LRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HTCEETTTTEE-CEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred cCCccccCCCc-cceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 8875 3 6887777 678764432 1 124567777776543
No 285
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.67 E-value=3.7e-05 Score=69.20 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=36.6
Q ss_pred CCcEEEEEE-cccccccc-cchHHHHHHHHHhCCCCEE-EEEEEecC
Q psy16770 147 TTPHLILFY-SDWCFACL-QVEPIFKKLMDELSPLGVG-FFTVHVHN 190 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~-~l~p~~~~~a~~l~~~~v~-~~~Vd~~~ 190 (554)
+++++|.|| +.||+.|. ...|.+.++.++++..|+. +..|..+.
T Consensus 35 gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~ 81 (162)
T 1tp9_A 35 GKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVND 81 (162)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 568899999 89999999 8999999999988755677 77776543
No 286
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.66 E-value=4.7e-05 Score=62.68 Aligned_cols=72 Identities=18% Similarity=0.337 Sum_probs=51.5
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHh-----CCcCCCCcceeccCCeEEEEeC
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRL-----GVGSQLPQIALLTDGRTSFFKE 220 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~-----~v~~~~Pti~~~~~g~~~~y~~ 220 (554)
+...-++.|+++||++|+++.+.+++. ++.+..+|.+.++.+.+.+ |..+ +|++ |.+|+. .|
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~~~~~~~l~~~~~g~~~-vP~i--fi~g~~---ig 79 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCIDGDNEAREAMAARANGKRS-LPQI--FIDDQH---IG 79 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECTTCHHHHHHHHHHTTTCCC-SCEE--EETTEE---EE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcCCCHHHHHHHHHHhCCCCC-CCEE--EECCEE---Ee
Confidence 344456779999999999999888754 4678889998887665544 8886 9987 457753 35
Q ss_pred CcccHHHHHHHHH
Q psy16770 221 PSFSVQKMVEFFR 233 (554)
Q Consensus 221 g~~~~~~i~~fl~ 233 (554)
|. ++|..+..
T Consensus 80 G~---d~l~~~~~ 89 (99)
T 3qmx_A 80 GC---DDIYALDG 89 (99)
T ss_dssp SH---HHHHHHHH
T ss_pred Ch---HHHHHHHH
Confidence 54 55655543
No 287
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.65 E-value=5e-05 Score=59.54 Aligned_cols=68 Identities=16% Similarity=0.336 Sum_probs=49.5
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcH----HHHHHhCCcCCCCcceeccCCeEEEEeCCcccHH
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ----GLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQ 226 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~----~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~ 226 (554)
++.|+++||++|+++.+.+++. ++.+..+|.+.++ .+.+.+++.+ +|++. .+|+.+ +|. +
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~~~~~~~~~~~~~~~~~-vP~l~--~~g~~i---~g~---~ 66 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPIDGNAAKREEMIKRSGRTT-VPQIF--IDAQHI---GGY---D 66 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECTTCSHHHHHHHHHHSSCC-SCEEE--ETTEEE---ESH---H
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECCCCHHHHHHHHHHhCCCC-cCEEE--ECCEEE---eCH---H
Confidence 5679999999999998887753 4667778887653 3567889997 99984 477643 342 6
Q ss_pred HHHHHHHH
Q psy16770 227 KMVEFFRL 234 (554)
Q Consensus 227 ~i~~fl~~ 234 (554)
+|.+++++
T Consensus 67 ~i~~~~~~ 74 (82)
T 1fov_A 67 DLYALDAR 74 (82)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHC
Confidence 67776653
No 288
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.64 E-value=4.4e-05 Score=69.24 Aligned_cols=44 Identities=9% Similarity=0.079 Sum_probs=36.9
Q ss_pred CCcEEEEEE-ccccccccc-chHHHHHHHHHhCCCCE-EEEEEEecC
Q psy16770 147 TTPHLILFY-SDWCFACLQ-VEPIFKKLMDELSPLGV-GFFTVHVHN 190 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~-l~p~~~~~a~~l~~~~v-~~~~Vd~~~ 190 (554)
+++++|.|| +.||+.|.. ..|.+.+++++++..|+ .+..|+.+.
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~ 77 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVND 77 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 457778776 999999999 99999999998876678 888887654
No 289
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.61 E-value=0.00017 Score=64.86 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=52.4
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------------------cHHHHHHhCCcC
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARRLGVGS 202 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------------------~~~l~~~~~v~~ 202 (554)
+++++|.|| +.||+.|....|.+.++.+++ .++.+..|+++. +..+++.||+..
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 120 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDI 120 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCcee
Confidence 468899998 899999999999999999888 367777776543 245677777742
Q ss_pred --------CCCcceec-cCCeEEEEe
Q psy16770 203 --------QLPQIALL-TDGRTSFFK 219 (554)
Q Consensus 203 --------~~Pti~~~-~~g~~~~y~ 219 (554)
..|+.+++ ++|++....
T Consensus 121 ~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 121 QTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred cccccCCccceeEEEEcCCCEEEEEE
Confidence 02777777 677765544
No 290
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.61 E-value=0.0002 Score=62.35 Aligned_cols=97 Identities=12% Similarity=0.135 Sum_probs=68.4
Q ss_pred ccCCcccHHHHHhhhhcCCceEEEEEecCCc--hhHH-----HHHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 242 VPLSATNVDAFLDNWREDNKVHALLFQRSLP--VRLR-----YLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 242 ~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~--~~~~-----~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
..+|+++|++++.+ ...++++.|....- .+.+ .-..+.++.++++|+.++.+ .+++++.+|+|.+ .|
T Consensus 18 ~~vt~~~F~~~v~~---~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvD--e~~~la~~ygV~s-iP 91 (137)
T 2qsi_A 18 TLVDEATVDDFIAH---SGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAE--AERGLMARFGVAV-CP 91 (137)
T ss_dssp EEECTTTHHHHHHT---SSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGG--GHHHHHHHHTCCS-SS
T ss_pred cccCHhHHHHHHhc---CCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECC--CCHHHHHHcCCcc-CC
Confidence 35688999998853 34477777754322 2222 11223366789999999987 7899999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
|+++||++..- ....|-.+...|.++|+.+
T Consensus 92 TlilFkdG~~v---~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 92 SLAVVQPERTL---GVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp EEEEEECCEEE---EEEESCCCHHHHHHHHHHH
T ss_pred EEEEEECCEEE---EEEeCCCCHHHHHHHHHHH
Confidence 99999985431 2345667888888888743
No 291
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.60 E-value=3.9e-05 Score=65.32 Aligned_cols=59 Identities=17% Similarity=0.372 Sum_probs=43.6
Q ss_pred EEEEEcccccccccc-hHHHHHHHHHhCCCCEEEEEEEecCcH-------HHHHHhCCcCCCCcceeccCCeEE
Q psy16770 151 LILFYSDWCFACLQV-EPIFKKLMDELSPLGVGFFTVHVHNEQ-------GLARRLGVGSQLPQIALLTDGRTS 216 (554)
Q Consensus 151 lV~Fya~wC~~C~~l-~p~~~~~a~~l~~~~v~~~~Vd~~~~~-------~l~~~~~v~~~~Pti~~~~~g~~~ 216 (554)
++.|+++||++|+++ .+.+++... ..+.+..+|.+.++ .+.+.+|+.+ +|++ |.+|+.+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~----~~i~~~~vdid~~~~~~~~~~~l~~~~g~~t-vP~v--fi~g~~i 93 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV----PRSKVLVLQLNDMKEGADIQAALYEINGQRT-VPNI--YINGKHI 93 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCS-SCEE--EETTEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC----CCCCeEEEECccCCChHHHHHHHHHHhCCCC-cCEE--EECCEEE
Confidence 566999999999987 666553220 12778888988764 5888999997 9986 5678653
No 292
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.60 E-value=8.6e-05 Score=67.25 Aligned_cols=52 Identities=15% Similarity=0.174 Sum_probs=40.5
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecCcH---HHHHHhCC
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ---GLARRLGV 200 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~---~l~~~~~v 200 (554)
+++++|.|| +.||+.|....|.+.++.+++ .++.+..|.++... ..++++++
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~~~~~~~ 102 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRFCESFNI 102 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHHHHHTTC
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHHHHHcCC
Confidence 568899998 899999999999999999888 36888888876532 23445544
No 293
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.60 E-value=0.00017 Score=65.50 Aligned_cols=43 Identities=19% Similarity=0.128 Sum_probs=34.3
Q ss_pred CCCCCcEEEEEEcccccccccchHHHHHHHHHh--CCCCEEEEEEE
Q psy16770 144 KSYTTPHLILFYSDWCFACLQVEPIFKKLMDEL--SPLGVGFFTVH 187 (554)
Q Consensus 144 ~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l--~~~~v~~~~Vd 187 (554)
....++.++.|+..||++|+++.|.+.++.+++ .+ ++.+...+
T Consensus 24 ~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~ 68 (175)
T 1z6m_A 24 ESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKL 68 (175)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred CCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEe
Confidence 334567899999999999999999999988887 54 47666554
No 294
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.56 E-value=0.00011 Score=64.22 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=68.0
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCC--c-----hhHHHHHHhhccCCc-eEEEEEEccCCCChhHHhHhCCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSL--P-----VRLRYLINAFKHRTT-IVFGVIVYDQEDSSSVFQRFKVPGD 312 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~--~-----~~~~~~~~a~~~~~~-v~Fg~v~~~~~~~~~l~~k~~i~~~ 312 (554)
...+|+++|++.+. .+.++++.|.... - -....-..+.++.++ ++|+.++.+ .+++++.+|+|.+
T Consensus 19 ~~~~t~~~F~~~v~----~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD--e~~~lA~~ygV~s- 91 (140)
T 2qgv_A 19 WTPVSESRLDDWLT----QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE--QSEAIGDRFGAFR- 91 (140)
T ss_dssp CEECCHHHHHHHHH----TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH--HHHHHHHHHTCCS-
T ss_pred CccCCHHHHHHHHh----CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC--CCHHHHHHcCCcc-
Confidence 45778999999884 3555666664321 1 112222234466778 999999988 6899999999997
Q ss_pred CceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 313 KDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 313 ~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
.||+++||++..- ....|-.+...|.+||+.+
T Consensus 92 IPTlilFk~G~~v---~~~~G~~~k~~l~~~i~~~ 123 (140)
T 2qgv_A 92 FPATLVFTGGNYR---GVLNGIHPWAELINLMRGL 123 (140)
T ss_dssp SSEEEEEETTEEE---EEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEEE---EEEecCCCHHHHHHHHHHH
Confidence 9999999985431 2345667878888888754
No 295
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.55 E-value=6.2e-05 Score=62.53 Aligned_cols=65 Identities=20% Similarity=0.283 Sum_probs=47.3
Q ss_pred EEEEEc-----ccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHH----HHHHhCCcCCCCcceeccCCeEEEEeCC
Q psy16770 151 LILFYS-----DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG----LARRLGVGSQLPQIALLTDGRTSFFKEP 221 (554)
Q Consensus 151 lV~Fya-----~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~----l~~~~~v~~~~Pti~~~~~g~~~~y~~g 221 (554)
++.|++ +||++|+++.+.+++. ++.+..+|.+.++. +.+.+|+.+ +|++ |.+|+. .||
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~~~~~~~~l~~~~g~~~-vP~v--~i~g~~---igg 85 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILEDEEVRQGLKAYSNWPT-YPQL--YVKGEL---VGG 85 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGGCHHHHHHHHHHHTCCS-SCEE--EETTEE---EEC
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCCCHHHHHHHHHHHCCCC-CCeE--EECCEE---EeC
Confidence 344777 9999999999888764 46788999988766 556689997 9997 457864 455
Q ss_pred cccHHHHHHH
Q psy16770 222 SFSVQKMVEF 231 (554)
Q Consensus 222 ~~~~~~i~~f 231 (554)
. +++..+
T Consensus 86 ~---d~~~~l 92 (105)
T 2yan_A 86 L---DIVKEL 92 (105)
T ss_dssp H---HHHHHH
T ss_pred h---HHHHHH
Confidence 4 445443
No 296
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.51 E-value=0.0046 Score=66.20 Aligned_cols=167 Identities=17% Similarity=0.191 Sum_probs=97.8
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCc-------hhHHHHHHhhc-cCCceEEEEEEccCCCChhHHhHhCCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLP-------VRLRYLINAFK-HRTTIVFGVIVYDQEDSSSVFQRFKVPGD 312 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~-------~~~~~~~~a~~-~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~ 312 (554)
+..++.+++++.+.. .++++++.|...-- +.+...+.... ....+.|+.++++...+.+++++|+|.+
T Consensus 14 V~~Lt~~~f~~~v~~---~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~- 89 (519)
T 3t58_A 14 LTLLDADSVRPTVLG---SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG- 89 (519)
T ss_dssp SEEECTTTHHHHHSS---CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS-
T ss_pred cEECChHHHHHHHHh---CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc-
Confidence 667788899887743 45777776744322 22333332221 1237999999997546889999999997
Q ss_pred CceEEEEeCCCCCC-CceeecCCCChhHHHhHHhc----CC------CcccccccchhhhhhcC-CCCceEEEEEcCCCC
Q psy16770 313 KDSLLIFKEDKDRP-SASITMNSIPVPTLQDITDN----NP------YLTLPRISSQSMLDAVC-PVKKLCVVLFSEDSP 380 (554)
Q Consensus 313 ~Ptlvvfk~~~~~~-~~~i~~~~~~~~~l~~fi~~----~~------~~~v~~lt~~~~~~~~c-~~~~lcvvl~~~~~~ 380 (554)
.||+++|+++.... ......+..+...|.++|.. +. .|.+..++.+++.+.+- ......+|+|.....
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s 169 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDS 169 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTC
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCch
Confidence 99999998643311 12345566777766666643 32 12233444444422221 123555666654431
Q ss_pred cchhHHHHHHHHHhhccCCC-CceEEEEEecccchHHHHhh
Q psy16770 381 EHDASRHTLRRFAQESRFVH-NNIAFMYVFIEKQPEFVNAL 420 (554)
Q Consensus 381 ~~~~~~~~l~~~a~~~~~~~-~~v~F~~vd~~~q~~~~~~~ 420 (554)
. ..++++.. +.. ..+.+..++.. ..++++.|
T Consensus 170 --~----~~~~~~ld--l~~~~~v~v~~v~~~-~~~l~~kf 201 (519)
T 3t58_A 170 --Y----LGREVTLD--LSQYHAVAVRRVLNT-ESDLVNKF 201 (519)
T ss_dssp --C----HHHHHHHH--TTTCTTEEEEEEETT-CHHHHHHH
T ss_pred --H----HHHHHHHH--hhccCCeeEEEecCc-hHHHHHHc
Confidence 1 34455544 432 34777777653 57888988
No 297
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.51 E-value=0.00026 Score=66.08 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=53.9
Q ss_pred CCCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------------------cHHHHHHhCCc
Q psy16770 146 YTTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARRLGVG 201 (554)
Q Consensus 146 ~~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------------------~~~l~~~~~v~ 201 (554)
.+++++|.|| +.||+.|....|.++++.+++ .++.+..|.++. +..+++.||+.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~ 154 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVA 154 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhCce
Confidence 3568899998 789999999999999999998 368888887654 23567777775
Q ss_pred -------C-CCCcceec-cCCeEEEE
Q psy16770 202 -------S-QLPQIALL-TDGRTSFF 218 (554)
Q Consensus 202 -------~-~~Pti~~~-~~g~~~~y 218 (554)
+ ..|+.+++ ++|++...
T Consensus 155 ~~~~~~~g~~~p~~~lID~~G~I~~~ 180 (200)
T 3zrd_A 155 ITEGPLAGLTARAVVVLDGQDNVIYS 180 (200)
T ss_dssp ECSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred eecccCCCccccEEEEECCCCeEEEE
Confidence 1 04888777 67877544
No 298
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.50 E-value=8.7e-05 Score=68.44 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=35.1
Q ss_pred cEEEEEEccccccccc-chHHHHHHHHHhCCCCEE-EEEEEecC
Q psy16770 149 PHLILFYSDWCFACLQ-VEPIFKKLMDELSPLGVG-FFTVHVHN 190 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~-l~p~~~~~a~~l~~~~v~-~~~Vd~~~ 190 (554)
++|+.|++.||+.|.. ..|.+.+++++++..|+. +..|+.+.
T Consensus 59 vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~ 102 (184)
T 3uma_A 59 VVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVND 102 (184)
T ss_dssp EEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSC
T ss_pred EEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 4555566999999999 699999999999877788 88888765
No 299
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.50 E-value=0.00017 Score=58.35 Aligned_cols=75 Identities=17% Similarity=0.375 Sum_probs=54.9
Q ss_pred EEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHh-----CCcCCCCcceeccCCeEEEEeCCccc
Q psy16770 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRL-----GVGSQLPQIALLTDGRTSFFKEPSFS 224 (554)
Q Consensus 150 ~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~-----~v~~~~Pti~~~~~g~~~~y~~g~~~ 224 (554)
-++.|..+||++|++....+++ .|+.+-.+|.+.+++..+.+ |.++ +|+|.+ .+|.... +. +
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~-------~gi~y~~idi~~d~~~~~~~~~~~~G~~t-VP~I~i-~Dg~~l~---~~-~ 71 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA-------NRIAYDEVDIEHNRAAAEFVGSVNGGNRT-VPTVKF-ADGSTLT---NP-S 71 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHHSSSSSC-SCEEEE-TTSCEEE---SC-C
T ss_pred cEEEEcCCCCHhHHHHHHHHHh-------cCCceEEEEcCCCHHHHHHHHHHcCCCCE-eCEEEE-eCCEEEe---CC-C
Confidence 3677999999999987766553 36888999999887665443 6776 998754 6776543 33 5
Q ss_pred HHHHHHHHHHhCC
Q psy16770 225 VQKMVEFFRLKLP 237 (554)
Q Consensus 225 ~~~i~~fl~~~~~ 237 (554)
.++|.+++.+..+
T Consensus 72 ~~el~~~L~el~g 84 (92)
T 2lqo_A 72 ADEVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 6889888887654
No 300
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.49 E-value=0.00016 Score=65.15 Aligned_cols=85 Identities=13% Similarity=0.044 Sum_probs=57.2
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecCc-----------------------HHHHHHhCCcC
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----------------------QGLARRLGVGS 202 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~-----------------------~~l~~~~~v~~ 202 (554)
+++++|.|| +.||++|....|.++++.++ + ++.+..|.++.. ..+++.||+..
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 122 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM 122 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEE
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCcc
Confidence 468888898 78999999999999998877 3 577777776542 24455555541
Q ss_pred -----CCCcceec-cCCeEEEE-eC----CcccHHHHHHHHHH
Q psy16770 203 -----QLPQIALL-TDGRTSFF-KE----PSFSVQKMVEFFRL 234 (554)
Q Consensus 203 -----~~Pti~~~-~~g~~~~y-~~----g~~~~~~i~~fl~~ 234 (554)
..|+.+++ ++|++... .+ +..+.+++.+.+++
T Consensus 123 ~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 123 EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp TTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred ccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 05877777 67877554 21 22345667666653
No 301
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.41 E-value=0.00017 Score=63.88 Aligned_cols=82 Identities=18% Similarity=0.358 Sum_probs=59.6
Q ss_pred CCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEE-------------------------------------
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH------------------------------------- 187 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd------------------------------------- 187 (554)
...+..++.|..++|++|+++.+.++++ . ++++...+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~ 85 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFP 85 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCC
Confidence 4567889999999999999999887653 2 23333221
Q ss_pred -----ec----CcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhCC
Q psy16770 188 -----VH----NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 188 -----~~----~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~~ 237 (554)
|. ++..+++++||+| +||+++ .+|+. .. |..+.+.|.+.|.+...
T Consensus 86 ~~~~~~~~~v~~~~~la~~~gI~g-tPt~vi-~nG~~--i~-G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 86 VGGSICDNPVAETTSLGEQFGFNG-TPTLVF-PNGRT--QS-GYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp TTCCCCSCSHHHHHHHHHHTTCCS-SCEEEC-TTSCE--EE-SCCCTTHHHHHHHHTSC
T ss_pred CccHHHHHHHHHHHHHHHHhCCCc-cCEEEE-ECCEE--ee-CCCCHHHHHHHHHHHHH
Confidence 11 2567899999998 999998 67874 33 44577999998887654
No 302
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.41 E-value=0.00011 Score=59.22 Aligned_cols=56 Identities=18% Similarity=0.423 Sum_probs=42.6
Q ss_pred EEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHH----HHHHhCCcCCCCcceeccCCeE
Q psy16770 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG----LARRLGVGSQLPQIALLTDGRT 215 (554)
Q Consensus 150 ~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~----l~~~~~v~~~~Pti~~~~~g~~ 215 (554)
-++.|+++||++|+++.+.+++. ++.+..+|.+.++. +.+.+++.+ +|++ +.+|+.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~l~~~~~~~~-vP~l--~~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-------GAEFNEIDASATPELRAEMQERSGRNT-FPQI--FIGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEESTTSHHHHHHHHHHHTSSC-CCEE--EETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCCCHHHHHHHHHHhCCCC-cCEE--EECCEE
Confidence 36779999999999988877752 46788889887654 455889997 9975 457753
No 303
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.39 E-value=0.0012 Score=54.38 Aligned_cols=97 Identities=13% Similarity=0.270 Sum_probs=68.7
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+.. .++++++.|....-+..+... .+..+.+.+.|+.++++ .+++++++|+|.+ .||
T Consensus 6 v~~l~~~~~~~~~~~---~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt 79 (111)
T 3gnj_A 6 LEKLDTNTFEQLIYD---EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVE--EEKTLFQRFSLKG-VPQ 79 (111)
T ss_dssp SEECCHHHHHHHHTT---SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TCHHHHHHTTCCS-SCE
T ss_pred ceecCHHHHHHHHHh---cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECC--cChhHHHhcCCCc-CCE
Confidence 566788999988843 457777777655444333222 12245567999999988 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+...|.+||+.
T Consensus 80 ~~~~~~g~~-~--~~~~g~~~~~~l~~~l~~ 107 (111)
T 3gnj_A 80 ILYFKDGEY-K--GKMAGDVEDDEVEQMIAD 107 (111)
T ss_dssp EEEEETTEE-E--EEEESSCCHHHHHHHHHH
T ss_pred EEEEECCEE-E--EEEeccCCHHHHHHHHHH
Confidence 999975432 1 245677788888888864
No 304
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.37 E-value=0.0011 Score=54.34 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=69.1
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..+|.+++++.+. .++++++.|....-+...... .+..+.+.+.|+.++++ .+.+++++|+|.+ .|+
T Consensus 6 v~~l~~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~-~Pt 78 (109)
T 3tco_A 6 TLVLTEENFDEVIR----NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVD--ENQKIADKYSVLN-IPT 78 (109)
T ss_dssp CEECCTTTHHHHHH----HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred EEEecHHHHHHHHh----cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccc--cCHHHHHhcCccc-CCE
Confidence 56778999998885 367777777655444332222 22255668999999987 7889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+.+.|.++|+.
T Consensus 79 ~~~~~~g~~-~--~~~~g~~~~~~l~~~l~~ 106 (109)
T 3tco_A 79 TLIFVNGQL-V--DSLVGAVDEDTLESTVNK 106 (109)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHHHH
T ss_pred EEEEcCCcE-E--EeeeccCCHHHHHHHHHH
Confidence 999965422 1 245677788888888864
No 305
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.36 E-value=0.00019 Score=57.06 Aligned_cols=75 Identities=12% Similarity=0.139 Sum_probs=51.1
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc----HHHHHHhCC-----cCCCCcceeccCCeEEEEe
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE----QGLARRLGV-----GSQLPQIALLTDGRTSFFK 219 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~----~~l~~~~~v-----~~~~Pti~~~~~g~~~~y~ 219 (554)
..++.|+++||++|+++.+.+++. +..+.+..||...+ .++.+.+|. .+ +|++.+ +|+.+
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~-----~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~-vP~i~i--~g~~i--- 72 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEEN-----NIAFDETIIDDYAQRSKFYDEMNQSGKVIFPIST-VPQIFI--DDEHI--- 72 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHT-----TCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCS-SCEEEE--TTEEE---
T ss_pred eEEEEEEcCCChhHHHHHHHHHHc-----CCCceEEEeecCCChhHHHHHHHHhCCCCCCCCc-cCEEEE--CCEEE---
Confidence 346779999999999988776642 22345555555544 457778888 86 999854 77643
Q ss_pred CCcccHHHHHHHHHHhCC
Q psy16770 220 EPSFSVQKMVEFFRLKLP 237 (554)
Q Consensus 220 ~g~~~~~~i~~fl~~~~~ 237 (554)
||. +++.+++.+.+.
T Consensus 73 ~g~---~~i~~~~~~~~~ 87 (89)
T 3msz_A 73 GGF---TELKANADKILN 87 (89)
T ss_dssp ESH---HHHHHTHHHHTT
T ss_pred eCh---HHHHHHHHHHhc
Confidence 453 777777776654
No 306
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.36 E-value=0.0013 Score=63.06 Aligned_cols=101 Identities=10% Similarity=0.208 Sum_probs=70.1
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEec--CCc---hhHHHHHHhhccCCceEEEEEEccC---CCChhHHhHhCCC--
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQR--SLP---VRLRYLINAFKHRTTIVFGVIVYDQ---EDSSSVFQRFKVP-- 310 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~--~~~---~~~~~~~~a~~~~~~v~Fg~v~~~~---~~~~~l~~k~~i~-- 310 (554)
+..+|++++++.+. .++++++.|.. .-- |.+..++..+.-.+.+.|+.++++. ..+.+++++|+|.
T Consensus 7 v~~Lt~~nF~~~i~----~~~~vlV~FyA~~pWCgl~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~ 82 (240)
T 2qc7_A 7 ALPLDTVTFYKVIP----KSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKE 82 (240)
T ss_dssp CEECCTTHHHHHGG----GCSEEEEEECCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGG
T ss_pred ceECCHHHHHHHHc----CCCCEEEEEeCCCCCCcchHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCC
Confidence 56788999999774 35666666654 221 2222222222223579999999542 2478999999999
Q ss_pred CCCceEEEEeCCC-CCCCceeecCCCChhHHHhHHhcCC
Q psy16770 311 GDKDSLLIFKEDK-DRPSASITMNSIPVPTLQDITDNNP 348 (554)
Q Consensus 311 ~~~Ptlvvfk~~~-~~~~~~i~~~~~~~~~l~~fi~~~~ 348 (554)
+ +||+++|+++. ..+ ..+.|..+...|.+||+.+.
T Consensus 83 ~-~PTl~~f~~G~~~~~--~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 83 S-YPVFYLFRDGDFENP--VPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp G-CSEEEEEETTCSSCC--EECCSCSCHHHHHHHHHHTT
T ss_pred C-CCEEEEEeCCCcCcc--eeecCCCCHHHHHHHHHHhc
Confidence 7 99999999865 333 35678889999999999874
No 307
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.34 E-value=0.0007 Score=65.32 Aligned_cols=100 Identities=12% Similarity=0.167 Sum_probs=68.6
Q ss_pred ccccCCcccHHHHHhhhhcCCceEEEEEe--cC-C--chhHHHHHHhhcc-CCceEEEEEEccC---CCChhHHhHhCCC
Q psy16770 240 LIVPLSATNVDAFLDNWREDNKVHALLFQ--RS-L--PVRLRYLINAFKH-RTTIVFGVIVYDQ---EDSSSVFQRFKVP 310 (554)
Q Consensus 240 ~v~~~t~~~~~~fl~~~~~~~~~~v~~f~--~~-~--~~~~~~~~~a~~~-~~~v~Fg~v~~~~---~~~~~l~~k~~i~ 310 (554)
.+..+|+++|++.+. .++++++.|. .. . .|.+..++..+.. .+.+.|+.++|+. ..+.+++++|+|.
T Consensus 17 ~v~~Lt~~nF~~vi~----~~~~vlV~Fy~~ApWCgl~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~ 92 (248)
T 2c0g_A 17 GCVDLDELSFEKTVE----RFPYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVD 92 (248)
T ss_dssp TCEECCTTTHHHHHT----TSSEEEEEEEESSCCSHHHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCC
T ss_pred CcEECCHHHHHHHHh----cCCCEEEEEECCCCCCccHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCC
Confidence 366789999999773 3556666554 22 1 2223333333322 5689999999983 1178999999999
Q ss_pred --CCCceEEEEeCCC-CCCCceee--cCCCChhHHHhHHhcC
Q psy16770 311 --GDKDSLLIFKEDK-DRPSASIT--MNSIPVPTLQDITDNN 347 (554)
Q Consensus 311 --~~~Ptlvvfk~~~-~~~~~~i~--~~~~~~~~l~~fi~~~ 347 (554)
+ +||+++|+ +. ..+ ..+ .+..+...|.+||+.+
T Consensus 93 ~~~-~PTl~~F~-G~~~~~--~~y~~~G~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 93 DKN-FPSIFLFK-GNADEY--VQLPSHVDVTLDNLKAFVSAN 130 (248)
T ss_dssp TTS-CCEEEEES-SSSSSE--EECCTTSCCCHHHHHHHHHHH
T ss_pred cCC-CCeEEEEe-CCcCcc--eeecccCCCCHHHHHHHHHHh
Confidence 7 99999998 54 223 335 6888999999999876
No 308
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.33 E-value=0.00081 Score=61.89 Aligned_cols=42 Identities=12% Similarity=0.182 Sum_probs=34.5
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV 188 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~ 188 (554)
..++.+++|+.+||++|..+.|.+.++.+.+.+ ++.+..+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 356789999999999999999999999988765 477765543
No 309
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.31 E-value=0.0014 Score=53.58 Aligned_cols=97 Identities=13% Similarity=0.219 Sum_probs=67.6
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+. .+++.++.|....-+...... .+..+.+++.|..++++ .+.+++++|++.+ .|+
T Consensus 3 v~~l~~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt 75 (109)
T 2yzu_A 3 PIEVTDQNFDETLG----QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVD--ENPKTAMRYRVMS-IPT 75 (109)
T ss_dssp CEECCTTTHHHHHH----HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred ceEccHhHHHHHhc----CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECC--CCHhHHHhCCCCc-CCE
Confidence 45678888887774 367777777655444322222 12245557999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+++|+++.. . ....|..+...|.+|++..
T Consensus 76 ~~~~~~g~~-~--~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 76 VILFKDGQP-V--EVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHHHTT
T ss_pred EEEEeCCcE-e--eeEeCCCCHHHHHHHHHHH
Confidence 999965322 1 2456777888899998854
No 310
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.30 E-value=0.0003 Score=61.86 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=58.3
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCC--c-----hhHHHHHHhhccCCceE--EEEEEccCCCChhHHhHhCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSL--P-----VRLRYLINAFKHRTTIV--FGVIVYDQEDSSSVFQRFKVPG 311 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~--~-----~~~~~~~~a~~~~~~v~--Fg~v~~~~~~~~~l~~k~~i~~ 311 (554)
+..++++++++++.. +..++++|.... - -...+...+.++ +++. |+.++++ .+.+++++|+|.+
T Consensus 19 ~~~l~~~~f~~~i~~----~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d--~~~~la~~~~V~~ 91 (142)
T 2es7_A 19 WQPVEASTVDDWIKR----VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLE--QSEAIGDRFNVRR 91 (142)
T ss_dssp CEECCCC------------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHH--HHHHHHHTTTCCS
T ss_pred CcccccccHHHHHHh----CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECC--CCHHHHHhcCCCc
Confidence 566788999998853 334555664211 0 111122223355 7788 9999887 6788999999997
Q ss_pred CCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcCCCccccccc
Q psy16770 312 DKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRIS 356 (554)
Q Consensus 312 ~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~~~~~v~~lt 356 (554)
.||+++|+++.. . ....|..+...|.+||+...-....+++
T Consensus 92 -iPT~~~fk~G~~-v--~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 92 -FPATLVFTDGKL-R--GALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp -SSEEEEESCC-------CEESCCCHHHHHHHHHHHHC-------
T ss_pred -CCeEEEEeCCEE-E--EEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 999999976433 2 2356777888899999865444444433
No 311
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.29 E-value=0.0018 Score=53.66 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=67.9
Q ss_pred CCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCC
Q psy16770 236 LPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVP 310 (554)
Q Consensus 236 ~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~ 310 (554)
++.. +..++.+++++.+. ..+++.++.|....-+...... .+..+.+++.|+.++++ .+.+++++|+|.
T Consensus 5 ~~~~-v~~l~~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~v~ 78 (115)
T 1thx_A 5 MSKG-VITITDAEFESEVL---KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEID--PNPTTVKKYKVE 78 (115)
T ss_dssp -CCS-EEECCGGGHHHHTT---TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEEST--TCHHHHHHTTCC
T ss_pred ccCc-eEEeeccchhhHhh---cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcC--CCHHHHHHcCCC
Confidence 3444 56678888887663 3567777777554433322222 12245567999999987 688999999999
Q ss_pred CCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 311 GDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 311 ~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
. .|++++|+++.. . ....|..+...|.+|++.
T Consensus 79 ~-~Pt~~~~~~G~~-~--~~~~g~~~~~~l~~~l~~ 110 (115)
T 1thx_A 79 G-VPALRLVKGEQI-L--DSTEGVISKDKLLSFLDT 110 (115)
T ss_dssp S-SSEEEEEETTEE-E--EEEESCCCHHHHHHHHHH
T ss_pred c-eeEEEEEcCCEE-E--EEecCCCCHHHHHHHHHH
Confidence 7 999999965322 1 234567778888888864
No 312
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.28 E-value=0.0016 Score=53.09 Aligned_cols=98 Identities=10% Similarity=0.143 Sum_probs=67.8
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+. ..++++++.|....-+....... +..+.+++.|+.++++ .+.+++++|+|.+ .|+
T Consensus 4 v~~l~~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt 77 (107)
T 2i4a_A 4 TLAVSDSSFDQDVL---KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNID--DNPETPNAYQVRS-IPT 77 (107)
T ss_dssp EEECCTTTHHHHTT---TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETT--TCCHHHHHTTCCS-SSE
T ss_pred eeecchhhhhHHHH---hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECC--CCHHHHHhcCCCc-cCE
Confidence 55678888876653 35677778776554443322221 1245568999999987 6788999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+++|+++.. . ....|..+.+.|.+||+.+
T Consensus 78 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 78 LMLVRDGKV-I--DKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHHHHT
T ss_pred EEEEeCCEE-E--EEecCCCCHHHHHHHHHhc
Confidence 999965322 1 2356777888899998754
No 313
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.28 E-value=0.00015 Score=60.98 Aligned_cols=56 Identities=27% Similarity=0.627 Sum_probs=41.0
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc----H----HHHHHhCCcCCCCcceeccCCeEE
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE----Q----GLARRLGVGSQLPQIALLTDGRTS 216 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~----~----~l~~~~~v~~~~Pti~~~~~g~~~ 216 (554)
++.|+++||++|+++.+.+++. ++.+..+|.+.. + .+.+..|+.+ +|++ |.+|+.+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~t-vP~i--fi~g~~i 84 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELDQLGPQGPQLQKVLERLTGQHT-VPNV--FVCGKHI 84 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCS-SCEE--EETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEeecCCCChHHHHHHHHHHhCCCC-cCEE--EECCEEE
Confidence 6669999999999998888753 456667777652 2 2556679997 9998 5578543
No 314
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.26 E-value=0.0027 Score=54.08 Aligned_cols=98 Identities=14% Similarity=0.173 Sum_probs=66.4
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCch----hHH-HHHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPV----RLR-YLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~----~~~-~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+.. .++++++.|....-+ ... ....+..+.+.+.|+.++++ .+.+++++|+|.. .||
T Consensus 19 v~~l~~~~f~~~~~~---~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~-~Pt 92 (130)
T 2dml_A 19 VIELTPSNFNREVIQ---SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNAD--KHQSLGGQYGVQG-FPT 92 (130)
T ss_dssp SEECCTTTHHHHTTT---CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETT--TCHHHHHHHTCCS-SSE
T ss_pred cEECCHHHHHHHHhc---CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCC--CCHHHHHHcCCCc-cCE
Confidence 556788888876542 466777766432211 111 11122245667999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.... ..+.+..+...|.+|+..
T Consensus 93 ~~~~~~~~~~~--~~~~G~~~~~~l~~~l~~ 121 (130)
T 2dml_A 93 IKIFGANKNKP--EDYQGGRTGEAIVDAALS 121 (130)
T ss_dssp EEEESSCTTSC--EECCSCCSHHHHHHHHHH
T ss_pred EEEEeCCCCeE--EEeecCCCHHHHHHHHHH
Confidence 99998765422 345677788888888764
No 315
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.26 E-value=0.00069 Score=61.64 Aligned_cols=40 Identities=30% Similarity=0.564 Sum_probs=32.7
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEE
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTV 186 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~V 186 (554)
..++.+|+|+.-.|+||++++|.+.++.+++.. ++.+..+
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 457899999999999999999999999888765 3555544
No 316
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.24 E-value=0.00056 Score=56.41 Aligned_cols=71 Identities=20% Similarity=0.245 Sum_probs=47.1
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc-----HHHH----HHhCCcCCCCcceeccCCeEEEEe
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----QGLA----RRLGVGSQLPQIALLTDGRTSFFK 219 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~-----~~l~----~~~~v~~~~Pti~~~~~g~~~~y~ 219 (554)
.-++.|+++||++|+++.+.+++. ++.+..+|.+.. .++. +..|+.+ +|++.+ .+|+ ..
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~-------~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~-vP~l~i-~~~~---~i 89 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDL-------GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVS-FPTTII-NDEK---AI 89 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHH-------TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCC-SCEEEE-TTTE---EE
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc-------CCCcEEEEeeccCcccHHHHHHHHHHhCCCCc-cCEEEE-CCCE---EE
Confidence 446779999999999999888764 345556666641 2232 3358887 999876 3334 34
Q ss_pred CCcccHHHHHHHH
Q psy16770 220 EPSFSVQKMVEFF 232 (554)
Q Consensus 220 ~g~~~~~~i~~fl 232 (554)
||. +.+.|.+++
T Consensus 90 gg~-~~~~l~~~L 101 (103)
T 3nzn_A 90 VGF-KEKEIRESL 101 (103)
T ss_dssp ESC-CHHHHHHHT
T ss_pred EcC-CHHHHHHHh
Confidence 564 667777654
No 317
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.24 E-value=0.0021 Score=52.86 Aligned_cols=96 Identities=15% Similarity=0.214 Sum_probs=67.6
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHh-----hccC---CceEEEEEEccCCCChhHHhHhCCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA-----FKHR---TTIVFGVIVYDQEDSSSVFQRFKVPGD 312 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a-----~~~~---~~v~Fg~v~~~~~~~~~l~~k~~i~~~ 312 (554)
+..+|++++++.+. +++.++.|....-+..+..... ..+. ..+.|+.++++ .+.+++++|+|.+
T Consensus 7 v~~l~~~~~~~~~~-----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~- 78 (111)
T 3uvt_A 7 VLALTENNFDDTIA-----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT--AERNICSKYSVRG- 78 (111)
T ss_dssp SEECCTTTHHHHHH-----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT--TCHHHHHHTTCCS-
T ss_pred ceEcChhhHHHHhc-----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc--ccHhHHHhcCCCc-
Confidence 56778999999884 5567777755444433322211 1222 47899999887 6889999999997
Q ss_pred CceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 313 KDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 313 ~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
.|++++|+++.. . ....|..+.+.|.+||+.+
T Consensus 79 ~Pt~~~~~~g~~-~--~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 79 YPTLLLFRGGKK-V--SEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp SSEEEEEETTEE-E--EEECSCCSHHHHHHHHHHH
T ss_pred ccEEEEEeCCcE-E--EeccCCcCHHHHHHHHHhc
Confidence 999999976432 1 3456778888999998753
No 318
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.23 E-value=0.002 Score=52.49 Aligned_cols=96 Identities=14% Similarity=0.174 Sum_probs=65.5
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++++++++.+. .+++.++.|....-+...... .+..+.+.+.|..++++ .+.+++++|+|.+ .|+
T Consensus 2 v~~l~~~~~~~~~~----~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~v~~-~Pt 74 (105)
T 1nsw_A 2 TMTLTDANFQQAIQ----GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVD--ENPETTSQFGIMS-IPT 74 (105)
T ss_dssp CEEECTTTHHHHHS----SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred ceeccHHhHHHHHh----CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECc--CCHHHHHHcCCcc-ccE
Confidence 44567788886663 467777777654444322222 12245567999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+.+.|.++++.
T Consensus 75 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~ 102 (105)
T 1nsw_A 75 LILFKGGRP-V--KQLIGYQPKEQLEAQLAD 102 (105)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHTTT
T ss_pred EEEEeCCeE-E--EEEecCCCHHHHHHHHHH
Confidence 999965322 1 235677777888888864
No 319
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.23 E-value=0.00088 Score=63.67 Aligned_cols=87 Identities=15% Similarity=0.152 Sum_probs=63.3
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC-------------------------------cHHHHHH
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------------EQGLARR 197 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-------------------------------~~~l~~~ 197 (554)
.+|+.|+++||+.|....|.+.+++++++..++.+..|.++. +..+++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 456667899999999999999999999987788888887654 2346777
Q ss_pred hCCcC-----------CCCcceec-cCCeEEEEe-CC---cccHHHHHHHHHHh
Q psy16770 198 LGVGS-----------QLPQIALL-TDGRTSFFK-EP---SFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~~-----------~~Pti~~~-~~g~~~~y~-~g---~~~~~~i~~fl~~~ 235 (554)
||+.. ..|++.++ ++|++.... +. .++.++|...+...
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 77731 15777777 678765443 21 24678888877654
No 320
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.23 E-value=0.002 Score=52.44 Aligned_cols=96 Identities=16% Similarity=0.214 Sum_probs=67.7
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++++++++.+ .+++.++.|....-+..+... .+..+.+.+.|+.++++ .+.+++++|++.+ .|+
T Consensus 5 v~~l~~~~~~~~~-----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt 76 (106)
T 3die_A 5 IVKVTDADFDSKV-----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVD--ENPSTAAKYEVMS-IPT 76 (106)
T ss_dssp CEECCTTTHHHHS-----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCS-BSE
T ss_pred eEECCHHHHHHHh-----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECC--cCHHHHHhCCCcc-cCE
Confidence 4567888898877 366777777554444332222 12255667999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+++|+++.. . ....|..+.+.|.++|+..
T Consensus 77 ~~~~~~G~~-~--~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 77 LIVFKDGQP-V--DKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHHHTT
T ss_pred EEEEeCCeE-E--EEEeCCCCHHHHHHHHHHh
Confidence 999975322 1 2456777888899988753
No 321
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.20 E-value=0.0017 Score=54.08 Aligned_cols=100 Identities=13% Similarity=0.161 Sum_probs=67.1
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCC-------chhHHHHHHhhc-cCCceEEEEEEccCCCChhHHhHhCCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSL-------PVRLRYLINAFK-HRTTIVFGVIVYDQEDSSSVFQRFKVPGD 312 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~-------~~~~~~~~~a~~-~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~ 312 (554)
+..++.+++++.+. .++++++.|.... .+.+........ ....+.|+.++++ .+.+++++|+|.+
T Consensus 9 v~~l~~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~- 81 (120)
T 1mek_A 9 VLVLRKSNFAEALA----AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDAT--EESDLAQQYGVRG- 81 (120)
T ss_dssp EEECCTTTHHHHHH----HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETT--TCCSSHHHHTCCS-
T ss_pred cEEechhhHHHHHc----cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCC--CCHHHHHHCCCCc-
Confidence 56678889988874 3667777664332 222222222221 1246889999887 5678999999997
Q ss_pred CceEEEEeCCCCCCCceeecCCCChhHHHhHHhcCC
Q psy16770 313 KDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNP 348 (554)
Q Consensus 313 ~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~~ 348 (554)
.|++++|+++.. .....+.|..+...|.+|++.+.
T Consensus 82 ~Pt~~~~~~g~~-~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 82 YPTIKFFRNGDT-ASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp SSEEEEEESSCS-SSCEECCCCSSHHHHHHHHHTTS
T ss_pred ccEEEEEeCCCc-CCcccccCccCHHHHHHHHHhcc
Confidence 999999976433 11134567788889999998764
No 322
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.19 E-value=0.0024 Score=55.94 Aligned_cols=96 Identities=14% Similarity=0.265 Sum_probs=68.3
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+ ..++++++.|....-+..+... .+..+.+++.|+.++++ .+.+++++|+|.+ .||
T Consensus 40 v~~l~~~~~~~~~----~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~-~Pt 112 (148)
T 3p2a_A 40 VINATAETLDKLL----QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTE--AEPALSTRFRIRS-IPT 112 (148)
T ss_dssp CEECCTTTHHHHT----TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred ceecCHHHHHHHH----hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECc--CCHHHHHHCCCCc-cCE
Confidence 5677888898887 3567777777554433322221 22255678999999987 7889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ..+.|..+.+.|.+||+.
T Consensus 113 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~ 140 (148)
T 3p2a_A 113 IMLYRNGKM-I--DMLNGAVPKAPFDNWLDE 140 (148)
T ss_dssp EEEEETTEE-E--EEESSCCCHHHHHHHHHH
T ss_pred EEEEECCeE-E--EEEeCCCCHHHHHHHHHH
Confidence 999975322 1 246777888889998874
No 323
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.19 E-value=0.0024 Score=52.28 Aligned_cols=97 Identities=13% Similarity=0.201 Sum_probs=66.6
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+. ..+++.++.|....-+..+... .+..+.+++.|+.++++ .+.+++++|++.+ .|+
T Consensus 4 v~~l~~~~f~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt 77 (108)
T 2trx_A 4 IIHLTDDSFDTDVL---KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID--QNPGTAPKYGIRG-IPT 77 (108)
T ss_dssp EEECCTTTHHHHTT---TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT--TCTTHHHHTTCCS-SSE
T ss_pred ceecchhhHHHHHH---hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECC--CCHHHHHHcCCcc-cCE
Confidence 45678888886653 3567777777654433322222 22245667999999987 6788999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+.+.|.+||+.
T Consensus 78 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~ 105 (108)
T 2trx_A 78 LLLFKNGEV-A--ATKVGALSKGQLKEFLDA 105 (108)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHHHH
T ss_pred EEEEeCCEE-E--EEEecCCCHHHHHHHHHH
Confidence 999965322 1 245677788888888864
No 324
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.19 E-value=0.0021 Score=51.93 Aligned_cols=94 Identities=18% Similarity=0.292 Sum_probs=64.6
Q ss_pred ccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 242 VPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 242 ~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
..++.+++++.+. .+++.++.|....-+....... +..+.+ +.|+.++++ .+.+++++|++.+ .|++
T Consensus 2 ~~l~~~~~~~~~~----~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~--~~~~~~~~~~v~~-~Pt~ 73 (104)
T 2e0q_A 2 IHLDSKNFDSFLA----SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSD--ENPDIAARYGVMS-LPTV 73 (104)
T ss_dssp EECCTTTHHHHHH----HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCCS-SCEE
T ss_pred eecCHHHHHHHHh----cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECC--CCHHHHHhCCccc-cCEE
Confidence 4567888988884 3667777776544443222221 123444 999999987 6889999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++|+++.. . ....|..+...|.+|++.
T Consensus 74 ~~~~~g~~-~--~~~~g~~~~~~l~~~l~~ 100 (104)
T 2e0q_A 74 IFFKDGEP-V--DEIIGAVPREEIEIRIKN 100 (104)
T ss_dssp EEEETTEE-E--EEEESCCCHHHHHHHHHH
T ss_pred EEEECCeE-h--hhccCCCCHHHHHHHHHH
Confidence 99965322 1 245677788888888864
No 325
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.18 E-value=0.0021 Score=54.03 Aligned_cols=98 Identities=11% Similarity=0.074 Sum_probs=67.2
Q ss_pred ccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 240 LIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 240 ~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
.+..++++++++.+.. .++++++.|....-+..+... .+..+.+.+.|..++++ .+.+++++|+|.+ .|
T Consensus 14 ~~~~~~~~~f~~~v~~---~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d--~~~~l~~~~~v~~-~P 87 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVVN---SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID--DHTDLAIEYEVSA-VP 87 (119)
T ss_dssp EEECCSHHHHHHHTTT---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETT--TTHHHHHHTTCCS-SS
T ss_pred EEEecChhhHHHHHHc---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCC--CCHHHHHHcCCCc-cc
Confidence 3667788888876643 466777777654444332222 12245567999999987 6788999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++++|+++.. . ....|..+...|.+||+.
T Consensus 88 t~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~ 116 (119)
T 1w4v_A 88 TVLAMKNGDV-V--DKFVGIKDEDQLEAFLKK 116 (119)
T ss_dssp EEEEEETTEE-E--EEEESCCCHHHHHHHHHH
T ss_pred EEEEEeCCcE-E--EEEcCCCCHHHHHHHHHH
Confidence 9999965322 1 235577788888888864
No 326
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.18 E-value=0.0024 Score=54.48 Aligned_cols=98 Identities=11% Similarity=0.112 Sum_probs=67.2
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-----HHhhccC----CceEEEEEEccCCCChhHHhHhCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHR----TTIVFGVIVYDQEDSSSVFQRFKVPG 311 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-----~~a~~~~----~~v~Fg~v~~~~~~~~~l~~k~~i~~ 311 (554)
+..++++++++.+.. .++++++.|....-+..+.. ..+..+. +.+.|+.++++ .+.+++++|+|..
T Consensus 9 v~~l~~~~~~~~~~~---~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~ 83 (133)
T 1x5d_A 9 VIELTDDSFDKNVLD---SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDAT--VNQVLASRYGIRG 83 (133)
T ss_dssp CEECCTTHHHHHTTT---SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETT--TCCHHHHHHTCCS
T ss_pred CEEcCHhhHHHHHhc---CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECC--CCHHHHHhCCCCe
Confidence 567788888887643 46777777754433322211 1111333 67999999987 6789999999997
Q ss_pred CCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 312 DKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 312 ~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
.|++++|+++. ....+.+..+...|.+|+...
T Consensus 84 -~Pt~~~~~~g~---~~~~~~G~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 84 -FPTIKIFQKGE---SPVDYDGGRTRSDIVSRALDL 115 (133)
T ss_dssp -SSEEEEEETTE---EEEEECSCCSHHHHHHHHHHH
T ss_pred -eCeEEEEeCCC---ceEEecCCCCHHHHHHHHHHH
Confidence 99999998733 123466777888888888653
No 327
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.16 E-value=0.00012 Score=66.51 Aligned_cols=57 Identities=14% Similarity=0.276 Sum_probs=45.1
Q ss_pred CcEEEEEEcccccccccc-hHHHHHHHHHhCCCCEE-EEEEEecC---cHHHHHHhCCc-CCCC
Q psy16770 148 TPHLILFYSDWCFACLQV-EPIFKKLMDELSPLGVG-FFTVHVHN---EQGLARRLGVG-SQLP 205 (554)
Q Consensus 148 ~~~lV~Fya~wC~~C~~l-~p~~~~~a~~l~~~~v~-~~~Vd~~~---~~~l~~~~~v~-~~~P 205 (554)
+++|+.|++.||+.|... .|.+.+++++++..|+. +..|+.+. ....++++++. . ||
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~-fp 107 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDA-IE 107 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTT-SE
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCc-eE
Confidence 477888999999999998 99999999998766788 88888765 34456677763 4 55
No 328
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.16 E-value=0.0018 Score=53.74 Aligned_cols=99 Identities=14% Similarity=0.075 Sum_probs=67.7
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchh----HHH-HHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR----LRY-LINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~----~~~-~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++++++++.+ .++++++.|....-+. ... ...+..+.+.+.|+.++++ .+.+++++|+|.+ .|+
T Consensus 3 v~~l~~~~~~~~~-----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt 74 (112)
T 2voc_A 3 IVKATDQSFSAET-----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVD--ENQETAGKYGVMS-IPT 74 (112)
T ss_dssp CEECCTTTHHHHH-----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETT--TCCSHHHHTTCCS-BSE
T ss_pred eEEecHHHHHHHh-----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECC--CCHHHHHHcCCCc-ccE
Confidence 3457888888877 2567777664432221 111 1122245568999999987 6788999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhcCCCc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYL 350 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~~~~ 350 (554)
+++|+++.. . ....|..+.+.|.+|++.+.-+
T Consensus 75 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 75 LLVLKDGEV-V--ETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHHHTTSCS
T ss_pred EEEEeCCEE-E--EEEeCCCCHHHHHHHHHHHHHh
Confidence 999965322 1 3456788889999999876443
No 329
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.15 E-value=0.0016 Score=60.94 Aligned_cols=106 Identities=16% Similarity=0.119 Sum_probs=72.1
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.++++..+. .++++++.|....-++..... .+..+.+.+.|+.++++ .+.+++++|+|.+ .||
T Consensus 99 v~~l~~~~f~~~~~----~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt 171 (210)
T 3apq_A 99 IITLERREFDAAVN----SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCG--DDRMLCRMKGVNS-YPS 171 (210)
T ss_dssp SEECCHHHHHHHHH----HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred eEEecHHHHHHHHc----cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECC--ccHHHHHHcCCCc-CCe
Confidence 55677888888773 356677766544333322221 22245667999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhcCCCccccccc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRIS 356 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~~~~~v~~lt 356 (554)
+++|+++.. . ....|..+...|.+||+...-+.+.+++
T Consensus 172 ~~~~~~G~~-~--~~~~G~~~~~~l~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 172 LFIFRSGMA-A--VKYNGDRSKESLVAFAMQHVRSTVTELS 209 (210)
T ss_dssp EEEECTTSC-C--EECCSCCCHHHHHHHHHHHHHCCSSCC-
T ss_pred EEEEECCCc-e--eEecCCCCHHHHHHHHHHhCcccceecC
Confidence 999965433 2 3466778888999999876444444443
No 330
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.12 E-value=0.0026 Score=51.65 Aligned_cols=97 Identities=12% Similarity=0.192 Sum_probs=65.7
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+.. .+++.++.|....-+....... +..+.+.+.|..++++ .+.+++++|++.+ .|+
T Consensus 2 v~~~~~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt 75 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLE---SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTD--EAPGIATQYNIRS-IPT 75 (105)
T ss_dssp CEECCTTTHHHHTTT---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred ceechhhhHHHHHhc---CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCc--chHHHHHhCCCCc-ccE
Confidence 345677888876643 4677777776554443322221 2245567999999887 6789999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+.+.+.++|+.
T Consensus 76 ~~~~~~g~~-~--~~~~G~~~~~~l~~~l~~ 103 (105)
T 1fb6_A 76 VLFFKNGER-K--ESIIGAVPKSTLTDSIEK 103 (105)
T ss_dssp EEEEETTEE-E--EEEEECCCHHHHHHHHHH
T ss_pred EEEEeCCeE-E--EEEecCCCHHHHHHHHHh
Confidence 999975322 1 234566777888888764
No 331
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.09 E-value=0.0026 Score=51.94 Aligned_cols=97 Identities=11% Similarity=0.133 Sum_probs=65.3
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++++++++.+.. .+++.++.|....-+...... .+..+.+.+.|..++++ .+.+++++|+|.+ .||
T Consensus 3 v~~l~~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt 76 (107)
T 1dby_A 3 AGAVNDDTFKNVVLE---SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTD--ESPNVASEYGIRS-IPT 76 (107)
T ss_dssp CEEECHHHHHHHTTT---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHHTCCS-SCE
T ss_pred cEeccHHHHHHHHhc---CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECC--CCHHHHHHCCCCc-CCE
Confidence 345677788776642 467777777654444322222 12245667999999887 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+.+.+.++|+.
T Consensus 77 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~ 104 (107)
T 1dby_A 77 IMVFKGGKK-C--ETIIGAVPKATIVQTVEK 104 (107)
T ss_dssp EEEESSSSE-E--EEEESCCCHHHHHHHHHH
T ss_pred EEEEeCCEE-E--EEEeCCCCHHHHHHHHHH
Confidence 999964322 1 245677777888888764
No 332
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.09 E-value=0.0028 Score=54.74 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=66.5
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCc-------hhHHHHHHhhcc-CCceEEEEEEccCCCChhHHhHhCCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLP-------VRLRYLINAFKH-RTTIVFGVIVYDQEDSSSVFQRFKVPGD 312 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~-------~~~~~~~~a~~~-~~~v~Fg~v~~~~~~~~~l~~k~~i~~~ 312 (554)
+..++.+++++.+. .++++++.|....- +.+......... ...+.|+.++++ .+.+++++|+|..
T Consensus 19 v~~l~~~~~~~~~~----~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~- 91 (140)
T 2dj1_A 19 VWVLNDGNFDNFVA----DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT--SASMLASKFDVSG- 91 (140)
T ss_dssp EEECCTTTHHHHHT----TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT--TCHHHHHHTTCCS-
T ss_pred CEEcChHhHHHHHh----cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc--ccHHHHHHCCCCc-
Confidence 55678889988874 46777777744322 223222222211 124899999887 6789999999997
Q ss_pred CceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 313 KDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 313 ~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
.|++++|+++. . ..+.+..+.+.|.+||+..
T Consensus 92 ~Pt~~~~~~G~--~--~~~~g~~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 92 YPTIKILKKGQ--A--VDYDGSRTQEEIVAKVREV 122 (140)
T ss_dssp SSEEEEEETTE--E--EECCSCCCHHHHHHHHHHH
T ss_pred cCeEEEEECCc--E--EEcCCCCCHHHHHHHHHHh
Confidence 99999997643 2 3456778888999999765
No 333
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.09 E-value=0.00067 Score=64.93 Aligned_cols=87 Identities=13% Similarity=0.165 Sum_probs=63.1
Q ss_pred CcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC-----------------------------cHHHHHH
Q psy16770 148 TPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------------EQGLARR 197 (554)
Q Consensus 148 ~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------------------------~~~l~~~ 197 (554)
+++++.|| ++||+.|....|.+.++.++++..++.+..|.++. +..+++.
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ 109 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVK 109 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHH
Confidence 37788888 99999999999999999998876678888887654 1246667
Q ss_pred hCCc------------CCCCcceec-cCCeEEEEe-CC---cccHHHHHHHHHHh
Q psy16770 198 LGVG------------SQLPQIALL-TDGRTSFFK-EP---SFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~------------~~~Pti~~~-~~g~~~~y~-~g---~~~~~~i~~fl~~~ 235 (554)
||+. . .|++.++ ++|++.... +. .++.++|+..+...
T Consensus 110 ygv~~~~~~~~~g~~~~-~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 110 LGMVDPDERTSTGMPLT-CRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp TTCEEEEEECTTCCEEE-CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCcCcccccCCCcccc-cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7764 3 6777777 678764332 11 24678888877654
No 334
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.08 E-value=0.0038 Score=52.24 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=65.4
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
....+.+++++.++.. .++++++.|....-++.+... .+..+.+ +.|..++++ .+.+++++|+|.+ .|+
T Consensus 14 ~~~~t~~~f~~~l~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d--~~~~l~~~~~v~~-~Pt 87 (116)
T 3qfa_C 14 KQIESKTAFQEALDAA--GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVD--DCQDVASECEVKS-MPT 87 (116)
T ss_dssp BCCCCHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETT--TTHHHHHHTTCCS-SSE
T ss_pred cCCCCHHHHHHHHHhc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHcCCcc-ccE
Confidence 4566788999988642 577777777554433332222 1223334 999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|. +...|.++|+.
T Consensus 88 ~~~~~~G~~-~--~~~~G~-~~~~l~~~l~~ 114 (116)
T 3qfa_C 88 FQFFKKGQK-V--GEFSGA-NKEKLEATINE 114 (116)
T ss_dssp EEEESSSSE-E--EEEESC-CHHHHHHHHHH
T ss_pred EEEEeCCeE-E--EEEcCC-CHHHHHHHHHH
Confidence 999965322 1 234455 78888888864
No 335
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.07 E-value=0.0043 Score=53.66 Aligned_cols=101 Identities=10% Similarity=0.143 Sum_probs=70.1
Q ss_pred cccCCcccHHHHHhhhhc--------CCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHh
Q psy16770 241 IVPLSATNVDAFLDNWRE--------DNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRF 307 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~--------~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~ 307 (554)
+..++.++++..+....+ .++++++.|....-+..+... .+..+.+.+.|..++++ .+.+++++|
T Consensus 24 v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~ 101 (141)
T 3hxs_A 24 TIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVD--KEPELARDF 101 (141)
T ss_dssp CEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHT
T ss_pred cccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECC--CCHHHHHHc
Confidence 566788888877753200 367778877554433322221 22255678999999987 688999999
Q ss_pred CCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 308 KVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 308 ~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+|.+ .|++++|.++.. . ....|..+...|.+||+..
T Consensus 102 ~v~~-~Pt~~~~~~~g~-~--~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 102 GIQS-IPTIWFVPMKGE-P--QVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp TCCS-SSEEEEECSSSC-C--EEEESCCCHHHHHHHHHHT
T ss_pred CCCC-cCEEEEEeCCCC-E--EEEeCCCCHHHHHHHHHHH
Confidence 9997 999999966444 2 2567888888999998754
No 336
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.06 E-value=0.0008 Score=63.76 Aligned_cols=87 Identities=9% Similarity=0.148 Sum_probs=63.0
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHHhCC
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARRLGV 200 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~~~v 200 (554)
.+|+.|+++||+.|....|.+.++.++++..++.+..|.++. +..+++.||+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 445556899999999999999999999987788988887753 2357778887
Q ss_pred c--------C---CCCcceec-cCCeEEEEe-C---CcccHHHHHHHHHHh
Q psy16770 201 G--------S---QLPQIALL-TDGRTSFFK-E---PSFSVQKMVEFFRLK 235 (554)
Q Consensus 201 ~--------~---~~Pti~~~-~~g~~~~y~-~---g~~~~~~i~~fl~~~ 235 (554)
. + ..|++.++ ++|++.... + ..++.++|...+...
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 3 1 15777777 678764433 1 124778888877654
No 337
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.04 E-value=0.0032 Score=52.93 Aligned_cols=99 Identities=9% Similarity=0.059 Sum_probs=64.8
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++.+.+. ..++++++.|....-+..+... .+..+.+.+.|+.++++ .+.+++++|+|.+ .||
T Consensus 5 v~~l~~~~f~~~~~---~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~-~Pt 78 (122)
T 3aps_A 5 SIDLTPQTFNEKVL---QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQ--AYPQTCQKAGIKA-YPS 78 (122)
T ss_dssp SEECCHHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred hhcCCHHHHHHHHh---cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCc--CCHHHHHHcCCCc-cce
Confidence 56678888855442 3467777777654433322221 12245568999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceee--cCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASIT--MNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~--~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. .....- .+..+.+.|.+|++.
T Consensus 79 ~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~ 110 (122)
T 3aps_A 79 VKLYQYERA-KKSIWEEQINSRDAKTIAALIYG 110 (122)
T ss_dssp EEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHH
T ss_pred EEEEeCCCc-cceeeccccCcCCHHHHHHHHHH
Confidence 999976544 211111 134678888888864
No 338
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.04 E-value=0.0019 Score=56.22 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=68.0
Q ss_pred ccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 240 LIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 240 ~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
.+..++++++.+.+. ..++++++.|....-+..+... .+..+.+.+.|+.++++ .+.+++++|+|.+ .|
T Consensus 7 ~v~~l~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~P 80 (140)
T 3hz4_A 7 SIIEFEDMTWSQQVE---DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIA--TNPWTAEKYGVQG-TP 80 (140)
T ss_dssp TEEEECHHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETT--TCHHHHHHHTCCE-ES
T ss_pred ceEEcchHhHHHHHH---hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECC--cCHhHHHHCCCCc-CC
Confidence 366778888874443 3477777777554433322221 22255667999999987 6889999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
|+++|+++.. . ..+.|..+...|.+||+..
T Consensus 81 t~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 81 TFKFFCHGRP-V--WEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp EEEEEETTEE-E--EEEESSCCHHHHHHHHHHH
T ss_pred EEEEEeCCcE-E--EEEcCCCCHHHHHHHHHHH
Confidence 9999976432 1 2456777888888888743
No 339
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.03 E-value=0.0035 Score=51.74 Aligned_cols=97 Identities=9% Similarity=0.087 Sum_probs=65.8
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++++++.+.+. ..++++++.|....-+..+... .+..+.+.+.|..++++ .+.+++++|+|.+ .||
T Consensus 7 v~~l~~~~~~~~~~---~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt 80 (112)
T 1t00_A 7 LKHVTDDSFEQDVL---KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNID--ENPGTAAKYGVMS-IPT 80 (112)
T ss_dssp CEEECTTTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred EEecchhhHHHHHh---hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcC--CCHHHHHhCCCCc-ccE
Confidence 45667888876553 2467777777654433322221 22245567999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+.+.|.++|+.
T Consensus 81 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~ 108 (112)
T 1t00_A 81 LNVYQGGEV-A--KTIVGAKPKAAIVRDLED 108 (112)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHTHH
T ss_pred EEEEeCCEE-E--EEEeCCCCHHHHHHHHHH
Confidence 999975422 1 235677777888888764
No 340
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.01 E-value=0.0033 Score=51.82 Aligned_cols=97 Identities=12% Similarity=0.116 Sum_probs=63.8
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEE
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 317 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlv 317 (554)
+.+.+++++.+......+++.++.|....-+...... .+..+.+.+.|..++++ .+.+++++|+|.+ .||++
T Consensus 7 i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~-~Pt~~ 83 (112)
T 1ep7_A 7 IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD--AVAAVAEAAGITA-MPTFH 83 (112)
T ss_dssp ECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TTHHHHHHHTCCB-SSEEE
T ss_pred ecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECC--chHHHHHHcCCCc-ccEEE
Confidence 3366888888864212267777777654433322221 12245558999999987 6889999999997 99999
Q ss_pred EEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 318 IFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 318 vfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+|+++.. . ....|. +...|.+||+.
T Consensus 84 ~~~~G~~--~-~~~~G~-~~~~l~~~l~~ 108 (112)
T 1ep7_A 84 VYKDGVK--A-DDLVGA-SQDKLKALVAK 108 (112)
T ss_dssp EEETTEE--E-EEEESC-CHHHHHHHHHH
T ss_pred EEECCeE--E-EEEcCC-CHHHHHHHHHH
Confidence 9975322 1 233455 77788888864
No 341
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.01 E-value=0.0041 Score=52.00 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=67.4
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++.+.+. ..++++++.|....-+...... .+..+.+.+.|+.++++ .+.+++++|+|.+ .|+
T Consensus 14 v~~l~~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~-~Pt 87 (121)
T 2i1u_A 14 TIKVTDASFATDVL---SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD--TNPETARNFQVVS-IPT 87 (121)
T ss_dssp SEECCTTTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred ceecCHHHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECC--CCHHHHHhcCCCc-CCE
Confidence 55678888876553 2467777777654443322222 12245567999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+++|+++.. .....|..+.+.|.+||+..
T Consensus 88 ~~~~~~g~~---~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 88 LILFKDGQP---VKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp EEEEETTEE---EEEEESCCCHHHHHHHTCSC
T ss_pred EEEEECCEE---EEEecCCCCHHHHHHHHHHH
Confidence 999975322 12456777888899988754
No 342
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.01 E-value=0.0038 Score=52.43 Aligned_cols=101 Identities=18% Similarity=0.146 Sum_probs=67.1
Q ss_pred CCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-----hhccCCceEEEEEEccCCCChhHHhHhCCCCC
Q psy16770 238 YKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGD 312 (554)
Q Consensus 238 ~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~ 312 (554)
...+..++.+++++.+......++++++.|....-+....... +..+.+ +.|..++++ .+.+++++|+|.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~--~~~~~~~~~~v~~- 87 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVD--ELKPIAEQFSVEA- 87 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCCS-
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECC--CCHHHHHHcCCCc-
Confidence 3446677888888888642235778888776554443322221 123444 999999987 6889999999997
Q ss_pred CceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 313 KDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 313 ~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
.||+++|+++.. . ....|.. .+.|.+||+.
T Consensus 88 ~Pt~~~~~~G~~-~--~~~~G~~-~~~l~~~l~~ 117 (122)
T 2vlu_A 88 MPTFLFMKEGDV-K--DRVVGAI-KEELTAKVGL 117 (122)
T ss_dssp SSEEEEEETTEE-E--EEEESSC-HHHHHHHHHH
T ss_pred ccEEEEEeCCEE-E--EEEeCcC-HHHHHHHHHH
Confidence 999999975432 1 2345555 7788888864
No 343
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.01 E-value=0.0049 Score=50.06 Aligned_cols=96 Identities=10% Similarity=0.156 Sum_probs=64.3
Q ss_pred ccCCc-ccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 242 VPLSA-TNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 242 ~~~t~-~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
..+++ +++++.+.. ..+++.++.|....-+...... .+..+.+.+.|..++++ .+.+++++|++.+ .|+
T Consensus 3 ~~l~~~~~~~~~l~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt 77 (106)
T 1xwb_A 3 YQVKDKADLDGQLTK--ASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD--ECEDIAMEYNISS-MPT 77 (106)
T ss_dssp EECCSHHHHHHHHHH--HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT--TCHHHHHHTTCCS-SSE
T ss_pred eecCCHHHHHHHHHh--cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEecc--chHHHHHHcCCCc-ccE
Confidence 34555 788888864 2577777777655444322221 12245578999999987 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....| .+.+.|.++|+.
T Consensus 78 ~~~~~~G~~--~-~~~~g-~~~~~l~~~i~~ 104 (106)
T 1xwb_A 78 FVFLKNGVK--V-EEFAG-ANAKRLEDVIKA 104 (106)
T ss_dssp EEEEETTEE--E-EEEES-CCHHHHHHHHHH
T ss_pred EEEEcCCcE--E-EEEcC-CCHHHHHHHHHH
Confidence 999975432 1 23345 567778888864
No 344
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.97 E-value=0.005 Score=52.09 Aligned_cols=100 Identities=8% Similarity=0.071 Sum_probs=67.0
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCC-ceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRT-TIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~-~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
+..++++++++.+. .+ +++.|....-+..+... .+..+.+ .+.|+.++++ .+.+++++|+|.. .|
T Consensus 9 v~~l~~~~f~~~~~-----~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~-~P 79 (126)
T 1x5e_A 9 VRVITDENWRELLE-----GD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT--EQPGLSGRFIINA-LP 79 (126)
T ss_dssp EEECCTTTHHHHTS-----SE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT--TCHHHHHHTTCCS-SS
T ss_pred cEEecHHHHHHHhC-----CC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc--CCHHHHHHcCCcc-cC
Confidence 56678899988763 22 45555433333222211 1113333 7999999987 6888999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhcCCCcccc
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLP 353 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~~~~~v~ 353 (554)
|+++|+++. . ..+.+..+.+.|.+||+......+.
T Consensus 80 t~~~~~~G~--~--~~~~G~~~~~~l~~~l~~~~~~~~~ 114 (126)
T 1x5e_A 80 TIYHCKDGE--F--RRYQGPRTKKDFINFISDKEWKSIE 114 (126)
T ss_dssp EEEEEETTE--E--EECCSCCCHHHHHHHHHTCGGGGSC
T ss_pred EEEEEeCCe--E--EEeecCCCHHHHHHHHHHHhhccCC
Confidence 999996543 2 3467778889999999877544443
No 345
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.95 E-value=0.00075 Score=56.31 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=46.0
Q ss_pred ccccccccCCCCCCcEEEEEEc-----ccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHH----HHHHhCCcCCCC
Q psy16770 135 WNFEKNYIPKSYTTPHLILFYS-----DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG----LARRLGVGSQLP 205 (554)
Q Consensus 135 ~~F~~~v~~~~~~~~~lV~Fya-----~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~----l~~~~~v~~~~P 205 (554)
+.+++.|. .+ . ++.|+. +||++|+++.+.+++. ++.+..+|.+.++. +.+..|..+ +|
T Consensus 6 ~~~~~~i~---~~-~-vvvy~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~~~~~~~~l~~~~g~~~-vP 72 (109)
T 1wik_A 6 SGLKVLTN---KA-S-VMLFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILEDEEVRQGLKTFSNWPT-YP 72 (109)
T ss_dssp CCHHHHHT---TS-S-EEEEESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESSSCHHHHHHHHHHHSCCS-SC
T ss_pred HHHHHHhc---cC-C-EEEEEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECCCCHHHHHHHHHHhCCCC-CC
Confidence 34555562 22 3 445777 9999999888777642 57889999998764 445668886 99
Q ss_pred cceeccCCeE
Q psy16770 206 QIALLTDGRT 215 (554)
Q Consensus 206 ti~~~~~g~~ 215 (554)
++ |.+|+.
T Consensus 73 ~i--fi~g~~ 80 (109)
T 1wik_A 73 QL--YVRGDL 80 (109)
T ss_dssp EE--ECSSSE
T ss_pred EE--EECCEE
Confidence 74 567864
No 346
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.94 E-value=0.0033 Score=55.82 Aligned_cols=96 Identities=11% Similarity=0.141 Sum_probs=66.0
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++++++++.+ ..++++++.|....-++.+... .+..+.+.+.|+.++++ .+.+++++|+|.+ .||
T Consensus 49 ~~~l~~~~f~~~~----~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~--~~~~l~~~~~i~~-~Pt 121 (155)
T 2ppt_A 49 VAGIDPAILARAE----RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQ--AHPAVAGRHRIQG-IPA 121 (155)
T ss_dssp EEECCHHHHHHHT----TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETT--TSTHHHHHTTCCS-SSE
T ss_pred CccCCHHHHHHHH----hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCC--ccHHHHHHcCCCc-CCE
Confidence 3456777777776 2466777777544433322221 22245667999999987 6789999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+...|.+||+.
T Consensus 122 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~ 149 (155)
T 2ppt_A 122 FILFHKGRE-L--ARAAGARPASELVGFVRG 149 (155)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHHHH
T ss_pred EEEEeCCeE-E--EEecCCCCHHHHHHHHHH
Confidence 999975322 1 235677788889999875
No 347
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.93 E-value=0.005 Score=53.06 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=67.7
Q ss_pred cccCCcccHHHHHhhhh--------cCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHh
Q psy16770 241 IVPLSATNVDAFLDNWR--------EDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRF 307 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~--------~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~ 307 (554)
+..++++++.+.+.... ..++++++.|....-+..+... .+..+.+.+.|+.++++ .+.+++++|
T Consensus 11 v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~--~~~~l~~~~ 88 (136)
T 2l5l_A 11 VIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTE--KEQELAGAF 88 (136)
T ss_dssp EEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHT
T ss_pred eEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCC--CCHHHHHHc
Confidence 45567777777664210 1356777777554433322221 12245667999999987 678999999
Q ss_pred CCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 308 KVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 308 ~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+|.+ .|++++|..+.. . ....+..+.+.|.+||+..
T Consensus 89 ~v~~-~Pt~~~~~~~G~-~--~~~~G~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 89 GIRS-IPSILFIPMEGK-P--EMAQGAMPKASFKKAIDEF 124 (136)
T ss_dssp TCCS-SCEEEEECSSSC-C--EEEESCCCHHHHHHHHHHH
T ss_pred CCCC-CCEEEEECCCCc-E--EEEeCCCCHHHHHHHHHHH
Confidence 9997 999999944333 2 2356788889999999765
No 348
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.91 E-value=0.0032 Score=57.39 Aligned_cols=90 Identities=8% Similarity=0.031 Sum_probs=65.2
Q ss_pred CCCCCcEEEEEEcccccccccchHH-H--HHHHHHhCCCCEEEEEEEecCcH---------------HHHHH---hCCcC
Q psy16770 144 KSYTTPHLILFYSDWCFACLQVEPI-F--KKLMDELSPLGVGFFTVHVHNEQ---------------GLARR---LGVGS 202 (554)
Q Consensus 144 ~~~~~~~lV~Fya~wC~~C~~l~p~-~--~~~a~~l~~~~v~~~~Vd~~~~~---------------~l~~~---~~v~~ 202 (554)
+...++.+|.+++|||..|..+... | +++.+-++. ++.+...|.+... .++.. +++.+
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~ 130 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQ 130 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTT
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCC
Confidence 3578899999999999999987632 1 234455544 4889999988765 34444 89997
Q ss_pred CCCcceecc-C---CeEEEEeCCcccHHHHHHHHHHh
Q psy16770 203 QLPQIALLT-D---GRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 203 ~~Pti~~~~-~---g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
||++.++. . ++.+....|..+++++++.+...
T Consensus 131 -~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 131 -FPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp -CSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred -CCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 99999982 2 24556666777889988877644
No 349
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.90 E-value=0.0023 Score=52.41 Aligned_cols=93 Identities=12% Similarity=0.153 Sum_probs=52.7
Q ss_pred CcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEe
Q psy16770 245 SATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFK 320 (554)
Q Consensus 245 t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk 320 (554)
|.+++++.+ ..++++++.|....-++.+... ..+...+++.|+.++++ .+.+++++|+|.+ .||+++|+
T Consensus 7 ~~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~-~Pt~~~~~ 79 (105)
T 4euy_A 7 TIEELATYI----EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQ--DMQEIAGRYAVFT-GPTVLLFY 79 (105)
T ss_dssp ---CCSSST----TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEEC--CC---------CC-CCEEEEEE
T ss_pred CHHHHHHHH----hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECC--CCHHHHHhcCCCC-CCEEEEEe
Confidence 456666666 2467777777554443332222 11222257999999987 6889999999997 99999998
Q ss_pred CCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 321 EDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 321 ~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
++.. . ....|..+...|.++|+..
T Consensus 80 ~G~~-~--~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NGKE-I--LRESRFISLENLERTIQLF 103 (105)
T ss_dssp TTEE-E--EEEESSCCHHHHHHHHHTT
T ss_pred CCeE-E--EEEeCCcCHHHHHHHHHHh
Confidence 5422 1 2346777888999988753
No 350
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.87 E-value=0.0034 Score=53.68 Aligned_cols=97 Identities=13% Similarity=0.195 Sum_probs=65.6
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-----HHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-----~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+. ..++++++.|....-+..+.. ..+..+.+++.|+.++++ .+.+++++|+|.. .||
T Consensus 24 v~~l~~~~f~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt 97 (128)
T 2o8v_B 24 IIHLTDDSFDTDVL---KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNID--QNPGTAPKYGIRG-IPT 97 (128)
T ss_dssp SEEECTTTHHHHTT---TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETT--TCCTTSGGGTCCS-SSE
T ss_pred cEecChhhHHHHHH---hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECC--CCHHHHHHcCCCc-cCE
Confidence 45567888886553 356777777755443322211 122245567999999987 6788999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|..+.+.|.+||+.
T Consensus 98 ~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~ 125 (128)
T 2o8v_B 98 LLLFKNGEV-A--ATKVGALSKGQLKEFLDA 125 (128)
T ss_dssp EEEEETTEE-E--EEEESCCCHHHHHHHHHH
T ss_pred EEEEeCCEE-E--EEEcCCCCHHHHHHHHHH
Confidence 999965322 1 235677788888888864
No 351
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.86 E-value=0.006 Score=49.47 Aligned_cols=94 Identities=16% Similarity=0.138 Sum_probs=63.6
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEE
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 317 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlv 317 (554)
+.+.+++++.++.. .+++.++.|....-+..+.... +..+ +.+.|..++++ .+.+++++|++.+ .|+++
T Consensus 5 i~~~~~~~~~l~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~-~~~~~~~vd~~--~~~~~~~~~~v~~-~Pt~~ 78 (105)
T 3m9j_A 5 IESKTAFQEALDAA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVD--DCQDVASESEVKS-MPTFQ 78 (105)
T ss_dssp CCSHHHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHS-TTSEEEEEETT--TCHHHHHHTTCCB-SSEEE
T ss_pred cCCHHHHHHHHHhc--CCCeEEEEEECCCChhhHHHHHHHHHHHHHc-cCeEEEEEEhh--hhHHHHHHcCCCc-CcEEE
Confidence 34667888888642 5777888776554443332222 1133 34999999987 6889999999997 99999
Q ss_pred EEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 318 IFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 318 vfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+|+++.. . ....|. +...|.++++.
T Consensus 79 ~~~~g~~-~--~~~~g~-~~~~l~~~l~~ 103 (105)
T 3m9j_A 79 FFKKGQK-V--GEFSGA-NKEKLEATINE 103 (105)
T ss_dssp EEETTEE-E--EEEESS-CHHHHHHHHHH
T ss_pred EEECCeE-E--EEEeCC-CHHHHHHHHHH
Confidence 9976432 1 234455 77888888864
No 352
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.86 E-value=0.0029 Score=53.72 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=62.4
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCch--------------h----HHHHH-HhhccCCceEEEEEEccCCCCh
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPV--------------R----LRYLI-NAFKHRTTIVFGVIVYDQEDSS 301 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~--------------~----~~~~~-~a~~~~~~v~Fg~v~~~~~~~~ 301 (554)
+..++++++++.+. ..++++++.|....-+ + ...+. .+..+.+++.|+.++++ .+.
T Consensus 5 v~~l~~~~f~~~~~---~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d--~~~ 79 (123)
T 1oaz_A 5 IIHLTDDSFDTDVL---KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNID--QNP 79 (123)
T ss_dssp CEECCSTTHHHHTT---SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETT--SCT
T ss_pred cEecChhhHHHHHH---hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECC--CCH
Confidence 45678888876543 3567777777443222 1 11111 12245567999999987 678
Q ss_pred hHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 302 SVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 302 ~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+++++|+|.+ .||+++|+++.. . ....|..+.+.|.+||+..
T Consensus 80 ~l~~~~~v~~-~Pt~~~~~~G~~-~--~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 80 GTAPKYGIRG-IPTLLLFKNGEV-A--ATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp TTGGGGTCCB-SSEEEEEESSSE-E--EEEESCCCHHHHHHHHTTT
T ss_pred HHHHHcCCCc-cCEEEEEECCEE-E--EEEeCCCCHHHHHHHHHHH
Confidence 8999999997 999999965332 1 2456777888899998753
No 353
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.86 E-value=0.0028 Score=57.30 Aligned_cols=44 Identities=20% Similarity=0.242 Sum_probs=34.9
Q ss_pred CCCcEEEEEEccccc-ccccchHHHHHHHHHhC--CCCEEEEEEEec
Q psy16770 146 YTTPHLILFYSDWCF-ACLQVEPIFKKLMDELS--PLGVGFFTVHVH 189 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~-~C~~l~p~~~~~a~~l~--~~~v~~~~Vd~~ 189 (554)
.+++++|.||.+||+ .|....+.+.++.+.++ +.++.+..|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 357999999999996 69999998888887775 335777777665
No 354
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.85 E-value=0.0057 Score=50.59 Aligned_cols=96 Identities=14% Similarity=0.190 Sum_probs=65.1
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
...++.+++++.++ .++++++.|....-+....... .......+.|..++++ .+.+++++|+|.. .|++
T Consensus 11 ~~~~~~~~f~~~~~----~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~--~~~~~~~~~~v~~-~Pt~ 83 (112)
T 1syr_A 11 KIVTSQAEFDSIIS----QNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVD--EVSEVTEKENITS-MPTF 83 (112)
T ss_dssp EEECSHHHHHHHHH----HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT--TTHHHHHHTTCCS-SSEE
T ss_pred EEECCHHHHHHHHc----cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECC--CCHHHHHHcCCCc-ccEE
Confidence 45678889999884 4677777775544333222221 1122236999999887 6788999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
++|+++.. . ....|. +.+.|.+||+..
T Consensus 84 ~~~~~G~~-~--~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 84 KVYKNGSS-V--DTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEEETTEE-E--EEEESC-CHHHHHHHHHTT
T ss_pred EEEECCcE-E--EEEeCC-CHHHHHHHHHHh
Confidence 99975322 1 234555 788899988753
No 355
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.84 E-value=0.00088 Score=62.04 Aligned_cols=45 Identities=20% Similarity=0.389 Sum_probs=39.5
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE 191 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~ 191 (554)
..++.+|+|+++||+||+++.|.+.++.+.+.+ ++.|..++..-+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~~~ 67 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVVWQ 67 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECCCS
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCCCC
Confidence 457899999999999999999999999998876 599999988643
No 356
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.82 E-value=0.0022 Score=56.59 Aligned_cols=111 Identities=16% Similarity=0.130 Sum_probs=77.0
Q ss_pred cccccccccccccccccCCCCCCcEEEE-EEcccccccccchHHHHHHHHHhCCCCEEEEEEEe--cCcHHHHHHhCCcC
Q psy16770 126 LFHKLSTTHWNFEKNYIPKSYTTPHLIL-FYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV--HNEQGLARRLGVGS 202 (554)
Q Consensus 126 ~~~~~~Lt~~~F~~~v~~~~~~~~~lV~-Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~--~~~~~l~~~~~v~~ 202 (554)
..-+.++|.+++.... ++.-+..+. |..+.-..-..+.+.+.++|+.+++ .+.|+.||. .....+.+.+|++.
T Consensus 13 ~PLV~e~t~en~~~~~---~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg-ki~Fv~vd~~~~~~~~~l~~fGl~~ 88 (147)
T 3bj5_A 13 LPLVIEFTEQTAPKIF---GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFAFIDSDHTDNQRILEFFGLKK 88 (147)
T ss_dssp --CEEECCTTTHHHHH---SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT-TCEEEEECTTCGGGHHHHHHTTCCG
T ss_pred CCeeEEeccccHHHHh---cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC-ceEEEEEecchHhHHHHHHHcCCCc
Confidence 3457778888876665 334454444 4333333345578999999999998 499999999 66677899999984
Q ss_pred -CCCcceeccC---CeEEEEeCCcccHHHHHHHHHHhCCCCc
Q psy16770 203 -QLPQIALLTD---GRTSFFKEPSFSVQKMVEFFRLKLPYKL 240 (554)
Q Consensus 203 -~~Pti~~~~~---g~~~~y~~g~~~~~~i~~fl~~~~~~~~ 240 (554)
..|++.++.. ++...+..+..+.+.|.+|+.+.+...+
T Consensus 89 ~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 89 EECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp GGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCS
T ss_pred ccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCc
Confidence 3899988853 3332223356688999999998876653
No 357
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.82 E-value=0.00089 Score=57.77 Aligned_cols=80 Identities=10% Similarity=0.194 Sum_probs=50.3
Q ss_pred cccccccccCCCCCCcEEEEEEcccccccccc-hHHHHHHHHHhCCCCEEEEEEEecCc-------HHHHHHhCCcCCCC
Q psy16770 134 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQV-EPIFKKLMDELSPLGVGFFTVHVHNE-------QGLARRLGVGSQLP 205 (554)
Q Consensus 134 ~~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l-~p~~~~~a~~l~~~~v~~~~Vd~~~~-------~~l~~~~~v~~~~P 205 (554)
.+.+++.+. .. . ++.|+++||++|+++ .+.+++... ..+.+..+|.+.+ ..+.+.+|+.+ +|
T Consensus 27 ~~~v~~~i~---~~-~-Vvvy~~~~Cp~C~~a~k~~L~~~~~----~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~t-VP 96 (129)
T 3ctg_A 27 VAHVKDLIG---QK-E-VFVAAKTYCPYCKATLSTLFQELNV----PKSKALVLELDEMSNGSEIQDALEEISGQKT-VP 96 (129)
T ss_dssp HHHHHHHHH---HS-S-EEEEECTTCHHHHHHHHHHHTTSCC----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCS-SC
T ss_pred HHHHHHHHc---CC-C-EEEEECCCCCchHHHHHHHHHhcCc----cCCCcEEEEccccCCHHHHHHHHHHHhCCCC-CC
Confidence 345555552 22 2 677999999999987 665553211 0155666676654 36888899997 99
Q ss_pred cceeccCCeEEEEeCCcccHHHHHHH
Q psy16770 206 QIALLTDGRTSFFKEPSFSVQKMVEF 231 (554)
Q Consensus 206 ti~~~~~g~~~~y~~g~~~~~~i~~f 231 (554)
++ |.+|+.+ ||. +++..+
T Consensus 97 ~v--fi~g~~i---gG~---d~l~~l 114 (129)
T 3ctg_A 97 NV--YINGKHI---GGN---SDLETL 114 (129)
T ss_dssp EE--EETTEEE---ESH---HHHHHH
T ss_pred EE--EECCEEE---cCH---HHHHHH
Confidence 96 5678643 554 445443
No 358
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.79 E-value=0.00077 Score=61.35 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=39.7
Q ss_pred CCcEEEEE-Ecccccccc-cchHHHHHHHHHhCCCCEEEEE-EEecC---cHHHHHHhCCc
Q psy16770 147 TTPHLILF-YSDWCFACL-QVEPIFKKLMDELSPLGVGFFT-VHVHN---EQGLARRLGVG 201 (554)
Q Consensus 147 ~~~~lV~F-ya~wC~~C~-~l~p~~~~~a~~l~~~~v~~~~-Vd~~~---~~~l~~~~~v~ 201 (554)
++++++.| ++.||+.|. ...|.+.+++++++..|+.+.. |..+. ....++++++.
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~ 103 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAE 103 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCT
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCC
Confidence 34455444 599999999 5889999999999877777764 76665 33455666654
No 359
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.78 E-value=0.01 Score=48.47 Aligned_cols=95 Identities=8% Similarity=0.014 Sum_probs=62.0
Q ss_pred ccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 242 VPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 242 ~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
.+.+.+++++.+.. ..++++++.|....-+..+... .+..+ +++.|..++++ .+.+++++|+|.+ .||+
T Consensus 5 ~i~~~~~~~~~~~~--~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~--~~~~~~~~~~v~~-~Pt~ 78 (107)
T 1gh2_A 5 PVGSDPDFQPELSG--AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVH--QCQGTAATNNISA-TPTF 78 (107)
T ss_dssp EECSGGGHHHHHHH--TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETT--TSHHHHHHTTCCS-SSEE
T ss_pred EecCHHHHHHHHHh--CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECc--cCHHHHHhcCCCc-ccEE
Confidence 34467889888853 2467777777654443322222 11233 57999999987 6889999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++|+++.. . ....|. ....|.+||+.
T Consensus 79 ~~~~~G~~--~-~~~~G~-~~~~l~~~l~~ 104 (107)
T 1gh2_A 79 QFFRNKVR--I-DQYQGA-DAVGLEEKIKQ 104 (107)
T ss_dssp EEEETTEE--E-EEEESS-CHHHHHHHHHH
T ss_pred EEEECCeE--E-EEEeCC-CHHHHHHHHHH
Confidence 99976432 1 123343 34458888764
No 360
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.73 E-value=0.0065 Score=53.83 Aligned_cols=99 Identities=14% Similarity=0.095 Sum_probs=66.4
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-----HHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEE
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 317 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-----~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlv 317 (554)
+-|.+++++.+.+ +.++++++-|...--++.+.. ..+.++.+.+.|+.+|.+ ..++++++|+|.. .||++
T Consensus 26 l~t~~~f~~~v~~--~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVD--e~~e~a~~y~V~s-iPT~~ 100 (160)
T 2av4_A 26 LNSGWAVDQAIVN--EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDIT--EVPDFNTMYELYD-PVSVM 100 (160)
T ss_dssp CCSHHHHHHHHHH--CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETT--TCCTTTTTTTCCS-SEEEE
T ss_pred cCCHHHHHHHHHh--cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECC--CCHHHHHHcCCCC-CCEEE
Confidence 3356888887743 357788887765544443322 223356678999999998 7899999999997 99999
Q ss_pred EEeCCCCCCCc------eeecCCCC-hhHHHhHHhc
Q psy16770 318 IFKEDKDRPSA------SITMNSIP-VPTLQDITDN 346 (554)
Q Consensus 318 vfk~~~~~~~~------~i~~~~~~-~~~l~~fi~~ 346 (554)
+|+++..-..+ ....+..+ .+.|.++|+.
T Consensus 101 fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~ 136 (160)
T 2av4_A 101 FFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVET 136 (160)
T ss_dssp EEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHH
T ss_pred EEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHH
Confidence 99875431000 01234455 7778888764
No 361
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.73 E-value=0.001 Score=55.94 Aligned_cols=59 Identities=17% Similarity=0.363 Sum_probs=42.1
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecC--c-----HHHHHHhCCcCCCCcceeccCCeEEEEeCCc
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--E-----QGLARRLGVGSQLPQIALLTDGRTSFFKEPS 222 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~--~-----~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~ 222 (554)
++.|+++||++|++..+.+++. |+.+..+|.+. + ..+.+..|..+ +|++.+ +|+ ..||.
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~t-vP~vfi--~g~---~igG~ 84 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL-------GVECNVLELDQVDDGARVQEVLSEITNQKT-VPNIFV--NKV---HVGGC 84 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTSTTHHHHHHHHHHHHSCCS-SCEEEE--TTE---EEESH
T ss_pred EEEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEecCCCChHHHHHHHHHHhCCCc-cCEEEE--CCE---EEeCH
Confidence 4559999999999888777752 46677777775 2 23667778886 999755 775 34554
No 362
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.72 E-value=0.0055 Score=60.06 Aligned_cols=100 Identities=14% Similarity=0.212 Sum_probs=70.3
Q ss_pred CCccccCCcccHHHHHhhhhcCCceEEEEEecC-------CchhHHHHHHhhccCCceEEEEEEccCCCChhHHhHhCCC
Q psy16770 238 YKLIVPLSATNVDAFLDNWREDNKVHALLFQRS-------LPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVP 310 (554)
Q Consensus 238 ~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~-------~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~ 310 (554)
...+..+|.+++++.+.. ..++++++.|... ..+.+. ..+..+.+++.|+.++++ .+++++++|+|.
T Consensus 6 ~~~v~~~~~~~f~~~~~~--~~~~~v~v~f~a~wC~~C~~~~p~~~--~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~ 79 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQ--SMTTPVLFYFWSERSQHCLQLTPILE--SLAAQYNGQFILAKLDCD--AEQMIAAQFGLR 79 (287)
T ss_dssp CTTEEECCTTTHHHHHTT--TTTSCEEEEEECTTCTTTTTTHHHHH--HHHHHHTSSSEEEEEETT--TCHHHHHTTTCC
T ss_pred CCccEECCHHHHHHHHHh--cCCCeEEEEEECCCChHHHHHHHHHH--HHHHHcCCCeEEEEEeCc--cCHHHHHHcCCC
Confidence 334677889999998853 2467777766322 222222 222345677999999998 688999999999
Q ss_pred CCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 311 GDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 311 ~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+ .||+++|+++. .. ..+.+..+...+.+|+...
T Consensus 80 ~-~Pt~~~~~~G~--~~-~~~~g~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 80 A-IPTVYLFQNGQ--PV-DGFQGPQPEEAIRALLDXV 112 (287)
T ss_dssp S-SSEEEEEETTE--EE-EEEESCCCHHHHHHHHHHH
T ss_pred C-CCeEEEEECCE--EE-EEeeCCCCHHHHHHHHHHH
Confidence 7 99999997542 21 2356777888899999865
No 363
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.72 E-value=0.0014 Score=56.17 Aligned_cols=100 Identities=12% Similarity=0.102 Sum_probs=65.4
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccC--CceEEEEEEccCCCChhHHhHhCCCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHR--TTIVFGVIVYDQEDSSSVFQRFKVPGDK 313 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~--~~v~Fg~v~~~~~~~~~l~~k~~i~~~~ 313 (554)
+..++.++++..+.. .++++++.|....-+..+... .+..+. +.+.|+.++++ .+..++++|+|.. .
T Consensus 9 v~~l~~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~-~ 82 (133)
T 2dj3_A 9 VKVVVGKTFDAIVMD---PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT--ANDITNDQYKVEG-F 82 (133)
T ss_dssp SEECCTTTCCCCCTC---TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT--TSCCCCSSCCCSS-S
T ss_pred eEEEcCCCHHHHhcc---CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC--cCHHHHhhcCCCc-C
Confidence 566777777776632 367777777544333222211 112333 57999999887 5677889999997 9
Q ss_pred ceEEEEeCCCCCCCceeec-CCCChhHHHhHHhcC
Q psy16770 314 DSLLIFKEDKDRPSASITM-NSIPVPTLQDITDNN 347 (554)
Q Consensus 314 Ptlvvfk~~~~~~~~~i~~-~~~~~~~l~~fi~~~ 347 (554)
||+++|+++.... ...+. +..+...|.+||+.+
T Consensus 83 Pt~~~~~~g~~~~-~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 83 PTIYFAPSGDKKN-PIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp SEEEEECTTCTTS-CEECCSSCCSTTHHHHHHHHH
T ss_pred CEEEEEeCCCccc-ceEecCCCcCHHHHHHHHHHh
Confidence 9999998754322 12234 557888899999865
No 364
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.70 E-value=0.01 Score=48.72 Aligned_cols=99 Identities=13% Similarity=0.147 Sum_probs=63.8
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
+.+.+.+++++.+......++++++.|....-+....... .....+++.|..++++ .+.+++++|++.+ .|++
T Consensus 7 ~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~--~~~~~~~~~~v~~-~Pt~ 83 (113)
T 1ti3_A 7 IACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVD--ELKAVAEEWNVEA-MPTF 83 (113)
T ss_dssp EEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETT--TCHHHHHHHHCSS-TTEE
T ss_pred eEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcc--ccHHHHHhCCCCc-ccEE
Confidence 3444668888888653235778888776654443332221 1122237999999887 6789999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++|+++.. . ....| .+...|.++|+.
T Consensus 84 ~~~~~G~~--~-~~~~g-~~~~~l~~~l~~ 109 (113)
T 1ti3_A 84 IFLKDGKL--V-DKTVG-ADKDGLPTLVAK 109 (113)
T ss_dssp EEEETTEE--E-EEEEC-CCTTHHHHHHHH
T ss_pred EEEeCCEE--E-EEEec-CCHHHHHHHHHH
Confidence 99975322 1 12334 466677777764
No 365
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.70 E-value=0.01 Score=47.87 Aligned_cols=94 Identities=11% Similarity=0.202 Sum_probs=61.6
Q ss_pred CCc-ccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEE
Q psy16770 244 LSA-TNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLI 318 (554)
Q Consensus 244 ~t~-~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvv 318 (554)
+++ +++++.+.. ..+++.++.|....-+....... .....+.+.|+.++++ .+.+++++|++.+ .|++++
T Consensus 4 i~~~~~~~~~l~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt~~~ 78 (104)
T 2vim_A 4 LATAADLEKLINE--NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVD--QNEEAAAKYSVTA-MPTFVF 78 (104)
T ss_dssp CCSHHHHHHHHHT--TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT--TCHHHHHHTTCCS-SSEEEE
T ss_pred cCCHHHHHHHHHh--cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEecc--CCHHHHHHcCCcc-ccEEEE
Confidence 444 778888864 25777777776544443222221 1122237999999987 6788999999997 999999
Q ss_pred EeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 319 FKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 319 fk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
|+++.. . ....| .+.+.|.+||+.
T Consensus 79 ~~~g~~--~-~~~~G-~~~~~l~~~l~~ 102 (104)
T 2vim_A 79 IKDGKE--V-DRFSG-ANETKLRETITR 102 (104)
T ss_dssp EETTEE--E-EEEES-SCHHHHHHHHHH
T ss_pred EeCCcE--E-EEEeC-CCHHHHHHHHHh
Confidence 985322 1 22344 577788888864
No 366
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.70 E-value=0.012 Score=48.54 Aligned_cols=96 Identities=7% Similarity=0.097 Sum_probs=63.6
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
+..++.+++ +.+. .+++.++.|....-+....... .....+.+.|..++++ .+.+++++|+|.+ .||+
T Consensus 5 ~~~~~~~~f-~~~~----~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt~ 76 (110)
T 2l6c_A 5 RDITTEAGM-AHFE----GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSE--ARPELMKELGFER-VPTL 76 (110)
T ss_dssp SBCGGGCSH-HHHT----TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGG--GCHHHHHHTTCCS-SCEE
T ss_pred eecCCHHHH-HHHH----cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCc--CCHHHHHHcCCcc-cCEE
Confidence 345677888 5553 3567777775544333222221 1122347899999887 6889999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
++|+++.. . ....|..+.+.|.+++...
T Consensus 77 ~~~~~G~~-v--~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 77 VFIRDGKV-A--KVFSGIMNPRELQALYASI 104 (110)
T ss_dssp EEEESSSE-E--EEEESCCCHHHHHHHHHTC
T ss_pred EEEECCEE-E--EEEcCCCCHHHHHHHHHHH
Confidence 99965432 1 2345777888899988865
No 367
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.65 E-value=0.0024 Score=55.14 Aligned_cols=96 Identities=16% Similarity=0.143 Sum_probs=61.5
Q ss_pred ccccCCcccHHHHHhhhhcCCceEEEEEecC-------CchhHHHHHHhhccCC-ceEEEEEEccCCCChhHHhHhCCC-
Q psy16770 240 LIVPLSATNVDAFLDNWREDNKVHALLFQRS-------LPVRLRYLINAFKHRT-TIVFGVIVYDQEDSSSVFQRFKVP- 310 (554)
Q Consensus 240 ~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~-------~~~~~~~~~~a~~~~~-~v~Fg~v~~~~~~~~~l~~k~~i~- 310 (554)
.+..++.+++++.+.. ...+++++.|... ..+.+.. .+.++.+ .+.|+.++++ .+.+++++|+|.
T Consensus 8 ~v~~l~~~~f~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~--l~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~ 81 (137)
T 2dj0_A 8 YIKYFNDKTIDEELER--DKRVTWIVEFFANWSNDCQSFAPIYAD--LSLKYNCTGLNFGKVDVG--RYTDVSTRYKVST 81 (137)
T ss_dssp CCEECCTTHHHHHHHH--STTSCEEEEECCTTCSTTTTTHHHHHH--HHHHHCSSSCEEEECCTT--TCHHHHHHTTCCC
T ss_pred eEEEccHhhHHHHHhc--CCCCEEEEEEECCCCHHHHHHHHHHHH--HHHHhCCCCeEEEEEeCc--cCHHHHHHccCcc
Confidence 3667788999988865 2455777777322 2222222 2224453 7999999887 688999999998
Q ss_pred -----CCCceEEEEeCCCCCCCceeecCCCChhHHHhHHh
Q psy16770 311 -----GDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 345 (554)
Q Consensus 311 -----~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~ 345 (554)
. .||+++|+++.. . ....+..+...|.+|+.
T Consensus 82 ~~~~~~-~Pt~~~~~~G~~-~--~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 82 SPLTKQ-LPTLILFQGGKE-A--MRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp CSSSSC-SSEEEEESSSSE-E--EEESCBCSSSCBCCCCC
T ss_pred cCCcCC-CCEEEEEECCEE-E--EEecCcCchHHHHHHHh
Confidence 6 999999975322 1 12345555555555554
No 368
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.59 E-value=0.015 Score=49.19 Aligned_cols=98 Identities=17% Similarity=0.165 Sum_probs=63.5
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+.+.+.+++++.+......++++++.|....-+....... +..+ ..+.|..++++ .+.+++++|+|.+ .||
T Consensus 19 ~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~d--~~~~l~~~~~v~~-~Pt 94 (124)
T 1xfl_A 19 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDTD--ELKSVASDWAIQA-MPT 94 (124)
T ss_dssp EEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHC-SSEEEEEEETT--TSHHHHHHTTCCS-SSE
T ss_pred EEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCcEEEEEECc--cCHHHHHHcCCCc-cCE
Confidence 3344668888877643235778888776544443322221 1133 37899999887 6889999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....+ .+.+.|.++|+.
T Consensus 95 ~~~~~~G~~--~-~~~~G-~~~~~l~~~l~~ 121 (124)
T 1xfl_A 95 FMFLKEGKI--L-DKVVG-AKKDELQSTIAK 121 (124)
T ss_dssp EEEEETTEE--E-EEEES-CCHHHHHHHHHH
T ss_pred EEEEECCEE--E-EEEeC-CCHHHHHHHHHH
Confidence 999975322 1 12334 467778888764
No 369
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.57 E-value=0.0095 Score=50.66 Aligned_cols=94 Identities=12% Similarity=0.176 Sum_probs=61.6
Q ss_pred cccCCc-ccHHHHHhhhhcCCceEEEEEecCCchhHHHH----H-HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 241 IVPLSA-TNVDAFLDNWREDNKVHALLFQRSLPVRLRYL----I-NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 241 v~~~t~-~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~----~-~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
+..+++ +++++.+. .++++++.|....-+..... . .+..+ +.+.|..++++ .+.+++++|+|.. .|
T Consensus 21 v~~l~~~~~f~~~~~----~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~d--~~~~l~~~~~v~~-~P 92 (125)
T 1r26_A 21 VVDVYSVEQFRNIMS----EDILTVAWFTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDAD--NNSEIVSKCRVLQ-LP 92 (125)
T ss_dssp CEEECCHHHHHHHHH----SSSCEEEEEECTTCHHHHHTHHHHHHHHHHC-TTSEEEEEETT--TCHHHHHHTTCCS-SS
T ss_pred eEECCCHHHHHHHHc----cCCEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECC--CCHHHHHHcCCCc-cc
Confidence 455666 88888883 46677777754433322211 1 11233 56999999987 6889999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
|+++|+++.. . ....+ .+...|.++|+.
T Consensus 93 t~~i~~~G~~--~-~~~~G-~~~~~l~~~l~~ 120 (125)
T 1r26_A 93 TFIIARSGKM--L-GHVIG-ANPGMLRQKLRD 120 (125)
T ss_dssp EEEEEETTEE--E-EEEES-SCHHHHHHHHHH
T ss_pred EEEEEeCCeE--E-EEEeC-CCHHHHHHHHHH
Confidence 9999975432 1 12344 566778887763
No 370
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.56 E-value=0.00079 Score=62.14 Aligned_cols=43 Identities=21% Similarity=0.468 Sum_probs=36.5
Q ss_pred CCcEEEEEEcccccccccchHHH---HHHHHHhCCCCEEEEEEEecC
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHN 190 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~~~ 190 (554)
.++.+|+|++.||+||+++.|.+ .++.+.+.+ +++|..++..-
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEechh
Confidence 46899999999999999999986 677777765 58898888775
No 371
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.55 E-value=0.012 Score=48.74 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=63.5
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHh----hccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA----FKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a----~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
+.+.+.+++++.+......++++++.|....-+........ ....+.+.|..++++ .+.+++++|++.+ .|++
T Consensus 9 ~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt~ 85 (118)
T 2vm1_A 9 IACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVD--ELKDVAEAYNVEA-MPTF 85 (118)
T ss_dssp EECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT--TSHHHHHHTTCCS-BSEE
T ss_pred EEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcc--cCHHHHHHcCCCc-CcEE
Confidence 34446788888886532246777777765444433322211 112237899999887 6789999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++|+++.. . ....| .+...|.++|+.
T Consensus 86 ~~~~~g~~--~-~~~~g-~~~~~l~~~l~~ 111 (118)
T 2vm1_A 86 LFIKDGEK--V-DSVVG-GRKDDIHTKIVA 111 (118)
T ss_dssp EEEETTEE--E-EEEES-CCHHHHHHHHHH
T ss_pred EEEeCCeE--E-EEecC-CCHHHHHHHHHH
Confidence 99975332 1 12334 466778887764
No 372
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=96.48 E-value=0.0077 Score=51.23 Aligned_cols=83 Identities=13% Similarity=0.094 Sum_probs=58.1
Q ss_pred CCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecC
Q psy16770 259 DNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMN 333 (554)
Q Consensus 259 ~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~ 333 (554)
.++++++.|....-+..+... .+..+.+++.|..++++ .+.+++++|+|.+ .||+++|+++.. . ....|
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d--~~~~l~~~~~v~~-~Pt~~~~~~G~~-~--~~~~G 114 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLD--KNESLARKFSVKS-LPTIILLKNKTM-L--ARKDH 114 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGG--GCHHHHHHTTCCS-SSEEEEEETTEE-E--EEESS
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECC--CCHHHHHHcCCCC-cCEEEEEECCEE-E--EEecC
Confidence 577888877554433322221 11244568999999988 6889999999997 999999965322 1 34567
Q ss_pred CCChhHHHhHHhcC
Q psy16770 334 SIPVPTLQDITDNN 347 (554)
Q Consensus 334 ~~~~~~l~~fi~~~ 347 (554)
..+.+.|.+||+.+
T Consensus 115 ~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 115 FVSSNDLIALIKKH 128 (128)
T ss_dssp CCCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhC
Confidence 78888999998753
No 373
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.48 E-value=0.011 Score=49.34 Aligned_cols=98 Identities=12% Similarity=0.113 Sum_probs=61.4
Q ss_pred CCCccccCC-cccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCC
Q psy16770 237 PYKLIVPLS-ATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVP 310 (554)
Q Consensus 237 ~~~~v~~~t-~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~ 310 (554)
|+..+..++ .+++++.++ .++++++.|....-+..+... .+..+.+ +.|..++++ .+.+++++|+|.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~----~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~--~~~~l~~~~~v~ 82 (114)
T 2oe3_A 10 SYTSITKLTNLTEFRNLIK----QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVD--ESPDIAKECEVT 82 (114)
T ss_dssp CGGGSCBCCSHHHHHHHHH----HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCC
T ss_pred chhheeecCCHHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHCCCC
Confidence 333344444 466777664 467777777544333222211 1223334 999999887 678999999999
Q ss_pred CCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 311 GDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 311 ~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
. .|++++|+++.. . ....|.. .+.|.++|+.
T Consensus 83 ~-~Pt~~~~~~G~~--~-~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 83 A-MPTFVLGKDGQL--I-GKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp S-BSEEEEEETTEE--E-EEEESSC-HHHHHHHHHT
T ss_pred c-ccEEEEEeCCeE--E-EEEeCCC-HHHHHHHHHh
Confidence 7 999999975432 1 2244555 7788888864
No 374
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.47 E-value=0.0096 Score=50.08 Aligned_cols=93 Identities=13% Similarity=0.102 Sum_probs=60.6
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-----hhccCCc-eEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-----AFKHRTT-IVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-----a~~~~~~-v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
+.+.+++++.+ ..++++++.|....-+....... +..+.+. +.|..++++ .+.+++++|+|.+ .||+
T Consensus 20 i~~~~~f~~~l----~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d--~~~~~~~~~~v~~-~Pt~ 92 (121)
T 2j23_A 20 ISSYDQFKQVT----GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVD--EQSQIAQEVGIRA-MPTF 92 (121)
T ss_dssp CCSHHHHHHHH----SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETT--TCHHHHHHHTCCS-SSEE
T ss_pred cCCHHHHHHHH----cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECc--CCHHHHHHcCCCc-ccEE
Confidence 33558888888 35677777775544333222221 1133333 899999887 6789999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++|+++.. . ....|. +.+.|.+||+.
T Consensus 93 ~~~~~G~~--~-~~~~G~-~~~~l~~~l~~ 118 (121)
T 2j23_A 93 VFFKNGQK--I-DTVVGA-DPSKLQAAITQ 118 (121)
T ss_dssp EEEETTEE--E-EEEESS-CHHHHHHHHHH
T ss_pred EEEECCeE--E-eeEcCC-CHHHHHHHHHH
Confidence 99975322 1 223455 77888888864
No 375
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.43 E-value=0.013 Score=55.18 Aligned_cols=99 Identities=15% Similarity=0.210 Sum_probs=69.5
Q ss_pred ccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 240 LIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 240 ~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
.+..+|++++++.+. ..++++++.|....-++.+... .+..+.+.+.|+.++++ .+.+++++|+|.+ .|
T Consensus 13 ~~~~lt~~~f~~~v~---~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d--~~~~l~~~~~v~~-~P 86 (222)
T 3dxb_A 13 KIIHLTDDSFDTDVL---KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID--QNPGTAPKYGIRG-IP 86 (222)
T ss_dssp CCEECCTTTHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCTTTGGGGTCCS-BS
T ss_pred CceeCCHHHHHHHHH---hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECC--CCHHHHHHcCCCc-CC
Confidence 466788999988543 2467777777544433322221 22255667999999987 6888999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
|+++|+++.. .....|..+...|.+|++..
T Consensus 87 t~~~~~~G~~---~~~~~G~~~~~~l~~~l~~~ 116 (222)
T 3dxb_A 87 TLLLFKNGEV---AATKVGALSKGQLKEFLDAN 116 (222)
T ss_dssp EEEEEETTEE---EEEEESCCCHHHHHHHHHHH
T ss_pred EEEEEECCeE---EEEeccccChHHHHHHHHhh
Confidence 9999985322 12456778888999998754
No 376
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.41 E-value=0.02 Score=47.03 Aligned_cols=93 Identities=14% Similarity=0.158 Sum_probs=61.0
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHh----hccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEE
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA----FKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLI 318 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a----~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvv 318 (554)
..+.+++++.+. .++++++.|....-+..+..... .+....+.|..++++ .+.+++++|+|.+ .||+++
T Consensus 11 ~~~~~~f~~~~~----~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~--~~~~l~~~~~v~~-~Pt~~~ 83 (109)
T 3f3q_A 11 FKTASEFDSAIA----QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVD--ELGDVAQKNEVSA-MPTLLL 83 (109)
T ss_dssp CCSHHHHHHHTT----SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT--TCHHHHHHTTCCS-SSEEEE
T ss_pred CCCHHHHHHHHh----cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECC--CCHHHHHHcCCCc-cCEEEE
Confidence 445677887773 47788887755444433322211 122345899999887 6889999999997 999999
Q ss_pred EeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 319 FKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 319 fk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
|+++ ... ....|. ..+.|.++|+.
T Consensus 84 ~~~G-~~~--~~~~G~-~~~~l~~~i~~ 107 (109)
T 3f3q_A 84 FKNG-KEV--AKVVGA-NPAAIKQAIAA 107 (109)
T ss_dssp EETT-EEE--EEEESS-CHHHHHHHHHH
T ss_pred EECC-EEE--EEEeCC-CHHHHHHHHHh
Confidence 9843 211 123344 55788888764
No 377
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.017 Score=47.42 Aligned_cols=97 Identities=11% Similarity=0.157 Sum_probs=59.3
Q ss_pred ccCCc-ccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----Hhhcc-CCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 242 VPLSA-TNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKH-RTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 242 ~~~t~-~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~-~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
..+++ +++++.+.. ...++++++.|....-+..+... .+..+ .+.+.|..++++ .+.+++++|+|.+ .|
T Consensus 3 ~~i~~~~~~~~~~~~-~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~-~P 78 (112)
T 3d6i_A 3 IEINDQEQFTYLTTT-AAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDAD--ENSEISELFEISA-VP 78 (112)
T ss_dssp EEECCHHHHHHHHTT-TTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETT--TCHHHHHHTTCCS-SS
T ss_pred cccCCHHHHHHHHhc-ccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecc--cCHHHHHHcCCCc-cc
Confidence 34455 788888853 12467777777544333222221 11122 356999999987 6889999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
|+++|+++.. . ....|. ....|.++|+.
T Consensus 79 t~~~~~~G~~--~-~~~~G~-~~~~l~~~l~~ 106 (112)
T 3d6i_A 79 YFIIIHKGTI--L-KELSGA-DPKEYVSLLED 106 (112)
T ss_dssp EEEEEETTEE--E-EEECSC-CHHHHHHHHHH
T ss_pred EEEEEECCEE--E-EEecCC-CHHHHHHHHHH
Confidence 9999975322 1 123344 34457777764
No 378
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.32 E-value=0.0016 Score=59.93 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=35.0
Q ss_pred CCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEec
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH 189 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~ 189 (554)
+++.+|+|++.||+||+++.|.++++.+.+ ++.|..++..
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA---GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH---TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh---CCeEEEEecc
Confidence 578999999999999999999999999988 3677777765
No 379
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.31 E-value=0.029 Score=45.94 Aligned_cols=97 Identities=8% Similarity=0.067 Sum_probs=62.3
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH----hh-ccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN----AF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~----a~-~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..++.+++++.+.. ..++++++.|....-+..+.... .. .+ ..+.|..++++. .+.+++++|+|.+ .||
T Consensus 7 v~~l~~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~-~~v~~~~vd~~~-~~~~~~~~~~v~~-~Pt 81 (111)
T 2pu9_C 7 VTEVNKDTFWPIVKA--AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEY-LDVIFLKLDCNQ-ENKTLAKELGIRV-VPT 81 (111)
T ss_dssp EEEECTTTHHHHHTT--CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEECSS-TTHHHHHHHCCSB-SSE
T ss_pred cEEechHHHHHHHHh--cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHC-CCeEEEEEecCc-chHHHHHHcCCCe-eeE
Confidence 566788899888853 24677777775544333322221 11 33 358999998752 4678999999997 999
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+++.. . ....|. ....|.++|+.
T Consensus 82 ~~~~~~G~~--~-~~~~G~-~~~~l~~~l~~ 108 (111)
T 2pu9_C 82 FKILKENSV--V-GEVTGA-KYDKLLEAIQA 108 (111)
T ss_dssp EEEESSSSE--E-EEEESS-CHHHHHHHHHH
T ss_pred EEEEeCCcE--E-EEEcCC-CHHHHHHHHHH
Confidence 998875432 1 123343 46678887764
No 380
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.31 E-value=0.026 Score=46.81 Aligned_cols=95 Identities=11% Similarity=0.225 Sum_probs=62.8
Q ss_pred cccCCc-ccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHh-----hccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 241 IVPLSA-TNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA-----FKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 241 v~~~t~-~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a-----~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
+..+++ +++++.++.. .++++++.|....-+..+..... ..+ .+.|..++++ .+.+++++|+|.+ .|
T Consensus 15 v~~l~~~~~~~~~l~~~--~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~--~~~~~~~~~~v~~-~P 87 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQH--KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVD--KLEETARKYNISA-MP 87 (117)
T ss_dssp EEECCSTTHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETT--TSHHHHHHTTCCS-SS
T ss_pred eEEeCCHHHHHHHHHhC--CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECC--ccHHHHHHcCCCc-cc
Confidence 344555 8888888642 56777777765444433322221 123 7889999887 6889999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
|+++|+++.. . ....| .+...|.++|+.
T Consensus 88 t~~~~~~G~~-~--~~~~G-~~~~~l~~~l~~ 115 (117)
T 2xc2_A 88 TFIAIKNGEK-V--GDVVG-ASIAKVEDMIKK 115 (117)
T ss_dssp EEEEEETTEE-E--EEEES-SCHHHHHHHHHH
T ss_pred eEEEEeCCcE-E--EEEeC-CCHHHHHHHHHH
Confidence 9999975422 1 12344 567778888764
No 381
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.23 E-value=0.021 Score=47.76 Aligned_cols=98 Identities=9% Similarity=0.036 Sum_probs=60.2
Q ss_pred CcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEE
Q psy16770 245 SATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 319 (554)
Q Consensus 245 t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvf 319 (554)
+.+++++.+.. .++++++.|....-+..+... .+..+ +.+.|..++++ .+.+++++|+|.+ .|++++|
T Consensus 11 ~~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~--~~~~~~~~~~i~~-~Pt~~~~ 83 (118)
T 2f51_A 11 THEALLNRIKE---APGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVD--KNGNAADAYGVSS-IPALFFV 83 (118)
T ss_dssp CHHHHHHHHHH---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETT--TCHHHHHHTTCCS-SSEEEEE
T ss_pred CHHHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECC--CCHHHHHhcCCCC-CCEEEEE
Confidence 55677654432 467777777554433322222 11234 78999999987 6889999999997 9999999
Q ss_pred eCCCC-CCCceeecCCCChhHHHhHHhcCCCc
Q psy16770 320 KEDKD-RPSASITMNSIPVPTLQDITDNNPYL 350 (554)
Q Consensus 320 k~~~~-~~~~~i~~~~~~~~~l~~fi~~~~~~ 350 (554)
+++.. ........|. ....|.+.+..+..+
T Consensus 84 ~~~~~~G~~~~~~~G~-~~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 84 KKEGNEIKTLDQFVGA-DVSRIKADIEKFKHH 114 (118)
T ss_dssp EEETTEEEEEEEEESC-CHHHHHHHHHHHC--
T ss_pred eCCCCcceEEEeecCC-CHHHHHHHHHHhhhc
Confidence 76211 1111123444 445688888776544
No 382
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.20 E-value=0.027 Score=49.49 Aligned_cols=97 Identities=12% Similarity=0.134 Sum_probs=62.9
Q ss_pred ccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEE
Q psy16770 242 VPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 317 (554)
Q Consensus 242 ~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlv 317 (554)
.+.+.+++++.+... .++++++.|....-+..+.... .....+.+.|+.++++ .+.+++++|+|.+ .|+++
T Consensus 16 ~l~~~~~~~~~~~~~--~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt~~ 90 (153)
T 2wz9_A 16 EVGSAGQFEELLRLK--AKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAE--GVPEVSEKYEISS-VPTFL 90 (153)
T ss_dssp EECSHHHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT--TSHHHHHHTTCCS-SSEEE
T ss_pred EcCCHHHHHHHHHhc--CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECC--CCHHHHHHcCCCC-CCEEE
Confidence 333468888888642 3677777775544333322221 1122357999999987 6889999999997 99999
Q ss_pred EEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 318 IFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 318 vfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+|+++ . .. ....| .....|.+||+..
T Consensus 91 ~~~~G-~-~~-~~~~G-~~~~~l~~~i~~~ 116 (153)
T 2wz9_A 91 FFKNS-Q-KI-DRLDG-AHAPELTKKVQRH 116 (153)
T ss_dssp EEETT-E-EE-EEEES-SCHHHHHHHHHHH
T ss_pred EEECC-E-EE-EEEeC-CCHHHHHHHHHHH
Confidence 99843 2 11 12334 4566788888754
No 383
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.19 E-value=0.012 Score=49.12 Aligned_cols=94 Identities=11% Similarity=0.058 Sum_probs=62.3
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHh---hccCCceEEEEEEccCCCCh----hHHhHhCCCCCCce
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA---FKHRTTIVFGVIVYDQEDSS----SVFQRFKVPGDKDS 315 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a---~~~~~~v~Fg~v~~~~~~~~----~l~~k~~i~~~~Pt 315 (554)
+.|.+++++.++ .+++++++|...--++.+..... +...+++.|+++|++ ... +++++|+|.+..|+
T Consensus 11 i~s~e~f~~ii~----~~~~vvi~khatwCgpc~~~~~~~e~~~~~~~v~~~~vdVd--e~r~~Sn~IA~~~~V~h~sPq 84 (112)
T 3iv4_A 11 LSSIDQFEQVIE----ENKYVFVLKHSETCPISANAYDQFNKFLYERDMDGYYLIVQ--QERDLSDYIAKKTNVKHESPQ 84 (112)
T ss_dssp CCSHHHHHHHHH----HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTCCEEEEEGG--GGHHHHHHHHHHHTCCCCSSE
T ss_pred cCCHHHHHHHHh----cCCCEEEEEECCcCHhHHHHHHHHHHHhccCCceEEEEEee--cCchhhHHHHHHhCCccCCCe
Confidence 346688988885 37888888865443333322221 111368999999987 453 48999999965899
Q ss_pred EEEEeCCCCCCCceeecCCCChhHHHhHH
Q psy16770 316 LLIFKEDKDRPSASITMNSIPVPTLQDIT 344 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~~~~~~~l~~fi 344 (554)
+++|+++.. ....+.+.++...|.+.+
T Consensus 85 ~il~k~G~~--v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 85 AFYFVNGEM--VWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEETTEE--EEEEEGGGCSHHHHHHHT
T ss_pred EEEEECCEE--EEEeeccccCHHHHHHhh
Confidence 999997543 222456777777776544
No 384
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.17 E-value=0.031 Score=48.15 Aligned_cols=106 Identities=10% Similarity=0.137 Sum_probs=59.7
Q ss_pred ccccccchhhhhhcCCCCceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCCCccc
Q psy16770 351 TLPRISSQSMLDAVCPVKKLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEI 429 (554)
Q Consensus 351 ~v~~lt~~~~~~~~c~~~~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~~~~~ 429 (554)
.+.+++.+++...+...++ .+|.|. +....+....+.+.+++++ +.+ .+.|+.+|++...++++.+-.
T Consensus 34 ~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~--~~~-~v~~~~vd~~~~~~l~~~~~v------- 102 (140)
T 1v98_A 34 WVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARD--HAG-RLKVVKVNVDEHPGLAARYGV------- 102 (140)
T ss_dssp ---------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHH--TTT-TEEEEEEETTTCHHHHHHTTC-------
T ss_pred ccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHH--ccC-ceEEEEEECCCCHHHHHHCCC-------
Confidence 4455665555544432334 555554 4556677788899999988 864 499999999999999988711
Q ss_pred cceEEEEEEecCCCeeEEEecCCCCCcccccchhhHHHHHHHHhhhcCC
Q psy16770 430 SLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDP 478 (554)
Q Consensus 430 ~~~~~~v~~~~~~~~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~ 478 (554)
..+|.+.... ++.....+.|. .+.+.|.+||+++++|+
T Consensus 103 -~~~Pt~~~~~-~G~~~~~~~G~---------~~~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 103 -RSVPTLVLFR-RGAPVATWVGA---------SPRRVLEERLRPYLEGR 140 (140)
T ss_dssp -CSSSEEEEEE-TTEEEEEEESC---------CCHHHHHHHHHHHHTCC
T ss_pred -CccCEEEEEe-CCcEEEEEeCC---------CCHHHHHHHHHHHHccC
Confidence 2334332222 33222233442 36789999999998764
No 385
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.16 E-value=0.031 Score=47.08 Aligned_cols=99 Identities=9% Similarity=0.052 Sum_probs=63.4
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecC-------CchhHHHHH-----HhhccCCceEEEEEEccC-----CCChhH
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRS-------LPVRLRYLI-----NAFKHRTTIVFGVIVYDQ-----EDSSSV 303 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~-------~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~-----~~~~~l 303 (554)
+...+.+++++.+... .++++++.|... --++.+... .+..+.+.+.|..++++. ..+..+
T Consensus 7 v~~~~~~~~~~~~~~~--~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQH--NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTT--TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHh--CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHH
Confidence 3445677788777542 367888877665 433332222 122455689999998831 257789
Q ss_pred HhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 304 FQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 304 ~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+++|+|.+ .||+++|++. .. ...........|.+||+.
T Consensus 85 ~~~~~i~~-~Pt~~~~~~~-~~---~~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTA-VPTLLKYGTP-QK---LVESECLQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCS-SSEEEETTSS-CE---EEGGGGGCHHHHHHHHHC
T ss_pred HHHCCCCe-eCEEEEEcCC-ce---EeccccCCHHHHHHHHhc
Confidence 99999997 9999999762 21 222233456678888764
No 386
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=96.09 E-value=0.01 Score=55.73 Aligned_cols=88 Identities=13% Similarity=0.184 Sum_probs=63.9
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
++++++.|| ++||+.|....+.+.+...+++..|+.+..|.++. +.++++.
T Consensus 52 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~ 131 (216)
T 3sbc_A 52 GKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRD 131 (216)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHH
Confidence 467888899 99999999999999999999987789998888764 3478999
Q ss_pred hCCcC-----CCCcceec-cCCeEE--EEe--CCcccHHHHHHHHHH
Q psy16770 198 LGVGS-----QLPQIALL-TDGRTS--FFK--EPSFSVQKMVEFFRL 234 (554)
Q Consensus 198 ~~v~~-----~~Pti~~~-~~g~~~--~y~--~g~~~~~~i~~fl~~ 234 (554)
|||-. .++.+.++ .+|.+. ..+ .-.|+.++++..+..
T Consensus 132 YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 132 YGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEA 178 (216)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred cCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 98832 13444444 677652 222 122578888776654
No 387
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.05 E-value=0.022 Score=48.92 Aligned_cols=102 Identities=13% Similarity=0.151 Sum_probs=63.8
Q ss_pred CccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 239 KLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 239 ~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
.++.+.+.+++++.+......++++++.|....-+..+.... .....+.+.|..++++ .+.+++++|+|.+ .|
T Consensus 25 ~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~--~~~~~~~~~~v~~-~P 101 (139)
T 3d22_A 25 NVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVD--ELSDFSASWEIKA-TP 101 (139)
T ss_dssp TCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT--TSHHHHHHTTCCE-ES
T ss_pred cEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCc--ccHHHHHHcCCCc-cc
Confidence 334444678888877532124677777775544333222221 1111257999999987 6889999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
++++|+++.. . ....|. +...|.++|+..
T Consensus 102 t~~~~~~G~~--~-~~~~G~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 102 TFFFLRDGQQ--V-DKLVGA-NKPELHKKITAI 130 (139)
T ss_dssp EEEEEETTEE--E-EEEESC-CHHHHHHHHHHH
T ss_pred EEEEEcCCeE--E-EEEeCC-CHHHHHHHHHHH
Confidence 9999965322 1 223444 667788888643
No 388
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=95.97 E-value=0.045 Score=45.81 Aligned_cols=98 Identities=8% Similarity=0.071 Sum_probs=62.8
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH----hhccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN----AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~----a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
+..++++++++.+.. ..++++++.|....-++.+.... ..+....+.|..++++. .+.+++++|+|.+ .||+
T Consensus 20 v~~l~~~~~~~~~~~--~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~-~~~~~~~~~~v~~-~Pt~ 95 (124)
T 1faa_A 20 VTEVNKDTFWPIVKA--AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQ-ENKTLAKELGIRV-VPTF 95 (124)
T ss_dssp EEEECTTTHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSS-TTHHHHHHHCCSS-SSEE
T ss_pred eEEecchhHHHHHHh--cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCc-chHHHHHHcCCCe-eeEE
Confidence 566788888888764 25677777776544443332221 11112358899998752 3678999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++|+++.. . ....|. ..+.|.++|+.
T Consensus 96 ~~~~~G~~--~-~~~~G~-~~~~l~~~i~~ 121 (124)
T 1faa_A 96 KILKENSV--V-GEVTGA-KYDKLLEAIQA 121 (124)
T ss_dssp EEEETTEE--E-EEEESS-CHHHHHHHHHH
T ss_pred EEEeCCcE--E-EEEcCC-CHHHHHHHHHH
Confidence 99976432 1 123343 36778887764
No 389
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=95.95 E-value=0.019 Score=54.28 Aligned_cols=85 Identities=15% Similarity=0.167 Sum_probs=56.9
Q ss_pred CCcEEEEEEccc-ccccc-----cchHHHHHHHHHhCCCCEEEEEEEecC-----------------------cHHHHHH
Q psy16770 147 TTPHLILFYSDW-CFACL-----QVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fya~w-C~~C~-----~l~p~~~~~a~~l~~~~v~~~~Vd~~~-----------------------~~~l~~~ 197 (554)
+++++|.||+.| |+.|. ...|.+.+. + .|+.+..|.++. +..+++.
T Consensus 48 Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak~ 122 (224)
T 3keb_A 48 HTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHKR 122 (224)
T ss_dssp TCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHHHH
T ss_pred CCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHHHH
Confidence 468899999888 99999 767777665 4 357777776653 2467778
Q ss_pred hCCcC--------CCCcceec-cCCeEEEEe-----CCcccHHHHHHHHHHhC
Q psy16770 198 LGVGS--------QLPQIALL-TDGRTSFFK-----EPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 198 ~~v~~--------~~Pti~~~-~~g~~~~y~-----~g~~~~~~i~~fl~~~~ 236 (554)
||+.. ..|+..++ ++|++.... .+..+.+++.+.+....
T Consensus 123 yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 123 YGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp TTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred hCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 88752 04777777 578764322 13346677777776543
No 390
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.95 E-value=0.2 Score=53.50 Aligned_cols=172 Identities=10% Similarity=0.062 Sum_probs=107.2
Q ss_pred CCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeE--EEEeCCcc-
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT--SFFKEPSF- 223 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~--~~y~~g~~- 223 (554)
.+++.+.++.+.|..|..+....++++.. .+ ++.+...| ... .. .|++.+.++|+. +.|.|-+.
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~-~i~~~~~~--~~~--------~~-~p~~~~~~~~~~~~i~f~g~p~g 84 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAEL-SD-KVTFKEDN--TLP--------VR-KPSFLITNPGSQQGPRFAGSPLG 84 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTT-CT-TEEEEECT--TSS--------SC-SSEEEEECTTCCCSCEEESCCCG
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHHh-CC-ceEEEEcC--Ccc--------cC-CCEEEEecCCCcceEEEeccCcc
Confidence 34666777788899999888888887654 33 36663322 110 43 899999877743 67776432
Q ss_pred -cHHHHHHHHHHhCCCCccccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccC
Q psy16770 224 -SVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQ 297 (554)
Q Consensus 224 -~~~~i~~fl~~~~~~~~v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~ 297 (554)
....++.-+....+.+ ..++++.++...+ .+.+..+..|....-++..... .+.. .+++.|..++.+
T Consensus 85 ~e~~s~~~~l~~~~~~~--~~~~~~~~~~i~~---~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~-~~~v~~~~vd~~- 157 (521)
T 1hyu_A 85 HEFTSLVLALLWTGGHP--SKEAQSLLEQIRD---IDGDFEFETYYSLSCHNCPDVVQALNLMAVL-NPRIKHTAIDGG- 157 (521)
T ss_dssp GGHHHHHHHHHHHTTCC--CCSCHHHHHHHHH---CCSCEEEEEEECTTCSSHHHHHHHHHHHHHH-CTTEEEEEEETT-
T ss_pred hhHHHHHHHHHhhcCCC--CCCCHHHHHHHHh---cCCCcceEEEECCCCcCcHHHHHHHHHHHhH-cCceEEEEEech-
Confidence 3344554454555444 2345555555432 2345556666443333322221 1223 348999999877
Q ss_pred CCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 298 EDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 298 ~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
..++++++|+|.+ .|++++ + .+ .+..+.++...|.+|+...
T Consensus 158 -~~~~~~~~~~i~s-vPt~~i--~-g~----~~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 158 -TFQNEITERNVMG-VPAVFV--N-GK----EFGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp -TCHHHHHHTTCCS-SSEEEE--T-TE----EEEESCCCHHHHHHHHCCS
T ss_pred -hhHHHHHHhCCCc-cCEEEE--C-CE----EEecCCCCHHHHHHHHhhc
Confidence 7899999999997 999987 2 22 2344778888999998764
No 391
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.90 E-value=0.047 Score=47.84 Aligned_cols=99 Identities=15% Similarity=0.088 Sum_probs=63.9
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEE
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 317 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlv 317 (554)
..+.+++++.+.. ..++++++.|...--++.+... .+..+.+.+.|+.++++ .+.+++++|+|.+ .||++
T Consensus 8 i~~~~~~~~~i~~--~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d--~~~~l~~~~~v~~-~Pt~~ 82 (149)
T 3gix_A 8 LTSKKEVDQAIKS--TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVD--QTAVYTQYFDISY-IPSTV 82 (149)
T ss_dssp ECSHHHHHHHHHH--CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETT--TCCHHHHHTTCCS-SSEEE
T ss_pred cCCHHHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECC--cCHHHHHHcCCCc-cCeEE
Confidence 3466778877752 2467778877544333322221 22245667999999987 6889999999997 99999
Q ss_pred EEeCCCCCC------CceeecC-CCChhHHHhHHhc
Q psy16770 318 IFKEDKDRP------SASITMN-SIPVPTLQDITDN 346 (554)
Q Consensus 318 vfk~~~~~~------~~~i~~~-~~~~~~l~~fi~~ 346 (554)
+|+++.... ......+ ..+.+.|.++|+.
T Consensus 83 ~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~ 118 (149)
T 3gix_A 83 FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 118 (149)
T ss_dssp EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHH
T ss_pred EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHH
Confidence 998743210 0012345 5677778877764
No 392
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=95.76 E-value=0.064 Score=45.82 Aligned_cols=101 Identities=10% Similarity=0.050 Sum_probs=65.1
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH------H--hhccCCceEEEEEEccC--CCChhHHhHhCCCCC
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI------N--AFKHRTTIVFGVIVYDQ--EDSSSVFQRFKVPGD 312 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~------~--a~~~~~~v~Fg~v~~~~--~~~~~l~~k~~i~~~ 312 (554)
..+.++++..++.. .++++++.|....-+..+... . +..+ ..+.|..++++. ..+.+++++|+|.+
T Consensus 16 ~~~~~~~~~~l~~~--~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~-~~~~~~~vd~~~~~~~~~~l~~~~~v~~- 91 (134)
T 2fwh_A 16 IKTVDELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKAL-ADTVLLQANVTANDAQDVALLKHLNVLG- 91 (134)
T ss_dssp CCSHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHT-TTSEEEEEECTTCCHHHHHHHHHTTCCS-
T ss_pred ecCHHHHHHHHHHh--cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHh-cCcEEEEEeCCCCcchHHHHHHHcCCCC-
Confidence 44567777777543 367777777654444433322 1 1133 358999998853 13567999999997
Q ss_pred CceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 313 KDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 313 ~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
.|++++|..++.........|..+.+.|.++++..
T Consensus 92 ~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 92 LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred CCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 99999995433322112467788888899988754
No 393
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=95.64 E-value=0.035 Score=46.19 Aligned_cols=96 Identities=15% Similarity=0.137 Sum_probs=62.2
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCC-----ceEEEEEEccCCCChhHHhHhCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRT-----TIVFGVIVYDQEDSSSVFQRFKVP 310 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~-----~v~Fg~v~~~~~~~~~l~~k~~i~ 310 (554)
+..++.+++++.+. ..++++++.|....-+..+... .+..+.+ .+.|+.++++. + .+++ +|.
T Consensus 9 v~~l~~~~f~~~v~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~--~-~~~~--~v~ 80 (121)
T 2djj_A 9 VTVVVAKNYNEIVL---DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA--N-DVPD--EIQ 80 (121)
T ss_dssp SEECCTTTTTTSSS---CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT--S-CCSS--CCS
T ss_pred eEEecccCHHHHhh---cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc--c-cccc--ccC
Confidence 55677788877653 2466777777544333222211 1223444 79999999873 2 2555 898
Q ss_pred CCCceEEEEeCCCCC-CCceeecCCCChhHHHhHHhcC
Q psy16770 311 GDKDSLLIFKEDKDR-PSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 311 ~~~Ptlvvfk~~~~~-~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+ .||+++|+++... . ..+.+..+.+.|.+||+.+
T Consensus 81 ~-~Pt~~~~~~~~~~~~--~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 81 G-FPTIKLYPAGAKGQP--VTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp S-SSEEEEECSSCTTSC--CCCCCCSCHHHHHHHHHHT
T ss_pred c-CCeEEEEeCcCCCCc--eEecCCCCHHHHHHHHHhc
Confidence 7 9999999875442 2 3456778888999999865
No 394
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=95.51 E-value=0.034 Score=47.01 Aligned_cols=102 Identities=9% Similarity=0.029 Sum_probs=63.3
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHh-------h-ccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA-------F-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a-------~-~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
.+++.++++.+......++++++.|....-+..+..... . .+...+.+..++++...+..++++|+|.+ .|
T Consensus 10 ~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~-~P 88 (130)
T 2kuc_A 10 AFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHA-YP 88 (130)
T ss_dssp CCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCS-SC
T ss_pred CcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCC-CC
Confidence 346677777664321246777777755433332222111 1 22346778888776434678999999997 99
Q ss_pred eEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 315 SLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 315 tlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
++++|.++.... ....|..+...|.++|+..
T Consensus 89 t~~~~d~~G~~~--~~~~G~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 89 TLLFINSSGEVV--YRLVGAEDAPELLKKVKLG 119 (130)
T ss_dssp EEEEECTTSCEE--EEEESCCCHHHHHHHHHHH
T ss_pred EEEEECCCCcEE--EEecCCCCHHHHHHHHHHH
Confidence 999995433321 2356777888888888754
No 395
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.49 E-value=0.05 Score=46.55 Aligned_cols=99 Identities=6% Similarity=0.031 Sum_probs=61.1
Q ss_pred cccCC-cccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhh-cc--CCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 241 IVPLS-ATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KH--RTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 241 v~~~t-~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~-~~--~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
+..++ .+++++.++.. .++++++.|....-++.+.....+ ++ .-.+.|..++++ .+.+++++|+|.+ .||+
T Consensus 22 v~~l~~~~~~~~~l~~~--~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt~ 96 (133)
T 3cxg_A 22 YIELKNTGSLNQVFSST--QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYYYVTLVDIDVD--IHPKLNDQHNIKA-LPTF 96 (133)
T ss_dssp EEECCCTTHHHHHHTC---CCSEEEEEEECTTCHHHHHTHHHHHGGGGTEECEEEEEETT--TCHHHHHHTTCCS-SSEE
T ss_pred EEEecChhHHHHHHHhc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCEEEEEEecc--chHHHHHhcCCCC-CCEE
Confidence 33444 47888888642 356778877554444333322222 11 115788888876 6889999999997 9999
Q ss_pred EEEe--CCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 317 LIFK--EDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 317 vvfk--~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++|+ ++..... ....|. +...|.++|+.
T Consensus 97 ~~~~~~~g~g~~~-~~~~G~-~~~~l~~~l~~ 126 (133)
T 3cxg_A 97 EFYFNLNNEWVLV-HTVEGA-NQNDIEKAFQK 126 (133)
T ss_dssp EEEEEETTEEEEE-EEEESC-CHHHHHHHHHH
T ss_pred EEEEecCCCeEEE-EEEcCC-CHHHHHHHHHH
Confidence 9996 4321121 123344 67778888764
No 396
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=95.45 E-value=0.11 Score=43.55 Aligned_cols=92 Identities=15% Similarity=0.138 Sum_probs=63.1
Q ss_pred CceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEe--cccchHHHHhhCCCCCCccccceEEEEEEecCCC-
Q psy16770 368 KKLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVF--IEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKK- 443 (554)
Q Consensus 368 ~~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd--~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 443 (554)
++..+|.|. .....+......+.+++++ ++ +.+.|+.+| .+...++++.+ .. ..+|.++..+.++
T Consensus 26 ~k~~lv~f~a~wC~~C~~~~~~l~~~~~~--~~-~~v~~~~v~~~~d~~~~~~~~~-------~v-~~~Pt~~~~~~~G~ 94 (126)
T 2l57_A 26 GIPTIIMFKTDTCPYCVEMQKELSYVSKE--RE-GKFNIYYARLEEEKNIDLAYKY-------DA-NIVPTTVFLDKEGN 94 (126)
T ss_dssp SSCEEEEEECSSCHHHHHHHHHHHHHHHH--SS-SSCEEEEEETTSSHHHHHHHHT-------TC-CSSSEEEEECTTCC
T ss_pred CCcEEEEEECCCCccHHHHHHHHHHHHHH--hc-CCeEEEEEeCCCCchHHHHHHc-------CC-cceeEEEEECCCCC
Confidence 345555554 4556677788889999988 86 469999999 88888888887 11 3556555555444
Q ss_pred eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 444 IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 444 ~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
..+ .+.|. .+.+.|.++|++.+.....
T Consensus 95 ~~~-~~~G~---------~~~~~l~~~l~~~~~~~~~ 121 (126)
T 2l57_A 95 KFY-VHQGL---------MRKNNIETILNSLGVKEGH 121 (126)
T ss_dssp EEE-EEESC---------CCHHHHHHHHHHHCCCCCC
T ss_pred EEE-EecCC---------CCHHHHHHHHHHHhccccc
Confidence 333 23442 4678999999998877654
No 397
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=95.23 E-value=0.011 Score=53.57 Aligned_cols=54 Identities=15% Similarity=0.247 Sum_probs=41.6
Q ss_pred CcEEEEEEccccccccc-chHHHHHHHHHhCCCCE-EEEEEEecC---cHHHHHHhCCc
Q psy16770 148 TPHLILFYSDWCFACLQ-VEPIFKKLMDELSPLGV-GFFTVHVHN---EQGLARRLGVG 201 (554)
Q Consensus 148 ~~~lV~Fya~wC~~C~~-l~p~~~~~a~~l~~~~v-~~~~Vd~~~---~~~l~~~~~v~ 201 (554)
..+|+.|++.||+.|.. -.|.|.+.+++++..|+ .+..|.++. ....+++.++.
T Consensus 49 ~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~ 107 (176)
T 4f82_A 49 RVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTA 107 (176)
T ss_dssp EEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCT
T ss_pred eEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCC
Confidence 35666777999999999 99999999999987778 888887765 33445555543
No 398
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.22 E-value=0.019 Score=48.42 Aligned_cols=92 Identities=20% Similarity=0.230 Sum_probs=58.0
Q ss_pred CcccHHHHHhhhhcCCceEEEEEecC-------CchhHHHHHHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEE
Q psy16770 245 SATNVDAFLDNWREDNKVHALLFQRS-------LPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLL 317 (554)
Q Consensus 245 t~~~~~~fl~~~~~~~~~~v~~f~~~-------~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlv 317 (554)
+.+++++.+......++++++.|... ..+.+... +..+ ..+.|..++++ .+.+++++|+|.. .|+++
T Consensus 21 ~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~--~~~~-~~v~~~~v~~~--~~~~~~~~~~v~~-~Pt~~ 94 (130)
T 1wmj_A 21 NKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEY--AKKF-PGAVFLKVDVD--ELKEVAEKYNVEA-MPTFL 94 (130)
T ss_dssp SSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHH--HHHC-TTBCCEECCTT--TSGGGHHHHTCCS-SCCCC
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHH--HHHC-CCCEEEEEecc--chHHHHHHcCCCc-cceEE
Confidence 55788888865323467777777332 22222222 2233 36888888876 6789999999997 99999
Q ss_pred EEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 318 IFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 318 vfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
+|+++.. . . ...+ .+.+.|.++|+.
T Consensus 95 ~~~~g~~-~-~-~~~g-~~~~~l~~~l~~ 119 (130)
T 1wmj_A 95 FIKDGAE-A-D-KVVG-ARKDDLQNTIVK 119 (130)
T ss_dssp BCTTTTC-C-B-CCCT-TCTTTHHHHHHH
T ss_pred EEeCCeE-E-E-EEeC-CCHHHHHHHHHH
Confidence 9965432 1 1 2233 455667777764
No 399
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=95.19 E-value=0.039 Score=51.86 Aligned_cols=89 Identities=16% Similarity=0.310 Sum_probs=63.4
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC----------------------------cHHHHHH
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------------EQGLARR 197 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~----------------------------~~~l~~~ 197 (554)
++.+++.|| ++||+.|......|.+...+++..|+.+..|.++. +..+|+.
T Consensus 56 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~ 135 (219)
T 3tue_A 56 GKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARS 135 (219)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHHHH
Confidence 457888899 89999999999999999999998889999888764 3468889
Q ss_pred hCCcC---CCC--cceec-cCCeEE--EEe--CCcccHHHHHHHHHHh
Q psy16770 198 LGVGS---QLP--QIALL-TDGRTS--FFK--EPSFSVQKMVEFFRLK 235 (554)
Q Consensus 198 ~~v~~---~~P--ti~~~-~~g~~~--~y~--~g~~~~~~i~~fl~~~ 235 (554)
||+-. .++ .+.++ .+|.+. ..+ .-.++.++++..++..
T Consensus 136 yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 136 YGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred cCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 98742 122 23333 677652 222 1225778887777643
No 400
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.18 E-value=0.089 Score=48.74 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=32.3
Q ss_pred CCCCCCcEEEEEEcccccccccchHHH-HHHHHHhC-CCCEEEEEEEe
Q psy16770 143 PKSYTTPHLILFYSDWCFACLQVEPIF-KKLMDELS-PLGVGFFTVHV 188 (554)
Q Consensus 143 ~~~~~~~~lV~Fya~wC~~C~~l~p~~-~~~a~~l~-~~~v~~~~Vd~ 188 (554)
.....++.+|+|+...|++|+++.+.. ..+.+.+- ..+++|...+.
T Consensus 25 G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 25 GKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred cCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 334566789999999999999998875 45555553 22477766643
No 401
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=95.13 E-value=0.061 Score=45.64 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=58.3
Q ss_pred ccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-------hhccCCceEEEEEEccC-CCChhHHhHhCC---CCCCce
Q psy16770 247 TNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-------AFKHRTTIVFGVIVYDQ-EDSSSVFQRFKV---PGDKDS 315 (554)
Q Consensus 247 ~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-------a~~~~~~v~Fg~v~~~~-~~~~~l~~k~~i---~~~~Pt 315 (554)
+++++.+......++++++.|...--+..+.... +..+.+++.|..++++. ..+.+++++|+| .+ .|+
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~-~Pt 94 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDG-IPA 94 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGC-SSE
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCc-cce
Confidence 4566555433245778888775443333222211 11334678999998821 268899999999 87 999
Q ss_pred EEEEeCCCCCCCceeecC-------CCChhHHHhHHh
Q psy16770 316 LLIFKEDKDRPSASITMN-------SIPVPTLQDITD 345 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~-------~~~~~~l~~fi~ 345 (554)
+++|..++... ....+ .++.+.+.+|++
T Consensus 95 ~~~~d~~G~~~--~~~~g~~~~~~~~~~~~~l~~~l~ 129 (133)
T 3fk8_A 95 VVVVNSDGKVR--YTTKGGELANARKMSDQGIYDFFA 129 (133)
T ss_dssp EEEECTTSCEE--EECCSCTTTTGGGSCHHHHHHHHH
T ss_pred EEEECCCCCEE--EEecCCcccccccCCHHHHHHHHH
Confidence 99995433311 11222 456777888775
No 402
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=95.08 E-value=0.013 Score=61.44 Aligned_cols=78 Identities=12% Similarity=0.032 Sum_probs=52.7
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-----HHhhccC---C-----ceEEEEEEccCCCChhHHhHh
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHR---T-----TIVFGVIVYDQEDSSSVFQRF 307 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-----~~a~~~~---~-----~v~Fg~v~~~~~~~~~l~~k~ 307 (554)
+..++.+++++.+.. ...+++++.|...--++.+.. ..+..+. + .+.|+.++++ .+.+++++|
T Consensus 25 V~~Lt~~~F~~~l~~--~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d--~~~~la~~y 100 (470)
T 3qcp_A 25 VVDLSGDDFSRVHRV--APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA--SEVDLCRKY 100 (470)
T ss_dssp EEECSCSCGGGTCTT--GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT--TCHHHHHHT
T ss_pred cEECCHHHHHHHHHh--CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC--CCHHHHHHc
Confidence 667788899888754 234677776644332222211 1122333 2 5999999998 688999999
Q ss_pred CCCCCCceEEEEeCCC
Q psy16770 308 KVPGDKDSLLIFKEDK 323 (554)
Q Consensus 308 ~i~~~~Ptlvvfk~~~ 323 (554)
+|.+ +||+++|+++.
T Consensus 101 ~V~~-~PTlilf~~gg 115 (470)
T 3qcp_A 101 DINF-VPRLFFFYPRD 115 (470)
T ss_dssp TCCS-SCEEEEEEESS
T ss_pred CCCc-cCeEEEEECCC
Confidence 9997 99999997643
No 403
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=94.04 E-value=0.0039 Score=50.42 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=56.7
Q ss_pred ccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 242 VPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 242 ~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
..++.+++.+.+. ..+++++++|....-+...... .+..+.+.+.|..++++ .+.+++++|++.. .|++
T Consensus 4 ~~l~~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~-~Pt~ 77 (106)
T 2yj7_A 4 IEVTDENFEQEVL---KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVD--ENPNTAAQYGIRS-IPTL 77 (106)
Confidence 3455666654442 2455666666433222211111 11134457888888876 6788999999997 9999
Q ss_pred EEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 317 LIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 317 vvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++|+++.. . ....|..+.+.|.+|++.
T Consensus 78 ~~~~~g~~-~--~~~~g~~~~~~l~~~l~~ 104 (106)
T 2yj7_A 78 LLFKNGQV-V--DRLVGAQPKEALKERIDK 104 (106)
Confidence 99964322 1 133455566667777653
No 404
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=94.96 E-value=0.087 Score=44.29 Aligned_cols=99 Identities=12% Similarity=0.036 Sum_probs=61.3
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..+|.+++.+.+... +.++++++.|....-++.+... .+.++ ..++|..++++. .+++|+|.. .||
T Consensus 5 v~~it~~~f~~~v~~~-~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~-~~v~f~kvd~d~-----~~~~~~v~~-~PT 76 (118)
T 3evi_A 5 LREISGNQYVNEVTNA-EEDVWVIIHLYRSSIPMCLLVNQHLSLLARKF-PETKFVKAIVNS-----CIQHYHDNC-LPT 76 (118)
T ss_dssp CEECCGGGHHHHTTTC-CTTCEEEEEEECTTSHHHHHHHHHHHHHHHHC-TTSEEEEEEGGG-----TSTTCCGGG-CSE
T ss_pred eEEeCHHHHHHHHHhc-CCCCeEEEEEeCCCChHHHHHHHHHHHHHHHC-CCCEEEEEEhHH-----hHHHCCCCC-CCE
Confidence 3456788887766431 1234777777554444333222 22243 569999998752 268999997 999
Q ss_pred EEEEeCCCCCCCcee-----ecCCCChhHHHhHHhcCC
Q psy16770 316 LLIFKEDKDRPSASI-----TMNSIPVPTLQDITDNNP 348 (554)
Q Consensus 316 lvvfk~~~~~~~~~i-----~~~~~~~~~l~~fi~~~~ 348 (554)
+++|+++.. ..... -...++.+.|+.++..+.
T Consensus 77 ~~~fk~G~~-v~~~~G~~~~gg~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 77 IFVYKNGQI-EAKFIGIIECGGINLKLEELEWKLAEVG 113 (118)
T ss_dssp EEEEETTEE-EEEEESTTTTTCSSCCHHHHHHHHHTTT
T ss_pred EEEEECCEE-EEEEeChhhhCCCCCCHHHHHHHHHHcC
Confidence 999998432 11111 123578889999998654
No 405
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=94.92 E-value=0.073 Score=45.55 Aligned_cols=96 Identities=9% Similarity=0.099 Sum_probs=62.4
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHh----hccCCceEEEEEEccC-------CCChhHHhHhCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA----FKHRTTIVFGVIVYDQ-------EDSSSVFQRFKV 309 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a----~~~~~~v~Fg~v~~~~-------~~~~~l~~k~~i 309 (554)
+..++.+++++.+. . ++++.|...--++.+..... .+..+ +.|..++++. ..+.+++++|+|
T Consensus 18 v~~l~~~~~~~~~~----~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v 90 (135)
T 3emx_A 18 LIYITPEEFRQLLQ----G--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGV 90 (135)
T ss_dssp EEECCHHHHHHHHT----S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred eeecCHHHHHHHhC----C--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCC
Confidence 45668888888773 2 66666654443433322211 11122 8899998822 156789999999
Q ss_pred CCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 310 PGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 310 ~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
.+ .||+++|+++.. . ....|..+.+.+..+++..
T Consensus 91 ~~-~Pt~~~~~~G~~-v--~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 91 EG-TPTLVFYKEGRI-V--DKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp CS-SSEEEEEETTEE-E--EEEESCCCHHHHHHHHHHH
T ss_pred ce-eCeEEEEcCCEE-E--EEEeCCCCHHHHHHHHHHH
Confidence 97 999999995322 1 2456777888888888754
No 406
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=94.76 E-value=0.095 Score=45.44 Aligned_cols=73 Identities=12% Similarity=0.128 Sum_probs=49.9
Q ss_pred CcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEE
Q psy16770 245 SATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 319 (554)
Q Consensus 245 t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvf 319 (554)
+.+++++.+.. ..++++++.|...--++.+... .+..+.+.+.|+.++++ .+.+++++|+|.+ .||+++|
T Consensus 10 ~~~~~~~~v~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d--~~~~~~~~~~i~~-~Pt~~~~ 84 (142)
T 1qgv_A 10 NGWQVDQAILS--EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDIT--EVPDFNKMYELYD-PCTVMFF 84 (142)
T ss_dssp SHHHHHHHHHT--CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETT--TCCTTTTSSCSCS-SCEEEEE
T ss_pred CHHHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccc--cCHHHHHHcCCCC-CCEEEEE
Confidence 55777766542 1467777877544333322221 22245677999999987 6788999999997 9999999
Q ss_pred eCC
Q psy16770 320 KED 322 (554)
Q Consensus 320 k~~ 322 (554)
+++
T Consensus 85 ~~G 87 (142)
T 1qgv_A 85 FRN 87 (142)
T ss_dssp ETT
T ss_pred ECC
Confidence 864
No 407
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=94.65 E-value=0.046 Score=45.42 Aligned_cols=95 Identities=9% Similarity=0.144 Sum_probs=57.7
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH-----hhccCCceEEEEEEccCCC----ChhHHhHhCCCC
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-----AFKHRTTIVFGVIVYDQED----SSSVFQRFKVPG 311 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~-----a~~~~~~v~Fg~v~~~~~~----~~~l~~k~~i~~ 311 (554)
+..++.+++++.+. .++++++.|....-+..+.... +..+... +.+++.+... ..+++++|+|.+
T Consensus 14 ~~~~~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~i~~ 87 (118)
T 1zma_A 14 LEVTTVVRAQEALD----KKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH--IYFINSEEPSQLNDLQAFRSRYGIPT 87 (118)
T ss_dssp SEECCHHHHHHHHH----TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC--CEEEETTCGGGHHHHHHHHHHHTCCS
T ss_pred hhcCCHHHHHHHHh----CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCe--EEEEECCCcCcHHHHHHHHHHcCCCC
Confidence 34567788887774 3567777775544443333221 1123333 4445443211 246889999997
Q ss_pred CCceEEEEeCCCCCCCceeecCCCChhHHHhHHh
Q psy16770 312 DKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 345 (554)
Q Consensus 312 ~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~ 345 (554)
.||+++|+++.. . ....|..+.+.|.+||+
T Consensus 88 -~Pt~~~~~~G~~-~--~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 88 -VPGFVHITDGQI-N--VRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp -SCEEEEEETTEE-E--EECCTTCCHHHHHHHHT
T ss_pred -CCeEEEEECCEE-E--EEecCCCCHHHHHHHhh
Confidence 999999975432 1 24567778888988885
No 408
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=94.58 E-value=0.025 Score=48.95 Aligned_cols=60 Identities=18% Similarity=0.260 Sum_probs=40.7
Q ss_pred cEEEEEEc-----ccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHH----HhCCcCCCCcceeccCCeEEEEe
Q psy16770 149 PHLILFYS-----DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLAR----RLGVGSQLPQIALLTDGRTSFFK 219 (554)
Q Consensus 149 ~~lV~Fya-----~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~----~~~v~~~~Pti~~~~~g~~~~y~ 219 (554)
.++| |.. |||++|++....+. ..++.+..+|.+.++.+.. ..|..+ +|.+ |.+|+. .
T Consensus 36 ~Vvv-y~ks~~~~~~Cp~C~~ak~~L~-------~~gv~y~~vdI~~d~~~~~~L~~~~G~~t-vP~V--fI~G~~---i 101 (135)
T 2wci_A 36 PILL-YMKGSPKLPSCGFSAQAVQALA-------ACGERFAYVDILQNPDIRAELPKYANWPT-FPQL--WVDGEL---V 101 (135)
T ss_dssp SEEE-EESBCSSSBSSHHHHHHHHHHH-------TTCSCCEEEEGGGCHHHHHHHHHHHTCCS-SCEE--EETTEE---E
T ss_pred CEEE-EEEecCCCCCCccHHHHHHHHH-------HcCCceEEEECCCCHHHHHHHHHHHCCCC-cCEE--EECCEE---E
Confidence 4455 555 99999998776655 3367888999988765544 457775 8875 557863 4
Q ss_pred CCc
Q psy16770 220 EPS 222 (554)
Q Consensus 220 ~g~ 222 (554)
||.
T Consensus 102 GG~ 104 (135)
T 2wci_A 102 GGC 104 (135)
T ss_dssp ESH
T ss_pred ECh
Confidence 564
No 409
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.49 E-value=0.013 Score=50.17 Aligned_cols=73 Identities=11% Similarity=0.273 Sum_probs=44.4
Q ss_pred ccccccccCCCCCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc-------HHHHHHhCCcCCCCcc
Q psy16770 135 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-------QGLARRLGVGSQLPQI 207 (554)
Q Consensus 135 ~~F~~~v~~~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~-------~~l~~~~~v~~~~Pti 207 (554)
++|++.+. .+ + ++.|..+||++|++....+.+. ...++.+..+|.+.. ..+.+..|... +|++
T Consensus 5 ~~~~~ii~---~~-~-Vvvysk~~Cp~C~~ak~lL~~~----~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~t-VP~I 74 (127)
T 3l4n_A 5 KEYSLILD---LS-P-IIIFSKSTCSYSKGMKELLENE----YQFIPNYYIIELDKHGHGEELQEYIKLVTGRGT-VPNL 74 (127)
T ss_dssp HHHHHHHT---SC-S-EEEEECTTCHHHHHHHHHHHHH----EEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCS-SCEE
T ss_pred HHHHHHHc---cC-C-EEEEEcCCCccHHHHHHHHHHh----cccCCCcEEEEecCCCCHHHHHHHHHHHcCCCC-cceE
Confidence 34566552 22 3 6779999999999988777752 111234555665542 12334458886 9987
Q ss_pred eeccCCeEEEEeCCc
Q psy16770 208 ALLTDGRTSFFKEPS 222 (554)
Q Consensus 208 ~~~~~g~~~~y~~g~ 222 (554)
. .+|+ ..||.
T Consensus 75 f--I~G~---~IGG~ 84 (127)
T 3l4n_A 75 L--VNGV---SRGGN 84 (127)
T ss_dssp E--ETTE---ECCCH
T ss_pred E--ECCE---EEcCH
Confidence 4 4775 34664
No 410
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.43 E-value=0.17 Score=43.25 Aligned_cols=99 Identities=11% Similarity=0.047 Sum_probs=59.9
Q ss_pred cccCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCce
Q psy16770 241 IVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 315 (554)
Q Consensus 241 v~~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Pt 315 (554)
+..+|.+++.+.+... +.++++++.|...--++.+... .+.++ ..+.|+.++++. . .++|+|.. .||
T Consensus 12 v~~i~~~~~~~~v~~~-~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-~~v~~~~vd~~~--~---~~~~~i~~-~Pt 83 (135)
T 2dbc_A 12 LREISGNQYVNEVTNA-EKDLWVVIHLYRSSVPMCLVVNQHLSVLARKF-PETKFVKAIVNS--C---IEHYHDNC-LPT 83 (135)
T ss_dssp CEECCHHHHHHHTTTC-CSSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-SSEEEEEECCSS--S---CSSCCSSC-CSE
T ss_pred eEEcCHHHHHHHHHhc-CCCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCcEEEEEEhhc--C---cccCCCCC-CCE
Confidence 4455888888877542 2346777877544433322221 12233 578999997753 2 27899997 999
Q ss_pred EEEEeCCCCCCCceeecC-----CCChhHHHhHHhcCC
Q psy16770 316 LLIFKEDKDRPSASITMN-----SIPVPTLQDITDNNP 348 (554)
Q Consensus 316 lvvfk~~~~~~~~~i~~~-----~~~~~~l~~fi~~~~ 348 (554)
+++|+++.. .....-.. .++...|..++..+.
T Consensus 84 ~~~~~~G~~-v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 84 IFVYKNGQI-EGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EEEESSSSC-SEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEEECCEE-EEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 999985432 21111111 246778999888764
No 411
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=94.40 E-value=0.083 Score=49.57 Aligned_cols=102 Identities=11% Similarity=0.026 Sum_probs=63.0
Q ss_pred cccC-CcccHHHHHhhhhcCCceEEEEEecCCchhHHHHH-----HhhccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 241 IVPL-SATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLI-----NAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 241 v~~~-t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~-----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
+..+ +.+++.+.+... ..++++++.|....-++.+... .+..+ ..+.|+.++++ +..++++|+|.+ .|
T Consensus 101 v~~i~~~~~f~~~v~~~-~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~-~~v~f~~vd~~---~~~l~~~~~i~~-~P 174 (217)
T 2trc_P 101 VYELETGEQFLETIEKE-QKVTTIVVNIYEDGVRGCDALNSSLECLAAEY-PMVKFCKIRAS---NTGAGDRFSSDV-LP 174 (217)
T ss_dssp EEECCSHHHHHHHHHHS-CTTCEEEEEEECTTSTTHHHHHHHHHHHHTTC-TTSEEEEEEHH---HHTCSTTSCGGG-CS
T ss_pred EEEcCCHHHHHHHHHhc-CCCcEEEEEEECCCCccHHHHHHHHHHHHHHC-CCeEEEEEECC---cHHHHHHCCCCC-CC
Confidence 3444 678888877542 2246777777554433332222 22233 57999999885 667899999997 99
Q ss_pred eEEEEeCCCCCCCce---ee--cCCCChhHHHhHHhcCCC
Q psy16770 315 SLLIFKEDKDRPSAS---IT--MNSIPVPTLQDITDNNPY 349 (554)
Q Consensus 315 tlvvfk~~~~~~~~~---i~--~~~~~~~~l~~fi~~~~~ 349 (554)
|+++|+++.. ...+ .. ...+....|..||..+..
T Consensus 175 Tl~~~~~G~~-v~~~~G~~~~~g~~~~~~~Le~~L~~~g~ 213 (217)
T 2trc_P 175 TLLVYKGGEL-ISNFISVAEQFAEDFFAADVESFLNEYGL 213 (217)
T ss_dssp EEEEEETTEE-EEEETTGGGGSCSSCCHHHHHHHHHTTTC
T ss_pred EEEEEECCEE-EEEEeCCcccCcccCCHHHHHHHHHHcCC
Confidence 9999986422 1111 00 123445789999987643
No 412
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.26 E-value=0.047 Score=42.97 Aligned_cols=56 Identities=20% Similarity=0.358 Sum_probs=39.3
Q ss_pred EEEEEcc----cccccccchHHHHHHHHHhCCCCEEEEEEEec-----CcH----HHHHHhCCc-----CCCCcceeccC
Q psy16770 151 LILFYSD----WCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----NEQ----GLARRLGVG-----SQLPQIALLTD 212 (554)
Q Consensus 151 lV~Fya~----wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~-----~~~----~l~~~~~v~-----~~~Pti~~~~~ 212 (554)
++.|+.+ ||++|++....+++ .++.+..+|.+ .++ .+.+..|.. + +|++.+ .+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~t-vP~v~i-~~ 72 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLT-MPQVFA-PD 72 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCC-SCEEEC-TT
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH-------cCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCc-cCEEEE-EC
Confidence 4568889 99999887766553 25677788887 553 466777887 7 887643 36
Q ss_pred CeE
Q psy16770 213 GRT 215 (554)
Q Consensus 213 g~~ 215 (554)
|+.
T Consensus 73 g~~ 75 (87)
T 1aba_A 73 GSH 75 (87)
T ss_dssp SCE
T ss_pred CEE
Confidence 754
No 413
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=94.21 E-value=0.023 Score=52.30 Aligned_cols=42 Identities=26% Similarity=0.585 Sum_probs=34.6
Q ss_pred CCcEEEEEEcccccccccchHHH---HHHHHHhCCCCEEEEEEEec
Q psy16770 147 TTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVH 189 (554)
Q Consensus 147 ~~~~lV~Fya~wC~~C~~l~p~~---~~~a~~l~~~~v~~~~Vd~~ 189 (554)
.++.+|+|+..||+||+++.|.+ .++.+.+.+ ++++..++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEecc
Confidence 46899999999999999999986 688888865 4777777754
No 414
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=94.18 E-value=0.14 Score=51.21 Aligned_cols=86 Identities=12% Similarity=0.042 Sum_probs=57.6
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEEEEEEEecC---------------------cHHHHHHhCCcC--
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------EQGLARRLGVGS-- 202 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~---------------------~~~l~~~~~v~~-- 202 (554)
++++++.|| +.||+.|....+.|.+ .+..++.+..|+++. +..+++.|||-+
T Consensus 24 Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~ 99 (322)
T 4eo3_A 24 GKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENG 99 (322)
T ss_dssp TSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETT
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCC
Confidence 468889999 6799999887777753 122257777777654 447888888842
Q ss_pred -CCCcceec-cCCeEE-EEeC--CcccHHHHHHHHHHhC
Q psy16770 203 -QLPQIALL-TDGRTS-FFKE--PSFSVQKMVEFFRLKL 236 (554)
Q Consensus 203 -~~Pti~~~-~~g~~~-~y~~--g~~~~~~i~~fl~~~~ 236 (554)
.+|+..++ ++|.+. .+++ ....++++.+++.+..
T Consensus 100 ~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp EECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred cCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 26666666 788764 2332 2235688888887653
No 415
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.74 E-value=0.081 Score=43.89 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=36.8
Q ss_pred EEEEEEcccccccc------cchHHHHHHHHHhCCCCEEEEEEEecCcHHHH----HHh--------CCcCCCCcceecc
Q psy16770 150 HLILFYSDWCFACL------QVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA----RRL--------GVGSQLPQIALLT 211 (554)
Q Consensus 150 ~lV~Fya~wC~~C~------~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~----~~~--------~v~~~~Pti~~~~ 211 (554)
-++.|+.+||+.|+ ++...++ ..++.+..+|.+.++.+. +++ |... +|.| |.
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~-------~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~t-vP~v--fi 78 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLE-------ANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPL-PPQI--FN 78 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHH-------HTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCC-SCEE--EE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHH-------HcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCC-CCEE--EE
Confidence 46678999999998 4444333 336889999998876543 333 5554 7765 45
Q ss_pred CCe
Q psy16770 212 DGR 214 (554)
Q Consensus 212 ~g~ 214 (554)
+|+
T Consensus 79 ~g~ 81 (111)
T 2ct6_A 79 GDR 81 (111)
T ss_dssp TTE
T ss_pred CCE
Confidence 775
No 416
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=93.68 E-value=0.049 Score=43.55 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=44.3
Q ss_pred EEEEEccccccc------ccchHHHHHHHHHhCCCCEEEEEEEecCcHH----HHHHhC--CcCCCCcceeccCCeEEEE
Q psy16770 151 LILFYSDWCFAC------LQVEPIFKKLMDELSPLGVGFFTVHVHNEQG----LARRLG--VGSQLPQIALLTDGRTSFF 218 (554)
Q Consensus 151 lV~Fya~wC~~C------~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~----l~~~~~--v~~~~Pti~~~~~g~~~~y 218 (554)
++.|+++||+.| ++....++ ..|+.+..+|.+.++. +.+..| ... +|.+ |.+|+ +
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~-------~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~-vP~i--fi~g~---~ 70 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD-------GKRIQYQLVDISQDNALRDEMRTLAGNPKAT-PPQI--VNGNH---Y 70 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH-------HTTCCCEEEETTSCHHHHHHHHHHTTCTTCC-SCEE--EETTE---E
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH-------HCCCceEEEECCCCHHHHHHHHHHhCCCCCC-CCEE--EECCE---E
Confidence 566899999999 55544433 3367888999987743 445667 666 9976 44675 4
Q ss_pred eCCcccHHHHHHHHH
Q psy16770 219 KEPSFSVQKMVEFFR 233 (554)
Q Consensus 219 ~~g~~~~~~i~~fl~ 233 (554)
.||. +++.++.+
T Consensus 71 igG~---d~l~~l~~ 82 (93)
T 1t1v_A 71 CGDY---ELFVEAVE 82 (93)
T ss_dssp EEEH---HHHHHHHH
T ss_pred EeCH---HHHHHHHh
Confidence 4553 55655543
No 417
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=93.38 E-value=0.11 Score=50.13 Aligned_cols=78 Identities=24% Similarity=0.392 Sum_probs=52.7
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe------------------cCcHHHHHHhCCcCCC--Ccce
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV------------------HNEQGLARRLGVGSQL--PQIA 208 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~------------------~~~~~l~~~~~v~~~~--Pti~ 208 (554)
..+..|.+++|++|.+....+++.+... ++....++. ..+..+.+++|.++ + |.++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~t-VyTPqI~ 119 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNG-VYTPQAI 119 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSC-CCSSEEE
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCc-ccCCEEE
Confidence 5677799999999999999998887764 342222232 22345788999996 8 8865
Q ss_pred eccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 209 LLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 209 ~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
+ +|+.. .+|. +.+.|.+.+.+.
T Consensus 120 I--ng~~~--v~G~-d~~~l~~~l~~~ 141 (270)
T 2axo_A 120 L--NGRDH--VKGA-DVRGIYDRLDAF 141 (270)
T ss_dssp E--TTTEE--EETT-CHHHHHHHHHHH
T ss_pred E--CCEEe--ecCC-CHHHHHHHHHHh
Confidence 5 67642 2454 457777777643
No 418
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=93.11 E-value=0.063 Score=44.65 Aligned_cols=66 Identities=17% Similarity=0.261 Sum_probs=44.4
Q ss_pred EEEEEc-----ccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHH----HhCCcCCCCcceeccCCeEEEEeCC
Q psy16770 151 LILFYS-----DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLAR----RLGVGSQLPQIALLTDGRTSFFKEP 221 (554)
Q Consensus 151 lV~Fya-----~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~----~~~v~~~~Pti~~~~~g~~~~y~~g 221 (554)
+|.|.. +||++|++....+.+ .|+.+..+|.+.++.+.+ ..|... +|.+ |.+|+ +.||
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~-------~gi~y~~~di~~d~~~~~~l~~~~g~~t-vP~i--fi~g~---~iGG 84 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHK-------HNIQFSSFDIFSDEEVRQGLKAYSSWPT-YPQL--YVSGE---LIGG 84 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHHHHTCCS-SCEE--EETTE---EEEC
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHH-------cCCCeEEEECcCCHHHHHHHHHHHCCCC-CCEE--EECCE---EEec
Confidence 445778 999999987766653 357788889887765533 347775 8886 44774 4466
Q ss_pred cccHHHHHHHH
Q psy16770 222 SFSVQKMVEFF 232 (554)
Q Consensus 222 ~~~~~~i~~fl 232 (554)
. +++..+.
T Consensus 85 ~---d~l~~l~ 92 (111)
T 3zyw_A 85 L---DIIKELE 92 (111)
T ss_dssp H---HHHHHHH
T ss_pred H---HHHHHHH
Confidence 4 5555544
No 419
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=92.70 E-value=0.054 Score=51.48 Aligned_cols=68 Identities=16% Similarity=0.383 Sum_probs=47.5
Q ss_pred cEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc---HHHHHHhCCcCCCCcceeccCCeEEEEeCCcccH
Q psy16770 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE---QGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSV 225 (554)
Q Consensus 149 ~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~---~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~ 225 (554)
..++.|..+||++|++....+++. ++.+-.+|.+.+ ..+.+.+|..+ +|++. .+|+. .||.
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~~~~~~~~l~~~~g~~~-vP~~~--~~g~~---i~g~--- 233 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHDK-------GLSFEEIILGHDATIVSVRAVSGRTT-VPQVF--IGGKH---IGGS--- 233 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHH-------TCCCEEEETTTTCCHHHHHHHTCCSS-SCEEE--ETTEE---EESH---
T ss_pred ceEEEEECCCChHHHHHHHHHHHc-------CCceEEEECCCchHHHHHHHHhCCCC-cCEEE--ECCEE---EECH---
Confidence 447779999999999887777642 456667777665 34788899997 99975 46753 3443
Q ss_pred HHHHHHH
Q psy16770 226 QKMVEFF 232 (554)
Q Consensus 226 ~~i~~fl 232 (554)
++|.+|+
T Consensus 234 ~~i~~~l 240 (241)
T 1nm3_A 234 DDLEKYF 240 (241)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 5666554
No 420
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=92.48 E-value=0.39 Score=36.60 Aligned_cols=54 Identities=7% Similarity=0.084 Sum_probs=40.9
Q ss_pred ccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 283 KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 283 ~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
++.+.+.|..++++ .+.+++++|++.+ .|++++ ++ + . ...|..+.+.|.++++.
T Consensus 30 ~~~~~~~~~~vd~~--~~~~~~~~~~v~~-~Pt~~~--~G-~-~---~~~G~~~~~~l~~~l~~ 83 (85)
T 1fo5_A 30 EMPDAVEVEYINVM--ENPQKAMEYGIMA-VPTIVI--NG-D-V---EFIGAPTKEALVEAIKK 83 (85)
T ss_dssp HCSSSEEEEEEESS--SSCCTTTSTTTCC-SSEEEE--TT-E-E---ECCSSSSSHHHHHHHHH
T ss_pred HcCCceEEEEEECC--CCHHHHHHCCCcc-cCEEEE--CC-E-E---eeecCCCHHHHHHHHHH
Confidence 45568999999987 5778999999997 999998 22 2 1 34566677788888864
No 421
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=92.32 E-value=0.48 Score=45.20 Aligned_cols=103 Identities=11% Similarity=0.014 Sum_probs=63.3
Q ss_pred cccC-CcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-----HHhhccCCceEEEEEEccCCCChhHHhHhCCCCCCc
Q psy16770 241 IVPL-SATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 314 (554)
Q Consensus 241 v~~~-t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-----~~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~P 314 (554)
+..+ +.+++.+.+... ..++++++.|....-++.+.. ..+..+ ..+.|+.++++ ...++++|+|.+ .|
T Consensus 114 V~ei~s~~~f~~~v~~~-~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~-~~v~f~kVd~d---~~~l~~~~~I~~-~P 187 (245)
T 1a0r_P 114 VYELESGEQFLETIEKE-QKITTIVVHIYEDGIKGCDALNSSLICLAAEY-PMVKFCKIKAS---NTGAGDRFSSDV-LP 187 (245)
T ss_dssp EEECCSHHHHHHHHHSS-CTTCEEEEEEECTTSTTHHHHHHHHHHHHHHC-TTSEEEEEEHH---HHCCTTSSCTTT-CS
T ss_pred EEEeCCHHHHHHHHHHh-cCCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCCEEEEEeCC---cHHHHHHCCCCC-CC
Confidence 4445 678888877531 236677777754433332222 122244 45999999886 266889999997 99
Q ss_pred eEEEEeCCCCC--CCceee--cCCCChhHHHhHHhcCCC
Q psy16770 315 SLLIFKEDKDR--PSASIT--MNSIPVPTLQDITDNNPY 349 (554)
Q Consensus 315 tlvvfk~~~~~--~~~~i~--~~~~~~~~l~~fi~~~~~ 349 (554)
|+++|+++... ...... ...+....|..||..+..
T Consensus 188 Tll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 188 TLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp EEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred EEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 99999864321 111111 123567789999998754
No 422
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=92.31 E-value=0.12 Score=42.75 Aligned_cols=53 Identities=25% Similarity=0.295 Sum_probs=36.5
Q ss_pred ccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHH----HHHhCCcCCCCcceeccCCeEEEEeCCc
Q psy16770 157 DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGL----ARRLGVGSQLPQIALLTDGRTSFFKEPS 222 (554)
Q Consensus 157 ~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l----~~~~~v~~~~Pti~~~~~g~~~~y~~g~ 222 (554)
|||++|++....+.+ .|+.+..+|.+.++.+ .+..|... +|.+ |.+|+ +.||.
T Consensus 31 p~Cp~C~~ak~~L~~-------~gi~~~~~dI~~~~~~~~~l~~~~g~~t-vP~i--fi~g~---~iGG~ 87 (109)
T 3ipz_A 31 PMCGFSNTVVQILKN-------LNVPFEDVNILENEMLRQGLKEYSNWPT-FPQL--YIGGE---FFGGC 87 (109)
T ss_dssp BSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHHHHTCSS-SCEE--EETTE---EEECH
T ss_pred CCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHHCCCC-CCeE--EECCE---EEeCH
Confidence 599999987766654 2577888888776544 34457776 9965 45775 44664
No 423
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=91.87 E-value=0.6 Score=41.35 Aligned_cols=99 Identities=11% Similarity=0.069 Sum_probs=60.1
Q ss_pred cCCcccHHHHHhhhhcCCceEEEEEecCCchhHHHH-------HH-hhccCCceEEEEEEccCCCChhH-----------
Q psy16770 243 PLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-------IN-AFKHRTTIVFGVIVYDQEDSSSV----------- 303 (554)
Q Consensus 243 ~~t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~-------~~-a~~~~~~v~Fg~v~~~~~~~~~l----------- 303 (554)
..+..++++.+......++++++.|...--++.+.. .. ...+.+++.|..++++. +.++
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDN--KTPLTEPVKIMENGT 107 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTC--CCEEEEEEEEEETTE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCc--ccccchhhhhhhcch
Confidence 345567777665333457888887755444444332 11 11233468888888763 3333
Q ss_pred ---------------HhHhCCCCCCceEEEEeCCCCCCCceeecCCCC-hhHHHhHHhc
Q psy16770 304 ---------------FQRFKVPGDKDSLLIFKEDKDRPSASITMNSIP-VPTLQDITDN 346 (554)
Q Consensus 304 ---------------~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~-~~~l~~fi~~ 346 (554)
+++|+|.+ .||++++.+++... ....|..+ .+.+.++|+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~-~Pt~~lid~~G~~~--~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANA-QPFYVLIDNEGNPL--NKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCC-SSEEEEECTTSCBS--SCCBCSCCCHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCC-cceEEEECCCCCEE--eeccCCCCCHHHHHHHHHH
Confidence 78999997 99999996544422 22346666 7777777753
No 424
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=91.60 E-value=0.39 Score=40.15 Aligned_cols=82 Identities=6% Similarity=-0.057 Sum_probs=54.4
Q ss_pred ceEEEEEecCCchhHHHHHHhh--ccCCc-----eEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecC
Q psy16770 261 KVHALLFQRSLPVRLRYLINAF--KHRTT-----IVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMN 333 (554)
Q Consensus 261 ~~~v~~f~~~~~~~~~~~~~a~--~~~~~-----v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~ 333 (554)
...+|.|...--+..+.+.... .+... +.+..++.+.....+++.+|+|.+ .||+++|+++.+ . ....|
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g-~PT~i~f~~G~e-v--~Ri~G 94 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTF-TPTFVLMAGDVE-S--GRLEG 94 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCS-SSEEEEEETTEE-E--EEEEC
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCC-CCEEEEEECCEE-E--eeecC
Confidence 4556666555555555443322 23333 678888887554568999999997 999999995433 2 23467
Q ss_pred CCChhHHHhHHhc
Q psy16770 334 SIPVPTLQDITDN 346 (554)
Q Consensus 334 ~~~~~~l~~fi~~ 346 (554)
-++.+.+..|++.
T Consensus 95 ~~~~~~f~~~L~~ 107 (116)
T 3dml_A 95 YPGEDFFWPMLAR 107 (116)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 7888888888764
No 425
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=91.55 E-value=0.25 Score=41.61 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=36.1
Q ss_pred ccccccccchHHHHHHHHHhCCCCEE---EEEEEecCcHHH----HHHhCCcCCCCcceeccCCeEEEEeCCc
Q psy16770 157 DWCFACLQVEPIFKKLMDELSPLGVG---FFTVHVHNEQGL----ARRLGVGSQLPQIALLTDGRTSFFKEPS 222 (554)
Q Consensus 157 ~wC~~C~~l~p~~~~~a~~l~~~~v~---~~~Vd~~~~~~l----~~~~~v~~~~Pti~~~~~g~~~~y~~g~ 222 (554)
|||++|++....+.+. |+. +..+|...++.+ .+..|... +|.+ |.+|+ +.||.
T Consensus 29 p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~t-vP~v--fI~g~---~iGG~ 88 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ-------GVDPAKFAAYNVLEDPELREGIKEFSEWPT-IPQL--YVNKE---FIGGC 88 (121)
T ss_dssp BCTTHHHHHHHHHHHH-------TBCGGGEEEEECTTCHHHHHHHHHHHTCCS-SCEE--EETTE---EEESH
T ss_pred CCCccHHHHHHHHHHc-------CCCcceEEEEEecCCHHHHHHHHHHhCCCC-CCeE--EECCE---EEecH
Confidence 5999999887776653 455 778888876554 34446675 8876 45775 44664
No 426
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=90.43 E-value=0.23 Score=45.12 Aligned_cols=55 Identities=7% Similarity=0.222 Sum_probs=41.3
Q ss_pred CCcEEEEEE-cccccccc-cchHHHHHHHHHh-CCCCEE-EEEEEecC---cHHHHHHhCCc
Q psy16770 147 TTPHLILFY-SDWCFACL-QVEPIFKKLMDEL-SPLGVG-FFTVHVHN---EQGLARRLGVG 201 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~-~l~p~~~~~a~~l-~~~~v~-~~~Vd~~~---~~~l~~~~~v~ 201 (554)
++++++.|| ..||+.|. .-.+.|.+.+.++ +..|+. +..|.++. +...|+++++.
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~ 104 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIK 104 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCC
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCC
Confidence 345555555 57999999 8899999999999 877774 77777776 45667777664
No 427
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=90.40 E-value=0.25 Score=44.74 Aligned_cols=43 Identities=19% Similarity=0.314 Sum_probs=34.6
Q ss_pred CCCcEEEEEEcccccccccchHHH-HHHHHHhCCCCEEEEEEEec
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIF-KKLMDELSPLGVGFFTVHVH 189 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~-~~~a~~l~~~~v~~~~Vd~~ 189 (554)
..++.+|+|++.+|++|..+.+.+ .++.+.+.. .+.+..+...
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEecC
Confidence 356789999999999999999999 888888764 3677666644
No 428
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=89.96 E-value=1.4 Score=36.93 Aligned_cols=44 Identities=7% Similarity=0.273 Sum_probs=32.4
Q ss_pred CChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHh
Q psy16770 299 DSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 345 (554)
Q Consensus 299 ~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~ 345 (554)
.+..++++|++.. .|+++++.++..- .....+..+.+.|.++|+
T Consensus 102 ~~~~~~~~~~v~~-~P~~~lid~~G~i--~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 102 SKGELMKEYHIIT-IPTSFLLNEKGEI--EKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp SSSHHHHHTTCCE-ESEEEEECTTCCE--EEEEESCCCHHHHHHHHC
T ss_pred CchhHHHhcCcCc-cCeEEEEcCCCcE--EEEEcCCcCHHHHHHhhC
Confidence 3568999999997 9999999654432 234567778888887763
No 429
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=89.95 E-value=0.24 Score=41.59 Aligned_cols=53 Identities=21% Similarity=0.298 Sum_probs=35.7
Q ss_pred ccccccccchHHHHHHHHHhCCCCEE-EEEEEecCcHHHHH----HhCCcCCCCcceeccCCeEEEEeCCc
Q psy16770 157 DWCFACLQVEPIFKKLMDELSPLGVG-FFTVHVHNEQGLAR----RLGVGSQLPQIALLTDGRTSFFKEPS 222 (554)
Q Consensus 157 ~wC~~C~~l~p~~~~~a~~l~~~~v~-~~~Vd~~~~~~l~~----~~~v~~~~Pti~~~~~g~~~~y~~g~ 222 (554)
|||++|++....+++ .++. +..+|.+.++++.+ ..|... +|.+ |.+|+ +.||.
T Consensus 33 p~Cp~C~~ak~lL~~-------~gv~~~~~vdV~~d~~~~~~l~~~tg~~t-vP~v--fI~g~---~IGG~ 90 (118)
T 2wem_A 33 PQCGFSNAVVQILRL-------HGVRDYAAYNVLDDPELRQGIKDYSNWPT-IPQV--YLNGE---FVGGC 90 (118)
T ss_dssp BSSHHHHHHHHHHHH-------TTCCCCEEEESSSCHHHHHHHHHHHTCCS-SCEE--EETTE---EEESH
T ss_pred CccHHHHHHHHHHHH-------cCCCCCEEEEcCCCHHHHHHHHHHhCCCC-cCeE--EECCE---EEeCh
Confidence 599999987766653 3574 88888887665433 347775 8886 45775 44564
No 430
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=89.94 E-value=1.9 Score=36.79 Aligned_cols=92 Identities=12% Similarity=0.116 Sum_probs=59.6
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccch-----------------------HHHHhhCCCC
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQP-----------------------EFVNALTSPE 424 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~-----------------------~~~~~~~~~~ 424 (554)
+..+|.|. .....+......|.+++++ +.+..+.|+.|+.+... ++.+.+
T Consensus 31 k~~lv~f~~~~C~~C~~~~~~l~~l~~~--~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---- 104 (152)
T 2lja_A 31 KYIYIDVWATWCGPCRGELPALKELEEK--YAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAY---- 104 (152)
T ss_dssp SEEEEEECCSSCCGGGGTHHHHHHHHHH--STTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHT----
T ss_pred CEEEEEEECCcCHhHHHHhHHHHHHHHH--hccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHc----
Confidence 44555554 4556677788899999988 87667999999887644 233333
Q ss_pred CCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 425 DSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 425 ~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
. ...+|.++..++++ ..+. ..| ..+.+.|.++|++++.+..+
T Consensus 105 ---~-v~~~P~~~lid~~G~i~~~-~~g---------~~~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 105 ---L-INGIPRFILLDRDGKIISA-NMT---------RPSDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp ---T-CCSSCCEEEECTTSCEEES-SCC---------CTTCHHHHHHHHHHHTCCSS
T ss_pred ---C-cCCCCEEEEECCCCeEEEc-cCC---------CCCHHHHHHHHHHHhccccc
Confidence 0 12456555556555 3442 223 24678999999999988875
No 431
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=89.53 E-value=0.86 Score=34.54 Aligned_cols=79 Identities=13% Similarity=0.190 Sum_probs=52.9
Q ss_pred EEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCCCccccceEEEEEEecCCCeeEEEec
Q psy16770 372 VVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLL 450 (554)
Q Consensus 372 vvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ky~~~~ 450 (554)
++.|. +..+.+....+.+.+++++ +.+ .+.|..+|.++.+++++.+ . ...+|.+.. +.+ .++ .
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~--~~~-~~~~~~vd~~~~~~~~~~~-------~-v~~~Pt~~~-~G~-~~~---~ 68 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKE--FGD-KIDVEKIDIMVDREKAIEY-------G-LMAVPAIAI-NGV-VRF---V 68 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHH--HCS-SCCEEEECTTTCGGGGGGT-------C-SSCSSEEEE-TTT-EEE---E
T ss_pred EEEEECCCCcchHHHHHHHHHHHHH--hcC-CeEEEEEECCCCHHHHHhC-------C-ceeeCEEEE-CCE-EEE---c
Confidence 34444 5556778888899999988 753 5999999999888877766 1 135565544 222 223 3
Q ss_pred CCCCCcccccchhhHHHHHHHHhhh
Q psy16770 451 GDAVDDWKDYNTTKDRLDAGLRSLV 475 (554)
Q Consensus 451 ~~~~~~~~~~~~t~e~l~~fl~~~~ 475 (554)
|. .+.+.|.++|++.+
T Consensus 69 G~---------~~~~~l~~~l~~~l 84 (85)
T 1nho_A 69 GA---------PSREELFEAINDEM 84 (85)
T ss_dssp CS---------SCCHHHHHHHHHHC
T ss_pred cC---------CCHHHHHHHHHHHh
Confidence 31 25578999988775
No 432
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=88.58 E-value=2.9 Score=35.46 Aligned_cols=102 Identities=7% Similarity=0.036 Sum_probs=56.9
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCC------------Ccc--ccceE
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPED------------SSE--ISLHI 433 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~------------~~~--~~~~~ 433 (554)
+..+|.|. .....+......|.+++++ ++...+.++.|+.+...+-...+....+ ... ....+
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~l~~~--~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 29 SVVYLDFWASWCGPCRQSFPWMNQMQAK--YKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp SEEEEEEECTTCTHHHHHHHHHHHHHHH--HGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHH--hhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 44555444 4556677778888999888 8765689999988754422221100000 000 01245
Q ss_pred EEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 434 AAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 434 ~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
|.++..+.++ ..+... |. ...+.+.|.++|++.+.+...
T Consensus 107 P~~~lid~~G~i~~~~~-g~-------~~~~~~~l~~~i~~~~~~~~~ 146 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHV-GF-------RPADKEALEQQILAALGGNEG 146 (152)
T ss_dssp SEEEEECTTSBEEEEEE-SC-------CTTTHHHHHHHHHHHTC----
T ss_pred CeEEEECCCCCEEEEEc-cC-------CCcCHHHHHHHHHHHHccccc
Confidence 6555555555 455433 31 124678999999999988775
No 433
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=88.53 E-value=3.1 Score=35.55 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=56.3
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccc-------------------------hHHHHhhCC
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQ-------------------------PEFVNALTS 422 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q-------------------------~~~~~~~~~ 422 (554)
+..+|.|. .....+......|.+++++ +.++.+.|+.|+.+.. .++++.|
T Consensus 30 k~vll~F~a~~C~~C~~~~~~l~~l~~~--~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-- 105 (152)
T 2lrn_A 30 KYVLVDFWFAGCSWCRKETPYLLKTYNA--FKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESY-- 105 (152)
T ss_dssp SEEEEEEECTTCTTHHHHHHHHHHHHHH--HTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHT--
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHH--hccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHh--
Confidence 44445444 4556677778889999888 8766699999988752 3444444
Q ss_pred CCCCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 423 PEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 423 ~~~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
. ...+|.++..+.++ ..+..+. .+.|.++|++++++...
T Consensus 106 -----~-v~~~P~~~lid~~G~i~~~~~~-------------~~~l~~~l~~l~~~~~~ 145 (152)
T 2lrn_A 106 -----C-IVGFPHIILVDPEGKIVAKELR-------------GDDLYNTVEKFVNGAKE 145 (152)
T ss_dssp -----T-CCSSCEEEEECTTSEEEEECCC-------------TTHHHHHHHHHHTSSSS
T ss_pred -----C-CCcCCeEEEECCCCeEEEeeCC-------------HHHHHHHHHHHHhhccc
Confidence 1 12456555555555 4454332 26788899988887664
No 434
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=88.45 E-value=0.41 Score=52.85 Aligned_cols=53 Identities=13% Similarity=0.087 Sum_probs=41.8
Q ss_pred HhhccCCCCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHH
Q psy16770 11 LFINCAVSLDPYETLGVPRTASL--QEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNI 70 (554)
Q Consensus 11 ~~~~~~~~~d~y~~Lgv~~~a~~--~~ik~ay~~l~~~~hPd~~~~~~~~~~~~~i~~Ay~~ 70 (554)
+-...+...|+|++||++.+... .+|++|||+||+..+++ .+++..+..|+.|
T Consensus 621 l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 621 LDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp HHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred HHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 44445667779999999777765 67999999999976655 4789999988876
No 435
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=87.83 E-value=2.5 Score=35.94 Aligned_cols=93 Identities=8% Similarity=0.048 Sum_probs=56.6
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccch----------------------HHHHhhCCCCC
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQP----------------------EFVNALTSPED 425 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~----------------------~~~~~~~~~~~ 425 (554)
+..+|.|. .....+......|.+++++ +....+.|+.|+.+... ++...+
T Consensus 27 k~vlv~F~~~~C~~C~~~~~~l~~~~~~--~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----- 99 (151)
T 2f9s_A 27 KGVFLNFWGTWCEPCKKEFPYMANQYKH--FKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAY----- 99 (151)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH--HGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHT-----
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHH--hccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhc-----
Confidence 44555554 4445566677788888888 76556899999886532 333333
Q ss_pred CccccceEEEEEEecCCCeeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 426 SSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 426 ~~~~~~~~~~v~~~~~~~~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
. ...+|.++..+.++..-....|. .+.+.|.++|++++.+...
T Consensus 100 --~-v~~~P~~~lid~~G~i~~~~~G~---------~~~~~l~~~l~~ll~~~~~ 142 (151)
T 2f9s_A 100 --D-VSPLPTTFLINPEGKVVKVVTGT---------MTESMIHDYMNLIKPGETS 142 (151)
T ss_dssp --T-CCSSCEEEEECTTSEEEEEEESC---------CCHHHHHHHHHHHSCC---
T ss_pred --C-CCCCCeEEEECCCCcEEEEEeCC---------CCHHHHHHHHHHHHhhhhc
Confidence 1 13556655556666332233342 3678999999999988775
No 436
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=87.53 E-value=2.9 Score=35.14 Aligned_cols=89 Identities=11% Similarity=0.245 Sum_probs=54.4
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEeccc---------------------------chHHHHhh
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEK---------------------------QPEFVNAL 420 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~---------------------------q~~~~~~~ 420 (554)
+..+|.|. .....+......|.+++++ +.++ +.|+.|+.+. ..++++.+
T Consensus 30 k~~lv~f~~~~C~~C~~~~~~l~~l~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (148)
T 2b5x_A 30 KPTLIHFWSISCHLCKEAMPQVNEFRDK--YQDQ-LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (148)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHH--HTTT-SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CEEEEEEEcCCCHHHHHHhHHHHHHHHH--hcCC-cEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence 33444444 4555667777788888888 8665 8999988532 33444444
Q ss_pred CCCCCCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCC
Q psy16770 421 TSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDP 478 (554)
Q Consensus 421 ~~~~~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~ 478 (554)
. ...+|.++..+.++ ..+ ...|. .+.+.|.++|+++++..
T Consensus 107 -------~-v~~~P~~~lid~~G~i~~-~~~g~---------~~~~~l~~~l~~~l~~~ 147 (148)
T 2b5x_A 107 -------E-NEYVPAYYVFDKTGQLRH-FQAGG---------SGMKMLEKRVNRVLAET 147 (148)
T ss_dssp -------C-CCCSSEEEEECTTCBEEE-EEESC---------STTHHHHHHHHHHHTTC
T ss_pred -------C-CCCCCEEEEECCCCcEEE-EecCC---------CCHHHHHHHHHHHHhcc
Confidence 1 12456555555555 334 23342 35688999999988753
No 437
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=87.52 E-value=3.2 Score=34.17 Aligned_cols=82 Identities=12% Similarity=0.093 Sum_probs=50.6
Q ss_pred CceEEEEEecCCchhHHHHHH----hh-ccCCceEEEEEEccC---------------------CCChhHHhHhCCCCCC
Q psy16770 260 NKVHALLFQRSLPVRLRYLIN----AF-KHRTTIVFGVIVYDQ---------------------EDSSSVFQRFKVPGDK 313 (554)
Q Consensus 260 ~~~~v~~f~~~~~~~~~~~~~----a~-~~~~~v~Fg~v~~~~---------------------~~~~~l~~k~~i~~~~ 313 (554)
+++.++.|....-+....... .. ++. ++.|..++++. ..+..++++|++.+ .
T Consensus 25 ~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~-~ 102 (136)
T 1zzo_A 25 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ-Q 102 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS-S
T ss_pred CCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC-C
Confidence 456666664433333222211 11 333 78888887643 23567899999997 9
Q ss_pred ceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 314 DSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 314 Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
|+++++.++..- . ...+..+...|.++|+.
T Consensus 103 P~~~~id~~g~i--~-~~~g~~~~~~l~~~l~~ 132 (136)
T 1zzo_A 103 PAYAFVDPHGNV--D-VVRGRMSQDELTRRVTA 132 (136)
T ss_dssp SEEEEECTTCCE--E-EEESCCCHHHHHHHHHH
T ss_pred ceEEEECCCCCE--E-EEecCCCHHHHHHHHHH
Confidence 999999754431 1 35666778888887764
No 438
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=87.13 E-value=0.47 Score=42.59 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=42.5
Q ss_pred CCcEEEEEE-cccccccccchHHHHHHHHHhCCCCEE-EEEEEecC---cHHHHHHhCCc
Q psy16770 147 TTPHLILFY-SDWCFACLQVEPIFKKLMDELSPLGVG-FFTVHVHN---EQGLARRLGVG 201 (554)
Q Consensus 147 ~~~~lV~Fy-a~wC~~C~~l~p~~~~~a~~l~~~~v~-~~~Vd~~~---~~~l~~~~~v~ 201 (554)
++++++.|| ..||+-|..-.+.|.+.+.+++..|+. +..|.++. ..+.|+++++.
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~~ 101 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPE 101 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCTT
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 345566566 469999999999999999999866785 87787776 45678888763
No 439
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=86.40 E-value=0.14 Score=43.13 Aligned_cols=62 Identities=13% Similarity=0.242 Sum_probs=39.9
Q ss_pred cCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCC-ceeecCCCChhHHHhHHhc
Q psy16770 284 HRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPS-ASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 284 ~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~-~~i~~~~~~~~~l~~fi~~ 346 (554)
+.+++.|..++++...+.+++++|+|.+ .|++++|.+...+.. .....|..+.+.|.++|+.
T Consensus 51 ~~~~~~~~~vd~~~~~~~~~~~~~~v~~-~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~ 113 (130)
T 2lst_A 51 LEARFVVASVSVDTPEGQELARRYRVPG-TPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQ 113 (130)
Confidence 3456788888875445678999999997 999999953211110 1123455566666666653
No 440
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=85.49 E-value=2.8 Score=36.25 Aligned_cols=83 Identities=12% Similarity=0.135 Sum_probs=49.5
Q ss_pred CCceEEEEEe-cCCchhHHHHHHh------h--ccCCceEEEEEEccCCC---------ChhHHhHhCCCCCCceEEEEe
Q psy16770 259 DNKVHALLFQ-RSLPVRLRYLINA------F--KHRTTIVFGVIVYDQED---------SSSVFQRFKVPGDKDSLLIFK 320 (554)
Q Consensus 259 ~~~~~v~~f~-~~~~~~~~~~~~a------~--~~~~~v~Fg~v~~~~~~---------~~~l~~k~~i~~~~Ptlvvfk 320 (554)
.++++++.|. ..--+..+..... + .....+.+..++++... +.+++++|+|.+ .|+++++.
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~-~Pt~~~~d 124 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG-FPELVFID 124 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS-SSEEEEEC
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCC-CCEEEEEc
Confidence 4677777775 4433333322211 1 12356788888776321 247899999997 99999995
Q ss_pred CCCCCCCceeecCCC--ChhHHHhHHh
Q psy16770 321 EDKDRPSASITMNSI--PVPTLQDITD 345 (554)
Q Consensus 321 ~~~~~~~~~i~~~~~--~~~~l~~fi~ 345 (554)
+++... ... |.. +...+.++|+
T Consensus 125 ~~G~~~--~~~-G~~~~~~~~l~~~l~ 148 (154)
T 2ju5_A 125 AEGKQL--ARM-GFEPGGGAAYVSKVK 148 (154)
T ss_dssp TTCCEE--EEE-CCCTTCHHHHHHHHH
T ss_pred CCCCEE--EEe-cCCCCCHHHHHHHHH
Confidence 544322 223 555 5666777665
No 441
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=85.47 E-value=4.5 Score=34.38 Aligned_cols=100 Identities=4% Similarity=-0.026 Sum_probs=57.4
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHH---HhhCCCC------C---------Cccc
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFV---NALTSPE------D---------SSEI 429 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~---~~~~~~~------~---------~~~~ 429 (554)
+..+|.|. .....+......|.+++++ ++.+.+.|+.|+.+...++. +.+-... + ....
T Consensus 25 k~vlv~F~a~wC~~C~~~~~~l~~l~~~--~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 25 PVRIVNLWATWCGPCRKEMPAMSKWYKA--QKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHT--SCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHH--hccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 45555554 4455667778889999888 87777999999886433322 1110000 0 0000
Q ss_pred cceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 430 SLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 430 ~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
...+|.++..+.++ ..+. ..| ..+.+.|.++|+++.++...
T Consensus 103 v~~~P~~~lid~~G~i~~~-~~g---------~~~~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQT-ITG---------EVNEKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp SCCSSEEEEEETTTTEEEE-CCS---------CCCHHHHHHHHHHHHTC---
T ss_pred cCCCCEEEEECCCCcEEEE-ECC---------CCCHHHHHHHHHHHHHHhhc
Confidence 12456555555555 4453 334 24678999999999998875
No 442
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=85.28 E-value=5.1 Score=34.41 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=58.7
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHhhCCCCCC--c----------------c-
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDS--S----------------E- 428 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~~~~~~~~--~----------------~- 428 (554)
+..||.|. .....+......|.+++++ ++...+.|+.|+.+...+.+..+....+. . +
T Consensus 35 k~vlv~f~~~~C~~C~~~~~~l~~l~~~--~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 35 KAYIVNFFATWCPPCRSEIPDMVQVQKT--WASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHH--HTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHH--hccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 44455444 4555667778888899888 87666999999987655544444110000 0 0
Q ss_pred ccceEEEEEEecCCCeeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 429 ISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 429 ~~~~~~~v~~~~~~~~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
....+|.++..+.++..-....|. .+.+.+.++|+++++....
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~---------~~~~~l~~~l~~~l~~~~~ 155 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGP---------RSKADFDRIVKMALGAKAA 155 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSC---------CCHHHHHHHHHHHHC----
T ss_pred CCCCCCeEEEECCCCcEEEEEcCC---------CCHHHHHHHHHHHHhhhcc
Confidence 013566655556666332233442 3678999999999875543
No 443
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=85.05 E-value=3.8 Score=35.77 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=57.3
Q ss_pred CcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhh--------ccCCceEEEEEEccCCCChhHHhHhCCCCCCceE
Q psy16770 245 SATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF--------KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSL 316 (554)
Q Consensus 245 t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~--------~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptl 316 (554)
...++++-++.....+++++|.|....-...+.+.... .+++++.+-.++.+......+.++|++.+ +|++
T Consensus 27 ~~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~-~P~~ 105 (153)
T 2dlx_A 27 HKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGD-FPYV 105 (153)
T ss_dssp CCSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCS-SSEE
T ss_pred cccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCC-CCEE
Confidence 34567766654445689999988765444443332111 12345666666665433456889999997 9999
Q ss_pred EEEeCC-CCCCCceeecCCCChhHHHhHH
Q psy16770 317 LIFKED-KDRPSASITMNSIPVPTLQDIT 344 (554)
Q Consensus 317 vvfk~~-~~~~~~~i~~~~~~~~~l~~fi 344 (554)
+++.+. .+.. ..+ .+ ++...+.++|
T Consensus 106 ~fld~~~G~~l-~~~-~g-~~~~~fl~~L 131 (153)
T 2dlx_A 106 SILDPRTGQKL-VEW-HQ-LDVSSFLDQV 131 (153)
T ss_dssp EEECTTTCCCC-EEE-SS-CCHHHHHHHH
T ss_pred EEEeCCCCcEe-eec-CC-CCHHHHHHHH
Confidence 999775 3333 222 33 6666544433
No 444
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=85.05 E-value=1.9 Score=35.24 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=47.7
Q ss_pred eEEEEEecCCchhHHHHHHhhc---cCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChh
Q psy16770 262 VHALLFQRSLPVRLRYLINAFK---HRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVP 338 (554)
Q Consensus 262 ~~v~~f~~~~~~~~~~~~~a~~---~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~ 338 (554)
..+++|....-+........+. -...+.|..++.+ .+++++++|++. .|+|++|.++.. +..+.++.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~i~~~~vDId--~d~~l~~~ygv~--VP~l~~~~dG~~-----v~~g~~~~~ 100 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSWFELEVINID--GNEHLTRLYNDR--VPVLFAVNEDKE-----LCHYFLDSD 100 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSCCCCEEEETT--TCHHHHHHSTTS--CSEEEETTTTEE-----EECSSCCCH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcCCeEEEEECC--CCHHHHHHhCCC--CceEEEEECCEE-----EEecCCCHH
Confidence 4466665544443333322221 1123888899887 688999999985 899999976432 334667888
Q ss_pred HHHhHH
Q psy16770 339 TLQDIT 344 (554)
Q Consensus 339 ~l~~fi 344 (554)
.|.+||
T Consensus 101 ~L~~~L 106 (107)
T 2fgx_A 101 VIGAYL 106 (107)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888876
No 445
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=84.89 E-value=5.5 Score=33.76 Aligned_cols=94 Identities=12% Similarity=0.114 Sum_probs=54.6
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccc-hH----------------------HHHhhCCCC
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQ-PE----------------------FVNALTSPE 424 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q-~~----------------------~~~~~~~~~ 424 (554)
+..+|.|. .....+......|.+++++ +.+..+.|+.|+.+.. .+ +...|
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~~~~~--~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---- 102 (154)
T 3kcm_A 29 QVVIVNFWATWCPPCREEIPSMMRLNAA--MAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLY---- 102 (154)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH--TTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHH----
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHH--hccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHh----
Confidence 44555454 4455666777788899888 8776789999888754 22 33333
Q ss_pred CCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 425 DSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 425 ~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
. ...+|.++..+.++ ..+.. .|. ...+.+.+.++|+++......
T Consensus 103 ---~-v~~~P~~~lid~~G~i~~~~-~g~-------~~~~~~~l~~~l~~l~~~~~~ 147 (154)
T 3kcm_A 103 ---G-TTGVPETFVIDRHGVILKKV-VGA-------MEWDHPEVIAFLNNELSKARE 147 (154)
T ss_dssp ---T-CCSBCEEEEECTTSBEEEEE-ESC-------CCTTSHHHHHHHHTC------
T ss_pred ---C-CCCCCeEEEECCCCcEEEEE-cCC-------CccccHHHHHHHHHHHHHhhh
Confidence 1 13566455556565 44533 332 124668999999998877664
No 446
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=84.68 E-value=5.6 Score=33.66 Aligned_cols=92 Identities=12% Similarity=0.120 Sum_probs=56.1
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecc-----------------------cchHHHHhhCCCC
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIE-----------------------KQPEFVNALTSPE 424 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~-----------------------~q~~~~~~~~~~~ 424 (554)
+..+|.|. .....+......|.+++++ +....+.++.|+.+ ...++++.|
T Consensus 29 k~~lv~f~~~~C~~C~~~~~~l~~l~~~--~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---- 102 (153)
T 2l5o_A 29 KVTLINFWFPSCPGCVSEMPKIIKTAND--YKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAF---- 102 (153)
T ss_dssp CEEEEEEECTTCTTHHHHHHHHHHHHHH--GGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHH----
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHH--hccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHc----
Confidence 34444444 5556677778888888888 76656888777632 233444444
Q ss_pred CCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 425 DSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 425 ~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
. ...+|.++..+.++ ..+. +.|. .+.+.|.++|++++++...
T Consensus 103 ---~-i~~~P~~~lid~~G~i~~~-~~g~---------~~~~~l~~~l~~ll~~~~~ 145 (153)
T 2l5o_A 103 ---G-TQVYPTSVLIGKKGEILKT-YVGE---------PDFGKLYQEIDTAWRNSDA 145 (153)
T ss_dssp ---T-CCSSSEEEEECSSSCCCEE-EESS---------CCHHHHHHHHHHHHHCCSS
T ss_pred ---C-CCccCeEEEECCCCcEEEE-EcCC---------CCHHHHHHHHHHHHHhhhh
Confidence 1 12455555555555 3332 3342 3678999999999888765
No 447
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=83.98 E-value=4.7 Score=33.20 Aligned_cols=85 Identities=14% Similarity=0.100 Sum_probs=51.4
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEeccc----------------------chHHHHhhCCCCC
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEK----------------------QPEFVNALTSPED 425 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~----------------------q~~~~~~~~~~~~ 425 (554)
+..+|.|. .....+......+.+++++ +. .+.|+.|+.+. ..++.+.+
T Consensus 25 k~~lv~f~~~~C~~C~~~~~~l~~~~~~--~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----- 95 (136)
T 1lu4_A 25 KPAVLWFWTPWCPFCNAEAPSLSQVAAA--NP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARY----- 95 (136)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHH--CT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHT-----
T ss_pred CEEEEEEECCcChhHHHHHHHHHHHHHH--CC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhc-----
Confidence 34444444 4555667777888888888 75 58999998866 33444444
Q ss_pred CccccceEEEEEEecCCCeeEEEec---CCCCCcccccchhhHHHHHHHHhhh
Q psy16770 426 SSEISLHIAAMWRMDYKKIKYGWLL---GDAVDDWKDYNTTKDRLDAGLRSLV 475 (554)
Q Consensus 426 ~~~~~~~~~~v~~~~~~~~ky~~~~---~~~~~~~~~~~~t~e~l~~fl~~~~ 475 (554)
. ...+|.++..+.++..- ... | ..+.+.|.++|++++
T Consensus 96 --~-i~~~P~~~lid~~G~i~-~~~~~~g---------~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 96 --N-VPWQPAFVFYRADGTST-FVNNPTA---------AMSQDELSGRVAALT 135 (136)
T ss_dssp --T-CCSSSEEEEECTTSCEE-EECCSSS---------CCCHHHHHHHHHHC-
T ss_pred --C-CCCCCEEEEECCCCcEE-EEEcCCC---------ccCHHHHHHHHHHHh
Confidence 1 13456555555555322 233 3 246788999998875
No 448
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=83.43 E-value=1.1 Score=42.10 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=37.5
Q ss_pred cccCCCCCCcEEEEEEcccccccccchHH-HHHHHHHhC-CCCEEEEEEEecC
Q psy16770 140 NYIPKSYTTPHLILFYSDWCFACLQVEPI-FKKLMDELS-PLGVGFFTVHVHN 190 (554)
Q Consensus 140 ~v~~~~~~~~~lV~Fya~wC~~C~~l~p~-~~~~a~~l~-~~~v~~~~Vd~~~ 190 (554)
.+.+....++.+++|....|++|+++.|. +.++.+.+- ..++++...+..-
T Consensus 32 ~~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~ 84 (226)
T 3f4s_A 32 KLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPL 84 (226)
T ss_dssp CEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCC
T ss_pred CccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCC
Confidence 34444456678999999999999999986 467777772 2248888777654
No 449
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=81.94 E-value=14 Score=29.13 Aligned_cols=79 Identities=9% Similarity=0.069 Sum_probs=52.3
Q ss_pred CceEEEEEecCCchhHHHHHHhh-ccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChh
Q psy16770 260 NKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVP 338 (554)
Q Consensus 260 ~~~~v~~f~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~ 338 (554)
+.+.+++|....-+........+ +....+.|..++.+...+++++++|+ .. .|+++ .++.. +..+.++..
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~i~~~~vdi~~~~~~el~~~~g-~~-vP~l~--~~g~~-----~~~~g~~~~ 85 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYK-FD-IPVFH--LNGQF-----LMMHRVNTS 85 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSS-SS-CSEEE--ESSSE-----EEESSCCHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhCCeEEEEECCCcchHHHHHHHC-CC-CCEEE--ECCEE-----EEecCCCHH
Confidence 45667777665555555555444 33455999999987435688999999 75 99763 33221 234557888
Q ss_pred HHHhHHhcC
Q psy16770 339 TLQDITDNN 347 (554)
Q Consensus 339 ~l~~fi~~~ 347 (554)
.|.++|+..
T Consensus 86 ~l~~~l~~~ 94 (100)
T 1wjk_A 86 KLEKQLRKL 94 (100)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHHHH
Confidence 899998754
No 450
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=81.49 E-value=1.7 Score=39.83 Aligned_cols=46 Identities=7% Similarity=0.146 Sum_probs=36.4
Q ss_pred CcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 190 NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 190 ~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
.+...++++||.| +||++++.+|+......|..+.+.+.+.+.+.+
T Consensus 164 ~~~~~a~~~gv~g-~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 164 AGFQRVAQWGISG-FPALVVESGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHHTTCCS-SSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcc-cceEEEEECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 3567789999998 999999889986545566668888988887654
No 451
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=81.06 E-value=11 Score=30.64 Aligned_cols=45 Identities=4% Similarity=0.076 Sum_probs=32.8
Q ss_pred CChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhc
Q psy16770 299 DSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 346 (554)
Q Consensus 299 ~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~ 346 (554)
.+..++++|++.+ .|+++++.++..- .....+..+.+.|.++|+.
T Consensus 92 ~~~~~~~~~~v~~-~P~~~lid~~G~i--~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 92 PSGKLLETYGVRS-YPTQAFIDKEGKL--VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TTCHHHHHTTCCS-SSEEEEECTTCCE--EEEEESCCCHHHHHHHHHH
T ss_pred cchHHHHHcCccc-CCeEEEECCCCcE--EEeecCCCcHHHHHHHHHh
Confidence 3567999999997 9999999654432 2345677788888887764
No 452
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=80.98 E-value=9.3 Score=31.83 Aligned_cols=43 Identities=14% Similarity=0.282 Sum_probs=31.3
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccC-CCCceEEEEEecccc
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRF-VHNNIAFMYVFIEKQ 413 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~-~~~~v~F~~vd~~~q 413 (554)
+..+|.|. .....+......|.+++++ + .+..+.|+.|+.+..
T Consensus 34 k~vll~F~~~~C~~C~~~~~~l~~l~~~--~~~~~~~~~v~v~~d~~ 78 (148)
T 3fkf_A 34 RYLLLNFWASWCDPQPEANAELKRLNKE--YKKNKNFAMLGISLDID 78 (148)
T ss_dssp SEEEEEEECGGGCCCHHHHHHHHHHHHH--TTTCTTEEEEEEECCSC
T ss_pred cEEEEEEECCCCHHHHHHhHHHHHHHHH--hcCCCCeEEEEEECCCC
Confidence 44455444 4556788888999999998 8 665699999887653
No 453
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=80.68 E-value=5.2 Score=33.95 Aligned_cols=96 Identities=17% Similarity=0.056 Sum_probs=53.0
Q ss_pred eEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEec--ccchHHHHhhCCCCC---------------Cc--cc
Q psy16770 370 LCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFI--EKQPEFVNALTSPED---------------SS--EI 429 (554)
Q Consensus 370 lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~--~~q~~~~~~~~~~~~---------------~~--~~ 429 (554)
..+|.|. .....+......|.+++++ + .+.|+.|+. +...+-...+....+ .. -.
T Consensus 32 ~vll~f~~~~C~~C~~~~~~l~~l~~~--~---~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (154)
T 3ia1_A 32 PAVIVFWASWCTVCKAEFPGLHRVAEE--T---GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK 106 (154)
T ss_dssp SEEEEEECTTCHHHHHHHHHHHHHHHH--H---CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS
T ss_pred eEEEEEEcccChhHHHHHHHHHHHHHH--c---CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC
Confidence 3444443 4555667777788888888 7 477777777 222222222211000 00 00
Q ss_pred cceEEEEEEecCCCe-eEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 430 SLHIAAMWRMDYKKI-KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 430 ~~~~~~v~~~~~~~~-ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
...+|.++..+.++. .+. ..| ..+.+.|.++|++..++..+
T Consensus 107 v~~~P~~~lid~~G~i~~~-~~g---------~~~~~~l~~~l~~~~~~~~~ 148 (154)
T 3ia1_A 107 VLGQPWTFVVDREGKVVAL-FAG---------RAGREALLDALLLAGADLEG 148 (154)
T ss_dssp BCSSCEEEEECTTSEEEEE-EES---------BCCHHHHHHHHHHTTCCC--
T ss_pred CCcccEEEEECCCCCEEEE-EcC---------CCCHHHHHHHHHhccCcccc
Confidence 135666555566663 443 334 24778999999999988875
No 454
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=80.16 E-value=11 Score=32.21 Aligned_cols=60 Identities=10% Similarity=0.088 Sum_probs=37.9
Q ss_pred CceEEEEEEccC-----------------CCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCC--CChhHHHhHHhc
Q psy16770 286 TTIVFGVIVYDQ-----------------EDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNS--IPVPTLQDITDN 346 (554)
Q Consensus 286 ~~v~Fg~v~~~~-----------------~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~--~~~~~l~~fi~~ 346 (554)
..+.|..++.+. ..+..+++.|++.. .|+++++.++..-. ....|. .....+.+.+..
T Consensus 73 ~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-~P~~~lid~~G~i~--~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 73 GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR-LPDTFIVDRKGIIR--QRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS-SSEEEEECTTSBEE--EEEESCCCTTSHHHHHHHHT
T ss_pred CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC-cceEEEEcCCCCEE--EEEeCCCccchHHHHHHHHh
Confidence 567887777653 12568999999997 99988886544322 223333 344456666665
Q ss_pred CC
Q psy16770 347 NP 348 (554)
Q Consensus 347 ~~ 348 (554)
+.
T Consensus 150 ~~ 151 (158)
T 3hdc_A 150 LE 151 (158)
T ss_dssp TC
T ss_pred hc
Confidence 54
No 455
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=80.09 E-value=1.4 Score=39.84 Aligned_cols=43 Identities=9% Similarity=-0.023 Sum_probs=32.7
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV 188 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~ 188 (554)
..++++|+|....|++|+++.+...++.+++.+.++++.--+.
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEc
Confidence 3457788899999999999999888877766322488776664
No 456
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=80.04 E-value=1.6 Score=36.57 Aligned_cols=66 Identities=9% Similarity=0.169 Sum_probs=39.6
Q ss_pred EEEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHH----HHHh--------CCcCCCCcceeccCCeEEE
Q psy16770 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGL----ARRL--------GVGSQLPQIALLTDGRTSF 217 (554)
Q Consensus 150 ~lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l----~~~~--------~v~~~~Pti~~~~~g~~~~ 217 (554)
+++.|.+++|+.|+-... =..+-..|+..||.|-.+|.+.++.. .++. |... +|. +|.+|.
T Consensus 1 ~V~vYtt~~c~~c~~kk~-c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~t-vPQ--IFi~~~--- 73 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKK-QQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPL-PPQ--IFNESQ--- 73 (121)
T ss_dssp CEEEEECTTCSCHHHHHH-HHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCC-SCE--EEETTE---
T ss_pred CEEEEecCCCCCccchHH-HHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcC-CCE--EEECCE---
Confidence 356788999999941110 11233344455799999999877544 3455 4554 664 445664
Q ss_pred EeCCc
Q psy16770 218 FKEPS 222 (554)
Q Consensus 218 y~~g~ 222 (554)
+.||.
T Consensus 74 ~iGG~ 78 (121)
T 1u6t_A 74 YRGDY 78 (121)
T ss_dssp EEEEH
T ss_pred EEech
Confidence 45664
No 457
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=79.79 E-value=9.9 Score=33.48 Aligned_cols=102 Identities=10% Similarity=0.013 Sum_probs=56.9
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccc-----hHHHHhhCCC-CC-Cccc-----------
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQ-----PEFVNALTSP-ED-SSEI----------- 429 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q-----~~~~~~~~~~-~~-~~~~----------- 429 (554)
+..+|.|. .....+......|.++.++ +..+.+.++.|+.+.. .+|++.+-.. .. ..+.
T Consensus 61 k~vll~F~a~~C~~C~~~~~~l~~l~~~--~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 61 KTLLVNLWATWCVPCRKEMPALDELQGK--LSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH--HCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CEEEEEEEeCCCHhHHHHHHHHHHHHHH--hccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 34444444 4445556677788888888 7756788888887643 4455544110 00 0000
Q ss_pred --cceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 430 --SLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 430 --~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
...+|.++..+.++ ..+.. .|. .+.+.+.+.++|+++++++..
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~-~g~-------~~~~~~~l~~~l~~ll~~~a~ 184 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATI-AGP-------AEWASEDALKLIRAATGKAAA 184 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEE-ESC-------CCTTSHHHHHHHHHHHC----
T ss_pred cccCCCCEEEEECCCCCEEEEE-ecC-------CccCHHHHHHHHHHHhccccc
Confidence 01566655556665 44543 342 123568899999999987653
No 458
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=79.24 E-value=7.9 Score=32.31 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=32.4
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchH
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPE 415 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~ 415 (554)
+..+|.|. .....+......|.+++++ ++.+.+.|+.|+.+...+
T Consensus 32 k~vll~f~~~~C~~C~~~~~~l~~l~~~--~~~~~~~~v~v~~d~~~~ 77 (148)
T 3hcz_A 32 KYTILFFWDSQCGHCQQETPKLYDWWLK--NRAKGIQVYAANIERKDE 77 (148)
T ss_dssp SEEEEEEECGGGCTTCSHHHHHHHHHHH--HGGGTEEEEEEECCSSSH
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHH--hccCCEEEEEEEecCCHH
Confidence 44455444 4456677888899999988 876569999998875554
No 459
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=78.90 E-value=6.1 Score=35.25 Aligned_cols=87 Identities=10% Similarity=-0.045 Sum_probs=53.5
Q ss_pred HHHHhCCCCccccC-CcccHHHHHhhhhcCCceEEEEEecCCchhHHHHHH--------hhccCCceEEEEEEccCCCCh
Q psy16770 231 FFRLKLPYKLIVPL-SATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN--------AFKHRTTIVFGVIVYDQEDSS 301 (554)
Q Consensus 231 fl~~~~~~~~v~~~-t~~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~--------a~~~~~~v~Fg~v~~~~~~~~ 301 (554)
++.++...++.... .++.++... ..++++++.|...--.+.+.... +..+.+++.+..+|.+ ..+
T Consensus 13 yl~~ha~~~v~W~~~~~ea~~~A~----~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~d--e~~ 86 (173)
T 3ira_A 13 YLLQHAYNPVDWYPWGEEAFEKAR----KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDRE--ERP 86 (173)
T ss_dssp HHHTTTTSSSCCBCSSHHHHHHHH----HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETT--TCH
T ss_pred HHHhccCCCCCCCCcCHHHHHHHH----HhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCc--ccC
Confidence 56666655532222 344555544 35888888886544444333222 1123346777788776 678
Q ss_pred hHHhHh--------CCCCCCceEEEEeCCCC
Q psy16770 302 SVFQRF--------KVPGDKDSLLIFKEDKD 324 (554)
Q Consensus 302 ~l~~k~--------~i~~~~Ptlvvfk~~~~ 324 (554)
++.+.| ++.+ .|++++|+++..
T Consensus 87 ~l~~~y~~~~q~~~gv~g-~Pt~v~l~~dG~ 116 (173)
T 3ira_A 87 DIDNIYMTVCQIILGRGG-WPLNIIMTPGKK 116 (173)
T ss_dssp HHHHHHHHHHHHHHSCCC-SSEEEEECTTSC
T ss_pred cHHHHHHHHHHHHcCCCC-CcceeeECCCCC
Confidence 888888 8987 999999986544
No 460
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=78.72 E-value=1 Score=37.73 Aligned_cols=53 Identities=21% Similarity=0.304 Sum_probs=33.4
Q ss_pred ccccccccchHHHHHHHHHhCCCCE-EEEEEEecCcHHHHH----HhCCcCCCCcceeccCCeEEEEeCCc
Q psy16770 157 DWCFACLQVEPIFKKLMDELSPLGV-GFFTVHVHNEQGLAR----RLGVGSQLPQIALLTDGRTSFFKEPS 222 (554)
Q Consensus 157 ~wC~~C~~l~p~~~~~a~~l~~~~v-~~~~Vd~~~~~~l~~----~~~v~~~~Pti~~~~~g~~~~y~~g~ 222 (554)
|.|+.|.+....+. ..++ .+..+|...++++.+ .-|.+. +|.| |.+|+ +.||.
T Consensus 33 P~C~fc~~ak~lL~-------~~gv~~~~~~~v~~~~~~r~~l~~~sg~~T-vPqI--FI~g~---~IGG~ 90 (118)
T 2wul_A 33 PQCGFSNAVVQILR-------LHGVRDYAAYNVLDDPELRQGIKDYSNWPT-IPQV--YLNGE---FVGGC 90 (118)
T ss_dssp BSSHHHHHHHHHHH-------HTTCCSCEEEETTSCHHHHHHHHHHHTCCS-SCEE--EETTE---EEECH
T ss_pred CCCHHHHHHHHHHH-------HhCCcCeEeecccCCHHHHHHHHHhccCCC-CCeE--eECCE---EECCH
Confidence 67999987665443 2245 477888888765543 445554 6664 56785 44674
No 461
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=77.96 E-value=14 Score=28.63 Aligned_cols=72 Identities=17% Similarity=0.153 Sum_probs=44.6
Q ss_pred EEEEecCCchhHHHHHHhhc-cCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHh
Q psy16770 264 ALLFQRSLPVRLRYLINAFK-HRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQD 342 (554)
Q Consensus 264 v~~f~~~~~~~~~~~~~a~~-~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~ 342 (554)
+++|....-+........+. .... .|..+|.+ .+++++++|++. .|++++ .++ + . +. +.++...|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~-~~~~vdid--~~~~l~~~~g~~--vPtl~~-~~G-~-~---v~-g~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAG-AFFSVFID--DDAALESAYGLR--VPVLRD-PMG-R-E---LD-WPFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCC-CEEEEECT--TCHHHHHHHTTT--CSEEEC-TTC-C-E---EE-SCCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHh-heEEEECC--CCHHHHHHhCCC--cCeEEE-ECC-E-E---Ee-CCCCHHHHHH
Confidence 44555444444443333331 1111 16778877 688999999996 899987 442 2 1 22 6788889999
Q ss_pred HHhcC
Q psy16770 343 ITDNN 347 (554)
Q Consensus 343 fi~~~ 347 (554)
|++..
T Consensus 71 ~l~~~ 75 (87)
T 1ttz_A 71 WLDAA 75 (87)
T ss_dssp HHHTC
T ss_pred HHHHH
Confidence 98754
No 462
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=77.83 E-value=3.7 Score=34.17 Aligned_cols=44 Identities=7% Similarity=0.117 Sum_probs=29.8
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCcH-------HHHHHhCCc
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ-------GLARRLGVG 201 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~-------~l~~~~~v~ 201 (554)
++.|+.|+|+.|++....+++ .|+.+-.+|..+++ .+.++.|+.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~g~~ 57 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTVPWE 57 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHSCGG
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHcChH
Confidence 556889999999987766654 25677777876543 345566643
No 463
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=77.73 E-value=2.6 Score=38.76 Aligned_cols=46 Identities=15% Similarity=0.110 Sum_probs=33.6
Q ss_pred CCCCCcEEEEEEcccccccccchHHHHHHHH-Hh-CCCCEEEEEEEec
Q psy16770 144 KSYTTPHLILFYSDWCFACLQVEPIFKKLMD-EL-SPLGVGFFTVHVH 189 (554)
Q Consensus 144 ~~~~~~~lV~Fya~wC~~C~~l~p~~~~~a~-~l-~~~~v~~~~Vd~~ 189 (554)
....++.||+|....|++|+++.+......+ .+ ....+++.-.+.-
T Consensus 12 ~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~p 59 (205)
T 3gmf_A 12 NPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNFV 59 (205)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeCC
Confidence 3456678999999999999999987765554 66 2225888766653
No 464
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=77.70 E-value=0.97 Score=43.62 Aligned_cols=29 Identities=10% Similarity=0.199 Sum_probs=24.8
Q ss_pred CCCcEEEEEEcccccccccchHHHHHHHH
Q psy16770 146 YTTPHLILFYSDWCFACLQVEPIFKKLMD 174 (554)
Q Consensus 146 ~~~~~lV~Fya~wC~~C~~l~p~~~~~a~ 174 (554)
..+..++.|.-|.||+|+++.+..++..+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~ 174 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLK 174 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhh
Confidence 46788999999999999999998885544
No 465
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=76.89 E-value=4.8 Score=34.99 Aligned_cols=75 Identities=7% Similarity=-0.071 Sum_probs=44.2
Q ss_pred ccHHHHHhhhhcCCceEEEEEecCCchhHHHHHHhh-------ccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEE
Q psy16770 247 TNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-------KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 319 (554)
Q Consensus 247 ~~~~~fl~~~~~~~~~~v~~f~~~~~~~~~~~~~a~-------~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvf 319 (554)
.++++.++.....++++++.|...--++.+...... .+. ...|..++.+. ...+++.++++.+ .||+++|
T Consensus 31 ~~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~-~~~fv~V~vD~-e~~~~~~~~~v~~-~PT~~f~ 107 (151)
T 3ph9_A 31 QTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMA-QNKFIMLNLMH-ETTDKNLSPDGQY-VPRIMFV 107 (151)
T ss_dssp SSHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHH-HHTCEEEEESS-CCSCGGGCTTCCC-SSEEEEE
T ss_pred hCHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHh-hcCeEEEEecC-CchhhHhhcCCCC-CCEEEEE
Confidence 356655554334688888888654444433322211 111 13466666642 2445778899987 9999999
Q ss_pred eCCCC
Q psy16770 320 KEDKD 324 (554)
Q Consensus 320 k~~~~ 324 (554)
++++.
T Consensus 108 ~~~G~ 112 (151)
T 3ph9_A 108 DPSLT 112 (151)
T ss_dssp CTTSC
T ss_pred CCCCC
Confidence 85444
No 466
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=76.82 E-value=2.4 Score=37.94 Aligned_cols=44 Identities=16% Similarity=0.260 Sum_probs=31.7
Q ss_pred CCCCcEEEEEEcccccccccchHHH-HHHHHHhCC-CCEEEEEEEe
Q psy16770 145 SYTTPHLILFYSDWCFACLQVEPIF-KKLMDELSP-LGVGFFTVHV 188 (554)
Q Consensus 145 ~~~~~~lV~Fya~wC~~C~~l~p~~-~~~a~~l~~-~~v~~~~Vd~ 188 (554)
...++.++.|+.+.|++|..+.+.+ .++.+.+.. .++.+...+.
T Consensus 9 ~~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~ 54 (186)
T 3bci_A 9 KNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNL 54 (186)
T ss_dssp --CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEC
T ss_pred CCCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEec
Confidence 3556789999999999999999988 467666642 2366665554
No 467
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=76.60 E-value=14 Score=31.76 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=29.4
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecc
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIE 411 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~ 411 (554)
+..||.|. .....+......|.+++++ ++ .+.|+.|+.+
T Consensus 38 k~~lv~F~~~~C~~C~~~~~~l~~l~~~--~~--~v~vv~i~~d 77 (165)
T 3ha9_A 38 DVVILWFMAAWCPSCVYMADLLDRLTEK--YR--EISVIAIDFW 77 (165)
T ss_dssp SEEEEEEECTTCTTHHHHHHHHHHHHHH--CT--TEEEEEEECC
T ss_pred CEEEEEEECCCCcchhhhHHHHHHHHHH--cC--CcEEEEEEec
Confidence 45555554 5566778888899999988 86 6999999876
No 468
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=75.61 E-value=5.7 Score=34.73 Aligned_cols=60 Identities=12% Similarity=0.084 Sum_probs=36.2
Q ss_pred CCceEEEEEecCCchhHHHHHHhh-----ccCCceEEEEEEccCCCChh-HHhHhCC--CCCCceEEEEeC
Q psy16770 259 DNKVHALLFQRSLPVRLRYLINAF-----KHRTTIVFGVIVYDQEDSSS-VFQRFKV--PGDKDSLLIFKE 321 (554)
Q Consensus 259 ~~~~~v~~f~~~~~~~~~~~~~a~-----~~~~~v~Fg~v~~~~~~~~~-l~~k~~i--~~~~Ptlvvfk~ 321 (554)
.++++++.|...--++.+.....+ .....+.|..++++ .+.+ ++.+|++ .. .||+++|..
T Consensus 45 ~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d--~~~~~~~~~~~~~~~~-~Pt~~~~d~ 112 (164)
T 1sen_A 45 SGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLE--DEEEPKDEDFSPDGGY-IPRILFLDP 112 (164)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEE--GGGSCSCGGGCTTCSC-SSEEEEECT
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEec--CCchHHHHHhcccCCc-CCeEEEECC
Confidence 467788877554444333332222 12234667778776 3444 7788888 44 899999943
No 469
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=74.66 E-value=19 Score=30.39 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=27.4
Q ss_pred ceEEEEEc-CCCCcchhH-HHHHHHHHhhccCCCCceEEEEEec
Q psy16770 369 KLCVVLFS-EDSPEHDAS-RHTLRRFAQESRFVHNNIAFMYVFI 410 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~-~~~l~~~a~~~~~~~~~v~F~~vd~ 410 (554)
+..+|.|. .....+... ...|.+++++ ++++.+.|+.|+.
T Consensus 29 k~vlv~f~a~wC~~C~~~~~~~l~~l~~~--~~~~~v~~v~v~~ 70 (158)
T 3eyt_A 29 KVIVIEAFQMLCPGCVMHGIPLAQKVRAA--FPEDKVAVLGLHT 70 (158)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHH--SCTTTEEEEEEEC
T ss_pred CEEEEEEECCcCcchhhhhhHHHHHHHHH--hCcCCEEEEEEEe
Confidence 44555444 444555664 7888889888 8766788888875
No 470
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=74.52 E-value=4.3 Score=32.76 Aligned_cols=47 Identities=4% Similarity=0.007 Sum_probs=34.4
Q ss_pred EEEccCC----CChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 292 VIVYDQE----DSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 292 ~v~~~~~----~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
.++++.. .+.+++++|+|.+ .||+++ ++ . .+.|..+.+.|.+|+...
T Consensus 43 ~v~~~~~~~~~~~~~l~~~~~V~~-~PT~~i--~G-~-----~~~G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 43 YVECSPNGPGTPQAQECTEAGITS-YPTWII--NG-R-----TYTGVRSLEALAVASGYP 93 (106)
T ss_dssp EEESCTTCTTSCCCHHHHHTTCCS-SSEEEE--TT-E-----EEESCCCHHHHHHHHTCC
T ss_pred EEEEecccccchhHHHHHHcCCeE-eCEEEE--CC-E-----EecCCCCHHHHHHHhCCc
Confidence 5555521 4678999999997 999877 22 1 367888999999988644
No 471
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=74.27 E-value=17 Score=33.18 Aligned_cols=99 Identities=15% Similarity=0.202 Sum_probs=58.5
Q ss_pred EEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecc-----------------------------cchHHHHhh
Q psy16770 371 CVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIE-----------------------------KQPEFVNAL 420 (554)
Q Consensus 371 cvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~-----------------------------~q~~~~~~~ 420 (554)
.||.|. .....+......|.+++++ ++++.+.|+.|+.+ ...++...|
T Consensus 62 vll~F~a~~C~~C~~~~~~l~~l~~~--~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 139 (218)
T 3u5r_E 62 LLVAFISNRCPFVVLIREALAKFAGD--YAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAY 139 (218)
T ss_dssp EEEEECCSSCHHHHTTHHHHHHHHHH--HTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHH
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHH--HHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHc
Confidence 455554 3344456667788888888 87666888888773 122333333
Q ss_pred CCCCCCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 421 TSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 421 ~~~~~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
. ...+|.++..+.++ .+|...-.. ..+-.....+.+.|.+.|+++++|+..
T Consensus 140 -------~-v~~~P~~~liD~~G~i~~~g~~d~-~~~~~~~~~~~~~l~~~i~~ll~~~~~ 191 (218)
T 3u5r_E 140 -------G-AACTPDFFLYDRERRLVYHGQFDD-ARPGNGKDVTGADLRAAVDAVLKGKDV 191 (218)
T ss_dssp -------T-CCEESEEEEECTTCBEEEEECSSS-CCTTSCCCCCCHHHHHHHHHHHTTCCC
T ss_pred -------C-CCCCCeEEEECCCCcEEEeccccc-cccccccccCHHHHHHHHHHHHcCCCC
Confidence 1 13556555556565 666533221 000112245678999999999999875
No 472
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=73.81 E-value=19 Score=30.44 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=27.8
Q ss_pred ceEEEEEc-CCCCcchh-HHHHHHHHHhhccCCCCceEEEEEec
Q psy16770 369 KLCVVLFS-EDSPEHDA-SRHTLRRFAQESRFVHNNIAFMYVFI 410 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~-~~~~l~~~a~~~~~~~~~v~F~~vd~ 410 (554)
+..+|.|. .....+.. ....|.+++++ ++++.+.|+.|+.
T Consensus 31 k~vlv~F~a~~C~~C~~e~~~~l~~l~~~--~~~~~v~~v~v~~ 72 (160)
T 3lor_A 31 KVVVVEVFQMLCPGCVNHGVPQAQKIHRM--IDESQVQVIGLHS 72 (160)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHH--SCTTTEEEEEEEC
T ss_pred CEEEEEEEcCCCcchhhhhhHHHHHHHHH--hCcCCcEEEEEec
Confidence 44455444 44555666 47888999988 8766789988875
No 473
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=73.16 E-value=17 Score=30.49 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=31.7
Q ss_pred ceEEEEEc-CCCCc--chhHHHHHHHHHhhccC-CCCceEEEEEecccch
Q psy16770 369 KLCVVLFS-EDSPE--HDASRHTLRRFAQESRF-VHNNIAFMYVFIEKQP 414 (554)
Q Consensus 369 ~lcvvl~~-~~~~~--~~~~~~~l~~~a~~~~~-~~~~v~F~~vd~~~q~ 414 (554)
+..+|.|. ..... +......|.++.++ + +++.+.|+.|+.+...
T Consensus 34 k~vll~F~a~~C~~v~C~~~~~~l~~l~~~--~~~~~~~~~v~v~~d~~~ 81 (150)
T 3fw2_A 34 KSLLINFWASWNDSISQKQSNSELREIYKK--YKKNKYIGMLGISLDVDK 81 (150)
T ss_dssp SEEEEEEECTTCCCHHHHHHHHHHHHHHHH--HTTCSSEEEEEEECCSCH
T ss_pred CEEEEEEEeCCCCchHHHHHHHHHHHHHHH--hccCCCeEEEEEEcCCCH
Confidence 44555554 45566 77888899999988 8 6666999999887543
No 474
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=73.15 E-value=13 Score=33.03 Aligned_cols=99 Identities=18% Similarity=0.286 Sum_probs=55.1
Q ss_pred EEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEeccc-----------------------------chHHHHhh
Q psy16770 371 CVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEK-----------------------------QPEFVNAL 420 (554)
Q Consensus 371 cvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~-----------------------------q~~~~~~~ 420 (554)
.||.|. .....+......|.+++++ +.++.+.|+.|+.+. ..++.+.|
T Consensus 49 vlv~F~a~~C~~C~~~~~~l~~l~~~--~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 49 TVIMFICNHCPFVKHVQHELVRLAND--YMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHH--HGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHH--HHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 444444 3344555666778888877 765568888888731 12233333
Q ss_pred CCCCCCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 421 TSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 421 ~~~~~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
. ...+|.++..+.++ ..|...-.... +-.....+.+.|.+.|+++++++..
T Consensus 127 -------~-v~~~P~~~lid~~G~i~~~~~~~~~~-~~~~g~~~~~~l~~~i~~ll~~~~~ 178 (196)
T 2ywi_A 127 -------D-AACTPDFYIFDRDLKCVYRGQLDDSR-PNNGIPVTGESIRAALDALLEGRPV 178 (196)
T ss_dssp -------T-CCEESEEEEEETTCBEEEEECSSSCC-TTTCCCCCCHHHHHHHHHHHHTCCC
T ss_pred -------C-CCCCCeEEEEcCCCeEEEccccCccc-ccccCccCHHHHHHHHHHHHcCCCC
Confidence 0 13556555555555 55543211000 0001134678999999999988764
No 475
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=72.20 E-value=34 Score=27.52 Aligned_cols=84 Identities=8% Similarity=0.146 Sum_probs=60.5
Q ss_pred EEEEEEcccccccccchHHHHHHHHHhC-CCCEEEEEEEecCcHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHH
Q psy16770 150 HLILFYSDWCFACLQVEPIFKKLMDELS-PLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKM 228 (554)
Q Consensus 150 ~lV~Fya~wC~~C~~l~p~~~~~a~~l~-~~~v~~~~Vd~~~~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i 228 (554)
....|.+..-+.+.+......++.+.+. +..+.+-.||..+++.+++.++|-. .||++=....-....-|+. -.+.+
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvA-TPTLIK~~P~P~rriiGd~-i~~ql 90 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVV-TPALVKIGPGSRQVLSGID-LTDQL 90 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCS-SSEEEEEESSSCEEEESSC-HHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeee-ccHhhccCCCCceEEeChH-HHHHH
Confidence 4446777777778777767777666555 4469999999999999999999996 9998654333333444554 45788
Q ss_pred HHHHHHh
Q psy16770 229 VEFFRLK 235 (554)
Q Consensus 229 ~~fl~~~ 235 (554)
..|.-+.
T Consensus 91 ~~wwprW 97 (105)
T 1t4y_A 91 ANQLPQW 97 (105)
T ss_dssp HHHHHHH
T ss_pred HHHhHHH
Confidence 8887543
No 476
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=72.02 E-value=1.9 Score=46.62 Aligned_cols=55 Identities=22% Similarity=0.403 Sum_probs=37.5
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc---H----HHHHHhCCcCCCCcceeccCCeE
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE---Q----GLARRLGVGSQLPQIALLTDGRT 215 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~---~----~l~~~~~v~~~~Pti~~~~~g~~ 215 (554)
++.|..+||++|++....+++. ++.+..+|.+.. . .+.+..|... +|.+ |.+|+.
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~~-------~i~~~~~dv~~~~~~~~~~~~l~~~~g~~t-vP~v--~i~g~~ 81 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAEA-------KIKHATIELDQLSNGSAIQKCLASFSKIET-VPQM--FVRGKF 81 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHTHHHHSCCC-SCEE--EETTEE
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEEcccCcchHHHHHHHHHHhCCce-eCEE--EECCEE
Confidence 6669999999999877766632 455666777643 2 3344567776 8987 456754
No 477
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=71.85 E-value=1.9 Score=43.32 Aligned_cols=60 Identities=17% Similarity=0.168 Sum_probs=34.9
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEe------cCc----HHHHHHhCCcCCCCcceeccCCeEEEEeC
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV------HNE----QGLARRLGVGSQLPQIALLTDGRTSFFKE 220 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~------~~~----~~l~~~~~v~~~~Pti~~~~~g~~~~y~~ 220 (554)
++.|..+||++|++.... .|+..++.+..+|. +.+ ..|.+..|... +|.|. .+|+ ..|
T Consensus 263 VvVYsk~~CPyC~~Ak~~------LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~T-VPqVF--I~Gk---~IG 330 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNT------LFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRT-VPNIY--INGK---HIG 330 (362)
T ss_dssp EEEEECTTCHHHHHHHHH------HHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCS-SCEEE--ETTE---EEE
T ss_pred EEEEEcCCCcchHHHHHH------HHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCC-cCEEE--ECCE---EEE
Confidence 566999999999865431 12333343322222 122 34556678886 99864 4775 346
Q ss_pred Cc
Q psy16770 221 PS 222 (554)
Q Consensus 221 g~ 222 (554)
|.
T Consensus 331 G~ 332 (362)
T 2jad_A 331 GN 332 (362)
T ss_dssp SH
T ss_pred Ch
Confidence 64
No 478
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=70.27 E-value=3.7 Score=37.55 Aligned_cols=45 Identities=22% Similarity=0.353 Sum_probs=35.2
Q ss_pred cHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 191 EQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 191 ~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+...+.++||.| +||+++..+|+...-..|..+.+.+++.+.+.+
T Consensus 158 ~~~~a~~~gv~g-~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 158 QLSLAKSLGVNS-YPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHHTTCCS-SSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCc-ccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 456788999998 999999888877665556667788888777653
No 479
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=67.79 E-value=17 Score=30.50 Aligned_cols=44 Identities=9% Similarity=0.073 Sum_probs=29.2
Q ss_pred CChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHh
Q psy16770 299 DSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 345 (554)
Q Consensus 299 ~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~ 345 (554)
.+..+++.|++.. .|+++++.++... .....+..+...+.++|+
T Consensus 105 ~~~~~~~~~~v~~-~P~~~~id~~G~i--~~~~~g~~~~~~l~~~l~ 148 (156)
T 1kng_A 105 ANGRASIEWGVYG-VPETFVVGREGTI--VYKLVGPITPDNLRSVLL 148 (156)
T ss_dssp TTSHHHHHTTCCS-SCEEEEECTTSBE--EEEEESCCCHHHHHHTHH
T ss_pred chhHHHHhcCcCc-cCeEEEEcCCCCE--EEEEeCCCCHHHHHHHHH
Confidence 3557889999997 9987777543321 123556667777776665
No 480
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=67.56 E-value=15 Score=26.63 Aligned_cols=49 Identities=10% Similarity=0.102 Sum_probs=34.6
Q ss_pred ccCCceEEEEEEccCCCChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCC-ChhHHHhHH
Q psy16770 283 KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSI-PVPTLQDIT 344 (554)
Q Consensus 283 ~~~~~v~Fg~v~~~~~~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~-~~~~l~~fi 344 (554)
.+.+.+.+..++ +.+++++|+|.+ .||+++ + ++ .+..|.. +.+.|.+|+
T Consensus 27 ~~~~~~~~~~v~-----~~~~~~~~~v~~-~Pt~~~--~-G~----~~~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 27 ELGIDAEFEKIK-----EMDQILEAGLTA-LPGLAV--D-GE----LKIMGRVASKEEIKKIL 76 (77)
T ss_dssp HTTCCEEEEEEC-----SHHHHHHHTCSS-SSCEEE--T-TE----EEECSSCCCHHHHHHHC
T ss_pred HcCCceEEEEec-----CHHHHHHCCCCc-CCEEEE--C-CE----EEEcCCCCCHHHHHHHh
Confidence 445678888774 688999999997 999998 2 22 2223665 677777765
No 481
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=67.42 E-value=13 Score=32.26 Aligned_cols=21 Identities=14% Similarity=0.352 Sum_probs=18.5
Q ss_pred hhHHhHhCCCCCCceEEEEeCC
Q psy16770 301 SSVFQRFKVPGDKDSLLIFKED 322 (554)
Q Consensus 301 ~~l~~k~~i~~~~Ptlvvfk~~ 322 (554)
..++++|+|.. .|+++++.++
T Consensus 118 ~~l~~~~~v~~-~Pt~~lid~~ 138 (165)
T 3s9f_A 118 EALTKKYSVES-IPTLIGLNAD 138 (165)
T ss_dssp HHHHHHTTCCS-SSEEEEEETT
T ss_pred HHHHHHcCCCC-CCEEEEEeCC
Confidence 67899999997 9999999864
No 482
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=67.30 E-value=13 Score=32.72 Aligned_cols=96 Identities=8% Similarity=0.053 Sum_probs=55.2
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCce------EEEEEeccc-chHHHHhhCCCCCC------------cc
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNI------AFMYVFIEK-QPEFVNALTSPEDS------------SE 428 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v------~F~~vd~~~-q~~~~~~~~~~~~~------------~~ 428 (554)
+..||.|. .....+......|.+++++ ++++.+ .|+.|+.+. ..+.+..+....+. ..
T Consensus 60 k~vlv~F~a~~C~~C~~~~~~l~~l~~~--~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 60 QVVILNAWGQWCAPCRSESDDLQIIHEE--LQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH--HHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CEEEEEEECCcCHhHHHHHHHHHHHHHH--HHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 44555554 4455667777788888887 765446 999998876 45545544111000 00
Q ss_pred -----ccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhc
Q psy16770 429 -----ISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVN 476 (554)
Q Consensus 429 -----~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~ 476 (554)
....+|..+..+.++ ..+. ..+ ..+.+.|.++|+++++
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~-~~g---------~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAV-FLR---------EVTSKDVLDVALPLVD 181 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEE-ECS---------CCCHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEE-EcC---------CCCHHHHHHHHHHHHh
Confidence 012456444445555 4443 333 2467889999998875
No 483
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=67.03 E-value=11 Score=31.48 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=27.6
Q ss_pred CceEEEEEEccCCC----------------------ChhHHhHhCCCCCCceEEEEe-CCC
Q psy16770 286 TTIVFGVIVYDQED----------------------SSSVFQRFKVPGDKDSLLIFK-EDK 323 (554)
Q Consensus 286 ~~v~Fg~v~~~~~~----------------------~~~l~~k~~i~~~~Ptlvvfk-~~~ 323 (554)
..+.+..++++... +..++++|+|.. .|+++++. ++.
T Consensus 61 ~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~Pt~~lid~~~G 120 (144)
T 1o73_A 61 KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVES-IPTLITINADTG 120 (144)
T ss_dssp TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCS-SSEEEEEETTTC
T ss_pred CCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCC-CCEEEEEECCCC
Confidence 57888888776321 346889999997 99999998 443
No 484
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=66.13 E-value=11 Score=31.56 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=38.2
Q ss_pred CceEEEEEecCCchhHHHHH----H-hhccC--CceEEEEEEccCCC----------------------ChhHHhHhCCC
Q psy16770 260 NKVHALLFQRSLPVRLRYLI----N-AFKHR--TTIVFGVIVYDQED----------------------SSSVFQRFKVP 310 (554)
Q Consensus 260 ~~~~v~~f~~~~~~~~~~~~----~-a~~~~--~~v~Fg~v~~~~~~----------------------~~~l~~k~~i~ 310 (554)
++++++.|....-+..+... . ..++. +.+.+..++++... +..++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 56777766443323222111 1 11333 47888888776311 35789999999
Q ss_pred CCCceEEEEe-CCC
Q psy16770 311 GDKDSLLIFK-EDK 323 (554)
Q Consensus 311 ~~~Ptlvvfk-~~~ 323 (554)
. .|+++++. ++.
T Consensus 108 ~-~Pt~~lid~~~G 120 (146)
T 1o8x_A 108 S-IPTLIGVDADSG 120 (146)
T ss_dssp S-SSEEEEEETTTC
T ss_pred C-CCEEEEEECCCC
Confidence 7 99999998 443
No 485
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=64.74 E-value=20 Score=30.43 Aligned_cols=91 Identities=12% Similarity=0.016 Sum_probs=52.3
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEeccc----------------------------chHHHHh
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEK----------------------------QPEFVNA 419 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~----------------------------q~~~~~~ 419 (554)
+..+|.|. .....+......|.+++++ ++.+.+.++.|..+. ..++++.
T Consensus 39 k~vlv~F~a~~C~~C~~~~~~l~~l~~~--~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 39 KPTLIKFWASWCPLCLSELGQAEKWAQD--AKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHTC--GGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHH--cccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 45555555 3445566677788888877 655557777776421 1222222
Q ss_pred hCCCCCCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCC
Q psy16770 420 LTSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 479 (554)
Q Consensus 420 ~~~~~~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~ 479 (554)
| . ...+|.++..+.++ ..+. +.| ..+.+.|.++|+++++...
T Consensus 117 ~-------~-v~~~P~~~lid~~G~i~~~-~~g---------~~~~~~l~~~i~~~~~~~~ 159 (164)
T 2h30_A 117 L-------N-ISVYPSWALIGKDGDVQRI-VKG---------SINEAQALALIRNPNADLG 159 (164)
T ss_dssp T-------T-CCSSSEEEEECTTSCEEEE-EES---------CCCHHHHHHHHHCTTCCCG
T ss_pred c-------C-CCccceEEEECCCCcEEEE-EcC---------CCCHHHHHHHHHHHHHHHH
Confidence 2 0 12566665555555 4443 334 2467889999998876443
No 486
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=63.31 E-value=45 Score=29.10 Aligned_cols=99 Identities=18% Similarity=0.282 Sum_probs=55.7
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEeccc-----------------------------chHHHH
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEK-----------------------------QPEFVN 418 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~-----------------------------q~~~~~ 418 (554)
+..||.|. .....+......|.+++++ +.++ +.|+.|+.+. ..++..
T Consensus 34 k~vlv~F~a~~C~~C~~~~~~l~~l~~~--~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 110 (188)
T 2cvb_A 34 PLLAVVFMCNHCPYVKGSIGELVALAER--YRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAK 110 (188)
T ss_dssp SEEEEEEECSSCHHHHTTHHHHHHHHHH--TTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHH
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHH--hhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHH
Confidence 44555554 3344455666788888888 8766 8888887731 112222
Q ss_pred hhCCCCCCccccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 419 ALTSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 419 ~~~~~~~~~~~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
.| . ...+|.++..+.++ ..+...... . .-.....+.+.|.+.|+++++++..
T Consensus 111 ~~-------~-v~~~P~~~lid~~G~i~~~g~~~~-~-~~~~g~~~~~~l~~~i~~ll~~~~~ 163 (188)
T 2cvb_A 111 AY-------R-ALRTPEVFLFDERRLLRYHGRVND-N-PKDPSKVQSHDLEAAIEALLRGEEP 163 (188)
T ss_dssp HT-------T-CCEESEEEEECTTCBEEEEECSSS-C-TTCGGGCCCCHHHHHHHHHHTTCCC
T ss_pred Hc-------C-CCCCCeEEEECCCCcEEEEEecCC-c-cccccccCHHHHHHHHHHHHcCCCC
Confidence 22 0 13566555556555 555421110 0 0001123568899999999998765
No 487
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=63.15 E-value=11 Score=31.40 Aligned_cols=63 Identities=16% Similarity=0.146 Sum_probs=38.0
Q ss_pred CceEEEEEecCCchhHHHHH----H-hhccC--CceEEEEEEccCCC----------------------ChhHHhHhCCC
Q psy16770 260 NKVHALLFQRSLPVRLRYLI----N-AFKHR--TTIVFGVIVYDQED----------------------SSSVFQRFKVP 310 (554)
Q Consensus 260 ~~~~v~~f~~~~~~~~~~~~----~-a~~~~--~~v~Fg~v~~~~~~----------------------~~~l~~k~~i~ 310 (554)
++++++.|...--+..+... . ..++. +.+.+..++++... +..++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 56777766443322222111 1 11333 47888888776311 25789999999
Q ss_pred CCCceEEEEe-CCC
Q psy16770 311 GDKDSLLIFK-EDK 323 (554)
Q Consensus 311 ~~~Ptlvvfk-~~~ 323 (554)
. .|+++++. ++.
T Consensus 108 ~-~P~~~lid~~~G 120 (144)
T 1i5g_A 108 S-IPTLVGVEADSG 120 (144)
T ss_dssp S-SSEEEEEETTTC
T ss_pred C-CCEEEEEECCCC
Confidence 7 99999997 443
No 488
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=62.49 E-value=16 Score=32.19 Aligned_cols=63 Identities=10% Similarity=0.071 Sum_probs=39.5
Q ss_pred CCceEEEEEecCCchhHHHHH----HhhccCCceEEEEEEccCCCChhHHhHhC---CCCCCceEEEEeCCCC
Q psy16770 259 DNKVHALLFQRSLPVRLRYLI----NAFKHRTTIVFGVIVYDQEDSSSVFQRFK---VPGDKDSLLIFKEDKD 324 (554)
Q Consensus 259 ~~~~~v~~f~~~~~~~~~~~~----~a~~~~~~v~Fg~v~~~~~~~~~l~~k~~---i~~~~Ptlvvfk~~~~ 324 (554)
..+++++.|...--++.+... ..+...+.+.|..++.+ .+++++++|. +.+ .||+++|+++..
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d--~~~~~~~~~~~~~v~~-iPt~i~~~~~G~ 122 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKG--RAEDDLRQRLALERIA-IPLVLVLDEEFN 122 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHH--HHHHHTTTTTTCSSCC-SSEEEEECTTCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECC--CCHHHHHHHHHcCCCC-cCeEEEECCCCC
Confidence 356777777443333322221 11122347889888776 5677888887 886 999999987544
No 489
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=62.35 E-value=19 Score=30.95 Aligned_cols=44 Identities=5% Similarity=-0.028 Sum_probs=29.1
Q ss_pred CChhHHhHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHh
Q psy16770 299 DSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 345 (554)
Q Consensus 299 ~~~~l~~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~ 345 (554)
.+..++++|+|.. .|+.+++.++.. ......+..+...+.++|+
T Consensus 113 ~~~~~~~~~~v~~-~P~~~lid~~G~--i~~~~~g~~~~~~l~~~l~ 156 (168)
T 2b1k_A 113 GDGMLGLDLGVYG-APETFLIDGNGI--IRYRHAGDLNPRVWEEEIK 156 (168)
T ss_dssp TTCHHHHHHTCCS-SSEEEEECTTSB--EEEEEESCCCHHHHHHTTH
T ss_pred cchHHHHHcCccc-cCEEEEECCCCe--EEEEEeCCCCHHHHHHHHH
Confidence 4567899999997 897776654332 1234556677777766665
No 490
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=61.44 E-value=7.1 Score=34.71 Aligned_cols=40 Identities=13% Similarity=0.341 Sum_probs=29.8
Q ss_pred cHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 191 EQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 191 ~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+..+++++||.| +||+++ ||+. ..|..+.+.+.+.+.+.+
T Consensus 138 ~~~~a~~~gv~G-tPt~vv--nG~~---~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 138 DKKIAKDNHIKT-TPTAFI--NGEK---VEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHHHHTTCCS-SSEEEE--TTEE---CSCTTCHHHHHHHHHC--
T ss_pred HHHHHHHcCCCC-CCeEEE--CCEE---cCCCCCHHHHHHHHHHHH
Confidence 456889999998 999887 7864 235567899998887654
No 491
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=60.92 E-value=3.7 Score=34.77 Aligned_cols=52 Identities=13% Similarity=0.291 Sum_probs=33.0
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc----HHHHHHhCCcCCCCcceec
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE----QGLARRLGVGSQLPQIALL 210 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~----~~l~~~~~v~~~~Pti~~~ 210 (554)
++.|+.|+|+.|++....+++ .|+.+-.+|..++ .++.+-++-.+ .|.-.++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~el~~~l~~~~-~~~~~l~ 58 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSIDEIKQILRMTE-DGTDEII 58 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHTCS-SCGGGTB
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHHHHHHHHHHcC-CCHHHhh
Confidence 556889999999987766553 2567777887765 34544444333 4433444
No 492
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=60.48 E-value=26 Score=29.64 Aligned_cols=49 Identities=12% Similarity=0.288 Sum_probs=32.9
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccchHHHHh
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNA 419 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q~~~~~~ 419 (554)
+..+|.|. .....+......|.+++++ ++++.+.++.|+.+...+.+..
T Consensus 36 k~vll~F~a~wC~~C~~~~~~l~~l~~~--~~~~~~~vv~i~~d~~~~~~~~ 85 (152)
T 2lrt_A 36 KVVLIDFTVYNNAMSAAHNLALRELYNK--YASQGFEIYQISLDGDEHFWKT 85 (152)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH--HGGGTEEEEEEECSCCHHHHHH
T ss_pred CEEEEEEEcCCChhhHHHHHHHHHHHHH--hccCCeEEEEEEccCCHHHHHH
Confidence 44555554 4445566677788888888 8765699999988766554333
No 493
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=60.35 E-value=41 Score=27.60 Aligned_cols=37 Identities=14% Similarity=0.265 Sum_probs=26.4
Q ss_pred hHhCCCCCCceEEEEeCCCCCCCceeecCCCChhHHHhHHhcC
Q psy16770 305 QRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 347 (554)
Q Consensus 305 ~k~~i~~~~Ptlvvfk~~~~~~~~~i~~~~~~~~~l~~fi~~~ 347 (554)
+.|+|.. .|+++++.++.. .+. +..+.+.|.++|+..
T Consensus 103 ~~~~v~~-~P~~~lid~~G~----i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 103 QLYDIRA-TPTIYLLDGRKR----VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp TCSCCCS-SSEEEEECTTCB----EEE-CSCCHHHHHHHHHC-
T ss_pred HHcCCCC-CCeEEEECCCCC----EEe-cCCCHHHHHHHHHHH
Confidence 3899997 999999965433 233 557788888888754
No 494
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=56.17 E-value=5.2 Score=32.84 Aligned_cols=34 Identities=9% Similarity=0.070 Sum_probs=24.9
Q ss_pred EEEEEcccccccccchHHHHHHHHHhCCCCEEEEEEEecCc
Q psy16770 151 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE 191 (554)
Q Consensus 151 lV~Fya~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~ 191 (554)
++.|+.|+|+.|++....+++ .|+.+-.+|..++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeecCC
Confidence 456889999999887655553 3677778887754
No 495
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=55.55 E-value=31 Score=31.73 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=47.5
Q ss_pred cccccccccchHHHHHHHHHhCCCCEEEEEEEecCcHHHHHHhCCcC-----------CCCcceeccCCeEEEEeCCccc
Q psy16770 156 SDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS-----------QLPQIALLTDGRTSFFKEPSFS 224 (554)
Q Consensus 156 a~wC~~C~~l~p~~~~~a~~l~~~~v~~~~Vd~~~~~~l~~~~~v~~-----------~~Pti~~~~~g~~~~y~~g~~~ 224 (554)
++||++|.+.. ++-.+++..+....||-..-+..+.+.|... .+|+|..-.+|.++ .+
T Consensus 19 ~~~SP~~~kvr-----~~L~~kgi~y~~~~v~~~~~~~~~~~~g~~~~~~~~~~~P~~~VPvL~~~d~g~~l------~E 87 (253)
T 4f03_A 19 SPWSPNTWKIR-----YALNYKGLKYKTEWVEYPDIAGVVQKLGGKPTEKTPDGRDHYTLPVIYDPNTKKVV------ED 87 (253)
T ss_dssp CCCCHHHHHHH-----HHHHHHTCCEEEEECCGGGHHHHHHHHTCCCSEECTTCCEECCSCEEEETTTTEEE------ES
T ss_pred CCcChhHHHHH-----HHHHHcCCCCEEEEEccccchhhhhhcCCCCchhhHhhCCCCccCeEEeCCCCEEE------ec
Confidence 68999998865 3334456667777788777677777766532 35555443334322 23
Q ss_pred HHHHHHHHHHhCCCC
Q psy16770 225 VQKMVEFFRLKLPYK 239 (554)
Q Consensus 225 ~~~i~~fl~~~~~~~ 239 (554)
...|..|+.+..|..
T Consensus 88 S~aI~~YL~~~~p~~ 102 (253)
T 4f03_A 88 SAAIAKYLDETYPDT 102 (253)
T ss_dssp HHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHhCCCC
Confidence 488999999988654
No 496
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=55.00 E-value=8.4 Score=34.48 Aligned_cols=42 Identities=14% Similarity=0.323 Sum_probs=30.0
Q ss_pred cHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHh
Q psy16770 191 EQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLK 235 (554)
Q Consensus 191 ~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~ 235 (554)
+..+++++||+| +||+++ ||+......|..+.+.+.+-+...
T Consensus 141 ~~~~a~~~gv~G-tPtfvv--ng~~~v~~~Ga~~~e~~~~~i~~l 182 (185)
T 3feu_A 141 AKMLSEKSGISS-VPTFVV--NGKYNVLIGGHDDPKQIADTIRYL 182 (185)
T ss_dssp HHHHHHHHTCCS-SSEEEE--TTTEEECGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCc-cCEEEE--CCEEEEecCCCCCHHHHHHHHHHH
Confidence 557789999998 999987 787543333445777777766554
No 497
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=51.73 E-value=1e+02 Score=27.02 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=56.4
Q ss_pred ceEEEEEc--CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecccc---hHHHHhh----C------CC-CC-Ccc--c
Q psy16770 369 KLCVVLFS--EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQ---PEFVNAL----T------SP-ED-SSE--I 429 (554)
Q Consensus 369 ~lcvvl~~--~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~q---~~~~~~~----~------~~-~~-~~~--~ 429 (554)
+..||.|. .....+......|.++.++ ++.+.+.++.|..+.. .+|++.+ - .+ .+ ... .
T Consensus 46 k~vvl~F~~a~~C~~C~~~~~~l~~l~~~--~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 46 KWRVVFFWPKDFTFVCPTEIAAFSKLNDE--FEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp CEEEEEECSCTTSCCCHHHHHHHHHTHHH--HHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CcEEEEEEcCCCCCCcHHHHHHHHHHHHH--HHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 45556555 3455667778888888877 7655688888877541 1222221 0 00 00 000 0
Q ss_pred cc-----eEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCCCC
Q psy16770 430 SL-----HIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 480 (554)
Q Consensus 430 ~~-----~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~~~ 480 (554)
.. .+|.++..+.++ .++...... ....+.+.|.+.|++++.|...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~------~~~~~~~~l~~~l~~l~~~~~~ 174 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAG------SVGRNVDEVLRVLDALQSDELC 174 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECT------TCCCCHHHHHHHHHHHHC----
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCC------CCCCCHHHHHHHHHHHhhCCCc
Confidence 12 567666666665 556544321 0123578899999999886654
No 498
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=50.80 E-value=6.2 Score=35.16 Aligned_cols=43 Identities=12% Similarity=0.207 Sum_probs=30.7
Q ss_pred cHHHHHHhCCcCCCCcceeccCCeEEEEeCCcccHHHHHHHHHHhC
Q psy16770 191 EQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 236 (554)
Q Consensus 191 ~~~l~~~~~v~~~~Pti~~~~~g~~~~y~~g~~~~~~i~~fl~~~~ 236 (554)
+..+++++||.| +||+++ +|+...-.+|..+.+.+.+.+...+
T Consensus 151 ~~~~a~~~gv~g-tPt~~i--ng~~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQG-VPAYVV--NGKYLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHC-SSEEEE--TTTEEECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCc-cCEEEE--CCEEEeccCCCCCHHHHHHHHHHHH
Confidence 456789999998 999765 7765433335557788888877643
No 499
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=50.07 E-value=79 Score=27.61 Aligned_cols=41 Identities=2% Similarity=-0.014 Sum_probs=29.2
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEecc
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIE 411 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~ 411 (554)
+..+|.|. .....+......|.++.++ ++++.+.++.|.++
T Consensus 47 k~vlv~F~atwC~~C~~~~p~l~~l~~~--~~~~~~~vi~is~d 88 (187)
T 3dwv_A 47 SPLLIYNVASKCGYTKGGYETATTLYNK--YKSQGFTVLAFPSN 88 (187)
T ss_dssp SCEEEEEECCBCSCCTTHHHHHHHHHHH--HGGGTCEEEEEEBC
T ss_pred CEEEEEEecCCCCCcHHHHHHHHHHHHH--hhhCCeEEEEEECc
Confidence 44455443 4556778888899999988 87666888887654
No 500
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=49.66 E-value=62 Score=32.13 Aligned_cols=98 Identities=13% Similarity=0.104 Sum_probs=53.9
Q ss_pred ceEEEEEc-CCCCcchhHHHHHHHHHhhccCCCCceEEEEEeccc---------chHHHHhhCCC------C-C-Cc--c
Q psy16770 369 KLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEK---------QPEFVNALTSP------E-D-SS--E 428 (554)
Q Consensus 369 ~lcvvl~~-~~~~~~~~~~~~l~~~a~~~~~~~~~v~F~~vd~~~---------q~~~~~~~~~~------~-~-~~--~ 428 (554)
+..||.|. .....+......|.+++++ ++++.+.++.|+++. ..++++.+-.. . . .. -
T Consensus 83 K~vLl~F~atwC~~C~~~~p~L~~l~~~--~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 83 KVVLIDFWAYSCINCQRAIPHVVGWYQA--YKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH--HGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHH--hhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 44555554 4455667777888888888 876568898887532 11222221000 0 0 00 0
Q ss_pred ccceEEEEEEecCCC-eeEEEecCCCCCcccccchhhHHHHHHHHhhhcCC
Q psy16770 429 ISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDP 478 (554)
Q Consensus 429 ~~~~~~~v~~~~~~~-~ky~~~~~~~~~~~~~~~~t~e~l~~fl~~~~~g~ 478 (554)
....+|.++..+.++ .++. ..|. .+.+.|.++|+++++..
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~-~~G~---------~~~~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHI-KFGE---------GDYNVTETLVRQLLNDA 201 (352)
T ss_dssp TCCEESEEEEECTTSBEEEE-EESB---------CCHHHHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEE-EcCC---------CCHHHHHHHHHHHHhhc
Confidence 013567665566665 4443 3331 35677888888877543
Done!