RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16770
(554 letters)
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 82.5 bits (203), Expect = 4e-20
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 20 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 79
D Y+TLG+ R AS +EI++ Y+R + +HPDKN +P A+EKF ++ EAY++LSD +R+
Sbjct: 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63
Query: 80 YDLFGTTDGFSG 91
+D +G +G G
Sbjct: 64 FDRYG-EEGLKG 74
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain
{Escherichia coli [TaxId: 562]}
Length = 75
Score = 77.7 bits (191), Expect = 2e-18
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 20 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKN-NDPTAQEKFLQLTEAYNILSDAERRK 78
D YE LGV +TA +EIRK YKRL +++HPD+N D A+ KF ++ EAY +L+D+++R
Sbjct: 4 DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63
Query: 79 QYDLFG 84
YD +G
Sbjct: 64 AYDQYG 69
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3
(J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 74.3 bits (182), Expect = 4e-17
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 20 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEK-------FLQLTEAYNILS 72
D Y LG +A++ ++++ Y++L++ +HPDK + F+++ +A+ IL
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 73 DAERRKQYDLFGTTDGFSG 91
+ E +K+YDL + SG
Sbjct: 77 NEETKKKYDLQR-SGPSSG 94
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain
{Murine polyomavirus [TaxId: 10634]}
Length = 79
Score = 69.6 bits (170), Expect = 1e-15
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Query: 18 SLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAE 75
E L +PR +++ YK+ + HPDK +L +
Sbjct: 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEV 66
Query: 76 RRKQYDLFGTT 86
+ +L GT
Sbjct: 67 YNLRMNLGGTG 77
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain
{Escherichia coli [TaxId: 562]}
Length = 76
Score = 67.4 bits (164), Expect = 7e-15
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 19 LDPYETLGVPRTASL--QEIRKNYKRLVVEWHPDKNNDPTAQEK------FLQLTEAYNI 70
+D + G+P L Q + ++ L ++HPDK + E+ + +A+
Sbjct: 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60
Query: 71 LSDAERRKQYDL 82
L R +Y L
Sbjct: 61 LRHPLMRAEYLL 72
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain
{Simian virus 40, Sv40 [TaxId: 10633]}
Length = 114
Score = 68.7 bits (167), Expect = 8e-15
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 18 SLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAE 75
SL + LG+ R+A ++ +RK Y + E+HPDK D +K Y + D
Sbjct: 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKM---NTLYKKMEDGV 63
Query: 76 RRKQYDLFGTTDGFSGQDSASRNFHNHMYNPF--DDVFSEGFNFPFEEHD 123
+ FG + + + +N F +++F ++
Sbjct: 64 KYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSSDDEA 113
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId:
9913]}
Length = 98
Score = 64.6 bits (157), Expect = 1e-13
Identities = 12/65 (18%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 20 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQ----EKFLQLTEAYNILSDAE 75
++ +G+ + ++++K Y++ V+ HPDK + F++L +A++ +
Sbjct: 34 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG 93
Query: 76 RRKQY 80
++ Y
Sbjct: 94 QKPLY 98
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 88
Score = 58.5 bits (141), Expect = 1e-11
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 20 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTA--QEKFLQLTEAYNILSDAERR 77
+ + E +K +RL ++WHPDKN + E F L N L
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76
Query: 78 KQYD 81
Q
Sbjct: 77 DQNA 80
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 40.4 bits (94), Expect = 8e-05
Identities = 6/68 (8%), Positives = 17/68 (25%)
Query: 140 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 199
++I + L+ + +L+ E + + + R
Sbjct: 23 DWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFN 82
Query: 200 VGSQLPQI 207
V +
Sbjct: 83 VRRFPATL 90
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 38.5 bits (89), Expect = 4e-04
Identities = 6/61 (9%), Positives = 14/61 (22%)
Query: 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208
L+ + +L+ E + + + R GV +
Sbjct: 38 VVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLV 97
Query: 209 L 209
Sbjct: 98 F 98
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein
C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 34.7 bits (79), Expect = 0.004
Identities = 9/64 (14%), Positives = 17/64 (26%), Gaps = 3/64 (4%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 195
N + P L LF C C + + + + D + + +
Sbjct: 4 GSSGNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYKDR---FILQEVDITLPENSTWY 60
Query: 196 RRLG 199
R
Sbjct: 61 ERYK 64
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 32.7 bits (74), Expect = 0.029
Identities = 16/113 (14%), Positives = 28/113 (24%), Gaps = 16/113 (14%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG-------VGFFTVHV 188
+FEK + + ++ F + F VG
Sbjct: 11 SFEK-TVERF--PYSVVKFDIASPYGEKH--EAFTAFSKSAHKATKDLLIATVGVKDYGE 65
Query: 189 HNEQGLARRLGV-GSQLPQIALLTDGRTSFFKEP---SFSVQKMVEFFRLKLP 237
+ L R V P I L + + P ++ + F P
Sbjct: 66 LENKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTP 118
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 30.4 bits (68), Expect = 0.094
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 209
++ +F S C C + + E + + + A G+ + +P IA+
Sbjct: 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVD-REKAIEYGLMA-VPAIAI 61
Query: 210 LTDGR 214
R
Sbjct: 62 NGVVR 66
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 31.1 bits (70), Expect = 0.12
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDEL 176
F K IPKS L+ F + + + Q FK+L +
Sbjct: 13 TFYK-VIPKS--KFVLVKFDTQYPYGEKQ--DEFKRLAENS 48
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 30.6 bits (68), Expect = 0.13
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 195
F+ + S P L+ F++ WC C + P+ ++ E + ++ +A
Sbjct: 10 TFKNVVLESS--VPVLVDFWAPWCGPCRIIAPVVDEIAGE-YKDKLKCVKLNTDESPNVA 66
Query: 196 RRLGVGSQ 203
G+ S
Sbjct: 67 SEYGIRSI 74
>d1yqea1 c.56.7.1 (A:1-278) Hypothetical protein AF0625
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 278
Score = 32.2 bits (73), Expect = 0.15
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 90 SGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSY--- 146
S D+A +N +++ D F E F+ + F+ T ++I +
Sbjct: 7 SESDTAGQNIKDNLLTFAD--FEEKDVGEFKLYLSDEFYIAETKERLIYADHIDEKLAKY 64
Query: 147 TTPHLILFYS 156
ILF S
Sbjct: 65 IDFEEILFAS 74
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 30.3 bits (67), Expect = 0.16
Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 207
P ++ F++ WC C + P+ +L E S + + ++ G+A + + S +
Sbjct: 19 PVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAPGIATQYNIRSIPTVL 76
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 30.1 bits (67), Expect = 0.28
Identities = 9/76 (11%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Query: 132 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE 191
W ++ I +I F DW C++++ + + +++ V + V +
Sbjct: 8 HNGWQVDQA-ILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAV-IYLVDITEV 65
Query: 192 QGLARRLGVGSQLPQI 207
+ + +
Sbjct: 66 PDFNKMYELYDPCTVM 81
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 29.8 bits (66), Expect = 0.30
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 195
N+ + + + LI FY+ WC C + P +++L + V +
Sbjct: 11 NYNEIVLDDT--KDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN 68
Query: 196 RRLGVGSQLPQIALLTDGR 214
P I L G
Sbjct: 69 DVPDEIQGFPTIKLYPAGA 87
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 29.1 bits (64), Expect = 0.46
Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 2/88 (2%)
Query: 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLAR--RLGVGSQLPQ 206
C C + ++ E + L +P
Sbjct: 28 TATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPG 87
Query: 207 IALLTDGRTSFFKEPSFSVQKMVEFFRL 234
+TDG+ + + S S Q++ +F L
Sbjct: 88 FVHITDGQINVRCDSSMSAQEIKDFAGL 115
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 28.6 bits (63), Expect = 0.67
Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 195
+F+ + + L+ F+++WC C + PI ++ DE + +++ G A
Sbjct: 11 SFDTDVLKAD--GAILVDFWAEWCGPCKMIAPILDEIADE-YQGKLTVAKLNIDQNPGTA 67
Query: 196 RRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEF 231
+ G+ +P + L +G + K + S ++ EF
Sbjct: 68 PKYGIRG-IPTLLLFKNGEVAATKVGALSKGQLKEF 102
>d1qrva_ a.21.1.1 (A:) HMG-D {Drosophila melanogaster [TaxId: 7227]}
Length = 73
Score = 27.1 bits (60), Expect = 1.4
Identities = 6/43 (13%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 404 AFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKY 446
A+M + +E++ +WR K ++
Sbjct: 10 AYMLWLNSARESIKRENPGI-KVTEVAKRGGELWRAMKDKSEW 51
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 27.5 bits (60), Expect = 2.0
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 208
P ++ F + WC C + P+F+ L ++ V F V V +A G+ + +P
Sbjct: 26 PIVVDFTATWCGPCKMIAPLFETLSNDY-AGKVIFLKVDVDAVAAVAEAAGITA-MPTFH 83
Query: 209 LLTDGR 214
+ DG
Sbjct: 84 VYKDGV 89
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 27.4 bits (60), Expect = 2.1
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 120 EEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL 179
EE + H + T +FEK K ++ F + WC C + PIF +L +
Sbjct: 2 EEGQVIACHTVDTWKEHFEKG---KGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-- 56
Query: 180 GVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 214
V F V V + +A V + +P L DG+
Sbjct: 57 NVTFLKVDVDELKAVAEEWNVEA-MPTFIFLKDGK 90
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 28.0 bits (61), Expect = 2.2
Identities = 4/27 (14%), Positives = 6/27 (22%)
Query: 149 PHLILFYSDWCFACLQVEPIFKKLMDE 175
L++ WC C
Sbjct: 56 YRLLVAGEMWCPDCQINLAALDFAQRL 82
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 27.5 bits (60), Expect = 2.5
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 195
N ++ I L+L+Y+ WC C ++ P +++L D + + +
Sbjct: 21 NHDE--IVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYAN-ATSDVLIAKLDHTEND 77
Query: 196 RRLGVGSQLPQIALLTDGR 214
R V P I L G+
Sbjct: 78 VRGVVIEGYPTIVLYPGGK 96
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 26.8 bits (58), Expect = 3.1
Identities = 7/41 (17%), Positives = 14/41 (34%)
Query: 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN 190
+++F + C C + K E + G G +
Sbjct: 18 RILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVE 58
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 27.3 bits (60), Expect = 4.7
Identities = 14/79 (17%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 195
F + + T ++ Y D C + + L E V F + N
Sbjct: 109 QFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRASNTG-AG 165
Query: 196 RRLGVGSQLPQIALLTDGR 214
R LP + + G
Sbjct: 166 DRFSSDV-LPTLLVYKGGE 183
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 26.4 bits (57), Expect = 5.7
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 149 PHLILFYSDWCFACLQVEPIFKKLMDE 175
P +++ + WC AC ++P F + +
Sbjct: 27 PLMVIIHKSWCGACKALKPKFAESTEI 53
>d1n8ia_ c.1.13.1 (A:) Malate synthase G {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 726
Score = 27.2 bits (60), Expect = 6.1
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 28 PRTASLQEIRKNYKRLVVEWH---PDKNNDPTAQEKFLQ 63
P+ +L R + + +WH + D A +FL
Sbjct: 47 PQNQALLNARDELQAQIDKWHRRRVIEPIDMDAYRQFLT 85
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 25.5 bits (55), Expect = 7.4
Identities = 5/43 (11%), Positives = 9/43 (20%)
Query: 150 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ 192
+YS C C V + + +
Sbjct: 18 EFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNE 60
>d2fkia1 d.198.3.1 (A:1-118) Hypothetical protein YjbR {Escherichia
coli [TaxId: 562]}
Length = 118
Score = 25.6 bits (56), Expect = 7.6
Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 10/83 (12%)
Query: 397 RFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLLGDAVDD 456
+ ++ F V + V+ TSPE A + R + ++ L A
Sbjct: 28 QIKVEDVLFAMVKEVENRPAVSLKTSPEL--------AELLRQQHSDVRPSRHLNKA--H 77
Query: 457 WKDYNTTKDRLDAGLRSLVNDPY 479
W D+ + LV+ Y
Sbjct: 78 WSTVYLDGSLPDSQIYYLVDASY 100
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 25.5 bits (55), Expect = 8.1
Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 4/96 (4%)
Query: 136 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA 195
FE + P L+ F++ WC C + P+ + S + +
Sbjct: 11 EFESEVLKAE--QPVLVYFWASWCGPCQLMSPLINLAANTYSDRLK-VVKLEIDPNPTTV 67
Query: 196 RRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEF 231
++ V P + L+ + E S K++ F
Sbjct: 68 KKYKVEGV-PALRLVKGEQILDSTEGVISKDKLLSF 102
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 25.9 bits (56), Expect = 8.7
Identities = 6/44 (13%), Positives = 14/44 (31%)
Query: 149 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ 192
+I + FAC + + + F V+++
Sbjct: 44 WLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDS 87
>d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C
acetyltransferase CefG {Acremonium chrysogenum [TaxId:
5044]}
Length = 376
Score = 26.7 bits (58), Expect = 8.8
Identities = 16/123 (13%), Positives = 38/123 (30%), Gaps = 10/123 (8%)
Query: 58 QEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNF 117
E+F + + + + ++ GT G S + + + ++ F
Sbjct: 226 DERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSS----YLRYQAQKFAA 281
Query: 118 PFEEHDISLFHKLSTTHWNFEKNYIP-----KSYTTPHLIL-FYSDWCFACLQVEPIFKK 171
F+ + TH T P LI+ SD ++ + + +
Sbjct: 282 SFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRS 341
Query: 172 LMD 174
+ +
Sbjct: 342 IPN 344
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.138 0.416
Gapped
Lambda K H
0.267 0.0490 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,130,773
Number of extensions: 101696
Number of successful extensions: 277
Number of sequences better than 10.0: 1
Number of HSP's gapped: 267
Number of HSP's successfully gapped: 45
Length of query: 554
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 464
Effective length of database: 1,171,896
Effective search space: 543759744
Effective search space used: 543759744
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.5 bits)