BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16776
(214 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|116007798|ref|NP_001036597.1| CG3689, isoform C [Drosophila melanogaster]
gi|113194891|gb|ABI31246.1| CG3689, isoform C [Drosophila melanogaster]
Length = 237
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/201 (81%), Positives = 179/201 (89%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N T ++ L NR NLYPL+NYTF K+PLFEKD SVP+RFQRMR+EF++IGMRRSV
Sbjct: 31 NGTQKYTNQALTINRTINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSV 90
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVLLVHEHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLLS+TLGR+DGVKQEWI
Sbjct: 91 EGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQDGVKQEWI 150
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
VEDTIGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL E
Sbjct: 151 VEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFE 210
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDNSQGYGPIISSLPQALCR
Sbjct: 211 LYDNSQGYGPIISSLPQALCR 231
>gi|157105268|ref|XP_001648792.1| pre-mrna cleavage factor im, 25kD subunit [Aedes aegypti]
gi|157118316|ref|XP_001653167.1| pre-mrna cleavage factor im, 25kD subunit [Aedes aegypti]
gi|108880136|gb|EAT44361.1| AAEL004266-PA [Aedes aegypti]
gi|108883290|gb|EAT47515.1| AAEL001371-PA [Aedes aegypti]
Length = 230
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/208 (79%), Positives = 183/208 (87%), Gaps = 9/208 (4%)
Query: 16 TVNRTINLISK-----NLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEK 70
T T+N ISK ++ NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+K
Sbjct: 17 TSQGTLNDISKPQGNQSMTLNRTINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDK 76
Query: 71 IGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD 130
IGMRRSV+GVLLVHEHGLPHVL+LQLGTTFFKLPGGEL+ GEDE+EGLKRLL++TLGR+D
Sbjct: 77 IGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELSAGEDEVEGLKRLLTETLGRQD 136
Query: 131 GVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKL 186
GVKQ+WIVEDTIGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+ VPKNYKL
Sbjct: 137 GVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKL 196
Query: 187 VAAPLVELYDNSQGYGPIISSLPQALCR 214
VAAPL ELYDNSQGYGPIISSLPQALCR
Sbjct: 197 VAAPLFELYDNSQGYGPIISSLPQALCR 224
>gi|340716896|ref|XP_003396927.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Bombus terrestris]
gi|340716898|ref|XP_003396928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Bombus terrestris]
Length = 228
Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 159/194 (81%), Positives = 177/194 (91%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++++ NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLVH
Sbjct: 29 NQSVTINRTVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVH 88
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLL++T GR+DGVKQEW++EDTIGN
Sbjct: 89 EHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLTETFGRQDGVKQEWVIEDTIGN 148
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPYVP HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL ELYDNSQG
Sbjct: 149 WWRPNFEPPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQG 208
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ+LCR
Sbjct: 209 YGPIISSLPQSLCR 222
>gi|66499810|ref|XP_624522.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Apis mellifera]
gi|350396581|ref|XP_003484601.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Bombus impatiens]
gi|380019194|ref|XP_003693499.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Apis florea]
gi|383853072|ref|XP_003702048.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Megachile rotundata]
Length = 228
Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 159/194 (81%), Positives = 177/194 (91%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++++ NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLVH
Sbjct: 29 NQSVTINRTVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVH 88
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLL++T GR+DGVKQEW++EDTIGN
Sbjct: 89 EHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLTETFGRQDGVKQEWVIEDTIGN 148
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPYVP HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL ELYDNSQG
Sbjct: 149 WWRPNFEPPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQG 208
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ+LCR
Sbjct: 209 YGPIISSLPQSLCR 222
>gi|307193774|gb|EFN76452.1| Cleavage and polyadenylation specificity factor subunit 5
[Harpegnathos saltator]
Length = 228
Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 159/194 (81%), Positives = 177/194 (91%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++++ NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLVH
Sbjct: 29 NQSVTINRTVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVH 88
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLL++T GR+DGVKQEW++EDTIGN
Sbjct: 89 EHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLTETFGRQDGVKQEWVIEDTIGN 148
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPYVP HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL ELYDNSQG
Sbjct: 149 WWRPNFEPPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQG 208
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ+LCR
Sbjct: 209 YGPIISSLPQSLCR 222
>gi|332021628|gb|EGI61987.1| Cleavage and polyadenylation specificity factor subunit 5
[Acromyrmex echinatior]
Length = 228
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/194 (81%), Positives = 177/194 (91%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++++ NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLVH
Sbjct: 29 NQSVTINRTVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVH 88
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLL++T GR+DGVKQEW++EDTIGN
Sbjct: 89 EHGLPHVLLLQLGTTFFKLPGGELNTGEDEVEGLKRLLTETFGRQDGVKQEWVIEDTIGN 148
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPYVP HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL ELYDNSQG
Sbjct: 149 WWRPNFEPPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQG 208
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ+LCR
Sbjct: 209 YGPIISSLPQSLCR 222
>gi|307179524|gb|EFN67838.1| Cleavage and polyadenylation specificity factor subunit 5
[Camponotus floridanus]
Length = 222
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 173/188 (92%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLVHEHGLPH
Sbjct: 35 NRTVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPH 94
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQLGTTFFKLPGGELN GEDE+EGLKRLL++T GR+DGVKQEW++EDTIGNWWRPNF
Sbjct: 95 VLLLQLGTTFFKLPGGELNTGEDEVEGLKRLLTETFGRQDGVKQEWVIEDTIGNWWRPNF 154
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
EPPQYPYVP HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL ELYDNSQGYGPIIS
Sbjct: 155 EPPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYGPIIS 214
Query: 207 SLPQALCR 214
SLPQ+LCR
Sbjct: 215 SLPQSLCR 222
>gi|118778290|ref|XP_308558.3| AGAP007242-PA [Anopheles gambiae str. PEST]
gi|116132312|gb|EAA04203.3| AGAP007242-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/194 (81%), Positives = 178/194 (91%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++++ NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLVH
Sbjct: 32 NQSMTLNRTINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVH 91
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGEL+ GEDE++GLKRLL++TLGR+DGVKQ+WIVEDTIGN
Sbjct: 92 EHGLPHVLLLQLGTTFFKLPGGELSAGEDEVDGLKRLLTETLGRQDGVKQDWIVEDTIGN 151
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL ELYDNSQG
Sbjct: 152 WWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQG 211
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQALCR
Sbjct: 212 YGPIISSLPQALCR 225
>gi|345479668|ref|XP_003424005.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Nasonia vitripennis]
Length = 225
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 172/188 (91%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
NR NLYPL+NY F K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLVHEHGLPH
Sbjct: 32 NRTINLYPLTNYKFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPH 91
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VLMLQLGTTFFKLPGGELN GEDE+EGLKRLL++ LGR+DGVKQEW++EDTIGNWWRPNF
Sbjct: 92 VLMLQLGTTFFKLPGGELNAGEDEVEGLKRLLTEILGRQDGVKQEWLIEDTIGNWWRPNF 151
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
EPPQYPY+P HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL ELYDNSQGYGPIIS
Sbjct: 152 EPPQYPYIPPHITKPKEHKRLFLVQLQEKAVVAVPKNYKLVAAPLFELYDNSQGYGPIIS 211
Query: 207 SLPQALCR 214
SLPQALCR
Sbjct: 212 SLPQALCR 219
>gi|114051528|ref|NP_001040354.1| cleavage and polyadenylation specific factor 5 [Bombyx mori]
gi|95102614|gb|ABF51245.1| cleavage and polyadenylation specific factor 5 [Bombyx mori]
Length = 227
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/194 (81%), Positives = 175/194 (90%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
S NL NR NLYPL+NYTF K+PLFEKD+SVPARFQRMR+EF KIGMRRSV+GVLLVH
Sbjct: 28 SMNLTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGT FFKLPGGELN GEDEI+GLKRLL++TLGR+DGVKQEW++EDTIGN
Sbjct: 88 EHGLPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH+RLFLVQL +R VPKNYKLVAAPL ELYDN+QG
Sbjct: 148 WWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSL Q+LCR
Sbjct: 208 YGPIISSLSQSLCR 221
>gi|91093207|ref|XP_969509.1| PREDICTED: similar to CG3689 CG3689-PC [Tribolium castaneum]
Length = 228
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/188 (84%), Positives = 171/188 (90%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
NR NLYPL+NY F K+PLFEKD SVPARFQRMRDEFE+IGMRRSV+GVLLVHEHGLPH
Sbjct: 36 NRIINLYPLTNYIFGTKEPLFEKDPSVPARFQRMRDEFERIGMRRSVEGVLLVHEHGLPH 95
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQLGTTFFKLPGGELN GEDE+EGLKRLL++TLGR DGVKQ+W+VED IGNWWRPNF
Sbjct: 96 VLLLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLGRLDGVKQDWLVEDIIGNWWRPNF 155
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
EPPQYPY+P HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL ELYDNSQGYGPIIS
Sbjct: 156 EPPQYPYIPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYGPIIS 215
Query: 207 SLPQALCR 214
SLPQALCR
Sbjct: 216 SLPQALCR 223
>gi|427793241|gb|JAA62072.1| Putative mrna cleavage factor i subunit, partial [Rhipicephalus
pulchellus]
Length = 235
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/192 (80%), Positives = 174/192 (90%), Gaps = 4/192 (2%)
Query: 27 NLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEH 86
N NR NLYPL+NYTF K+ L+E+DSSVPARFQRMR+EFEKIGMRRSV+GVLLVHEH
Sbjct: 38 NFTLNRTVNLYPLTNYTFGTKEALYERDSSVPARFQRMREEFEKIGMRRSVEGVLLVHEH 97
Query: 87 GLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWW 146
GLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W++EDT+GNWW
Sbjct: 98 GLPHVLLLQLGTTFFKLPGGELNMGEDEVEGLKRLMTEILGRQDGVKQDWVIEDTVGNWW 157
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFEPPQYPYVP HIT PKEH+RL+LVQLPE+ VPKNYKLVAAPL ELYDN+QGYG
Sbjct: 158 RPNFEPPQYPYVPPHITKPKEHKRLYLVQLPEKALFAVPKNYKLVAAPLFELYDNAQGYG 217
Query: 203 PIISSLPQALCR 214
PIISSLPQAL R
Sbjct: 218 PIISSLPQALSR 229
>gi|346469369|gb|AEO34529.1| hypothetical protein [Amblyomma maculatum]
Length = 240
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/192 (80%), Positives = 174/192 (90%), Gaps = 4/192 (2%)
Query: 27 NLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEH 86
N NR NLYPL+NYTF K+ L+E+DSSVPARFQRMR+EFEKIGMRRSV+GVLLVHEH
Sbjct: 43 NFTLNRTVNLYPLTNYTFGTKEALYERDSSVPARFQRMREEFEKIGMRRSVEGVLLVHEH 102
Query: 87 GLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWW 146
GLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W++EDT+GNWW
Sbjct: 103 GLPHVLLLQLGTTFFKLPGGELNMGEDEVEGLKRLMTEILGRQDGVKQDWVIEDTVGNWW 162
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFEPPQYPYVP HIT PKEH+RL+LVQLPE+ VPKNYKLVAAPL ELYDN+QGYG
Sbjct: 163 RPNFEPPQYPYVPPHITKPKEHKRLYLVQLPEKALFAVPKNYKLVAAPLFELYDNAQGYG 222
Query: 203 PIISSLPQALCR 214
PIISSLPQAL R
Sbjct: 223 PIISSLPQALSR 234
>gi|242019781|ref|XP_002430337.1| Cleavage and polyadenylation specificity factor, putative
[Pediculus humanus corporis]
gi|212515461|gb|EEB17599.1| Cleavage and polyadenylation specificity factor, putative
[Pediculus humanus corporis]
Length = 235
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/212 (74%), Positives = 178/212 (83%), Gaps = 4/212 (1%)
Query: 7 YPPSNSTLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRD 66
+P NS+ + + L R NLYPL+NYTF K+PLFEKD SVPARFQRMRD
Sbjct: 18 WPRRNSSQNATFESKGFGPETLTLIRTVNLYPLTNYTFGSKEPLFEKDPSVPARFQRMRD 77
Query: 67 EFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTL 126
EFEKIGMRRSV+GVLLVHEHGLPHVL+LQLGTTFFKLPGGEL GEDE+EGL+RLL++TL
Sbjct: 78 EFEKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELRPGEDEVEGLRRLLTETL 137
Query: 127 GRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPK 182
GR+DGVKQEW++EDTIGNWWRPNFEPPQYPY+P H+T PKEH+RLFLVQL E+ VPK
Sbjct: 138 GRQDGVKQEWVIEDTIGNWWRPNFEPPQYPYIPPHVTKPKEHKRLFLVQLAEKALFAVPK 197
Query: 183 NYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
NYKLVAAPL ELYDN+ GYGPIISSLPQ LCR
Sbjct: 198 NYKLVAAPLFELYDNAHGYGPIISSLPQTLCR 229
>gi|156545052|ref|XP_001600794.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Nasonia vitripennis]
Length = 214
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 177/209 (84%), Gaps = 17/209 (8%)
Query: 10 SNSTLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFE 69
S+ + VT +TI + YPL+NY F K+PLFEKD SVPARFQRMRDEF+
Sbjct: 13 SSGSTVTGGKTITI-------------YPLTNYKFGTKEPLFEKDPSVPARFQRMRDEFD 59
Query: 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129
KIGMRRSV+GVLLVHEHGLPHVLMLQLGTTFFKLPGGELN GEDE+EGLKRLL++ LGR+
Sbjct: 60 KIGMRRSVEGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNAGEDEVEGLKRLLTEILGRQ 119
Query: 130 DGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYK 185
DGVKQEW++EDTIGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+ VPKNYK
Sbjct: 120 DGVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQEKAVVAVPKNYK 179
Query: 186 LVAAPLVELYDNSQGYGPIISSLPQALCR 214
LVAAPL ELYDNSQGYGPIISSLPQALCR
Sbjct: 180 LVAAPLFELYDNSQGYGPIISSLPQALCR 208
>gi|289741289|gb|ADD19392.1| mRNA cleavage factor I subunit [Glossina morsitans morsitans]
Length = 232
Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 176/201 (87%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N T S +L NR LYPL++YTF K+PLFEKD SVP+RFQRMR+EF++IGMRRSV
Sbjct: 26 NGTAKFPSPSLSINRTIKLYPLTDYTFGCKEPLFEKDPSVPSRFQRMREEFDRIGMRRSV 85
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVLLVHEHGLPHVL+LQLGTTFFKLPGGELN GED +EGLKRLL++TLGR+DG+KQEW+
Sbjct: 86 EGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDGVEGLKRLLTETLGRQDGIKQEWV 145
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
VED IGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+ VPKNYKLVAAPL E
Sbjct: 146 VEDIIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFE 205
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDNSQGYGPIISSLPQALCR
Sbjct: 206 LYDNSQGYGPIISSLPQALCR 226
>gi|405975730|gb|EKC40278.1| Cleavage and polyadenylation specificity factor subunit 5
[Crassostrea gigas]
Length = 220
Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 156/210 (74%), Positives = 178/210 (84%), Gaps = 4/210 (1%)
Query: 9 PSNSTLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEF 68
P + V+ + + + +R NLYPL+NYTF K+PL+EKDSSVPARFQRMRDEF
Sbjct: 11 PKGTNPVSYAAKYGITNPSPTLDRPINLYPLTNYTFGTKEPLYEKDSSVPARFQRMRDEF 70
Query: 69 EKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128
EKIGMRRSV+GVL+VHEHGLPHVL+LQLGTTFFKLPGGELN GED++EGLKRLL++TLGR
Sbjct: 71 EKIGMRRSVEGVLIVHEHGLPHVLLLQLGTTFFKLPGGELNSGEDQVEGLKRLLTETLGR 130
Query: 129 RDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNY 184
+DG EW+VEDTIGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQLPE+ VP+NY
Sbjct: 131 QDGGTMEWVVEDTIGNWWRPNFEPPQYPYIPAHITKPKEHKRLFLVQLPEKALFAVPRNY 190
Query: 185 KLVAAPLVELYDNSQGYGPIISSLPQALCR 214
KLVAAPL ELYDNS GYGPIISSLPQAL R
Sbjct: 191 KLVAAPLFELYDNSAGYGPIISSLPQALSR 220
>gi|391346207|ref|XP_003747370.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Metaseiulus occidentalis]
Length = 233
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/210 (75%), Positives = 176/210 (83%), Gaps = 17/210 (8%)
Query: 9 PSNSTLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEF 68
PSN T+NRT+NL YPL+NYTF K+ L+EKD SVPARFQRMR+EF
Sbjct: 31 PSNVLSFTLNRTVNL-------------YPLTNYTFGTKEALYEKDPSVPARFQRMREEF 77
Query: 69 EKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128
EKIGMRRSV+GVLLVHEHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+S+TLGR
Sbjct: 78 EKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMSETLGR 137
Query: 129 RDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNY 184
+DGVKQEW +EDT+GNWWRPNFEP QYPY+ HIT PKEH+RLFLVQLPE+ VPKNY
Sbjct: 138 QDGVKQEWTIEDTVGNWWRPNFEPAQYPYILPHITKPKEHKRLFLVQLPEKALFAVPKNY 197
Query: 185 KLVAAPLVELYDNSQGYGPIISSLPQALCR 214
KLVAAPL ELYDNSQGYGPIISSLPQ L R
Sbjct: 198 KLVAAPLFELYDNSQGYGPIISSLPQTLSR 227
>gi|312372821|gb|EFR20698.1| hypothetical protein AND_19658 [Anopheles darlingi]
Length = 530
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 178/218 (81%), Gaps = 28/218 (12%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV- 83
++++ NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLV
Sbjct: 32 NQSMTLNRTINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVS 91
Query: 84 -----------------------HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKR 120
HEHGLPHVL+LQLGTTFFKLPGGEL+ GEDE+EGLKR
Sbjct: 92 AVLQRESFANGGFIRFFPRRGQVHEHGLPHVLLLQLGTTFFKLPGGELSAGEDEVEGLKR 151
Query: 121 LLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER- 179
LL++TLGR+DGVKQ+WIVEDTIGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+
Sbjct: 152 LLTETLGRQDGVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKA 211
Query: 180 ---VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VPKNYKLVAAPL ELYDNSQGYGPIISSLPQALCR
Sbjct: 212 LFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCR 249
>gi|241730686|ref|XP_002413834.1| mRNA cleavage factor I subunit, putative [Ixodes scapularis]
gi|215507650|gb|EEC17142.1| mRNA cleavage factor I subunit, putative [Ixodes scapularis]
Length = 233
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 153/199 (76%), Positives = 176/199 (88%), Gaps = 6/199 (3%)
Query: 20 TINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDG 79
+ N++S L NR NLYPL+NYTF K+ +E+DSSVPARFQRMR+EFEK+GMRRSV+G
Sbjct: 31 STNVLSVTL--NRTVNLYPLTNYTFGTKEAQYERDSSVPARFQRMREEFEKMGMRRSVEG 88
Query: 80 VLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVE 139
VLLVHEHGLPHVL+LQLGTTFFKLPGGELN GEDE EGLKRL+++ LGR+DGVKQ+W++E
Sbjct: 89 VLLVHEHGLPHVLLLQLGTTFFKLPGGELNPGEDEAEGLKRLMTEVLGRQDGVKQDWLIE 148
Query: 140 DTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELY 195
DT+GNWWRPNFEPPQYPYVP HIT+PKEH+ L LVQLPE+ VPKNYKLVAAPL ELY
Sbjct: 149 DTVGNWWRPNFEPPQYPYVPPHITAPKEHKMLHLVQLPEKALFAVPKNYKLVAAPLFELY 208
Query: 196 DNSQGYGPIISSLPQALCR 214
DN+QGYGPIISSLPQAL R
Sbjct: 209 DNAQGYGPIISSLPQALSR 227
>gi|225709978|gb|ACO10835.1| Cleavage and polyadenylation specificity factor subunit 5 [Caligus
rogercresseyi]
Length = 227
Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 153/188 (81%), Positives = 167/188 (88%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
NR NLYPL+NYTF KDPLFEKD SVPARFQRMRDEFEKIGMRRSVDG+LLVHEHGLPH
Sbjct: 34 NRCANLYPLTNYTFGTKDPLFEKDPSVPARFQRMRDEFEKIGMRRSVDGILLVHEHGLPH 93
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQLGTTFFKLPGGEL GEDE++GL+RLL+DTLGR D V +WI+EDTIGNWWRPNF
Sbjct: 94 VLLLQLGTTFFKLPGGELQPGEDEVQGLQRLLTDTLGRPDSVPTQWIIEDTIGNWWRPNF 153
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
EP QYPY+P HIT PKEHR+LF VQLPE+ VP+NYKLVAAPL ELYDNSQGYGPIIS
Sbjct: 154 EPAQYPYIPPHITKPKEHRKLFFVQLPEKSYFAVPRNYKLVAAPLFELYDNSQGYGPIIS 213
Query: 207 SLPQALCR 214
SLPQA+ R
Sbjct: 214 SLPQAMGR 221
>gi|328716665|ref|XP_001944073.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Acyrthosiphon pisum]
Length = 232
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/188 (80%), Positives = 168/188 (89%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
NR NLYPLSNY F K+PLFEKD SVPARFQRMRDEFEKIGMRRSV+GVL+VH+HGLPH
Sbjct: 39 NRHINLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPH 98
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQLGTTFFKLPGGELN EDE+EGLKRLL++TLGR+DGV+ EW VEDTIGNWWRPNF
Sbjct: 99 VLLLQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLGRQDGVQPEWTVEDTIGNWWRPNF 158
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
EPP YPY+P HIT PKEH+RLFLVQLP++ VPKNYKLVAAPL EL+DN+QGYG IIS
Sbjct: 159 EPPTYPYIPPHITKPKEHKRLFLVQLPDKALFAVPKNYKLVAAPLFELFDNAQGYGSIIS 218
Query: 207 SLPQALCR 214
SLPQAL R
Sbjct: 219 SLPQALGR 226
>gi|195167841|ref|XP_002024741.1| GL22627 [Drosophila persimilis]
gi|194108146|gb|EDW30189.1| GL22627 [Drosophila persimilis]
Length = 242
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 155/204 (75%), Positives = 171/204 (83%), Gaps = 14/204 (6%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++ L NR NLYPL+NYTF K+PLFEKD SVP+RFQRMR+EF++IGMRRSV+GVLLVH
Sbjct: 33 NQALTINRTVNLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVH 92
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE++GLKRLLS+TLGR+DGVKQEWIVEDTIGN
Sbjct: 93 EHGLPHVLLLQLGTTFFKLPGGELNAGEDEVDGLKRLLSETLGRQDGVKQEWIVEDTIGN 152
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE--------------RVPKNYKLVAAP 190
WWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E R LVAAP
Sbjct: 153 WWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKGYGQERQLRCTLSRSISAVLLVAAP 212
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDNSQGYGPIISSLPQALCR
Sbjct: 213 LFELYDNSQGYGPIISSLPQALCR 236
>gi|321458629|gb|EFX69694.1| hypothetical protein DAPPUDRAFT_202691 [Daphnia pulex]
Length = 232
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 149/192 (77%), Positives = 172/192 (89%), Gaps = 4/192 (2%)
Query: 27 NLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEH 86
+L +R NLYPLSNYTF KDPLFE+D SVPARFQRMR+EF+K+GMRRSV+G+LLVHEH
Sbjct: 35 SLTLHRTINLYPLSNYTFGTKDPLFERDPSVPARFQRMREEFDKVGMRRSVEGILLVHEH 94
Query: 87 GLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWW 146
GLPHVL+LQLGTTFFKLPGGELN GED+IEGLKRLL++ LGR+DGV Q+W++ED++GNWW
Sbjct: 95 GLPHVLLLQLGTTFFKLPGGELNPGEDDIEGLKRLLTEILGRQDGVVQDWLIEDSVGNWW 154
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDNSQGYG
Sbjct: 155 RPNFEPPQYPYIPPHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYG 214
Query: 203 PIISSLPQALCR 214
PIISSLPQ + R
Sbjct: 215 PIISSLPQTMSR 226
>gi|225714416|gb|ACO13054.1| Cleavage and polyadenylation specificity factor subunit 5
[Lepeophtheirus salmonis]
Length = 223
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/199 (75%), Positives = 175/199 (87%), Gaps = 5/199 (2%)
Query: 21 INLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
++L++ +L NR NL+PL+NYTF KDPLFEKD SVPARFQRMRD+FEK+GMRRSV+GV
Sbjct: 19 VSLVNPSLTLNRSVNLFPLTNYTFGTKDPLFEKDPSVPARFQRMRDDFEKMGMRRSVEGV 78
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQE-WIVE 139
LLVHEHGLPHVL+LQLGTTFFKLPGGEL GEDE++GLKR+++DTLGR + + WI+E
Sbjct: 79 LLVHEHGLPHVLLLQLGTTFFKLPGGELKLGEDEVQGLKRIMTDTLGRPEAKDPDTWIIE 138
Query: 140 DTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELY 195
DTIGNWWRPNFEPPQYPY+P HIT PKEHR+LFLVQLPER VP+NYKLVAAPL EL+
Sbjct: 139 DTIGNWWRPNFEPPQYPYIPPHITKPKEHRKLFLVQLPERSYFAVPRNYKLVAAPLFELF 198
Query: 196 DNSQGYGPIISSLPQALCR 214
DNSQGYGPIISSLPQA+ R
Sbjct: 199 DNSQGYGPIISSLPQAMGR 217
>gi|209734540|gb|ACI68139.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|303666153|gb|ADM16213.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 229
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 150/201 (74%), Positives = 175/201 (87%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ I+ SK L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EFEKIGMRR+V
Sbjct: 23 NKYISPPSKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRAV 82
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W+
Sbjct: 83 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLMTEILGRQDGVKQDWV 142
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D+IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 143 IDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 202
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 203 LYDNAPGYGPIISSLPQLLSR 223
>gi|41055411|ref|NP_957411.1| cleavage and polyadenylation specificity factor subunit 5 [Danio
rerio]
gi|82188244|sp|Q7T3C6.1|CPSF5_DANRE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|31418817|gb|AAH53172.1| Cleavage and polyadenylation specific factor 5 [Danio rerio]
gi|182891874|gb|AAI65427.1| Cpsf5 protein [Danio rerio]
Length = 228
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 173/201 (86%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ I +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EFEKIGMRR+V
Sbjct: 22 NKYITQATKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTV 81
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W+
Sbjct: 82 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVKQDWV 141
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 142 IDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 201
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 202 LYDNAPGYGPIISSLPQLLSR 222
>gi|221220044|gb|ACM08683.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 229
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 173/201 (86%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ I+ SK L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EFEKIGMRR+V
Sbjct: 23 NKYISPPSKPLALERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRAV 82
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ W+
Sbjct: 83 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLMTEILGRQDGVKQGWV 142
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D+IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 143 IDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 202
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISS PQ L R
Sbjct: 203 LYDNAPGYGPIISSFPQLLSR 223
>gi|318192410|ref|NP_001188025.1| cleavage and polyadenylation specificity factor subunit 5
[Ictalurus punctatus]
gi|308324627|gb|ADO29448.1| cleavage and polyadenylation specificity factor subunit 5
[Ictalurus punctatus]
Length = 228
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 174/201 (86%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ I+ +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EFEKIGMRR+V
Sbjct: 22 NKYISPPAKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTV 81
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W+
Sbjct: 82 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVKQDWV 141
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 142 IDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 201
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 202 LYDNAPGYGPIISSLPQLLSR 222
>gi|410913111|ref|XP_003970032.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Takifugu rubripes]
Length = 229
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/201 (73%), Positives = 173/201 (86%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ I +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V
Sbjct: 23 NKYIGGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTV 82
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W+
Sbjct: 83 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVKQDWV 142
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 143 IDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 202
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 203 LYDNAPGYGPIISSLPQLLSR 223
>gi|47230369|emb|CAF99562.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 147/201 (73%), Positives = 173/201 (86%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ I +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V
Sbjct: 23 NKYIGGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTV 82
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W+
Sbjct: 83 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVKQDWV 142
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 143 IDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 202
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 203 LYDNAPGYGPIISSLPQLLSR 223
>gi|392876462|gb|AFM87063.1| putative cleavage and polyadenylation specific factor 5
[Callorhinchus milii]
gi|392879578|gb|AFM88621.1| putative cleavage and polyadenylation specific factor 5
[Callorhinchus milii]
Length = 226
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 147/196 (75%), Positives = 171/196 (87%), Gaps = 4/196 (2%)
Query: 23 LISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLL 82
L +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EFEKIGMRR+V+GVL+
Sbjct: 25 LQAKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLI 84
Query: 83 VHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTI 142
VHEH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D I
Sbjct: 85 VHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCI 144
Query: 143 GNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNS 198
GNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+
Sbjct: 145 GNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 204
Query: 199 QGYGPIISSLPQALCR 214
GYGPIISSLPQ L R
Sbjct: 205 PGYGPIISSLPQLLSR 220
>gi|225716952|gb|ACO14322.1| Cleavage and polyadenylation specificity factor subunit 5 [Esox
lucius]
Length = 230
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 174/201 (86%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ ++ +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V
Sbjct: 24 NKYMSATAKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTV 83
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGEL+ GEDE++GLKRL+++ LGR+DGVKQ+W+
Sbjct: 84 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELSSGEDEVDGLKRLMTEILGRQDGVKQDWV 143
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 144 IDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 203
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 204 LYDNAPGYGPIISSLPQLLSR 224
>gi|432852419|ref|XP_004067238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oryzias latipes]
Length = 229
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 173/202 (85%), Gaps = 4/202 (1%)
Query: 17 VNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRS 76
N+ I+ +K L R NLYPL+NYTF K+PL+EKD SV ARFQRMR+EF+K+GMRR+
Sbjct: 22 ANKYISGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDGSVAARFQRMREEFDKMGMRRT 81
Query: 77 VDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEW 136
V+GVL+VHEH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W
Sbjct: 82 VEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVKQDW 141
Query: 137 IVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLV 192
+++D IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL
Sbjct: 142 VIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLF 201
Query: 193 ELYDNSQGYGPIISSLPQALCR 214
ELYDN+ GYGPIISSLPQ L R
Sbjct: 202 ELYDNAPGYGPIISSLPQLLSR 223
>gi|221222180|gb|ACM09751.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 175/201 (87%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ ++ +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V
Sbjct: 24 NKYMSAPAKPLSLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAV 83
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGEL+ GEDE++GLKRL+++ LGR+DGVKQ+W+
Sbjct: 84 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELSPGEDEVDGLKRLMTEILGRQDGVKQDWV 143
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D+IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 144 IDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 203
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 204 LYDNAPGYGPIISSLPQLLSR 224
>gi|225718018|gb|ACO14855.1| Cleavage and polyadenylation specificity factor subunit 5 [Caligus
clemensi]
Length = 230
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 175/201 (87%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ ++ +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V
Sbjct: 24 NKYMSAPAKPLSLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAV 83
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGEL+ GEDE++GLKRL+++ LGR+DGVKQ+W+
Sbjct: 84 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELSPGEDEVDGLKRLMTEILGRQDGVKQDWV 143
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D+IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 144 IDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 203
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 204 LYDNAPGYGPIISSLPQLLSR 224
>gi|345319194|ref|XP_001520801.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like, partial [Ornithorhynchus anatinus]
Length = 208
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 9 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 68
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D IGN
Sbjct: 69 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCIGN 128
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 129 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 188
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 189 YGPIISSLPQLLSR 202
>gi|348509546|ref|XP_003442309.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oreochromis niloticus]
Length = 227
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V+GVL+VH
Sbjct: 28 AKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGVKQ+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVKQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|119390446|pdb|2J8Q|A Chain A, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5) In Complex With A Sulphate
Ion.
gi|119390447|pdb|2J8Q|B Chain B, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5) In Complex With A Sulphate
Ion
Length = 227
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|109157347|pdb|2CL3|A Chain A, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5)
gi|301016059|pdb|3N9U|A Chain A, Crystal Structure Of The Complex Between The 25 Kda
Subunit And The 59 Kda Subunit (Rrm Domain) Of Human
Cleavage Factor Im
gi|301016060|pdb|3N9U|B Chain B, Crystal Structure Of The Complex Between The 25 Kda
Subunit And The 59 Kda Subunit (Rrm Domain) Of Human
Cleavage Factor Im
Length = 230
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 31 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 90
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 91 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 150
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 151 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 210
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 211 YGPIISSLPQLLSR 224
>gi|148235158|ref|NP_001086401.1| cleavage and polyadenylation specificity factor subunit 5 [Xenopus
laevis]
gi|82183583|sp|Q6DJE4.1|CPSF5_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|49522181|gb|AAH75235.1| MGC84447 protein [Xenopus laevis]
Length = 227
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|350539753|ref|NP_001232732.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|363738015|ref|XP_003641943.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Gallus gallus]
gi|197128967|gb|ACH45465.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128968|gb|ACH45466.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128969|gb|ACH45467.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128971|gb|ACH45469.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 227
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|62859619|ref|NP_001017262.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
gi|89267892|emb|CAJ83328.1| cleavage and polyadenylation specific factor 5 [Xenopus (Silurana)
tropicalis]
gi|161612284|gb|AAI55975.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
gi|165971084|gb|AAI58238.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
Length = 227
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 170/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|209734330|gb|ACI68034.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|223647296|gb|ACN10406.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|223673179|gb|ACN12771.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 174/201 (86%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ ++ +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V
Sbjct: 24 NKYMSAPAKPLSLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAV 83
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGEL GEDE++GLKRL+++ LGR+DGVKQ+W+
Sbjct: 84 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELCPGEDEVDGLKRLMTEILGRQDGVKQDWV 143
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D+IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 144 IDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 203
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 204 LYDNAPGYGPIISSLPQLLSR 224
>gi|387015292|gb|AFJ49765.1| Cleavage and polyadenylation specificity factor subunit 5 [Crotalus
adamanteus]
Length = 227
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 146/194 (75%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
SK L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 SKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|168177228|pdb|3BHO|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im With Ap4a
Length = 208
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 9 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 68
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 69 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 128
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 129 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 188
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 189 YGPIISSLPQLLSR 202
>gi|323463104|pdb|3Q2S|A Chain A, Crystal Structure Of Cfim68 RrmCFIM25 COMPLEX
gi|323463105|pdb|3Q2S|B Chain B, Crystal Structure Of Cfim68 RrmCFIM25 COMPLEX
gi|323463108|pdb|3Q2T|A Chain A, Crystal Structure Of Cfim68 RrmCFIM25RNA COMPLEX
gi|323463109|pdb|3Q2T|B Chain B, Crystal Structure Of Cfim68 RrmCFIM25RNA COMPLEX
Length = 207
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 8 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 67
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 68 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 127
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 128 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 187
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 188 YGPIISSLPQLLSR 201
>gi|61371857|gb|AAX43744.1| cleavage and polyadenylation specific factor 5 [synthetic
construct]
Length = 228
Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|351707659|gb|EHB10578.1| Cleavage and polyadenylation specificity factor subunit 5, partial
[Heterocephalus glaber]
Length = 222
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|5901926|ref|NP_008937.1| cleavage and polyadenylation specificity factor subunit 5 [Homo
sapiens]
gi|78369318|ref|NP_001030408.1| cleavage and polyadenylation specificity factor subunit 5 [Bos
taurus]
gi|197101936|ref|NP_001125721.1| cleavage and polyadenylation specificity factor subunit 5 [Pongo
abelii]
gi|114662616|ref|XP_510978.2| PREDICTED: uncharacterized protein LOC454100 [Pan troglodytes]
gi|296231113|ref|XP_002761011.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Callithrix jacchus]
gi|332227869|ref|XP_003263115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Nomascus leucogenys]
gi|402908439|ref|XP_003916948.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Papio anubis]
gi|403305942|ref|XP_003943506.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Saimiri boliviensis boliviensis]
gi|410050346|ref|XP_003952896.1| PREDICTED: uncharacterized protein LOC454100 [Pan troglodytes]
gi|426242385|ref|XP_004015053.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Ovis aries]
gi|74735411|sp|O43809.1|CPSF5_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Cleavage and polyadenylation
specificity factor 25 kDa subunit; Short=CFIm25;
Short=CPSF 25 kDa subunit; AltName: Full=Nucleoside
diphosphate-linked moiety X motif 21; Short=Nudix motif
21; AltName: Full=Pre-mRNA cleavage factor Im 25 kDa
subunit
gi|75041887|sp|Q5RAI8.1|CPSF5_PONAB RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|88911280|sp|Q3ZCA2.1|CPSF5_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|297343088|pdb|3MDG|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uuguau
gi|297343089|pdb|3MDG|B Chain B, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uuguau
gi|297343091|pdb|3MDI|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uguaaa
gi|297343092|pdb|3MDI|B Chain B, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uguaaa
gi|2887288|emb|CAA05026.1| pre-mRNA cleavage factor I 25 kDa subunit [Homo sapiens]
gi|12655103|gb|AAH01403.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Homo
sapiens]
gi|55728968|emb|CAH91222.1| hypothetical protein [Pongo abelii]
gi|73586913|gb|AAI02698.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Bos
taurus]
gi|90079113|dbj|BAE89236.1| unnamed protein product [Macaca fascicularis]
gi|119603265|gb|EAW82859.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21,
isoform CRA_a [Homo sapiens]
gi|119603266|gb|EAW82860.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21,
isoform CRA_a [Homo sapiens]
gi|123982654|gb|ABM83068.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
gi|123997321|gb|ABM86262.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
gi|296477965|tpg|DAA20080.1| TPA: cleavage and polyadenylation specificity factor subunit 5 [Bos
taurus]
gi|355710208|gb|EHH31672.1| Cleavage and polyadenylation specificity factor 25 kDa subunit
[Macaca mulatta]
gi|355756786|gb|EHH60394.1| Cleavage and polyadenylation specificity factor 25 kDa subunit
[Macaca fascicularis]
gi|380783941|gb|AFE63846.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|383411307|gb|AFH28867.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|384943114|gb|AFI35162.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|410227088|gb|JAA10763.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410267142|gb|JAA21537.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410289374|gb|JAA23287.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410342431|gb|JAA40162.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|440902614|gb|ELR53384.1| Cleavage and polyadenylation specificity factor subunit 5 [Bos
grunniens mutus]
Length = 227
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|397506630|ref|XP_003823828.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5 [Pan paniscus]
Length = 227
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|197128970|gb|ACH45468.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 227
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ PKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAAPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|355708272|gb|AES03219.1| nudix -type motif 21 [Mustela putorius furo]
Length = 225
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 27 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 86
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 87 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 146
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 147 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 206
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 207 YGPIISSLPQLLSR 220
>gi|13386106|ref|NP_080899.1| cleavage and polyadenylation specificity factor subunit 5 [Mus
musculus]
gi|84781636|ref|NP_001034093.1| cleavage and polyadenylation specificity factor subunit 5 [Rattus
norvegicus]
gi|73950369|ref|XP_535298.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Canis lupus familiaris]
gi|126296153|ref|XP_001364759.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Monodelphis domestica]
gi|194208617|ref|XP_001915145.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Equus caballus]
gi|291390150|ref|XP_002711573.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
gi|344289245|ref|XP_003416355.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Loxodonta africana]
gi|348572714|ref|XP_003472137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cavia porcellus]
gi|354482938|ref|XP_003503652.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cricetulus griseus]
gi|395505985|ref|XP_003757316.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Sarcophilus harrisii]
gi|395839444|ref|XP_003792599.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Otolemur garnettii]
gi|410983545|ref|XP_003998099.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Felis catus]
gi|81880378|sp|Q9CQF3.1|CPSF5_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|88911281|sp|Q4KM65.1|CPSF5_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|12847971|dbj|BAB27778.1| unnamed protein product [Mus musculus]
gi|12859636|dbj|BAB31718.1| unnamed protein product [Mus musculus]
gi|14198424|gb|AAH08270.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|60551046|gb|AAH90834.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|68534752|gb|AAH98748.1| Cleavage and polyadenylation specific factor 5 [Rattus norvegicus]
gi|74151031|dbj|BAE27645.1| unnamed protein product [Mus musculus]
gi|74227593|dbj|BAE35655.1| unnamed protein product [Mus musculus]
gi|148679165|gb|EDL11112.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|149032465|gb|EDL87356.1| rCG39081 [Rattus norvegicus]
gi|195539864|gb|AAI68149.1| Cleavage and polyadenylation specific factor 5 [Rattus norvegicus]
gi|417397455|gb|JAA45761.1| Putative mrna cleavage factor i subunit [Desmodus rotundus]
gi|431914138|gb|ELK15397.1| Cleavage and polyadenylation specificity factor subunit 5 [Pteropus
alecto]
Length = 227
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|346716318|ref|NP_001231176.1| cleavage and polyadenylation specificity factor subunit 5 [Sus
scrofa]
Length = 227
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|327287824|ref|XP_003228628.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Anolis carolinensis]
Length = 227
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
SK L R NLYPL+NYTF K+PL+EKDSSV ARF RMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 SKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFLRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|221219102|gb|ACM08212.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/201 (71%), Positives = 173/201 (86%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ ++ +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V
Sbjct: 24 NKYMSAPAKPLSLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAV 83
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGEL GEDE++GLKRL+++ LGR+DGVKQ+W+
Sbjct: 84 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELGPGEDEVDGLKRLMTEILGRQDGVKQDWV 143
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D+IGNWWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAA L E
Sbjct: 144 IDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAASLFE 203
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 204 LYDNAPGYGPIISSLPQLLSR 224
>gi|189053429|dbj|BAG35595.1| unnamed protein product [Homo sapiens]
Length = 227
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 168/194 (86%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+ +D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVTDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|74138675|dbj|BAE27154.1| unnamed protein product [Mus musculus]
Length = 227
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/194 (74%), Positives = 168/194 (86%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGE N GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGEFNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|31873228|emb|CAD97606.1| hypothetical protein [Homo sapiens]
gi|117644806|emb|CAL37869.1| hypothetical protein [synthetic construct]
gi|117645262|emb|CAL38097.1| hypothetical protein [synthetic construct]
gi|307684412|dbj|BAJ20246.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
Length = 227
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/194 (74%), Positives = 169/194 (87%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGEL+ GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELDPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQPLSR 221
>gi|310942946|pdb|3P5T|A Chain A, Cfim25-Cfim68 Complex
gi|310942947|pdb|3P5T|B Chain B, Cfim25-Cfim68 Complex
gi|310942948|pdb|3P5T|C Chain C, Cfim25-Cfim68 Complex
gi|310942949|pdb|3P5T|D Chain D, Cfim25-Cfim68 Complex
gi|310942950|pdb|3P5T|E Chain E, Cfim25-Cfim68 Complex
gi|310942951|pdb|3P5T|F Chain F, Cfim25-Cfim68 Complex
gi|310942962|pdb|3P6Y|A Chain A, Cf Im25-Cf Im68-Uguaa Complex
gi|310942963|pdb|3P6Y|B Chain B, Cf Im25-Cf Im68-Uguaa Complex
gi|310942966|pdb|3P6Y|E Chain E, Cf Im25-Cf Im68-Uguaa Complex
gi|310942967|pdb|3P6Y|F Chain F, Cf Im25-Cf Im68-Uguaa Complex
gi|310942970|pdb|3P6Y|I Chain I, Cf Im25-Cf Im68-Uguaa Complex
gi|310942971|pdb|3P6Y|J Chain J, Cf Im25-Cf Im68-Uguaa Complex
gi|310942974|pdb|3P6Y|M Chain M, Cf Im25-Cf Im68-Uguaa Complex
gi|310942975|pdb|3P6Y|N Chain N, Cf Im25-Cf Im68-Uguaa Complex
Length = 202
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 166/187 (88%), Gaps = 4/187 (2%)
Query: 32 RKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHV 91
R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VHEH LPHV
Sbjct: 2 RTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHV 61
Query: 92 LMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFE 151
L+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGNWWRPNFE
Sbjct: 62 LLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFE 121
Query: 152 PPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISS 207
PPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ GYGPIISS
Sbjct: 122 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISS 181
Query: 208 LPQALCR 214
LPQ L R
Sbjct: 182 LPQLLSR 188
>gi|197128966|gb|ACH45464.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 233
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 167/192 (86%), Gaps = 4/192 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQAL 212
YGPIISSLP
Sbjct: 208 YGPIISSLPSTF 219
>gi|48145955|emb|CAG33200.1| CPSF5 [Homo sapiens]
Length = 227
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 144/194 (74%), Positives = 168/194 (86%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EK SSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKGSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|198421202|ref|XP_002122804.1| PREDICTED: similar to pre-mrna cleavage factor im, 25kD subunit
[Ciona intestinalis]
Length = 239
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 143/198 (72%), Positives = 171/198 (86%), Gaps = 5/198 (2%)
Query: 22 NLISKNLQY-NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
N +K QY NR NLYPL+NYTF K+PL+E+DS+V ARFQRMR+EF+K G RRSV+GV
Sbjct: 36 NSTTKISQYINRGINLYPLTNYTFGTKEPLYERDSTVQARFQRMREEFDKAGQRRSVEGV 95
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVED 140
L+VHEHGLPHVL+LQLGTTFFKLPGGEL+ GE+E++GLKRL+++TLGR+DGV Q+W++ED
Sbjct: 96 LIVHEHGLPHVLLLQLGTTFFKLPGGELHNGENEVDGLKRLMTETLGRQDGVAQDWVIED 155
Query: 141 TIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYD 196
IGNWWRPNFEPP YPY+P HIT PKEH++LFLVQL E+ VP+NYKLVAAPL ELYD
Sbjct: 156 CIGNWWRPNFEPPLYPYIPAHITKPKEHKKLFLVQLGEKALFAVPRNYKLVAAPLFELYD 215
Query: 197 NSQGYGPIISSLPQALCR 214
NS GYGP+ISSLPQ L R
Sbjct: 216 NSNGYGPVISSLPQLLSR 233
>gi|291226047|ref|XP_002733010.1| PREDICTED: cleavage and polyadenylation specific factor 5-like
[Saccoglossus kowalevskii]
Length = 226
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 170/204 (83%), Gaps = 4/204 (1%)
Query: 15 VTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMR 74
VT N+ + R +LYPL+NYTF KDPL+EKD+SV ARFQRMR+EF+K+G R
Sbjct: 17 VTYNQRYATAGSTMNAERAISLYPLTNYTFGTKDPLYEKDASVAARFQRMREEFDKMGTR 76
Query: 75 RSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ 134
R+V+GVL+VHEHGLPHVL+LQLGTTFFKLPGGEL GEDE++GLKRLL++ LGR+DG++Q
Sbjct: 77 RTVEGVLIVHEHGLPHVLLLQLGTTFFKLPGGELAPGEDEVDGLKRLLTEILGRQDGIQQ 136
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W+ ED IGNW+RPNFEPPQYPYVP HIT PKEH+RL+LVQL E+ VP+NYKLVAAP
Sbjct: 137 DWMTEDVIGNWYRPNFEPPQYPYVPAHITKPKEHKRLYLVQLGEKALFAVPRNYKLVAAP 196
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ GYGPIISSLPQ L R
Sbjct: 197 LFELYDNAPGYGPIISSLPQLLSR 220
>gi|109128665|ref|XP_001096261.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Macaca mulatta]
Length = 228
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 140/182 (76%), Positives = 163/182 (89%), Gaps = 4/182 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VHEH LPHVL+LQL
Sbjct: 41 YPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQL 100
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYP 156
GTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGNWWRPNFEPPQYP
Sbjct: 101 GTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYP 160
Query: 157 YVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQAL 212
Y+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ GYGPIISSLPQ L
Sbjct: 161 YIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLL 220
Query: 213 CR 214
R
Sbjct: 221 SR 222
>gi|345778528|ref|XP_003431738.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Canis lupus familiaris]
Length = 234
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/187 (75%), Positives = 165/187 (88%), Gaps = 4/187 (2%)
Query: 32 RKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHV 91
R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VHEH LPHV
Sbjct: 42 RTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHQLPHV 101
Query: 92 LMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFE 151
L+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGNWWRPNFE
Sbjct: 102 LLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFE 161
Query: 152 PPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISS 207
PQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ GYGPIISS
Sbjct: 162 HPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISS 221
Query: 208 LPQALCR 214
LPQ L R
Sbjct: 222 LPQLLSR 228
>gi|168177225|pdb|3BAP|A Chain A, Crystal Structure Of The 25 Kda Subunit Of Human Cleavage
Factor Im
Length = 227
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/194 (73%), Positives = 166/194 (85%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQR R+EF+KIG RR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRXREEFDKIGXRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL ++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLXTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|291394738|ref|XP_002713823.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
Length = 227
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/194 (73%), Positives = 166/194 (85%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQ MR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQCMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLG TFFKLPGGELN GEDE+EGLKRL+++ LG +DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGMTFFKLPGGELNPGEDEVEGLKRLMTEILGHQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|72008807|ref|XP_784907.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Strongylocentrotus purpuratus]
Length = 227
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 137/194 (70%), Positives = 165/194 (85%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+ + R LYPL+NYTF K+PL+EKDSSVPARFQRM+DEF+K+G RRSV+GVL+VH
Sbjct: 28 TAGVHRERTAILYPLTNYTFGTKEPLYEKDSSVPARFQRMKDEFQKMGTRRSVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGEL GEDE++GLKRL+++ LGR+DGV+Q+W+VED I N
Sbjct: 88 EHDLPHVLLLQLGTTFFKLPGGELKAGEDEMDGLKRLMTEILGRQDGVQQDWMVEDIIAN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
W+RPNFEPPQYPY+P HIT PKEH++L+ VQL E+ VP+NYKLVAAPL ELYDNS G
Sbjct: 148 WYRPNFEPPQYPYIPAHITKPKEHKKLYFVQLAEKALFAVPRNYKLVAAPLFELYDNSPG 207
Query: 201 YGPIISSLPQALCR 214
YGP+ISSLPQ L R
Sbjct: 208 YGPVISSLPQLLSR 221
>gi|393908210|gb|EFO24259.2| cleavage and polyadenylation specificity factor subunit 5 [Loa loa]
Length = 230
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 140/188 (74%), Positives = 160/188 (85%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
+R NLYPL+NYTF KDP E+D SV ARFQRMR+E+EKIGMRRSV+GVLLVHEH LPH
Sbjct: 36 DRAINLYPLTNYTFGTKDPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLVHEHSLPH 95
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQ+GTTFFKLPGGELN GEDE+EGLKRLL++TLGR+DG K W +ED IGNWWRPNF
Sbjct: 96 VLLLQIGTTFFKLPGGELNPGEDEVEGLKRLLTETLGRQDGAKDLWTIEDVIGNWWRPNF 155
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
+PP+YPY+P H+T PKE +LFLVQLPER VPKNYKLVAAPL ELYDNS GYG +I+
Sbjct: 156 DPPRYPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDNSTGYGNLIA 215
Query: 207 SLPQALCR 214
SLPQ L R
Sbjct: 216 SLPQVLSR 223
>gi|170584698|ref|XP_001897131.1| Pre-mrna cleavage factor, identical [Brugia malayi]
gi|24370468|emb|CAC70149.1| putative pre-mrna cleavage factor [Brugia malayi]
gi|158595461|gb|EDP34014.1| Pre-mrna cleavage factor, identical [Brugia malayi]
Length = 230
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/188 (74%), Positives = 160/188 (85%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
+R NLYPL+NYTF KDP E+D SV ARFQRMR+E+EKIGMRRSV+GVLLVHEH LPH
Sbjct: 36 DRAINLYPLTNYTFGTKDPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLVHEHSLPH 95
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQ+GTTFFKLPGGELN GEDE+EGLKRLL++TLGR+DG K W +ED IGNWWRPNF
Sbjct: 96 VLLLQIGTTFFKLPGGELNPGEDEVEGLKRLLTETLGRQDGAKDLWTIEDVIGNWWRPNF 155
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
+PP+YPY+P H+T PKE +LFLVQLPER VPKNYKLVAAPL ELYDNS GYG +I+
Sbjct: 156 DPPRYPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDNSTGYGNLIA 215
Query: 207 SLPQALCR 214
SLPQ L R
Sbjct: 216 SLPQVLSR 223
>gi|324508134|gb|ADY43438.1| Cleavage and polyadenylation specificity factor subunit 5 [Ascaris
suum]
Length = 229
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 171/214 (79%), Gaps = 9/214 (4%)
Query: 9 PSNSTLVTVNRTINLISK----NLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRM 64
P+ S T N T N + K N +R +LYPL++YTF K+P E+D SV ARFQRM
Sbjct: 10 PTASKPQTGNAT-NTVKKYSEANGSTDRAISLYPLTSYTFGTKEPQAERDHSVQARFQRM 68
Query: 65 RDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSD 124
R+E+EKIGMRRSV+GVLLVHEH LPHVL+LQ+GTTFFKLPGGELN GEDEI+GLKRLL++
Sbjct: 69 REEYEKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEIDGLKRLLTE 128
Query: 125 TLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----V 180
TLGR+DG K W +ED IGNWWRPNF+PP+YPY+P H+T PKE +LFLVQLPER V
Sbjct: 129 TLGRQDGTKDLWTIEDAIGNWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALFAV 188
Query: 181 PKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
PKNYKLVAAPL ELYDN+ GYGP+I+SLPQ L R
Sbjct: 189 PKNYKLVAAPLFELYDNAAGYGPLIASLPQTLSR 222
>gi|432101736|gb|ELK29740.1| Cleavage and polyadenylation specificity factor subunit 5 [Myotis
davidii]
Length = 195
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 139/184 (75%), Positives = 161/184 (87%), Gaps = 4/184 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VHEH LPHVL+L
Sbjct: 6 NLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLL 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
QLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGNWWRPNFEPPQ
Sbjct: 66 QLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQ 125
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ GYGPIISSLPQ
Sbjct: 126 VSVHPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQ 185
Query: 211 ALCR 214
L R
Sbjct: 186 LLSR 189
>gi|291388431|ref|XP_002710785.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
Length = 227
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/194 (71%), Positives = 164/194 (84%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARF RM++EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLQRTINLYPLTNYTFGTKEPLYEKDSSVAARFLRMQEEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE EGLK L+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEGEGLKHLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WRPNFEPPQYPY+P HI PK H++LFLVQL E+ VPKNYKLVAAPL+ELYDN+ G
Sbjct: 148 CWRPNFEPPQYPYIPAHIAKPKAHKKLFLVQLQEKALFAVPKNYKLVAAPLIELYDNAPG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLPQ L R
Sbjct: 208 YGPIISSLPQLLSR 221
>gi|443730241|gb|ELU15845.1| hypothetical protein CAPTEDRAFT_219560 [Capitella teleta]
Length = 195
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 154/182 (84%), Gaps = 4/182 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+ L+EKD+SV RF+RMR EF GMRR+ +GVL+VHEHGLPHVL+LQL
Sbjct: 8 YPLTNYTFGTKEALYEKDASVQERFKRMRQEFADNGMRRTAEGVLIVHEHGLPHVLLLQL 67
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYP 156
GTTFFKLPGGEL GED+ EGLKRLL++ LGR+D +W +EDTIGNWWRPNFEPPQYP
Sbjct: 68 GTTFFKLPGGELKNGEDQTEGLKRLLTEMLGRQDQAPTDWTIEDTIGNWWRPNFEPPQYP 127
Query: 157 YVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQAL 212
Y+P HIT PKEH+RLFLVQLPE+ VP+NYKLVAAPL ELYDNS GYGPIISSLPQAL
Sbjct: 128 YIPAHITKPKEHKRLFLVQLPEKALFAVPRNYKLVAAPLFELYDNSAGYGPIISSLPQAL 187
Query: 213 CR 214
R
Sbjct: 188 SR 189
>gi|334362315|gb|AEG78357.1| cleavage and polyadenylation specific factor 5-like protein
[Epinephelus coioides]
Length = 182
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 134/176 (76%), Positives = 158/176 (89%), Gaps = 4/176 (2%)
Query: 43 TFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFK 102
TF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V+GVL+VHEH LPHVL+LQLGTTFFK
Sbjct: 1 TFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFK 60
Query: 103 LPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHI 162
LPGGEL+ GEDE+EGLKRL+++ LGR+DGVKQ+W+++D IGNWWRPNFEPPQYPY+P HI
Sbjct: 61 LPGGELSPGEDEVEGLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHI 120
Query: 163 TSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
T PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ GYGPIISSLPQ L R
Sbjct: 121 TKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSR 176
>gi|351710258|gb|EHB13177.1| Cleavage and polyadenylation specificity factor subunit 5
[Heterocephalus glaber]
Length = 227
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/194 (69%), Positives = 162/194 (83%), Gaps = 4/194 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EK SSV ARFQ MR+EF+KIG+RR+++GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKSSSVAARFQHMREEFDKIGIRRTIEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LP VL+LQLGTTFFKLPGGELN EDE+EGLK L+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPRVLLLQLGTTFFKLPGGELNPREDEVEGLKCLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWR NFEP QYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ G
Sbjct: 148 WWRSNFEPLQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNASG 207
Query: 201 YGPIISSLPQALCR 214
YGPIISSLP+ L R
Sbjct: 208 YGPIISSLPKLLSR 221
>gi|449282555|gb|EMC89388.1| Cleavage and polyadenylation specificity factor subunit 5, partial
[Columba livia]
Length = 206
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 132/178 (74%), Positives = 157/178 (88%), Gaps = 4/178 (2%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV+Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVQQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNS 198
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|312074088|ref|XP_003139813.1| pre-mRNA cleavage factor [Loa loa]
Length = 241
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 151/180 (83%), Gaps = 4/180 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF KDP E+D SV ARFQRMR+E+EKIGMRRSV+GVLLVHEH LPHVL+LQ+
Sbjct: 41 YPLTNYTFGTKDPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQI 100
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYP 156
GTTFFKLPGGELN GEDE+EGLKRLL++TLGR+DG K W +ED IGNWWRPNF+PP+YP
Sbjct: 101 GTTFFKLPGGELNPGEDEVEGLKRLLTETLGRQDGAKDLWTIEDVIGNWWRPNFDPPRYP 160
Query: 157 YVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQAL 212
Y+P H+T PKE +LFLVQLPER VPKNYKLVAAPL ELYDNS GY I + +AL
Sbjct: 161 YIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDNSTGYDSISCTRHEAL 220
>gi|268567562|ref|XP_002640028.1| Hypothetical protein CBG12500 [Caenorhabditis briggsae]
Length = 227
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/189 (67%), Positives = 152/189 (80%), Gaps = 4/189 (2%)
Query: 30 YNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLP 89
+NR N+YPL+NYTF KD EKD SVP RF+RM+DE+E +GMRRSV+ VL+VHEH LP
Sbjct: 30 FNRTINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLP 89
Query: 90 HVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPN 149
H+L+LQ+GTTF+KLPGGEL GEDEI G+ RLL+DTLGR DG EW +ED IGNWWRPN
Sbjct: 90 HILLLQIGTTFYKLPGGELEIGEDEISGVTRLLNDTLGRTDGESNEWTIEDEIGNWWRPN 149
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
F+PP+YPY+P H+T PKEH +L LVQLP + VPKN+KLVAAPL ELYDN+ YGP+I
Sbjct: 150 FDPPRYPYIPAHVTKPKEHTKLLLVQLPAKSTFCVPKNFKLVAAPLFELYDNAAAYGPLI 209
Query: 206 SSLPQALCR 214
SSLP L R
Sbjct: 210 SSLPTTLSR 218
>gi|17507315|ref|NP_492334.1| Protein CFIM-1 [Caenorhabditis elegans]
gi|3877104|emb|CAB02106.1| Protein CFIM-1 [Caenorhabditis elegans]
Length = 227
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 152/189 (80%), Gaps = 4/189 (2%)
Query: 30 YNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLP 89
+NR N+YPL+NYTF KD EKD SVP RF+RM+DE+E +GMRRSV+ VL+VHEH LP
Sbjct: 30 FNRTINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVMGMRRSVEAVLIVHEHSLP 89
Query: 90 HVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPN 149
H+L+LQ+GTTF+KLPGGEL GEDEI G+ RLL++TLGR DG EW +ED IGNWWRPN
Sbjct: 90 HILLLQIGTTFYKLPGGELELGEDEISGVTRLLNETLGRTDGETNEWTIEDEIGNWWRPN 149
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
F+PP+YPY+P H+T PKEH +L LVQLP + VPKN+KLVAAPL ELYDN+ YGP+I
Sbjct: 150 FDPPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDNAAAYGPLI 209
Query: 206 SSLPQALCR 214
SSLP L R
Sbjct: 210 SSLPTTLSR 218
>gi|358254013|dbj|GAA54051.1| cleavage and polyadenylation specificity factor subunit 5
[Clonorchis sinensis]
Length = 215
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/184 (71%), Positives = 155/184 (84%), Gaps = 5/184 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
LYPL +Y+F KDP +E+D SVPARFQR++++F+K GMRRSV+GVLLVHEH LPHVL+L
Sbjct: 26 TLYPLKSYSFGTKDPNYERDRSVPARFQRLQEDFDKYGMRRSVEGVLLVHEHNLPHVLLL 85
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
QLGT FFKLPGGELN GE+E+EGLKRLLS+ LGR DGV W+ ED IGNWWRPNFEPP+
Sbjct: 86 QLGT-FFKLPGGELNPGEEELEGLKRLLSEMLGRTDGVPVGWVPEDCIGNWWRPNFEPPR 144
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY+P H+T PKEH RLFL+QLPE+ VP NYKLVAAPL EL+DN++ YGPIISSLPQ
Sbjct: 145 YPYIPAHVTKPKEHTRLFLMQLPEKTLFAVPSNYKLVAAPLFELFDNARAYGPIISSLPQ 204
Query: 211 ALCR 214
L R
Sbjct: 205 VLSR 208
>gi|339245685|ref|XP_003374476.1| cleavage and polyadenylation specificity factor subunit 5
[Trichinella spiralis]
gi|316972263|gb|EFV55946.1| cleavage and polyadenylation specificity factor subunit 5
[Trichinella spiralis]
Length = 221
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/196 (66%), Positives = 156/196 (79%), Gaps = 4/196 (2%)
Query: 23 LISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLL 82
L S + NR N+YPL+NYTF K E+D +V ARF RMR+E+EK GMRRSVDGVL+
Sbjct: 20 LTSTSDTLNRTVNVYPLTNYTFGSKSAQQERDQTVQARFTRMRNEYEKHGMRRSVDGVLI 79
Query: 83 VHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTI 142
VHEH LPHVL+LQLG+TFF+LPGGEL GEDE+EGLKRLL+D LGR DG + W++EDT+
Sbjct: 80 VHEHNLPHVLLLQLGSTFFRLPGGELEPGEDEVEGLKRLLTDCLGREDGEQTPWVIEDTL 139
Query: 143 GNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNS 198
NWWRPNFEP +YPY+ H+ PKEH ++ LVQLPE+ VP+NYKLVAAP+ ELYDNS
Sbjct: 140 SNWWRPNFEPARYPYLCTHVCKPKEHIKMLLVQLPEKALFAVPRNYKLVAAPIFELYDNS 199
Query: 199 QGYGPIISSLPQALCR 214
GYGP+ISSLPQAL R
Sbjct: 200 AGYGPLISSLPQALSR 215
>gi|341876875|gb|EGT32810.1| hypothetical protein CAEBREN_19310 [Caenorhabditis brenneri]
gi|341898707|gb|EGT54642.1| hypothetical protein CAEBREN_25048 [Caenorhabditis brenneri]
Length = 227
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 125/189 (66%), Positives = 152/189 (80%), Gaps = 4/189 (2%)
Query: 30 YNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLP 89
+NR N+YPL+NYTF KD EKD SVP RF+RM+DE+E +GMRRSV+ VL+VHEH LP
Sbjct: 30 FNRTINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLP 89
Query: 90 HVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPN 149
H+L+LQ+GTTF+KLPGGEL GEDE+ G+ RLL++TLGR DG EW +ED IGNWWRPN
Sbjct: 90 HILLLQIGTTFYKLPGGELEIGEDEVSGVTRLLNETLGRTDGEPNEWTIEDEIGNWWRPN 149
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
F+PP+YPY+P H+T PKEH +L LVQLP + VPKN+KLVAAPL ELYDN+ YGP+I
Sbjct: 150 FDPPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDNASAYGPLI 209
Query: 206 SSLPQALCR 214
SSLP L R
Sbjct: 210 SSLPTTLSR 218
>gi|21355361|ref|NP_648308.1| CG3689, isoform B [Drosophila melanogaster]
gi|194867856|ref|XP_001972161.1| GG15373 [Drosophila erecta]
gi|195326297|ref|XP_002029866.1| GM25145 [Drosophila sechellia]
gi|195490860|ref|XP_002093317.1| GE20835 [Drosophila yakuba]
gi|195589025|ref|XP_002084257.1| GD14179 [Drosophila simulans]
gi|17862918|gb|AAL39936.1| SD03330p [Drosophila melanogaster]
gi|23093817|gb|AAF50278.2| CG3689, isoform B [Drosophila melanogaster]
gi|190653944|gb|EDV51187.1| GG15373 [Drosophila erecta]
gi|194118809|gb|EDW40852.1| GM25145 [Drosophila sechellia]
gi|194179418|gb|EDW93029.1| GE20835 [Drosophila yakuba]
gi|194196266|gb|EDX09842.1| GD14179 [Drosophila simulans]
gi|220946996|gb|ACL86041.1| CG3689-PB [synthetic construct]
gi|220956536|gb|ACL90811.1| CG3689-PB [synthetic construct]
Length = 203
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/162 (79%), Positives = 145/162 (89%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N T ++ L NR NLYPL+NYTF K+PLFEKD SVP+RFQRMR+EF++IGMRRSV
Sbjct: 31 NGTQKYTNQALTINRTINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSV 90
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVLLVHEHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLLS+TLGR+DGVKQEWI
Sbjct: 91 EGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQDGVKQEWI 150
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER 179
VEDTIGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+
Sbjct: 151 VEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEK 192
>gi|308499815|ref|XP_003112093.1| CRE-CFIM-1 protein [Caenorhabditis remanei]
gi|308268574|gb|EFP12527.1| CRE-CFIM-1 protein [Caenorhabditis remanei]
Length = 227
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 152/189 (80%), Gaps = 4/189 (2%)
Query: 30 YNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLP 89
+NR N+YPL+NYTF K+ EKD SVP RF+RM+DE+E +GMRRSV+ VL+VHEH LP
Sbjct: 30 FNRTINVYPLTNYTFGTKEAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLP 89
Query: 90 HVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPN 149
H+L+LQ+GTTF+KLPGGEL GEDE+ G+ RLL++TLGR DG EW +ED IGNWWRPN
Sbjct: 90 HILLLQIGTTFYKLPGGELEIGEDEVSGVTRLLNETLGRTDGESNEWTIEDEIGNWWRPN 149
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
F+PP+YPY+P H+T PKEH +L LVQLP + VPKN+KLVAAPL ELYDN+ YGP+I
Sbjct: 150 FDPPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDNAAAYGPLI 209
Query: 206 SSLPQALCR 214
SSLP L R
Sbjct: 210 SSLPTTLSR 218
>gi|238231501|ref|NP_001154164.1| cleavage and polyadenylation specificity factor subunit 5
[Oncorhynchus mykiss]
gi|225704506|gb|ACO08099.1| Cleavage and polyadenylation specificity factor 5 [Oncorhynchus
mykiss]
Length = 213
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/201 (66%), Positives = 160/201 (79%), Gaps = 21/201 (10%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
N+ ++ +K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+K+GMRR+V
Sbjct: 24 NKYMSAPAKPLSLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAV 83
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
+GVL+VHEH LPHVL+LQLGTTFFKLPGGE+ LGR+DGVKQ+W+
Sbjct: 84 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGEI-----------------LGRQDGVKQDWV 126
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
++D+IGNWWRPNFEPPQYP++P HIT PKEH++LFLVQL E+ VPKNYKLVAAPL E
Sbjct: 127 IDDSIGNWWRPNFEPPQYPHIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFE 186
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LYDN+ GYGPIISSLPQ L R
Sbjct: 187 LYDNAPGYGPIISSLPQLLSR 207
>gi|444725590|gb|ELW66151.1| Chromodomain-helicase-DNA-binding protein 9 [Tupaia chinensis]
Length = 1142
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 129/184 (70%), Positives = 153/184 (83%), Gaps = 9/184 (4%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
+LYPL+NYTF K+PL+EKDSSV ARFQ MR+EF KIGMRR+V+G+L+VHEH LPHVL+L
Sbjct: 97 SLYPLTNYTFGTKEPLYEKDSSVAARFQHMREEFYKIGMRRTVEGILIVHEHRLPHVLLL 156
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
QLGTTFFKLPGGELN GEDE+EGLK L+++ V +EW+++D IGNWWRPNFEPPQ
Sbjct: 157 QLGTTFFKLPGGELNPGEDEVEGLKHLMTEIW-----VNKEWVIDDCIGNWWRPNFEPPQ 211
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY P HIT PKE+++LFLVQL E+ VPKNYKLVAA L +LYDN+ GYG IISSLPQ
Sbjct: 212 YPYTPAHITKPKEYKKLFLVQLQEKALFIVPKNYKLVAAQLFKLYDNAPGYGSIISSLPQ 271
Query: 211 ALCR 214
L R
Sbjct: 272 LLSR 275
>gi|256070717|ref|XP_002571689.1| pre-mRNA cleavage factor im 25kD subunit [Schistosoma mansoni]
Length = 215
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 130/184 (70%), Positives = 155/184 (84%), Gaps = 5/184 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
LYPL +Y+F K+P +E+D SVPARFQR++++FEK GMRRSV+G+LLVHEH LPHVL+L
Sbjct: 26 TLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVLLL 85
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
QLGT FFKLPGGEL+ GE+EIEGLKRLLS+ LGR DG+ +WI ED IGNWWRPNFEPP+
Sbjct: 86 QLGT-FFKLPGGELHPGEEEIEGLKRLLSEMLGRTDGIPVDWIPEDCIGNWWRPNFEPPR 144
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY+P H+T PKE RLFL+QLPE+ VP NYKLVAAPL EL+DN++ YGPIISSLPQ
Sbjct: 145 YPYIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFDNARAYGPIISSLPQ 204
Query: 211 ALCR 214
L R
Sbjct: 205 VLSR 208
>gi|226471030|emb|CAX70596.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226471032|emb|CAX70597.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226487322|emb|CAX75526.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226487324|emb|CAX75527.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
Length = 215
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 130/184 (70%), Positives = 155/184 (84%), Gaps = 5/184 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
LYPL +Y+F K+P +E+D SVPARFQR++++FEK GMRRSV+G+LLVHEH LPHVL+L
Sbjct: 26 TLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVLLL 85
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
QLGT FFKLPGGEL+ GE+EIEGLKRLLS+ LGR DG+ +WI ED IGNWWRPNFEPP+
Sbjct: 86 QLGT-FFKLPGGELHPGEEEIEGLKRLLSEMLGRTDGIPVDWIPEDCIGNWWRPNFEPPR 144
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY+P H+T PKE RLFL+QLPE+ VP NYKLVAAPL EL+DN++ YGPIISSLPQ
Sbjct: 145 YPYIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFDNARAYGPIISSLPQ 204
Query: 211 ALCR 214
L R
Sbjct: 205 VLSR 208
>gi|357621873|gb|EHJ73547.1| cleavage and polyadenylation specific factor 5 [Danaus plexippus]
Length = 161
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/155 (83%), Positives = 143/155 (92%), Gaps = 4/155 (2%)
Query: 64 MRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLS 123
MR+EF KIGMRRSV+GVLLVHEHGLPHVL+LQLGT FFKLPGGELN GEDEIEGLKRLL+
Sbjct: 1 MREEFAKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIEGLKRLLT 60
Query: 124 DTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER---- 179
+TLGR+DGVKQEW++EDTIGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL +R
Sbjct: 61 ETLGRQDGVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFA 120
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VPKNYKLVAAPL ELYDN+QGYGPIISSL Q+LCR
Sbjct: 121 VPKNYKLVAAPLFELYDNAQGYGPIISSLSQSLCR 155
>gi|194751375|ref|XP_001958002.1| GF10694 [Drosophila ananassae]
gi|190625284|gb|EDV40808.1| GF10694 [Drosophila ananassae]
Length = 204
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/155 (81%), Positives = 143/155 (92%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++ L NR NLYPL+NYTF K+PLFEKD SVP+RFQRMR+EF++IGMRRSV+GVLLVH
Sbjct: 39 NQALTINRTINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVH 98
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLLS+TLGR+DGVKQEWIVEDTIGN
Sbjct: 99 EHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQDGVKQEWIVEDTIGN 158
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER 179
WWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+
Sbjct: 159 WWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEK 193
>gi|125980546|ref|XP_001354297.1| GA17613 [Drosophila pseudoobscura pseudoobscura]
gi|54642603|gb|EAL31350.1| GA17613 [Drosophila pseudoobscura pseudoobscura]
Length = 198
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/155 (81%), Positives = 143/155 (92%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++ L NR NLYPL+NYTF K+PLFEKD SVP+RFQRMR+EF++IGMRRSV+GVLLVH
Sbjct: 33 NQALTINRTVNLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVH 92
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE++GLKRLLS+TLGR+DGVKQEWIVEDTIGN
Sbjct: 93 EHGLPHVLLLQLGTTFFKLPGGELNAGEDEVDGLKRLLSETLGRQDGVKQEWIVEDTIGN 152
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER 179
WWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+
Sbjct: 153 WWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEK 187
>gi|195015476|ref|XP_001984210.1| GH15136 [Drosophila grimshawi]
gi|193897692|gb|EDV96558.1| GH15136 [Drosophila grimshawi]
Length = 203
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/155 (81%), Positives = 143/155 (92%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++ L NR NLYPL+NYTF K+PLFEKD SVP+RFQRMR+EF++IGMRRSV+GVLLVH
Sbjct: 38 NQALTINRTINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVH 97
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLLS+TLGR+DGVKQ+WIVEDTIGN
Sbjct: 98 EHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQDGVKQDWIVEDTIGN 157
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER 179
WWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+
Sbjct: 158 WWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEK 192
>gi|353233014|emb|CCD80369.1| putative pre-mRNA cleavage factor im, 25kD subunit [Schistosoma
mansoni]
Length = 208
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/182 (70%), Positives = 154/182 (84%), Gaps = 5/182 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL +Y+F K+P +E+D SVPARFQR++++FEK GMRRSV+G+LLVHEH LPHVL+LQL
Sbjct: 21 YPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVLLLQL 80
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYP 156
GT FFKLPGGEL+ GE+EIEGLKRLLS+ LGR DG+ +WI ED IGNWWRPNFEPP+YP
Sbjct: 81 GT-FFKLPGGELHPGEEEIEGLKRLLSEMLGRTDGIPVDWIPEDCIGNWWRPNFEPPRYP 139
Query: 157 YVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQAL 212
Y+P H+T PKE RLFL+QLPE+ VP NYKLVAAPL EL+DN++ YGPIISSLPQ L
Sbjct: 140 YIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFDNARAYGPIISSLPQVL 199
Query: 213 CR 214
R
Sbjct: 200 SR 201
>gi|195127095|ref|XP_002008004.1| GI12073 [Drosophila mojavensis]
gi|195376959|ref|XP_002047260.1| GJ13342 [Drosophila virilis]
gi|193919613|gb|EDW18480.1| GI12073 [Drosophila mojavensis]
gi|194154418|gb|EDW69602.1| GJ13342 [Drosophila virilis]
Length = 203
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/155 (81%), Positives = 143/155 (92%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++ L NR NLYPL+NYTF K+PLFEKD SVP+RFQRMR+EF++IGMRRSV+GVLLVH
Sbjct: 38 NQALTINRTINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVH 97
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLLS+TLGR+DGVKQ+WIVEDTIGN
Sbjct: 98 EHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQDGVKQDWIVEDTIGN 157
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER 179
WWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+
Sbjct: 158 WWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEK 192
>gi|195427341|ref|XP_002061735.1| GK17156 [Drosophila willistoni]
gi|194157820|gb|EDW72721.1| GK17156 [Drosophila willistoni]
Length = 205
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 128/170 (75%), Positives = 148/170 (87%), Gaps = 13/170 (7%)
Query: 10 SNSTLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFE 69
+N+ +T+NRTINL YPL+NYTF K+PLFEKD SVP+RFQRMR+EF+
Sbjct: 36 NNNQALTINRTINL-------------YPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFD 82
Query: 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129
+IGMRRSV+GVLLVHEHGLPHVL+LQLGTTFFKLPGGELN GEDE++GLKRLLS+TLGR+
Sbjct: 83 RIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVDGLKRLLSETLGRQ 142
Query: 130 DGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER 179
DGVKQ+WIVEDTIGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL E+
Sbjct: 143 DGVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEK 192
>gi|340383433|ref|XP_003390222.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Amphimedon queenslandica]
Length = 212
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 152/188 (80%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
+R LYPLSNYTF K+PL+EKD +V +RF R+++++EK GMRRSVDGV+LVHEH LPH
Sbjct: 19 DRLIKLYPLSNYTFGTKEPLYEKDRTVESRFLRLKEDYEKTGMRRSVDGVVLVHEHNLPH 78
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQLG+TFFKLP GE+ GE E EG++R+++DTLG+ D WIVED + NWWRPNF
Sbjct: 79 VLLLQLGSTFFKLPSGEVGPGESEAEGVQRIVNDTLGKEDTPLSTWIVEDVVANWWRPNF 138
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
E PQYPY+P H T PKEH++LFLVQLPER VP+NYKLVAAPL ELYDNS GYGP+I+
Sbjct: 139 ESPQYPYIPAHCTHPKEHKKLFLVQLPERTMFHVPRNYKLVAAPLFELYDNSAGYGPVIA 198
Query: 207 SLPQALCR 214
LPQ L R
Sbjct: 199 GLPQNLSR 206
>gi|340385713|ref|XP_003391353.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like, partial [Amphimedon queenslandica]
Length = 202
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 152/188 (80%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
+R LYPLSNYTF K+PL+EKD +V +RF R+++++EK GMRRSVDGV+LVHEH LPH
Sbjct: 9 DRLIKLYPLSNYTFGTKEPLYEKDRTVESRFLRLKEDYEKTGMRRSVDGVVLVHEHNLPH 68
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQLG+TFFKLP GE+ GE E EG++R+++DTLG+ D WIVED + NWWRPNF
Sbjct: 69 VLLLQLGSTFFKLPSGEVGPGESEAEGVQRIVNDTLGKEDTPLSTWIVEDVVANWWRPNF 128
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
E PQYPY+P H T PKEH++LFLVQLPER VP+NYKLVAAPL ELYDNS GYGP+I+
Sbjct: 129 ESPQYPYIPAHCTHPKEHKKLFLVQLPERTMFHVPRNYKLVAAPLFELYDNSAGYGPVIA 188
Query: 207 SLPQALCR 214
LPQ L R
Sbjct: 189 GLPQNLSR 196
>gi|193618040|ref|XP_001951264.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Acyrthosiphon pisum]
Length = 226
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/188 (68%), Positives = 153/188 (81%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
N NLYPLSNY F K+ LFEKD SV ARFQRMR+EF++IGMRRSV+GVL+VH +PH
Sbjct: 39 NSNINLYPLSNYKFGKKEHLFEKDPSVSARFQRMREEFKEIGMRRSVEGVLIVHIDWIPH 98
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+L+L T FFKLPGG+LN EDE+EGLKRLL++TLG ++GV+ +W VEDTIGNWWRPNF
Sbjct: 99 VLLLKLTTNFFKLPGGQLNPAEDEVEGLKRLLTETLGTQNGVQTDWTVEDTIGNWWRPNF 158
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YPY+P HIT PKEH+RLFLVQLP++ VPKNYK VA PL EL++N+QGYG I+S
Sbjct: 159 EFTTYPYIPAHITKPKEHKRLFLVQLPDKAMFSVPKNYKFVAVPLFELFENAQGYGTILS 218
Query: 207 SLPQALCR 214
SLP L R
Sbjct: 219 SLPIMLGR 226
>gi|270016492|gb|EFA12938.1| hypothetical protein TcasGA2_TC010485 [Tribolium castaneum]
Length = 187
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/149 (83%), Positives = 137/149 (91%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
NR NLYPL+NY F K+PLFEKD SVPARFQRMRDEFE+IGMRRSV+GVLLVHEHGLPH
Sbjct: 36 NRIINLYPLTNYIFGTKEPLFEKDPSVPARFQRMRDEFERIGMRRSVEGVLLVHEHGLPH 95
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQLGTTFFKLPGGELN GEDE+EGLKRLL++TLGR DGVKQ+W+VED IGNWWRPNF
Sbjct: 96 VLLLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLGRLDGVKQDWLVEDIIGNWWRPNF 155
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER 179
EPPQYPY+P HIT PKEH+RLFLVQL E+
Sbjct: 156 EPPQYPYIPPHITKPKEHKRLFLVQLQEK 184
>gi|221111867|ref|XP_002167860.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Hydra magnipapillata]
Length = 217
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 156/210 (74%), Gaps = 18/210 (8%)
Query: 10 SNSTLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFE 69
+N LV + RT+ L YPLSNYTF K+ L+EKDSSV ARFQRMRDEF+
Sbjct: 15 NNDALVPMERTVYL-------------YPLSNYTFGTKEALYEKDSSVQARFQRMRDEFD 61
Query: 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129
+GMRR+V+G L+VHEHGLPH+L+LQLGTTFFKLPGGEL GEDE EGLKR +S+ LG+
Sbjct: 62 TLGMRRNVEGCLIVHEHGLPHILLLQLGTTFFKLPGGELMAGEDESEGLKRSMSEMLGKP 121
Query: 130 DGVKQ-EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNY 184
DG W ED + NWWRPNFE P YPY+P HIT PKE +R+FL QLPE+ VP+NY
Sbjct: 122 DGTDPIAWQCEDVLSNWWRPNFETPIYPYIPAHITKPKEQKRIFLTQLPEKATFNVPRNY 181
Query: 185 KLVAAPLVELYDNSQGYGPIISSLPQALCR 214
KLVAAPL EL+DN QGYGP+IS+LP L +
Sbjct: 182 KLVAAPLFELFDNPQGYGPVISTLPCLLSK 211
>gi|328716667|ref|XP_003246005.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Acyrthosiphon pisum]
Length = 203
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 123/150 (82%), Positives = 137/150 (91%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
NR NLYPLSNY F K+PLFEKD SVPARFQRMRDEFEKIGMRRSV+GVL+VH+HGLPH
Sbjct: 39 NRHINLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPH 98
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQLGTTFFKLPGGELN EDE+EGLKRLL++TLGR+DGV+ EW VEDTIGNWWRPNF
Sbjct: 99 VLLLQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLGRQDGVQPEWTVEDTIGNWWRPNF 158
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPERV 180
EPP YPY+P HIT PKEH+RLFLVQLP++V
Sbjct: 159 EPPTYPYIPPHITKPKEHKRLFLVQLPDKV 188
>gi|332376679|gb|AEE63479.1| unknown [Dendroctonus ponderosae]
Length = 234
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/166 (76%), Positives = 138/166 (83%)
Query: 11 NSTLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEK 70
NST T + NR LYPL+NY F K+PLFE+D SVPARFQRMRDEFEK
Sbjct: 34 NSTPTTTVAEPQFPTTTGAINRIIKLYPLTNYIFGTKEPLFERDPSVPARFQRMRDEFEK 93
Query: 71 IGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD 130
IGMRRSV+GVLLVHEHGLPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRLL++TLGR D
Sbjct: 94 IGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLGRLD 153
Query: 131 GVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQL 176
GVKQEW VED IGNWWRPNFEPPQYPY+P HIT PKEH+RLFLVQL
Sbjct: 154 GVKQEWHVEDIIGNWWRPNFEPPQYPYIPSHITKPKEHKRLFLVQL 199
>gi|156401665|ref|XP_001639411.1| predicted protein [Nematostella vectensis]
gi|156226539|gb|EDO47348.1| predicted protein [Nematostella vectensis]
Length = 196
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/186 (69%), Positives = 153/186 (82%), Gaps = 8/186 (4%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+ L+EKDSSV ARFQRMR+E+EK GMR++V+GVL+VHEHGLPH+L+LQL
Sbjct: 11 YPLTNYTFGTKESLYEKDSSVQARFQRMREEYEKFGMRKTVEGVLIVHEHGLPHILLLQL 70
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGR-RDGVKQEWIVEDTIGNWWRPNFEPPQ- 154
GTTFFKLPGGEL GEDEI+GLKR +++ L R G + +W VED +GNWWRPNFE PQ
Sbjct: 71 GTTFFKLPGGELVPGEDEIDGLKRSMTEILSRPEHGPEPDWFVEDCLGNWWRPNFEAPQA 130
Query: 155 --YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSL 208
YPYVP HIT PKE R+LFLVQL E+ VP+NYKLVAAPL EL+DN+ GYGPII+SL
Sbjct: 131 RCYPYVPAHITKPKELRKLFLVQLGEKANFAVPRNYKLVAAPLFELFDNAPGYGPIIASL 190
Query: 209 PQALCR 214
PQ L R
Sbjct: 191 PQLLSR 196
>gi|324511146|gb|ADY44649.1| Cleavage and polyadenylation specificity factor subunit 5 [Ascaris
suum]
Length = 162
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 118/155 (76%), Positives = 136/155 (87%), Gaps = 4/155 (2%)
Query: 64 MRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLS 123
MR+E+EKIGMRRSV+GVLLVHEH LPHVL+LQ+GTTFFKLPGGELN GEDEI+GLKRLL+
Sbjct: 1 MREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEIDGLKRLLT 60
Query: 124 DTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER---- 179
+TLGR+DG K W +ED IGNWWRPNF+PP+YPY+P H+T PKE +LFLVQLPER
Sbjct: 61 ETLGRQDGTKDLWTIEDAIGNWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALFA 120
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VPKNYKLVAAPL ELYDN+ GYGP+I+SLPQ L R
Sbjct: 121 VPKNYKLVAAPLFELYDNAAGYGPLIASLPQTLSR 155
>gi|12848967|dbj|BAB28154.1| unnamed protein product [Mus musculus]
Length = 180
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 136/152 (89%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQL 176
WWRPNFEPPQYPY+P HIT PKEH++LFLVQL
Sbjct: 148 WWRPNFEPPQYPYIPAHITKPKEHKKLFLVQL 179
>gi|196012174|ref|XP_002115950.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190581726|gb|EDV21802.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 174
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 135/166 (81%), Gaps = 4/166 (2%)
Query: 53 KDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGE 112
K SV ARFQRM++E++ GMRR+V+GVL+VHEH LPH+L+LQLGTTFFKLP EL GE
Sbjct: 3 KTGSVAARFQRMKEEYQTKGMRRTVEGVLIVHEHRLPHILLLQLGTTFFKLPSTELAPGE 62
Query: 113 DEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLF 172
E+EGLKR L++ LGR DGV+QEW++ED + N+WRPNFE QYPYVP HIT PKE RRLF
Sbjct: 63 SEVEGLKRGLNEILGRNDGVEQEWLIEDLLCNYWRPNFEAAQYPYVPAHITKPKEQRRLF 122
Query: 173 LVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
LVQL E+ VPKNYKLVAAP+ ELYDN+ GYGP+I+SLP + R
Sbjct: 123 LVQLAEKALFAVPKNYKLVAAPVFELYDNASGYGPVIASLPILISR 168
>gi|443690873|gb|ELT92890.1| hypothetical protein CAPTEDRAFT_121873, partial [Capitella teleta]
Length = 179
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 107/155 (69%), Positives = 129/155 (83%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+ +L +R +LYPL+NYTF K+ L+EKD+SV RF+RMR EF GMRR+ +GVL+VH
Sbjct: 25 TSHLTLDRTISLYPLTNYTFGTKEALYEKDASVQERFKRMRQEFADNGMRRTAEGVLIVH 84
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EHGLPHVL+LQLGTTFFKLPGGEL GED+ EGLKRLL++ LGR+D +W +EDTIGN
Sbjct: 85 EHGLPHVLLLQLGTTFFKLPGGELKNGEDQTEGLKRLLTEMLGRQDQAPTDWTIEDTIGN 144
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER 179
WWRPNFEPPQYPY+P HIT PKEH+RLFLVQLPE+
Sbjct: 145 WWRPNFEPPQYPYIPAHITKPKEHKRLFLVQLPEK 179
>gi|320166492|gb|EFW43391.1| cleavage and polyadenylation specific factor 5 [Capsaspora
owczarzaki ATCC 30864]
Length = 198
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 141/184 (76%), Gaps = 5/184 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
NL+PL+NY+F IKDP +E+D SVP R QR++DEFE+ G RR+V+ VLLVHEH PH+L+L
Sbjct: 10 NLFPLTNYSFGIKDPQYERDPSVPTRMQRLKDEFEQYGSRRTVEAVLLVHEHNHPHLLLL 69
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
QLGTTFFKLPGGEL+ GEDEI G +R L+ TL +G W V + + NW+RP+++ Q
Sbjct: 70 QLGTTFFKLPGGELDIGEDEITGCQRWLTKTLA-VEGTSIPWNVCEIVCNWYRPSYDQNQ 128
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY+P H+T PKEHRR+F+V+LP VPKNYKLVAAPL EL+DN Q YGP+I+ LP
Sbjct: 129 YPYIPGHVTRPKEHRRVFVVELPPNAALAVPKNYKLVAAPLFELHDNPQTYGPVIAQLPA 188
Query: 211 ALCR 214
L R
Sbjct: 189 MLSR 192
>gi|440795771|gb|ELR16887.1| cleavage and polyadenylation specific factor 5, putative
[Acanthamoeba castellanii str. Neff]
Length = 217
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 141/208 (67%), Gaps = 18/208 (8%)
Query: 12 STLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKI 71
S +V+V RTINL Y L YTF K+ EKD+SV AR RM+D +E+
Sbjct: 17 SAVVSVQRTINL-------------YNLEKYTFGKKEAQMEKDTSVAARLLRMKDMYERE 63
Query: 72 GMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRD 130
GMRR+VD VLLVH+H PHVL+LQ+G TFFKLPGG L GE+E++GLKR L+ L
Sbjct: 64 GMRRTVDAVLLVHQHNHPHVLLLQIGNTFFKLPGGRLKPGENEVDGLKRKLTKKLAPNYS 123
Query: 131 GVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKL 186
+ +W V + + WWRPNFE QYPY+P HIT PKE +++FLVQLPER VPKN KL
Sbjct: 124 NYQLDWEVGELLCQWWRPNFETLQYPYIPPHITRPKECKKIFLVQLPERCVFAVPKNLKL 183
Query: 187 VAAPLVELYDNSQGYGPIISSLPQALCR 214
+A P+ +LYDN+ YGPIISSLPQ L R
Sbjct: 184 LAVPIFDLYDNASQYGPIISSLPQTLGR 211
>gi|403411800|emb|CCL98500.1| predicted protein [Fibroporia radiculosa]
Length = 204
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLKR L D L GV EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPTDSRQFNSSHGVDNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|336369060|gb|EGN97402.1| hypothetical protein SERLA73DRAFT_110607 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381841|gb|EGO22992.1| hypothetical protein SERLADRAFT_471586 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEI+GLKR L D L GV EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIDGLKRRLDDRLAPPTESRQFNASHGVDNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP+VP HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|390594815|gb|EIN04224.1| cleavage and polyadenylation specific factor 5 [Punctularia
strigosozonata HHB-11173 SS5]
Length = 204
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVAARLQRLQNNYEDWGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLKR L D L GV EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPTNSSQFNASHGVDNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|392559578|gb|EIW52762.1| cleavage and polyadenylation specific factor 5 [Trametes versicolor
FP-101664 SS1]
Length = 204
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLK+ L D L GV EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPTDSKQFNASHGVDNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|426382295|ref|XP_004057743.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Gorilla gorilla gorilla]
Length = 182
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 116/130 (89%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGN
Sbjct: 88 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 147
Query: 145 WWRPNFEPPQ 154
WWRPNFEPPQ
Sbjct: 148 WWRPNFEPPQ 157
>gi|395329711|gb|EJF62097.1| cleavage and polyadenylation specific factor 5 [Dichomitus squalens
LYAD-421 SS1]
Length = 204
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLK+ L D L GV EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPTDSRQFNSSHGVDNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|392588671|gb|EIW78003.1| cleavage and polyadenylation specificity factor 25 kDa subunit
[Coniophora puteana RWD-64-598 SS2]
Length = 204
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEI+GLKR L D L GV EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIDGLKRRLDDRLAPPPESRQFNASHGVDNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP+VP HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|449544756|gb|EMD35728.1| hypothetical protein CERSUDRAFT_115687 [Ceriporiopsis subvermispora
B]
Length = 204
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLKR L + L GV EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKRRLDERLAPPTNSSQFNASHGVDNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|444725613|gb|ELW66174.1| E3 ubiquitin-protein ligase AMFR [Tupaia chinensis]
Length = 861
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 93/119 (78%), Positives = 111/119 (93%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VHEH LPHVL+LQ
Sbjct: 148 LYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQ 207
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
LGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DGV Q+W+++D IGNWWRPNFEPPQ
Sbjct: 208 LGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQ 266
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 69/79 (87%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 70 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 129
Query: 85 EHGLPHVLMLQLGTTFFKL 103
EH LPHVL+LQLGTTFFKL
Sbjct: 130 EHRLPHVLLLQLGTTFFKL 148
>gi|169863260|ref|XP_001838252.1| cleavage and polyadenylation specific factor 5 [Coprinopsis cinerea
okayama7#130]
gi|116500725|gb|EAU83620.1| cleavage and polyadenylation specific factor 5 [Coprinopsis cinerea
okayama7#130]
Length = 204
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 132/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLK+ L D L + G+ +W + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPSNSQQFDQNHGIDNDWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP+VP HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|409075896|gb|EKM76271.1| hypothetical protein AGABI1DRAFT_108837 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192977|gb|EKV42912.1| hypothetical protein AGABI2DRAFT_188493 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+GVL+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDYGMRRTVEGVLVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLK+ L D L GV EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPSHSQQFDSTHGVDNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP+VP HIT PKE ++LFLVQ+PE+ VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|409041750|gb|EKM51235.1| hypothetical protein PHACADRAFT_263266 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+GVL+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLK+ L D L GV +W + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPQDSRQFNASHGVDNDWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|388513689|gb|AFK44906.1| unknown [Medicago truncatula]
Length = 200
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 129/185 (69%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+G+LLV EH PH+L+L
Sbjct: 8 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR L+ LG G+ +W + + + WWRPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWWRPNFETI 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LFLV L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|307107193|gb|EFN55436.1| hypothetical protein CHLNCDRAFT_12869, partial [Chlorella
variabilis]
Length = 185
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 130/184 (70%), Gaps = 5/184 (2%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
+YP+ NYTF K P FEKDSSV R +R+++++ + G+RRSV+ VL+VHEHG PHVL+LQ
Sbjct: 1 VYPVGNYTFGSKPPKFEKDSSVTQRLERLKEKYAREGLRRSVEAVLVVHEHGHPHVLVLQ 60
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
+G +FFKLPGG L GEDE EG+ R L L + ++ +W V D +G WWRPNFE
Sbjct: 61 MGASFFKLPGGRLRPGEDEAEGMLRKLHSLLAPPAENMRPDWRVSDLLGTWWRPNFENMM 120
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY P H+ PKE +RLFL+ LPER VPKN +LVA PL ELYDN YGP+ISS+P
Sbjct: 121 YPYCPAHVARPKEVKRLFLIALPERCYLSVPKNMRLVAVPLFELYDNISRYGPVISSIPA 180
Query: 211 ALCR 214
L R
Sbjct: 181 LLSR 184
>gi|389743616|gb|EIM84800.1| cleavage and polyadenylation specific factor 5 [Stereum hirsutum
FP-91666 SS1]
Length = 204
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKESQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLKR L D L G+ +W + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPAESRQFNTSHGMDNDWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP+VP HIT PKE ++LFLVQ+PE+ VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|170111950|ref|XP_001887178.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637952|gb|EDR02233.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 205
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 131/193 (67%), Gaps = 14/193 (7%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG----------RRDGVKQEWIVEDTIGNW 145
+ FFKLPG L GEDEI+GLKR L + L GV EW + D + W
Sbjct: 67 IANAFFKLPGDYLKPGEDEIDGLKRRLDERLAPPADSRQFDQATHGVDNEWEIGDCLAQW 126
Query: 146 WRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGY 201
WRPNFE YP++P HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ Y
Sbjct: 127 WRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARY 186
Query: 202 GPIISSLPQALCR 214
GP +S++P L R
Sbjct: 187 GPQLSAIPHLLSR 199
>gi|297803568|ref|XP_002869668.1| hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp.
lyrata]
gi|297315504|gb|EFH45927.1| hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 128/185 (69%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLSNY+F K+P EKD+SV R RM+ + K GMR SV+G+LLV EH PH+L+L
Sbjct: 8 NTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTL-GRRDGVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+E++GLKR L+ L G + +W V + + WWRPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENEVDGLKRKLTSKLGGNSAALVPDWKVGECVATWWRPNFETM 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE +RLF+V L E+ VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKRLFIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|393214871|gb|EJD00363.1| cleavage and polyadenylation specific factor 5 [Fomitiporia
mediterranea MF3/22]
Length = 204
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+GVL+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVAARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEIEGLKR L + L G+ +W + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIEGLKRRLDERLAPPSESRQFNTTHGIDNDWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P HIT PKE ++LFLVQ+PE+ VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFIPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|356535879|ref|XP_003536470.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Glycine max]
Length = 200
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 127/185 (68%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+G+LLV EH PH+L+L
Sbjct: 8 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF K PGG L GE+EIEGLKR L+ LG + +W + + + WWRPNFE
Sbjct: 68 QIGNTFCKXPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQISECVAIWWRPNFETI 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LFLV L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|168012875|ref|XP_001759127.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689826|gb|EDQ76196.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 200
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/185 (56%), Positives = 128/185 (69%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N+YPLS+YTF K+ EKD+SV R RM+ + K GMR SV+G+LLV EH PHVL+L
Sbjct: 8 NVYPLSSYTFGSKEAKMEKDTSVADRLARMKQNYMKEGMRTSVEGILLVQEHNHPHVLLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TFFKLPGG L GE+EIEGLKR L+ L ++ EW + + WWRPNFE
Sbjct: 68 QIGNTFFKLPGGRLKTGENEIEGLKRKLTSKLAPTASSIQPEWQIGECAAMWWRPNFETL 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LF+V L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 LYPYQPPHITKPKECKKLFVVCLSERQYFAVPKNLKLLAVPLFELYDNVQRYGPVISAIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|242217376|ref|XP_002474488.1| predicted protein [Postia placenta Mad-698-R]
gi|220726343|gb|EED80295.1| predicted protein [Postia placenta Mad-698-R]
Length = 204
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 131/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDEI+GLKR L + L G+ EW + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEIDGLKRRLDERLAPPTNTQQFDSSHGMGNEWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|90399078|emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 101/183 (55%), Positives = 122/183 (66%), Gaps = 5/183 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+LQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EIEGLKR L L W V + + WWRPNFE Y
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
PY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++PQ
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQ 191
Query: 212 LCR 214
L R
Sbjct: 192 LSR 194
>gi|393230751|gb|EJD38352.1| cleavage and polyadenylation specific factor 5 [Auricularia
delicata TFB-10046 SS5]
Length = 206
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 129/192 (67%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ
Sbjct: 9 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQ 68
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDE EGLK L D L G+ +W + D + WW
Sbjct: 69 IANAFFKLPGDYLKPGEDEFEGLKARLDDRLAPPTNSVQFNSSHGIDNDWEIGDCLAQWW 128
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP+VP HIT PKE ++LFLVQ+PER VPKN KL+A PL ELYDN+ YG
Sbjct: 129 RPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDNAARYG 188
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 189 PQLSAIPHLLSR 200
>gi|224134811|ref|XP_002321911.1| predicted protein [Populus trichocarpa]
gi|118487488|gb|ABK95571.1| unknown [Populus trichocarpa]
gi|222868907|gb|EEF06038.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 127/185 (68%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 10 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 69
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR L+ LG + +W + + + WWRPNFE
Sbjct: 70 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVATWWRPNFETI 129
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++L+LV L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 130 MYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 189
Query: 210 QALCR 214
Q L R
Sbjct: 190 QQLSR 194
>gi|302683230|ref|XP_003031296.1| hypothetical protein SCHCODRAFT_77075 [Schizophyllum commune H4-8]
gi|300104988|gb|EFI96393.1| hypothetical protein SCHCODRAFT_77075 [Schizophyllum commune H4-8]
Length = 204
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 132/192 (68%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+GVL+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG L GEDE++GLKR L + L + G + +W + D + WW
Sbjct: 67 IANAFFKLPGDYLKPGEDEVDGLKRRLDERLAPPNASSQFNQAHGAENDWEIGDCLAQWW 126
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP+VP HIT PKE ++LFLVQ+PE+ VPKN KL+A PL ELYDN+ YG
Sbjct: 127 RPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDNAARYG 186
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 187 PQLSAIPHLLSR 198
>gi|255539475|ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
gi|223549917|gb|EEF51404.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
Length = 200
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 127/185 (68%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 8 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR L+ LG + +W + + + WWRPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LFLV L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|449432171|ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
Length = 200
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 128/185 (69%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 8 NTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR L+ LG ++ +W + + + WWRPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWWRPNFETV 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LF+V L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|225470159|ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Vitis vinifera]
gi|147788664|emb|CAN61008.1| hypothetical protein VITISV_016616 [Vitis vinifera]
gi|302143896|emb|CBI22757.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 127/185 (68%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RMR + K GMR +VD +LLV EH PH+L+L
Sbjct: 8 NTYPLSSYTFGTKEPKMEKDTSVADRLARMRVNYMKEGMRTTVDAILLVQEHTHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR LS L G++ +W + + + WWRPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPDWQIGECVAIWWRPNFETV 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LF+V L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
L R
Sbjct: 188 LHLSR 192
>gi|225454123|ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Vitis vinifera]
gi|297745235|emb|CBI40315.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 127/185 (68%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 8 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR LS L ++ +W + + + WWRPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWWRPNFETI 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LF+V L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|30686923|ref|NP_194285.2| cleavage/polyadenylation specificity factor [Arabidopsis thaliana]
gi|26451195|dbj|BAC42701.1| unknown protein [Arabidopsis thaliana]
gi|28973229|gb|AAO63939.1| unknown protein [Arabidopsis thaliana]
gi|110736890|dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana]
gi|332659676|gb|AEE85076.1| cleavage/polyadenylation specificity factor [Arabidopsis thaliana]
Length = 200
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 127/185 (68%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLSNY+F K+P EKD+SV R RM+ + K GMR SV+G+LLV EH PH+L+L
Sbjct: 8 NTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTL-GRRDGVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+E +GLKR L+ L G + +W V + + WWRPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWWRPNFETM 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE +RL++V L E+ VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|351723959|ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
gi|255627433|gb|ACU14061.1| unknown [Glycine max]
Length = 200
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 127/185 (68%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+G+LLV EH PH+L+L
Sbjct: 8 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+E EGLKR L+ LG + +W + + + WWRPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LFLV L ER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|388515089|gb|AFK45606.1| unknown [Lotus japonicus]
Length = 200
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/185 (56%), Positives = 128/185 (69%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+G+LLV EH PH+L+L
Sbjct: 8 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR L+ LG + +W + + + W RPNFE
Sbjct: 68 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWRRPNFETI 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LFLV LPER VPKN KL+A PL ELYDN Q YGP+IS++P
Sbjct: 128 MYPYRPPHITKPKECKKLFLVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIP 187
Query: 210 QALCR 214
Q L R
Sbjct: 188 QQLSR 192
>gi|358058565|dbj|GAA95528.1| hypothetical protein E5Q_02183 [Mixia osmundae IAM 14324]
Length = 197
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 6/186 (3%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
L+PLSNYTF KD E+D SV AR QR+++++E GMRR+ +G+L+VHEHG PHVLML
Sbjct: 6 TLFPLSNYTFSTKDSQPEEDPSVAARLQRLQNQYEDFGMRRTAEGILVVHEHGHPHVLML 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVK--QEWIVEDTIGNWWRPNFEP 152
Q+ FFKLPG L GED+ EGLKR LS+ L +G + ++W + D + WWRPNFE
Sbjct: 66 QIANAFFKLPGDYLRPGEDDAEGLKRRLSERLDPVEGSRPGEDWEIGDCLAQWWRPNFES 125
Query: 153 PQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSL 208
YPY+P H+T PKE + +LVQ+P R VPKN+KL+A PL ELYDNS YGP +S++
Sbjct: 126 FMYPYIPAHVTKPKECKSFYLVQMPPRKVLCVPKNFKLLAIPLFELYDNSVRYGPQLSAI 185
Query: 209 PQALCR 214
L R
Sbjct: 186 AHFLSR 191
>gi|353237909|emb|CCA69870.1| hypothetical protein PIIN_03809 [Piriformospora indica DSM 11827]
Length = 205
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 131/194 (67%), Gaps = 14/194 (7%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
NLYPLSN+TF K+ E+D SV AR QR+++ +E GMR +V+GVL+VH+HG PH+LML
Sbjct: 6 NLYPLSNFTFSTKESQPEEDPSVAARLQRLQNNYEDYGMRHTVEGVLVVHDHGHPHILML 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG----------RRDGVKQEWIVEDTIGN 144
Q+ FFKLPG L GE+EI+GLK L + L + G+ +W + D +
Sbjct: 66 QIANAFFKLPGDYLKPGEEEIQGLKARLDERLAPTPGTAFQFTEQHGIDNDWEIGDCLAQ 125
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPNFE YP+VP HIT PKE ++L+LVQ+PER VPKN KL+A PL ELYDN+
Sbjct: 126 WWRPNFETFMYPFVPAHITKPKECKKLYLVQMPERKVLAVPKNMKLLAIPLFELYDNAAR 185
Query: 201 YGPIISSLPQALCR 214
YGP +S++P L R
Sbjct: 186 YGPQLSAIPHLLSR 199
>gi|331223749|ref|XP_003324547.1| autocrine motility factor receptor [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309303537|gb|EFP80128.1| autocrine motility factor receptor [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 205
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 130/194 (67%), Gaps = 14/194 (7%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
LYPLSNYTF K+ E+D SV +R QR+++ +E GMRR+V+G+L+VHEHG PHVLML
Sbjct: 6 TLYPLSNYTFSTKEAQPEEDPSVTSRLQRLQNNYEDFGMRRTVEGILVVHEHGHPHVLML 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV----------KQEWIVEDTIGN 144
Q+ FFKLPG L GED++EGLK L D L G +++W + D +
Sbjct: 66 QIANAFFKLPGDYLRPGEDDVEGLKERLDDRLAPPAGQFGAGLTSAQGQKDWEIGDCLSQ 125
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPN+E YPYVP HIT PKE + L+LVQLPE+ VPKN KL+A PL ELYDN Q
Sbjct: 126 WWRPNYESFMYPYVPAHITKPKECKMLYLVQLPEKKVLSVPKNMKLLAIPLFELYDNPQR 185
Query: 201 YGPIISSLPQALCR 214
YGP ++++P L R
Sbjct: 186 YGPQLAAIPHVLSR 199
>gi|226508740|ref|NP_001148753.1| LOC100282369 [Zea mays]
gi|195621890|gb|ACG32775.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
gi|224032173|gb|ACN35162.1| unknown [Zea mays]
gi|413920017|gb|AFW59949.1| cleavage and polyadenylation specificity factor 5 isoform 1 [Zea
mays]
gi|413920018|gb|AFW59950.1| cleavage and polyadenylation specificity factor 5 isoform 2 [Zea
mays]
Length = 202
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 124/185 (67%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N+YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 10 NVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 69
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR L L W V + + WWRPNFE
Sbjct: 70 QIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETV 129
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++P
Sbjct: 130 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQRYGPVISTIP 189
Query: 210 QALCR 214
Q L R
Sbjct: 190 QQLSR 194
>gi|32488646|emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group]
Length = 202
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 123/183 (67%), Gaps = 5/183 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV RF RM+ + K GMR SV+ +LLV EH PH+L+LQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EIEGLKR L L W V + + WWRPNFE Y
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
PY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++PQ
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQ 191
Query: 212 LCR 214
L R
Sbjct: 192 LSR 194
>gi|315259982|gb|ADT92189.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 223
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 124/185 (67%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N+YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 10 NVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 69
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE+EIEGLKR L L W V + + WWRPNFE
Sbjct: 70 QIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETV 129
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++P
Sbjct: 130 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQRYGPVISTIP 189
Query: 210 QALCR 214
Q L R
Sbjct: 190 QQLSR 194
>gi|115461402|ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group]
gi|113565872|dbj|BAF16215.1| Os04g0683100, partial [Oryza sativa Japonica Group]
Length = 259
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 123/183 (67%), Gaps = 5/183 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV RF RM+ + K GMR SV+ +LLV EH PH+L+LQ+
Sbjct: 69 YPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 128
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EIEGLKR L L W V + + WWRPNFE Y
Sbjct: 129 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 188
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
PY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++PQ
Sbjct: 189 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQ 248
Query: 212 LCR 214
L R
Sbjct: 249 LSR 251
>gi|328861857|gb|EGG10959.1| hypothetical protein MELLADRAFT_59931 [Melampsora larici-populina
98AG31]
Length = 205
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 130/194 (67%), Gaps = 14/194 (7%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
LYPLSNYTF K+ E+D SV +R QR+++ +E GMRR+V+G+L+VHEHG PHVLML
Sbjct: 6 TLYPLSNYTFSTKEAQPEEDPSVTSRLQRLQNNYEDFGMRRTVEGILVVHEHGHPHVLML 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV----------KQEWIVEDTIGN 144
Q+ FFKLPG L GED+IEGLK L + L G +++W + D +
Sbjct: 66 QIANAFFKLPGDYLRPGEDDIEGLKERLDERLAPPPGQFGAGLTSAQGQKDWEIGDCLSQ 125
Query: 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQG 200
WWRPN+E YPYVP HIT PKE + L+LVQLPE+ VPKN KL+A PL ELYDN Q
Sbjct: 126 WWRPNYESFMYPYVPAHITKPKECKMLYLVQLPEKKVLSVPKNMKLLAIPLFELYDNPQR 185
Query: 201 YGPIISSLPQALCR 214
YGP ++++P L R
Sbjct: 186 YGPQLAAIPHILSR 199
>gi|226493713|ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea mays]
gi|194705542|gb|ACF86855.1| unknown [Zea mays]
gi|218195850|gb|EEC78277.1| hypothetical protein OsI_17973 [Oryza sativa Indica Group]
gi|222629797|gb|EEE61929.1| hypothetical protein OsJ_16671 [Oryza sativa Japonica Group]
gi|223944619|gb|ACN26393.1| unknown [Zea mays]
gi|414584722|tpg|DAA35293.1| TPA: cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 122/183 (66%), Gaps = 5/183 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+LQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EIEGLKR L L W V + + WWRPNFE Y
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
PY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++PQ
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQ 191
Query: 212 LCR 214
L R
Sbjct: 192 LSR 194
>gi|302836914|ref|XP_002950017.1| hypothetical protein VOLCADRAFT_59795 [Volvox carteri f.
nagariensis]
gi|300264926|gb|EFJ49120.1| hypothetical protein VOLCADRAFT_59795 [Volvox carteri f.
nagariensis]
Length = 232
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 128/185 (69%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N+YP+ NY+F K P EKDS+V R R++ +EK GMRRS + +LLV EH PHVL+
Sbjct: 10 NVYPVGNYSFGTKAPKLEKDSNVNERLSRLKANYEKEGMRRSAEAILLVQEHNHPHVLLF 69
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-EWIVEDTIGNWWRPNFEPP 153
QLG +FF+LPGG L GEDE+EGL+R LS+ L + Q W V + + ++RPNF+
Sbjct: 70 QLGQSFFRLPGGRLRPGEDEVEGLRRKLSNRLAPTNAALQVVWDVGEVLSVFYRPNFDTM 129
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPYVP HIT PKE R+LF+VQLPER VPKN KLVA P+ ELYDN YGPIISSLP
Sbjct: 130 FYPYVPPHITRPKECRKLFVVQLPERCVFAVPKNMKLVAVPVFELYDNIPRYGPIISSLP 189
Query: 210 QALCR 214
L R
Sbjct: 190 AVLSR 194
>gi|242077722|ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
gi|241939980|gb|EES13125.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
Length = 202
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 122/183 (66%), Gaps = 5/183 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+LQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EIEGLKR L L W + + + WWRPNFE Y
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQIGECVAVWWRPNFETVMY 131
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
PY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++PQ
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQ 191
Query: 212 LCR 214
L R
Sbjct: 192 LSR 194
>gi|402218179|gb|EJT98257.1| cleavage and polyadenylation specific factor 5 [Dacryopinax sp.
DJM-731 SS1]
Length = 199
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 128/187 (68%), Gaps = 8/187 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSN+TF K+ E+D SV AR QR+++ +E GMRR+V+GVL+VH+HG PH+LMLQ
Sbjct: 7 LYPLSNFTFTTKEAQPEEDPSVAARLQRLQNNYEDYGMRRTVEGVLVVHDHGHPHILMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQE----WIVEDTIGNWWRPNFE 151
+ FFKLPG + GEDE+EGLK+ L L E W + D + WWRPNFE
Sbjct: 67 IANAFFKLPGDYVKPGEDEVEGLKKRLDVRLEPTSPPYSESTDNWEIGDCLAQWWRPNFE 126
Query: 152 PPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISS 207
YP++P H+T PKE +++FLVQLPE+ VPKN KL+A PL ELYDNS YGP +S+
Sbjct: 127 TFMYPFIPAHVTKPKECKKMFLVQLPEKKVMAVPKNMKLLAVPLFELYDNSARYGPQLSA 186
Query: 208 LPQALCR 214
+P L R
Sbjct: 187 IPHLLSR 193
>gi|195622596|gb|ACG33128.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 122/183 (66%), Gaps = 5/183 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+LQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EIEGLKR L L W V + + WWRPNFE Y
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
PY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++PQ
Sbjct: 132 PYCPPHITKPKECKKLFIVHLFEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQ 191
Query: 212 LCR 214
L R
Sbjct: 192 LSR 194
>gi|326499514|dbj|BAJ86068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 122/185 (65%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N+YPL+NYTF K+ EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 76 NVYPLANYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 135
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
Q+G TF KLPGG L GE EIEGLKR L L W V + + WWRPNFE
Sbjct: 136 QIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAEWWRPNFETV 195
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY P HI+ PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++P
Sbjct: 196 MYPYCPPHISKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIP 255
Query: 210 QALCR 214
Q L R
Sbjct: 256 QQLSR 260
>gi|159480710|ref|XP_001698425.1| hypothetical protein CHLREDRAFT_77351 [Chlamydomonas reinhardtii]
gi|158282165|gb|EDP07918.1| predicted protein [Chlamydomonas reinhardtii]
Length = 199
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N+YPL+NYTF K P EKD+SV R R+R +E+ GMRRSV+ VL+V EH PHVL+L
Sbjct: 10 NVYPLTNYTFGNKQPKLEKDTSVQERLARLRSSYEQHGMRRSVEAVLVVQEHNTPHVLLL 69
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPP 153
QLG FKLPGG L GE+E+EGL+R L++TL + + W V + +G ++RPNF+
Sbjct: 70 QLGLNHFKLPGGRLRPGEEEVEGLRRKLTNTLAPANPSLHITWDVGEVLGVFYRPNFDTV 129
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPYVP HIT PKE R+LF+VQLPER VPKN +LVA PL +L+DN YGP+I++LP
Sbjct: 130 FYPYVPPHITRPKESRKLFVVQLPERCVFAVPKNMRLVAVPLFDLHDNLPRYGPVITALP 189
Query: 210 QALCR 214
L R
Sbjct: 190 AVLSR 194
>gi|357166798|ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 122/183 (66%), Gaps = 5/183 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+LQ+
Sbjct: 13 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 72
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EI+GLKR L L W V + + WWRPNFE Y
Sbjct: 73 GNTFCKLPGGRLKPGENEIDGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 132
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
PY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q YGP+IS++PQ
Sbjct: 133 PYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYGPVISTIPQQ 192
Query: 212 LCR 214
L R
Sbjct: 193 LSR 195
>gi|451853881|gb|EMD67174.1| hypothetical protein COCSADRAFT_82596 [Cochliobolus sativus ND90Pr]
gi|451993650|gb|EMD86122.1| hypothetical protein COCHEDRAFT_1146579 [Cochliobolus
heterostrophus C5]
gi|451999796|gb|EMD92258.1| hypothetical protein COCHEDRAFT_1224116 [Cochliobolus
heterostrophus C5]
Length = 275
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 132/204 (64%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ N+ K LYPLSNYTF KD E+D SV AR +R+ + + + GMRR+ +G+
Sbjct: 16 VIPKDFNGNQPKTIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYSEHGMRRTCEGI 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PH+LMLQ+ FFKLPG L +DEIEG K L++ L +GV
Sbjct: 76 LVCHEHNHPHILMLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVND 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAP 190
EW+V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP VPKN KL+A P
Sbjct: 136 EWVVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|242770229|ref|XP_002341936.1| cleavage and polyadenylation specific factor 5 [Talaromyces
stipitatus ATCC 10500]
gi|218725132|gb|EED24549.1| cleavage and polyadenylation specific factor 5 [Talaromyces
stipitatus ATCC 10500]
Length = 277
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 136/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ N+ + LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +GV
Sbjct: 16 IIPKSFDANQPQTIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYEKHGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG L+ +DEI G K L++ L +GV +
Sbjct: 76 LVCHEHNHPHVLMLQIANAFFKLPGDYLHHDDDEITGFKTRLNERLAPVGSQFTGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W V DT+ WWRPNFE YP++P H+T PKE ++L+L+QLP++ VPKN KL+A P
Sbjct: 136 DWEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYLIQLPKKKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|171686284|ref|XP_001908083.1| hypothetical protein [Podospora anserina S mat+]
gi|170943103|emb|CAP68756.1| unnamed protein product [Podospora anserina S mat+]
Length = 276
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 127/188 (67%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ D +EK GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVIARLERLNDHYEKHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-----EWIVEDTIGNWWRPNF 150
+ FFKLPG L+ +DEIEG KR L + L + + +W + D + WWRPN
Sbjct: 91 IANAFFKLPGDYLHPEDDEIEGFKRRLDERLAPVGSLGEGNKAADWEIGDCLAQWWRPNT 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP HIT PKE ++L+L+QLPE VPKN KL+A PL ELYDN+Q YGP +S
Sbjct: 151 ETFMYPFVPAHITRPKECKKLYLIQLPETKVLSVPKNMKLLAVPLFELYDNTQRYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|70985266|ref|XP_748139.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus Af293]
gi|66845767|gb|EAL86101.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus Af293]
gi|159125937|gb|EDP51053.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus A1163]
Length = 334
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 136/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ + K LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +GV
Sbjct: 72 IIPKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGV 131
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG L+ +DE+EG K+ L++ L +GV +
Sbjct: 132 LVCHEHNHPHVLMLQIANAFFKLPGDYLHFDDDEVEGFKKRLNERLAPVGSQFSGEGVNE 191
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 192 DWEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVP 251
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 252 LFELYDNTARYGPQLSAIPHLLSR 275
>gi|327301289|ref|XP_003235337.1| cleavage and polyadenylation specific factor 5 [Trichophyton rubrum
CBS 118892]
gi|326462689|gb|EGD88142.1| cleavage and polyadenylation specific factor 5 [Trichophyton rubrum
CBS 118892]
Length = 274
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 135/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I ++ N+ K LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GV
Sbjct: 16 IIPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG L +DEIEG K L++ L +GV +
Sbjct: 76 LVCHEHNHPHVLMLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 136 DWEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|315049019|ref|XP_003173884.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma gypseum CBS 118893]
gi|311341851|gb|EFR01054.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma gypseum CBS 118893]
Length = 274
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 135/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I ++ N+ K LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GV
Sbjct: 16 IIPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG L +DEIEG K L++ L +GV +
Sbjct: 76 LVCHEHNHPHVLMLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 136 DWEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|121719266|ref|XP_001276338.1| cleavage and polyadenylation specific factor 5 [Aspergillus
clavatus NRRL 1]
gi|119404536|gb|EAW14912.1| cleavage and polyadenylation specific factor 5 [Aspergillus
clavatus NRRL 1]
Length = 278
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 130/189 (68%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ +DE+EG K+ L++ L +GV ++W V DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEVGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|119499145|ref|XP_001266330.1| cleavage and polyadenylation specific factor 5 [Neosartorya
fischeri NRRL 181]
gi|119414494|gb|EAW24433.1| cleavage and polyadenylation specific factor 5 [Neosartorya
fischeri NRRL 181]
Length = 278
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 136/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ + K LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +GV
Sbjct: 16 IIPKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG L+ +DE+EG K+ L++ L +GV +
Sbjct: 76 LVCHEHNHPHVLMLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 136 DWEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|396492444|ref|XP_003843800.1| similar to cleavage and polyadenylation specificity factor subunit
5 [Leptosphaeria maculans JN3]
gi|312220380|emb|CBY00321.1| similar to cleavage and polyadenylation specificity factor subunit
5 [Leptosphaeria maculans JN3]
Length = 272
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 131/204 (64%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
++ K+ N+ K LYPLSNYTF KD E+D SV AR +R+ + + + GMRR+ +G+
Sbjct: 16 VLPKDFNANQPKTIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYTEYGMRRTCEGI 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PH+LMLQ+ FFKLPG L +DEIEG K L++ L +GV
Sbjct: 76 LVCHEHNHPHILMLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVND 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAP 190
EW V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP VPKN KL+A P
Sbjct: 136 EWQVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|302667099|ref|XP_003025141.1| hypothetical protein TRV_00666 [Trichophyton verrucosum HKI 0517]
gi|291189229|gb|EFE44530.1| hypothetical protein TRV_00666 [Trichophyton verrucosum HKI 0517]
Length = 272
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 135/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I ++ N+ K LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GV
Sbjct: 14 IIPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGV 73
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG L +DEIEG K L++ L +GV +
Sbjct: 74 LVCHEHNHPHVLMLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNE 133
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 134 DWEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVP 193
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 194 LFELYDNTARYGPQLSAIPHLLSR 217
>gi|330948046|ref|XP_003307047.1| hypothetical protein PTT_20368 [Pyrenophora teres f. teres 0-1]
gi|311315165|gb|EFQ84874.1| hypothetical protein PTT_20368 [Pyrenophora teres f. teres 0-1]
Length = 275
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 132/204 (64%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ N+ K L+PLSNYTF KD E+D SV AR +R+ + + + GMRR+ +G+
Sbjct: 16 VIPKDFNGNQPKTIRLFPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYAEHGMRRTCEGI 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PH+LMLQ+ FFKLPG L +DE+EG K L++ L +GV
Sbjct: 76 LVCHEHNHPHILMLQIANAFFKLPGDYLRAEDDEVEGFKARLNERLAPVGTQFTGEGVND 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAP 190
EW+V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP VPKN KL+A P
Sbjct: 136 EWVVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|296410690|ref|XP_002835068.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627843|emb|CAZ79189.1| unnamed protein product [Tuber melanosporum]
Length = 261
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 126/189 (66%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR QR+++ +E+ GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGTKENQPEEDPSVLARLQRLQEHYEQYGMRRTCEGILVCHEHCHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ E E+EG K L++ L +GV EW + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLHHHESELEGFKSRLNERLAPVGSQFSGEGVNDEWEIGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|169616107|ref|XP_001801469.1| hypothetical protein SNOG_11226 [Phaeosphaeria nodorum SN15]
gi|111060605|gb|EAT81725.1| hypothetical protein SNOG_11226 [Phaeosphaeria nodorum SN15]
Length = 261
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 132/204 (64%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
++ K+ N+ K LYPLSNYTF KD E+D SV AR +R+ + +++ GMRR+ +G+
Sbjct: 5 VLPKDFNANQPKTIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYQEHGMRRTCEGI 64
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PH+LMLQ+ FFKLPG L +DEIEG K L++ L +GV
Sbjct: 65 LVCHEHNHPHILMLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVND 124
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAP 190
EW V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP VPKN KL+A P
Sbjct: 125 EWQVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVP 184
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 185 LFELYDNTARYGPQLSAIPHLLSR 208
>gi|296817503|ref|XP_002849088.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma otae CBS 113480]
gi|238839541|gb|EEQ29203.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma otae CBS 113480]
Length = 275
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L +DEIEG K L++ L +GV ++W V DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLQHSDDEIEGFKSRLNERLAPVGSQFTGEGVNEDWEVGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|154284992|ref|XP_001543291.1| hypothetical protein HCAG_00337 [Ajellomyces capsulatus NAm1]
gi|150406932|gb|EDN02473.1| hypothetical protein HCAG_00337 [Ajellomyces capsulatus NAm1]
Length = 285
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ +DE+EG K L++ L +GV +W + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDDWEIGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|325093550|gb|EGC46860.1| cleavage and polyadenylation specific subunit [Ajellomyces
capsulatus H88]
Length = 285
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ +DE+EG K L++ L +GV +W + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDDWEIGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|388582603|gb|EIM22907.1| cleavage and polyadenylation specificity factor, 25 kDa subunit,
partial [Wallemia sebi CBS 633.66]
Length = 202
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 128/192 (66%), Gaps = 12/192 (6%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N+YPL NYTF ++ E+D+SV AR QR+++ +E GMRR+V+G+++VHEHG PH+LML
Sbjct: 5 NIYPLQNYTFTQREAQPEEDASVAARLQRLQNNYEDFGMRRTVEGIMVVHEHGHPHILML 64
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--------RRDGVKQEWIVEDTIGNWW 146
Q+ FFKLPG L GE + GLK+ L D L DG EW + D + WW
Sbjct: 65 QIANAFFKLPGDYLTPGETDEPGLKKRLDDRLAPLDPTMFDPEDGALNEWEIGDCLAQWW 124
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P H+T PKE +++++V LPER VP+N KL+A P+ ELYDNS YG
Sbjct: 125 RPNFETFMYPFIPAHVTKPKECKKMYVVGLPERKVFAVPRNMKLLAIPVFELYDNSGRYG 184
Query: 203 PIISSLPQALCR 214
P ++++P L R
Sbjct: 185 PQLAAIPHLLSR 196
>gi|295665162|ref|XP_002793132.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226278046|gb|EEH33612.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 278
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 127/189 (67%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ +DE+EG K L++ L GV EW + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDEWEIGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|261202886|ref|XP_002628657.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis SLH14081]
gi|239590754|gb|EEQ73335.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis SLH14081]
gi|239612473|gb|EEQ89460.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis ER-3]
gi|327350559|gb|EGE79416.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 286
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ +DE+EG K L++ L +GV +W + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDDWEIGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|328771011|gb|EGF81052.1| hypothetical protein BATDEDRAFT_88168 [Batrachochytrium
dendrobatidis JAM81]
Length = 202
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 128/187 (68%), Gaps = 7/187 (3%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
+LYPLS ++F KDP E D ++ A+ R++ EFE GMR SV+GVLLVHEHG PH+LML
Sbjct: 10 SLYPLSGFSFGAKDPQMEDDQTMSAKLNRLQSEFEIQGMRTSVEGVLLVHEHGHPHILML 69
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTL---GRRDGVKQEWIVEDTIGNWWRPNFE 151
Q+ +++ LPGG L GEDEIEGLK ++ L G + ++ V + IG WWRP+ E
Sbjct: 70 QVANSYYSLPGGILKPGEDEIEGLKLRINQKLAPIGHDQTSESDFDVGELIGVWWRPSIE 129
Query: 152 PPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISS 207
YPYVP HI+ PKE R+++L+ LPE+ VPKN KL+A PL ELYDN+ YGP +++
Sbjct: 130 SIMYPYVPAHISRPKEMRKVYLIHLPEKKLLSVPKNMKLLAVPLFELYDNAARYGPHLTT 189
Query: 208 LPQALCR 214
LP L R
Sbjct: 190 LPNLLSR 196
>gi|212541905|ref|XP_002151107.1| cleavage and polyadenylation specific factor 5 [Talaromyces
marneffei ATCC 18224]
gi|210066014|gb|EEA20107.1| cleavage and polyadenylation specific factor 5 [Talaromyces
marneffei ATCC 18224]
Length = 282
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 135/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ N+ + LYPLSNYTF K+ E+D SV AR +R+ + ++ GMRR+ +GV
Sbjct: 16 IIPKSFDANQPQTIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYDLYGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG L+ +DEI G K L++ L +GV +
Sbjct: 76 LVCHEHNHPHVLMLQIANAFFKLPGDYLHHDDDEIAGFKTRLNERLAPVGSQFSGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W V DT+ WWRPNFE YP++P H+T PKE ++L+L+QLP++ VPKN KL+A P
Sbjct: 136 DWEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYLIQLPKKKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|119182817|ref|XP_001242516.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392865416|gb|EAS31200.2| cleavage and polyadenylation specific factor 5 [Coccidioides
immitis RS]
Length = 277
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L +DE++G K L++ L +GV ++W V DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLKHTDDEVDGFKARLNERLAPVGSQFSGEGVNEDWEVGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|358368193|dbj|GAA84810.1| cleavage and polyadenylation specific factor 5 [Aspergillus
kawachii IFO 4308]
Length = 277
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 135/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ + K LYPLSNYTF K+ E+D SV AR +R+ + ++ GMRR+ +GV
Sbjct: 16 IIPKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDLHGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG LN +DE+EG K+ L++ L +GV +
Sbjct: 76 LVCHEHNHPHVLMLQIANAFFKLPGDYLNFEDDEVEGFKKRLNERLAPVGSQFSGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 136 DWEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|303319441|ref|XP_003069720.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109406|gb|EER27575.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320040829|gb|EFW22762.1| cleavage and polyadenylation specific factor 5 [Coccidioides
posadasii str. Silveira]
Length = 277
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L +DE++G K L++ L +GV ++W + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLKHTDDEVDGFKARLNERLAPVGSQFSGEGVNEDWEIGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|406868246|gb|EKD21283.1| putative cleavage and polyadenylation specificity factor subunit 5
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 264
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 134/204 (65%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
++ K+ N+ K L+PLSNYTF K+ E+D SV AR +R+ + ++ GMRR+ +G+
Sbjct: 16 ILPKDFNGNQPKTIRLFPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDVHGMRRTCEGI 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PH+LMLQ+ FFKLPG L + +DEIEG K L++ L +GV +
Sbjct: 76 LVCHEHNHPHILMLQIANAFFKLPGDYLKEDDDEIEGFKMRLNERLAPVGTQFSGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
EW + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP + VPKN KL+A P
Sbjct: 136 EWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRQKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|345569784|gb|EGX52610.1| hypothetical protein AOL_s00007g393 [Arthrobotrys oligospora ATCC
24927]
Length = 276
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 130/204 (63%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I + N+ K LYPLSNYTF K+ E+D SV AR QR+++ +EK GMRR+ +G+
Sbjct: 18 IIPPDFSANQPKTIRLYPLSNYTFGTKENQPEEDPSVLARLQRLQEHYEKHGMRRTCEGI 77
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PH+LMLQ+ FFKLPG L EDEI G K L++ L +GV
Sbjct: 78 LVCHEHCHPHILMLQIANAFFKLPGDYLQPEEDEISGFKARLNERLAPVGNQFSGEGVND 137
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAP 190
EW + DT+ WWRPNFE YP++P H+T PKE ++L+ + LP VPKN KL+A P
Sbjct: 138 EWEIGDTLAQWWRPNFETFLYPFIPAHVTRPKEVKKLYFIHLPRSKVLSVPKNMKLLAVP 197
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 198 LFELYDNTARYGPQLSAIPHLLSR 221
>gi|169771819|ref|XP_001820379.1| cleavage and polyadenylation specificity factor subunit 5
[Aspergillus oryzae RIB40]
gi|238485582|ref|XP_002374029.1| cleavage and polyadenylation specific factor 5 [Aspergillus flavus
NRRL3357]
gi|83768238|dbj|BAE58377.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698908|gb|EED55247.1| cleavage and polyadenylation specific factor 5 [Aspergillus flavus
NRRL3357]
gi|391874667|gb|EIT83512.1| mRNA cleavage factor I subunit [Aspergillus oryzae 3.042]
Length = 275
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 130/189 (68%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +++ GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDQHGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ +DE+EG K+ L++ L +GV ++W + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|440636758|gb|ELR06677.1| hypothetical protein GMDG_00294 [Geomyces destructans 20631-21]
Length = 269
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 135/215 (62%), Gaps = 10/215 (4%)
Query: 10 SNSTLVTVNRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFE 69
+ + L T I +S N + LYPLSNYTF K+ E+D SV AR +R+ + +E
Sbjct: 5 TATALQTSYAPILPLSFNGNQSETIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYE 64
Query: 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-- 127
GMRR+ +G+L+ HEH PH+LMLQ+ FFKLPG L +DEIEG K L++ L
Sbjct: 65 LHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEIEGFKARLNERLAPV 124
Query: 128 ----RRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER---- 179
+GV ++W + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP +
Sbjct: 125 GSQFSGEGVNEDWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRQKVLS 184
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VPKN KL+A PL ELYDN+ YGP +S++P L R
Sbjct: 185 VPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSR 219
>gi|156048430|ref|XP_001590182.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154693343|gb|EDN93081.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 271
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 134/204 (65%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
++ K+ N+ K LYPLSNYTF K+ E+D SV AR +R+ + + + GMRR+ +G+
Sbjct: 16 ILPKSFNANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYVEHGMRRTCEGI 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PH+LMLQ+ FFKLPG L +DE+EG K+ L++ L +GV +
Sbjct: 76 LVCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQFSGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
EW + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP + VPKN KL+A P
Sbjct: 136 EWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|357166800|ref|XP_003580857.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 121/183 (66%), Gaps = 5/183 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ ++LV EH PHVL+LQ+
Sbjct: 13 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAIMLVQEHNHPHVLLLQI 72
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EI+GLKR L LG W V + +G WWRPNF+ Y
Sbjct: 73 GNTFCKLPGGRLKPGENEIDGLKRKLCSKLGVNSPSFPPNWQVGECVGVWWRPNFDNVMY 132
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
PY P HIT PKE ++LF+V L ER +P+ KL A PL E+YDN Q +GP+IS++P
Sbjct: 133 PYCPPHITKPKECKKLFIVHLTEREYFAIPRKLKLRAVPLFEIYDNVQRFGPVISTIPLQ 192
Query: 212 LCR 214
L R
Sbjct: 193 LSR 195
>gi|347841328|emb|CCD55900.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 134/204 (65%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
++ K+ N+ K L+PLSNYTF K+ E+D SV AR +R+ + + + GMRR+ +G+
Sbjct: 68 ILPKSFNANQPKTIRLFPLSNYTFGTKETQPEEDPSVLARLKRLEEHYVEHGMRRTCEGI 127
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PH+LMLQ+ FFKLPG L +DE+EG K+ L++ L +GV +
Sbjct: 128 LVCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQFSGEGVNE 187
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
EW + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP + VPKN KL+A P
Sbjct: 188 EWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPKNMKLLAVP 247
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 248 LFELYDNTARYGPQLSAIPHLLSR 271
>gi|145251974|ref|XP_001397500.1| cleavage and polyadenylation specificity factor subunit 5
[Aspergillus niger CBS 513.88]
gi|134083042|emb|CAK42804.1| unnamed protein product [Aspergillus niger]
gi|350633409|gb|EHA21774.1| hypothetical protein ASPNIDRAFT_183952 [Aspergillus niger ATCC
1015]
Length = 277
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 135/204 (66%), Gaps = 12/204 (5%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ + K LYPLSNYTF K+ E+D SV AR +R+ + ++ GMRR+ +GV
Sbjct: 16 IIPKDFSAQQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDLHGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ HEH PHVLMLQ+ FFKLPG L+ +DE+EG K+ L++ L +GV +
Sbjct: 76 LVCHEHNHPHVLMLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNE 135
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 136 DWEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 196 LFELYDNTARYGPQLSAIPHLLSR 219
>gi|388856433|emb|CCF49982.1| uncharacterized protein [Ustilago hordei]
Length = 203
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 126/194 (64%), Gaps = 17/194 (8%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
L+P++++TF KD E+D SV AR QR+++ +E +GMRR+V+ VL+VHEHG PHVLML
Sbjct: 6 TLHPVTSFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPHVLML 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--------------RRDGVKQEWIVED 140
Q+ FFKLPG L GEDE+EG+K L + LG R+ EW ++D
Sbjct: 66 QIANAFFKLPGDYLKPGEDEVEGMKARLDERLGPVESDPNSFGPNGEGRNKDDGEWEIQD 125
Query: 141 TIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPERVPKNYKLVAAPLVELYDNSQG 200
+ WWRPNFE YPY P HIT PKE ++LF V VPKN KL+A PL ELYDNSQ
Sbjct: 126 CLAQWWRPNFETFMYPYAPPHITKPKECKKLFQVL---AVPKNMKLLAVPLFELYDNSQR 182
Query: 201 YGPIISSLPQALCR 214
YGP ++++P L R
Sbjct: 183 YGPQLAAIPHLLSR 196
>gi|340959576|gb|EGS20757.1| hypothetical protein CTHT_0025930 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 266
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 125/188 (66%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + +++ GMRR+ +GVL+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQQYGMRRTCEGVLVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-----EWIVEDTIGNWWRPNF 150
+ FFKLPG L +DEIEG K L + L + + +W + D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPDDDEIEGFKARLDERLAPVGSLGEGNKAGDWQIGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP HIT PKE ++L+ +QLPE VPKN KL+A PL ELYDN+Q YGP +S
Sbjct: 151 ETFMYPFVPAHITRPKECKKLYFIQLPETKVLSVPKNMKLLAVPLFELYDNTQRYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|255955443|ref|XP_002568474.1| Pc21g14600 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590185|emb|CAP96357.1| Pc21g14600 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 278
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ +++ GMRR+ +G+L+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEQYRLHGMRRTCEGILVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ +DEIEG K+ L++ L +GV +W + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLHHEDDEIEGFKKRLNERLAPVGSQFSGEGVNDDWEISDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ ++LP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 151 FETFMYPFLPAHVTRPKECKKLYFIRLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHLLSR 219
>gi|452982522|gb|EME82281.1| hypothetical protein MYCFIDRAFT_40599 [Pseudocercospora fijiensis
CIRAD86]
Length = 274
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 125/189 (66%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV R +R+ + +EK GMRR+ +G+L+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYEKHGMRRTCEGILVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSD------TLGRRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L DEIEG K L++ +LG + +W V DT+ W+RPN
Sbjct: 91 IANAFFKLPGDYLQHDVDEIEGFKARLNERLAPTGSLGASEAADSDWDVADTLAQWYRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ ++LP+ VPKN KL+A PL ELYDNSQ YGP +
Sbjct: 151 FETFMYPFLPPHVTRPKECKKLYFIRLPKAKVLSVPKNMKLLAVPLFELYDNSQRYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHYLSR 219
>gi|443895157|dbj|GAC72503.1| mRNA cleavage factor I subunit [Pseudozyma antarctica T-34]
Length = 210
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 127/198 (64%), Gaps = 18/198 (9%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
L+P++ +TF K+ E+D SV AR QR+++ +E +GMRR+V+ VL+VHEHG PHVLML
Sbjct: 6 TLHPVTAFTFTTKEAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPHVLML 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--------------RRDGVKQEWIVED 140
Q+ FFKLPG L GEDE+EG+K L + L R+ +W ++D
Sbjct: 66 QIANAFFKLPGDYLKPGEDEVEGMKARLDERLSPVESDPASFGPNGEGRNKDDGDWEIQD 125
Query: 141 TIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYD 196
+ WWRPNFE YPY P H+T PKE ++LFLV +P VPKN KL+A PL ELYD
Sbjct: 126 CLAQWWRPNFETFMYPYAPPHVTKPKECKKLFLVTIPPTKVLAVPKNMKLLAVPLFELYD 185
Query: 197 NSQGYGPIISSLPQALCR 214
NSQ YGP ++++P L R
Sbjct: 186 NSQRYGPQLAAIPHLLSR 203
>gi|453084000|gb|EMF12045.1| pre-mRNA cleavage factor I 25 kDa subunit, partial [Mycosphaerella
populorum SO2202]
Length = 259
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 124/190 (65%), Gaps = 11/190 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV R +R+ + +EK GMRR+ +G+L+ HEH PHVLMLQ
Sbjct: 30 LYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYEKHGMRRTCEGILVCHEHNHPHVLMLQ 89
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-------RRDGVKQEWIVEDTIGNWWRP 148
+ FFKLPG L DEIEG K L++ L ++W + DT+ W+RP
Sbjct: 90 IANAFFKLPGDYLRHDVDEIEGFKERLNERLAPTGSLGDSATAADRDWNIADTLAQWYRP 149
Query: 149 NFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPI 204
NFE YP++P H+T PKE ++L+L+QLPE VPKN KL+A PL ELYDNSQ YGP
Sbjct: 150 NFETFMYPFLPPHVTRPKECKKLYLIQLPEGKVLSVPKNMKLLAVPLFELYDNSQRYGPQ 209
Query: 205 ISSLPQALCR 214
+S++P L R
Sbjct: 210 LSAIPHYLSR 219
>gi|302915883|ref|XP_003051752.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732691|gb|EEU46039.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 264
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 9/200 (4%)
Query: 24 ISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV 83
+S N K LYPLSNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+
Sbjct: 19 LSFNGHQPEKVTLYPLSNYTFGVKETQLEEDPSVIARLKRLEEHYTEHGMRRTCEGILVC 78
Query: 84 HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIV 138
HEH PH+LMLQ+ FFKLPG L +DEIEG K L + L R G +E W V
Sbjct: 79 HEHNHPHILMLQIANAFFKLPGDYLKPEDDEIEGFKSRLDERLAPVGRLGEGEEAGDWQV 138
Query: 139 EDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVEL 194
D + WWRPNFE YP+VP H+T PKE ++L+ +QLP+ VPKN KL+A PL EL
Sbjct: 139 GDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKTKVLSVPKNMKLLAVPLFEL 198
Query: 195 YDNSQGYGPIISSLPQALCR 214
YDN+ YGP +S++P L R
Sbjct: 199 YDNTARYGPQLSAIPHLLSR 218
>gi|449298073|gb|EMC94090.1| hypothetical protein BAUCODRAFT_567664 [Baudoinia compniacensis
UAMH 10762]
Length = 262
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 123/192 (64%), Gaps = 13/192 (6%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV R +R+ + +E+ GMRR+ + VL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKEGQPEEDPSVKERLRRLEEHYEQHGMRRTCEAVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGVKQEWIVEDTIGNWW 146
+ FFKLPG + DEIEG K L++ L R + +W V DT+ WW
Sbjct: 91 IANAFFKLPGDYIPHSSDEIEGFKARLNERLAPPPTSSLSTRDTPAEADWNVTDTLAVWW 150
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YPY+P H+T PKE ++L+L+QLP+ VPKN KL+A PL ELYDN+Q YG
Sbjct: 151 RPNFETFMYPYLPAHVTRPKECKKLYLIQLPKSKVLSVPKNMKLLAVPLFELYDNTQRYG 210
Query: 203 PIISSLPQALCR 214
P +S +P L R
Sbjct: 211 PQLSGIPHYLSR 222
>gi|397498824|ref|XP_003820174.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Pan paniscus]
Length = 258
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 132/184 (71%), Gaps = 11/184 (5%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV--LLVHEHGLPHVL 92
LYP+ NYTF K+PL+EKDSSV +RFQ+MR+E +KIGMR +++G L L +VL
Sbjct: 52 KLYPIINYTFGTKEPLYEKDSSVSSRFQQMREELDKIGMRSNIEGDSDCLQALVWLLYVL 111
Query: 93 MLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEP 152
+L LG TFFKLP GEL+ G+ E+EGLK L++ L +DGV ++ + IGNWWR
Sbjct: 112 LLLLGATFFKLPDGELSPGKGEVEGLKCLMTGILSHQDGVLKDARLGHCIGNWWR----- 166
Query: 153 PQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSL 208
P YPY+PV+IT PKEH++LFL QL E+ + KNYKL+A PL ELY+N+ GYGPI+ SL
Sbjct: 167 PXYPYIPVYITKPKEHKKLFLAQLQEKALFAISKNYKLIATPLFELYNNALGYGPIVCSL 226
Query: 209 PQAL 212
PQ L
Sbjct: 227 PQLL 230
>gi|116779420|gb|ABK21275.1| unknown [Picea sitchensis]
Length = 177
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 114/169 (67%), Gaps = 5/169 (2%)
Query: 51 FEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQ 110
EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+LQ+G TF KLPGG L
Sbjct: 1 MEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKP 60
Query: 111 GEDEIEGLKRLLSDTLGRRDGVKQ-EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHR 169
GE+E+EGLKR LS L Q +W + + + WWRPNFE YPY P HIT PKE +
Sbjct: 61 GENEVEGLKRKLSSKLAANSTTLQPDWQIGECVAVWWRPNFETLMYPYCPPHITKPKECK 120
Query: 170 RLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+LFLV L ER VPKN KL+A PL ELYDN Q YGP+IS++PQ L R
Sbjct: 121 KLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSR 169
>gi|367027876|ref|XP_003663222.1| hypothetical protein MYCTH_2304865 [Myceliophthora thermophila ATCC
42464]
gi|347010491|gb|AEO57977.1| hypothetical protein MYCTH_2304865 [Myceliophthora thermophila ATCC
42464]
Length = 265
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 124/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + ++ GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-----EWIVEDTIGNWWRPNF 150
+ FFKLPG L +DEIEG K L + L + + +W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEIEGFKARLDERLAPVGSLGEGNKAGDWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP HIT PKE ++L+ +QLP+ VPKN KL+A PL ELY+N+Q YGP +S
Sbjct: 151 ETFMYPFVPAHITRPKECKKLYFIQLPQTKVLSVPKNMKLLAVPLFELYENTQRYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|313238828|emb|CBY13829.1| unnamed protein product [Oikopleura dioica]
Length = 221
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 123/185 (66%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
++Y L NY F K+ + ++D RF R+++E+ G RR+V V++V EHGLPH L+L
Sbjct: 29 DVYSLGNYNFGTKEEMIDQDGMNDDRFDRLKEEYAATGTRRTVQAVIVVEEHGLPHFLLL 88
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDT-IGNWWRPNFEPP 153
QL FFKLPGG++ EDEI GLKR+L+ TL K +W +E T + WWRPNF
Sbjct: 89 QLNPNFFKLPGGQILPHEDEIAGLKRILTQTLSVPGNAKHDWQIEPTAVATWWRPNFSQN 148
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YP++P H+ PKE R++FLV+L +P+N+KLVAAP+ E+YDN GYGPII++LP
Sbjct: 149 LYPFMPAHVKHPKERRQVFLVRLTGSQQFAIPRNFKLVAAPIFEVYDNRDGYGPIIAALP 208
Query: 210 QALCR 214
L R
Sbjct: 209 TLLSR 213
>gi|367049622|ref|XP_003655190.1| hypothetical protein THITE_2118582 [Thielavia terrestris NRRL 8126]
gi|347002454|gb|AEO68854.1| hypothetical protein THITE_2118582 [Thielavia terrestris NRRL 8126]
Length = 265
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 124/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + ++ GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-----EWIVEDTIGNWWRPNF 150
+ FFKLPG L ++EIEG K L + L + + +W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDEEIEGFKARLDERLAPVGSLGEGNKAGDWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP HIT PKE ++L+ +QLPE VPKN KL+A PL ELY+N+Q YGP +S
Sbjct: 151 ETFMYPFVPAHITRPKECKKLYFIQLPETKVLSVPKNMKLLAVPLFELYENTQRYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|358399562|gb|EHK48899.1| hypothetical protein TRIATDRAFT_129286 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 127/200 (63%), Gaps = 9/200 (4%)
Query: 24 ISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV 83
+S N K LYPLSNYTF +K+ E+D SV AR +R+ + F + GMRR+ +G+L+
Sbjct: 19 LSFNANQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGILVC 78
Query: 84 HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIV 138
HEH PH+LMLQ+ FFKLPG L +DE+EG K L + L R G +E W V
Sbjct: 79 HEHNHPHILMLQIANAFFKLPGDYLKPEDDEVEGFKARLDERLAPVGRLGEGEEAGDWEV 138
Query: 139 EDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVEL 194
+ + WWRPNFE YP+VP H+T PKE ++ + +QLP+ VPKN KL+A PL EL
Sbjct: 139 GECLAQWWRPNFETFMYPFVPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPLFEL 198
Query: 195 YDNSQGYGPIISSLPQALCR 214
YDN+ YGP +S++P L R
Sbjct: 199 YDNTARYGPQLSAIPHILSR 218
>gi|310798453|gb|EFQ33346.1| cleavage and polyadenylation specificity factor subunit 5
[Glomerella graminicola M1.001]
Length = 269
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 124/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYNQHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIVEDTIGNWWRPNF 150
+ FFKLPG L +DE+EG K L + L R G +E W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPVGRIGEGEEPADWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YGP +S
Sbjct: 151 ETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|380478491|emb|CCF43569.1| cleavage and polyadenylation specificity factor subunit 5
[Colletotrichum higginsianum]
Length = 270
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 124/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYSQHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIVEDTIGNWWRPNF 150
+ FFKLPG L +DE+EG K L + L R G +E W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPXGRIGEGEEPADWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YGP +S
Sbjct: 151 ETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|281206750|gb|EFA80935.1| NUDIX hydrolase family protein [Polysphondylium pallidum PN500]
Length = 199
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 125/179 (69%), Gaps = 6/179 (3%)
Query: 42 YTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFF 101
Y+F K+P+ EKDSSV +R RM++ FEK G+R++V+ +++VH H PH+L+L++ TFF
Sbjct: 11 YSFGTKEPVKEKDSSVVSRLARMKENFEKEGLRKTVEAIIIVHNHNHPHILLLKIANTFF 70
Query: 102 KLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQE--WIVEDTIGNWWRPNFEPPQYPYVP 159
KLPGG+L GE+EI+GL R L+ L + W V + I WWRPNFE YPY+P
Sbjct: 71 KLPGGKLKPGENEIDGLIRKLTKKLSPIGTSVSDSPWEVGENIATWWRPNFEQILYPYIP 130
Query: 160 VHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
HIT PKE ++L++V LPE+ VP N +L+A PL E+Y+NSQ YG IISS+PQ + +
Sbjct: 131 PHITKPKECKKLYVVTLPEKCTFAVPSNLELIAVPLFEIYNNSQRYGAIISSIPQLISK 189
>gi|343427607|emb|CBQ71134.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 203
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 125/194 (64%), Gaps = 17/194 (8%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
L+P++ +TF K+ E+D SV AR QR+++ +E +GMRR+V+ VL+VHEH PHVLML
Sbjct: 6 TLHPVTAFTFTTKEAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHRHPHVLML 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--------------RRDGVKQEWIVED 140
Q+ FFKLPG L GEDE+EG+K L + LG R+ +W ++D
Sbjct: 66 QIANAFFKLPGDYLKPGEDEVEGIKARLDERLGPVESDPNSFGPNGEGRNKDNGDWEIQD 125
Query: 141 TIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPERVPKNYKLVAAPLVELYDNSQG 200
+ WWRPNFE YPY P H+T PKE ++LFLV VPKN KL+A PL ELYDNSQ
Sbjct: 126 CLAQWWRPNFETFMYPYAPPHVTKPKECKKLFLVLA---VPKNMKLLAVPLFELYDNSQR 182
Query: 201 YGPIISSLPQALCR 214
YGP ++++P L R
Sbjct: 183 YGPQLAAIPHLLSR 196
>gi|342879665|gb|EGU80905.1| hypothetical protein FOXB_08569 [Fusarium oxysporum Fo5176]
Length = 264
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 129/200 (64%), Gaps = 9/200 (4%)
Query: 24 ISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV 83
+S N K LYPLSNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+
Sbjct: 19 LSFNGNQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYTEHGMRRTCEGILVC 78
Query: 84 HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIV 138
HEH PH+LMLQ+ FFKLPG L +DEI+G K L + L R G +E W V
Sbjct: 79 HEHNHPHILMLQIANAFFKLPGDYLRPEDDEIQGFKSRLDERLAPVGRLGEGEEAGDWQV 138
Query: 139 EDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVEL 194
D + WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL EL
Sbjct: 139 GDCLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKQKVLSVPKNMKLLAVPLFEL 198
Query: 195 YDNSQGYGPIISSLPQALCR 214
YDN+ YGP +S++P L R
Sbjct: 199 YDNTARYGPQLSAIPHLLSR 218
>gi|429863433|gb|ELA37884.1| cleavage and polyadenylation specific factor 5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 267
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 124/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYNQHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIVEDTIGNWWRPNF 150
+ FFKLPG L +DE+EG K L + L R G +E W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPVGRIGEGEEPADWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YGP +S
Sbjct: 151 ETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|46125059|ref|XP_387083.1| hypothetical protein FG06907.1 [Gibberella zeae PH-1]
gi|408388256|gb|EKJ67942.1| hypothetical protein FPSE_11753 [Fusarium pseudograminearum CS3096]
Length = 264
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 129/200 (64%), Gaps = 9/200 (4%)
Query: 24 ISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV 83
+S N K LYPLSNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+
Sbjct: 19 LSFNGNQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYTEHGMRRTCEGILVC 78
Query: 84 HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIV 138
HEH PH+LMLQ+ FFKLPG L +DEI+G K L + L R G +E W V
Sbjct: 79 HEHNHPHILMLQIANAFFKLPGDYLRPEDDEIQGFKSRLDERLAPVGRLGEGEEAGDWQV 138
Query: 139 EDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVEL 194
D + WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL EL
Sbjct: 139 GDCLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKQKVLSVPKNMKLLAVPLFEL 198
Query: 195 YDNSQGYGPIISSLPQALCR 214
YDN+ YGP +S++P L R
Sbjct: 199 YDNTARYGPQLSAIPHLLSR 218
>gi|116207818|ref|XP_001229718.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183799|gb|EAQ91267.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 265
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 123/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + ++ GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-----EWIVEDTIGNWWRPNF 150
+ FFKLPG L +DE+EG K L + L + + +W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGSLGEGNKAADWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP HIT PKE ++L+ +QLP VPKN KL+A PL ELY+N+Q YGP +S
Sbjct: 151 ETFMYPFVPAHITRPKECKKLYFIQLPHSKVLSVPKNMKLLAVPLFELYENTQRYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|336268364|ref|XP_003348947.1| hypothetical protein SMAC_01968 [Sordaria macrospora k-hell]
gi|380094207|emb|CCC08424.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 264
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 124/192 (64%), Gaps = 9/192 (4%)
Query: 32 RKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHV 91
K LYPLSNYTF +K+ E+D SV AR +R+ + + GMRR+ +G+L+ HEH PH+
Sbjct: 27 EKIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYSAHGMRRTCEGILVCHEHNHPHI 86
Query: 92 LMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-----EWIVEDTIGNWW 146
LMLQ+ FFKLPG L +DEIEG K+ L + L + + +W V D + WW
Sbjct: 87 LMLQIANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGDWQVGDCLAQWW 146
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP+VP H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YG
Sbjct: 147 RPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 207 PQLSAIPHLLSR 218
>gi|336470088|gb|EGO58250.1| hypothetical protein NEUTE1DRAFT_82635 [Neurospora tetrasperma FGSC
2508]
gi|350290220|gb|EGZ71434.1| cleavage and polyadenylation specificity factor, 25 kDa subunit
[Neurospora tetrasperma FGSC 2509]
Length = 264
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 123/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-----EWIVEDTIGNWWRPNF 150
+ FFKLPG L +DEIEG K+ L + L + + +W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGDWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YGP +S
Sbjct: 151 ETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|85089870|ref|XP_958148.1| hypothetical protein NCU09014 [Neurospora crassa OR74A]
gi|28919478|gb|EAA28912.1| hypothetical protein NCU09014 [Neurospora crassa OR74A]
Length = 264
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 123/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ-----EWIVEDTIGNWWRPNF 150
+ FFKLPG L +DEIEG K+ L + L + + +W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGDWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YGP +S
Sbjct: 151 ETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|384247444|gb|EIE20931.1| cleavage and polyadenylation specificity factor, 25 kDa subunit
[Coccomyxa subellipsoidea C-169]
Length = 223
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 124/185 (67%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
+YP++NY F K EKD++V AR R ++++K G+RRSVD VLLV EH PHVL+L
Sbjct: 9 TIYPVANYNFGSKAAKTEKDTNVQARLSRWEEKYKKEGVRRSVDAVLLVWEHNHPHVLLL 68
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQEWIVEDTIGNWWRPNFEPP 153
QLGT+FFKLPGG L GEDE GL+R L + L + W + I +WRPNF+
Sbjct: 69 QLGTSFFKLPGGRLRPGEDEKMGLRRKLENNLSPEAASLAHPWDIGQCIATYWRPNFDMT 128
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YPY+P HIT PKE ++L+L+ LPE+ VP+N KL+A PL ELY+N+ +G +IS+LP
Sbjct: 129 LYPYLPAHITRPKEVKKLYLISLPEKCYLAVPRNAKLIAVPLFELYENTARFGMVISALP 188
Query: 210 QALCR 214
L R
Sbjct: 189 HILSR 193
>gi|402087049|gb|EJT81947.1| cleavage and polyadenylation specificity factor subunit 5
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 266
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 122/188 (64%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYSAHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIVEDTIGNWWRPNF 150
+ FFKLPG L +DE+EG K L + L R G +E W V D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAGDWQVGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP H+T PKE ++L+ +QLP VPKN KL+A PL ELYDNS YGP +S
Sbjct: 151 ETFMYPFVPAHVTRPKECKKLYFIQLPNSKVLSVPKNMKLLAVPLFELYDNSARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|452841703|gb|EME43640.1| hypothetical protein DOTSEDRAFT_54398 [Dothistroma septosporum
NZE10]
Length = 270
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 124/187 (66%), Gaps = 8/187 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D+SV R +R+ + +EK GMRRS + +L+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDASVKDRLKRLEEYYEKHGMRRSCEAILVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ----EWIVEDTIGNWWRPNFE 151
+ FFKLPG + DE+EG K L++ L + + +W V DTI W+RPNFE
Sbjct: 91 IANAFFKLPGDYIPHDVDEVEGFKDRLNERLAPTGSLAEKDDRDWNVFDTIAQWYRPNFE 150
Query: 152 PPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISS 207
YP++P H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDNSQ YGP +S+
Sbjct: 151 TFMYPFLPPHVTRPKECKKLYFIQLPKEKVLSVPKNMKLLAVPLFELYDNSQRYGPQLSA 210
Query: 208 LPQALCR 214
+P L R
Sbjct: 211 IPHYLSR 217
>gi|384491888|gb|EIE83084.1| hypothetical protein RO3G_07789 [Rhizopus delemar RA 99-880]
Length = 199
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 122/190 (64%), Gaps = 8/190 (4%)
Query: 33 KKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVL 92
K LYPL NYT K+ E+D+SV AR +R+ ++ + GMRRSV+ VL+VH+H PHVL
Sbjct: 3 KATLYPLENYTLSTKEAQPEEDTSVAARLRRLEADYNQHGMRRSVEAVLVVHQHNHPHVL 62
Query: 93 MLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV----KQEWIVEDTIGNWWRP 148
M Q+ +FFKLPG L DE EG+K +L+ LG D + + +W + + + WWRP
Sbjct: 63 MFQIANSFFKLPGHYLEPEVDEAEGMKEILNKKLGPEDPLEWDSQNDWTIGECLSTWWRP 122
Query: 149 NFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPI 204
N+E YPYVP H+TSPKE + L++V LP VPKN KL+A PL ELYDNS YG
Sbjct: 123 NYENYMYPYVPAHVTSPKEKKSLYIVHLPPNKVLSVPKNMKLLAVPLFELYDNSARYGAQ 182
Query: 205 ISSLPQALCR 214
+S++ L R
Sbjct: 183 LSTIAHLLSR 192
>gi|398393918|ref|XP_003850418.1| hypothetical protein MYCGRDRAFT_74666 [Zymoseptoria tritici IPO323]
gi|339470296|gb|EGP85394.1| hypothetical protein MYCGRDRAFT_74666 [Zymoseptoria tritici IPO323]
Length = 274
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 123/189 (65%), Gaps = 10/189 (5%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV R +R+ + ++K GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYDKHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSD------TLGRRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L DEIEG K L++ +L + +W V DT+ W+RPN
Sbjct: 91 IANAFFKLPGDYLPHDVDEIEGFKTRLNERLAPTGSLSTVEAADSDWDVADTLAQWYRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP VPKN KL+A PL ELYDN+Q YGP +
Sbjct: 151 FETFMYPFLPPHVTRPKECKKLYFIQLPRAKVLSVPKNMKLLAVPLFELYDNTQRYGPQL 210
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 211 SAIPHYLSR 219
>gi|389634023|ref|XP_003714664.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae 70-15]
gi|351646997|gb|EHA54857.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae 70-15]
gi|440474813|gb|ELQ43535.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae Y34]
gi|440487297|gb|ELQ67094.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae P131]
Length = 266
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 122/188 (64%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIVEDTIGNWWRPNF 150
+ FFKLPG L +DE+EG K L + L R G +E W + D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAGDWQIGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP+VP H+T PKE ++L+ +QLP VPKN KL+A PL ELYDNS YGP +S
Sbjct: 151 ETFMYPFVPAHVTRPKECKKLYFIQLPNSKVLSVPKNMKLLAVPLFELYDNSARYGPQLS 210
Query: 207 SLPQALCR 214
++P L +
Sbjct: 211 AIPHLLSK 218
>gi|378726618|gb|EHY53077.1| autocrine motility factor receptor [Exophiala dermatitidis
NIH/UT8656]
Length = 287
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 6/185 (3%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +G+L+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVAARLKRLEEHYEKYGMRRTCEGILVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVK--QEWIVEDTIGNWWRPNFEPP 153
+ FFKLPG L DEIEG K L++ L + + EW + D + WWRPN E
Sbjct: 91 IANAFFKLPGDYLPHDADEIEGFKMRLNERLAPTNPKEGDTEWEIGDCLAQWWRPNHETF 150
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YP++P H++ PKE ++L+L+ LP VPKN KL+A PL ELYDN+ YGP +S++P
Sbjct: 151 LYPFLPAHVSRPKELKKLYLIHLPPNKVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIP 210
Query: 210 QALCR 214
L R
Sbjct: 211 HYLSR 215
>gi|430812180|emb|CCJ30402.1| unnamed protein product [Pneumocystis jirovecii]
Length = 239
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 121/186 (65%), Gaps = 7/186 (3%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
+YPLSNY F K+ E+D SV +R R++ +EK GMRR+ +G+L+VHEH PH+LMLQ
Sbjct: 22 IYPLSNYVFSTKEAQPEEDPSVISRLDRLKSHYEKSGMRRTCEGILVVHEHNHPHILMLQ 81
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQE---WIVEDTIGNWWRPNFEP 152
+ FFKLPG L E EI+G L++ L E W + D + WWRPNFE
Sbjct: 82 IANAFFKLPGDYLQPNESEIQGFVARLNERLAPTTPESPEDTKWEIGDCLAQWWRPNFET 141
Query: 153 PQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIISSL 208
YP++P H+T PKE ++L+LV+LP+ VPKN KL+A PL ELYDNS YGP ++++
Sbjct: 142 FMYPFIPAHVTRPKECKKLYLVKLPKTKVLAVPKNMKLLAVPLFELYDNSARYGPQLAAI 201
Query: 209 PQALCR 214
PQ L +
Sbjct: 202 PQYLAK 207
>gi|302410621|ref|XP_003003144.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium albo-atrum VaMs.102]
gi|261358168|gb|EEY20596.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium albo-atrum VaMs.102]
Length = 268
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 122/188 (64%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYTQYGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV-----KQEWIVEDTIGNWWRPNF 150
+ FFKLPG L +DE EG K L + L + K +W + D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDESEGFKARLDERLAPVGRIGEGEEKGDWQLGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP++P H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YGP +S
Sbjct: 151 ETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|346971150|gb|EGY14602.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium dahliae VdLs.17]
Length = 268
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 122/188 (64%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYTQYGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV-----KQEWIVEDTIGNWWRPNF 150
+ FFKLPG L +DE EG K L + L + K +W + D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDESEGFKARLDERLAPVGRIGEGEEKGDWQLGDCLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP++P H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YGP +S
Sbjct: 151 ETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|414584721|tpg|DAA35292.1| TPA: hypothetical protein ZEAMMB73_890316 [Zea mays]
Length = 186
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 112/174 (64%), Gaps = 5/174 (2%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+LQ+
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQY 155
G TF KLPGG L GE+EIEGLKR L L W V + + WWRPNFE Y
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
PY P HIT PKE ++LF+V L ER VP+N KL+A PL ELYDN Q + I
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQEFVKIC 185
>gi|322707058|gb|EFY98637.1| cleavage and polyadenylation specific factor 5 [Metarhizium
anisopliae ARSEF 23]
Length = 264
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 126/200 (63%), Gaps = 13/200 (6%)
Query: 28 LQYNRKK----NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV 83
L +N K+ LYPLSNYTF +K+ E+D SV AR +R+ + F + GMRR+ +G+L+
Sbjct: 19 LDFNSKQPDKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGILVC 78
Query: 84 HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIV 138
HEH PH+LMLQ+ FFKLPG L +DE G K L + L R G +E W V
Sbjct: 79 HEHNHPHILMLQIANAFFKLPGDYLRPEDDEEAGFKARLDERLAPVGRIGEGEEAGDWEV 138
Query: 139 EDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVEL 194
D + WWRPNFE YP+VP H+T PKE ++L+ + LP+ VPKN KL+A PL EL
Sbjct: 139 GDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIHLPKTKVLSVPKNMKLLAVPLFEL 198
Query: 195 YDNSQGYGPIISSLPQALCR 214
YDN+ YGP +S++P L R
Sbjct: 199 YDNTARYGPQLSAIPHLLSR 218
>gi|322698980|gb|EFY90745.1| cleavage and polyadenylation specific factor 5 [Metarhizium acridum
CQMa 102]
Length = 264
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 126/200 (63%), Gaps = 13/200 (6%)
Query: 28 LQYNRKK----NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV 83
L +N K+ LYPLSNYTF +K+ E+D SV AR +R+ + F + GMRR+ +G+L+
Sbjct: 19 LDFNSKQPDKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFAEHGMRRTCEGILVC 78
Query: 84 HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIV 138
HEH PH+LMLQ+ FFKLPG L +DE G K L + L R G +E W V
Sbjct: 79 HEHNHPHILMLQIANAFFKLPGDYLRPEDDEEAGFKARLDERLAPVGRIGEGEEAGDWEV 138
Query: 139 EDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVEL 194
D + WWRPNFE YP+VP H+T PKE ++L+ + LP+ VPKN KL+A PL EL
Sbjct: 139 GDCLAQWWRPNFETFMYPFVPAHVTRPKECKKLYFIHLPKTKVLSVPKNMKLLAVPLFEL 198
Query: 195 YDNSQGYGPIISSLPQALCR 214
YDN+ YGP +S++P L R
Sbjct: 199 YDNTARYGPQLSAIPHLLSR 218
>gi|358387117|gb|EHK24712.1| hypothetical protein TRIVIDRAFT_30132 [Trichoderma virens Gv29-8]
Length = 264
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 126/197 (63%), Gaps = 9/197 (4%)
Query: 27 NLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEH 86
N + K LYPLSNYTF +K+ E+D SV AR +R+ + F + GMRR+ +G+L+ HEH
Sbjct: 22 NAKQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGILVCHEH 81
Query: 87 GLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIVEDT 141
PH+LMLQ+ FFKLPG L +DE+EG K L + L R G +E W V +
Sbjct: 82 NHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAGDWEVGEC 141
Query: 142 IGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDN 197
+ +WRPNFE YP++P H+T PKE ++ + +QLP+ VPKN KL+A PL ELYDN
Sbjct: 142 LAQFWRPNFETFMYPFIPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPLFELYDN 201
Query: 198 SQGYGPIISSLPQALCR 214
+ YGP +S++P L R
Sbjct: 202 TARYGPQLSAIPHLLSR 218
>gi|340522024|gb|EGR52257.1| predicted protein [Trichoderma reesei QM6a]
Length = 264
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 126/197 (63%), Gaps = 9/197 (4%)
Query: 27 NLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEH 86
N + K LYPLSNYTF +K+ E+D SV AR +R+ + F + GMRR+ +G+L+ HEH
Sbjct: 22 NAKQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFNEHGMRRTCEGILVCHEH 81
Query: 87 GLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIVEDT 141
PH+LMLQ+ FFKLPG L +DE+EG K L + L R G +E W V +
Sbjct: 82 NHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAGDWEVGEC 141
Query: 142 IGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDN 197
+ +WRPNFE YP++P H+T PKE ++ + +QLP+ VPKN KL+A PL ELYDN
Sbjct: 142 LAQFWRPNFETFMYPFIPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPLFELYDN 201
Query: 198 SQGYGPIISSLPQALCR 214
+ YGP +S++P L R
Sbjct: 202 TARYGPQLSAIPHLLSR 218
>gi|239792840|dbj|BAH72714.1| ACYPI005495 [Acyrthosiphon pisum]
Length = 145
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 96/107 (89%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
NR NLYPLSNY F K+PLFEKD SVPARFQRMRDEFEKIGMRRSV+GVL+VH+HGLPH
Sbjct: 39 NRHINLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPH 98
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
VL+LQLGTTFFKLPGGELN EDE+EGLKRLL++TLGR+DGV Q +
Sbjct: 99 VLLLQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLGRQDGVSQNGL 145
>gi|320586679|gb|EFW99349.1| cleavage and polyadenylation specific factor 5 [Grosmannia
clavigera kw1407]
Length = 265
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 123/188 (65%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF +K+ E+D SV AR +R+ + + GMRR+ +G+L+ HEH PH+LMLQ
Sbjct: 31 LYPLSNYTFGVKETQPEEDPSVVARLRRLEEHYTVHGMRRTCEGILVCHEHNHPHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQE---WIVEDTIGNWWRPNF 150
+ FFKLPG L ++E+EG K L + L R G +E W V + + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDEEVEGFKSRLDERLAPVGRLGEGEEAGDWQVGECLAQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP++P H+T PKE ++L+ +QLP+ VPKN KL+A PL ELYDN+ YGP +S
Sbjct: 151 ETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYGPQLS 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHLLSR 218
>gi|240277471|gb|EER40979.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
capsulatus H143]
Length = 269
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 123/183 (67%), Gaps = 14/183 (7%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVLVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQY 155
+ FFKLPG L+ +DE+EG K L++ L V ++ +WWRPNFE Y
Sbjct: 91 IANAFFKLPGDYLHHDDDEVEGFKTRLNERLAP---VGSQF-------SWWRPNFETFMY 140
Query: 156 PYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQA 211
P++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +S++P
Sbjct: 141 PFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHL 200
Query: 212 LCR 214
L R
Sbjct: 201 LSR 203
>gi|400599110|gb|EJP66814.1| cleavage and polyadenylation specificity factor subunit 5
[Beauveria bassiana ARSEF 2860]
Length = 265
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 123/191 (64%), Gaps = 9/191 (4%)
Query: 33 KKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVL 92
K +YP SNYTF +K+ E+D SV AR +R+ + F + GMRR+ +G+L+ HEH PH+L
Sbjct: 28 KVRVYPFSNYTFGVKETQPEEDPSVIARLKRLEEHFAEHGMRRTCEGILVCHEHNQPHIL 87
Query: 93 MLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTL---GR--RDGVKQEWIVEDTIGNWWR 147
MLQ+ FFKLPG L + EI+G K L + L GR D EW + + + WWR
Sbjct: 88 MLQIANAFFKLPGDYLRPEDGEIQGFKTRLDERLAPVGRLGEDEKDGEWEIGECLSQWWR 147
Query: 148 PNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGP 203
PNFE YP+VP H+T PKE ++++L+ LP+ VPKN KL+A PL ELY+NS YGP
Sbjct: 148 PNFETFMYPFVPAHVTRPKECKKIYLIHLPKNKVLSVPKNMKLLAVPLFELYENSGRYGP 207
Query: 204 IISSLPQALCR 214
+S++P L R
Sbjct: 208 QLSAIPHILSR 218
>gi|351703336|gb|EHB06255.1| Cleavage and polyadenylation specificity factor subunit 5
[Heterocephalus glaber]
Length = 209
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/117 (70%), Positives = 101/117 (86%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL EKDSSV ARFQRMR+EF++IGMRR+V+GVL+VH
Sbjct: 36 TKPLTLERSINLYPLTNYTFGTKEPLCEKDSSVAARFQRMREEFDRIGMRRAVEGVLIVH 95
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDT 141
EH LPHVL+LQLGTTFFKLPGGELN GEDE+EGLKRL+++ LGR+DG Q+W+++D
Sbjct: 96 EHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGALQDWVIDDC 152
>gi|425772729|gb|EKV11124.1| Cleavage and polyadenylation specific factor 5 [Penicillium
digitatum PHI26]
gi|425775148|gb|EKV13431.1| Cleavage and polyadenylation specific factor 5 [Penicillium
digitatum Pd1]
Length = 299
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 127/208 (61%), Gaps = 29/208 (13%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + + GMRR+ +G+L+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYGLHGMRRTCEGILVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKL-------------------PGGELNQGEDEIEGLKRLLSDTLG------RRD 130
+ FFKL PG L+ +DEIEG K+ L++ L +
Sbjct: 91 IANAFFKLQVLYCLYAFIHNPLLIVFRPGDYLHHEDDEIEGFKKRLNERLAPVGSQFSGE 150
Query: 131 GVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKL 186
GV +W + DT+ WWRPNFE YP++P H+T PKE ++L+ ++LP++ VPKN KL
Sbjct: 151 GVNDDWEISDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIRLPKKKVLSVPKNMKL 210
Query: 187 VAAPLVELYDNSQGYGPIISSLPQALCR 214
+A PL ELYDN+ YGP +S++P L R
Sbjct: 211 LAVPLFELYDNTARYGPQLSAIPHLLSR 238
>gi|328875182|gb|EGG23547.1| NUDIX hydrolase family protein [Dictyostelium fasciculatum]
Length = 203
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 127/182 (69%), Gaps = 7/182 (3%)
Query: 40 SNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTT 99
++Y+F IK+P+ EKD++V R RM++ F+K G R++V+ +++VHEH PH+L+LQ+ +
Sbjct: 11 TSYSFGIKEPVAEKDATVAQRLTRMKETFDKEGTRKTVESIIIVHEHNHPHILLLQMSNS 70
Query: 100 FFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQE--WIVEDTIGNWWRPNFEPPQ-YP 156
+FKLPGG+L GE+E++GL R L+ L + W + + + WWRP+FE YP
Sbjct: 71 YFKLPGGKLKPGENEVDGLIRKLTKKLSPIGTAPDDSPWEIGELVSTWWRPSFEQHTFYP 130
Query: 157 YVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQAL 212
Y+P HI+ PKE ++L++V LPE+ VP+N KL+A PL ELY+N Q YG +ISS+PQ +
Sbjct: 131 YIPPHISKPKECKKLYVVTLPEKCTFAVPQNLKLIAVPLFELYNNQQRYGSVISSIPQLI 190
Query: 213 CR 214
+
Sbjct: 191 SK 192
>gi|308807264|ref|XP_003080943.1| mRNA cleavage factor I subunit (ISS) [Ostreococcus tauri]
gi|116059404|emb|CAL55111.1| mRNA cleavage factor I subunit (ISS) [Ostreococcus tauri]
Length = 279
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 123/199 (61%), Gaps = 7/199 (3%)
Query: 23 LISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLL 82
++ + R +++ L NYTF K EKDSS AR RM+ ++E+ G RRSV + +
Sbjct: 75 VVGDASNFRRVVDVHALGNYTFGTKRARGEKDSSAAARLLRMKTQYEREGKRRSVGAICM 134
Query: 83 VHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQ-EWIVE 139
V +H PH+L+LQ+ T FKLPGG L GE E EGL R + + L R DG+ E+ V
Sbjct: 135 VSQHRTPHILLLQITPTTFKLPGGRLRAGEGEREGLARKMQNKLQPEREDGLGAYEFDVG 194
Query: 140 DTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELY 195
D + W+R +FEP YPY+P HIT PKE ++F+V LPE+ VPKN KL+A PL ELY
Sbjct: 195 DQVATWYRTSFEPQMYPYLPAHITKPKEEHKIFIVHLPEKAAFAVPKNLKLLAVPLFELY 254
Query: 196 DNSQGYGPIISSLPQALCR 214
N + YG I+S+P L R
Sbjct: 255 GNPEKYGSEIASIPHLLSR 273
>gi|145350060|ref|XP_001419441.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579672|gb|ABO97734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 120/187 (64%), Gaps = 7/187 (3%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
++Y LSNYTF K EKD++ R RMR ++EK G RRSV + +V +H PHVL+L
Sbjct: 13 DVYSLSNYTFGTKRARGEKDATAAERLLRMRAQYEKEGKRRSVGAICMVSQHRTPHVLLL 72
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--RRDGVKQ-EWIVEDTIGNWWRPNFE 151
Q+ T FKLPGG L GE ++EGL R + + L R DG++Q E+ + D + W+R ++E
Sbjct: 73 QITPTSFKLPGGRLRAGEGDVEGLARKMRNKLQPERDDGLEQYEFDIGDQVATWYRTSYE 132
Query: 152 PPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISS 207
P YPY+P HIT PKE R+F+ LPE+ VPKN KL+A PL ELY N YG I+S
Sbjct: 133 PQMYPYLPAHITKPKEEYRMFVAHLPEKCYFAVPKNLKLLAVPLFELYGNPGKYGAEIAS 192
Query: 208 LPQALCR 214
+P L R
Sbjct: 193 IPHLLSR 199
>gi|147796474|emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]
Length = 244
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 115/198 (58%), Gaps = 33/198 (16%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 43 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 102
Query: 95 QLGTTFFKLPGGELNQGED----------------------------EIEGLKRLLSDTL 126
Q+G TF KLPGG L GE+ EIEGLKR LS L
Sbjct: 103 QIGNTFCKLPGGRLKPGENGAILDPLLRLLCMCIHVCMSYFFLKIFAEIEGLKRKLSSKL 162
Query: 127 GRRD-GVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VP 181
++ +W + + + WWRPNFE YPY P HIT PKE ++LF+V L ER VP
Sbjct: 163 AANSLALQPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVP 222
Query: 182 KNYKLVAAPLVELYDNSQ 199
KN KL+A PL ELYDN Q
Sbjct: 223 KNLKLLAVPLFELYDNVQ 240
>gi|7269405|emb|CAB81365.1| putative protein [Arabidopsis thaliana]
Length = 209
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 116/191 (60%), Gaps = 26/191 (13%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLSNY+F K+P EKD+SV R RM+ ++ K GMR SV+G+LLV EH PH+L+L
Sbjct: 7 NTYPLSNYSFGTKEPKLEKDTSVADRLARMKIKYMKEGMRTSVEGILLVQEHNHPHILLL 66
Query: 95 QLGTTFFKLPGGELNQGED---------------EIEGLKRLLSDTL-GRRDGVKQEWIV 138
Q+G TF KLPGG L GE+ E +GLKR L+ L G + +W V
Sbjct: 67 QIGNTFCKLPGGRLKPGENGIQLPPVWVYYVVSAEADGLKRKLTSKLGGNSAALVPDWTV 126
Query: 139 EDTIGNWWRPNFEPPQYPYVPVHITSPK------EHRRLFLVQLPER----VPKNYKLVA 188
+ + WWRPNFE YPY P HIT PK E +RL++V L E+ VPKN KL+A
Sbjct: 127 GECVATWWRPNFETMMYPYCPPHITKPKVVKKHNECKRLYIVHLSEKEYFAVPKNLKLLA 186
Query: 189 APLVELYDNSQ 199
PL ELYDN Q
Sbjct: 187 VPLFELYDNVQ 197
>gi|2980795|emb|CAA18171.1| putative protein [Arabidopsis thaliana]
Length = 210
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 115/191 (60%), Gaps = 26/191 (13%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLSNY+F K+P EKD+SV R RM+ + K GMR SV+G+LLV EH PH+L+L
Sbjct: 8 NTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHILLL 67
Query: 95 QLGTTFFKLPGGELNQGED---------------EIEGLKRLLSDTL-GRRDGVKQEWIV 138
Q+G TF KLPGG L GE+ E +GLKR L+ L G + +W V
Sbjct: 68 QIGNTFCKLPGGRLKPGENGIQLPPFWVYYVVSAEADGLKRKLTSKLGGNSAALVPDWTV 127
Query: 139 EDTIGNWWRPNFEPPQYPYVPVHITSPK------EHRRLFLVQLPER----VPKNYKLVA 188
+ + WWRPNFE YPY P HIT PK E +RL++V L E+ VPKN KL+A
Sbjct: 128 GECVATWWRPNFETMMYPYCPPHITKPKVVKKHNECKRLYIVHLSEKEYFAVPKNLKLLA 187
Query: 189 APLVELYDNSQ 199
PL ELYDN Q
Sbjct: 188 VPLFELYDNVQ 198
>gi|428173402|gb|EKX42304.1| hypothetical protein GUITHDRAFT_88112 [Guillardia theta CCMP2712]
Length = 204
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 122/188 (64%), Gaps = 11/188 (5%)
Query: 35 NLYPLSNYTFDIK-DPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLM 93
N YPL Y K D EKD S +RF RM ++E+ G+RR+V+GVL+VH+H PHVL+
Sbjct: 12 NAYPLEQYKIGTKEDKDEEKDPS--SRFVRMEAKYEQEGLRRTVEGVLIVHQHKHPHVLL 69
Query: 94 LQLGT-TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQE---WIVEDTIGNWWRPN 149
LQ+G F+LPGG L GE E +GLKR L + L D ++E W V + + WWRPN
Sbjct: 70 LQVGAHQIFRLPGGRLRPGETEEDGLKRKLINKLAPPDFKEEEPLPWEVGEELATWWRPN 129
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPII 205
F+ QYPY+PVH+T PKE R+LFL+ LPE V KN+ LVA P ELYDN YGP+I
Sbjct: 130 FDSRQYPYLPVHVTRPKECRKLFLIHLPETCTFAVAKNHTLVAIPFYELYDNQDRYGPVI 189
Query: 206 SSLPQALC 213
SS+P L
Sbjct: 190 SSIPILLA 197
>gi|210076035|ref|XP_505412.2| YALI0F14421p [Yarrowia lipolytica]
gi|199424960|emb|CAG78221.2| YALI0F14421p [Yarrowia lipolytica CLIB122]
Length = 250
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 115/188 (61%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYP SNY F KD E+D SV AR QR++ +++ GM R V+GV L HE G P+V +LQ
Sbjct: 30 LYPSSNYVFATKDAQVERDVSVQARMQRLKSMYDESGMLRYVEGVFLCHEFGTPYVFLLQ 89
Query: 96 LGTTFFKLPGGELN-QGEDEIEGLKRLLSDTLGRRDGVKQE----WIVEDTIGNWWRPNF 150
L FFKLPG L+ EDE GL R L+D L +G QE W V D + WWRPNF
Sbjct: 90 LPNNFFKLPGEYLDPDEEDEEGGLLRKLADRLSPENGEDQENSKSWKVLDCLAQWWRPNF 149
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP++P HI+ PKE ++ FL+ LPE+ VP N +A PL ELYDN YGP +
Sbjct: 150 EVFMYPFLPPHISRPKECKKTFLISLPEKIAFFVPSNMTFLAVPLFELYDNPARYGPQLC 209
Query: 207 SLPQALCR 214
+LP L R
Sbjct: 210 ALPHYLSR 217
>gi|346324790|gb|EGX94387.1| cleavage and polyadenylation specific factor 5 [Cordyceps militaris
CM01]
Length = 266
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 121/188 (64%), Gaps = 9/188 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
+YP SNYTF +K+ E+D SV AR +R+ + + + GMRR+ +G+L+ HEH H+LMLQ
Sbjct: 31 VYPSSNYTFGVKETQPEEDPSVIARLRRLEEHYAEHGMRRTCEGILVCHEHNHAHILMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTL---GR--RDGVKQEWIVEDTIGNWWRPNF 150
+ FFKLPG L +DE +G K L + L GR D EW + D + WWRPNF
Sbjct: 91 IANAFFKLPGDYLRPEDDENDGFKVRLDERLAPVGRLGADEKPGEWEIGDCLSQWWRPNF 150
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
E YP++P HIT PKE ++++L+ LP+ VPKN KL+A PL ELY+NS YGP ++
Sbjct: 151 ETFMYPFLPAHITRPKECKKIYLIHLPKTKVLSVPKNMKLLAVPLFELYENSGRYGPQLA 210
Query: 207 SLPQALCR 214
++P L R
Sbjct: 211 AIPHILSR 218
>gi|224285141|gb|ACN40298.1| unknown [Picea sitchensis]
Length = 198
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 118/184 (64%), Gaps = 5/184 (2%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
++PLS Y+F K+ +KD + R RMR F + G+R V+G+LLV+E+G PH+L+LQ
Sbjct: 9 VHPLSCYSFGKKEAKVDKDIFLSDRLDRMRANFMRDGLRTYVEGILLVYEYGHPHLLLLQ 68
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTL-GRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
G +LPGG L GE+EIEGLKR L+ L V+ W + + G WWRPNFE
Sbjct: 69 KGNKIIRLPGGRLRPGENEIEGLKRKLTSKLSSSSSSVQPIWQIGECAGVWWRPNFETLM 128
Query: 155 YPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY P HI PKE +++F+V L E +PKN K++A PL EL+DN + YGP ISS+PQ
Sbjct: 129 YPYCPPHINKPKECKKIFIVHLSENQCFEIPKNLKILAVPLFELFDNVEKYGPEISSIPQ 188
Query: 211 ALCR 214
L R
Sbjct: 189 QLSR 192
>gi|255082171|ref|XP_002508304.1| predicted protein [Micromonas sp. RCC299]
gi|226523580|gb|ACO69562.1| predicted protein [Micromonas sp. RCC299]
Length = 221
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 120/193 (62%), Gaps = 10/193 (5%)
Query: 32 RKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHV 91
R ++YP+SNYTF K +KD++V R +D++EK GMRR+V+ +LLV++H PHV
Sbjct: 18 RAIHVYPVSNYTFGSKAAKADKDATVAEAMIRYKDKYEKEGMRRTVEAILLVNQHDHPHV 77
Query: 92 LMLQL----GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV--KQEWIVEDTIGNW 145
L+LQ G +KLPGG L GE E+ GL+R L + L + + W D + W
Sbjct: 78 LLLQRTMAGGGVEYKLPGGRLRHGEGEVAGLQRKLHNKLSPSEQSLRIEHWECGDCVARW 137
Query: 146 WRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGY 201
+RP FEP YPY+P H+T PKE R +++ QLPER VPKN KL+A PL E+Y N Y
Sbjct: 138 FRPAFEPNYYPYLPAHVTKPKESRTVYIAQLPERCKFCVPKNLKLLAVPLFEMYANEAKY 197
Query: 202 GPIISSLPQALCR 214
G + +S+P + R
Sbjct: 198 GAVAASVPYLISR 210
>gi|297738624|emb|CBI27869.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 119/189 (62%), Gaps = 5/189 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
N ++YPLS Y F KDPL K+ ++ R RM+ + + G R V V+LV PH
Sbjct: 95 NHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPH 154
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQEWIVEDTIGNWWRPN 149
+L+LQ+ +FFKLPGG L GE EI GLKR LS L DG +W V + +G WWRP+
Sbjct: 155 LLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPD 214
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YPY+P ++ +PKE +LFLV+LP VPKN KL+A PL +L++N + YGPII
Sbjct: 215 FETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPII 274
Query: 206 SSLPQALCR 214
+ +PQ L +
Sbjct: 275 AGVPQLLSK 283
>gi|225444838|ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Vitis vinifera]
Length = 284
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 119/189 (62%), Gaps = 5/189 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
N ++YPLS Y F KDPL K+ ++ R RM+ + + G R V V+LV PH
Sbjct: 88 NHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPH 147
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQEWIVEDTIGNWWRPN 149
+L+LQ+ +FFKLPGG L GE EI GLKR LS L DG +W V + +G WWRP+
Sbjct: 148 LLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPD 207
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YPY+P ++ +PKE +LFLV+LP VPKN KL+A PL +L++N + YGPII
Sbjct: 208 FETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPII 267
Query: 206 SSLPQALCR 214
+ +PQ L +
Sbjct: 268 AGVPQLLSK 276
>gi|432102773|gb|ELK30249.1| Cleavage and polyadenylation specificity factor subunit 5 [Myotis
davidii]
Length = 325
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 106/141 (75%), Gaps = 8/141 (5%)
Query: 9 PSNSTLVTVNRTINLIS-------KNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARF 61
P+N + + R +N S K L NLYPL+NYTF K+PL+E DSSV ARF
Sbjct: 5 PANRSQTSWPRGVNQFSNKYIQQTKPLTMEHTINLYPLTNYTFGTKEPLYE-DSSVAARF 63
Query: 62 QRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRL 121
Q MR+EF+KIGMRR+++GVL+VHEH LPHVL+LQLGTTFFK PG ELN GEDE+EGLKRL
Sbjct: 64 QCMREEFDKIGMRRTIEGVLIVHEHRLPHVLLLQLGTTFFKRPGDELNPGEDEVEGLKRL 123
Query: 122 LSDTLGRRDGVKQEWIVEDTI 142
+++ LGR+DGV Q+W ++D I
Sbjct: 124 MTEILGRQDGVLQDWAIDDCI 144
>gi|158286004|ref|XP_001687987.1| AGAP007242-PB [Anopheles gambiae str. PEST]
gi|157020261|gb|EDO64636.1| AGAP007242-PB [Anopheles gambiae str. PEST]
Length = 141
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 92/100 (92%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
++++ NR NLYPL+NYTF K+PLFEKD SVPARFQRMRDEF+KIGMRRSV+GVLLVH
Sbjct: 32 NQSMTLNRTINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVH 91
Query: 85 EHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSD 124
EHGLPHVL+LQLGTTFFKLPGGEL+ GEDE++GLKRLL++
Sbjct: 92 EHGLPHVLLLQLGTTFFKLPGGELSAGEDEVDGLKRLLTE 131
>gi|312073725|ref|XP_003139649.1| pre-mRNA cleavage factor [Loa loa]
gi|307765185|gb|EFO24419.1| pre-mRNA cleavage factor [Loa loa]
Length = 228
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 121/191 (63%), Gaps = 17/191 (8%)
Query: 36 LYPLSNYTF---DIKDP--LFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
LYPL+NY+ D +DP +F+ S+ ++R E+E GM R+V GVLL H++ + H
Sbjct: 36 LYPLTNYSVRSNDYEDPPRIFDYKQSL-----KLRQEYENDGMVRTVQGVLLGHQNSIIH 90
Query: 91 VLMLQLGTTFF---KLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWR 147
VL+L+ G KLP L GEDEI G+KRL+++ LG D V ++ WWR
Sbjct: 91 VLLLKNGVGQMQSSKLPEVTLYHGEDEIAGMKRLMAEVLGFEDAVDAVCQIQHIAAKWWR 150
Query: 148 PNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGP 203
PNFE P YPY+P HIT PKE R+F+V+LP++ + KN LVAAP+ E+YDN GYGP
Sbjct: 151 PNFEAPIYPYIPSHITKPKEMIRVFVVELPKKATFTIAKNNTLVAAPVFEIYDNVNGYGP 210
Query: 204 IISSLPQALCR 214
II+SLP L R
Sbjct: 211 IIASLPHVLGR 221
>gi|189210068|ref|XP_001941366.1| cleavage and polyadenylation specificity factor subunit 5
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977459|gb|EDU44085.1| cleavage and polyadenylation specificity factor subunit 5
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 261
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 122/204 (59%), Gaps = 26/204 (12%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I K+ N+ K L+PLSNYTF KD E+D SV AR +R+ + + + GMRR+ +G+
Sbjct: 16 VIPKDFNGNQPKTIRLFPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYAEHGMRRTCEGI 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L+ + FFKLPG L +DEIEG K L++ L +GV
Sbjct: 76 LIAN--------------AFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVND 121
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAP 190
EW+V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP VPKN KL+A P
Sbjct: 122 EWVVGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVP 181
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 182 LFELYDNTARYGPQLSAIPHLLSR 205
>gi|392575279|gb|EIW68413.1| hypothetical protein TREMEDRAFT_63582 [Tremella mesenterica DSM
1558]
Length = 224
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 122/191 (63%), Gaps = 16/191 (8%)
Query: 38 PLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLG 97
P+ NYT ++ E+DSSV AR QR+ ++ + GMRRSV+GV++V EHG PHVL+LQ+
Sbjct: 10 PMQNYTLIEREAQAEEDSSVSARMQRLEKQYAETGMRRSVEGVMVVMEHGFPHVLVLQVA 69
Query: 98 TTFFKLPGGELNQGEDEIEGLKRLLSDTLG----------RRDGVKQEWIVEDTIGNWWR 147
F+KLPGG L+ E + EGL +++ LG +DG ++W V + + WWR
Sbjct: 70 NGFYKLPGGYLDPTEPDGEGLLARMNEQLGVPLPDGGYVRSKDG--KDWTVGECLSIWWR 127
Query: 148 PNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGP 203
PNF+ YPY+P H++ PKE R+L++V LP + +P N KL+A P+ E YDN+ +GP
Sbjct: 128 PNFDTFSYPYLPAHVSFPKECRKLYMVNLPVKKTLAIPANMKLIALPVYEFYDNASRWGP 187
Query: 204 IISSLPQALCR 214
++ LP + +
Sbjct: 188 QLAGLPYIMSK 198
>gi|259480797|tpe|CBF73767.1| TPA: cleavage and polyadenylation specific factor 5
(AFU_orthologue; AFUA_5G02030) [Aspergillus nidulans
FGSC A4]
Length = 275
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 118/188 (62%), Gaps = 14/188 (7%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +G+L+ HEH PHVLMLQ
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGILVCHEHNHPHVLMLQ 90
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L +DEIEG KR L++ L +GV ++W + DT+ WWRPN
Sbjct: 91 IANAFFKLPGDYLLHDDDEIEGFKRRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWWRPN 150
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER---VPKNYKLVAAPLVELYDNSQGYGPIIS 206
FE ++ + S H L +++ VPKN KL+A PL ELYDN+Q YGP +S
Sbjct: 151 FE----TFIKDQM-SLVGHDMLMCLRVAAEVLSVPKNMKLLAVPLFELYDNNQRYGPQLS 205
Query: 207 SLPQALCR 214
S+P L R
Sbjct: 206 SIPHLLSR 213
>gi|67902116|ref|XP_681314.1| hypothetical protein AN8045.2 [Aspergillus nidulans FGSC A4]
gi|40740477|gb|EAA59667.1| hypothetical protein AN8045.2 [Aspergillus nidulans FGSC A4]
Length = 297
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 118/188 (62%), Gaps = 14/188 (7%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +EK GMRR+ +G+L+ HEH PHVLMLQ
Sbjct: 53 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGILVCHEHNHPHVLMLQ 112
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L +DEIEG KR L++ L +GV ++W + DT+ WWRPN
Sbjct: 113 IANAFFKLPGDYLLHDDDEIEGFKRRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWWRPN 172
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER---VPKNYKLVAAPLVELYDNSQGYGPIIS 206
FE ++ + S H L +++ VPKN KL+A PL ELYDN+Q YGP +S
Sbjct: 173 FE----TFIKDQM-SLVGHDMLMCLRVAAEVLSVPKNMKLLAVPLFELYDNNQRYGPQLS 227
Query: 207 SLPQALCR 214
S+P L R
Sbjct: 228 SIPHLLSR 235
>gi|224087967|ref|XP_002308275.1| predicted protein [Populus trichocarpa]
gi|222854251|gb|EEE91798.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 18 NRTINLISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
+ ++ + N + +YPL +Y F KDP+ +D ++ R QRM+ F G+R SV
Sbjct: 3 DHSVTVTDNNNHQSTVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFSARGLRTSV 62
Query: 78 DGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI 137
V+LV PH+L+LQ+ FFKLPGG L GE +I+GL+R LS L + W
Sbjct: 63 QAVMLVELFKHPHLLLLQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVNEDETDHWE 122
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVE 193
V D +G WWR +FE YPY+P ++ PKE +L++V+LP VPKN KL+A PL +
Sbjct: 123 VGDCLGMWWRSDFETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQ 182
Query: 194 LYDNSQGYGPIISSLPQALCR 214
+++N + YGP+IS +PQ L +
Sbjct: 183 VHENHKTYGPVISGVPQLLSK 203
>gi|361128593|gb|EHL00525.1| putative Cleavage and polyadenylation specificity factor subunit 5
[Glarea lozoyensis 74030]
Length = 218
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 108/166 (65%), Gaps = 10/166 (6%)
Query: 59 ARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGL 118
AR +R+ + + GMRR+ +G+L+ HEH PH+LMLQ+ FFKLPG L ++EI G
Sbjct: 2 ARLKRLEEHYINHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLKPEDEEISGF 61
Query: 119 KRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLF 172
K L++ L +GV +EW + DT+ WWRPNFE YP++P H+T PKE ++L+
Sbjct: 62 KERLNERLAPVGSQFSGEGVNEEWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLY 121
Query: 173 LVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+QLP + VPKN KL+A PL ELYDN+ YGP +S++P L R
Sbjct: 122 FIQLPRQKVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSR 167
>gi|330846152|ref|XP_003294914.1| hypothetical protein DICPUDRAFT_160005 [Dictyostelium purpureum]
gi|325074528|gb|EGC28564.1| hypothetical protein DICPUDRAFT_160005 [Dictyostelium purpureum]
Length = 200
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 111/165 (67%), Gaps = 7/165 (4%)
Query: 56 SVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEI 115
SV ++ R+++ +EK G RR+V+G+++VH+HG PH+L+LQ ++FKLPGG+L GE+++
Sbjct: 27 SVTSKLTRLKESYEKEGQRRAVEGIIIVHDHGHPHILLLQ-DNSYFKLPGGKLKPGENDV 85
Query: 116 EGLKRLLSDTLG--RRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFL 173
EGL R L+ L W + D + WWRPNFEP YPY+P HIT PKE +++F+
Sbjct: 86 EGLIRKLTKKLSPTGTSVADSPWEIGDHVSTWWRPNFEPTLYPYIPTHITKPKECKKMFV 145
Query: 174 VQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
V LPE+ V L+A L E+Y+NSQ YGP+ISS+P + +
Sbjct: 146 VTLPEKCKFAVSNELSLIAVSLYEIYNNSQRYGPVISSIPALISK 190
>gi|406698531|gb|EKD01766.1| hypothetical protein A1Q2_03829 [Trichosporon asahii var. asahii
CBS 8904]
Length = 237
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 122/190 (64%), Gaps = 16/190 (8%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
+L+P+ NYTF E+DSSV R +R++D++++ GMRRSVD V++ H+HG+P +
Sbjct: 18 DLHPVQNYTFLNTSVQPEEDSSVAERMRRLQDQYDETGMRRSVDAVIVCHDHGVPCIFTF 77
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ------EWIVEDTIGNWWRP 148
Q+ FFKLPGG L+ ED++EG+ RLL + LG G KQ W V + W+RP
Sbjct: 78 QIANDFFKLPGGYLDPSEDDVEGISRLLEEFLGT--GSKQWRSDQPNWTVRSLLAVWYRP 135
Query: 149 NFEPPQYPYVPVHITSPKEHRRLFLVQL-PER---VPKNYKLVAAPLVELYDNSQGYGPI 204
NF+ + P H++ PKE R++FLV + PE+ VP N KL+A P+ E YDN+Q YGP
Sbjct: 136 NFD----GFFPAHVSMPKECRKIFLVTMAPEQMLGVPLNMKLLAIPIHEFYDNTQRYGPQ 191
Query: 205 ISSLPQALCR 214
+S++P L R
Sbjct: 192 LSAIPHLLSR 201
>gi|401886579|gb|EJT50606.1| hypothetical protein A1Q1_08158 [Trichosporon asahii var. asahii
CBS 2479]
Length = 237
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 122/190 (64%), Gaps = 16/190 (8%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
+L+P+ NYTF E+DSSV R +R++D++++ GMRRSVD V++ H+HG+P +
Sbjct: 18 DLHPVQNYTFLNTSVQPEEDSSVAERMRRLQDQYDETGMRRSVDAVIVCHDHGVPCIFTF 77
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ------EWIVEDTIGNWWRP 148
Q+ FFKLPGG L+ ED++EG+ RLL + LG G KQ W V + W+RP
Sbjct: 78 QIANDFFKLPGGYLDPSEDDVEGISRLLEEFLGT--GSKQWRSDQPNWTVRSLLAVWYRP 135
Query: 149 NFEPPQYPYVPVHITSPKEHRRLFLVQL-PER---VPKNYKLVAAPLVELYDNSQGYGPI 204
NF+ + P H++ PKE R++FLV + PE+ VP N KL+A P+ E YDN+Q YGP
Sbjct: 136 NFD----GFFPAHVSMPKECRKIFLVTMTPEQMLGVPLNMKLLAIPIHEFYDNTQRYGPQ 191
Query: 205 ISSLPQALCR 214
+S++P L R
Sbjct: 192 LSAIPHLLSR 201
>gi|303279404|ref|XP_003058995.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460155|gb|EEH57450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 119/196 (60%), Gaps = 13/196 (6%)
Query: 32 RKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHV 91
R ++YP++NY+F K KD++ A R+R+ +E+ G RRSVD V+LV++H PHV
Sbjct: 9 RTMHVYPVTNYSFGQKAGRAAKDATPSATATRLREAYERDGPRRSVDAVMLVNQHNTPHV 68
Query: 92 LMLQLGTT------FFKLPGGELNQGEDEIEGLKRLLSDTLGRRD---GVKQEWIVEDTI 142
L+LQ + F+LPGG L +GE E+EGL+R L L D G +EW D +
Sbjct: 69 LLLQSAGSGPGAPATFRLPGGRLRRGEGELEGLQRKLHSKLSPSDASLGGAKEWETGDCL 128
Query: 143 GNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNS 198
W RP + YPY+P H T PKE R ++ VQLPE+ VPK+ KL+A PL ELY N
Sbjct: 129 ARWHRPAHDAHFYPYLPTHATRPKEARAVYAVQLPEKCKFAVPKSLKLLAVPLFELYGNE 188
Query: 199 QGYGPIISSLPQALCR 214
+ YG ++SS+P + R
Sbjct: 189 KRYGAVVSSIPYLISR 204
>gi|66825117|ref|XP_645913.1| NUDIX hydrolase family protein [Dictyostelium discoideum AX4]
gi|74858879|sp|Q55E68.1|CPSF5_DICDI RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|60474098|gb|EAL72035.1| NUDIX hydrolase family protein [Dictyostelium discoideum AX4]
Length = 200
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 112/165 (67%), Gaps = 7/165 (4%)
Query: 56 SVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEI 115
S+ ++ R++D +EK G+R++V+G++++H+HG PH+L+LQ +FKLPGG+L GE+EI
Sbjct: 28 SLTSKLARLKDSYEKEGLRKAVEGIIIIHDHGHPHILLLQ-DNNYFKLPGGKLKPGENEI 86
Query: 116 EGLKRLLSDTLGRRDGVKQE--WIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFL 173
+GL R L+ L + W + D + WWRPNFEP +PY+P HIT PKE ++LF+
Sbjct: 87 DGLIRKLTKKLSPTGTPVSDAPWEIGDHVSTWWRPNFEPSLFPYIPSHITKPKECKKLFV 146
Query: 174 VQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
V LPE+ V N L+A L E+Y+NSQ YG +ISS+P + R
Sbjct: 147 VTLPEKCKFAVSNNLSLIAVSLYEIYNNSQRYGAVISSIPALISR 191
>gi|18417474|ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|20147173|gb|AAM10303.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|21554114|gb|AAM63194.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gi|332660282|gb|AEE85682.1| CFIM-25-like protein [Arabidopsis thaliana]
Length = 222
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 116/185 (62%), Gaps = 5/185 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
+LYPLS+Y F K+ L KD + R R++ + G+R V+ VLLV PHVL+L
Sbjct: 30 DLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVLLL 89
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQE-WIVEDTIGNWWRPNFEPP 153
Q + FKLPGG L GE +IEGLKR L+ L + V + V + IG WWRPNFE
Sbjct: 90 QYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGECIGMWWRPNFETL 149
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YP++P +I PKE +LFLV+LP VPKN+KL+A PL +L++N + YGPI+S +P
Sbjct: 150 MYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYGPIMSQIP 209
Query: 210 QALCR 214
+ L +
Sbjct: 210 KLLSK 214
>gi|402576636|gb|EJW70594.1| pre-mRNA cleavage factor [Wuchereria bancrofti]
Length = 92
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 84/91 (92%)
Query: 64 MRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLS 123
MR+E+EKIGMRRSV+GVLLVHEH LPHVL+LQ+GTTFFKLPGGELN GEDE+EGLKRLL+
Sbjct: 1 MREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEVEGLKRLLT 60
Query: 124 DTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
+TLGR+DG K W +ED IGNWWRPNF+PP+
Sbjct: 61 ETLGRQDGAKDLWTIEDVIGNWWRPNFDPPR 91
>gi|297799004|ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata]
gi|297313222|gb|EFH43645.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 115/184 (62%), Gaps = 5/184 (2%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLS+Y F +D L KD + R R++ + G+R V+ VLLV PHVL+LQ
Sbjct: 32 LYPLSSYYFSSRDALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELLKHPHVLLLQ 91
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWI-VEDTIGNWWRPNFEPPQ 154
+ FKLPGG L GE +IEG+KR L+ L + V + V + IG WWRPNFE
Sbjct: 92 YRNSIFKLPGGRLRPGESDIEGVKRKLASKLSVNENVVVPGLEVGECIGMWWRPNFETLM 151
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YP++P ++ PKE +LFLV+LP VPKN+KL+A PL +L++N + YGPIIS +P+
Sbjct: 152 YPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQLHENEKTYGPIISQIPK 211
Query: 211 ALCR 214
L +
Sbjct: 212 LLSK 215
>gi|255546065|ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
gi|223546548|gb|EEF48046.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
Length = 214
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 117/184 (63%), Gaps = 5/184 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
++YPLS Y F KDPL +D ++ R QRM+ + G+R V+ V+LV PH+L+L
Sbjct: 24 DIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILVELFKHPHLLLL 83
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
Q+ + FKLPGG + GE +I GLKR LS L + +W V + +G WWRP+FE
Sbjct: 84 QIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNNQD-QTDWEVGECLGMWWRPDFETLL 142
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY+P ++ +PKE +LFLV+LP VPKN KL+A PL +++DN + YG IIS +PQ
Sbjct: 143 YPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDNHKTYGGIISGVPQ 202
Query: 211 ALCR 214
L +
Sbjct: 203 LLSK 206
>gi|154300626|ref|XP_001550728.1| hypothetical protein BC1G_10901 [Botryotinia fuckeliana B05.10]
Length = 204
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 102/152 (67%), Gaps = 10/152 (6%)
Query: 73 MRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG----- 127
MRR+ +G+L+ HEH PH+LMLQ+ FFKLPG L +DE+EG K+ L++ L
Sbjct: 1 MRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQ 60
Query: 128 -RRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPK 182
+GV +EW + DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP + VPK
Sbjct: 61 FSGEGVNEEWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPK 120
Query: 183 NYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
N KL+A PL ELYDN+ YGP +S++P L R
Sbjct: 121 NMKLLAVPLFELYDNTARYGPQLSAIPHLLSR 152
>gi|449446606|ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
Length = 217
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 9/187 (4%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
++YPLSNY F K+PL KD ++ R RM+ + G+R V+ V+LV PH+L+
Sbjct: 25 DIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLLF 84
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTL---GRRDGVKQEWIVEDTIGNWWRPNFE 151
Q+ + FKLPGG + E +I+GL R L+ L G D W V + +G WWRP+FE
Sbjct: 85 QIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASDA--SHWEVSECLGMWWRPDFE 142
Query: 152 PPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISS 207
+PY+ ++ KE +LFLV+LPE VPKN KL+A PL ++++N + YGPIIS
Sbjct: 143 TLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISG 202
Query: 208 LPQALCR 214
+PQ L +
Sbjct: 203 IPQLLSK 209
>gi|115443272|ref|XP_001218443.1| hypothetical protein ATEG_09821 [Aspergillus terreus NIH2624]
gi|114188312|gb|EAU30012.1| hypothetical protein ATEG_09821 [Aspergillus terreus NIH2624]
Length = 195
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 110/177 (62%), Gaps = 20/177 (11%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GVL+ HEH PHVLMLQ
Sbjct: 15 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQHGMRRTCEGVLVCHEHNHPHVLMLQ 74
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ FFKLPG L+ ++EI+G K+ L++ L +GV ++W + DTI WWRPN
Sbjct: 75 IANAFFKLPGDYLHFEDEEIDGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTIAQWWRPN 134
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPERV--------------PKNYKLVAAPLV 192
FE YP++P H+T PKE ++L+ +QLP++ PK Y+ P V
Sbjct: 135 FETFMYPFLPGHVTRPKECKKLYFIQLPKKSGCLSTHGVGGGPLRPKEYEAPGGPAV 191
>gi|225679184|gb|EEH17468.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides brasiliensis Pb03]
Length = 262
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 114/189 (60%), Gaps = 26/189 (13%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GVLL+
Sbjct: 31 LYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLLL------------ 78
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPN 149
+ PG L+ +DE+EG K L++ L GV EW + DT+ WWRPN
Sbjct: 79 ----IYGRPGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDEWEIGDTLAQWWRPN 134
Query: 150 FEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPII 205
FE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +
Sbjct: 135 FETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQL 194
Query: 206 SSLPQALCR 214
S++P L R
Sbjct: 195 SAIPHLLSR 203
>gi|290983965|ref|XP_002674698.1| nudix motif 21-like protein [Naegleria gruberi]
gi|284088290|gb|EFC41954.1| nudix motif 21-like protein [Naegleria gruberi]
Length = 205
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 115/187 (61%), Gaps = 11/187 (5%)
Query: 39 LSNYTF---DIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
+ +YTF K+P EKD SVP R +R+ + + GM+R+V+ + V+ HG PH+++L+
Sbjct: 9 IYDYTFIKWTKKNPQVEKDKSVPERLKRLENNYLTHGMKRTVEAAIAVNIHGHPHIMLLR 68
Query: 96 LGTT---FFKLPGGELNQGEDEIEGLKRLLSDTLGRRD--GVKQEWIVEDTIGNWWRPNF 150
+G + F KLPGG + E E E LKR L+ L D + EWIV + W+RPNF
Sbjct: 69 IGNSQKGFHKLPGGRCRRDETEEECLKRKLTKRLAPEDPNEIMPEWIVHGVVSVWYRPNF 128
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPERV---PKNYKLVAAPLVELYDNSQGYGPIISS 207
E YPY+P HIT PKE + ++LV +PE P+NY + P +LY+NS+ +G IISS
Sbjct: 129 ENSFYPYLPAHITKPKERKLIYLVTIPECTIAYPRNYDFIPMPFFDLYENSKKFGSIISS 188
Query: 208 LPQALCR 214
LPQ + +
Sbjct: 189 LPQVISK 195
>gi|402587186|gb|EJW81121.1| hypothetical protein WUBG_07970 [Wuchereria bancrofti]
Length = 258
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 119/191 (62%), Gaps = 17/191 (8%)
Query: 36 LYPLSNYTF---DIKDP--LFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
LYPL+NY+ D +DP +F+ S+ ++R ++E GM R+V GVLL H++ + H
Sbjct: 28 LYPLTNYSVQNNDYEDPPRIFDYKQSL-----KLRQQYENNGMIRTVQGVLLGHQNSIIH 82
Query: 91 VLMLQLGTTFF---KLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWR 147
VL+L+ G KLP L EDEI+G+KRL+++ +G +D + ++ WWR
Sbjct: 83 VLLLKNGIGQIQSSKLPEVTLYNSEDEIDGMKRLMAEVMGFKDTAEAVCQIQHVAAKWWR 142
Query: 148 PNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGP 203
PNFE YPY+P HIT PKE ++F+V+LPE+ + KN LVAAP+ E+Y+N YG
Sbjct: 143 PNFEASIYPYIPSHITKPKEMIKVFVVELPEQTTFTIAKNNALVAAPVFEIYNNISNYGH 202
Query: 204 IISSLPQALCR 214
II+SLP L R
Sbjct: 203 IIASLPHVLGR 213
>gi|388493122|gb|AFK34627.1| unknown [Medicago truncatula]
Length = 205
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 117/185 (63%), Gaps = 10/185 (5%)
Query: 35 NLYPLSNYTFDIK-DPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLM 93
N+YPL++Y F K D + KD S+ QR + ++ GMR V+ V++V PH+L+
Sbjct: 18 NIYPLNSYYFGSKEDAIPSKDHSL----QRFKSNYDARGMRTCVEAVMMVELFKHPHLLL 73
Query: 94 LQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPP 153
Q+ + FKLPGG L GE + +GLKR L+ L + + EW V + +G WWRP+FE
Sbjct: 74 FQIKNSIFKLPGGRLRPGESDTDGLKRKLARKLSADENL-AEWEVGECLGMWWRPDFETS 132
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLP 209
YP++P ++ PKE +LFLV+LPE VPKN KL++ PL ++ DN + YGPIIS++P
Sbjct: 133 MYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSVPLCQIRDNHKTYGPIISAVP 192
Query: 210 QALCR 214
Q L +
Sbjct: 193 QLLSK 197
>gi|71012907|ref|XP_758540.1| hypothetical protein UM02393.1 [Ustilago maydis 521]
gi|46098198|gb|EAK83431.1| hypothetical protein UM02393.1 [Ustilago maydis 521]
Length = 258
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 120/248 (48%), Gaps = 70/248 (28%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
LYP++ +TF KD E+D SV AR QR+++ +E +GMRR+V+ VL+VHEHG PHVLML
Sbjct: 6 TLYPVTAFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPHVLML 65
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--------------RRDGVKQEWIVED 140
Q+ FFKLPG L GEDE+EG+K L + LG R+ +W ++D
Sbjct: 66 QIANAFFKLPGDYLKPGEDEVEGIKARLDERLGPVESDPNSFGPNGEGRNKDDGDWEIQD 125
Query: 141 TIGNWWRPNFEPPQYPYVPVHITS-----------PKEHRRLFLVQLPE----------- 178
+ WWRPNFE + V V T+ P+ H V P
Sbjct: 126 CLAQWWRPNFE--TFMTVSVCTTTCHQAERVQEALPRHHSTYQYVSTPSALTSQFPLSEI 183
Query: 179 --------------------------------RVPKNYKLVAAPLVELYDNSQGYGPIIS 206
VPKN KL+A PL ELYDNSQ YGP ++
Sbjct: 184 THSHSTRPICLLADLHVLANPSAFSLRHAEVLAVPKNMKLLAVPLFELYDNSQRYGPQLA 243
Query: 207 SLPQALCR 214
++P L R
Sbjct: 244 AIPHLLSR 251
>gi|170589621|ref|XP_001899572.1| pre-mrna cleavage factor [Brugia malayi]
gi|158593785|gb|EDP32380.1| pre-mrna cleavage factor, putative [Brugia malayi]
Length = 220
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 119/191 (62%), Gaps = 17/191 (8%)
Query: 36 LYPLSNYTF---DIKDP--LFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
LYPL+NY+ D +DP +F+ S+ ++R ++E GM R+V GVLL H++ + H
Sbjct: 28 LYPLTNYSVQNNDYEDPPQIFDYKQSL-----KLRQQYENNGMIRTVQGVLLGHQNSIIH 82
Query: 91 VLMLQLGTTFF---KLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWR 147
VL+L+ G KLP L EDEI+G+KRL+++ +G +D + ++ WWR
Sbjct: 83 VLLLKNGVGQIQSSKLPEVTLYNSEDEIDGMKRLMAEVMGFKDTAEAVCQIQHVAAKWWR 142
Query: 148 PNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGP 203
PNFE YPY+P HIT PKE ++F+V+LP++ + KN L+AAP+ E+Y+N YG
Sbjct: 143 PNFEESIYPYIPSHITKPKEMIKVFVVELPKQTTFTIAKNNALIAAPVFEIYNNISNYGH 202
Query: 204 IISSLPQALCR 214
II+SLP L R
Sbjct: 203 IIASLPHVLGR 213
>gi|363807126|ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
gi|255640824|gb|ACU20695.1| unknown [Glycine max]
Length = 216
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 112/177 (63%), Gaps = 5/177 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
++YPLS+Y F KD + KD ++ R RM+ + G+R V+ VLLV PH+L+L
Sbjct: 29 DIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLVELFKHPHLLLL 88
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQEWIVEDTIGNWWRPNFEPP 153
Q+ + +KLPGG L GE + +GLKR L+ L DG EW V + +G WWRP+FE
Sbjct: 89 QIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSVNEDGDGSEWEVGECLGMWWRPDFETL 148
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
YP++P ++ PKE ++FLV+LPE VPKN +++A PL ++++N + YG IIS
Sbjct: 149 MYPFIPPNVEKPKECTKVFLVKLPESRKLIVPKNMRVLAVPLCQVHENHKTYGQIIS 205
>gi|452825717|gb|EME32712.1| hypothetical protein Gasu_00780 [Galdieria sulphuraria]
Length = 226
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
NLY + NYTF K ++ P QR+++++++ G+R SV GVLLVH H PHVL+L
Sbjct: 38 NLYKVDNYTFGTKQASQKQHERNP---QRLKEKYQERGLRHSVAGVLLVHHHRHPHVLVL 94
Query: 95 QL--GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEP 152
Q F LPGG L GE ++EGL R L + L + W V D + WW P+F
Sbjct: 95 QRTKDAGSFWLPGGRLRPGEGDLEGLSRKLDNRLKSPSQERSHWEVGDFLATWWYPDFSD 154
Query: 153 PQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIISSL 208
+YPY+P H+T PKE L+LVQLPE VP + +L+A PL ++++N++ YG +ISSL
Sbjct: 155 NRYPYIPPHVTKPKEKLNLYLVQLPESCAFSVPSDLQLLAIPLFQVFNNAEQYGEVISSL 214
Query: 209 PQALCR 214
P L R
Sbjct: 215 PTLLSR 220
>gi|384492027|gb|EIE83223.1| hypothetical protein RO3G_07928 [Rhizopus delemar RA 99-880]
Length = 157
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 98/150 (65%), Gaps = 8/150 (5%)
Query: 73 MRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV 132
MRRSV+ VL+VH+H PHVLM Q+ +FFKLPG L G +E EGLK +L+ LG D +
Sbjct: 1 MRRSVEAVLVVHQHNHPHVLMFQIANSFFKLPGHYLEPGVEETEGLKEILNKRLGPEDPL 60
Query: 133 KQ----EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNY 184
+ +W V + + WWRPN+E YPY+P H+T+PKE + L+++ LP VPKN
Sbjct: 61 EWDSNIDWSVGECLSTWWRPNYENYMYPYIPAHVTNPKEKKSLYIIHLPPNKELFVPKNM 120
Query: 185 KLVAAPLVELYDNSQGYGPIISSLPQALCR 214
KL+A PL ELYDNS YG +S++ L R
Sbjct: 121 KLLAVPLFELYDNSARYGAQLSTIAHLLSR 150
>gi|326475545|gb|EGD99554.1| cleavage and polyadenylation specific factor 5 [Trichophyton
tonsurans CBS 112818]
Length = 250
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 118/204 (57%), Gaps = 36/204 (17%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I ++ N+ K LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GV
Sbjct: 16 IIPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L + L+ DEIEG K L++ L +GV +
Sbjct: 76 LQM------------------------LSSNYDEIEGFKARLNERLAPVGSQFTGEGVNE 111
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 112 DWEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVP 171
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 172 LFELYDNTARYGPQLSAIPHLLSR 195
>gi|326483143|gb|EGE07153.1| cleavage and polyadenylation specificity factor subunit 5
[Trichophyton equinum CBS 127.97]
Length = 250
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 118/204 (57%), Gaps = 36/204 (17%)
Query: 23 LISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGV 80
+I ++ N+ K LYPLSNYTF K+ E+D SV AR +R+ + +E+ GMRR+ +GV
Sbjct: 16 IIPESFSANQPKTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGV 75
Query: 81 LLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQ 134
L + L+ DEIEG K L++ L +GV +
Sbjct: 76 LQM------------------------LSSNYDEIEGFKARLNERLAPVGSQFTGEGVNE 111
Query: 135 EWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAP 190
+W V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A P
Sbjct: 112 DWEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVP 171
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L ELYDN+ YGP +S++P L R
Sbjct: 172 LFELYDNTARYGPQLSAIPHLLSR 195
>gi|378726617|gb|EHY53076.1| autocrine motility factor receptor, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 220
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Query: 73 MRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---RR 129
MRR+ +G+L+ HEH PHVLMLQ+ FFKLPG L DEIEG K L++ L +
Sbjct: 1 MRRTCEGILVCHEHNHPHVLMLQIANAFFKLPGDYLPHDADEIEGFKMRLNERLAPTNPK 60
Query: 130 DGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYK 185
+G EW + D + WWRPN E YP++P H++ PKE ++L+L+ LP VPKN K
Sbjct: 61 EG-DTEWEIGDCLAQWWRPNHETFLYPFLPAHVSRPKELKKLYLIHLPPNKVLSVPKNMK 119
Query: 186 LVAAPLVELYDNSQGYGPIISSLPQALCR 214
L+A PL ELYDN+ YGP +S++P L R
Sbjct: 120 LLAVPLFELYDNTARYGPQLSAIPHYLSR 148
>gi|412994192|emb|CCO14703.1| Cleavage and polyadenylation specificity factor subunit 5
[Bathycoccus prasinos]
Length = 345
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 126/237 (53%), Gaps = 50/237 (21%)
Query: 28 LQYNRKKNLYPLSNYTFDIKDPLFEK----------DSSVPARFQRMRDEFEKIG--MRR 75
L +++ N++ L NYTF +K ++ ++ AR +R+R+++EK G RR
Sbjct: 99 LSKSKRLNVHSLGNYTFGVKVVKKKEGGEGGEEEEKSNAKDARLRRIREQYEKSGGIARR 158
Query: 76 SVDGVLLVHEHGLPHVLMLQ-----------------------------LGTTFFKLPGG 106
SV GV +V++HG PHVL+LQ T+ F+LPGG
Sbjct: 159 SVAGVCVVNQHGCPHVLLLQESTLPPGAQQRTADGKPASQWDRPGQHFSASTSTFRLPGG 218
Query: 107 ELNQGEDEIEGLKRLLSDTLG-----RRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVH 161
L GE EGLKR L++ L ++ + + D + W+R FEP YPY+P H
Sbjct: 219 RLRAGEGTTEGLKRKLANKLAAPNESNEANLRASFDILDQLSTWYRIGFEPQMYPYLPPH 278
Query: 162 ITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+T PKE +FLV+LPE+ VPK KLVA P+ ELYDN++ +G + SS+P L R
Sbjct: 279 VTKPKETLEVFLVELPEKCYFAVPKTSKLVAVPIFELYDNAEKFGAVASSIPHLLSR 335
>gi|326505750|dbj|BAJ95546.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 213
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 105/184 (57%), Gaps = 5/184 (2%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
+YPL Y F KD + R R++ F G+R V GVLLV G PHVL+LQ
Sbjct: 22 IYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVLLLQ 81
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFEPPQ 154
+ + F LPGG L E +++GLKR LS L D W + + IG WWR F+
Sbjct: 82 VRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGMWWRSEFDARP 141
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
+PY P + + KE +LFLV+LP VP+N KL+A PL +++DN+Q YGPIIS++P
Sbjct: 142 FPYPPPNTRASKECVKLFLVRLPMARQFVVPRNLKLLAVPLSQIHDNAQVYGPIISAIPN 201
Query: 211 ALCR 214
L +
Sbjct: 202 LLSK 205
>gi|413922202|gb|AFW62134.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 277
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 111/190 (58%), Gaps = 10/190 (5%)
Query: 35 NLYPLSNYTFDIKDP--LFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVL 92
++YPLS Y F +D + + R R++ F G+R SV GVLLV PHVL
Sbjct: 80 DIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHVL 139
Query: 93 MLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV----KQEWIVEDTIGNWWRP 148
+LQ+ + F LPGG L GE+E+ GLKR LS L D V +++W + IG WWR
Sbjct: 140 LLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDDVEAVEEEDWQIGQCIGMWWRS 199
Query: 149 NFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPI 204
FE +PY+P + KE +LFL++LP VP+N KL+A PL +++ N+Q YGPI
Sbjct: 200 EFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRNMKLLAVPLSQIHGNAQVYGPI 259
Query: 205 ISSLPQALCR 214
I+++P L +
Sbjct: 260 IAAIPSLLSK 269
>gi|259489948|ref|NP_001159123.1| uncharacterized protein LOC100304199 [Zea mays]
gi|219887529|gb|ACL54139.1| unknown [Zea mays]
Length = 224
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 111/190 (58%), Gaps = 10/190 (5%)
Query: 35 NLYPLSNYTFDIKDP--LFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVL 92
++YPLS Y F +D + + R R++ F G+R SV GVLLV PHVL
Sbjct: 27 DIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHVL 86
Query: 93 MLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV----KQEWIVEDTIGNWWRP 148
+LQ+ + F LPGG L GE+E+ GLKR LS L D V +++W + IG WWR
Sbjct: 87 LLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDDVEAVEEEDWQIGQCIGMWWRS 146
Query: 149 NFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPI 204
FE +PY+P + KE +LFL++LP VP+N KL+A PL +++ N+Q YGPI
Sbjct: 147 EFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRNMKLLAVPLSQIHGNAQVYGPI 206
Query: 205 ISSLPQALCR 214
I+++P L +
Sbjct: 207 IAAIPSLLSK 216
>gi|258571347|ref|XP_002544477.1| hypothetical protein UREG_03994 [Uncinocarpus reesii 1704]
gi|237904747|gb|EEP79148.1| hypothetical protein UREG_03994 [Uncinocarpus reesii 1704]
Length = 253
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 116/219 (52%), Gaps = 45/219 (20%)
Query: 8 PPSNSTLVTVNRTINLISKNLQYNRKKN--LYPLSNYTFDIKDPLFEKDSSVPARFQRMR 65
P S LV + +I K+ + LYPLSNYTF K+ E+D SV AR +R+
Sbjct: 11 PESTDPLVPLTAYRPIIPKSFSAKQPPTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLE 70
Query: 66 DEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDT 125
+ +E+ GMRR+ +GVL +EG K L++
Sbjct: 71 EHYEQYGMRRTCEGVL---------------------------------VEGFKARLNER 97
Query: 126 LG------RRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER 179
L +GV ++W V DT+ WWRPNFE YP++P H+T PKE ++L+ +QLP++
Sbjct: 98 LAPVGSQFTGEGVNEDWEVGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKK 157
Query: 180 ----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VPKN KL+A PL ELYDN+ YGP +S++P L R
Sbjct: 158 KVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSR 196
>gi|242081379|ref|XP_002445458.1| hypothetical protein SORBIDRAFT_07g019840 [Sorghum bicolor]
gi|241941808|gb|EES14953.1| hypothetical protein SORBIDRAFT_07g019840 [Sorghum bicolor]
Length = 233
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 115/198 (58%), Gaps = 22/198 (11%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPA-------RFQRMRDEFEKIGMRRSVDGVLLVHEHG 87
++YPL+ Y F +D ++VP R R++ F G+R SV GVLLV
Sbjct: 32 DIYPLTRYYFGARD----AAAAVPRGLETAADRALRLKANFAARGLRTSVHGVLLVELFD 87
Query: 88 LPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDG-----VKQE--WIVED 140
PH+L+LQ+ + F LPGG L GE+E++GLKR LS L D +++E W + +
Sbjct: 88 HPHLLLLQVRNSSFLLPGGRLRPGEEEVQGLKRKLSSKLSFVDADDDQTIEEEDDWQIGE 147
Query: 141 TIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYD 196
IG WWR FE +PY+P +PKE +LFLV+LP VP+N KL+A PL +++
Sbjct: 148 CIGMWWRSEFEAIPFPYMPPSFRAPKECIKLFLVRLPMSRQFIVPRNMKLLAVPLSQVHG 207
Query: 197 NSQGYGPIISSLPQALCR 214
N+Q YGPIIS +P L +
Sbjct: 208 NAQVYGPIISGIPNLLSK 225
>gi|226502762|ref|NP_001147338.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
gi|195610244|gb|ACG26952.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 224
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 10/190 (5%)
Query: 35 NLYPLSNYTFDIKDP--LFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVL 92
++YPLS Y F +D + + R R++ F G+R SV GVLLV PHVL
Sbjct: 27 DIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHVL 86
Query: 93 MLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV----KQEWIVEDTIGNWWRP 148
+LQ+ + F LPGG L GE+E+ GLKR LS L D +++W + IG WWR
Sbjct: 87 LLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDDAETVEEEDWQIGQCIGMWWRS 146
Query: 149 NFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPI 204
FE +PY+P + KE +LFL++LP VP+N KL+A PL +++ N+Q YGPI
Sbjct: 147 EFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRNMKLLAVPLSQIHGNAQVYGPI 206
Query: 205 ISSLPQALCR 214
++ +P L +
Sbjct: 207 VAGIPSLLSK 216
>gi|226487326|emb|CAX75528.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
Length = 139
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 80/91 (87%), Gaps = 1/91 (1%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
LYPL +Y+F K+P +E+D SVPARFQR++++FEK GMRRSV+G+LLVHEH LPHVL+L
Sbjct: 26 TLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVLLL 85
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDT 125
QLG TFFKLPGGEL+ GE+EIEGLKRLLS+
Sbjct: 86 QLG-TFFKLPGGELHPGEEEIEGLKRLLSEV 115
>gi|356558387|ref|XP_003547488.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Glycine max]
Length = 233
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 5/177 (2%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
++YPLS+Y F KD K + R RM+ + G+R V+ V+LV PH+L+L
Sbjct: 45 DIYPLSSYYFGSKDAFPSKYLTSADRVLRMKSNYAARGIRTCVEAVVLVELFKHPHLLLL 104
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQEWIVEDTIGNWWRPNFEPP 153
Q+ + +KLPGG L GE + +GLKR L+ L DG EW V + + WWRP+FE
Sbjct: 105 QIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSIIEDGDGSEWEVGECLEMWWRPDFETL 164
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
+P +P ++ KE ++FLV+LPE VPKN +L+A PL ++++N + YG IIS
Sbjct: 165 VFPCLPPNVKQTKECIKVFLVKLPESRKFIVPKNMRLLAVPLCQVHENHKTYGKIIS 221
>gi|58269392|ref|XP_571852.1| hypothetical protein CNG01010 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114299|ref|XP_774397.1| hypothetical protein CNBG3780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257032|gb|EAL19750.1| hypothetical protein CNBG3780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228088|gb|AAW44545.1| hypothetical protein CNG01010 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 229
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 115/218 (52%), Gaps = 40/218 (18%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV------------- 83
+PL NY F ++ E+D+SV R +R+ D++++ G RRSV+ +++V
Sbjct: 12 FPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVTVGNSISPSRALL 71
Query: 84 ----HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRD 130
HG HVL+LQ+ F+KLPGG L+ E + EGL L++ LG D
Sbjct: 72 NLPVQVHGFAHVLVLQVANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTTLKGKDED 131
Query: 131 GV----------KQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER- 179
+ ++W V D + W+RP+F+ YPY P H++ PKE ++L+LV LP
Sbjct: 132 DLPRTVWLAPEGGRDWEVRDCLSVWYRPHFDTFLYPYAPAHVSYPKECKKLYLVNLPPNK 191
Query: 180 ---VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VP N KL A P+ E YDN+ YGP + +P L +
Sbjct: 192 TFAVPANMKLHAIPIFEFYDNAARYGPQFAGIPYILSK 229
>gi|357147704|ref|XP_003574450.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 226
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 113/187 (60%), Gaps = 9/187 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPA-RFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
+YPLS Y F +DP + A R R++ F G+R V GVLLV G PH+L+L
Sbjct: 33 IYPLSRYYFGARDPASPARAETAADRALRLKANFAAHGLRTCVHGVLLVELLGRPHLLLL 92
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQE---WIVEDTIGNWWRPNFE 151
Q + F LPGG L GE +++GL+R LS L DG +QE W + + IG WR +FE
Sbjct: 93 QARNSSFLLPGGRLRPGEQDVQGLRRKLSSKLS-ADGHQQEDYGWQIGECIGMCWRSDFE 151
Query: 152 PPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISS 207
+PY+P + +PKE ++FL++LP VP+N KL+A PL +++DN+Q YGPIIS
Sbjct: 152 SGPFPYLPPNTRAPKECTKMFLIRLPMSRRFIVPRNLKLLAVPLSQIHDNAQVYGPIISG 211
Query: 208 LPQALCR 214
+P L +
Sbjct: 212 IPNLLSK 218
>gi|326431994|gb|EGD77564.1| hypothetical protein PTSG_08662 [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 31 NRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
+R +++P SNY D E S++ + + +F + G+ ++ V+LV +HG PH
Sbjct: 5 HRHVDIFPNSNYKILKDDSKTEPKSAMDEKLMALMHKFNETGLVETMQLVMLVEQHGHPH 64
Query: 91 VLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNF 150
VL+LQ F LP E+ E E + R+L + + ++ + D WWRP+F
Sbjct: 65 VLLLQPHPKFSLLPHTEIKPDETSKETVHRILQEQFQVAEPALNQFRIVDLAAVWWRPHF 124
Query: 151 EPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIIS 206
E P YPY P H+T PKE ++ LVQ+PE VP N + A PL+ELYDN + +G +I+
Sbjct: 125 EQPTYPYQPPHVTKPKERIQVVLVQMPESCDFVVPGNGNVRAVPLIELYDNKESFGQLIA 184
Query: 207 SLPQALCR 214
+LPQ L R
Sbjct: 185 TLPQTLSR 192
>gi|407926085|gb|EKG19056.1| hypothetical protein MPH_03746 [Macrophomina phaseolina MS6]
Length = 182
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 83/132 (62%), Gaps = 10/132 (7%)
Query: 93 MLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWW 146
MLQ+ FFKLPG L +DEI+G K L++ L +GV EW + DT+ WW
Sbjct: 1 MLQIANAFFKLPGDYLRPEDDEIDGFKARLNERLAPVGSQFTGEGVNDEWQIGDTLAQWW 60
Query: 147 RPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYG 202
RPNFE YP++P H+T PKE ++L+ +QLP VPKN KL+A PL ELYDN+ YG
Sbjct: 61 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYG 120
Query: 203 PIISSLPQALCR 214
P +S++P L R
Sbjct: 121 PQLSAIPHLLSR 132
>gi|89267099|emb|CAJ41963.1| hypothetical protein UHO_0263 [Ustilago hordei]
Length = 145
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 84/130 (64%), Gaps = 14/130 (10%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
L+P++++TF KD E+D SV AR QR+++ +E +GMRR+V+ VL+VHEHG PHVLMLQ
Sbjct: 7 LHPVTSFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPHVLMLQ 66
Query: 96 LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG--------------RRDGVKQEWIVEDT 141
+ FFKLPG L GEDE+EG+K L + LG R+ EW ++D
Sbjct: 67 IANAFFKLPGDYLKPGEDEVEGMKARLDERLGPVESDPNSFGPNGEGRNKDDGEWEIQDC 126
Query: 142 IGNWWRPNFE 151
+ WWRPNFE
Sbjct: 127 LAQWWRPNFE 136
>gi|116789706|gb|ABK25350.1| unknown [Picea sitchensis]
Length = 161
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 34/181 (18%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
++PLS Y+F K+ +KD + R RMR F + G+R V+G+LLV+E+G PH+L+L
Sbjct: 8 KVHPLSCYSFGKKEAKVDKDIFLSDRLDRMRANFMRDGLRTYVEGILLVYEYGHPHLLLL 67
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTL-GRRDGVKQEWIVEDTIGNWWRPNFEPP 153
Q G +LPGG L GE+EIEGLKR L+ L V+ W + + G WWRPNFE
Sbjct: 68 QKGNKIIRLPGGRLRPGENEIEGLKRKLTSKLSSSSSSVQPIWQIGECAGVWWRPNFETL 127
Query: 154 QYPYVPVHITSPKEHRRLFLVQLPERVPKNYKLVAAPLVELYDNSQGYGPIISSLPQALC 213
YPY P HI PK+ YGP ISS+PQ L
Sbjct: 128 MYPYCPPHINKPKK---------------------------------YGPEISSIPQQLS 154
Query: 214 R 214
R
Sbjct: 155 R 155
>gi|125561458|gb|EAZ06906.1| hypothetical protein OsI_29145 [Oryza sativa Indica Group]
Length = 226
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
Query: 33 KKNLYPLSNYTFDIKDPLFEKDSSVPA----RFQRMRDEFEKIGMRRSVDGVLLVHEHGL 88
+ +YPL Y F +D + R R++ F G+R SV GVLLV
Sbjct: 22 RVEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDH 81
Query: 89 PHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-------RRDGVKQEWIVEDT 141
PHVL+LQ+ + F LPGG L GE +++GLKR LS L + EW + +
Sbjct: 82 PHVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDDKDGDGDDEWQIGEC 141
Query: 142 IGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDN 197
IG WWR F+ +PY+ + +PKE +LFL++LP VP+N KL+A PL +++DN
Sbjct: 142 IGMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVVPRNMKLLAVPLSQIHDN 201
Query: 198 SQGYGPIISSLPQALCR 214
+Q YG II+ +P L +
Sbjct: 202 AQVYGSIIAGIPNLLSK 218
>gi|115476302|ref|NP_001061747.1| Os08g0398800 [Oryza sativa Japonica Group]
gi|37805958|dbj|BAC99373.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|37806023|dbj|BAC99435.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|113623716|dbj|BAF23661.1| Os08g0398800 [Oryza sativa Japonica Group]
gi|125603321|gb|EAZ42646.1| hypothetical protein OsJ_27211 [Oryza sativa Japonica Group]
gi|215692402|dbj|BAG87822.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708715|dbj|BAG93984.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 226
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 106/197 (53%), Gaps = 15/197 (7%)
Query: 33 KKNLYPLSNYTFDIKDPLFEKDSSVPA----RFQRMRDEFEKIGMRRSVDGVLLVHEHGL 88
+ +YPL Y F +D + R R++ F G+R SV GVLLV
Sbjct: 22 RVEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDH 81
Query: 89 PHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-------RRDGVKQEWIVEDT 141
PHVL+LQ+ + F LPGG L GE +++GLKR LS L EW + +
Sbjct: 82 PHVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDDEDGDGDDEWQIGEC 141
Query: 142 IGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDN 197
IG WWR F+ +PY+ + +PKE +LFL++LP VP+N KL+A PL +++DN
Sbjct: 142 IGMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVVPRNMKLLAVPLSQIHDN 201
Query: 198 SQGYGPIISSLPQALCR 214
+Q YG II+ +P L +
Sbjct: 202 AQVYGSIIAGIPNLLSK 218
>gi|390369680|ref|XP_001199751.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like, partial [Strongylocentrotus purpuratus]
Length = 119
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 62/66 (93%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
YPL+NYTF K+PL+EKDSSVPARFQRM+DEF+K+G RRSV+GVL+VHEH LPHVL+LQL
Sbjct: 1 YPLTNYTFGTKEPLYEKDSSVPARFQRMKDEFQKMGTRRSVEGVLIVHEHDLPHVLLLQL 60
Query: 97 GTTFFK 102
GTTFFK
Sbjct: 61 GTTFFK 66
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 38/48 (79%), Gaps = 4/48 (8%)
Query: 171 LFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
L+ VQL E+ VP+NYKLVAAPL ELYDNS GYGP+ISSLPQ L R
Sbjct: 72 LYFVQLAEKALFAVPRNYKLVAAPLFELYDNSPGYGPVISSLPQLLSR 119
>gi|226290895|gb|EEH46323.1| insulin-degrading enzyme [Paracoccidioides brasiliensis Pb18]
Length = 1374
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 10/121 (8%)
Query: 104 PGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPNFEPPQYPY 157
PG L+ +DE+EG K L++ L GV EW + DT+ WWRPNFE YP+
Sbjct: 1195 PGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDEWEIGDTLAQWWRPNFETFMYPF 1254
Query: 158 VPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALC 213
+P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +S++P L
Sbjct: 1255 LPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLS 1314
Query: 214 R 214
R
Sbjct: 1315 R 1315
>gi|302501895|ref|XP_003012939.1| hypothetical protein ARB_00821 [Arthroderma benhamiae CBS 112371]
gi|291176500|gb|EFE32299.1| hypothetical protein ARB_00821 [Arthroderma benhamiae CBS 112371]
Length = 195
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 10/131 (7%)
Query: 94 LQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWR 147
++ F PG L +DEIEG K L++ L +GV ++W V DT+ WWR
Sbjct: 10 IEPADVFDNRPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQWWR 69
Query: 148 PNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGP 203
PNFE YP++P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP
Sbjct: 70 PNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGP 129
Query: 204 IISSLPQALCR 214
+S++P L R
Sbjct: 130 QLSAIPHLLSR 140
>gi|225556923|gb|EEH05210.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
capsulatus G186AR]
Length = 300
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 78/121 (64%), Gaps = 10/121 (8%)
Query: 104 PGGELNQGEDEIEGLKRLLSDTLG------RRDGVKQEWIVEDTIGNWWRPNFEPPQYPY 157
PG L+ +DE+EG K L++ L +GV +W + DT+ WWRPNFE YP+
Sbjct: 114 PGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDDWEIGDTLAQWWRPNFETFMYPF 173
Query: 158 VPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALC 213
+P H+T PKE ++L+ +QLP++ VPKN KL+A PL ELYDN+ YGP +S++P L
Sbjct: 174 LPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLS 233
Query: 214 R 214
R
Sbjct: 234 R 234
>gi|405121948|gb|AFR96716.1| cleavage and polyadenylation specific factor 5 [Cryptococcus
neoformans var. grubii H99]
Length = 218
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 34/197 (17%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
+PL NY F ++ E+D+SV R +R+ D++ + G RRSV+ +++V HG PHVL+LQ+
Sbjct: 12 FPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYTESGTRRSVEAIMVVTVHGFPHVLVLQV 71
Query: 97 GTTFFKLPGGELNQGEDEIEGLKRLLSDTLG---------RRDGV----------KQEWI 137
F+KLPGG L+ E + EGL L++ LG D + ++W
Sbjct: 72 ANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTTFKGKGEDDLPHTVWLAPEEGRDWE 131
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPERVPKNYKLVAAPLVELYDN 197
V D + W+RP+F+ Y+ V + VP N KL A P+ E YDN
Sbjct: 132 VRDCLSVWYRPHFDTFILTYLSVETFA---------------VPANMKLHAIPVFEFYDN 176
Query: 198 SQGYGPIISSLPQALCR 214
+ YGP + +P L R
Sbjct: 177 AARYGPQFAGIPYILSR 193
>gi|4914406|emb|CAB43657.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gi|7269881|emb|CAB79740.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
Length = 185
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 94/184 (51%), Gaps = 40/184 (21%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
+LYPLS+Y F K+ L KD + R PHVL+L
Sbjct: 30 DLYPLSSYYFGSKEALRVKDEIISDRH---------------------------PHVLLL 62
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
Q + FKLPGG L GE GL +L V + IG WWRPNFE
Sbjct: 63 QYRNSIFKLPGGRLRPGES---GLVCCFLASLCINIAVGE------CIGMWWRPNFETLM 113
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YP++P +I PKE +LFLV+LP VPKN+KL+A PL +L++N + YGPI+S +P+
Sbjct: 114 YPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYGPIMSQIPK 173
Query: 211 ALCR 214
L +
Sbjct: 174 LLSK 177
>gi|118488203|gb|ABK95921.1| unknown [Populus trichocarpa]
Length = 148
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 66/93 (70%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLML 94
N YPLS+YTF K+P EKD+SV R RM+ + K GMR SV+ +LLV EH PH+L+L
Sbjct: 10 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 69
Query: 95 QLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG 127
Q+G TF KLPGG L GE+E EGLKR L+ LG
Sbjct: 70 QIGNTFCKLPGGRLKPGENENEGLKRKLTSKLG 102
>gi|321261305|ref|XP_003195372.1| hypothetical protein CGB_G5350W [Cryptococcus gattii WM276]
gi|317461845|gb|ADV23585.1| Hypothetical protein CGB_G5350W [Cryptococcus gattii WM276]
Length = 205
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 34/205 (16%)
Query: 37 YPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL 96
+PL NY F ++ E+D+SV R +R+ D++++ G RRSV+ +++V + + L
Sbjct: 8 FPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVK-------VGISL 60
Query: 97 GTTFFKL----PGGELNQGEDEIEGLKRLLSDTLG---------RRDGV----------K 133
G++ L PGG L+ E + EGL L++ LG D +
Sbjct: 61 GSSRALLIPPFPGGHLDPSESDAEGLITRLNEQLGVPVTTLKGKSEDDLPRTVWLAPEGG 120
Query: 134 QEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAA 189
++W V D + W+RP+F+ YPY P H++ PKE ++++LV LP VP N KL A
Sbjct: 121 RDWEVRDCLSIWYRPHFDTFLYPYAPAHVSYPKECKKIYLVNLPPNKTFAVPANMKLHAI 180
Query: 190 PLVELYDNSQGYGPIISSLPQALCR 214
P+ E YDN+ YGP + +P L +
Sbjct: 181 PIFEFYDNAARYGPQFAGIPYILSK 205
>gi|57997521|emb|CAI46057.1| hypothetical protein [Homo sapiens]
Length = 105
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 60/70 (85%)
Query: 25 SKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVH 84
+K L R NLYPL+NYTF K+PL+EKDSSV ARFQRMR+EF+KIGMRR+V+GVL+VH
Sbjct: 28 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVH 87
Query: 85 EHGLPHVLML 94
EH LPHVL+L
Sbjct: 88 EHRLPHVLLL 97
>gi|302680302|ref|XP_003029833.1| hypothetical protein SCHCODRAFT_82994 [Schizophyllum commune H4-8]
gi|300103523|gb|EFI94930.1| hypothetical protein SCHCODRAFT_82994 [Schizophyllum commune H4-8]
Length = 118
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 81/146 (55%), Gaps = 38/146 (26%)
Query: 73 MRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV 132
MRR+ +GVL+VH+HG PH+LMLQ FFKLPG L GEDE++GLKR L++ L
Sbjct: 1 MRRTDEGVLVVHDHGHPHILMLQTANAFFKLPGDYLKSGEDEVDGLKRRLNECLA----- 55
Query: 133 KQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVA 188
PP + + ++LFLVQ+ E+ V KN KL+A
Sbjct: 56 -------------------PP----------NASKCKKLFLVQMTEKYVLAVAKNMKLLA 86
Query: 189 APLVELYDNSQGYGPIISSLPQALCR 214
PL ELYDN+ YGP +S++P L R
Sbjct: 87 IPLFELYDNAAKYGPQLSAIPHLLSR 112
>gi|71408035|ref|XP_806446.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|50363269|gb|AAT75337.1| cleavage factor I 25 kDa [Trypanosoma cruzi]
gi|70870196|gb|EAN84595.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 292
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 109/223 (48%), Gaps = 62/223 (27%)
Query: 46 IKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTT------ 99
+K PL EK S+ AR R+E SV+GVLLVH H PHVL+L+ T
Sbjct: 71 LKTPL-EKLMSLKAR---CREE----QCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHS 122
Query: 100 ------------FFKLPGGELNQGE-DEIEGLKRLLSDTLGRRDGV---------KQEWI 137
F LPGG +GE +EI L++L D L + + E +
Sbjct: 123 RVLPATNTNNLAVFSLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAESESSEMV 182
Query: 138 VE-------------------DTIGNWWRPNFEPPQYPYVPVHITSP--KEHRRLFLVQL 176
VE + +G W+RP+F+P YPYVP H+ KE R +FLV L
Sbjct: 183 VEVGASHSLAVAPSSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVHL 242
Query: 177 PERV-----PKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
P ++ ++ +LVAAPL +LY+NS YGP+I+S+P L R
Sbjct: 243 PPQMLLTVAQRDVELVAAPLFDLYENSAKYGPLIASIPTLLSR 285
>gi|407853607|gb|EKG06513.1| hypothetical protein TCSYLVIO_002377 [Trypanosoma cruzi]
Length = 270
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 109/223 (48%), Gaps = 62/223 (27%)
Query: 46 IKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTT------ 99
+K PL EK S+ AR R+E SV+GVLLVH H PHVL+L+ T
Sbjct: 49 LKTPL-EKLMSLKAR---CREE----QCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHS 100
Query: 100 ------------FFKLPGGELNQGE-DEIEGLKRLLSDTLGRRDGV---------KQEWI 137
F LPGG +GE +EI L++L D L + + E +
Sbjct: 101 RVLPATNTNNLAVFFLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAESESSETV 160
Query: 138 VE-------------------DTIGNWWRPNFEPPQYPYVPVHITSP--KEHRRLFLVQL 176
VE + +G W+RP+F+P YPYVP H+ KE R +FLV L
Sbjct: 161 VEVGASHNLAVAPSSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVHL 220
Query: 177 PERV-----PKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
P ++ ++ +LVAAPL +LY+NS YGP+I+S+P L R
Sbjct: 221 PPQMLLTVAQRDVELVAAPLFDLYENSAKYGPLIASIPTLLSR 263
>gi|71662854|ref|XP_818427.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883679|gb|EAN96576.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 292
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 109/223 (48%), Gaps = 62/223 (27%)
Query: 46 IKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTT------ 99
+K PL EK S+ AR R+E SV+GVLLVH H PHVL+L+ T
Sbjct: 71 LKTPL-EKLMSLKAR---CREE----QCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHS 122
Query: 100 ------------FFKLPGGELNQGE-DEIEGLKRLLSDTLGRRDGV---------KQEWI 137
F LPGG +GE +EI L++L D L + + E +
Sbjct: 123 RVLPATNTNNLAVFFLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAENESSETV 182
Query: 138 VE-------------------DTIGNWWRPNFEPPQYPYVPVHITSP--KEHRRLFLVQL 176
VE + +G W+RP+F+P YPYVP H+ KE R +FLV L
Sbjct: 183 VEVGASHNLAVAPSSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVHL 242
Query: 177 PERV-----PKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
P ++ ++ +LVAAPL +LY+NS YGP+I+S+P L R
Sbjct: 243 PPQMLLTVAQRDVELVAAPLFDLYENSAKYGPLIASIPTLLSR 285
>gi|407420837|gb|EKF38695.1| hypothetical protein MOQ_001095 [Trypanosoma cruzi marinkellei]
Length = 292
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 96/193 (49%), Gaps = 54/193 (27%)
Query: 76 SVDGVLLVHEHGLPHVLMLQLGTT------------------FFKLPGGELNQGE-DEIE 116
SV+GVLLVH H PHVL+L+ T F LPGG +GE +EI
Sbjct: 93 SVEGVLLVHVHDHPHVLLLRHANTKASAHSRVLPATNTNNLAVFFLPGGRCRKGEPEEIC 152
Query: 117 GLKRLLSDTLGRRDGVK---------QEWIVE-------------------DTIGNWWRP 148
L++L D L + + E +VE + +G W+RP
Sbjct: 153 LLRKLGRDLLNEKKSLMASRTAESEPSETVVEVGASHNLAVAPSSSSFRVGEALGRWYRP 212
Query: 149 NFEPPQYPYVPVHITSP--KEHRRLFLVQLPERV-----PKNYKLVAAPLVELYDNSQGY 201
+F+P YPYVP H+ KE R +FLV LP ++ ++ +LVAAPL +LY+NS Y
Sbjct: 213 HFDPFMYPYVPAHVAESDVKEVRTVFLVHLPPQMLLTVAQRDVELVAAPLFDLYENSAKY 272
Query: 202 GPIISSLPQALCR 214
GP+I+S+P L R
Sbjct: 273 GPLIASIPTLLSR 285
>gi|324524942|gb|ADY48486.1| Cleavage and polyadenylation specificity factor subunit 5 [Ascaris
suum]
Length = 93
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 24 ISKNLQYNRK-KNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLL 82
+ K + NRK LYPL+NY F K+ E+D SV RF RMR+EF K+GMRRSVD V+L
Sbjct: 1 MEKERELNRKIVKLYPLTNYVFGKKEAQHERDLSVHDRFDRMRNEFHKMGMRRSVDAVIL 60
Query: 83 VHEHGLPHVLMLQLGTTFFKLP 104
VHEH LPHVL+L++G FFKLP
Sbjct: 61 VHEHSLPHVLLLRVGQNFFKLP 82
>gi|72390984|ref|XP_845786.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175827|gb|AAX69954.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802322|gb|AAZ12227.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261329211|emb|CBH12190.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 300
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 63/230 (27%)
Query: 40 SNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL--- 96
+N IK PL EK S+ AR + E +++ +SV+GVLLVH H PHVL+L+
Sbjct: 72 TNSERRIKTPL-EKLMSLRARCR----EQQRV---QSVEGVLLVHAHDHPHVLLLRHNVK 123
Query: 97 --------------GTTFFKLPGGELNQGE------------DEIEGLKRLLSDTLGRRD 130
T ++LPGG GE D + KRL S + +
Sbjct: 124 TTNRSRVLPATNTNSTAVYRLPGGRCRNGEPEELCLLRKLGRDLLNESKRLTSSSTAEEE 183
Query: 131 -------------------GVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHIT--SPKEHR 169
+ V + + W+RP+F+P YPYVP H+ +E R
Sbjct: 184 RSEVVVDVGSAHPNGTAVTASSSSFRVGEVLARWYRPHFDPLMYPYVPAHVAENDVREVR 243
Query: 170 RLFLVQLPERVP-----KNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+FLV +P R+ + +LVAAPL +LYDN+ YG +I+S+P L R
Sbjct: 244 TIFLVHMPPRMLLTGTYGDEELVAAPLFDLYDNTAKYGVLIASIPTLLSR 293
>gi|402593919|gb|EJW87846.1| pre-mRNA cleavage factor im, partial [Wuchereria bancrofti]
Length = 64
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Query: 155 YPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQ 210
YPY+P H+T PKE +LFLVQLPER VPKNYKLVAAPL ELYDNS GYG +I+SLPQ
Sbjct: 1 YPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDNSTGYGNLIASLPQ 60
Query: 211 ALCR 214
L R
Sbjct: 61 VLSR 64
>gi|389601578|ref|XP_001562265.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505101|emb|CAM39294.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 271
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 111/257 (43%), Gaps = 76/257 (29%)
Query: 33 KKNLYPLSNYTFDIKDPLFEKDSSVPAR----------FQRMRDEFEKI-GMRR------ 75
K ++YP+ NYT D + + V R R R+ EK+ +++
Sbjct: 6 KLDVYPVENYTQASVD-VSNGNGGVSGRKVNAGIGSSALLRPRNAIEKLLSLKKRCEEEL 64
Query: 76 ---SVDGVLLVHEHGLPHVLMLQL--------------------GTTFFKLPGGELNQGE 112
SV+GVLLVH H PHVL+++ ++LPGG +GE
Sbjct: 65 CVHSVEGVLLVHLHRHPHVLLMKQINVRSRDADGMRTVPPSNMNAEVMYRLPGGRCRRGE 124
Query: 113 DEIEGLKRLLSDTL----------------GRRDGVKQEWI------------VEDTIGN 144
E L R L L G D V + + + +
Sbjct: 125 AEEGCLLRKLGRHLLNEAKTPAGASEVANTGHSDTVVDVGMAHNASKAGRFFRIGEVLST 184
Query: 145 WWRPNFEPPQYPYVPVHI--TSPKEHRRLFLVQLP-----ERVPKNYKLVAAPLVELYDN 197
W+RP+F P YPYVP HI +S +E R ++LV L V + +LVAAPL +LY+N
Sbjct: 185 WYRPHFTPHMYPYVPAHIAASSVREVRTVYLVHLEPTVYFNMVQEGVELVAAPLFDLYEN 244
Query: 198 SQGYGPIISSLPQALCR 214
S YGPIISSLP L R
Sbjct: 245 SSKYGPIISSLPVLLSR 261
>gi|340054509|emb|CCC48807.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 290
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 100/223 (44%), Gaps = 62/223 (27%)
Query: 46 IKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQL--------- 96
IK P FEK S+ AR + + SV+GVLLVH H PH+L+L+
Sbjct: 69 IKTP-FEKLMSLKARCREQQ-------CVHSVEGVLLVHAHNHPHILLLRHNPKASSRSR 120
Query: 97 --------GTTFFKLPGGELNQGEDEIEGLKRLLSDTL-------GRRDGVKQE------ 135
T F+LPGG GE E L R L L GR ++E
Sbjct: 121 VQPATNVNSTMVFRLPGGRCRSGELEESCLLRKLGRDLFNESKHAGRAQAAEEERSETVV 180
Query: 136 -----------------WIVEDTIGNWWRPNFEPPQYPYVPVHIT--SPKEHRRLFLVQL 176
+ V + + W+RP+F+P YPY+P HI+ +E R +FLV L
Sbjct: 181 DVAGSRGSAGTSTSASSFRVGEVLARWYRPHFDPLMYPYIPPHISENDVREVRTIFLVHL 240
Query: 177 PERV-----PKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
P + +LVA PL +LYDN+ YG +I+S+P L R
Sbjct: 241 PPHMLLTTTETEEELVAVPLFDLYDNTAKYGSLIASIPTLLSR 283
>gi|146089416|ref|XP_001470377.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070410|emb|CAM68748.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 271
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 108/261 (41%), Gaps = 74/261 (28%)
Query: 28 LQYNRKKNLYPLSNYT---FDIKDPL---------FEKDSSVPAR-------FQRMRDEF 68
+ K ++YPL NYT D+ + +S P R ++
Sbjct: 1 MSLKAKLDVYPLENYTQTSVDVSNGHAGVAGNKVNLGAGNSAPFRPPSAIEKLLSLKKRC 60
Query: 69 EKIGMRRSVDGVLLVHEHGLPHVLMLQL--------------------GTTFFKLPGGEL 108
E+ SV+GVLLVH H PH+L+++ ++LPGG
Sbjct: 61 EEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTHDADGMRTVPPSNTNAEATYRLPGGRC 120
Query: 109 NQGEDEIEGLKRLLSDTL----------------GRRDGVKQEWI------------VED 140
+GE E L R L L G D V + V +
Sbjct: 121 RRGEAEESCLLRKLGRHLLNEAKAPAGAAEVASAGNSDTVVDVGMTHNASKAGSCFRVGE 180
Query: 141 TIGNWWRPNFEPPQYPYVPVHIT--SPKEHRRLFLVQLP-----ERVPKNYKLVAAPLVE 193
+ W+RP+F P YPYVP HI S +E R ++LV L V + +LVAAPL +
Sbjct: 181 VLATWYRPHFTPHMYPYVPAHIAAGSVREVRAIYLVHLEPTVYFSMVQEGVELVAAPLFD 240
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LY+N+ YGPII+SLP L R
Sbjct: 241 LYENASKYGPIIASLPALLSR 261
>gi|398016859|ref|XP_003861617.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499844|emb|CBZ34917.1| hypothetical protein, conserved [Leishmania donovani]
Length = 271
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 108/261 (41%), Gaps = 74/261 (28%)
Query: 28 LQYNRKKNLYPLSNYT---FDIKDPL---------FEKDSSVPAR-------FQRMRDEF 68
+ K ++YPL NYT D+ + +S P R ++
Sbjct: 1 MSLKAKLDVYPLENYTQTSVDVSNGHAGVAGNKVNLGAGNSAPFRPPSAIEKLLSLKKRC 60
Query: 69 EKIGMRRSVDGVLLVHEHGLPHVLMLQL--------------------GTTFFKLPGGEL 108
E+ SV+GVLLVH H PH+L+++ ++LPGG
Sbjct: 61 EEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTRDADGMRTVPPSNTNAEATYRLPGGRC 120
Query: 109 NQGEDEIEGLKRLLSDTL----------------GRRDGVKQEWI------------VED 140
+GE E L R L L G D V + V +
Sbjct: 121 RRGEAEESCLLRKLGRHLLNEAKAPAGAAEVASAGNSDTVVDVGMTHNASKAGSCFRVGE 180
Query: 141 TIGNWWRPNFEPPQYPYVPVHIT--SPKEHRRLFLVQLP-----ERVPKNYKLVAAPLVE 193
+ W+RP+F P YPYVP HI S +E R ++LV L V + +LVAAPL +
Sbjct: 181 VLATWYRPHFTPHMYPYVPAHIAAGSVREVRTIYLVHLEPTVYFSMVQEGVELVAAPLFD 240
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LY+N+ YGPII+SLP L R
Sbjct: 241 LYENASKYGPIIASLPALLSR 261
>gi|401423694|ref|XP_003876333.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492575|emb|CBZ27852.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 271
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 107/256 (41%), Gaps = 74/256 (28%)
Query: 33 KKNLYPLSNYT---FDIKDPL---------FEKDSSVPAR-------FQRMRDEFEKIGM 73
K ++YP+ NYT DI + SS P R ++ E+
Sbjct: 6 KLDVYPVENYTQTSVDISNGHAGVAGNKVNLGVGSSAPFRPPSAIEKLLSLKKRCEEEPC 65
Query: 74 RRSVDGVLLVHEHGLPHVLMLQL--------------------GTTFFKLPGGELNQGED 113
SV+GVLLVH H PH+L+++ ++LPGG +GE
Sbjct: 66 VHSVEGVLLVHLHRHPHILLMKQINLRTRDADGVRTVPPSNTNAEVTYRLPGGRCRRGEA 125
Query: 114 EIEGLKRLLSDTL--------GRRDGVKQE--------------------WIVEDTIGNW 145
E L R L L G +G + V + + W
Sbjct: 126 EESCLLRKLGRHLLNEAKTPAGAAEGTSASNSDTVVDVGMTHSASKAGSCFRVGEVLATW 185
Query: 146 WRPNFEPPQYPYVPVHIT--SPKEHRRLFLVQLP-----ERVPKNYKLVAAPLVELYDNS 198
+RP+F P YPYVP HI S +E R ++LV L V + +LVAAPL +LY+NS
Sbjct: 186 YRPHFTPHMYPYVPAHIAAGSVREVRTVYLVHLEPTVYFNMVQEGVELVAAPLFDLYENS 245
Query: 199 QGYGPIISSLPQALCR 214
YGPII+SLP L R
Sbjct: 246 SKYGPIIASLPVLLSR 261
>gi|157870973|ref|XP_001684036.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127104|emb|CAJ04590.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 271
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 109/261 (41%), Gaps = 74/261 (28%)
Query: 28 LQYNRKKNLYPLSNYT---FDIKDPL---------FEKDSSVPAR-------FQRMRDEF 68
+ K ++YP+ NYT D+ + S+ P R ++
Sbjct: 1 MSLKAKLDVYPVENYTQTSVDVSNGHAGVAGNKVNLGAGSAAPFRPPSAIEKLLSLKKRC 60
Query: 69 EKIGMRRSVDGVLLVHEHGLPHVLMLQL--------------------GTTFFKLPGGEL 108
E+ SV+GVLLVH H PH+L+++ ++LPGG
Sbjct: 61 EEEPCVHSVEGVLLVHLHRHPHILLMKQINSRTRDADGMRTVPPSNTNAEVTYRLPGGRC 120
Query: 109 NQGEDEIEGLKRLLSDTL----------------GRRDGVKQEWI------------VED 140
+GE E L R L L G D V + V +
Sbjct: 121 RRGEAEESCLLRKLGRHLLNEAKTPAGAAEVASTGNSDTVVDVGMTHTASKAGSCFRVGE 180
Query: 141 TIGNWWRPNFEPPQYPYVPVHIT--SPKEHRRLFLVQLP-----ERVPKNYKLVAAPLVE 193
+ W+RP+F P YPYVP HI S +E R ++LV L V ++ +LVAAPL +
Sbjct: 181 VLATWYRPHFTPHMYPYVPAHIAAGSVREVRTIYLVHLEPTVYFTMVQESVELVAAPLFD 240
Query: 194 LYDNSQGYGPIISSLPQALCR 214
LY+NS YGPI++SLP L R
Sbjct: 241 LYENSSKYGPIVASLPVLLSR 261
>gi|342181834|emb|CCC91313.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 300
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 55/194 (28%)
Query: 76 SVDGVLLVHEHGLPHVLMLQLG-----------------TTFFKLPGGELNQGE-DEIEG 117
SV+GVLLVH H PHVL+L+ T ++LPGG GE +E+
Sbjct: 100 SVEGVLLVHAHDHPHVLLLRHSVKTASRSRVLPPTNINNTAAYRLPGGRCRVGEQEELCL 159
Query: 118 LKRLLSDTLGRR---------DGVKQEWIVE---------------------DTIGNWWR 147
L++L D L + + E +V+ + + W+R
Sbjct: 160 LRKLGRDLLNESKCPPPSHGSEEKQSETVVDISGSHSAGASAAVSSSSFRVGEVLARWYR 219
Query: 148 PNFEPPQYPYVPVHIT--SPKEHRRLFLVQLP-----ERVPKNYKLVAAPLVELYDNSQG 200
P+F+P YPY+P H+ KE R +FLV +P R + +LVAAPL +LYDN+
Sbjct: 220 PHFDPLMYPYIPAHVAENDVKEIRTIFLVHMPPHMLLTRACGDEELVAAPLFDLYDNTSK 279
Query: 201 YGPIISSLPQALCR 214
YG +I+S+P L R
Sbjct: 280 YGVLIASIPTLLSR 293
>gi|68068277|ref|XP_676048.1| mRNA cleavage factor-like protein [Plasmodium berghei strain ANKA]
gi|56495563|emb|CAH97001.1| mRNA cleavage factor-like protein, putative [Plasmodium berghei]
Length = 241
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 14 LVTVNRT--INLISKNLQYNRKKN---LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEF 68
+ T N T I +I+ N+ K+ LYP +Y F+I + L +K ++++ + +
Sbjct: 1 MATSNPTQGIGIINANVGSKESKSEWVLYPQDSYEFNIDEKLKKKFIIDTEKYKKRINSY 60
Query: 69 EKIGMRRSVDGVLLVHEHGLPHVLMLQ-LGTTFFKLPGGELNQGEDEIEGLKRLL----- 122
K G+R +V +LL H H PH+L+LQ L T + GG+ N E + LK+ L
Sbjct: 61 NKNGIRNTVIAILLCHRHEYPHLLLLQNLSTQEYYFLGGKYNSWEKPGDVLKKKLQKYIN 120
Query: 123 --------------SDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEH 168
+D G + + V + +G WW+ + Y+P H+T PKE
Sbjct: 121 KIQDIHFSVNKLNINDQTGNAKNKDEIFDVGEFLGEWWKTQYASVYLSYLPAHVTRPKEC 180
Query: 169 RRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+L+ V +P++ +P + L A PL +L G IS L L R
Sbjct: 181 AKLYQVTIPDKCIFHLPPGFTLKAIPLFDL----NNCGIAISGLSSILSR 226
>gi|124505817|ref|XP_001351022.1| mRNA cleavage factor-like protein, putative [Plasmodium falciparum
3D7]
gi|23510665|emb|CAD49050.1| mRNA cleavage factor-like protein, putative [Plasmodium falciparum
3D7]
Length = 232
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 20/195 (10%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
LYP SNY F+I + L K + ++ + + K G+R SV ++L H + PH+L+LQ
Sbjct: 28 LYPQSNYEFNIDEKLKNKFIIDKEKCKKRINAYNKNGIRNSVLAIILCHRYEYPHLLLLQ 87
Query: 96 -LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV---------KQEWIVE--DTIG 143
+ + + L G+ E E LK+ L + + + +QE VE D +G
Sbjct: 88 HIESQKYYLLNGKYKTWEKPKEVLKKKLQKYINKIKDIHFTPAQINKEQEETVEIGDFLG 147
Query: 144 NWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQ 199
WWR F PY+P HI+ PKE+ RL+ V L + +P + L A PL +L
Sbjct: 148 EWWRTQFNSVFLPYLPAHISRPKEYIRLYQVILSPKCIFHLPPGFTLKAIPLFDL----N 203
Query: 200 GYGPIISSLPQALCR 214
G IS L L R
Sbjct: 204 NCGLAISGLSSILSR 218
>gi|154421279|ref|XP_001583653.1| hydrolase, NUDIX family protein [Trichomonas vaginalis G3]
gi|121917896|gb|EAY22667.1| hydrolase, NUDIX family protein [Trichomonas vaginalis G3]
Length = 191
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
++ LSNY F + E++ + R +++++ F G +SV ++L HEH + +L+L+
Sbjct: 5 IHKLSNYRFGASEDEEEEEKAHTDRMEKIKEIFAVEGTVKSVRCIILAHEHNITTILLLK 64
Query: 96 LGTTFF-KLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQ 154
++PGG + GE++ +KR+L+ +G E+ + D + W+RP F
Sbjct: 65 NKNKKKLQMPGGIVRTGEEDEAAIKRILTKKFRIVEG---EFDIGDHVATWYRPQFSEYL 121
Query: 155 YPYVPVHITSPKEHRRLFLVQLPERVPKNYK----LVAAPLVELYDNSQGYGPIISSLPQ 210
YPY+P HIT KE + ++V LPE+ N + L A +++++N + + +P
Sbjct: 122 YPYLPAHITQAKEIEKWYIVMLPEKAHFNIQSKNELSALQFIQIHNNVEYQEKTLLYIPA 181
Query: 211 ALCR 214
+ +
Sbjct: 182 IMSK 185
>gi|70948254|ref|XP_743664.1| mRNA cleavage factor-like protein [Plasmodium chabaudi chabaudi]
gi|56523269|emb|CAH76421.1| mRNA cleavage factor-like protein, putative [Plasmodium chabaudi
chabaudi]
Length = 241
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 21 INLISKNLQYNRKKN---LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSV 77
INL++ N+ K+ LYP +Y F+I + L +K ++++ + + K G+R +V
Sbjct: 10 INLLNANVASRENKSEWLLYPQDSYEFNIDEKLKKKFIIDTEKYKKRINSYNKNGIRNTV 69
Query: 78 DGVLLVHEHGLPHVLMLQ-LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGV---- 132
+LL H H PH+L+LQ L T + GG+ N E + LK+ L + + +
Sbjct: 70 IAILLCHRHEYPHLLLLQNLATQEYFFLGGKYNSWEKPRDVLKKKLQKYINKIKDIHFAV 129
Query: 133 --------------KQEWI-VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLP 177
K E V + +G WWR ++ Y+P HIT PKE RL+ V +
Sbjct: 130 NKLNINEQTADAKNKDELFDVGEFLGEWWRTQYDSVYLSYLPAHITRPKECARLYQVTIM 189
Query: 178 ER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+ +P + L A PL +L G IS L R
Sbjct: 190 PKCIFHLPPGFTLKAIPLFDL----NTCGIAISGLSSIFSR 226
>gi|440299573|gb|ELP92125.1| Cleavage and polyadenylation specificity factor subunit, putative
[Entamoeba invadens IP1]
Length = 262
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 36 LYPLSNYTFDIK-DPLFEKDSSVPARFQRMRDEFEKIGMRR-SVDGVLLVHEHGLPHVLM 93
+YP++NY + D K S R +R+ EK + R V GV+LV+ G P +L
Sbjct: 68 IYPITNYKIITQPDTSKIKLQSSHHRMDVLREFVEKNHVSRVCVYGVILVNNMGFPCLLT 127
Query: 94 LQ-----LGTTFFKLPGGELNQGEDE-IEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWR 147
LQ T +L GG+L GED+ +EGLKR + D L G+ + + + +G ++R
Sbjct: 128 LQPSKGSTATAESQLIGGKLKVGEDDPVEGLKRKMRDKLNLEYGI--HYDIGELLGVFYR 185
Query: 148 PNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGP 203
N++ YPY+P H+T PKE +++++ + E V + L + PL +L +N+ +
Sbjct: 186 INYDKYLYPYIPPHVTLPKEIIKVYMIHMKESCKFGVLDSVSLNSLPLYDLLNNTDLFDV 245
Query: 204 IISSLPQALCR 214
++ ++P + R
Sbjct: 246 VLCNIPTLISR 256
>gi|167386157|ref|XP_001737641.1| Cleavage and polyadenylation specificity factor subunit [Entamoeba
dispar SAW760]
gi|165899476|gb|EDR26062.1| Cleavage and polyadenylation specificity factor subunit, putative
[Entamoeba dispar SAW760]
Length = 240
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 22/195 (11%)
Query: 36 LYPLSNYTFDIKDPLFEK-DSSVPARFQRMRDEFEKIGM-RRSVDGVLLVHEHGLPHVLM 93
+YP+ NY D K+ L + + + ++++ EK + R SV GV+LVH++ PH+L+
Sbjct: 46 IYPIENYQIDKKEKLDKLKQQTFGYQMEQLKISVEKNHVPRTSVYGVILVHKNNFPHLLV 105
Query: 94 LQLGTTF-----FKLPGGELNQGEDE-IEGLKRLLSDTLGRRDGVKQEWI----VEDTIG 143
LQ + L GG L GED+ +EGLKR L R + E+I + + +G
Sbjct: 106 LQSNLSMNLKDEIHLVGGRLKIGEDDPVEGLKRKL------RKKMSMEYITHYEIGELLG 159
Query: 144 NWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQ 199
++R ++ YPY+PVHI+ KE ++++ L E ++ KL + PL L++N +
Sbjct: 160 TFYRIGYDKNLYPYIPVHISQVKEIINIYMIHLVEKCDFKIFDTDKLSSIPLFALHNNFE 219
Query: 200 GYGPIISSLPQALCR 214
Y + S+P + R
Sbjct: 220 KYNITLCSIPIMVSR 234
>gi|67479111|ref|XP_654937.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56472032|gb|EAL49551.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 255
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 74 RRSVDGVLLVHEHGLPHVLMLQLGTTF-----FKLPGGELNQGEDE-IEGLKRLLSDTLG 127
R SV GV+LVH++ PH+L+LQ + L GG L GED+ +EGLKR L
Sbjct: 101 RTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKL----- 155
Query: 128 RRDGVKQEWI----VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----R 179
R + E+I + + +G ++R ++ YPY+PVH++ KE ++++ L E +
Sbjct: 156 -RKKMSMEYITHYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFK 214
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+ KL + PL L++N + Y + S+P + R
Sbjct: 215 IFDTDKLSSIPLFALHNNFEKYNITLCSIPTLVSR 249
>gi|449703267|gb|EMD43749.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica KU27]
Length = 217
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 74 RRSVDGVLLVHEHGLPHVLMLQLGTTF-----FKLPGGELNQGEDE-IEGLKRLLSDTLG 127
R SV GV+LVH++ PH+L+LQ + L GG L GED+ +EGLKR L
Sbjct: 63 RTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKL----- 117
Query: 128 RRDGVKQEWI----VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----R 179
R + E+I + + +G ++R ++ YPY+PVH++ KE ++++ L E +
Sbjct: 118 -RKKMSMEYITHYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFK 176
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+ KL + PL L++N + Y + S+P + R
Sbjct: 177 IFDTDKLSSIPLFALHNNFEKYNITLCSIPTLVSR 211
>gi|349806027|gb|AEQ18486.1| putative cleavage and polyadenylation specific factor 5 protein
[Hymenochirus curtipes]
Length = 72
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 45/56 (80%), Gaps = 4/56 (7%)
Query: 163 TSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
PKEH++LFLVQL E+ VPKNYKLVAAPL ELYDN+ GYGPIISSLPQ L R
Sbjct: 12 VEPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSR 67
>gi|183232663|ref|XP_001913750.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica
HM-1:IMSS]
gi|32967089|gb|AAP92383.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica]
gi|169801938|gb|EDS89478.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 236
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 74 RRSVDGVLLVHEHGLPHVLMLQLGTTF-----FKLPGGELNQGEDE-IEGLKRLLSDTLG 127
R SV GV+LVH++ PH+L+LQ + L GG L GED+ +EGLKR L
Sbjct: 82 RTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKL----- 136
Query: 128 RRDGVKQEWI----VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----R 179
R + E+I + + +G ++R ++ YPY+PVH++ KE ++++ L E +
Sbjct: 137 -RKKMSMEYITHYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFK 195
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+ KL + PL L++N + Y + S+P + R
Sbjct: 196 IFDTDKLSSIPLFALHNNFEKYNITLCSIPTLVSR 230
>gi|407041326|gb|EKE40665.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
nuttalli P19]
Length = 247
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 74 RRSVDGVLLVHEHGLPHVLMLQLGTTF-----FKLPGGELNQGEDE-IEGLKRLLSDTLG 127
R SV GV+LVH++ PH+L+LQ + L GG L GED+ +EGLKR L
Sbjct: 93 RTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKL----- 147
Query: 128 RRDGVKQEWI----VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----R 179
R + E+I + + +G ++R ++ YPY+PVH++ KE ++++ L E +
Sbjct: 148 -RKKMSMEYITHYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFK 206
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
+ KL + PL L++N + Y + S+P + R
Sbjct: 207 IFDTDKLSSIPLFALHNNFEKYNITLCSIPTLVSR 241
>gi|406602004|emb|CCH46383.1| Cleavage and polyadenylation specificity factor subunit
[Wickerhamomyces ciferrii]
Length = 347
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 61/239 (25%)
Query: 33 KKNLYPLSNYTF-----------DIKDPLFEKDSSVPAR------------------FQR 63
+K +YPLSNYT ++K+ EK++ ++ F+
Sbjct: 79 EKKIYPLSNYTLTQKSYQPLKDHELKEDEAEKEALKESKQYKRKTYKSDLIPNNLLYFKN 138
Query: 64 MRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLS 123
++ + G RR + +++V P VL+L+ +PGG LN EDE G +R+L
Sbjct: 139 LKKYNDFYGTRRFLQFLIVVGGEKEPAVLLLKEHNQLI-VPGGYLNHDEDEKTGAERILK 197
Query: 124 D-----------------------TLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPV 160
+ T G V++ + +TI WWR + +P YPY+P
Sbjct: 198 ELFDEEELAAENGNGDANGTTNGATNGSAATVQEPLTIGETIARWWRTDLKPFVYPYLPR 257
Query: 161 HITSPKEHRRLFLVQLPE----RVPKNYKLVAA-PLVELYDNSQGYGPIISSLPQALCR 214
H+T PKE +L V LP+ P YK A PLV+LYD S+ P + S+P L +
Sbjct: 258 HVTRPKELIKLVYVDLPKTRKLSYPNFYKSFAPYPLVDLYDKSE---PELKSIPLFLSK 313
>gi|221052282|ref|XP_002257717.1| mrna cleavage factor-like protein [Plasmodium knowlesi strain H]
gi|193807548|emb|CAQ38053.1| mrna cleavage factor-like protein, putative [Plasmodium knowlesi
strain H]
Length = 257
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
+YP +NY F+I + L K + ++ + + + G+R S ++L H + PH+L+LQ
Sbjct: 43 VYPQANYEFNIVEKLKSKFIMDTDKIKKRINAYNQDGIRNSALAIILCHRYEYPHLLLLQ 102
Query: 96 -LGTTFFKLPGGELNQGEDEIEGLKRLLSDTL--------GRRDGVKQEWIVEDTI---- 142
+ + + L G+ E E LK+ L + G +E ED I
Sbjct: 103 NIESQTYHLLSGKYKSWEKPREVLKKKLQKYVNQIRDMHFGTSHFNTEEKETEDPIEIGE 162
Query: 143 --GNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAAPLVELYD 196
G WW+ F PY+P HIT PKE+ RL+ V L R +P + L A PL +L
Sbjct: 163 FLGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRCIFHLPPGFTLKALPLFDLST 222
Query: 197 NSQGYGPIISSLPQ 210
G + S L +
Sbjct: 223 CGVAIGGLTSVLSR 236
>gi|209877725|ref|XP_002140304.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555910|gb|EEA05955.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 231
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 17 VNRTINLIS---KNLQYNRKKNLYPLSNYTFDIKDP----LFEKDSSVPARFQRMRDEFE 69
VN T N + +N+ + +YPL NY + D L E + F + D F
Sbjct: 11 VNETTNEVEECPQNIDHEPTWLIYPLENYGIRVDDNPSENLMEDSIANMNGFNKKVDSFL 70
Query: 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLG-TTFFKLPGGELNQGEDE----IEGLKRLL-S 123
+ G+ RSV ++L H + PHV++LQ T+ + LP E+ + LK L +
Sbjct: 71 RDGIGRSVAALILTHRYLCPHVVLLQSDLTSEWMLPNCLYRAWENPRTVLVSFLKSLFFT 130
Query: 124 DTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPERV--- 180
D+ + + V + +G+WWR F PY+P H T PKE R++ V LP +V
Sbjct: 131 DSNSTENNTAE---VGEYLGSWWRTEFNYSPLPYLPPHSTRPKELIRIYQVLLPPKVLFK 187
Query: 181 -PKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
PK + L + PL +L N +G +PQ + R
Sbjct: 188 LPKYHVLKSLPLFDLDPNI--FGIACGGIPQLISR 220
>gi|224142912|ref|XP_002324776.1| predicted protein [Populus trichocarpa]
gi|222866210|gb|EEF03341.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Query: 112 EDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRL 171
D I+GLKR LS ++ DG W V D +G WWR +FE PY+P ++ PKE +L
Sbjct: 26 SDNIDGLKRKLSSSVNG-DGTDH-WEVGDCLGMWWRSDFETMLLPYLPHNVKVPKECMKL 83
Query: 172 FLVQLPER----VPKNYKLVAAPLVELYDNSQ 199
+LV+ PE VPKN KL+A PL ++++N +
Sbjct: 84 YLVRFPESRKFIVPKNLKLLAVPLCQVHENHK 115
>gi|170060713|ref|XP_001865923.1| pre-mRNA cleavage factor im, 25kD subunit [Culex quinquefasciatus]
gi|167879104|gb|EDS42487.1| pre-mRNA cleavage factor im, 25kD subunit [Culex quinquefasciatus]
Length = 74
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/35 (97%), Positives = 34/35 (97%)
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VPKNYKLVAAPL ELYDNSQGYGPIISSLPQALCR
Sbjct: 34 VPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCR 68
>gi|195490858|ref|XP_002093316.1| GE20837 [Drosophila yakuba]
gi|194179417|gb|EDW93028.1| GE20837 [Drosophila yakuba]
Length = 56
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/35 (97%), Positives = 34/35 (97%)
Query: 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VPKNYKLVAAPL ELYDNSQGYGPIISSLPQALCR
Sbjct: 16 VPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCR 50
>gi|156095009|ref|XP_001613540.1| mRNA cleavage factor-like protein [Plasmodium vivax Sal-1]
gi|148802414|gb|EDL43813.1| mRNA cleavage factor-like protein, putative [Plasmodium vivax]
Length = 267
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
+YP +NY F+I + L K + ++ + + + G+R S ++L H + PH+L+LQ
Sbjct: 59 VYPQANYEFNIDEKLKSKFVMDADKCKKRINTYNQNGIRSSALAIILCHRYEYPHLLLLQ 118
Query: 96 --LGTTFFKLPGG-------------ELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVED 140
T++ L G +L + ++I + S + + + +
Sbjct: 119 NVESQTYYLLSGKYRSWEKPRDVLKKKLQKYVNQIRDMHFATSHFNAEQKESEDPIEIGE 178
Query: 141 TIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPERV----PKNYKLVAAPLVELYD 196
+G WW+ F PY+P HIT PKE+ RL+ V L R P + L A PL +L
Sbjct: 179 FLGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRCIFHLPPGFTLKALPLFDLGS 238
Query: 197 NSQGYGPIISSL 208
G + S L
Sbjct: 239 CGVAIGGLTSVL 250
>gi|238601953|ref|XP_002395551.1| hypothetical protein MPER_04379 [Moniliophthora perniciosa FA553]
gi|215466474|gb|EEB96481.1| hypothetical protein MPER_04379 [Moniliophthora perniciosa FA553]
Length = 78
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%)
Query: 44 FDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKL 103
+ K+ E+D SV AR QR+++ +E GMRR+V+G+L+VH+HG PH+LMLQ+ FFKL
Sbjct: 19 YSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQIANAFFKL 78
>gi|84997093|ref|XP_953268.1| mRNA cleavage factor subunit [Theileria annulata strain Ankara]
gi|65304264|emb|CAI76643.1| mRNA cleavage factor subunit, putative [Theileria annulata]
Length = 226
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 34/204 (16%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPAR--FQRMRDE--------FEKIGMRRSVDGVLLVH 84
++YP + Y F E +S+ R R+ DE + GMR +V GV+L H
Sbjct: 24 DIYPQTMYKF-------EHNSTKVGRGLIFRLSDEILERRVKTYAVSGMRITVCGVILSH 76
Query: 85 EHGLPHVLMLQLG-TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIG 143
G P+VL+L+ L GG+ E+ E L L+ + K + ++DT+
Sbjct: 77 RKGFPYVLLLKRDLDKSVGLLGGKCKSFENPKEALSSKLARFITSTKH-KHQLNIKDTME 135
Query: 144 N---------WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAP 190
N +WR +F PY+P+H PKE L+ V LPE VPK Y L P
Sbjct: 136 NIHVGELLADFWRCDFNTEPLPYLPLHTNRPKEKISLYQVILPENCKISVPKGYNLKFVP 195
Query: 191 LVELYDNSQGYGPIISSLPQALCR 214
L + Y+ +G ++SLP L R
Sbjct: 196 LYDFYNAE--FGLSLASLPHLLSR 217
>gi|66475808|ref|XP_627720.1| NUDIX domain protein; mRNA cleavage factor-like protein Im like,
plant+animal group [Cryptosporidium parvum Iowa II]
gi|32398958|emb|CAD98423.1| hypothetical predicted protein, unknown function [Cryptosporidium
parvum]
gi|46229142|gb|EAK89991.1| NUDIX domain protein; mRNA cleavage factor-like protein Im like,
plant+animal group [Cryptosporidium parvum Iowa II]
Length = 277
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 45/231 (19%)
Query: 24 ISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPAR----FQRMRDEFEKIGMRRSVDG 79
++ N+ + +YPL NY ++D E SS+P F D F K G+ RSV
Sbjct: 41 MATNVDHEPSWLIYPLKNYGIRVQDNSDEIQSSIPINEMNGFNVKVDNFLKDGIGRSVAA 100
Query: 80 VLLVHEHGLPHVLMLQLG-TTFFKLPGGELNQGEDEIEGLKRLLSDTL------------ 126
++L H + PHV++LQ T+ + LP E+ L L
Sbjct: 101 LMLTHRYLCPHVVLLQNDLTSEWMLPNCTYKAWENPRIVLANFLKSMFLTSSSINSNTNN 160
Query: 127 -------------------GRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKE 167
D + V + +G WWR F PY+P H T PKE
Sbjct: 161 SGSNNGNNNSSTNNNNINNACSDNAVE---VGEYLGTWWRTEFNYSPLPYLPPHSTRPKE 217
Query: 168 HRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
R++ V LP ++PK++ L + PL +L N +G S+PQ + R
Sbjct: 218 TIRIYQVILPPKLLFKLPKHHVLKSLPLFDLDPNI--FGIACGSIPQLISR 266
>gi|67609483|ref|XP_667008.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658093|gb|EAL36777.1| hypothetical protein Chro.60436 [Cryptosporidium hominis]
Length = 277
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 90/219 (41%), Gaps = 45/219 (20%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPAR----FQRMRDEFEKIGMRRSVDGVLLVHEHGLPHV 91
+YPL NY ++D E SS+P F D F K G+ RSV ++L H + PHV
Sbjct: 53 IYPLKNYGIRVQDNSDEIQSSIPINEMNGFNGKVDNFLKDGIGRSVAALMLTHRYLCPHV 112
Query: 92 LMLQLG-TTFFKLPGGELNQGEDEIEGLKRLLSDTL------------------------ 126
++LQ T+ + LP E+ L L
Sbjct: 113 VLLQNDLTSEWMLPNCTYKAWENPRIVLANFLKSMFLTSSSINSNTNSSGSNSGNNNSST 172
Query: 127 -------GRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE- 178
D + V + +G WWR F PY+P H T PKE R++ V LP
Sbjct: 173 NNNNINNACSDNAVE---VGEYLGTWWRTEFNYSPLPYLPPHSTRPKETIRIYQVILPPK 229
Query: 179 ---RVPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
++PK++ L + PL +L N +G S+PQ + R
Sbjct: 230 LLFKLPKHHVLKSLPLFDLDPNI--FGIACGSIPQLISR 266
>gi|161899559|ref|XP_001713005.1| pre-mRNA cleavage factor I [Bigelowiella natans]
gi|75756500|gb|ABA27393.1| pre-mRNA cleavage factor I [Bigelowiella natans]
Length = 202
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 33/200 (16%)
Query: 36 LYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQ 95
YP+ NY F + KD + + QR++ +F K G S +++V +H P+VL+ +
Sbjct: 4 FYPIENYKFYTSKAVKRKDRKMRHKLQRLKYKFLKFGSFASRKSIVIVTKHKHPYVLLFR 63
Query: 96 LGTTFFKLPGGELNQGED--EIEGLKRLLSDTLGR-----RDGVKQEWIVEDT----IGN 144
N D +I+ L + SD L + + V + + +
Sbjct: 64 -----------SFNDKFDIIDIDKLLKFKSDHLKKVNLENVNNVSKNLFTKSMNSRLVSI 112
Query: 145 WWRPNFEPPQYPYVPVHITSPKE----------HRRLFLVQLPERVPKNYKLVAAPLVEL 194
+ R FE YPY HI K+ LF V L ++PKN+++ A P E+
Sbjct: 113 FLRQGFESKLYPYCLPHIKYTKQIFFVYLNFLKKNELFQVLLSSKIPKNFEVKAFPFFEI 172
Query: 195 YDNSQGYGPIISSLPQALCR 214
Y N+ YG II+S+P + +
Sbjct: 173 YLNNY-YGAIINSIPTMVSK 191
>gi|403223795|dbj|BAM41925.1| mRNA cleavage factor subunit [Theileria orientalis strain Shintoku]
Length = 225
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 35 NLYPLSNYTFDIKDP------LFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGL 88
++YP + Y FD +F V ++ R+R + GMR +V GV+L H G
Sbjct: 24 DVYPQTIYKFDYNTTKVGSGLIFRLSDEVLSK--RVR-SYMVSGMRITVCGVILSHIKGF 80
Query: 89 PHVLMLQL-GTTFFKLPGGELNQGEDEIEGLK----RLLSDTLGRRDGVKQEWI----VE 139
P VL++Q G L GG+ E+ E L R ++ T R +E + V
Sbjct: 81 PSVLLVQREGDRSLGLLGGKCKSFENPKEALSAKLARFITSTKHRHQINIKEDVENIQVG 140
Query: 140 DTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELY 195
D +G+ WR +F PY+P+H PKE L+ V + E VP+ + L PL + Y
Sbjct: 141 DLLGDLWRCDFNTEPLPYLPLHSNRPKEKISLYQVTVSENCKISVPRGFTLRFVPLYDFY 200
Query: 196 DNSQGYGPIISSLPQALCR 214
+ +G I ++P L R
Sbjct: 201 NPE--FGLSIGAIPHLLSR 217
>gi|156088887|ref|XP_001611850.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799104|gb|EDO08282.1| conserved hypothetical protein [Babesia bovis]
Length = 357
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 24/198 (12%)
Query: 36 LYPLSNYTF-DIKDP-----LFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLP 89
+YP +Y+F D P LF S+ + R+R + + G+R +V G++L H +G P
Sbjct: 20 VYPEDSYSFRDDSAPIGQGLLFRTPESLLCK--RIR-AYNQNGLRITVYGLILCHRNGFP 76
Query: 90 HVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG-RRDGVKQ--------EWIVED 140
+L+L+ + L GG+ E+ E LK L+ + R GV Q IV +
Sbjct: 77 CILVLRDTSGNIGLLGGKCKSFENPREVLKLKLARFVSTSRKGVHQLNVRANVDTIIVGE 136
Query: 141 TIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPERV----PKNYKLVAAPLVELYD 196
+G +WR ++ PY+P+HI P+E ++ V L E+ P + + L E Y
Sbjct: 137 FMGEFWRAEYDSDVLPYLPLHINRPREKILIYQVTLREQCSFIAPGDMHIEPMALHEFYC 196
Query: 197 NSQGYGPIISSLPQALCR 214
Q IS+LP L R
Sbjct: 197 AEQSVA--ISALPHLLTR 212
>gi|71029236|ref|XP_764261.1| mRNA cleavage factor protein [Theileria parva strain Muguga]
gi|68351215|gb|EAN31978.1| mRNA cleavage factor protein, putative [Theileria parva]
Length = 226
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 72 GMRRSVDGVLLVHEHGLPHVLMLQLG-TTFFKLPGGELNQGEDEIE----GLKRLLSDTL 126
GMR +V GV+L H G P VL+L+ L GG+ E+ E L R ++ T
Sbjct: 64 GMRITVCGVILSHRKGFPFVLLLKRDLDKSVGLLGGKCKSFENPKEVLSSKLARFITSTK 123
Query: 127 GRRDGVKQEWI----VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE---- 178
+ +E I V + + ++WR +F PY+P+H PKE L+ V L E
Sbjct: 124 HKHQLNIKETIETIQVGELLADFWRCDFNTEPLPYLPLHTNRPKEKISLYQVVLQESCKI 183
Query: 179 RVPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
VPK Y L PL + Y+ +G + SLP L R
Sbjct: 184 SVPKGYSLKFVPLYDFYNPE--FGLSLGSLPHLLSR 217
>gi|183232665|ref|XP_001913751.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica
HM-1:IMSS]
gi|169801939|gb|EDS89479.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 129
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 15/121 (12%)
Query: 103 LPGGELNQGEDE-IEGLKRLLSDTLGRRDGVKQEWI----VEDTIGNWWRPNFEPPQYPY 157
L GG L GED+ +EGLKR L R + E+I + + +G ++R ++ YPY
Sbjct: 9 LVGGRLKIGEDDPVEGLKRKL------RKKMSMEYITHYEIGELLGTFYRIEYDKNLYPY 62
Query: 158 VPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIISSLPQALC 213
+PVH++ KE ++++ L E ++ KL + PL L++N + Y + S+P +
Sbjct: 63 IPVHVSQVKEIINIYMIHLVEKCDFKIFDTDKLSSIPLFALHNNFEKYNITLCSIPTLVS 122
Query: 214 R 214
R
Sbjct: 123 R 123
>gi|62318512|dbj|BAD94845.1| hypothetical protein [Arabidopsis thaliana]
Length = 56
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 35 NLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLV 83
N YPLSNY+F K+P EKD+SV R RM+ + K GMR SV+G+LLV
Sbjct: 8 NTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLV 56
>gi|221504441|gb|EEE30114.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Toxoplasma
gondii VEG]
Length = 414
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 68 FEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTT----FFKLPGGELNQGEDEIE-GLKRLL 122
+++ G+RR+V V H H+L+L T F + E +E L RL
Sbjct: 173 YQRQGLRRTVAPVFFCHLREYVHLLLLFHRETRRYSLFTFKAKSWERPEVVLERKLARLF 232
Query: 123 SDTLGRRD-GVKQEWI-----------VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRR 170
+ D V W+ V + +G WWR F+ P++P H+T PKE R
Sbjct: 233 TKHRSEVDRNVNYTWVADQKSEGVAAEVGEFLGEWWRVEFDEEPQPFLPPHVTRPKERIR 292
Query: 171 LFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
L+ VQLP R+P + L A PL +L + +G +S LP + R
Sbjct: 293 LYQVQLPPKCSFRLPPAFSLAALPLFDLL-RPEIHGVALSGLPHVVSR 339
>gi|237841303|ref|XP_002369949.1| mRNA cleavage factor-like protein, putative [Toxoplasma gondii
ME49]
gi|211967613|gb|EEB02809.1| mRNA cleavage factor-like protein, putative [Toxoplasma gondii
ME49]
Length = 414
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 68 FEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTT----FFKLPGGELNQGEDEIE-GLKRLL 122
+++ G+RR+V V H H+L+L T F + E +E L RL
Sbjct: 173 YQRQGLRRTVAPVFFCHLREYVHLLLLFHRETRRYSLFTFKAKSWERPEVVLERKLARLF 232
Query: 123 SDTLGRRD-GVKQEWIVE-----------DTIGNWWRPNFEPPQYPYVPVHITSPKEHRR 170
+ D V W+ + + +G WWR F+ P++P H+T PKE R
Sbjct: 233 TKHRSEVDRNVNYTWVADQKSEGVAAEVGEFLGEWWRVEFDEEPQPFLPPHVTRPKERIR 292
Query: 171 LFLVQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
L+ VQLP R+P + L A PL +L + +G +S LP + R
Sbjct: 293 LYQVQLPPKCSFRLPPAFSLAALPLFDLL-RPEIHGVALSGLPHVVSR 339
>gi|429329523|gb|AFZ81282.1| mRNA cleavage factor-like protein, putative [Babesia equi]
Length = 186
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 62 QRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTT-FFKLPGGELNQGEDEIEGLKR 120
+R+R + + GMR +V G+++ H G+PHVL+L+ + L GG+ E+ E L
Sbjct: 53 KRLRS-YSRSGMRTTVCGLIMCHSQGVPHVLLLKREEDGCYGLLGGKCKIYENPREKLSH 111
Query: 121 LLS-------------DTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKE 167
L+ D + +K V++ + +WWR ++ P++P+H + PKE
Sbjct: 112 KLARFITCNTRHANLYDIKSSIENIK----VKEFLADWWRCDYHTDPLPFLPLHTSRPKE 167
Query: 168 HRRLFLVQLP 177
++ V P
Sbjct: 168 KISIYQVCTP 177
>gi|221482388|gb|EEE20736.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Toxoplasma
gondii GT1]
Length = 419
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 68 FEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTT----FFKLPGGELNQGEDEIE-GLKRLL 122
+++ G+RR+V V H H+L+L T F + E +E L RL
Sbjct: 173 YQRQGLRRTVAPVFFCHLREYVHLLLLFHRETRRYSLFTFKAKSWERPEVVLERKLARLF 232
Query: 123 SDTLGRRD-GVKQEWI-----------VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRR 170
+ D V W+ V + +G WWR F+ P++P H+T PKE R
Sbjct: 233 TKHRSEVDRNVNYTWVADQKSEGVAAEVGEFLGEWWRVEFDEEPQPFLPPHVTRPKERIR 292
Query: 171 LFL-----VQLPE----RVPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214
L L VQLP R+P + L A PL +L + +G +S LP + R
Sbjct: 293 LRLFLLSQVQLPPKCSFRLPPAFSLAALPLFDLL-RPEIHGVALSGLPHVVSR 344
>gi|389581861|dbj|GAB64582.1| mRNA cleavage factor-like protein, partial [Plasmodium cynomolgi
strain B]
Length = 159
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 19/139 (13%)
Query: 89 PHVLMLQ-LGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGR-RD--------GVKQEWI- 137
PH+L+LQ + + + L G+ E E LKR L + + RD +Q+ I
Sbjct: 4 PHLLLLQNIESQEYYLLSGKYRSWEKPREVLKRKLQKYVNQIRDMHFSTSHLNSEQKEIE 63
Query: 138 ----VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----VPKNYKLVAA 189
+ + +G WW+ F PY+P HIT PKE+ RL+ V L R +P + L A
Sbjct: 64 DPIEIGEFLGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRSIFHLPPGFTLKAL 123
Query: 190 PLVELYDNSQGYGPIISSL 208
PL +L + G + S L
Sbjct: 124 PLFDLGNCGVAIGGLTSVL 142
>gi|399218569|emb|CCF75456.1| unnamed protein product [Babesia microti strain RI]
Length = 313
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 66 DEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDT 125
D + + GMR S+ ++L H+H H+L ++ L GG+ + E L+ L
Sbjct: 38 DRYNRDGMRHSLFALILCHKHNFCHLLAVKNAKGELCLLGGKKTLYNSDKECLRSKLQKY 97
Query: 126 LGRRDGVKQEWIVE---------DTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQL 176
+ +K + + WW+ + PY+P H ++ E +F V +
Sbjct: 98 IRPPKSLKNSLDIAAFDSHVEIGQVVAQWWKTKVDGRYLPYIPPHASTCVETATIFQVTV 157
Query: 177 PE----RVPKNYKLVAAPLVELYD 196
++P + LVA L++L +
Sbjct: 158 QPGCIFQLPPGHTLVAVSLIDLME 181
>gi|448634595|ref|ZP_21674993.1| NUDIX hydrolase [Haloarcula vallismortis ATCC 29715]
gi|445749568|gb|EMA01013.1| NUDIX hydrolase [Haloarcula vallismortis ATCC 29715]
Length = 151
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 44 FDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKL 103
F + P + +S A R+R + + RS D VLLV E+ GT F+ L
Sbjct: 4 FHVSKPTVDPTTSDLATGGRLRSGAK--ALIRSSDLVLLVREYHAD-------GTPFWTL 54
Query: 104 PGGELNQGEDEIEGLKRLLSDTLGRRDGVKQ 134
PGG + GED+ E L+R L + LG R +++
Sbjct: 55 PGGGIQAGEDDREALERELVEELGCRSVIRK 85
>gi|401397366|ref|XP_003880035.1| hypothetical protein NCLIV_004770 [Neospora caninum Liverpool]
gi|325114444|emb|CBZ50000.1| hypothetical protein NCLIV_004770 [Neospora caninum Liverpool]
Length = 402
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 138 VEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVE 193
V + +G W+ F+ P++P H+T PKE RL+ V LP R+P + L A PL +
Sbjct: 253 VGEFLGELWKSEFDEEPRPFLPPHVTRPKEKIRLYQVLLPPTCSFRLPPAFSLAAIPLCD 312
Query: 194 L 194
L
Sbjct: 313 L 313
>gi|449703266|gb|EMD43748.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica KU27]
Length = 151
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 74 RRSVDGVLLVHEHGLPHVLMLQLGTTF-----FKLPGGELNQGEDE-IEGLKRLL 122
R SV GV+LVH++ PH+L+LQ + L GG L GED+ +EGLKR L
Sbjct: 94 RTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKL 148
>gi|330040399|ref|XP_003239893.1| hypothetical protein CPARA_3gp337 [Cryptomonas paramecium]
gi|327206819|gb|AEA38995.1| hypothetical protein CPARA_3gp337 [Cryptomonas paramecium]
Length = 198
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 36 LYPLSNYTF---DIKDPLFEKDS--SVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPH 90
+Y +S+YTF + KD + K + ++ +R E + +R + V+L++ PH
Sbjct: 12 IYQISSYTFLNKNAKDVKWSKSKVLKIYTNYEVLR---EFLAPKRYISFVILINIGDFPH 68
Query: 91 VLMLQLG-TTFFKLPGGEL---NQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDT-IGNW 145
+L+++ F +PG L N+ + + L+ L ++ +K+ I ++T IG+W
Sbjct: 69 ILLIRSKYEKVFYIPGSRLSISNKSKIKYSFLE------LQKKLNLKKPNIAKNTYIGSW 122
Query: 146 WRPNFEP-PQYPYVPVHITSPKEHRRLFLVQLPE----RVPKNYKLVAAPLVELYDNSQG 200
P E +YP+ P HI K+ ++ VQ + +V + L A +L+ N +
Sbjct: 123 IFPEKESRVKYPFFPPHIKKEKKEIKVQFVQFKDQGKIQVNSKWDLYAVLPFKLFANKKR 182
Query: 201 YGPIIS 206
Y I++
Sbjct: 183 YKVILA 188
>gi|150017272|ref|YP_001309526.1| NUDIX hydrolase [Clostridium beijerinckii NCIMB 8052]
gi|149903737|gb|ABR34570.1| NUDIX hydrolase [Clostridium beijerinckii NCIMB 8052]
Length = 179
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Query: 48 DPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGE 107
+ LFE D ++ D EKI R +V G+++ + +LM+ +K PGG
Sbjct: 6 NKLFEID--------KVSDSIEKINFREAVRGIIIKDKK----ILMVHSKNKDYKFPGGG 53
Query: 108 LNQGEDEIEGLKRLLSDTLG 127
+ + E I+ LKR + + G
Sbjct: 54 MKKDEGHIDALKREVEEETG 73
>gi|441503193|ref|ZP_20985200.1| MutT/nudix family protein [Photobacterium sp. AK15]
gi|441429409|gb|ELR66864.1| MutT/nudix family protein [Photobacterium sp. AK15]
Length = 179
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 21/96 (21%)
Query: 74 RRSVDGVLLVHEHGLPHVLMLQLGTTF-FKLPGGELNQGEDEIEGLKRLLSDTLGRRD-- 130
R++ G++L E +LML + LPGG +++GED +EGL R L + G R+
Sbjct: 22 RKAARGIILNGED----ILMLYTERYHDYTLPGGGIDEGEDAVEGLIRELEEETGARNIR 77
Query: 131 -----GVKQEWIVEDTIGNWWRPNFE---PPQYPYV 158
G+ +E+ W++P+F+ Y YV
Sbjct: 78 DITSFGIYEEY------RPWYKPDFDIMHMESYCYV 107
>gi|399527979|ref|ZP_10767650.1| NUDIX domain protein [Actinomyces sp. ICM39]
gi|398361470|gb|EJN45228.1| NUDIX domain protein [Actinomyces sp. ICM39]
Length = 139
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 101 FKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWW 146
F+LPGG++ GED L R +++ LG R + + ED G WW
Sbjct: 35 FELPGGKVEDGEDPTAALTREIAEELGARVIIGERVCPED--GQWW 78
>gi|90576575|ref|YP_534817.1| putative nudix hydrolase [Pseudomonas putida]
gi|374325471|ref|YP_005083669.1| hypothetical protein pYIC_30 [Pseudomonas sp. MC1]
gi|90567928|dbj|BAE92151.1| putative nudix hydrolase [Pseudomonas putida]
gi|359392995|gb|AEV45871.1| hypothetical protein pYIC_30 [Pseudomonas sp. MC1]
Length = 177
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 101 FKLPGGELNQGEDEIEGLKRLLSDTLGRRD-GVKQEWIVEDTIGNWWRPNFE 151
F PGG L+ GED I GLKR L + G R+ V Q + + +W+P ++
Sbjct: 46 FSFPGGGLDAGEDIIVGLKRELEEETGAREIRVLQHYGYIEEYRPYWKPEYD 97
>gi|385260507|ref|ZP_10038652.1| NUDIX domain protein [Streptococcus sp. SK140]
gi|385191177|gb|EIF38597.1| NUDIX domain protein [Streptococcus sp. SK140]
Length = 149
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 87 GLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG 127
L ++++Q + LPGGE+ GED E LKR L + LG
Sbjct: 29 ALEKIILVQAPNGAWFLPGGEIEAGEDHFEALKRELIEELG 69
>gi|399525243|ref|ZP_10765704.1| NUDIX domain protein [Atopobium sp. ICM58]
gi|398373365|gb|EJN51308.1| NUDIX domain protein [Atopobium sp. ICM58]
Length = 139
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 101 FKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWW 146
F+LPGG++ +GED + L+R +++ LG R V + V G WW
Sbjct: 35 FELPGGKIEEGEDAVTALEREIAEELGARLRVGER--VAPEGGLWW 78
>gi|440722344|ref|ZP_20902726.1| NUDIX hydrolase [Pseudomonas syringae BRIP34876]
gi|440726057|ref|ZP_20906315.1| NUDIX hydrolase [Pseudomonas syringae BRIP34881]
gi|440361533|gb|ELP98760.1| NUDIX hydrolase [Pseudomonas syringae BRIP34876]
gi|440367440|gb|ELQ04503.1| NUDIX hydrolase [Pseudomonas syringae BRIP34881]
Length = 177
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129
+I R + G+++ E L L+ F PGG L+ ED + GLKR L + G R
Sbjct: 18 RIFRRHAARGIVMRDEQIL---LLFTERYNDFSFPGGGLDDDEDIVTGLKRELEEETGAR 74
Query: 130 D-GVKQEWIVEDTIGNWWRPNFE 151
D V Q + + +W+P ++
Sbjct: 75 DIQVLQHYGYIEEYRPYWKPQYD 97
>gi|414157077|ref|ZP_11413377.1| hypothetical protein HMPREF9186_01797 [Streptococcus sp. F0442]
gi|410868393|gb|EKS16358.1| hypothetical protein HMPREF9186_01797 [Streptococcus sp. F0442]
Length = 149
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 80 VLLVHEHGL---------PHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLG 127
V VH +G+ ++++Q + LPGGE+ +GED ++ LKR L + LG
Sbjct: 13 VTYVHRYGVYAVIPNKDRDQIILVQAPNGAWFLPGGEIEKGEDHLQALKRELIEELG 69
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,638,731,670
Number of Sequences: 23463169
Number of extensions: 157067552
Number of successful extensions: 349369
Number of sequences better than 100.0: 383
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 348395
Number of HSP's gapped (non-prelim): 417
length of query: 214
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 78
effective length of database: 9,168,204,383
effective search space: 715119941874
effective search space used: 715119941874
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)