Query psy16776
Match_columns 214
No_of_seqs 142 out of 184
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 21:45:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16776.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16776hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bho_A Cleavage and polyadenyl 100.0 1E-85 3.5E-90 565.1 15.0 191 24-214 8-202 (208)
2 3i7u_A AP4A hydrolase; nudix p 99.3 4.9E-12 1.7E-16 98.3 8.7 64 73-145 1-65 (134)
3 2pbt_A AP4A hydrolase; nudix p 99.2 1.1E-10 3.7E-15 87.8 8.9 50 90-145 16-65 (134)
4 3eds_A MUTT/nudix family prote 99.2 1.2E-10 3.9E-15 91.2 8.9 79 59-145 5-83 (153)
5 1vcd_A NDX1; nudix protein, di 99.1 1.4E-10 4.9E-15 86.4 8.4 64 73-145 1-64 (126)
6 3gwy_A Putative CTP pyrophosph 99.1 3.1E-10 1.1E-14 86.9 9.0 62 75-145 6-74 (140)
7 3f13_A Putative nudix hydrolas 99.1 3.5E-10 1.2E-14 90.9 9.7 64 75-147 16-79 (163)
8 3id9_A MUTT/nudix family prote 99.1 5.5E-10 1.9E-14 88.2 10.1 73 67-149 16-90 (171)
9 2fvv_A Diphosphoinositol polyp 99.1 1.8E-10 6.1E-15 95.3 7.3 74 67-147 33-108 (194)
10 1ktg_A Diadenosine tetraphosph 99.1 6.7E-10 2.3E-14 84.0 9.2 68 74-144 3-73 (138)
11 3son_A Hypothetical nudix hydr 99.1 2.5E-10 8.5E-15 88.1 6.6 58 72-129 1-61 (149)
12 3oga_A Nucleoside triphosphata 99.1 6.1E-10 2.1E-14 87.5 9.0 59 68-128 20-84 (165)
13 3u53_A BIS(5'-nucleosyl)-tetra 99.0 3.2E-10 1.1E-14 88.8 6.6 53 77-129 5-66 (155)
14 2azw_A MUTT/nudix family prote 99.0 4.6E-10 1.6E-14 85.7 7.3 107 74-196 18-129 (148)
15 3gg6_A Nudix motif 18, nucleos 99.0 5.7E-10 2E-14 86.6 7.8 66 72-146 18-87 (156)
16 3f6a_A Hydrolase, nudix family 99.0 3.6E-10 1.2E-14 88.4 6.6 61 74-143 5-66 (159)
17 3i9x_A MUTT/nudix family prote 99.0 3.7E-10 1.3E-14 91.3 6.8 69 74-148 27-110 (187)
18 2yyh_A MUTT domain, 8-OXO-DGTP 99.0 1.7E-09 6E-14 82.4 9.2 69 73-147 8-79 (139)
19 3cng_A Nudix hydrolase; struct 99.0 2.3E-09 8E-14 87.1 10.4 65 74-148 40-108 (189)
20 3grn_A MUTT related protein; s 99.0 7.4E-10 2.5E-14 86.0 6.8 63 74-145 8-76 (153)
21 3h95_A Nucleoside diphosphate- 99.0 2.4E-09 8.2E-14 87.7 10.0 63 74-144 26-91 (199)
22 2pqv_A MUTT/nudix family prote 99.0 1.3E-09 4.4E-14 84.5 7.8 62 73-145 18-79 (154)
23 3shd_A Phosphatase NUDJ; nudix 99.0 1.1E-09 3.8E-14 84.6 7.2 50 90-145 17-69 (153)
24 2fb1_A Conserved hypothetical 99.0 1.3E-09 4.5E-14 92.1 8.1 70 73-148 12-85 (226)
25 3gz5_A MUTT/nudix family prote 98.9 1.5E-09 5.3E-14 92.6 8.1 72 74-151 22-99 (240)
26 1sjy_A MUTT/nudix family prote 98.9 2.1E-09 7.1E-14 83.1 8.0 64 74-146 13-84 (159)
27 2b0v_A Nudix hydrolase; struct 98.9 2E-09 6.9E-14 82.7 7.8 50 90-145 20-73 (153)
28 1nqz_A COA pyrophosphatase (MU 98.9 7.3E-10 2.5E-14 89.7 5.5 59 70-129 30-94 (194)
29 1mut_A MUTT, nucleoside tripho 98.9 7E-10 2.4E-14 82.6 5.0 51 75-128 5-60 (129)
30 3ees_A Probable pyrophosphohyd 98.9 3.2E-09 1.1E-13 81.1 8.7 62 74-144 21-87 (153)
31 4dyw_A MUTT/nudix family prote 98.9 2.6E-09 8.9E-14 83.9 8.4 62 74-145 29-94 (157)
32 3r03_A Nudix hydrolase; struct 98.9 3E-09 1E-13 80.9 8.0 40 90-129 21-65 (144)
33 2rrk_A ORF135, CTP pyrophospho 98.9 3.1E-09 1.1E-13 80.3 8.1 62 75-145 9-75 (140)
34 3hhj_A Mutator MUTT protein; n 98.9 3.3E-09 1.1E-13 82.6 8.2 53 74-129 29-86 (158)
35 1k2e_A Nudix homolog; nudix/MU 98.9 1.4E-09 4.8E-14 85.2 5.7 59 75-143 2-61 (156)
36 3q93_A 7,8-dihydro-8-oxoguanin 98.9 2.3E-09 7.8E-14 86.4 7.0 63 74-145 24-90 (176)
37 2w4e_A MUTT/nudix family prote 98.9 1.2E-09 4.1E-14 84.8 4.9 52 75-128 5-61 (145)
38 3q1p_A Phosphohydrolase (MUTT/ 98.9 4.2E-09 1.4E-13 87.1 8.4 64 74-147 68-132 (205)
39 3o8s_A Nudix hydrolase, ADP-ri 98.9 6E-09 2.1E-13 86.2 8.7 63 74-146 70-132 (206)
40 3fk9_A Mutator MUTT protein; s 98.9 3.8E-09 1.3E-13 86.3 7.1 52 73-128 3-55 (188)
41 2o1c_A DATP pyrophosphohydrola 98.9 3.6E-09 1.2E-13 80.4 6.5 52 75-128 10-63 (150)
42 1f3y_A Diadenosine 5',5'''-P1, 98.9 2.7E-09 9.2E-14 82.5 5.9 54 72-128 12-67 (165)
43 2fkb_A Putative nudix hydrolas 98.8 8.5E-09 2.9E-13 81.9 8.6 58 70-129 32-96 (180)
44 1rya_A GDP-mannose mannosyl hy 98.8 5E-09 1.7E-13 81.0 6.8 55 72-129 16-74 (160)
45 2kdv_A RNA pyrophosphohydrolas 98.8 4.1E-09 1.4E-13 84.0 6.0 54 72-128 6-60 (164)
46 2yvp_A NDX2, MUTT/nudix family 98.8 1.9E-09 6.6E-14 86.2 3.8 50 77-128 43-97 (182)
47 1v8y_A ADP-ribose pyrophosphat 98.8 1.6E-08 5.3E-13 80.2 8.6 61 76-146 35-100 (170)
48 2fml_A MUTT/nudix family prote 98.8 1.5E-08 5E-13 88.1 9.0 56 73-128 38-99 (273)
49 1hzt_A Isopentenyl diphosphate 98.8 7.9E-09 2.7E-13 83.5 6.2 58 70-129 27-91 (190)
50 1vhz_A ADP compounds hydrolase 98.8 1.2E-08 4E-13 84.3 7.3 102 74-197 48-160 (198)
51 2b06_A MUTT/nudix family prote 98.8 1.3E-08 4.3E-13 78.7 6.6 65 74-145 8-76 (155)
52 3fcm_A Hydrolase, nudix family 98.8 1.1E-08 3.6E-13 83.5 6.4 54 75-129 45-99 (197)
53 3exq_A Nudix family hydrolase; 98.8 1.3E-08 4.6E-13 80.1 6.7 63 76-145 11-77 (161)
54 2jvb_A Protein PSU1, mRNA-deca 98.7 1.3E-08 4.3E-13 78.0 5.3 52 77-129 6-58 (146)
55 3kvh_A Protein syndesmos; NUDT 98.7 8.1E-09 2.8E-13 88.6 4.5 108 71-197 18-149 (214)
56 1mk1_A ADPR pyrophosphatase; n 98.7 2.2E-08 7.6E-13 82.7 6.9 62 76-145 44-111 (207)
57 2a6t_A SPAC19A8.12; alpha/beta 98.6 3.8E-08 1.3E-12 85.8 7.0 56 73-129 99-156 (271)
58 1x51_A A/G-specific adenine DN 98.6 3.5E-08 1.2E-12 76.8 5.8 55 73-127 18-78 (155)
59 3fjy_A Probable MUTT1 protein; 98.6 7.8E-08 2.7E-12 85.9 8.7 54 86-145 35-89 (364)
60 2dsc_A ADP-sugar pyrophosphata 98.6 7.2E-08 2.5E-12 79.9 7.9 53 76-128 63-121 (212)
61 1vk6_A NADH pyrophosphatase; 1 98.6 9.4E-08 3.2E-12 83.6 8.9 62 76-145 140-204 (269)
62 1q27_A Putative nudix hydrolas 98.6 5.7E-08 1.9E-12 76.5 6.8 53 74-129 34-93 (171)
63 2qjo_A Bifunctional NMN adenyl 98.6 6.3E-08 2.2E-12 84.2 7.5 51 74-128 203-257 (341)
64 3e57_A Uncharacterized protein 98.6 7.1E-08 2.4E-12 82.3 7.1 67 70-145 62-144 (211)
65 2qjt_B Nicotinamide-nucleotide 98.6 7.8E-08 2.7E-12 84.3 7.2 51 75-129 209-263 (352)
66 1g0s_A Hypothetical 23.7 kDa p 98.6 8.8E-08 3E-12 79.6 6.8 102 75-196 57-178 (209)
67 1u20_A U8 snoRNA-binding prote 98.6 2E-07 6.7E-12 77.8 8.4 63 66-128 25-96 (212)
68 3fsp_A A/G-specific adenine gl 98.5 6.5E-08 2.2E-12 87.4 3.8 49 89-144 252-305 (369)
69 3o6z_A GDP-mannose pyrophospha 98.5 2E-07 6.9E-12 76.1 6.2 53 75-129 45-108 (191)
70 1q33_A Pyrophosphatase, ADP-ri 98.5 2.5E-07 8.6E-12 81.4 7.2 42 88-129 138-180 (292)
71 2xsq_A U8 snoRNA-decapping enz 98.3 6.2E-07 2.1E-11 75.8 4.7 39 90-128 66-105 (217)
72 3q91_A Uridine diphosphate glu 98.2 7.5E-07 2.5E-11 75.5 4.2 32 98-129 94-126 (218)
73 3qsj_A Nudix hydrolase; struct 98.2 7.7E-07 2.6E-11 76.5 3.8 57 73-129 7-90 (232)
74 2dho_A Isopentenyl-diphosphate 98.0 8.4E-06 2.9E-10 69.6 6.4 58 70-129 54-127 (235)
75 2pny_A Isopentenyl-diphosphate 97.9 1.3E-05 4.6E-10 68.9 6.1 58 70-129 65-138 (246)
76 3rh7_A Hypothetical oxidoreduc 97.6 7.4E-05 2.5E-09 67.0 6.6 65 71-149 180-245 (321)
77 3dup_A MUTT/nudix family prote 97.5 0.00012 4E-09 65.4 6.3 60 70-129 113-180 (300)
78 2qlc_A DNA repair protein RADC 60.7 2.4 8E-05 33.0 0.7 51 70-140 61-114 (126)
79 3l6w_A Hemocyanin 1; cupredoxi 56.7 76 0.0026 30.1 10.3 118 67-194 298-429 (491)
80 1kvd_B SMK toxin; halotolerant 27.2 1.6E+02 0.0055 20.6 6.5 65 42-114 7-73 (77)
81 3fk8_A Disulphide isomerase; A 23.6 56 0.0019 23.1 2.9 27 86-112 90-117 (133)
No 1
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=100.00 E-value=1e-85 Score=565.09 Aligned_cols=191 Identities=76% Similarity=1.339 Sum_probs=182.3
Q ss_pred eccccccccceeEeecCceEeccCCCcccCCCChHHHHHHhHHHHhhcCceeEEEEEEEEecCCCCEEEEEEccCceeee
Q psy16776 24 ISKNLQYNRKKNLYPLSNYTFDIKDPLFEKDSSVPARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKL 103 (214)
Q Consensus 24 ~~~~~~~~~~~~iYpl~nY~F~~k~~~~ekd~sv~~Rl~rl~~~y~~~GmRrsV~aVilvh~~~~phVLLLQ~~~~~f~L 103 (214)
.+.+++++++|+||||+||+||+||++.|||+++.+||+||+++|++.|||++|+|||+||+|++|||||+|+++++|+|
T Consensus 8 ~~~~~~~~~~~~iYplsnY~f~~k~~~~ekd~s~~~r~~rl~~~y~~~g~R~sV~avil~~~~~~phVLLlq~~~~~f~L 87 (208)
T 3bho_A 8 QTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKL 87 (208)
T ss_dssp CCCCTTTCCEEEECBGGGEEEEEECCCCCSCSSHHHHHHHHHHHHHHHCSEEEEEEEEEEEETTEEEEEEEEEETTEEEC
T ss_pred CCCCccccceEEEecccceeEccCCccccccccHHHHHHHHHHHHHhhCCceEEEEEEEEcCCCCcEEEEEEcCCCcEEC
Confidence 35568889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEecCCCCCCCCCCCCCCCCCccceeEEEeeeCCCC----
Q psy16776 104 PGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER---- 179 (214)
Q Consensus 104 PGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwRp~Fe~~~yPYlP~Hit~PKE~~klf~V~Lpe~---- 179 (214)
|||++++||++++||+|||.||||.+++...+|+||||||+||||+||++||||+||||||||||+|||+|+|||+
T Consensus 88 PGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~ 167 (208)
T 3bho_A 88 PGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFA 167 (208)
T ss_dssp SEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEE
T ss_pred CCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccceEe
Confidence 9999999999999999999999998778889999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEeecccccccCCCCccceeecccccccC
Q psy16776 180 VPKNYKLVAAPLVELYDNSQGYGPIISSLPQALCR 214 (214)
Q Consensus 180 vp~n~kL~AvPLfely~N~~~yG~~is~iP~llSr 214 (214)
|||||||+||||||||||+++||++||||||+|||
T Consensus 168 vPkn~kL~AvPLfely~N~~~yG~~issiP~llSR 202 (208)
T 3bho_A 168 VPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSR 202 (208)
T ss_dssp EETTCEEEEEEHHHHTTCHHHHHHHHTTHHHHHTT
T ss_pred cCCCCeEEeecHHhhhcchhhhchhhhhhhhhhhh
Confidence 99999999999999999999999999999999998
No 2
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.32 E-value=4.9e-12 Score=98.33 Aligned_cols=64 Identities=23% Similarity=0.416 Sum_probs=51.8
Q ss_pred ceeEEE-EEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 73 MRRSVD-GVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 73 mRrsV~-aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
||+.+. |+|+.+++ +|||+|+.+|.|.||||++++||+..+|++||+.||+|. +.++.++++..
T Consensus 1 M~~~~aag~vv~~~~---~vLL~~r~~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl------~~~~~~~l~~~ 65 (134)
T 3i7u_A 1 MKKEFSAGGVLFKDG---EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGV------KGEILDYIGEI 65 (134)
T ss_dssp CEEEEEEEEEEEETT---EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSE------EEEEEEEEEEE
T ss_pred CccEEEEEEEEEECC---EEEEEEeCCCcEECCeeEecCCCCHHHHHHHHHHHhcCc------eEEEeeeeeee
Confidence 544333 33344554 899999999999999999999999999999999999995 66777788764
No 3
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.17 E-value=1.1e-10 Score=87.80 Aligned_cols=50 Identities=24% Similarity=0.388 Sum_probs=44.6
Q ss_pred EEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 90 HVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 90 hVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
+|||+|+..+.|.||||.+++||+..+|+.||+.||+|. +....+.++..
T Consensus 16 ~vLl~~r~~~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl------~~~~~~~~~~~ 65 (134)
T 2pbt_A 16 EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGV------KGEILDYIGEI 65 (134)
T ss_dssp EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSE------EEEEEEEEEEE
T ss_pred EEEEEEeCCCcEECCccccCCCCCHHHHHHHHHHHHHCC------ccEEeeeeeEE
Confidence 999999988999999999999999999999999999995 45555677664
No 4
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.16 E-value=1.2e-10 Score=91.15 Aligned_cols=79 Identities=18% Similarity=0.337 Sum_probs=58.8
Q ss_pred HHHHHhHHHHhhcCceeEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEE
Q psy16776 59 ARFQRMRDEFEKIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIV 138 (214)
Q Consensus 59 ~Rl~rl~~~y~~~GmRrsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eV 138 (214)
+.+..++.........+.+.+++++.+. -+|||.|+..+.|.||||.+++||+..+|++||+.||+|. +...
T Consensus 5 ~~~~~~r~~~~~~~~~~~~v~~ii~~~~--~~vLL~~r~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~ 76 (153)
T 3eds_A 5 LYYKKIREQLGHELIFXPSVAAVIKNEQ--GEILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGL------KVQV 76 (153)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEEEBCTT--CCEEEECC---CBBCSEEECCTTSCHHHHHHHHHHHHHCE------EEEE
T ss_pred hHHHHHHHhcCCCcEEeeeEEEEEEcCC--CeEEEEEcCCCcEECCccccCCCCCHHHHHHHHHHHHHCc------ccee
Confidence 3445566666767775555566665433 4799988888899999999999999999999999999995 5666
Q ss_pred eceEEEE
Q psy16776 139 EDTIGNW 145 (214)
Q Consensus 139 ge~lg~w 145 (214)
.+.++.+
T Consensus 77 ~~~~~~~ 83 (153)
T 3eds_A 77 KKQKGVF 83 (153)
T ss_dssp EEEEEEE
T ss_pred eeEEEEe
Confidence 6777765
No 5
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.14 E-value=1.4e-10 Score=86.44 Aligned_cols=64 Identities=23% Similarity=0.240 Sum_probs=53.7
Q ss_pred ceeEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 73 MRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 73 mRrsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
|..+|.+|++.+++ +|||.|+..|.|.||||.+++||+..+++.||+.||+|. +..+.+.++.+
T Consensus 1 m~~~~~~vi~~~~~---~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl------~~~~~~~~~~~ 64 (126)
T 1vcd_A 1 MELGAGGVVFNAKR---EVLLLRDRMGFWVFPKGHPEPGESLEEAAVREVWEETGV------RAEVLLPLYPT 64 (126)
T ss_dssp CEEEEEEEEECTTS---CEEEEECTTSCEECCEECCCTTCCHHHHHHHHHHHHHCC------EEEEEEEEEEE
T ss_pred CeeEEEEEEEcCCC---EEEEEEECCCCccCCcCcCCCCCCHHHHHHHHHHHhhCc------EeeeccEEeEE
Confidence 56677777763332 899999988999999999999999999999999999996 55666777775
No 6
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.10 E-value=3.1e-10 Score=86.88 Aligned_cols=62 Identities=21% Similarity=0.313 Sum_probs=48.6
Q ss_pred eEEEEEEEEecCCCCEEEEEEccC-------ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQLGT-------TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~~~-------~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
+.+.++++.+++ +|||+|+.. |.|.||||++++||+..+|+.||+.||+|. +....+.++.+
T Consensus 6 ~~~v~~vi~~~~---~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl------~~~~~~~~~~~ 74 (140)
T 3gwy_A 6 IEVVAAVIRLGE---KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDY------VIEVGEKLLTV 74 (140)
T ss_dssp EEEEEEEEEETT---EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCC------CEEEEEEEEEE
T ss_pred EEEEEEEEEeCC---EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCc------EEEeceEEEEE
Confidence 344444554443 899999853 579999999999999999999999999996 56677778775
No 7
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.10 E-value=3.5e-10 Score=90.94 Aligned_cols=64 Identities=19% Similarity=0.183 Sum_probs=47.5
Q ss_pred eEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEec
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWR 147 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwR 147 (214)
..+.++++.++. +|||+|+..|.|.||||++++||+..+|++||+.||+|. +....+.++.+..
T Consensus 16 ~~~~~~ii~~~~---~vLL~~r~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~l~~~~~ 79 (163)
T 3f13_A 16 ARRATAIIEMPD---GVLVTASRGGRYNLPGGKANRGELRSQALIREIREETGL------RINSMLYLFDHIT 79 (163)
T ss_dssp EEEEEEECEETT---EEEEEECC---BBCSEEECCTTCCHHHHHHHHHHHHHCC------CCCEEEEEEEEEC
T ss_pred eEEEEEEEEeCC---EEEEEEECCCeEECCceeCCCCCCHHHHHHHHHHHHHCc------ccceeEEEEEEec
Confidence 344444544444 799999999999999999999999999999999999996 3444556666543
No 8
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.09 E-value=5.5e-10 Score=88.19 Aligned_cols=73 Identities=23% Similarity=0.385 Sum_probs=54.5
Q ss_pred HHhhcCceeEEEEEEEEecCCCCEEEEEEcc--CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEE
Q psy16776 67 EFEKIGMRRSVDGVLLVHEHGLPHVLMLQLG--TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144 (214)
Q Consensus 67 ~y~~~GmRrsV~aVilvh~~~~phVLLLQ~~--~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ 144 (214)
.+...-++..|.+||+ ++ -+|||+|+. .+.|.||||++++||+..++++||+.||+|. +..+.+.++.
T Consensus 16 ~~~~~~~~~~v~~ii~-~~---~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~~~~ 85 (171)
T 3id9_A 16 LYIENIMQVRVTGILI-ED---EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGL------EVKIKKLLYV 85 (171)
T ss_dssp ------CEEEEEEEEE-ET---TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCC------CEEEEEEEEE
T ss_pred hccCCceEEEEEEEEE-EC---CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCC------ccccceEEEE
Confidence 3344445677766664 44 389999987 5799999999999999999999999999996 5667778877
Q ss_pred EecCC
Q psy16776 145 WWRPN 149 (214)
Q Consensus 145 wwRp~ 149 (214)
+..+.
T Consensus 86 ~~~~~ 90 (171)
T 3id9_A 86 CDKPD 90 (171)
T ss_dssp EEETT
T ss_pred EcccC
Confidence 65443
No 9
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.08 E-value=1.8e-10 Score=95.27 Aligned_cols=74 Identities=14% Similarity=0.254 Sum_probs=60.0
Q ss_pred HHhhcCceeEEEEEEEEecCCCCEEEEEEcc--CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEE
Q psy16776 67 EFEKIGMRRSVDGVLLVHEHGLPHVLMLQLG--TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144 (214)
Q Consensus 67 ~y~~~GmRrsV~aVilvh~~~~phVLLLQ~~--~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ 144 (214)
.|...|.+..|.+|++. ..+.-+|||+|+. .+.|.||||++++||+..+|++||+.||+|. +..+.++++.
T Consensus 33 ~~~~~~~~~~~~~vi~~-~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl------~~~~~~~l~~ 105 (194)
T 2fvv_A 33 TYDGDGYKKRAACLCFR-SESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGV------KGTLGRLVGI 105 (194)
T ss_dssp CBCTTSCEEEEEEEEES-STTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCE------EEEEEEEEEE
T ss_pred ccccCCccccEEEEEEE-ECCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCC------ccccceEEEE
Confidence 45566788888777763 2334699999975 4799999999999999999999999999996 5677788888
Q ss_pred Eec
Q psy16776 145 WWR 147 (214)
Q Consensus 145 wwR 147 (214)
+..
T Consensus 106 ~~~ 108 (194)
T 2fvv_A 106 FEN 108 (194)
T ss_dssp EEE
T ss_pred EEc
Confidence 763
No 10
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.06 E-value=6.7e-10 Score=83.99 Aligned_cols=68 Identities=21% Similarity=0.278 Sum_probs=51.3
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC--ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEe-ceEEE
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT--TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVE-DTIGN 144 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~--~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVg-e~lg~ 144 (214)
+++|.+|++..+.+..+|||+|+.. +.|.||||++++||+..+|++||+.||+|.. ..++.+. .+++.
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~---~~~~~~~~~~~~~ 73 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANIT---KEQLTIHEDCHET 73 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCC---GGGEEEEEEEEEE
T ss_pred eEEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCC---ccceEEeccccce
Confidence 4555556654444457999999864 4999999999999999999999999999963 1245544 55554
No 11
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.05 E-value=2.5e-10 Score=88.08 Aligned_cols=58 Identities=19% Similarity=0.169 Sum_probs=45.3
Q ss_pred Ccee--EEEEEEEEecCCCCEEEEEEccC-ceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 72 GMRR--SVDGVLLVHEHGLPHVLMLQLGT-TFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 72 GmRr--sV~aVilvh~~~~phVLLLQ~~~-~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
||++ +|.+|++...++..+|||+|+.. +.|.||||++++||+..+|++||+.||+|..
T Consensus 1 gm~~~~~v~vvi~~~~~~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~ 61 (149)
T 3son_A 1 GMRQPFQVLVIPFIKTEANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLD 61 (149)
T ss_dssp ---CCCEEEEEEEEECSSSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCC
T ss_pred CCCCceEEEEEEEEecCCCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCC
Confidence 6744 44444444445567999999875 8999999999999999999999999999974
No 12
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.05 E-value=6.1e-10 Score=87.46 Aligned_cols=59 Identities=25% Similarity=0.427 Sum_probs=44.9
Q ss_pred HhhcCceeEEEEEEEEecCCCCEEEEEEccC------ceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 68 FEKIGMRRSVDGVLLVHEHGLPHVLMLQLGT------TFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 68 y~~~GmRrsV~aVilvh~~~~phVLLLQ~~~------~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
+...+|++.+.+++++.+. -+|||+|+.. +.|.||||.+++||+..+|+.||+.||+|.
T Consensus 20 ~~~~~~~~~~~~~~ii~~~--~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl 84 (165)
T 3oga_A 20 FQSNAMRQRTIVCPLIQND--GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGE 84 (165)
T ss_dssp ----CCEEEEEEEEEEEET--TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCS
T ss_pred ccCCCcceEEEEEEEEeCC--CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 4555775555555554443 3899999863 689999999999999999999999999996
No 13
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.03 E-value=3.2e-10 Score=88.77 Aligned_cols=53 Identities=23% Similarity=0.433 Sum_probs=45.3
Q ss_pred EEEEEEEe-------cCCCCEEEEEEccC--ceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 77 VDGVLLVH-------EHGLPHVLMLQLGT--TFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 77 V~aVilvh-------~~~~phVLLLQ~~~--~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
++|+|+-. +++...|||+|+.. +.|.||||++++||+..+|++||+.||+|..
T Consensus 5 a~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~ 66 (155)
T 3u53_A 5 ACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIE 66 (155)
T ss_dssp EEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCC
T ss_pred EeEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCc
Confidence 34666654 46788999999875 5899999999999999999999999999963
No 14
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.03 E-value=4.6e-10 Score=85.65 Aligned_cols=107 Identities=16% Similarity=0.136 Sum_probs=70.1
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEecCCCCCC
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRPNFEPP 153 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwRp~Fe~~ 153 (214)
|.+|.+||+.. +.-+|||.|+..+.|.||||.+++||+..+++.||+.||+|. +..+.+.++.+-. .
T Consensus 18 ~~~~~~vi~~~--~~~~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl------~~~~~~~~~~~~~-----~ 84 (148)
T 2azw_A 18 RYAAYIIVSKP--ENNTMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGI------SVEIGCYLGEADE-----Y 84 (148)
T ss_dssp CCEEEEECEEG--GGTEEEEEECTTSCEECSEEECCTTCCHHHHHHHHHHHHHSE------EEEEEEEEEEEEE-----E
T ss_pred eeEEEEEEECC--CCCeEEEEEcCCCCEeCCCcccCCCCCHHHHHHHHHHHHhCC------eeEeeeEEEEEEE-----E
Confidence 55666666532 234899999988999999999999999999999999999995 5666677766310 0
Q ss_pred CCCCCCCCC-CCccceeEEEeeeCCCC--C--CCCceEEeeccccccc
Q psy16776 154 QYPYVPVHI-TSPKEHRRLFLVQLPER--V--PKNYKLVAAPLVELYD 196 (214)
Q Consensus 154 ~yPYlP~Hi-t~PKE~~klf~V~Lpe~--v--p~n~kL~AvPLfely~ 196 (214)
+.++|. +.-.+...+|.+..... . ...-.+.-+|+=|+.+
T Consensus 85 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 129 (148)
T 2azw_A 85 ---FYSNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVR 129 (148)
T ss_dssp ---EEETTTTEEEEEEEEEEEEEEEEECSSCC-CCSEEEEECHHHHHH
T ss_pred ---EcCCCCCcceEEEEEEEEEEcCcCCcCCCCceeeEEEeeHHHHHh
Confidence 011222 22345566777766433 1 1123555666666543
No 15
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.03 E-value=5.7e-10 Score=86.65 Aligned_cols=66 Identities=24% Similarity=0.289 Sum_probs=53.3
Q ss_pred CceeEEEEEEEEecCCCCEEEEEEccC----ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEe
Q psy16776 72 GMRRSVDGVLLVHEHGLPHVLMLQLGT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWW 146 (214)
Q Consensus 72 GmRrsV~aVilvh~~~~phVLLLQ~~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ww 146 (214)
.+.+.|.++++.. .-+|||+|+.. +.|.||||.+++||+..+|++||+.||+|. +..+.+.++.+.
T Consensus 18 ~~~~~v~~~i~~~---~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl------~~~~~~~~~~~~ 87 (156)
T 3gg6_A 18 NVCYVVLAVFLSE---QDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGL------HCEPETLLSVEE 87 (156)
T ss_dssp TCEEEEEEECBCT---TSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCE------EEEEEEEEEEEE
T ss_pred ceEEEEEEEEEeC---CCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCc------eeEeeeEEEEEc
Confidence 4556666665422 24999999874 799999999999999999999999999995 667778888764
No 16
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.03 E-value=3.6e-10 Score=88.43 Aligned_cols=61 Identities=20% Similarity=0.171 Sum_probs=48.5
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC-ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEE
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT-TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIG 143 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~-~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg 143 (214)
|+.+.++++.++. +|||+|+.. +.|.||||++++||+..+|++||+.||+|. +..+.+.++
T Consensus 5 ~~~~v~~vi~~~~---~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~~~ 66 (159)
T 3f6a_A 5 RHFTVSVFIVCKD---KVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGL------NVTLYNPID 66 (159)
T ss_dssp SCEEEEEEEEETT---EEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCC------CCEECCCCC
T ss_pred ceEEEEEEEEECC---EEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCC------Cceeccccc
Confidence 4455555555543 999999875 799999999999999999999999999996 445555554
No 17
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.02 E-value=3.7e-10 Score=91.32 Aligned_cols=69 Identities=19% Similarity=0.248 Sum_probs=55.6
Q ss_pred eeEEEEEEEEecCC----CCEEEEEEcc-----------CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEE
Q psy16776 74 RRSVDGVLLVHEHG----LPHVLMLQLG-----------TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIV 138 (214)
Q Consensus 74 RrsV~aVilvh~~~----~phVLLLQ~~-----------~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eV 138 (214)
+.+|.+||+..+.+ ..+|||+|+. .+.|.||||.+++||+..+|++||+.||+|. +..+
T Consensus 27 ~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl------~~~~ 100 (187)
T 3i9x_A 27 GYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSL------TDIP 100 (187)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCC------CSCC
T ss_pred cceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCC------CCcc
Confidence 37888888876655 5699999992 4799999999999999999999999999997 3344
Q ss_pred eceEEEEecC
Q psy16776 139 EDTIGNWWRP 148 (214)
Q Consensus 139 ge~lg~wwRp 148 (214)
.+.++.+..+
T Consensus 101 ~~~l~~~~~~ 110 (187)
T 3i9x_A 101 LIPFGVFDKP 110 (187)
T ss_dssp CEEEEEECCT
T ss_pred eEEEEEEcCC
Confidence 5677776443
No 18
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.00 E-value=1.7e-09 Score=82.38 Aligned_cols=69 Identities=17% Similarity=0.252 Sum_probs=52.3
Q ss_pred ceeEEEEEEEEecCC-CCEEEEEEccC--ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEec
Q psy16776 73 MRRSVDGVLLVHEHG-LPHVLMLQLGT--TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWR 147 (214)
Q Consensus 73 mRrsV~aVilvh~~~-~phVLLLQ~~~--~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwR 147 (214)
.+.+|.+||+..+.+ ..+|||+|+.. +.|.||||++++||+..+|++||+.||+|. +..+.++++.+-.
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl------~~~~~~~~~~~~~ 79 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGL------EVRLHKLMGVYSD 79 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCC------CCEEEEEEEEECC
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCC------CcccceEEEEECC
Confidence 366777777653222 22299999864 359999999999999999999999999996 4566777776643
No 19
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=98.99 E-value=2.3e-09 Score=87.10 Aligned_cols=65 Identities=17% Similarity=0.234 Sum_probs=49.7
Q ss_pred eeEEEEEEEEecCCCCEEEEEEcc----CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEecC
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLG----TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRP 148 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~----~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwRp 148 (214)
+.+|.+|+ .+++ +|||+|+. .+.|.||||.+++||+..++++||+.||+|. +..+.++++.+..+
T Consensus 40 ~~~v~~ii-~~~~---~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~~~~~~~~ 108 (189)
T 3cng_A 40 KVIVGCIP-EWEN---KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANA------RVEIRELYAVYSLP 108 (189)
T ss_dssp EEEEEEEE-EETT---EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC------CEEEEEEEEEEEEG
T ss_pred ceEEEEEE-EeCC---EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCC------ccccceeEEEEecC
Confidence 34444444 4433 89999986 4789999999999999999999999999996 45566666665333
No 20
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=98.98 E-value=7.4e-10 Score=85.96 Aligned_cols=63 Identities=27% Similarity=0.362 Sum_probs=48.2
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC------ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT------TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~------~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
+.+|.+||+ .. .-+|||+|+.. +.|.||||.+++||+..+|++||+.||+|.. ..+.++++.+
T Consensus 8 ~~~v~~vi~-~~--~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~------~~~~~~~~~~ 76 (153)
T 3grn_A 8 IISVYALIR-NE--KGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGIT------MVPGDIAGQV 76 (153)
T ss_dssp EEEEEEEEE-CT--TCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCC------CCCCSEEEEE
T ss_pred EEEEEEEEE-cC--CCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcE------eecceEEEEE
Confidence 555555554 22 23899999874 7899999999999999999999999999963 3344556554
No 21
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=98.98 E-value=2.4e-09 Score=87.67 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=50.2
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC---ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEE
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT---TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~---~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ 144 (214)
+.+|.++++.. ...+|||+|+.. +.|.||||++++||+..+|++||+.||+|. +..+.+.++.
T Consensus 26 ~v~v~~~v~~~--~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl------~~~~~~l~~~ 91 (199)
T 3h95_A 26 QVGVAGAVFDE--STRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGI------KSEFRSVLSI 91 (199)
T ss_dssp CCEEEEEEEET--TTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCC------CEEEEEEEEE
T ss_pred cceEEEEEEeC--CCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCC------ccccceEEEE
Confidence 45666666532 234999999875 799999999999999999999999999996 4556666664
No 22
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=98.97 E-value=1.3e-09 Score=84.49 Aligned_cols=62 Identities=11% Similarity=0.133 Sum_probs=50.5
Q ss_pred ceeEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 73 MRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 73 mRrsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
++.+|.|||+ ++ -+|||.|+ .+.|.||||.+++||+..+|++||+.||+|. +..+.+.++.+
T Consensus 18 ~~~~~~~ii~-~~---~~vLl~~r-~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl------~~~~~~~~~~~ 79 (154)
T 2pqv_A 18 FGVRATALIV-QN---HKLLVTKD-KGKYYTIGGAIQVNESTEDAVVREVKEELGV------KAQAGQLAFVV 79 (154)
T ss_dssp EEEEEEECCE-ET---TEEEEEEE-TTEEECEEEECBTTCCHHHHHHHHHHHHHCC------CEEEEEEEEEE
T ss_pred EeEEEEEEEE-EC---CEEEEEec-CCeEECcccCcCCCCCHHHHHHHHHHHHhCC------eeeeceEEEEE
Confidence 4666766665 33 38999999 8899999999999999999999999999996 45556666553
No 23
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=98.97 E-value=1.1e-09 Score=84.57 Aligned_cols=50 Identities=20% Similarity=0.256 Sum_probs=41.6
Q ss_pred EEEEEEcc---CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 90 HVLMLQLG---TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 90 hVLLLQ~~---~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
+|||+|+. .+.|.||||++++||+..+|++||+.||+|.. ..+.+.++..
T Consensus 17 ~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~------~~~~~~~~~~ 69 (153)
T 3shd_A 17 KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGIS------AQPQHFIRMH 69 (153)
T ss_dssp EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCC------CCCCEEEEEE
T ss_pred EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcc------cccCcEEEEE
Confidence 99999973 46899999999999999999999999999973 3344556554
No 24
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=98.96 E-value=1.3e-09 Score=92.13 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=57.4
Q ss_pred ceeEEEEEEEEecCCCCEEEEEEccC----ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEecC
Q psy16776 73 MRRSVDGVLLVHEHGLPHVLMLQLGT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRP 148 (214)
Q Consensus 73 mRrsV~aVilvh~~~~phVLLLQ~~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwRp 148 (214)
.+.+|.+||+.-+++..+|||+|+.. |.|.||||.+++||+..+|+.||+.||+|.. ....+.++++..+
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~------~~~~~~l~~~~~~ 85 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLE------NVYMEQVGAFGAI 85 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCC------SCEEEEEEEECCT
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCC------CCceEEEEEeCCC
Confidence 37788888887666678999999974 7899999999999999999999999999963 3345667776433
No 25
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=98.95 E-value=1.5e-09 Score=92.61 Aligned_cols=72 Identities=19% Similarity=0.207 Sum_probs=59.7
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC----ceeeeCCccccC--CCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEec
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT----TFFKLPGGELNQ--GEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWR 147 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~----~~f~LPGGrle~--GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwR 147 (214)
..+|.+||+.-+++..+|||+|+.. |.|.||||.+++ ||+..+|++|||.||+|. +....+.++++..
T Consensus 22 ~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl------~~~~~~~l~~~~~ 95 (240)
T 3gz5_A 22 LLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAV------VPPYIEQLCTVGN 95 (240)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSS------CCSEEEEEEEEEE
T ss_pred ccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCC------CCCceeeEEEeCC
Confidence 5788888887667778999999874 789999999999 999999999999999997 3345667788765
Q ss_pred CCCC
Q psy16776 148 PNFE 151 (214)
Q Consensus 148 p~Fe 151 (214)
+..+
T Consensus 96 ~~r~ 99 (240)
T 3gz5_A 96 NSRD 99 (240)
T ss_dssp SSSS
T ss_pred CccC
Confidence 5543
No 26
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=98.94 E-value=2.1e-09 Score=83.13 Aligned_cols=64 Identities=19% Similarity=0.351 Sum_probs=49.5
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC--------ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT--------TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~--------~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
+++|.+ ++++.+ -+|||+|+.. +.|.||||.+++||+..+++.||+.||+|. +....++++.+
T Consensus 13 ~~~~~~-vi~~~~--~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl------~~~~~~~l~~~ 83 (159)
T 1sjy_A 13 LRAAGV-VLLNER--GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGL------RVRPVKFLGAY 83 (159)
T ss_dssp EEEEEE-EEBCTT--CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSC------CEEEEEEEEEE
T ss_pred EEeEEE-EEEeCC--CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCc------cceeeEEEEEE
Confidence 444444 444322 3799999873 799999999999999999999999999996 45566777776
Q ss_pred e
Q psy16776 146 W 146 (214)
Q Consensus 146 w 146 (214)
.
T Consensus 84 ~ 84 (159)
T 1sjy_A 84 L 84 (159)
T ss_dssp E
T ss_pred e
Confidence 4
No 27
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=98.94 E-value=2e-09 Score=82.69 Aligned_cols=50 Identities=22% Similarity=0.362 Sum_probs=43.7
Q ss_pred EEEEEEccC----ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 90 HVLMLQLGT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 90 hVLLLQ~~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
+|||+|+.. +.|.||||++++||+..+|++||+.||+|. +..+.+.++.+
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl------~~~~~~~~~~~ 73 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGH------SFLPEVLTGIY 73 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSE------EEEEEEEEEEE
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCc------EeccceEEEEE
Confidence 899999863 379999999999999999999999999995 56677777775
No 28
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=98.94 E-value=7.3e-10 Score=89.73 Aligned_cols=59 Identities=24% Similarity=0.291 Sum_probs=48.9
Q ss_pred hcCceeEEEEEEEEecCCCCEEEEEEcc------CceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLG------TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 70 ~~GmRrsV~aVilvh~~~~phVLLLQ~~------~~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
+.|.|.+|.+|++ ..++.++|||+|+. .+.|.||||++++||+..++++||+.||+|..
T Consensus 30 ~~~~~~~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~ 94 (194)
T 1nqz_A 30 LPHYRRAAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALD 94 (194)
T ss_dssp ---CEEEEEEEEE-ESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred CCCCceEEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCC
Confidence 4577888887777 56666799999985 37899999999999999999999999999963
No 29
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=98.94 E-value=7e-10 Score=82.56 Aligned_cols=51 Identities=18% Similarity=0.417 Sum_probs=41.8
Q ss_pred eEEEEEEEEecCCCCEEEEEEccC-----ceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQLGT-----TFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~~~-----~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
+.+.++|+.++ -+|||.|+.. |.|.||||++++||+..+++.||+.||+|.
T Consensus 5 ~~~~~ii~~~~---~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~ 60 (129)
T 1mut_A 5 QIAVGIIRNEN---NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGI 60 (129)
T ss_dssp ECCCEECEETT---TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCC
T ss_pred EEEEEEEEecC---CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCC
Confidence 34445554333 3899999863 799999999999999999999999999996
No 30
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=98.94 E-value=3.2e-09 Score=81.14 Aligned_cols=62 Identities=27% Similarity=0.324 Sum_probs=48.7
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC-----ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEE
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT-----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~-----~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ 144 (214)
.+.|.++++.+++ +|||+|+.. |.|.||||.+++||+..+|+.||+.||+|. +....+.++.
T Consensus 21 ~~~~~~~i~~~~~---~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl------~~~~~~~~~~ 87 (153)
T 3ees_A 21 WIPVVAGFLRKDG---KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGI------EAEVGELKLA 87 (153)
T ss_dssp EEEEEEEEEEETT---EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSC------EEECCCEEEE
T ss_pred eEEEEEEEEEECC---EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCC------ccccCceEEE
Confidence 3455556655543 999999874 699999999999999999999999999996 4444455554
No 31
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=98.94 E-value=2.6e-09 Score=83.90 Aligned_cols=62 Identities=16% Similarity=0.265 Sum_probs=48.8
Q ss_pred eeEEEEEEEEecCCCCEEEEEEcc----CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLG----TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~----~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
|.+|.+||+ ++ .+|||+|+. .+.|.||||.+++||+..+|++||+.||+|. +..+.+.++.+
T Consensus 29 ~~~v~~vi~-~~---~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~~~~~ 94 (157)
T 4dyw_A 29 RVGCGAAIV-RD---GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGI------ALERATLLCVV 94 (157)
T ss_dssp EEEEEEEEE-ET---TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSC------EEESCEEEEEE
T ss_pred eeEEEEEEE-EC---CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCc------ccccCcEEEEE
Confidence 455555554 43 389999986 4789999999999999999999999999996 44455666664
No 32
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=98.92 E-value=3e-09 Score=80.93 Aligned_cols=40 Identities=35% Similarity=0.590 Sum_probs=37.0
Q ss_pred EEEEEEccC-----ceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 90 HVLMLQLGT-----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 90 hVLLLQ~~~-----~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
+|||.|+.. |.|.||||++++||+..+++.||+.||+|..
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~ 65 (144)
T 3r03_A 21 RVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVD 65 (144)
T ss_dssp CEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCB
T ss_pred EEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCce
Confidence 799999874 6899999999999999999999999999963
No 33
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=98.92 E-value=3.1e-09 Score=80.26 Aligned_cols=62 Identities=21% Similarity=0.373 Sum_probs=47.5
Q ss_pred eEEEEEEEEecCCCCEEEEEEccC-----ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQLGT-----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~~~-----~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
+.+.++|+.+++ +|||.|+.. +.|.||||.+++||+..+++.||+.||+|. +..+.++++..
T Consensus 9 ~~~~~~ii~~~~---~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl------~~~~~~~~~~~ 75 (140)
T 2rrk_A 9 IEVVAAIIERDG---KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGI------EATVGEYVASH 75 (140)
T ss_dssp EEEEEEEEEETT---EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCE------EEECCEEEEEE
T ss_pred ceEEEEEEEcCC---EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCC------eeecccEEEEE
Confidence 334444444444 899999853 799999999999999999999999999995 34445566654
No 34
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=98.91 E-value=3.3e-09 Score=82.63 Aligned_cols=53 Identities=32% Similarity=0.478 Sum_probs=42.2
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC-----ceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT-----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~-----~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
.+.+.++++ ... -+|||.|+.. |.|.||||++++||+..+|+.||+.||+|..
T Consensus 29 ~~~~~~~i~-~~~--~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~ 86 (158)
T 3hhj_A 29 LIVVACALL-DQD--NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVH 86 (158)
T ss_dssp EEEEEEEEB-CTT--SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCB
T ss_pred EEEEEEEEE-eCC--CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcE
Confidence 344444443 222 3899999874 5899999999999999999999999999963
No 35
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=98.90 E-value=1.4e-09 Score=85.18 Aligned_cols=59 Identities=24% Similarity=0.332 Sum_probs=46.9
Q ss_pred eEEEEEEEEecCCCCEEEEEEccC-ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEE
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQLGT-TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIG 143 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~~~-~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg 143 (214)
.+|.|||+ +++ +|||+|+.. |.|.||||++++||+..+++.||+.||+|. +..+.+.++
T Consensus 2 ~~~~~vi~-~~~---~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~~~ 61 (156)
T 1k2e_A 2 IVTSGVLV-ENG---KVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGI------VVEPIGFTY 61 (156)
T ss_dssp EEEEEECE-ETT---EEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSE------EEEECCCCC
T ss_pred eEEEEEEE-ECC---EEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCC------cceecccee
Confidence 45555554 433 899999864 799999999999999999999999999995 455555554
No 36
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=98.90 E-value=2.3e-09 Score=86.40 Aligned_cols=63 Identities=22% Similarity=0.260 Sum_probs=47.8
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccC----ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
++.+.++++.+++ +|||+|+.. +.|.||||.+++||+..+|++||+.||+|. +..+.+.++.+
T Consensus 24 ~~~~~~~vi~~~~---~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~l~~~ 90 (176)
T 3q93_A 24 SRLYTLVLVLQPQ---RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGL------TVDALHKVGQI 90 (176)
T ss_dssp EEEEEEEEEECSS---EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSC------EESCCEEEEEE
T ss_pred CcEEEEEEEEeCC---EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCC------cceeeEEEEEE
Confidence 4555555554443 999998753 799999999999999999999999999996 23344455554
No 37
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=98.89 E-value=1.2e-09 Score=84.78 Aligned_cols=52 Identities=21% Similarity=0.295 Sum_probs=40.6
Q ss_pred eEEEEEEEEecCCCCEEEEEEc-cC----ceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQL-GT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~-~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
..+.+|+++.+++ +|||++. .. +.|.||||++++||+..+|++||+.||+|.
T Consensus 5 ~~~v~vi~~~~~~--~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl 61 (145)
T 2w4e_A 5 PRAVFILPVTAQG--EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGG 61 (145)
T ss_dssp CEEEEEEEEETTS--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCE
T ss_pred CCEEEEEEEcCCC--EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCC
Confidence 3455555555444 6877753 22 389999999999999999999999999995
No 38
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=98.89 E-value=4.2e-09 Score=87.07 Aligned_cols=64 Identities=16% Similarity=0.205 Sum_probs=51.3
Q ss_pred eeEEEEEEEEecCCCCEEEEEEcc-CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEec
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLG-TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWR 147 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~-~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwR 147 (214)
+.+|.|||+ +++ +|||+|+. .|.|.||||++++||+..+|++||+.||+|. +..+.+.++.+..
T Consensus 68 ~~~v~~vv~-~~~---~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~v~~~~~l~~~~~ 132 (205)
T 3q1p_A 68 KVDIRAVVF-QNE---KLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGY------EVDHFKLLAIFDK 132 (205)
T ss_dssp EEEEEEEEE-ETT---EEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSE------EEEEEEEEEEEEH
T ss_pred cceEEEEEE-ECC---EEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCC------ccccceEEEEEec
Confidence 455666655 433 99999987 6899999999999999999999999999995 6667788887643
No 39
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=98.87 E-value=6e-09 Score=86.21 Aligned_cols=63 Identities=13% Similarity=0.266 Sum_probs=53.1
Q ss_pred eeEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEe
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWW 146 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ww 146 (214)
+.+|.+||+ ++ -+|||+|+..+.|.||||.+++||+..+|+.||+.||+|. +....+.++.+.
T Consensus 70 ~~~v~~vv~-~~---~~vLLvrr~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~l~~~~ 132 (206)
T 3o8s_A 70 KLDTRAAIF-QE---DKILLVQENDGLWSLPGGWCDVDQSVKDNVVKEVKEEAGL------DVEAQRVVAILD 132 (206)
T ss_dssp EEEEEEEEE-ET---TEEEEEECTTSCEECSEEECCTTSCHHHHHHHHHHHHHCE------EEEEEEEEEEEE
T ss_pred CccEEEEEE-EC---CEEEEEEecCCeEECCeeccCCCCCHHHHHHHHHHHHHCC------cceeeeEEEEEe
Confidence 556666665 44 3999999988899999999999999999999999999995 567777888764
No 40
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=98.86 E-value=3.8e-09 Score=86.28 Aligned_cols=52 Identities=29% Similarity=0.533 Sum_probs=43.1
Q ss_pred ceeEEEEEEEEecCCCCEEEEEEcc-CceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 73 MRRSVDGVLLVHEHGLPHVLMLQLG-TTFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 73 mRrsV~aVilvh~~~~phVLLLQ~~-~~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
|.+.|.+|| .+++ +|||+|+. .|.|.||||++++||+..+|++||+.||+|.
T Consensus 3 ~~~v~~~vi-~~~~---~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl 55 (188)
T 3fk9_A 3 LQRVTNCIV-VDHD---QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGI 55 (188)
T ss_dssp CCEEEEEEE-EETT---EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSC
T ss_pred ceEEEEEEE-EECC---EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCC
Confidence 445554444 4443 89999985 4799999999999999999999999999996
No 41
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=98.86 E-value=3.6e-09 Score=80.39 Aligned_cols=52 Identities=23% Similarity=0.324 Sum_probs=42.8
Q ss_pred eEEEEEEEEecCCCCEEEEEEccC--ceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQLGT--TFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~~~--~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
.+|.++|+..+ .-+|||+|+.. |.|.||||++++||+..++++||+.||+|.
T Consensus 10 ~~v~~~i~~~~--~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 63 (150)
T 2o1c_A 10 VSILVVIYAQD--TKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTI 63 (150)
T ss_dssp EEEEEEEEETT--TCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred eEEEEEEEeCC--CCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 45555555322 23899999874 799999999999999999999999999996
No 42
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=98.86 E-value=2.7e-09 Score=82.53 Aligned_cols=54 Identities=24% Similarity=0.417 Sum_probs=45.6
Q ss_pred CceeEEEEEEEEecCCCCEEEEEEccC--ceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 72 GMRRSVDGVLLVHEHGLPHVLMLQLGT--TFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 72 GmRrsV~aVilvh~~~~phVLLLQ~~~--~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
+.|.+|.++++.++ -+|||+|+.. +.|.||||.+++||+..+|++||+.||+|.
T Consensus 12 ~~~~~v~~~i~~~~---~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 67 (165)
T 1f3y_A 12 GYRRNVGICLMNND---KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGV 67 (165)
T ss_dssp SCCCEEEEEEECTT---SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred ceeeeEEEEEECCC---CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCC
Confidence 34777777666322 3899999874 799999999999999999999999999996
No 43
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=98.85 E-value=8.5e-09 Score=81.95 Aligned_cols=58 Identities=17% Similarity=0.300 Sum_probs=46.5
Q ss_pred hcCceeEEEEEEEEecCCCCEEEEEEccC------ceeee-CCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGT------TFFKL-PGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 70 ~~GmRrsV~aVilvh~~~~phVLLLQ~~~------~~f~L-PGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
+.|+++.+.+|++....+ +|||.++.. |.|.| |||++++||+..++++||+.||+|..
T Consensus 32 ~~~~~~~~~~v~i~~~~~--~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~ 96 (180)
T 2fkb_A 32 AQCLRHRATYIVVHDGMG--KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIA 96 (180)
T ss_dssp HHTCCEEEEEEEEECSSS--CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCB
T ss_pred ccCceeeEEEEEEECCCC--EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCC
Confidence 447766666777664443 688888753 56999 99999999999999999999999973
No 44
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=98.84 E-value=5e-09 Score=81.04 Aligned_cols=55 Identities=22% Similarity=0.279 Sum_probs=45.7
Q ss_pred CceeEEEEEEEEecCCCCEEEEEEccC----ceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 72 GMRRSVDGVLLVHEHGLPHVLMLQLGT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 72 GmRrsV~aVilvh~~~~phVLLLQ~~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
..+.+|.+||+- ..-+|||.|+.. +.|.||||.+++||+..++++||+.||+|..
T Consensus 16 ~~~~~v~~vi~~---~~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~ 74 (160)
T 1rya_A 16 TPLVSLDFIVEN---SRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLR 74 (160)
T ss_dssp SCEEEEEEEEEC---TTSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSC
T ss_pred CcEEEEEEEEEc---CCCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 356777777762 224899999875 7899999999999999999999999999973
No 45
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=98.83 E-value=4.1e-09 Score=83.99 Aligned_cols=54 Identities=24% Similarity=0.354 Sum_probs=44.8
Q ss_pred CceeEEEEEEEEecCCCCEEEEEEccC-ceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 72 GMRRSVDGVLLVHEHGLPHVLMLQLGT-TFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 72 GmRrsV~aVilvh~~~~phVLLLQ~~~-~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
+.|.+|.+|++-++ -+|||+|+.. +.|.||||.+++||+..+++.||+.||+|.
T Consensus 6 ~~~~~v~~~i~~~~---~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~ 60 (164)
T 2kdv_A 6 GYRPNVGIVICNRQ---GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL 60 (164)
T ss_dssp SEEEEEEEEEECTT---SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCCcEEEEEEEccC---CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCC
Confidence 45676666665332 3899998864 799999999999999999999999999996
No 46
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=98.82 E-value=1.9e-09 Score=86.21 Aligned_cols=50 Identities=26% Similarity=0.470 Sum_probs=40.6
Q ss_pred EEEEEEEecCCCCEEEEEEcc-----CceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 77 VDGVLLVHEHGLPHVLMLQLG-----TTFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 77 V~aVilvh~~~~phVLLLQ~~-----~~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
+.+|+++..++ +|||+|+. .+.|.||||.+++||+..+|++||+.||+|.
T Consensus 43 ~v~v~i~~~~~--~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl 97 (182)
T 2yvp_A 43 ASFVLPVTERG--TALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGA 97 (182)
T ss_dssp EEEEEEBCTTS--EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCE
T ss_pred EEEEEEEcCCC--EEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCC
Confidence 44444443333 79999875 3689999999999999999999999999996
No 47
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=98.80 E-value=1.6e-08 Score=80.24 Aligned_cols=61 Identities=20% Similarity=0.312 Sum_probs=47.5
Q ss_pred EEEEEEEEecCCCCEEEEEEcc-----CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEe
Q psy16776 76 SVDGVLLVHEHGLPHVLMLQLG-----TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWW 146 (214)
Q Consensus 76 sV~aVilvh~~~~phVLLLQ~~-----~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ww 146 (214)
.+.+|+++++ -+|||+|+. .+.|.||||.+++||+..+|+.||+.||+|. ....+.++.++
T Consensus 35 ~~v~vii~~~---~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~l~~~~ 100 (170)
T 1v8y_A 35 PAVAVIALRE---GRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-------SGDLTYLFSYF 100 (170)
T ss_dssp CEEEEEEEET---TEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEE
T ss_pred CeEEEEEEEC---CEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-------CcCceeeEEEe
Confidence 3555565553 389999863 3589999999999999999999999999993 34456777764
No 48
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=98.80 E-value=1.5e-08 Score=88.08 Aligned_cols=56 Identities=29% Similarity=0.354 Sum_probs=49.3
Q ss_pred ceeEEEEEEEEecCC--CCEEEEEEccC----ceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 73 MRRSVDGVLLVHEHG--LPHVLMLQLGT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 73 mRrsV~aVilvh~~~--~phVLLLQ~~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
.+.+|.+||+..+.+ ..+|||+|+.. |.|.||||.+++||+..+|+.|||.||+|.
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl 99 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGV 99 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCC
Confidence 367888888876555 67999999874 789999999999999999999999999995
No 49
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=98.78 E-value=7.9e-09 Score=83.50 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=44.0
Q ss_pred hcCceeEEEEEEEEecCCCCEEEEEEcc------Cceeee-CCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLG------TTFFKL-PGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 70 ~~GmRrsV~aVilvh~~~~phVLLLQ~~------~~~f~L-PGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
..|+++.+.+++++.+.+ +|||.|+. .|.|.| |||.+++||+..+|++||+.||+|..
T Consensus 27 ~~~~~~~~v~~~i~~~~g--~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~ 91 (190)
T 1hzt_A 27 ADTRLHLAFSSWLFNAKG--QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVE 91 (190)
T ss_dssp ----CEECEEEEEECTTC--CEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCC
T ss_pred cCCceEEEEEEEEEcCCC--EEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCC
Confidence 557755555556554433 79999985 379999 99999999999999999999999964
No 50
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=98.77 E-value=1.2e-08 Score=84.26 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=68.3
Q ss_pred eeEEEEEEEEecCCCCEEEEEEcc-----CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEEecC
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLG-----TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNWWRP 148 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~-----~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~wwRp 148 (214)
+..+.+|+++++. +|||+++. .+.|.||||++++||+..+|++|||.||+|. +....+.++.++..
T Consensus 48 ~~~av~vl~~~~~---~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl------~~~~~~~l~~~~~~ 118 (198)
T 1vhz_A 48 NREAVMIVPIVDD---HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF------GANDLTFLKKLSMA 118 (198)
T ss_dssp CCCEEEEEEEETT---EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSE------EEEEEEEEEEEECC
T ss_pred CCCEEEEEEEECC---EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCC------CcCceEEEEEEeCC
Confidence 3456666665554 99999753 2479999999999999999999999999995 44555677776521
Q ss_pred CCCCCCCCCCCCCCCCccceeEEEeeeCCCC---C---CCCceEEeecccccccC
Q psy16776 149 NFEPPQYPYVPVHITSPKEHRRLFLVQLPER---V---PKNYKLVAAPLVELYDN 197 (214)
Q Consensus 149 ~Fe~~~yPYlP~Hit~PKE~~klf~V~Lpe~---v---p~n~kL~AvPLfely~N 197 (214)
|.+ ..+...+|++..... . .....+.-+|+=|+.+-
T Consensus 119 ----------~~~---~~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 160 (198)
T 1vhz_A 119 ----------PSY---FSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDL 160 (198)
T ss_dssp ----------TTT---CCCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGG
T ss_pred ----------CCc---cCcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHH
Confidence 111 124556676654221 1 12345666777777654
No 51
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=98.76 E-value=1.3e-08 Score=78.75 Aligned_cols=65 Identities=12% Similarity=0.056 Sum_probs=43.8
Q ss_pred eeEEEEEEEEecC-CCCEEEEEEccCc---eeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 74 RRSVDGVLLVHEH-GLPHVLMLQLGTT---FFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 74 RrsV~aVilvh~~-~~phVLLLQ~~~~---~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
+.+|.+||. +++ +...||+.++..+ .|.||||++++||+..+|++||+.||+|. +..+.+.++..
T Consensus 8 ~~~~~~ii~-~~~~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl------~~~~~~~~~~~ 76 (155)
T 2b06_A 8 ILTNICLIE-DLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGL------TIQNPQLVGIK 76 (155)
T ss_dssp EEEEEEEEE-ETTTTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSE------EEESCEEEEEE
T ss_pred EEEEEEEEE-ECCCCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCc------cccCCcEEEEE
Confidence 445555554 332 3344888877642 26999999999999999999999999995 34444555543
No 52
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=98.75 E-value=1.1e-08 Score=83.53 Aligned_cols=54 Identities=15% Similarity=0.269 Sum_probs=43.2
Q ss_pred eEEEEEEEEecCCCCEEEEEEcc-CceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQLG-TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~~-~~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
+-+.++++++. +..+|||+|+. .+.|.||||++++||+..+|++||+.||+|..
T Consensus 45 h~~~~~vv~~~-~~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 45 HLTSSAFAVNK-ERNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVK 99 (197)
T ss_dssp EEEEEEEEECT-TSCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCS
T ss_pred cEEEEEEEEEC-CCCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 33444444433 33599999876 47999999999999999999999999999974
No 53
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=98.75 E-value=1.3e-08 Score=80.10 Aligned_cols=63 Identities=19% Similarity=0.174 Sum_probs=46.1
Q ss_pred EEEEEEEEecCCCCEEEEEEccC----ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 76 SVDGVLLVHEHGLPHVLMLQLGT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 76 sV~aVilvh~~~~phVLLLQ~~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
.+.++++. +.+..+|||+|+.. |.|.||||++++||+..+|+.||+.||+|. +....++++.+
T Consensus 11 ~~v~~vi~-~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~~~~~~~~~ 77 (161)
T 3exq_A 11 LVTMVMVT-DPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGL------RLSGVTFCGTC 77 (161)
T ss_dssp EEEEEEEB-CTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCC------EESCCEEEEEE
T ss_pred EEEEEEEE-eCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCc------EecCCcEEEEE
Confidence 33334433 33335899999876 356699999999999999999999999996 33344556654
No 54
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.3e-08 Score=77.97 Aligned_cols=52 Identities=23% Similarity=0.492 Sum_probs=42.5
Q ss_pred EEEEEEEecCCCCEEEEEEcc-CceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 77 VDGVLLVHEHGLPHVLMLQLG-TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 77 V~aVilvh~~~~phVLLLQ~~-~~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
+.+++++++ +..+|||+|+. .+.|.||||.+++||+..+++.||+.||+|..
T Consensus 6 ~~~~~i~~~-~~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~ 58 (146)
T 2jvb_A 6 VRGAAIFNE-NLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFD 58 (146)
T ss_dssp CEEEEEBCT-TSSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCC
T ss_pred EEEEEEEeC-CCCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCC
Confidence 344555433 23589999986 47999999999999999999999999999964
No 55
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.71 E-value=8.1e-09 Score=88.60 Aligned_cols=108 Identities=22% Similarity=0.307 Sum_probs=73.5
Q ss_pred cCceeEEEEEEEEecCCC-------CEEEEEEcc-CceeeeCCccccCCC-CHHHHHHHHHHhhhCCCCCCccceEEece
Q psy16776 71 IGMRRSVDGVLLVHEHGL-------PHVLMLQLG-TTFFKLPGGELNQGE-DEIEGLKRLLSDTLGRRDGVKQEWIVEDT 141 (214)
Q Consensus 71 ~GmRrsV~aVilvh~~~~-------phVLLLQ~~-~~~f~LPGGrle~GE-~e~egLkReL~EeLg~~~~~~~~~eVge~ 141 (214)
.|-|+++.+.+-+.+.+. -+.+|+|.. +|.|.||||++++|| +.++||.|||.||+|.. .++.+++
T Consensus 18 ~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~-----~V~~~~y 92 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCL-----RLTEADY 92 (214)
T ss_dssp TTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC--------CCCGGGE
T ss_pred cCccEeeEEEEEcCCccccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCe-----eeeeeee
Confidence 367999999888765322 355677765 689999999999999 99999999999999951 2334455
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCccceeEEEeeeCCCC----------CC-----CCceEEeecccccccC
Q psy16776 142 IGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER----------VP-----KNYKLVAAPLVELYDN 197 (214)
Q Consensus 142 lg~wwRp~Fe~~~yPYlP~Hit~PKE~~klf~V~Lpe~----------vp-----~n~kL~AvPLfely~N 197 (214)
+.+...+ || .++ +--+|.+++.+. -- ..+=++-|||+.+-|.
T Consensus 93 ~~s~~~~------yp---~~V-----~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D~ 149 (214)
T 3kvh_A 93 LSSHLTE------GP---HRV-----VAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDR 149 (214)
T ss_dssp EEEEEC-------------CE-----EEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCTTS
T ss_pred EEEEecc------CC---CEE-----EEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEeccC
Confidence 5443221 22 222 246888888764 12 2455899999999884
No 56
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=98.71 E-value=2.2e-08 Score=82.69 Aligned_cols=62 Identities=16% Similarity=0.221 Sum_probs=48.0
Q ss_pred EEEEEEEEecCCCCEEEEEEcc-----CceeeeCCcccc-CCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 76 SVDGVLLVHEHGLPHVLMLQLG-----TTFFKLPGGELN-QGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 76 sV~aVilvh~~~~phVLLLQ~~-----~~~f~LPGGrle-~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
.+.+|+++.+ .-+|||+|+. .+.|.||||.++ +||+..++++|||.||+|. +....+.++.+
T Consensus 44 ~av~v~i~~~--~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl------~~~~~~~l~~~ 111 (207)
T 1mk1_A 44 GAVAIVAMDD--NGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGL------QASTWQVLVDL 111 (207)
T ss_dssp CEEEEEECCT--TSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCE------EEEEEEEEEEE
T ss_pred CEEEEEEEcC--CCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCC------cccccEEEEEE
Confidence 4555555533 3489999864 358999999999 9999999999999999995 44555677765
No 57
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=98.65 E-value=3.8e-08 Score=85.83 Aligned_cols=56 Identities=14% Similarity=0.347 Sum_probs=46.0
Q ss_pred ceeEEEEEEEEecCCCCEEEEEEcc--CceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 73 MRRSVDGVLLVHEHGLPHVLMLQLG--TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 73 mRrsV~aVilvh~~~~phVLLLQ~~--~~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
.+..|.|++++++ ..-+|||+|+. .+.|.||||++++||+..+|++||+.||+|..
T Consensus 99 ~~v~~v~avv~~~-~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~ 156 (271)
T 2a6t_A 99 TRIPVRGAIMLDM-SMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFD 156 (271)
T ss_dssp CCCCEEEEEEBCS-SSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred CCCCeEEEEEEEC-CCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCC
Confidence 3556667776653 23499999985 47999999999999999999999999999974
No 58
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=98.64 E-value=3.5e-08 Score=76.76 Aligned_cols=55 Identities=18% Similarity=0.143 Sum_probs=44.0
Q ss_pred ceeEEEEEEEEecCCCCEEEEEEccC-----ceeeeCCccccCCCCHH-HHHHHHHHhhhC
Q psy16776 73 MRRSVDGVLLVHEHGLPHVLMLQLGT-----TFFKLPGGELNQGEDEI-EGLKRLLSDTLG 127 (214)
Q Consensus 73 mRrsV~aVilvh~~~~phVLLLQ~~~-----~~f~LPGGrle~GE~e~-egLkReL~EeLg 127 (214)
.|..+++||+..+...-+|||.|+.. |.|.||||++++||+.. +++.||+.||+|
T Consensus 18 ~~~~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g 78 (155)
T 1x51_A 18 EESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAG 78 (155)
T ss_dssp EEEEEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSC
T ss_pred eEEEEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhC
Confidence 36667777654321124899999864 68999999999999996 999999999999
No 59
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.63 E-value=7.8e-08 Score=85.88 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=47.5
Q ss_pred CCCCEEEEEEccC-ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 86 HGLPHVLMLQLGT-TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 86 ~~~phVLLLQ~~~-~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
++..+|||+|+.. +.|.||||++++||+..+|++||+.||+|. +..++++++..
T Consensus 35 ~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl------~~~~~~~l~~~ 89 (364)
T 3fjy_A 35 LDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGS------PVKLGPYLCEV 89 (364)
T ss_dssp HTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSC------CEEEEEEEEEE
T ss_pred CCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCC------eeeeccccceE
Confidence 4567999999875 899999999999999999999999999996 66777888764
No 60
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=98.63 E-value=7.2e-08 Score=79.87 Aligned_cols=53 Identities=15% Similarity=0.285 Sum_probs=40.9
Q ss_pred EEEEEEEEecC-CCCEEEEEEc--c---CceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 76 SVDGVLLVHEH-GLPHVLMLQL--G---TTFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 76 sV~aVilvh~~-~~phVLLLQ~--~---~~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
+|..+.++.+. +..+|||++. . .+.|.||||.+++||+..+|++|||.||+|.
T Consensus 63 av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl 121 (212)
T 2dsc_A 63 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGY 121 (212)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 44444444333 3568988873 2 2489999999999999999999999999996
No 61
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=98.63 E-value=9.4e-08 Score=83.63 Aligned_cols=62 Identities=11% Similarity=0.082 Sum_probs=48.6
Q ss_pred EEEEEEEEecCCCCEEEEEEccC---ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEEE
Q psy16776 76 SVDGVLLVHEHGLPHVLMLQLGT---TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGNW 145 (214)
Q Consensus 76 sV~aVilvh~~~~phVLLLQ~~~---~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~w 145 (214)
.+.+++++.+. -+|||.|+.. |.|.||||.+++||+.++++.||+.||+|. +....++++..
T Consensus 140 ~~~viv~v~~~--~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl------~v~~~~~~~~~ 204 (269)
T 1vk6_A 140 APCIIVAIRRD--DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGI------KVKNLRYVTSQ 204 (269)
T ss_dssp EEEEEEEEEET--TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCC------EEEEEEEEEEE
T ss_pred CcEEEEEEEeC--CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCc------eeeeEEEEEEE
Confidence 34444444443 3899999863 799999999999999999999999999996 45556677764
No 62
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=98.63 E-value=5.7e-08 Score=76.53 Aligned_cols=53 Identities=21% Similarity=0.337 Sum_probs=41.9
Q ss_pred eeEEEEEEEEecCCCCEEEEEEcc------Cceee-eCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLG------TTFFK-LPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~------~~~f~-LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
.++|.++++ ..++ +|||.|+. .+.|. ||||.+++||+..+|++||+.||+|..
T Consensus 34 ~~~v~v~i~-~~~~--~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~ 93 (171)
T 1q27_A 34 VRVVNAFLR-NSQG--QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVE 93 (171)
T ss_dssp CEEEEEEEE-ETTT--EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCT
T ss_pred ceEEEEEEE-CCCC--eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCc
Confidence 344444444 3333 89999984 36898 999999999999999999999999974
No 63
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.62 E-value=6.3e-08 Score=84.17 Aligned_cols=51 Identities=31% Similarity=0.474 Sum_probs=43.3
Q ss_pred eeEEEEEEEEecCCCCEEEEEEcc----CceeeeCCccccCCCCHHHHHHHHHHhhhCC
Q psy16776 74 RRSVDGVLLVHEHGLPHVLMLQLG----TTFFKLPGGELNQGEDEIEGLKRLLSDTLGR 128 (214)
Q Consensus 74 RrsV~aVilvh~~~~phVLLLQ~~----~~~f~LPGGrle~GE~e~egLkReL~EeLg~ 128 (214)
+.+|.+|++ +++ +|||+|+. .+.|.||||.+++||+..+|++||+.||+|.
T Consensus 203 ~~~v~~vi~-~~~---~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl 257 (341)
T 2qjo_A 203 FITTDAVVV-QAG---HVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRL 257 (341)
T ss_dssp EEEEEEEEE-ETT---EEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred ceEEEEEEE-eCC---EEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCC
Confidence 456666665 443 89999987 3789999999999999999999999999996
No 64
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=98.60 E-value=7.1e-08 Score=82.30 Aligned_cols=67 Identities=18% Similarity=0.348 Sum_probs=51.3
Q ss_pred hcCc-eeEEEEEEEEecCCCCEEEEEEccC--------ceeee-CCccccCCCC--H----HHHHHHHHHhhhCCCCCCc
Q psy16776 70 KIGM-RRSVDGVLLVHEHGLPHVLMLQLGT--------TFFKL-PGGELNQGED--E----IEGLKRLLSDTLGRRDGVK 133 (214)
Q Consensus 70 ~~Gm-RrsV~aVilvh~~~~phVLLLQ~~~--------~~f~L-PGGrle~GE~--e----~egLkReL~EeLg~~~~~~ 133 (214)
.+++ +..+.++|+.+++ +|||+||.. +.|.+ |||++++||+ + .+|++||+.||+|.
T Consensus 62 ~d~~~~q~i~~~II~~~g---rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl----- 133 (211)
T 3e57_A 62 YDETTKQVIPYVVIMDGD---RVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDV----- 133 (211)
T ss_dssp TCTTEEEEEEEEEEEETT---EEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEE-----
T ss_pred cCCcccceEEEEEEEECC---EEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCC-----
Confidence 3444 6666666666554 899999953 46888 9999999999 5 89999999999995
Q ss_pred cceEEeceEEEE
Q psy16776 134 QEWIVEDTIGNW 145 (214)
Q Consensus 134 ~~~eVge~lg~w 145 (214)
+.+...++|..
T Consensus 134 -~v~~~~~ig~~ 144 (211)
T 3e57_A 134 -SLRELEFLGLI 144 (211)
T ss_dssp -EEEEEEEEEEE
T ss_pred -eeeccEEEEEE
Confidence 67778888875
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.58 E-value=7.8e-08 Score=84.27 Aligned_cols=51 Identities=27% Similarity=0.442 Sum_probs=42.3
Q ss_pred eEEEEEEEEecCCCCEEEEEEccC----ceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQLGT----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~~~----~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
.+|.+||+ +++ +|||+|+.. +.|.||||++++||+..+|+.||+.||+|..
T Consensus 209 ~~v~~vv~-~~~---~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~ 263 (352)
T 2qjt_B 209 VTVDALVI-VND---HILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNIN 263 (352)
T ss_dssp EEEEEEEE-ETT---EEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCS
T ss_pred eEEEEEEE-ECC---EEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCC
Confidence 44444444 443 899999874 7899999999999999999999999999963
No 66
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=98.57 E-value=8.8e-08 Score=79.60 Aligned_cols=102 Identities=10% Similarity=0.160 Sum_probs=64.7
Q ss_pred eEEEEEEEEecCCCCEEEEEEc-c---------CceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEE
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQL-G---------TTFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~-~---------~~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ 144 (214)
..+.+|++++. +.-+|||++. . .+.|.||||++++||+..+|++|||.||+|..- ..+ +.++.
T Consensus 57 ~~av~vl~~~~-~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~---~~~---~~l~~ 129 (209)
T 1g0s_A 57 GHAAVLLPFDP-VRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIV---KRT---KPVLS 129 (209)
T ss_dssp CCEEEEEEEET-TTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCC---CCE---EEEEE
T ss_pred CCEEEEEEEEC-CCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCccc---CcE---EEeEE
Confidence 34556665552 2238988753 1 257999999999999999999999999999732 123 35565
Q ss_pred EecCCCCCCCCCCCCCCCCCccceeEEEeeeCCCC-C---------CCCceEEeeccccccc
Q psy16776 145 WWRPNFEPPQYPYVPVHITSPKEHRRLFLVQLPER-V---------PKNYKLVAAPLVELYD 196 (214)
Q Consensus 145 wwRp~Fe~~~yPYlP~Hit~PKE~~klf~V~Lpe~-v---------p~n~kL~AvPLfely~ 196 (214)
+|.. |. ...|...+|++..... + .....+.-+|+=|+.+
T Consensus 130 ~~~~----------~g---~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~ 178 (209)
T 1g0s_A 130 FLAS----------PG---GTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQ 178 (209)
T ss_dssp EESC----------TT---TBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHH
T ss_pred EecC----------CC---ccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHH
Confidence 4321 11 1235667787775221 1 1124677778777665
No 67
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=98.55 E-value=2e-07 Score=77.78 Aligned_cols=63 Identities=24% Similarity=0.332 Sum_probs=50.0
Q ss_pred HHHhhcCceeEEEEEEEEec--------CCCCEEEEEEccCceeeeCCccccCCC-CHHHHHHHHHHhhhCC
Q psy16776 66 DEFEKIGMRRSVDGVLLVHE--------HGLPHVLMLQLGTTFFKLPGGELNQGE-DEIEGLKRLLSDTLGR 128 (214)
Q Consensus 66 ~~y~~~GmRrsV~aVilvh~--------~~~phVLLLQ~~~~~f~LPGGrle~GE-~e~egLkReL~EeLg~ 128 (214)
+.....+.++++.+++.... ++..+||+.|+..+.|.||||++++|| +..+|+.||+.||+|.
T Consensus 25 ~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl 96 (212)
T 1u20_A 25 ESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGP 96 (212)
T ss_dssp HHHSCSSCEEEEEEEEEEECCCEETTTEECCEEEEEEEETTSCEECSEEEECTTTSCHHHHHHHHHHHHHCG
T ss_pred HHhhcCCCcccceEEEeCCCceEEEEEEecCCEEEEEEeCCCeEECCCcccCCCCCCHHHHHHHHHHHHHCC
Confidence 44444566788877775421 123479998888899999999999999 9999999999999996
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.47 E-value=6.5e-08 Score=87.43 Aligned_cols=49 Identities=18% Similarity=0.359 Sum_probs=41.9
Q ss_pred CEEEEEEccC-----ceeeeCCccccCCCCHHHHHHHHHHhhhCCCCCCccceEEeceEEE
Q psy16776 89 PHVLMLQLGT-----TFFKLPGGELNQGEDEIEGLKRLLSDTLGRRDGVKQEWIVEDTIGN 144 (214)
Q Consensus 89 phVLLLQ~~~-----~~f~LPGGrle~GE~e~egLkReL~EeLg~~~~~~~~~eVge~lg~ 144 (214)
-+|||.||.+ |.|.||||++++| +..+++.||+.||+|. +.++.+.++.
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl------~v~~~~~l~~ 305 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGL------QVELTEPIVS 305 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSC------CEEECCCCCE
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCC------ceeeeccccc
Confidence 3899999974 6899999999999 9999999999999996 5566666654
No 69
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=98.47 E-value=2e-07 Score=76.12 Aligned_cols=53 Identities=11% Similarity=0.186 Sum_probs=40.0
Q ss_pred eEEEEEEEEecCCCCEEEEEEc-----------cCceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 75 RSVDGVLLVHEHGLPHVLMLQL-----------GTTFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 75 rsV~aVilvh~~~~phVLLLQ~-----------~~~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
..+.+|++.+. +.-+|||++. ..+.|.||||.++ ||+..+|++||+.||+|..
T Consensus 45 ~~av~v~~~~~-~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~ 108 (191)
T 3o6z_A 45 GNGATILLYNT-KKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYE 108 (191)
T ss_dssp CCEEEEEEEET-TTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CC
T ss_pred CCEEEEEEEEC-CCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCc
Confidence 33445555543 2348888865 3468999999999 9999999999999999973
No 70
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.46 E-value=2.5e-07 Score=81.42 Aligned_cols=42 Identities=19% Similarity=0.328 Sum_probs=38.3
Q ss_pred CCEEEEEEccC-ceeeeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 88 LPHVLMLQLGT-TFFKLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 88 ~phVLLLQ~~~-~~f~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
..+|||+|+.. +.|.||||.+++||+..+|++|||.||+|..
T Consensus 138 ~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~ 180 (292)
T 1q33_A 138 ILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNS 180 (292)
T ss_dssp CEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCG
T ss_pred ceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCc
Confidence 45899999874 8999999999999999999999999999963
No 71
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.27 E-value=6.2e-07 Score=75.78 Aligned_cols=39 Identities=28% Similarity=0.430 Sum_probs=35.6
Q ss_pred EEEEEEccCceeeeCCccccCCC-CHHHHHHHHHHhhhCC
Q psy16776 90 HVLMLQLGTTFFKLPGGELNQGE-DEIEGLKRLLSDTLGR 128 (214)
Q Consensus 90 hVLLLQ~~~~~f~LPGGrle~GE-~e~egLkReL~EeLg~ 128 (214)
.+|++++..+.|.||||++++|| +..+|++|||.||+|.
T Consensus 66 ~~ll~~r~~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl 105 (217)
T 2xsq_A 66 AILMQMRFDGRLGFPGGFVDTQDRSLEDGLNRELREELGE 105 (217)
T ss_dssp EEEEEEETTSCEECSEEECCTTCSSHHHHHHHHHHHHHCG
T ss_pred cEEEEEccCCeEECCceecCCCCCCHHHHHHHHHHHHHCC
Confidence 56777777789999999999999 9999999999999996
No 72
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=98.22 E-value=7.5e-07 Score=75.52 Aligned_cols=32 Identities=19% Similarity=0.074 Sum_probs=29.6
Q ss_pred CceeeeCCccccC-CCCHHHHHHHHHHhhhCCC
Q psy16776 98 TTFFKLPGGELNQ-GEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 98 ~~~f~LPGGrle~-GE~e~egLkReL~EeLg~~ 129 (214)
.+.|.||||.+++ ||+..+|++|||.||+|..
T Consensus 94 ~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~ 126 (218)
T 3q91_A 94 GVTVELCAGLVDQPGLSLEEVACKEAWEECGYH 126 (218)
T ss_dssp CEEEECEEEECCSSSCCHHHHHHHHHHHHHCBC
T ss_pred CeEEECCcceeCCCCCCHHHHHHHHHHHHhCCc
Confidence 3589999999999 9999999999999999974
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.19 E-value=7.7e-07 Score=76.54 Aligned_cols=57 Identities=19% Similarity=0.333 Sum_probs=46.0
Q ss_pred ceeEEEEEEEEecCCC-CEEEEEEccC------ceeeeCCccccCCCCH--------------------HHHHHHHHHhh
Q psy16776 73 MRRSVDGVLLVHEHGL-PHVLMLQLGT------TFFKLPGGELNQGEDE--------------------IEGLKRLLSDT 125 (214)
Q Consensus 73 mRrsV~aVilvh~~~~-phVLLLQ~~~------~~f~LPGGrle~GE~e--------------------~egLkReL~Ee 125 (214)
.|.++..|++....+. ++|||+||.. |.|.||||++++||++ .+|..||+.||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 4777766666543333 8999999974 6899999999999985 78999999999
Q ss_pred hCCC
Q psy16776 126 LGRR 129 (214)
Q Consensus 126 Lg~~ 129 (214)
+|..
T Consensus 87 ~Gl~ 90 (232)
T 3qsj_A 87 IGWL 90 (232)
T ss_dssp HSCC
T ss_pred hCce
Confidence 9963
No 74
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=98.00 E-value=8.4e-06 Score=69.57 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=45.4
Q ss_pred hcCceeEEEEEEEEecCCCCEEEEEEccC------ceeeeC-CccccCC------CCH---HHHHHHHHHhhhCCC
Q psy16776 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGT------TFFKLP-GGELNQG------EDE---IEGLKRLLSDTLGRR 129 (214)
Q Consensus 70 ~~GmRrsV~aVilvh~~~~phVLLLQ~~~------~~f~LP-GGrle~G------E~e---~egLkReL~EeLg~~ 129 (214)
+.|+.+.+.+|++....+ +|||.||.. |.|.+| ||.+++| |+. .+|++|||.||+|+.
T Consensus 54 ~~g~~h~av~v~v~~~~g--~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~ 127 (235)
T 2dho_A 54 EKGLLHRAFSVFLFNTEN--KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIP 127 (235)
T ss_dssp TTTCCEEEEEEEEECTTC--CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCC
T ss_pred CCCceEEEEEEEEEcCCC--EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCC
Confidence 558766666766665443 788888753 589999 5999999 774 899999999999974
No 75
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=97.91 E-value=1.3e-05 Score=68.90 Aligned_cols=58 Identities=19% Similarity=0.241 Sum_probs=45.8
Q ss_pred hcCceeEEEEEEEEecCCCCEEEEEEccC------ceeeeCC-ccccCC------CCH---HHHHHHHHHhhhCCC
Q psy16776 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGT------TFFKLPG-GELNQG------EDE---IEGLKRLLSDTLGRR 129 (214)
Q Consensus 70 ~~GmRrsV~aVilvh~~~~phVLLLQ~~~------~~f~LPG-Grle~G------E~e---~egLkReL~EeLg~~ 129 (214)
+.|+++.+.+|++....+ +|||.||.. |.|.+|+ |.+++| |+. .+|++|||.||+|+.
T Consensus 65 ~~g~~h~av~v~v~~~~g--~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~ 138 (246)
T 2pny_A 65 EKGLLHRAFSVVLFNTKN--RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIP 138 (246)
T ss_dssp TTTCCEEEEEEEEECTTC--CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEEEEEEEEeCCC--EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCC
Confidence 568766676766665443 788888753 5799995 999999 887 899999999999975
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=97.63 E-value=7.4e-05 Score=67.02 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=49.4
Q ss_pred cCceeEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhhh-CCCCCCccceEEeceEEEEecCC
Q psy16776 71 IGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDTL-GRRDGVKQEWIVEDTIGNWWRPN 149 (214)
Q Consensus 71 ~GmRrsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~EeL-g~~~~~~~~~eVge~lg~wwRp~ 149 (214)
.|.+..| ++|+.+++ +|||+ ..+| |.||||.+ ||++.++..||..||. |. +++++..++.|-.+.
T Consensus 180 ~~p~~~v-gaii~~~g---~vLL~-~~~G-W~LPG~~~--~~~~~~~a~RE~~EEttGl------~v~~~~L~~v~~~~~ 245 (321)
T 3rh7_A 180 VEGEIRL-GAVLEQQG---AVFLA-GNET-LSLPNCTV--EGGDPARTLAAYLEQLTGL------NVTIGFLYSVYEDKS 245 (321)
T ss_dssp HHSCEEE-EEEEESSS---CEEEB-CSSE-EBCCEEEE--SSSCHHHHHHHHHHHHHSS------CEEEEEEEEEEECTT
T ss_pred cCCcceE-EEEEEECC---EEEEe-eCCC-ccCCcccC--CCChhHHHHHHHHHHhcCC------EEeeceEEEEEEcCC
Confidence 3455555 66666655 78888 5568 99999866 4555568999999998 96 899999999987655
No 77
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=97.53 E-value=0.00012 Score=65.40 Aligned_cols=60 Identities=10% Similarity=-0.012 Sum_probs=48.9
Q ss_pred hcCc-eeEEEEEEEEecCCCCEEEEEEccC------cee-eeCCccccCCCCHHHHHHHHHHhhhCCC
Q psy16776 70 KIGM-RRSVDGVLLVHEHGLPHVLMLQLGT------TFF-KLPGGELNQGEDEIEGLKRLLSDTLGRR 129 (214)
Q Consensus 70 ~~Gm-RrsV~aVilvh~~~~phVLLLQ~~~------~~f-~LPGGrle~GE~e~egLkReL~EeLg~~ 129 (214)
..|+ .++|...+++.+.+..++|+-||.. |.| .++||.+++||+..+|+.||+.||+|+.
T Consensus 113 ~~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~ 180 (300)
T 3dup_A 113 TFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLP 180 (300)
T ss_dssp GGTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCC
T ss_pred ccceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 3476 5666666766655566999988874 678 6999999999999999999999999974
No 78
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=60.73 E-value=2.4 Score=33.04 Aligned_cols=51 Identities=27% Similarity=0.543 Sum_probs=34.5
Q ss_pred hcCceeEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHH---hhhCCCCCCccceEEec
Q psy16776 70 KIGMRRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLS---DTLGRRDGVKQEWIVED 140 (214)
Q Consensus 70 ~~GmRrsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~---EeLg~~~~~~~~~eVge 140 (214)
+..++..+.+||++|.| |+|-.+|.+.|++ +-|+|. +-+|+. ..+.+.||+
T Consensus 61 ~~Al~~~A~~vIl~HNH-----------------PSG~~~PS~~D~~-~T~~l~~a~~ll~I~--llDHiIig~ 114 (126)
T 2qlc_A 61 KAAIRESAHSIILVHNH-----------------PSGDVQPSNADKQ-VTSILKKAGDLLQIE--LLDHVIVGN 114 (126)
T ss_dssp HHHHHTTCSEEEEEEEC-----------------SSSCCSCCHHHHH-HHHHHHHHHHHHTCE--EEEEEEECS
T ss_pred HHHHHcCCcEEEEEecC-----------------CCCCCCCCHHHHH-HHHHHHHHHHHCCCe--EeeeEEEeC
Confidence 33467778999999998 8999999877765 333444 445542 335566664
No 79
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=56.69 E-value=76 Score=30.12 Aligned_cols=118 Identities=14% Similarity=0.146 Sum_probs=62.2
Q ss_pred HHhhcCceeEEEEEEEE--ecCCCCEEEEEEccCceeeeCCccccCCCCHHHHHHHHHHhh---hCCCCCCccceEEece
Q psy16776 67 EFEKIGMRRSVDGVLLV--HEHGLPHVLMLQLGTTFFKLPGGELNQGEDEIEGLKRLLSDT---LGRRDGVKQEWIVEDT 141 (214)
Q Consensus 67 ~y~~~GmRrsV~aVilv--h~~~~phVLLLQ~~~~~f~LPGGrle~GE~e~egLkReL~Ee---Lg~~~~~~~~~eVge~ 141 (214)
.|.-.|++.|+..-+-+ ..+++.| ..|.|.+.||..|--=.=.--.|..+++- ++.. .+++.+.=-
T Consensus 298 gfll~gi~~sa~v~~~i~~~~~~~~~------~ag~f~vlgg~~empw~~dr~~k~dit~~~~~~~~~---~~~~~~~~~ 368 (491)
T 3l6w_A 298 GFVLSGIRTTAVVKVYIKSGTDSDDE------YAGSFVILGGAKEMPWAYERLYRFDITETVHNLNLT---DDHVKFRFD 368 (491)
T ss_pred eeeecCCcceEEEEEEEEcCCCCCce------eccEEEEccCcccCcchhhhhhHHHHHHHHHHcCCC---CCceEEEEE
Confidence 34445777777665544 2344433 24799999999884333334566667654 4544 233333322
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCccceeEEEee-------eCCCC--CCCCceEEeeccccc
Q psy16776 142 IGNWWRPNFEPPQYPYVPVHITSPKEHRRLFLV-------QLPER--VPKNYKLVAAPLVEL 194 (214)
Q Consensus 142 lg~wwRp~Fe~~~yPYlP~Hit~PKE~~klf~V-------~Lpe~--vp~n~kL~AvPLfel 194 (214)
+-.+--..-++...|+ |.-|-+|.+..---+| .||+| |+|+-++...|.=+=
T Consensus 369 ~~~~~g~~l~~~~lp~-ptii~~pa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (491)
T 3l6w_A 369 LKKYDHTELDASVLPA-PIIVRRPNNAVFDIIEIPIGKDVNLPPKVVVKRGTKIMFMSVDEA 429 (491)
T ss_pred EEEeCCcCCccccCCC-CeEEEecCCccceEEEEeccCCCCCCCeeEeecCCEEEEEecccc
Confidence 2222222222222222 3334455544422222 67888 999999988776543
No 80
>1kvd_B SMK toxin; halotolerant yeast; 1.80A {Pichia farinosa} SCOP: d.70.1.2 PDB: 1kve_B
Probab=27.21 E-value=1.6e+02 Score=20.56 Aligned_cols=65 Identities=22% Similarity=0.399 Sum_probs=43.7
Q ss_pred eEeccCCCcccCCCChHHHHHHhHHHHhhcCc--eeEEEEEEEEecCCCCEEEEEEccCceeeeCCccccCCCCH
Q psy16776 42 YTFDIKDPLFEKDSSVPARFQRMRDEFEKIGM--RRSVDGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNQGEDE 114 (214)
Q Consensus 42 Y~F~~k~~~~ekd~sv~~Rl~rl~~~y~~~Gm--RrsV~aVilvh~~~~phVLLLQ~~~~~f~LPGGrle~GE~e 114 (214)
+..|.+|+...-.+| ...|+.|-....++|. -..|.+--+ ..+...|.+++ |.|-||.-+||-++
T Consensus 7 wgvgadeaidkgtps-kndlqnmsadlakngfkghqgvacstv--kdgnkdvymik-----fslaggsndpggsp 73 (77)
T 1kvd_B 7 WGVGADEAIDKGTPS-KNDLQNMSADLAKNGFKGHQGVACSTV--KDGNKDVYMIK-----FSLAGGSNDPGGSP 73 (77)
T ss_dssp EEEEEESSCCCCCCC-HHHHHHHHHHHHHHTTTTSCEEEEEEE--EETTEEEEEEE-----EEECSCCSCCCSCC
T ss_pred eeccchhhhhcCCCC-hhhHHHhhHHHHhcCcccccceeeeee--ecCCccEEEEE-----EEeccCCCCCCCCC
Confidence 455677766544443 5668889888888887 344544444 44556677766 88999998888653
No 81
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=23.65 E-value=56 Score=23.13 Aligned_cols=27 Identities=30% Similarity=0.621 Sum_probs=19.9
Q ss_pred CCCCEEEEE-EccCceeeeCCccccCCC
Q psy16776 86 HGLPHVLML-QLGTTFFKLPGGELNQGE 112 (214)
Q Consensus 86 ~~~phVLLL-Q~~~~~f~LPGGrle~GE 112 (214)
.+.|.++++ +.+.-.+...||++..+.
T Consensus 90 ~~~Pt~~~~d~~G~~~~~~~g~~~~~~~ 117 (133)
T 3fk8_A 90 DGIPAVVVVNSDGKVRYTTKGGELANAR 117 (133)
T ss_dssp GCSSEEEEECTTSCEEEECCSCTTTTGG
T ss_pred CccceEEEECCCCCEEEEecCCcccccc
Confidence 567898888 555557788898887543
Done!