RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16778
(433 letters)
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 107 bits (268), Expect = 3e-28
Identities = 74/161 (45%), Positives = 109/161 (67%), Gaps = 2/161 (1%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWL 96
++V+MGVSGSGKS + +A +L F+DGD LHP+ NI+KM++ +PLND+DR+PWL
Sbjct: 5 DHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWL 64
Query: 97 NNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNN-RVVFIYLKAEFGVILSRLQKRAE 155
+N + N ++VCSAL+++YRD++R N + FIYLK +F VI SRL+ R
Sbjct: 65 QALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKG 124
Query: 156 HFMPADLLESQFQTLEEPDPLVEPDVRTVSVNEPLEGIVSK 196
HF +L +QF+TL+EP E DV V +++PLEG+V+
Sbjct: 125 HFFKTQMLVTQFETLQEPGA-DETDVLVVDIDQPLEGVVAS 164
>d1tb3a1 c.1.4.1 (A:1-349) Hydroxyacid oxidase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 349
Score = 95.4 bits (236), Expect = 2e-22
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 28/203 (13%)
Query: 213 VCVDDFEQFALKVL----------------------------RIRPRVMRDLSKRTLVTD 244
VC+ DF+ A K L R+RPR +RD+SK T
Sbjct: 3 VCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTT 62
Query: 245 ALGHPVQIPIGVSPAAMQKLAHEEGEIGNAAAVGEVGGIYILSTISTTSIEELAEKTPQT 304
G + PI +SP A +A +GE A A E Y++S+ ++ S+E++ P+
Sbjct: 63 IQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEG 122
Query: 305 TKWFQLYIYRDREITKSLVQRAEKAGYKALVLTVDTNVFGTRYADIRNKFNMPSHLNIEE 364
+WFQLY+ D + K +VQRAE G+KALV+T+DT V G R D RN+ N+ +++ +++
Sbjct: 123 FRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKD 182
Query: 365 LAEKTPQTTKWFQLYIYRDREIT 387
L + +
Sbjct: 183 LRALKEEKPTQSVPVSFPKASFC 205
Score = 49.9 bits (118), Expect = 3e-07
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 367 EKTPQTTKWFQLYIYRDREITKSLVQRAEKAGYKALVLTVDTNVFGTRYADIRNKFNMPS 426
P+ +WFQLY+ D + K +VQRAE G+KALV+T+DT V G R D RN+ N+ +
Sbjct: 117 AAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA 176
Query: 427 HL 428
++
Sbjct: 177 NI 178
>d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 414
Score = 91.1 bits (225), Expect = 1e-20
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 33/187 (17%)
Query: 204 RAPPNYSDFVCVDDFEQFALKVL----------------------------RIRPRVMRD 235
P + + + DFE A + L +P+++ D
Sbjct: 17 SLLPPLDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVD 76
Query: 236 LSKRTLVTDALGHPVQIPIGVSPAAMQKLAH---EEGEIGNAAAVGEVGGIYILSTISTT 292
+ K + TD LG V +P VS A+ KL + E ++ G ++ST+++
Sbjct: 77 VRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASC 136
Query: 293 SIEELAE--KTPQTTKWFQLYIYRDREITKSLVQRAEKAGYKALVLTVDTNVFGTRYADI 350
S EE+ E + + +W+QLY+ DR+IT LV+ EK G KAL +TVD G R D+
Sbjct: 137 SPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDM 196
Query: 351 RNKFNMP 357
+ KF+
Sbjct: 197 KLKFSNT 203
>d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea)
[TaxId: 3562]}
Length = 359
Score = 87.3 bits (215), Expect = 1e-19
Identities = 72/211 (34%), Positives = 107/211 (50%), Gaps = 32/211 (15%)
Query: 211 DFVCVDDFEQFALKVL----------------------------RIRPRVMRDLSKRTLV 242
+ V+++E A + L RPR++ D++ +
Sbjct: 2 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMT 61
Query: 243 TDALGHPVQIPIGVSPAAMQKLAHEEGEIGNAAAVGEVGGIYILSTISTTSIEELAEKTP 302
T LG + +PI ++P AMQK+AH EGE A A G I LS+ +T+S+EE+A P
Sbjct: 62 TTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGP 121
Query: 303 QTTKWFQLYIYRDREITKSLVQRAEKAGYKALVLTVDTNVFGTRYADIRNKFNMPSHL-- 360
++FQLY+Y+DR + LV+RAE+AG+KA+ LTVDT G R ADI+N+F +P L
Sbjct: 122 G-IRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTL 180
Query: 361 -NIEELAEKTPQTTKWFQLYIYRDREITKSL 390
N E + L Y +I +SL
Sbjct: 181 KNFEGIDLGKMDKANDSGLSSYVAGQIDRSL 211
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 79.2 bits (194), Expect = 5e-18
Identities = 23/163 (14%), Positives = 50/163 (30%), Gaps = 5/163 (3%)
Query: 39 TVFVIMGVSGSGKSTIGESLATRLGVKF--IDGDHLHPQSNIDKMSAKQPLNDEDRRPWL 96
+ ++ G GSGKSTI E+LA GV D L ++ P + + R +
Sbjct: 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYIKHGRIDPWLPQSHQQNRMIM 64
Query: 97 NNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEH 156
+ + + +L + +I L+ + R R
Sbjct: 65 QIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYIVLRTTAAEAIERCLDRGGD 124
Query: 157 FM-PADLLESQFQTLEEPDPLVEPDVRTV--SVNEPLEGIVSK 196
+ ++ + + ++ L+ ++
Sbjct: 125 SLSDPLVVADLHSQFADLGAFEHHVLPVSGKDTDQALQSAINA 167
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase
{Bacillus subtilis [TaxId: 1423]}
Length = 329
Score = 80.6 bits (198), Expect = 2e-17
Identities = 16/174 (9%), Positives = 41/174 (23%), Gaps = 10/174 (5%)
Query: 226 LRIRPRVM--RDLSKRTLVTDALGHPVQIPIGVSP-AAMQKLAHEEGEIGNAAAVGEVGG 282
+ + L + + T PI ++ E A A + G
Sbjct: 8 ITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGI 67
Query: 283 IYILSTISTTSIEELAEKTPQTTK-----WFQLYIYRDREITKSLVQRAEKAGYKALVLT 337
+ + + + + + + + E G AL +
Sbjct: 68 PLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIH 127
Query: 338 VDTNVFGTRYADIRNKFNMPSHLNIEELAEKTPQTTKWFQLYIYRDREITKSLV 391
++ R+ IE++ + ++ + L
Sbjct: 128 LNVIQEIVMPEGDRSFSGALKR--IEQICSRVSVPVIVKEVGFGMSKASAGKLY 179
>d1p4ca_ c.1.4.1 (A:) Membrane-associated (S)-mandelate
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 353
Score = 80.4 bits (197), Expect = 3e-17
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 222 ALKVLRIRPRVMRDLSKRTLVTDALGHPVQIPIGVSPAAMQKLAHEEGEIGNAAAVGEVG 281
+ R +P+ + D+S+R+L + LG +P+ + P + +G++ A A + G
Sbjct: 40 VFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAG 99
Query: 282 GIYILSTISTTSIEELAEKTPQTTKWFQLYIYRDREITKSLVQRAEKAGYKALVLTVDTN 341
++LST S SIE+LA + + REI + +V +A GY LVLT D
Sbjct: 100 IPFVLSTASNMSIEDLARQCD--GDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVA 157
Query: 342 VFGTRYADIRNKFNMPSHLNI 362
V G R D+ N+F +P L +
Sbjct: 158 VNGYRERDLHNRFKIPPFLTL 178
Score = 43.4 bits (101), Expect = 3e-05
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 348 ADIRNKFNMPSHLNIEELAEKTPQTTKWFQLYIYRDREITKSLVQRAEKAGYKALVLTVD 407
A I + S+++IE+LA + + REI + +V +A GY LVLT D
Sbjct: 98 AGIPFVLSTASNMSIEDLARQCD--GDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTD 155
Query: 408 TNVFGTRYADIRNKFNMPSHL 428
V G R D+ N+F +P L
Sbjct: 156 VAVNGYRERDLHNRFKIPPFL 176
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 71.3 bits (173), Expect = 2e-15
Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 9/143 (6%)
Query: 40 VFVIMGVSGSGKSTIGESLATR-LGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNN 98
+ + +G GSGKST + G I+ D + + +
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGM 63
Query: 99 INRIIHQLNVDNLTG---VLVCSALRRNYRDIIR-----NNNRVVFIYLKAEFGVILSRL 150
+ + ++ + L R +V + ++ R
Sbjct: 64 QFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKRN 123
Query: 151 QKRAEHFMPADLLESQFQTLEEP 173
KR +P D+L S ++++ E
Sbjct: 124 SKRGTKAVPIDVLRSMYKSMREY 146
>d1vcfa1 c.1.4.1 (A:23-332) Isopentenyl-diphosphate delta-isomerase
{Thermus thermophilus [TaxId: 274]}
Length = 310
Score = 73.4 bits (179), Expect = 4e-15
Identities = 33/215 (15%), Positives = 62/215 (28%), Gaps = 21/215 (9%)
Query: 222 ALKVLRIRPRVMR--DLSKRTLVTDALGHPVQIPIGVSPAAMQKLAHEEGEIGNAAAVGE 279
L+ R+R + + LS+ L T LG ++ P + + E + A A
Sbjct: 5 GLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEA 64
Query: 280 VGGIYILSTISTTSIEE-------LAEKTPQTTKWFQLYIYRDREITKSLVQRAEK-AGY 331
+G +L + + + P+ L + + R + + R +
Sbjct: 65 LGVGMMLGSGRILLERPEALRSFRVRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEA 124
Query: 332 KALVLTVDTNVFGTRYADIRNKFNMPSHLNIEELAEKTPQTTKWFQLYIYRDREITKSLV 391
AL V+ + D F E L P K + R+
Sbjct: 125 DALAFHVNPLQEAVQRGD--TDFRGLVERLAELLPLPFPVMVKEVGHGLSREA------A 176
Query: 392 QRAEKAGYKALVLTVDTNVFGTRYADIRNKFNMPS 426
A+ + GT +A +
Sbjct: 177 LALRDLPLAAVDV---AGAGGTSWARVEEWVRFGE 208
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 68.9 bits (167), Expect = 2e-14
Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 22/181 (12%)
Query: 38 STVFVIMGVSGSGKSTIGESLATRLGVKFIDGD----------HLHPQSNIDKMSAKQPL 87
+ + ++ G S +GKS I L + L ++ + + A +
Sbjct: 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGV 62
Query: 88 NDEDRRPWLNN-----INRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAE 142
+ L + + + V + A + + V+++ ++ +
Sbjct: 63 SIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVGVRCD 122
Query: 143 FGVILSRLQKRAEHFMPADLLESQFQTLEEPDPLVEPDVRTVSVNEPLEGIVSK--SAIM 200
V R R + A + Q + E VE DV + ++ + ++
Sbjct: 123 GAVAEGRETARGDR--VAGMAAKQAYVVHEG---VEYDVEVDTTHKESIECAWAIAAHVV 177
Query: 201 P 201
P
Sbjct: 178 P 178
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 60.1 bits (144), Expect = 2e-11
Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 7/160 (4%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINR 101
++G G+GKSTIG LA +L ++F D D + + L E+
Sbjct: 6 FLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVI 65
Query: 102 IIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQK---RAEHFM 158
+ S R R+ + V +YL+ L+R Q+ R +
Sbjct: 66 NELTEKQGIVLATGGGSVKSRETRNRLSARG--VVVYLETTIEKQLARTQRDKKRPLLHV 123
Query: 159 PADLLESQFQTLEEPDPLVE--PDVRTVSVNEPLEGIVSK 196
E E +PL E DV + ++ + + ++
Sbjct: 124 ETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQ 163
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 59.3 bits (142), Expect = 4e-11
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 9/142 (6%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVK-FIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNN 98
+++I G +G GKST + LA +L +I+GD ++ + +DE N
Sbjct: 4 LYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHM--VVGGYRPPWESDELLALTWKN 61
Query: 99 INRIIHQLNVDNLTGVLVCSALRRNYRDIIR------NNNRVVFIYLKAEFGVILSRLQK 152
I + + VL A + + ++ + FI L +L R
Sbjct: 62 ITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDAL 121
Query: 153 RAEHFMPADLLESQFQTLEEPD 174
R + + + E
Sbjct: 122 RKKDEQMGERCLELVEEFESKG 143
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 58.4 bits (140), Expect = 8e-11
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINR 101
V +G GSGKST+ +LA L + F+D D L Q K+ + ++ R + +
Sbjct: 4 VFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQKV---SEIFEQKRENFFREQEQ 60
Query: 102 IIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEHFMPAD 161
+ + N ++ + IYLKA+F + RL K P
Sbjct: 61 KMADFFSSCEKACIATGGGFVNVSNLEKAG---FCIYLKADFEYLKKRLDKDEISKRPLF 117
Query: 162 LLESQFQTL-EEPDPLVE--PDVRTVSVNEPLEGIVSK 196
E + + L E E + N+ ++ ++S+
Sbjct: 118 YDEIKAKKLYNERLSKYEQKANFILNIENKNIDELLSE 155
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 58.1 bits (139), Expect = 1e-10
Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 9/159 (5%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDH-LHPQSNIDKMSAKQPLNDEDRRPWLNNIN 100
+I G G+GK+++ E +A L L +++ + + +
Sbjct: 9 LITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDRLL 68
Query: 101 RIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEHFMPA 160
+ + V + + ++ + + L V+ RL KR
Sbjct: 69 DFMEPIMVSR-----GNHVVDYHSSELFPERWFHMVVVLHTSTEVLFERLTKRQYSEAKR 123
Query: 161 DLLESQFQ---TLEEPDPLVEPDVRTVSVNEPLEGIVSK 196
EE E D+ V N+ LE + +
Sbjct: 124 AENMEAEIQCICEEEARDAYEDDIVLVRENDTLEQMAAT 162
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 58.0 bits (139), Expect = 1e-10
Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINR 101
++ G G GK+T+G+ LA++ G+K+I+ L + + DE+ + + +R
Sbjct: 8 LLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDG------YDEEYDCPILDEDR 61
Query: 102 IIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEHFMPAD 161
++ +L+ G + + D + L+ + V+ RL+ R +
Sbjct: 62 VVDELDNQMREG---GVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLT 118
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 54.6 bits (130), Expect = 2e-09
Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 9/161 (5%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINR 101
++G G G +T+G LA LG +F+D D ++ ++
Sbjct: 6 FMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRR-RESEA 64
Query: 102 IIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEH----- 156
+ + + L R +R + +YL A + RLQ +
Sbjct: 65 LQAVATPNRVVATGGGMVLLEQNRQFMRAHGT--VVYLFAPAEELALRLQASLQAHQRPT 122
Query: 157 FMPADLLESQFQTLEEPDPLV-EPDVRTVSVNEPLEGIVSK 196
+ E L E + L + V +P IV +
Sbjct: 123 LTGRPIAEEMEAVLREREALYQDVAHYVVDATQPPAAIVCE 163
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 53.7 bits (128), Expect = 3e-09
Identities = 22/154 (14%), Positives = 36/154 (23%), Gaps = 23/154 (14%)
Query: 29 LSPSGE--GSPSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQP 86
L S V V +G G+GKST + G ++ D L
Sbjct: 3 LPESSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSS----- 57
Query: 87 LNDEDRRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVI 146
+ +I N D + R + A
Sbjct: 58 ----CQAALRQGKRVVIDNTNPD-------VPSRARYIQCAKDAGVPCRCFNFCATIEQA 106
Query: 147 LSRLQKRAEH-----FMPADLLESQFQTLEEPDP 175
+ R + ++ S + E P
Sbjct: 107 RHNNRFREMTDPSHAPVSDMVMFSYRKQFEPPTL 140
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 51.6 bits (122), Expect = 2e-08
Identities = 23/162 (14%), Positives = 45/162 (27%), Gaps = 5/162 (3%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLND-EDRRPWLNN 98
+ G SGK I +L L + L + + + EDR +
Sbjct: 8 TIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQR 67
Query: 99 INRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEHFM 158
I + +L + A R R+ + L ++ + +
Sbjct: 68 IAFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQAGSFFLVHVATPLEHCEQSDKRGI 127
Query: 159 PADLLESQFQTLEEPDPLVE----PDVRTVSVNEPLEGIVSK 196
A + + D E D+ + + IV +
Sbjct: 128 YAAARRGEIKGFTGVDDPYETPEKADLVVDFSKQSVRSIVHE 169
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 50.8 bits (120), Expect = 3e-08
Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 11/163 (6%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINR 101
V++G+ GSGKSTIG LA LGV +D D Q ++ + E +
Sbjct: 5 VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVV 64
Query: 102 IIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEH--FMP 159
+ D + + + R + + +YL+ + R
Sbjct: 65 RAALADHDGVLSLGGGAVTSPGVRAALAGHT---VVYLEISAAEGVRRTGGNTVRPLLAG 121
Query: 160 ADLLESQFQTLEEPDPLVEP------DVRTVSVNEPLEGIVSK 196
D E + + PL D + + I+S+
Sbjct: 122 PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSR 164
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 47.4 bits (111), Expect = 7e-07
Identities = 23/162 (14%), Positives = 52/162 (32%), Gaps = 5/162 (3%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNI 99
+ G+SG+GK+T+ +L L I L + ++ + EDR + I
Sbjct: 21 TVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRI 80
Query: 100 NRIIH----QLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAE 155
+ V + + + R N R I + F + + +
Sbjct: 81 AEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGL 140
Query: 156 HFMPADLLESQFQTLEEP-DPLVEPDVRTVSVNEPLEGIVSK 196
+ F ++ + P++ + + + V +
Sbjct: 141 YKKARAGEIKGFTGIDSEYEKPEAPELVLKTDSCDVNDCVQQ 182
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 45.7 bits (107), Expect = 2e-06
Identities = 26/171 (15%), Positives = 62/171 (36%), Gaps = 16/171 (9%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNI----------DKMSAKQPLNDED 91
+++G G+GK T LA +LG+ I L ++ + A + +
Sbjct: 4 LLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDL 63
Query: 92 RRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFI--YLKAEFGVILSR 149
+++ N L G + +++ + + V+L R
Sbjct: 64 TNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLER 123
Query: 150 LQKRAEHFMPADLLESQFQTLEEP-DPLVE---PDVRTVSVNEPLEGIVSK 196
L+ R D++ ++ + + PL+E ++TV ++ + ++
Sbjct: 124 LKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFAR 174
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 43.0 bits (100), Expect = 2e-05
Identities = 9/63 (14%), Positives = 21/63 (33%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINR 101
V++G G+GK T +L R + + + L + +
Sbjct: 6 VLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDI 65
Query: 102 IIH 104
+++
Sbjct: 66 MVN 68
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 41.4 bits (96), Expect = 6e-05
Identities = 25/170 (14%), Positives = 56/170 (32%), Gaps = 16/170 (9%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDK----------MSAKQPLNDED 91
V+MG+ G+GK T E + G+ I + + + M + DE
Sbjct: 4 VLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEV 63
Query: 92 RRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQ 151
+ N L G A ++ + R + + + + +
Sbjct: 64 TIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMER 123
Query: 152 KRAEHFMPADLLESQFQTLEEPDPLVE-----PDVRTVSVNEPLEGIVSK 196
A+ A + +++ PLV+ +R ++ + +E + +
Sbjct: 124 LTADD-NEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFAD 172
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 41.5 bits (96), Expect = 7e-05
Identities = 25/189 (13%), Positives = 57/189 (30%), Gaps = 25/189 (13%)
Query: 31 PSGEGSPSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDH-LHPQSNIDKMSAKQPLND 89
P+ +V ++G G+GK T E L + L + + + +
Sbjct: 1 PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKN 60
Query: 90 EDRRPWLNNINRIIHQL------------NVDNLTGVLVCSALRRNYRDIIRNNNRVVFI 137
+ + + L + + G ++ I + ++F
Sbjct: 61 CIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFF 120
Query: 138 YLKAEFGVILSRLQKRAEHFMPADLLESQFQT-----LEEPDPLVE-----PDVRTVSVN 187
+ ++L RL +R + +D + E P++E V V +
Sbjct: 121 DCPED--IMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCD 178
Query: 188 EPLEGIVSK 196
+E +
Sbjct: 179 RSVEDVYKD 187
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 40.8 bits (94), Expect = 1e-04
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 15/134 (11%)
Query: 43 IMGVSGSGKSTIGESLATRLGVKFID-GD--------HLHPQSNIDKMSAKQPLNDEDRR 93
I G + SGKST+ + +A G ++D G L Q ++++ A L D+
Sbjct: 8 IDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQHPI 67
Query: 94 PWLNNINRI-IHQLNVDNLTGVLVCSALRRNYRDI-----IRNNNRVVFIYLKAEFGVIL 147
+ + + + ++T + + + + I +R + + + G+++
Sbjct: 68 SFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQGGIVM 127
Query: 148 SRLQKRAEHFMPAD 161
A+
Sbjct: 128 DGRDIGTVVLPQAE 141
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 40.3 bits (93), Expect = 2e-04
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 1/95 (1%)
Query: 39 TVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNN 98
T+ V++G+ GK+ I + L L + + + K + E P
Sbjct: 3 TLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFN-VGQYRRDMVKTYKSFEFFLPDNEE 61
Query: 99 INRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNR 133
+I Q + L V + + + N
Sbjct: 62 GLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNT 96
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 40.3 bits (93), Expect = 2e-04
Identities = 22/183 (12%), Positives = 49/183 (26%), Gaps = 20/183 (10%)
Query: 34 EGSPSTVFVIMGVSGSGKSTIGESLATRLGVKFID-GDHLHPQSNIDKMSAKQPLNDEDR 92
E S V ++G GSGK T ++ G + GD L + +
Sbjct: 2 EKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKN 61
Query: 93 RP----WLNNINRIIHQLNVDNLTGVLVCSALRRNYRD-----IIRNNNRVVFIYLKAEF 143
+ ++ + + + ++
Sbjct: 62 GEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPE 121
Query: 144 GVILSRLQKRAEHFMPADLLESQFQT-----LEEPDPLVE-----PDVRTVSVNEPLEGI 193
V+ RL KR E +D + + +++ V+ + N + +
Sbjct: 122 EVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEV 181
Query: 194 VSK 196
+
Sbjct: 182 YND 184
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 39.9 bits (92), Expect = 2e-04
Identities = 11/72 (15%), Positives = 23/72 (31%)
Query: 36 SPSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPW 95
+ +I G SGK T E + T+ + I L + + +
Sbjct: 1 ADPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQ 60
Query: 96 LNNINRIIHQLN 107
L +++ +
Sbjct: 61 LVPDEIVVNMVK 72
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 39.5 bits (91), Expect = 3e-04
Identities = 12/67 (17%), Positives = 26/67 (38%)
Query: 38 STVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLN 97
S + ++G GSGK T E + + G + L + + L++ + L
Sbjct: 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLV 67
Query: 98 NINRIIH 104
+ ++
Sbjct: 68 PLETVLD 74
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 39.4 bits (91), Expect = 3e-04
Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 6/123 (4%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFID-GDHLHPQSNIDKMSAKQPLNDEDRRPWLNN-- 98
IMG GSGK T+ + +K + GD L D+ + +
Sbjct: 10 AIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDDV 69
Query: 99 -INRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVF--IYLKAEFGVILSRLQKRAE 155
++H+L L+ R + + + I L F VI RL R E
Sbjct: 70 MTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTDRPE 129
Query: 156 HFM 158
+
Sbjct: 130 TVV 132
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 38.4 bits (88), Expect = 7e-04
Identities = 9/69 (13%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINR 101
+++G +GK T + + + G+ I + + + D L +
Sbjct: 4 ILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVT-DE 62
Query: 102 IIHQLNVDN 110
++ L +
Sbjct: 63 LVIALVKER 71
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 37.9 bits (87), Expect = 8e-04
Identities = 25/171 (14%), Positives = 50/171 (29%), Gaps = 18/171 (10%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFID-GDHLHPQSN---------IDKMSAKQPLNDED 91
V+MG+ G+GK T + + + G I GD M + DE
Sbjct: 4 VLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPDEV 63
Query: 92 RRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQ 151
+ N L G ++ + R I V L
Sbjct: 64 TIGIVRERLSKSDCDNGFLLDGFPRTVPQAEALDQLLADMGRK--IEHVLNIQVEKEELI 121
Query: 152 KRAEHFMPADLLESQFQT-LEEPDPLVE-----PDVRTVSVNEPLEGIVSK 196
R D + ++ + + + PL+ + ++ + ++ +
Sbjct: 122 ARLTADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIKDVFKD 172
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 38.1 bits (87), Expect = 8e-04
Identities = 21/153 (13%), Positives = 45/153 (29%), Gaps = 20/153 (13%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWL--- 96
+ ++ G+ G GKST+ + L + I+ ++ + + K +
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSV 62
Query: 97 --------NNINRIIHQLNVDNLTGVLVCSALR---------RNYRDIIRNNNRVVFIYL 139
+ I + + + + +I N V L
Sbjct: 63 EKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLL 122
Query: 140 KAEFGVILSRLQKRAEHFMPADLLESQFQTLEE 172
+A+ +ILSR ++ ES
Sbjct: 123 EADPKIILSRQKRDTTRNRNDYSDESVILETIN 155
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 38.3 bits (89), Expect = 0.001
Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 15/160 (9%)
Query: 40 VFVIMGVSGSGKSTIGESLATRL-----GVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRP 94
V I+G SGSGKST + L G ++G +++ DK + + R
Sbjct: 30 VISIIGSSGSGKSTFLRCIN-FLEKPSEGAIIVNGQNINLVR--DKDGQLKVADKNQLRL 86
Query: 95 WLNNINRIIHQLN-VDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKR 153
+ + N ++T + + +++ R + A+ G + +R
Sbjct: 87 LRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVG-----IDER 141
Query: 154 AEHFMPADLLESQFQTLEEPDPLVEPDVRTVSVNEPLEGI 193
A+ P L Q Q + L + + +EP +
Sbjct: 142 AQGKYPVHLSGGQQQRVSIARALA-MEPDVLLFDEPTSAL 180
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 37.6 bits (86), Expect = 0.001
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINR 101
V++G G+GK T LA V + + + S +
Sbjct: 7 VLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRA-MVASGSELGKKLKATMDAGKLVSDE 65
Query: 102 IIHQ 105
++ +
Sbjct: 66 MVLE 69
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 37.3 bits (85), Expect = 0.002
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFID 68
V I G SG+GK T+ +++A L +D
Sbjct: 5 VITIDGPSGAGKGTLCKAMAEALQWHLLD 33
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 37.4 bits (86), Expect = 0.002
Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 17/161 (10%)
Query: 40 VFVIMGVSGSGKSTIGESLATRL----GVKFIDGDHLHPQSNIDKMSAKQPLN----DED 91
F I+G SG+GK+T +A G + D + + + +
Sbjct: 33 RFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWA 92
Query: 92 RRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVI-LSRL 150
P L I L ++ + R + +++ I+ LS
Sbjct: 93 LYPNLTAFENIAFPLTNMKMS--------KEEIRKRVEEVAKILDIHHVLNHFPRELSGA 144
Query: 151 QKRAEHFMPADLLESQFQTLEEPDPLVEPDVRTVSVNEPLE 191
Q++ A + + L+EP ++ +R + E
Sbjct: 145 QQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKE 185
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 36.3 bits (83), Expect = 0.004
Identities = 29/176 (16%), Positives = 50/176 (28%), Gaps = 16/176 (9%)
Query: 35 GSPSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRP 94
+ G+S SGKST+ L +L V+ + + + L
Sbjct: 21 NQRGLTIWLTGLSASGKSTLAVELEHQL-VRDRRVHAYRLDGDNIRFGLNKDL-GFSEAD 78
Query: 95 WLNNINRIIHQL---NVDNLTGVLVCSALRRNYRDIIR-----------NNNRVVFIYLK 140
NI RI N + + R RD R V +Y+
Sbjct: 79 RNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVD 138
Query: 141 AEFGVILSRLQKRAEHFMPADLLESQFQTLEEPDPLVEPDVRTVSVNEPLEGIVSK 196
V R K +++ + P+V + P++ V +
Sbjct: 139 VPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQ 194
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 36.1 bits (82), Expect = 0.004
Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 17/145 (11%)
Query: 38 STVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHL-----------HPQSNIDKMSAKQP 86
+ V V+ GV G G +T + L + ++ + D+ ++
Sbjct: 1 NKVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKM 60
Query: 87 LNDEDRRPWLNNINRIIHQLNVDNL---TGVLVCSA---LRRNYRDIIRNNNRVVFIYLK 140
+ +R +I + T V + L ++ N + I ++
Sbjct: 61 DPETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVVE 120
Query: 141 AEFGVILSRLQKRAEHFMPADLLES 165
IL R D +
Sbjct: 121 TTGDEILMRRMSDETRVRDLDTAST 145
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 36.2 bits (82), Expect = 0.004
Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGD---HLHPQSNIDKMSAKQPLNDEDRRPWLNN 98
I+G SGKS + LA + + D+ + + +
Sbjct: 11 AILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQRY 70
Query: 99 INRIIHQ 105
I+ +
Sbjct: 71 IDYAVRH 77
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 34.9 bits (79), Expect = 0.009
Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFID-GDHLHPQSNIDKMSAKQPLNDEDRRPWLNN 98
V ++G G+GK T + + G + G+ L + + + + +
Sbjct: 3 VVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVP 62
Query: 99 INRIIHQLN 107
+ I L
Sbjct: 63 VEITISLLK 71
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 34.6 bits (78), Expect = 0.011
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 40 VFVIMGVSGSGKSTIGESLATRL---GVKFIDGDHLH 73
+ SG+GK+T+ + L L G++ H H
Sbjct: 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTH 40
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 34.8 bits (80), Expect = 0.011
Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 7/122 (5%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRL-----GVKFIDGDHLHPQSNIDKMSAKQPLNDED 91
P+++ G SG GKSTI L R G IDG + +++ ++ +D
Sbjct: 27 PNSIIAFAGPSGGGKSTIFSLLE-RFYQPTAGEITIDGQPID-NISLENWRSQIGFVSQD 84
Query: 92 RRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQ 151
I + + T + L + N E GV +S Q
Sbjct: 85 SAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQ 144
Query: 152 KR 153
++
Sbjct: 145 RQ 146
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 33.6 bits (75), Expect = 0.035
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLG 63
+ +I+G +GSGKS++ +++ L
Sbjct: 25 INLIIGQNGSGKSSLLDAILVGLY 48
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 33.4 bits (76), Expect = 0.036
Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 7/68 (10%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNI 99
+++G SG GK+T +A G++ ++ I P P +I
Sbjct: 31 FMILLGPSGCGKTTTLRMIA---GLEEPSRGQIY----IGDKLVADPEKGIFVPPKDRDI 83
Query: 100 NRIIHQLN 107
+
Sbjct: 84 AMVFQSYA 91
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 32.6 bits (74), Expect = 0.058
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 26 TTTLSP-SGEGSPSTVFVIMGVSGSGKSTIGESLATRL---GVKFIDGDHLHPQSNIDKM 81
+T L P SGE + ++G +G+GKST+ +A G G L S
Sbjct: 12 STRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLA 71
Query: 82 SAKQPLNDEDRRPWLNNINRIIHQ 105
+ L+ + P+ + +
Sbjct: 72 LHRAYLSQQQTPPFATPVWHYLTL 95
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 33.0 bits (74), Expect = 0.061
Identities = 17/148 (11%), Positives = 35/148 (23%), Gaps = 10/148 (6%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRLGVKF--IDGD----HLHPQSNIDKMSAKQPLNDE 90
T F++ G GSGK+++ ++ ID D + K+ K +
Sbjct: 31 SPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHV 90
Query: 91 DRRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIR----NNNRVVFIYLKAEFGVI 146
I + + +
Sbjct: 91 TPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINS 150
Query: 147 LSRLQKRAEHFMPADLLESQFQTLEEPD 174
+R E D + ++ + D
Sbjct: 151 YLGTIERYETMYADDPMTARATPKQAHD 178
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 32.6 bits (73), Expect = 0.068
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 1/93 (1%)
Query: 43 IMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINRI 102
+ G + SGKS++ + LG +D + + S + L E + L
Sbjct: 7 VSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVV-ILSQDSFYRVLTSEQKAKALKGQFNF 65
Query: 103 IHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVV 135
H DN + + I + V
Sbjct: 66 DHPDAFDNELILKTLKEITEGKTVQIPVYDFVS 98
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 32.4 bits (72), Expect = 0.068
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 43 IMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPW 95
I G+S SGK+T+ L+ L + I H +I + + + +E+ +
Sbjct: 27 IDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWFEY 79
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 32.7 bits (73), Expect = 0.069
Identities = 10/57 (17%), Positives = 18/57 (31%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNN 98
I G GKST + L + + + NI ++ + L+
Sbjct: 6 SIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLDM 62
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 32.2 bits (73), Expect = 0.079
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 40 VFVIMGVSGSGKSTIGESLA 59
V +G SG GKST+ +A
Sbjct: 28 FVVFVGPSGCGKSTLLRMIA 47
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 32.3 bits (73), Expect = 0.082
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 40 VFVIMGVSGSGKSTIGESLA 59
FVI+G +G+GK+ E +A
Sbjct: 28 YFVILGPTGAGKTLFLELIA 47
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 32.3 bits (73), Expect = 0.091
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 40 VFVIMGVSGSGKSTIGESLA 59
V++G +G+GKS E +A
Sbjct: 26 YCVLLGPTGAGKSVFLELIA 45
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 31.4 bits (70), Expect = 0.12
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 40 VFVIMGVSGSGKSTIGESLATRL 62
V+ ++G SGK+T+ E
Sbjct: 3 VWQVVGYKHSGKTTLMEKWVAAA 25
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 31.9 bits (71), Expect = 0.14
Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 20/124 (16%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVK-------------FIDGDHLHPQSNIDKMSAKQP 86
V I+G +GSGKS I +++ G + G P + +
Sbjct: 26 VTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASEKFDMIFAGSENLPPAGSAYVELVFE 85
Query: 87 LNDED----RRPWLNNINRIIHQ---LNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYL 139
N E+ R N + + ++ + L ++ I+ +
Sbjct: 86 ENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTGLGVDFYSIVGQGQIDRIVNA 145
Query: 140 KAEF 143
E
Sbjct: 146 SPEE 149
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 31.1 bits (69), Expect = 0.17
Identities = 17/123 (13%), Positives = 30/123 (24%), Gaps = 6/123 (4%)
Query: 40 VFVIMGVSGSGKSTIGESLATRL-GVKFIDGDHLHPQS-----NIDKMSAKQPLNDEDRR 93
V V+ G S GKST+ L R+ + F +D +
Sbjct: 4 VVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLID 63
Query: 94 PWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKR 153
IH + T A ++ + +K ++
Sbjct: 64 QGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAP 123
Query: 154 AEH 156
Sbjct: 124 PSW 126
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022,
N-terminal domain {Pyrococcus horikoshii [TaxId:
53953]}
Length = 239
Score = 31.3 bits (71), Expect = 0.18
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 40 VFVIMGVSGSGKSTIGESLA 59
V++G SG GK+T +A
Sbjct: 34 FLVLLGPSGCGKTTTLRMIA 53
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 31.3 bits (69), Expect = 0.19
Identities = 11/67 (16%), Positives = 27/67 (40%)
Query: 20 VVTLIMTTTLSPSGEGSPSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNID 79
+ + + LS +G + ++ +G G GK+T+ + R+ Q+ ++
Sbjct: 28 LARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVN 87
Query: 80 KMSAKQP 86
+A
Sbjct: 88 AFNAPNL 94
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 30.7 bits (69), Expect = 0.25
Identities = 22/159 (13%), Positives = 48/159 (30%), Gaps = 24/159 (15%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWL 96
V I+G SGSGKST+ + + + N + L D
Sbjct: 28 QGEVIGIVGRSGSGKSTLTKLIQ-----------RFYIPENGQVLIDGHDLALADPNWLR 76
Query: 97 NNINRIIHQLNVDNLTG-VLVCSALRRNYRDIIRNNNRVVFIY------------LKAEF 143
+ ++ + N + + A + + ++ + + E
Sbjct: 77 RQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQ 136
Query: 144 GVILSRLQKRAEHFMPADLLESQFQTLEEPDPLVEPDVR 182
G LS Q++ A + + +E ++ +
Sbjct: 137 GAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESE 175
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 30.7 bits (69), Expect = 0.28
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 40 VFVIMGVSGSGKSTIGESLA 59
V +I+G +GSGKST+ +
Sbjct: 32 VTLIIGPNGSGKSTLINVIT 51
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 30.4 bits (67), Expect = 0.30
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 30 SPSGEGSPSTVFVIMGVSGSGKSTIGESLATRLGVKFI 67
+ EG+ +I G GSGK+T +
Sbjct: 1 TKYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 30.3 bits (68), Expect = 0.33
Identities = 9/42 (21%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 40 VFVIMGVSGSGKSTIGESLATRL----GVKFIDGDHLHPQSN 77
+F ++G +G+GK+T ++T + G+ + G ++ + +
Sbjct: 30 IFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPH 71
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 30.5 bits (69), Expect = 0.34
Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 21/81 (25%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRL-----GVKFIDGDHLHPQSNIDKMSAKQPLNDED 91
+G+SG GKST+ + R G IDG + D
Sbjct: 43 KGETVAFVGMSGGGKSTLINLIP-RFYDVTSGQILIDG---------------HNIKDFL 86
Query: 92 RRPWLNNINRIIHQLNVDNLT 112
N I + + + T
Sbjct: 87 TGSLRNQIGLVQQDNILFSDT 107
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 30.1 bits (66), Expect = 0.36
Identities = 18/113 (15%), Positives = 33/113 (29%), Gaps = 7/113 (6%)
Query: 39 TVFVIMGVSGSGKSTIGESLATRLG-----VKFIDGDHLHPQSNIDKMSAKQPLNDEDRR 93
T+ V G G+GK+TI +L L V +D D +N++ + + L +
Sbjct: 3 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD--ITMANLELILGMEGLPVTLQN 60
Query: 94 PWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVI 146
V+ R V + ++
Sbjct: 61 VLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKANPEKLEDVLTQIMESTDIL 113
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 29.9 bits (66), Expect = 0.38
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 43 IMGVSGSGKSTIGESLATRLGVKFIDGDHL 72
I G GSGKST+ L G +D D L
Sbjct: 8 ITGNIGSGKSTVAALLR-SWGYPVLDLDAL 36
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 30.6 bits (67), Expect = 0.39
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLG 63
+ +I+G +GSGKS++ +++ L
Sbjct: 25 INLIIGQNGSGKSSLLDAILVGLY 48
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 30.3 bits (68), Expect = 0.41
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 40 VFVIMGVSGSGKSTIGESLA 59
+ ++G +G+GK+T ++A
Sbjct: 34 IVTLIGANGAGKTTTLSAIA 53
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 29.8 bits (66), Expect = 0.43
Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 8/133 (6%)
Query: 43 IMGVSGSGKSTIGESLATRLGVKFIDGDH-----LHPQSNIDKMSAKQPLNDEDRRPWLN 97
+ G GSGK+TI LGV +D D + S + +
Sbjct: 7 LTGGIGSGKTTIANLFT-DLGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQIL--TEQG 63
Query: 98 NINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEHF 157
+NR + V N + + R ++ V+ ++ +
Sbjct: 64 ELNRAALRERVFNHDEDKLWLNNLLHPAIRERMKQKLAEQTAPYTLFVVPLLIENKLTAL 123
Query: 158 MPADLLESQFQTL 170
L+
Sbjct: 124 CDRILVVDVSPQT 136
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 30.4 bits (68), Expect = 0.45
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Query: 41 FVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLND 89
++ G SGK+T+ +L G K ++ + D
Sbjct: 157 WLFKGPIDSGKTTLAAALLELCGGKALNVNL----PLDRLNFELGVAID 201
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 29.9 bits (66), Expect = 0.48
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 43 IMGVSGSGKSTIGESLATRLGVKFID 68
+ GV SGK T + + +
Sbjct: 6 LSGVKRSGKDTTADFIMSNYSAVKYQ 31
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 30.0 bits (66), Expect = 0.52
Identities = 14/98 (14%), Positives = 26/98 (26%), Gaps = 8/98 (8%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFIDG--------DHLHPQSNIDKMSAKQPLNDED 91
+ V +G +GSGK+T+ L + L + +ID
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMR 61
Query: 92 RRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIR 129
N + ++ L D +
Sbjct: 62 EGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVL 99
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 29.8 bits (66), Expect = 0.54
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFIDGDHL 72
+ + G GSGKST+ + A LG+ ID D +
Sbjct: 5 IVALTGGIGSGKSTVANAFA-DLGINVIDADII 36
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 30.1 bits (66), Expect = 0.56
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 27 TTLSPSGEGSPSTVFVIMGVSGSGKSTIGESLATRLGVK 65
T + I+G +GSGKS + ++++ LGV+
Sbjct: 18 TKVGFGESN----FTSIIGPNGSGKSNMMDAISFVLGVR 52
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC
transporter MsbA, C-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 253
Score = 29.8 bits (67), Expect = 0.57
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLA 59
++G SGSGKSTI +
Sbjct: 40 AGKTVALVGRSGSGKSTIASLIT 62
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 29.9 bits (67), Expect = 0.57
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 40 VFVIMGVSGSGKSTIGESLATRL----GVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPW 95
++ ++G SG+GKST+ + G +DG L S + A++ + +
Sbjct: 33 IYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFN 92
Query: 96 LNNINRIIHQL 106
L + + +
Sbjct: 93 LLSSRTVFGNV 103
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 29.5 bits (66), Expect = 0.62
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLA 59
+ I G +GSGK+++ +
Sbjct: 61 KGEMLAITGSTGSGKTSLLMLIL 83
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 29.1 bits (65), Expect = 0.65
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHL 72
++ G SG GKS L + F+ D +
Sbjct: 19 LLTGRSGIGKSECALDLINK-NHLFVGDDAI 48
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 29.1 bits (65), Expect = 0.80
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLA 59
P V ++G +GSGKST+ L
Sbjct: 39 PGEVTALVGPNGSGKSTVAALLQ 61
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 29.0 bits (65), Expect = 0.83
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 40 VFVIMGVSGSGKSTI 54
IMG SGSGKST+
Sbjct: 33 FVSIMGPSGSGKSTM 47
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895
{Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 29.1 bits (65), Expect = 0.83
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 40 VFVIMGVSGSGKSTIGESLA 59
V G +G GK+T+ ++++
Sbjct: 29 VVNFHGPNGIGKTTLLKTIS 48
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 29.1 bits (65), Expect = 0.86
Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 5/58 (8%)
Query: 43 IMGVSGSGKSTIGESLATRLG-----VKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPW 95
+ G SG+G ST+ + I+GD H + D + +
Sbjct: 9 VTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAAGDATF 66
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 29.2 bits (64), Expect = 0.86
Identities = 18/105 (17%), Positives = 31/105 (29%), Gaps = 1/105 (0%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNI 99
I+G +GSGKS IG+++ LG S++ +K + +
Sbjct: 28 FTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASRISDLIFAGSKNEPPAKYAEVAIYFN 87
Query: 100 NRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFG 144
N +D V+ N R +
Sbjct: 88 NE-DRGFPIDEDEVVIRRRVYPDGRSSYWLNGRRATRSEILDILT 131
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 28.7 bits (63), Expect = 0.92
Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 10/98 (10%)
Query: 41 FVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNIN 100
+ +G SG GK+T KF + + ++ + + P ++
Sbjct: 8 LLALGDSGVGKTTFLYRYTDN---KFNP----KFITTVGIDFREKRVVYNAQGPNGSSGK 60
Query: 101 RIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIY 138
L + + G +L + R+ + ++
Sbjct: 61 AFKVHLQLWDTAGQERFRSLTTAF---FRDAMGFLLMF 95
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 28.9 bits (64), Expect = 0.98
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 34 EGSPSTVFVIMGVSGSGKSTIGESLATRL 62
EG V +++GV+G GK+T LA +
Sbjct: 5 EGKAPFVILMVGVNGVGKTTTIGKLARQF 33
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 29.2 bits (65), Expect = 0.99
Identities = 13/110 (11%), Positives = 28/110 (25%), Gaps = 6/110 (5%)
Query: 58 LATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNINRIIHQLNVDNLTGVLVC 117
+ H+ ++ DR P + + + ++T V
Sbjct: 84 GMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALLCYPAARYLMGSMTPQAV- 142
Query: 118 SALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEHF--MPADLLES 165
A + N + + RL KR + +L +
Sbjct: 143 LAFVALIPPTLPGTN---IVLGALPEDRHIDRLAKRQRPGERLDLAMLAA 189
Score = 27.3 bits (60), Expect = 3.4
Identities = 8/26 (30%), Positives = 10/26 (38%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFI 67
I G G GK+T + L I
Sbjct: 8 YIDGPHGMGKTTTTQLLVALGSRDDI 33
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 28.8 bits (63), Expect = 1.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKF 66
V+ G SG+GKST+ + L F
Sbjct: 4 VLSGPSGAGKSTLLKKLFQEHSSIF 28
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 28.9 bits (63), Expect = 1.0
Identities = 33/267 (12%), Positives = 83/267 (31%), Gaps = 23/267 (8%)
Query: 34 EGSPSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRR 93
+G + + +++G+ +GKS+I + L + +I D + + + E ++
Sbjct: 25 KGLRAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNY--ISYKDFLLELQK 82
Query: 94 PWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKR 153
+ R+ L +V + ++ F +L ++
Sbjct: 83 EINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLS---------FANLLESFEQA 133
Query: 154 AEHFMPADLLESQFQTLEEPDPLVEPDVRTVSVNEPLEGIVSKSAIMPPTRAPPNYSDFV 213
++ + L E+Q L+ + ++ I+S S +
Sbjct: 134 SKDNVIIVLDEAQELVKLRGVNLLPALAYAYDNLKRIKFIMSGSEMGLLYDYL---RVED 190
Query: 214 CVDDFEQFALKVLRIRPRVMRDLSKRTLVTDALGHPVQIPIGVSPAAMQKLAHEEGEIGN 273
A + ++P + + L Q + + + + G G
Sbjct: 191 PESPLFGRAFSTVELKPFSREE------AIEFLRRGFQEA-DIDFKDYEVVYEKIG--GI 241
Query: 274 AAAVGEVGGIYILSTISTTSIEELAEK 300
+ G IY+ + +I + E
Sbjct: 242 PGWLTYFGFIYLDNKNLDFAINQTLEY 268
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 28.4 bits (63), Expect = 1.0
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLH 73
+I G SG GKS L R G + + D++
Sbjct: 19 LITGDSGIGKSETALELIKR-GHRLVADDNVE 49
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 28.7 bits (63), Expect = 1.1
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 41 FVIMGVSGSGKSTIGESLATRLGVKF 66
V++G G G+ I +L T+ +F
Sbjct: 6 LVLLGAHGVGRRHIKNTLITKHPDRF 31
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 28.8 bits (63), Expect = 1.2
Identities = 9/67 (13%), Positives = 18/67 (26%), Gaps = 3/67 (4%)
Query: 42 VIMGVSGSGKSTIGESLATRL---GVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNN 98
I G +GKST L V + + ++ ++ L
Sbjct: 6 SIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQM 65
Query: 99 INRIIHQ 105
+ +
Sbjct: 66 MYEKPER 72
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 122
Score = 27.8 bits (62), Expect = 1.2
Identities = 3/39 (7%), Positives = 11/39 (28%), Gaps = 7/39 (17%)
Query: 40 VFVIMGVSGSGKSTIGESLATRL-------GVKFIDGDH 71
V+ + + +L + K + ++
Sbjct: 8 SIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHNN 46
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 28.4 bits (62), Expect = 1.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKF 66
VI G SG+GKST+ + L F
Sbjct: 5 VISGPSGTGKSTLLKKLFAEYPDSF 29
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 29.0 bits (64), Expect = 1.3
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 32 SGEGSPSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGD 70
E +P + +++G +G GK+ I LA FI +
Sbjct: 44 RHEVTPKNI-LMIGPTGVGKTEIARRLAKLANAPFIKVE 81
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 28.6 bits (62), Expect = 1.4
Identities = 10/57 (17%), Positives = 18/57 (31%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRR 93
++ + G +GK+ I +LA + G ID +P
Sbjct: 22 TGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVA 78
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 28.3 bits (62), Expect = 1.5
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 39 TVFVIMGVSGSGKSTI 54
T++++ SG+GKS++
Sbjct: 3 TLYIVSAPSGAGKSSL 18
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 28.1 bits (61), Expect = 1.5
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFID 68
I GV G+GK T+ E L+
Sbjct: 4 AIEGVDGAGKRTLVEKLSGAFRAAGRS 30
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 28.4 bits (63), Expect = 1.6
Identities = 6/27 (22%), Positives = 9/27 (33%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFID 68
+ G G GK+T E +
Sbjct: 9 YLDGAYGIGKTTAAEEFLHHFAITPNR 35
Score = 26.5 bits (58), Expect = 7.3
Identities = 6/33 (18%), Positives = 10/33 (30%), Gaps = 2/33 (6%)
Query: 135 VFIYLKAEFGVILSRLQKRAEHF--MPADLLES 165
+ LSR+ KRA + +
Sbjct: 162 NLVVCTVSLPSHLSRVSKRARPGETVNLPFVMV 194
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 28.0 bits (61), Expect = 1.9
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFI 67
+I G+ +GK+T L +L
Sbjct: 7 LIEGLDRTGKTTQCNILYKKLQPNCK 32
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 28.0 bits (61), Expect = 2.0
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFID 68
V+ GV +GKST L L
Sbjct: 7 VLEGVDRAGKSTQSRKLVEALCAAGHR 33
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 28.0 bits (61), Expect = 2.1
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
Query: 36 SPSTVFVIMGVSGSGKSTIGESLATRLG-----VKFIDGDHLHPQSNIDKMSAKQPLNDE 90
+ G G GK++I + A RL V + D P SN+ ++ ++ N
Sbjct: 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD---PASNVGQVFSQTIGNTI 62
Query: 91 DRRPWLNN 98
+
Sbjct: 63 QAIASVPG 70
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 27.6 bits (60), Expect = 2.3
Identities = 18/136 (13%), Positives = 34/136 (25%), Gaps = 11/136 (8%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLH--PQSNIDKMSAKQPLNDEDRRPWLNNI 99
VI G+ G+GK+T + L I P + L D
Sbjct: 6 VIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVIT 65
Query: 100 NRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEHFMP 159
++ + +A + +I+ + + Q
Sbjct: 66 DKAEVLMF---------YAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQ 116
Query: 160 ADLLESQFQTLEEPDP 175
L + L + P
Sbjct: 117 HMLATLRDAVLGDFRP 132
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia
coli [TaxId: 562]}
Length = 222
Score = 27.7 bits (60), Expect = 2.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLG 63
V + G +G+GKST + T L
Sbjct: 26 VTTLSGGNGAGKSTTMAAFVTALI 49
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 27.6 bits (61), Expect = 2.6
Identities = 5/33 (15%), Positives = 11/33 (33%), Gaps = 2/33 (6%)
Query: 135 VFIYLKAEFGVILSRLQKRAEHF--MPADLLES 165
+ + RL+ RA + L+ +
Sbjct: 159 NIVVTTLNVEEHIRRLRTRARIGEQIDITLIAT 191
Score = 26.9 bits (59), Expect = 4.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVK 65
+ GV G GKST G +A+
Sbjct: 10 YLDGVYGIGKSTTGRVMASAASGG 33
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 27.4 bits (60), Expect = 2.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 36 SPSTVFVIMGVSGSGKSTIGESLATRL 62
P V +++GV+G+GK+T LA
Sbjct: 9 EPPFVIMVVGVNGTGKTTSCGKLAKMF 35
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 27.3 bits (59), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 42 VIMGVSGSGKSTIGESLATRL 62
+I G G GK+T+ + + RL
Sbjct: 4 IITGEPGVGKTTLVKKIVERL 24
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 27.7 bits (60), Expect = 3.0
Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 8/111 (7%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRL--GVKFIDGDHLHPQSNIDKM------SAKQPLN 88
TV ++ G+GKS + LA ++ G ++ L I + L+
Sbjct: 28 AGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLH 87
Query: 89 DEDRRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYL 139
+ L + L G L + + R + L
Sbjct: 88 ALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVL 138
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 26.9 bits (58), Expect = 3.4
Identities = 14/114 (12%), Positives = 30/114 (26%), Gaps = 10/114 (8%)
Query: 35 GSPSTV-FVIMGVSGSGKSTIGESLATR-------LGVKFIDGDHLHPQSNIDKMSAKQP 86
GSP + V++G GK+ + S T V ++ +
Sbjct: 1 GSPQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 60
Query: 87 LNDEDRRPWLNNINRIIHQ--LNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIY 138
ED + ++ + + Y ++ + I
Sbjct: 61 AGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIIL 114
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 27.0 bits (58), Expect = 3.5
Identities = 11/65 (16%), Positives = 17/65 (26%)
Query: 41 FVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLNNIN 100
I G GK+T+ + L D + I E+ R L +
Sbjct: 8 LGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITLVDAP 67
Query: 101 RIIHQ 105
Sbjct: 68 GHADL 72
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 27.0 bits (59), Expect = 3.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRL 62
V +++GV G+GK+T LA
Sbjct: 11 IPYVIMLVGVQGTGKATTAGKLAYFY 36
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 27.1 bits (59), Expect = 3.8
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 43 IMGVSGSGKSTIGESLATRL-----GVKFIDGDHLHPQSN 77
+ G G+GKST E+ L V I D P +
Sbjct: 59 VTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTG 98
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 27.3 bits (59), Expect = 3.8
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Query: 40 VFVIMGVSGSGKSTIGESLATRLG-----VKFIDGDHLHPQSNIDKM 81
+ ++MG G GK+T+ ++A RL V D P +++
Sbjct: 22 LIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD---PAAHLSMT 65
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 27.1 bits (59), Expect = 3.8
Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 24/133 (18%)
Query: 43 IMGVSGSGKSTIGESLATRLGVKFIDG---------DHLHPQSNIDKMSAKQPLNDEDRR 93
G GSGKS + L K+ D + K++ + N +
Sbjct: 32 FSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQG 91
Query: 94 ---PWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRL 150
P +++ + V + + N ++ + Y K++F R
Sbjct: 92 RGLPGTHDMKLLQE-----------VLNTIFNNNEHPDQDTVVLP-KYDKSQFKGEGDRC 139
Query: 151 QKRAEHFMPADLL 163
+ +P D+
Sbjct: 140 PTGQKIKLPVDIF 152
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 26.5 bits (57), Expect = 4.6
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 38 STVFVIMGVSGSGKSTIGESLATRL 62
+ + G G GK+T+ + L
Sbjct: 1 ARHVFLTGPPGVGKTTLIHKASEVL 25
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Length = 364
Score = 27.1 bits (59), Expect = 4.7
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDH 71
+ +++G +GSGK+ + ++LA L + D
Sbjct: 67 SKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDA 101
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId:
271]}
Length = 207
Score = 26.6 bits (58), Expect = 4.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 39 TVFVIMGVSGSGKSTIGESLATRL 62
++ ++G+ GSGK+T LA
Sbjct: 11 NLWFLVGLQGSGKTTTAAKLALYY 34
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 26.7 bits (57), Expect = 4.9
Identities = 8/76 (10%), Positives = 23/76 (30%), Gaps = 4/76 (5%)
Query: 35 GSPSTVFVIMGVSGSGKSTI----GESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDE 90
G ++G G+GK+ E + +F+ + ++ + +
Sbjct: 40 GHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNI 99
Query: 91 DRRPWLNNINRIIHQL 106
+ + + L
Sbjct: 100 PFPRRGLSRDEFLALL 115
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 26.8 bits (58), Expect = 4.9
Identities = 7/91 (7%), Positives = 22/91 (24%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWL 96
++ + G +G+GK+ + + + ++ D
Sbjct: 25 KDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEME 84
Query: 97 NNINRIIHQLNVDNLTGVLVCSALRRNYRDI 127
I ++ ++ D
Sbjct: 85 RQNLLKIVCAYPESAGLEDHLQIIKSEINDF 115
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 26.4 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 42 VIMGVSGSGKSTIGESLATRLGVKFIDGDHLH 73
+I G SG GKS L R G + I D +
Sbjct: 18 LITGDSGVGKSETALELVQR-GHRLIADDRVD 48
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 26.6 bits (57), Expect = 5.0
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 42 VIMGVSGSGKSTIGESLATRLG-----VKFIDGDHLHPQSNIDKM--SAKQPLNDEDRRP 94
++ G G+GK+T+ +L+ LG V +DGD +N+ + + D
Sbjct: 7 IVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD--LTMANLSLVLGVDDPDVTLHDVLA 64
Query: 95 WLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVIL 147
N+ I+ DN+ + + R V+ LK +F IL
Sbjct: 65 GEANVEDAIYMTQFDNVYVLPGAVDWEHVLKADPRKLPEVIK-SLKDKFDFIL 116
>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage
Mu [TaxId: 10677]}
Length = 94
Score = 25.5 bits (56), Expect = 5.2
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 346 RYADIRNKFNMPSHLNIEELAEKTPQTTKWFQLYIYRDREI 386
R I N FN N+ EL + T I R R +
Sbjct: 56 RDLRIWNDFN---GRNVSELTTRYGVTFNTVYKAIRRMRRL 93
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 27.0 bits (59), Expect = 5.5
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 8/126 (6%)
Query: 42 VIMGVSGSGKST----IGESLATRLGVKFIDGDHLHPQSNIDKMSAKQPLNDEDRRPWLN 97
+I G SG+GK+ + + LA+ G +G + Q + + + + N
Sbjct: 129 LITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNA-KTTRNN 187
Query: 98 NINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFGVILSRLQKRAEHF 157
N +R + + + A ++Y +RVVF I +L A
Sbjct: 188 NSSRFGKFIEIQFNNAGFISGASIQSYLL---EKSRVVFQSETERNYHIFYQLLAGATAE 244
Query: 158 MPADLL 163
L
Sbjct: 245 EKKALH 250
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 26.2 bits (57), Expect = 6.5
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 34 EGSPSTVFVIMGVSGSGKSTIGESLATRL 62
E V +++GV+G GK+T L
Sbjct: 3 EPKG-RVVLVVGVNGVGKTTTIAKLGRYY 30
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Trypanosoma cruzi [TaxId: 5693]}
Length = 323
Score = 26.5 bits (58), Expect = 6.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 34 EGSPSTVFVIMGVSGSGKSTI 54
G V V G+SG+GK+T+
Sbjct: 10 VGKQGDVTVFFGLSGTGKTTL 30
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 26.6 bits (57), Expect = 6.7
Identities = 14/113 (12%), Positives = 29/113 (25%), Gaps = 21/113 (18%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRL---------------------GVKFIDGDHLHPQ 75
+V GV GSGK+ I L +ID +
Sbjct: 33 SQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRP 92
Query: 76 SNIDKMSAKQPLNDEDRRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDII 128
I +M+ ++ + + + + N + ++
Sbjct: 93 ERIMQMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVV 145
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase,
BchI {Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 26.4 bits (57), Expect = 6.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 42 VIMGVSGSGKSTIGESLATRL 62
++ G G+GKST +LA L
Sbjct: 32 LVFGDRGTGKSTAVRALAALL 52
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Escherichia coli [TaxId: 562]}
Length = 313
Score = 26.1 bits (57), Expect = 7.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 34 EGSPSTVFVIMGVSGSGKSTI 54
G V V G+SG+GK+T+
Sbjct: 10 VGEKGDVAVFFGLSGTGKTTL 30
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 25.9 bits (56), Expect = 8.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 42 VIMGVSGSGKSTIGESLATR 61
++MG G GKS+ S+
Sbjct: 36 LVMGKGGVGKSSTVNSIIGE 55
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 26.2 bits (56), Expect = 8.7
Identities = 10/80 (12%), Positives = 26/80 (32%), Gaps = 11/80 (13%)
Query: 37 PSTVFVIMGVSGSGKSTIGESLATRLGVK-----------FIDGDHLHPQSNIDKMSAKQ 85
++ + G +GKS + +LA + +ID + + ++ +
Sbjct: 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRF 92
Query: 86 PLNDEDRRPWLNNINRIIHQ 105
L+ +D +
Sbjct: 93 GLDPDDALNNVAYARAYNAD 112
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 25.9 bits (56), Expect = 9.5
Identities = 20/138 (14%), Positives = 35/138 (25%), Gaps = 10/138 (7%)
Query: 33 GEGSPSTVFVIMGVSGSGKSTIGESL---ATRLGVKFIDG----DHLHPQSNIDKMSAKQ 85
S + G +GSGKS I + +L D
Sbjct: 39 MCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTD 98
Query: 86 PLNDEDRRPWLNNINRIIHQLNVDNLTGVLVCSALRRNYRDIIRNNNRVVFIYLKAEFG- 144
L L N + H +V + R N + + + I E
Sbjct: 99 ILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETIRWAQELRL 158
Query: 145 --VILSRLQKRAEHFMPA 160
++ +R + +
Sbjct: 159 RCLVTTRDVEISNAASQT 176
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human
hepatitis C virus (HCV), different isolates [TaxId:
11103]}
Length = 136
Score = 25.2 bits (54), Expect = 9.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 40 VFVIMGVSGSGKSTI 54
V + +GSGKST
Sbjct: 10 VAHLHAPTGSGKSTK 24
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,612,112
Number of extensions: 75424
Number of successful extensions: 500
Number of sequences better than 10.0: 1
Number of HSP's gapped: 493
Number of HSP's successfully gapped: 148
Length of query: 433
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 345
Effective length of database: 1,199,356
Effective search space: 413777820
Effective search space used: 413777820
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.3 bits)