Query psy1678
Match_columns 297
No_of_seqs 279 out of 1998
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 21:51:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k40_A Aromatic-L-amino-acid d 100.0 1.1E-44 3.8E-49 350.0 23.9 238 17-297 1-238 (475)
2 4e1o_A HDC, histidine decarbox 100.0 1.2E-43 4E-48 343.1 25.3 242 14-297 3-245 (481)
3 1js3_A DDC;, DOPA decarboxylas 100.0 1.3E-38 4.6E-43 307.3 24.5 239 17-297 1-239 (486)
4 3vp6_A Glutamate decarboxylase 100.0 3.1E-35 1E-39 286.4 26.4 225 60-297 20-252 (511)
5 2okj_A Glutamate decarboxylase 100.0 3.6E-34 1.2E-38 277.8 26.4 232 13-297 12-249 (504)
6 2jis_A Cysteine sulfinic acid 100.0 5.8E-32 2E-36 263.2 23.4 227 56-297 31-263 (515)
7 2qma_A Diaminobutyrate-pyruvat 100.0 1.6E-31 5.4E-36 258.8 24.3 239 47-297 17-262 (497)
8 2dgk_A GAD-beta, GADB, glutama 99.9 2E-20 6.7E-25 178.6 19.6 178 93-286 7-186 (452)
9 3hbx_A GAD 1, glutamate decarb 99.8 8.3E-19 2.8E-23 170.1 19.1 185 87-286 14-201 (502)
10 3mc6_A Sphingosine-1-phosphate 99.8 3.5E-18 1.2E-22 164.7 15.8 169 100-286 34-205 (497)
11 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 2E-18 6.9E-23 164.4 11.0 154 102-288 21-195 (450)
12 3mad_A Sphingosine-1-phosphate 99.7 7.4E-18 2.5E-22 163.4 13.2 169 102-286 69-238 (514)
13 3f9t_A TDC, L-tyrosine decarbo 99.6 7.4E-14 2.5E-18 128.8 20.1 166 103-286 4-169 (397)
14 2z67_A O-phosphoseryl-tRNA(SEC 99.5 4.6E-14 1.6E-18 134.9 13.6 184 59-291 29-230 (456)
15 1wyu_B Glycine dehydrogenase s 99.5 9.3E-13 3.2E-17 126.4 17.3 171 93-286 31-202 (474)
16 4hvk_A Probable cysteine desul 98.8 5.4E-08 1.8E-12 88.8 12.6 100 163-286 35-137 (382)
17 4eb5_A Probable cysteine desul 98.7 9.1E-08 3.1E-12 87.6 12.5 97 166-286 38-137 (382)
18 3hl2_A O-phosphoseryl-tRNA(SEC 98.7 2.8E-07 9.4E-12 87.6 13.5 156 102-287 39-212 (501)
19 3lvm_A Cysteine desulfurase; s 98.6 1.2E-07 4.1E-12 88.3 10.9 95 168-286 65-162 (423)
20 1wyu_A Glycine dehydrogenase ( 98.6 4.3E-07 1.5E-11 85.7 13.9 152 92-279 30-192 (438)
21 3vax_A Putative uncharacterize 98.6 2.7E-07 9.2E-12 85.2 11.2 131 133-286 22-158 (400)
22 1svv_A Threonine aldolase; str 98.6 2.8E-07 9.7E-12 83.5 10.9 107 148-287 30-138 (359)
23 3a9z_A Selenocysteine lyase; P 98.6 5E-07 1.7E-11 84.5 12.8 145 133-286 20-174 (432)
24 1eg5_A Aminotransferase; PLP-d 98.5 7.1E-07 2.4E-11 81.6 12.2 94 169-286 42-138 (384)
25 3nnk_A Ureidoglycine-glyoxylat 98.5 7.3E-07 2.5E-11 82.4 12.2 128 128-287 8-137 (411)
26 3isl_A Purine catabolism prote 98.5 9.4E-07 3.2E-11 81.8 12.5 126 129-287 7-135 (416)
27 2yrr_A Aminotransferase, class 98.5 1.7E-07 5.8E-12 84.6 6.6 93 166-286 28-122 (353)
28 2dr1_A PH1308 protein, 386AA l 98.4 6.7E-07 2.3E-11 81.9 10.0 93 166-286 48-143 (386)
29 1vjo_A Alanine--glyoxylate ami 98.4 1.2E-06 4E-11 80.8 11.6 94 167-287 63-158 (393)
30 2z9v_A Aspartate aminotransfer 98.4 2E-06 6.8E-11 79.1 11.6 122 131-286 8-131 (392)
31 3kgw_A Alanine-glyoxylate amin 98.4 1.3E-06 4.3E-11 80.1 9.7 126 130-287 20-147 (393)
32 2bkw_A Alanine-glyoxylate amin 98.3 1.2E-06 4.2E-11 80.1 8.9 130 132-286 4-135 (385)
33 2e7j_A SEP-tRNA:Cys-tRNA synth 98.3 1.3E-06 4.3E-11 79.7 8.4 87 172-288 54-143 (371)
34 2huf_A Alanine glyoxylate amin 98.3 2.5E-06 8.4E-11 78.5 10.3 94 166-286 47-142 (393)
35 3zrp_A Serine-pyruvate aminotr 98.3 1.7E-06 6E-11 78.9 9.0 94 166-286 30-125 (384)
36 1t3i_A Probable cysteine desul 98.3 5.7E-06 1.9E-10 76.5 12.6 93 170-286 71-168 (420)
37 2ch1_A 3-hydroxykynurenine tra 98.3 2.9E-06 9.8E-11 78.1 10.4 95 166-287 46-142 (396)
38 2zc0_A Alanine glyoxylate tran 98.2 8.6E-06 3E-10 75.3 11.9 101 163-290 71-171 (407)
39 3ffr_A Phosphoserine aminotran 98.2 4.7E-06 1.6E-10 75.4 9.3 118 135-281 6-126 (362)
40 1j32_A Aspartate aminotransfer 98.2 7.7E-06 2.6E-10 75.2 10.6 112 149-286 49-162 (388)
41 3fsl_A Aromatic-amino-acid ami 98.2 3.6E-05 1.2E-09 70.7 14.6 117 145-286 47-169 (397)
42 3cai_A Possible aminotransfera 98.2 4.5E-06 1.5E-10 77.1 8.4 93 169-286 67-164 (406)
43 1u08_A Hypothetical aminotrans 98.1 1.4E-05 4.9E-10 73.3 11.6 112 148-285 48-161 (386)
44 1kmj_A Selenocysteine lyase; p 98.1 1E-05 3.5E-10 74.3 10.6 93 170-286 66-163 (406)
45 3b8x_A WBDK, pyridoxamine 5-ph 98.1 6.9E-06 2.4E-10 75.8 9.4 95 165-286 32-127 (390)
46 3nra_A Aspartate aminotransfer 98.1 5.9E-06 2E-10 76.3 8.8 99 163-286 74-178 (407)
47 1gd9_A Aspartate aminotransfer 98.1 7.6E-06 2.6E-10 75.2 9.3 113 148-286 44-159 (389)
48 1v72_A Aldolase; PLP-dependent 98.1 2.7E-06 9.2E-11 76.9 6.0 87 170-286 42-133 (356)
49 3tcm_A Alanine aminotransferas 98.1 3E-05 1E-09 74.5 13.6 110 160-294 127-238 (500)
50 1o4s_A Aspartate aminotransfer 98.1 1.4E-05 4.9E-10 73.7 10.2 113 148-286 59-173 (389)
51 2jis_A Cysteine sulfinic acid 98.1 1.6E-05 5.6E-10 76.6 10.9 121 17-159 34-164 (515)
52 3aow_A Putative uncharacterize 98.1 2.4E-05 8.1E-10 74.1 11.9 114 147-288 95-211 (448)
53 1iug_A Putative aspartate amin 98.1 3.8E-06 1.3E-10 75.8 6.0 89 166-282 29-119 (352)
54 2c81_A Glutamine-2-deoxy-scyll 98.1 1.6E-05 5.4E-10 74.1 10.0 86 172-286 43-129 (418)
55 4dq6_A Putative pyridoxal phos 98.1 1.6E-05 5.5E-10 72.8 9.9 110 149-286 51-164 (391)
56 3t18_A Aminotransferase class 98.0 4.1E-05 1.4E-09 71.0 12.7 136 125-288 38-174 (413)
57 2o0r_A RV0858C (N-succinyldiam 98.0 1.2E-05 4.2E-10 74.6 8.2 112 148-285 43-158 (411)
58 3dzz_A Putative pyridoxal 5'-p 98.0 3E-05 1E-09 70.9 10.7 109 149-285 46-157 (391)
59 3nyt_A Aminotransferase WBPE; 98.0 3.6E-06 1.2E-10 77.2 4.4 89 165-286 33-122 (367)
60 1vp4_A Aminotransferase, putat 98.0 2.3E-05 7.8E-10 73.3 9.9 114 146-288 61-180 (425)
61 3rq1_A Aminotransferase class 98.0 5.8E-05 2E-09 70.1 12.6 114 148-288 61-175 (418)
62 3piu_A 1-aminocyclopropane-1-c 98.0 4.6E-05 1.6E-09 71.3 11.9 99 166-292 85-190 (435)
63 3ly1_A Putative histidinol-pho 98.0 2.4E-05 8.2E-10 70.8 9.4 85 174-286 54-138 (354)
64 1m32_A 2-aminoethylphosphonate 98.0 1.3E-05 4.3E-10 72.5 7.5 90 172-286 38-128 (366)
65 1b9h_A AHBA synthase, protein 98.0 6.1E-05 2.1E-09 69.2 12.1 91 163-286 34-125 (388)
66 3e9k_A Kynureninase; kynurenin 98.0 1.5E-05 5.1E-10 75.5 8.1 115 148-287 87-211 (465)
67 7aat_A Aspartate aminotransfer 98.0 8.6E-05 2.9E-09 68.5 13.1 150 113-286 17-171 (401)
68 3cq5_A Histidinol-phosphate am 98.0 4.6E-05 1.6E-09 69.7 11.1 92 169-286 71-162 (369)
69 3kax_A Aminotransferase, class 98.0 3.4E-05 1.2E-09 70.4 10.2 90 169-284 61-153 (383)
70 2w8t_A SPT, serine palmitoyltr 98.0 8.8E-05 3E-09 69.4 13.1 82 170-286 108-189 (427)
71 1xi9_A Putative transaminase; 97.9 1.9E-05 6.5E-10 73.2 8.2 98 163-286 74-173 (406)
72 4f4e_A Aromatic-amino-acid ami 97.9 0.00015 5.3E-09 67.4 14.2 151 111-286 36-191 (420)
73 3ele_A Amino transferase; RER0 97.9 4.2E-05 1.4E-09 70.4 10.1 99 163-286 72-171 (398)
74 2fnu_A Aminotransferase; prote 97.9 1.5E-05 5E-10 72.7 6.9 85 175-286 36-120 (375)
75 3l8a_A METC, putative aminotra 97.9 5.2E-05 1.8E-09 70.7 10.5 91 170-286 99-192 (421)
76 1yiz_A Kynurenine aminotransfe 97.9 6.2E-05 2.1E-09 70.2 10.6 112 148-285 55-180 (429)
77 1c7n_A Cystalysin; transferase 97.9 6.1E-05 2.1E-09 69.4 10.3 91 169-285 68-161 (399)
78 3frk_A QDTB; aminotransferase, 97.9 7.4E-06 2.5E-10 75.0 4.0 91 163-286 32-123 (373)
79 3meb_A Aspartate aminotransfer 97.9 0.00054 1.8E-08 64.6 17.0 151 111-286 36-198 (448)
80 2qma_A Diaminobutyrate-pyruvat 97.9 3.7E-05 1.3E-09 73.6 8.9 122 15-159 27-156 (497)
81 3ffh_A Histidinol-phosphate am 97.9 3.5E-05 1.2E-09 70.0 8.3 84 175-286 71-154 (363)
82 1yaa_A Aspartate aminotransfer 97.9 0.00013 4.4E-09 67.6 12.3 150 112-286 17-172 (412)
83 1o69_A Aminotransferase; struc 97.8 4.5E-05 1.6E-09 70.5 9.0 87 167-286 32-118 (394)
84 2ay1_A Aroat, aromatic amino a 97.8 0.00026 9E-09 64.9 14.0 97 163-286 65-165 (394)
85 3fdb_A Beta C-S lyase, putativ 97.8 7.7E-05 2.6E-09 67.9 10.1 89 170-286 61-149 (377)
86 3euc_A Histidinol-phosphate am 97.8 2E-05 6.7E-10 71.8 6.1 85 175-286 71-155 (367)
87 3ju7_A Putative PLP-dependent 97.8 0.00016 5.3E-09 66.9 12.3 89 166-286 35-125 (377)
88 2vyc_A Biodegradative arginine 97.8 0.00016 5.5E-09 73.1 13.3 83 175-286 209-301 (755)
89 1v2d_A Glutamine aminotransfer 97.8 3.8E-05 1.3E-09 70.3 8.1 105 148-285 43-150 (381)
90 1elu_A L-cysteine/L-cystine C- 97.8 2.7E-05 9.4E-10 71.1 6.9 90 170-286 58-153 (390)
91 3uwc_A Nucleotide-sugar aminot 97.8 1.8E-05 6.3E-10 72.1 5.6 104 148-286 21-124 (374)
92 1iay_A ACC synthase 2, 1-amino 97.8 0.00027 9.3E-09 65.8 13.7 100 168-291 84-186 (428)
93 3dr4_A Putative perosamine syn 97.8 3.1E-05 1.1E-09 71.3 7.1 88 166-286 55-143 (391)
94 3tqx_A 2-amino-3-ketobutyrate 97.8 0.00012 4.1E-09 67.1 11.0 90 170-294 87-176 (399)
95 3f0h_A Aminotransferase; RER07 97.8 5.7E-05 1.9E-09 68.8 8.2 94 166-285 47-142 (376)
96 2q7w_A Aspartate aminotransfer 97.8 0.00023 7.7E-09 65.3 12.2 101 162-286 64-168 (396)
97 2x3l_A ORN/Lys/Arg decarboxyla 97.8 9E-06 3.1E-10 77.1 2.8 130 114-280 6-142 (446)
98 2zyj_A Alpha-aminodipate amino 97.8 9.6E-05 3.3E-09 68.1 9.6 87 167-286 74-160 (397)
99 1d2f_A MALY protein; aminotran 97.8 0.00013 4.5E-09 66.9 10.5 111 148-286 46-160 (390)
100 1mdo_A ARNB aminotransferase; 97.7 7.3E-05 2.5E-09 68.6 8.6 82 176-286 44-126 (393)
101 3h14_A Aminotransferase, class 97.7 8.7E-05 3E-09 68.2 9.1 110 148-283 49-160 (391)
102 1ajs_A Aspartate aminotransfer 97.7 0.00019 6.5E-09 66.4 11.4 120 148-286 53-179 (412)
103 2dou_A Probable N-succinyldiam 97.7 0.00015 5E-09 66.3 10.4 114 148-286 43-157 (376)
104 3g0t_A Putative aminotransfera 97.7 0.00011 3.7E-09 68.5 9.4 101 163-285 78-179 (437)
105 1ax4_A Tryptophanase; tryptoph 97.7 0.00018 6.1E-09 67.8 10.7 97 163-287 72-179 (467)
106 2o1b_A Aminotransferase, class 97.7 0.00015 5E-09 67.3 9.8 114 148-286 65-180 (404)
107 2po3_A 4-dehydrase; external a 97.7 0.00023 8E-09 66.3 11.1 85 167-286 52-137 (424)
108 3jtx_A Aminotransferase; NP_28 97.7 0.00032 1.1E-08 64.3 11.7 98 168-286 67-167 (396)
109 2z61_A Probable aspartate amin 97.7 0.00026 9E-09 64.4 11.0 107 148-286 47-153 (370)
110 3ihj_A Alanine aminotransferas 97.7 0.00038 1.3E-08 66.8 12.4 106 161-288 123-231 (498)
111 3lws_A Aromatic amino acid bet 97.6 0.0001 3.6E-09 66.7 7.9 119 131-283 11-133 (357)
112 2gb3_A Aspartate aminotransfer 97.6 5.9E-05 2E-09 70.0 6.3 109 149-285 62-172 (409)
113 3ezs_A Aminotransferase ASPB; 97.6 0.00014 4.8E-09 66.2 8.7 111 148-286 41-153 (376)
114 3a2b_A Serine palmitoyltransfe 97.6 0.00023 8E-09 65.4 10.1 83 169-286 86-168 (398)
115 1b5p_A Protein (aspartate amin 97.6 0.00032 1.1E-08 64.4 10.9 94 167-286 68-163 (385)
116 3b46_A Aminotransferase BNA3; 97.6 0.0001 3.4E-09 69.5 7.5 113 147-285 74-199 (447)
117 3get_A Histidinol-phosphate am 97.6 8.1E-05 2.8E-09 67.7 6.6 82 175-285 69-151 (365)
118 3fvs_A Kynurenine--oxoglutarat 97.6 0.00017 5.7E-09 66.9 8.8 99 163-286 63-173 (422)
119 3ftb_A Histidinol-phosphate am 97.6 8.6E-05 3E-09 67.2 6.6 80 175-286 65-144 (361)
120 3bb8_A CDP-4-keto-6-deoxy-D-gl 97.6 7.8E-05 2.7E-09 70.0 6.2 97 165-286 60-157 (437)
121 2oga_A Transaminase; PLP-depen 97.5 0.00022 7.6E-09 65.9 8.8 82 176-286 68-150 (399)
122 3p1t_A Putative histidinol-pho 97.5 0.00071 2.4E-08 60.4 11.2 79 175-283 55-133 (337)
123 3e2y_A Kynurenine-oxoglutarate 97.5 0.00029 1E-08 64.9 8.8 112 149-285 42-165 (410)
124 2ez2_A Beta-tyrosinase, tyrosi 97.5 0.00036 1.2E-08 65.5 9.5 89 163-287 71-170 (456)
125 3n75_A LDC, lysine decarboxyla 97.5 0.00084 2.9E-08 67.3 12.5 83 176-287 200-292 (715)
126 2x5d_A Probable aminotransfera 97.4 0.00032 1.1E-08 65.0 8.5 113 148-285 55-170 (412)
127 3op7_A Aminotransferase class 97.4 0.00016 5.6E-09 65.8 5.6 92 162-285 58-152 (375)
128 1fg7_A Histidinol phosphate am 97.4 0.00024 8.2E-09 64.7 6.7 84 175-285 62-145 (356)
129 1c4k_A Protein (ornithine deca 97.4 0.00034 1.2E-08 70.5 8.0 83 175-286 177-270 (730)
130 2oqx_A Tryptophanase; lyase, p 97.3 0.0014 4.7E-08 61.6 11.6 98 162-286 69-178 (467)
131 1w23_A Phosphoserine aminotran 97.3 7.4E-05 2.5E-09 67.6 2.7 94 166-285 43-139 (360)
132 1bw0_A TAT, protein (tyrosine 97.3 0.0004 1.4E-08 64.3 7.7 95 166-286 74-176 (416)
133 1fc4_A 2-amino-3-ketobutyrate 97.3 0.0016 5.5E-08 59.7 11.5 85 171-290 90-174 (401)
134 3pj0_A LMO0305 protein; struct 97.3 0.0003 1E-08 63.6 6.5 80 175-283 52-134 (359)
135 3kki_A CAI-1 autoinducer synth 97.3 0.0014 4.7E-08 60.6 10.9 78 175-287 108-185 (409)
136 1jg8_A L-ALLO-threonine aldola 97.3 0.00025 8.4E-09 63.9 5.6 89 163-286 34-125 (347)
137 2r2n_A Kynurenine/alpha-aminoa 97.3 0.00056 1.9E-08 63.8 8.2 98 168-285 79-176 (425)
138 2x5f_A Aspartate_tyrosine_phen 97.3 0.0011 3.6E-08 61.8 10.0 91 168-286 89-185 (430)
139 3n0l_A Serine hydroxymethyltra 97.2 0.00082 2.8E-08 61.9 8.6 92 167-287 67-163 (417)
140 2rfv_A Methionine gamma-lyase; 97.2 0.0017 5.9E-08 59.9 10.4 82 170-286 63-148 (398)
141 3ez1_A Aminotransferase MOCR f 97.2 0.00094 3.2E-08 61.9 8.4 90 176-285 75-168 (423)
142 3dyd_A Tyrosine aminotransfera 97.2 0.00057 2E-08 63.8 6.8 97 163-286 92-190 (427)
143 1qz9_A Kynureninase; kynurenin 97.2 0.0016 5.3E-08 60.1 9.6 86 172-285 72-163 (416)
144 3ke3_A Putative serine-pyruvat 97.2 0.0022 7.4E-08 58.8 10.4 92 166-287 30-134 (379)
145 2bwn_A 5-aminolevulinate synth 97.2 0.0061 2.1E-07 55.9 13.5 82 172-286 92-173 (401)
146 2a7v_A Serine hydroxymethyltra 97.1 0.0014 4.7E-08 63.0 9.2 98 165-287 94-202 (490)
147 2vi8_A Serine hydroxymethyltra 97.1 0.00028 9.5E-09 64.8 4.1 92 166-286 64-161 (405)
148 3ppl_A Aspartate aminotransfer 97.1 0.0011 3.9E-08 61.5 8.1 92 177-285 84-177 (427)
149 1bs0_A Protein (8-amino-7-oxon 97.1 0.0034 1.2E-07 57.1 11.1 81 171-286 84-164 (384)
150 2dkj_A Serine hydroxymethyltra 97.1 0.00035 1.2E-08 64.2 4.1 91 167-286 65-161 (407)
151 4eu1_A Mitochondrial aspartate 97.1 0.0032 1.1E-07 58.1 10.7 102 162-286 74-179 (409)
152 2pb2_A Acetylornithine/succiny 97.0 0.0056 1.9E-07 56.9 12.0 90 170-285 98-199 (420)
153 1sff_A 4-aminobutyrate aminotr 97.0 0.003 1E-07 58.4 10.0 91 171-286 84-193 (426)
154 1rv3_A Serine hydroxymethyltra 97.0 0.00082 2.8E-08 64.2 6.2 99 163-286 82-191 (483)
155 3i4j_A Aminotransferase, class 97.0 0.0021 7.3E-08 59.7 8.8 98 170-286 71-185 (430)
156 4adb_A Succinylornithine trans 97.0 0.0046 1.6E-07 56.7 10.9 70 171-261 81-150 (406)
157 2ord_A Acoat, acetylornithine 97.0 0.0057 1.9E-07 56.0 11.4 89 170-285 81-181 (397)
158 3b1d_A Betac-S lyase; HET: PLP 96.0 0.00013 4.3E-09 67.2 0.0 92 169-286 68-162 (392)
159 1s0a_A Adenosylmethionine-8-am 96.9 0.011 3.6E-07 54.9 13.1 93 174-286 89-200 (429)
160 3i16_A Aluminum resistance pro 96.9 0.0025 8.7E-08 60.0 8.8 83 169-285 75-172 (427)
161 3dxv_A Alpha-amino-epsilon-cap 96.9 0.0056 1.9E-07 57.0 10.9 92 169-285 84-195 (439)
162 3f6t_A Aspartate aminotransfer 96.9 0.0031 1.1E-07 61.0 9.1 120 144-285 117-242 (533)
163 1vef_A Acetylornithine/acetyl- 96.9 0.0078 2.7E-07 55.0 11.4 86 170-285 86-183 (395)
164 3gbx_A Serine hydroxymethyltra 96.8 0.0016 5.6E-08 59.8 6.7 90 169-287 74-168 (420)
165 3m5u_A Phosphoserine aminotran 96.8 0.0012 4.2E-08 60.8 5.7 119 135-279 7-135 (361)
166 2cb1_A O-acetyl homoserine sul 96.8 0.0045 1.5E-07 57.5 9.2 79 172-286 57-139 (412)
167 2eo5_A 419AA long hypothetical 96.8 0.011 3.7E-07 54.8 11.8 88 173-286 88-206 (419)
168 3d6k_A Putative aminotransfera 96.8 0.0048 1.6E-07 57.3 9.1 98 169-286 78-176 (422)
169 3jzl_A Putative cystathionine 96.7 0.0035 1.2E-07 58.7 8.1 79 178-286 66-158 (409)
170 3hdo_A Histidinol-phosphate am 96.7 0.007 2.4E-07 54.7 9.9 73 175-275 69-141 (360)
171 3e77_A Phosphoserine aminotran 96.7 0.00054 1.9E-08 63.6 2.4 125 135-285 16-150 (377)
172 2fyf_A PSAT, phosphoserine ami 96.7 0.0073 2.5E-07 55.5 10.0 82 165-275 72-157 (398)
173 3ecd_A Serine hydroxymethyltra 96.7 0.0056 1.9E-07 56.3 9.0 89 170-287 77-171 (425)
174 3tfu_A Adenosylmethionine-8-am 96.7 0.0079 2.7E-07 56.8 10.1 97 171-286 118-229 (457)
175 3if2_A Aminotransferase; YP_26 96.6 0.0033 1.1E-07 58.6 7.2 111 163-286 79-202 (444)
176 3qhx_A Cystathionine gamma-syn 96.6 0.0071 2.4E-07 55.9 9.4 77 175-286 70-150 (392)
177 1uu1_A Histidinol-phosphate am 96.6 0.0022 7.4E-08 57.6 5.7 73 176-280 61-136 (335)
178 3ndn_A O-succinylhomoserine su 96.6 0.0089 3E-07 55.8 9.8 77 175-286 85-165 (414)
179 3ri6_A O-acetylhomoserine sulf 96.6 0.0098 3.4E-07 55.9 10.1 83 165-286 80-166 (430)
180 3ht4_A Aluminum resistance pro 96.6 0.0025 8.7E-08 60.0 6.0 87 173-286 67-164 (431)
181 3a8u_X Omega-amino acid--pyruv 96.5 0.027 9.2E-07 52.5 12.9 97 171-286 93-214 (449)
182 2c0r_A PSAT, phosphoserine ami 96.5 0.011 3.7E-07 53.4 9.7 88 166-280 44-137 (362)
183 1e5e_A MGL, methionine gamma-l 96.5 0.012 4.1E-07 54.5 10.0 77 175-286 66-146 (404)
184 3qm2_A Phosphoserine aminotran 96.5 0.00014 4.9E-09 67.7 -3.4 94 166-286 67-165 (386)
185 3fkd_A L-threonine-O-3-phospha 96.5 0.0067 2.3E-07 54.5 7.8 67 175-271 54-121 (350)
186 1gc0_A Methionine gamma-lyase; 96.5 0.014 4.9E-07 53.7 10.2 77 175-286 69-149 (398)
187 2ctz_A O-acetyl-L-homoserine s 96.4 0.026 8.8E-07 52.6 11.9 76 176-286 63-143 (421)
188 3nx3_A Acoat, acetylornithine 96.4 0.025 8.4E-07 51.7 11.1 41 170-221 77-117 (395)
189 3dod_A Adenosylmethionine-8-am 96.4 0.035 1.2E-06 51.9 12.3 97 170-285 86-205 (448)
190 1zod_A DGD, 2,2-dialkylglycine 96.3 0.045 1.5E-06 50.6 13.0 91 171-286 85-198 (433)
191 1z7d_A Ornithine aminotransfer 96.3 0.029 9.9E-07 52.4 11.6 91 171-285 107-209 (433)
192 3acz_A Methionine gamma-lyase; 96.3 0.011 3.6E-07 54.5 8.4 78 174-286 62-143 (389)
193 3k28_A Glutamate-1-semialdehyd 96.2 0.02 6.8E-07 53.2 10.0 89 172-286 94-196 (429)
194 2oat_A Ornithine aminotransfer 96.1 0.023 7.9E-07 53.2 9.6 87 175-285 122-220 (439)
195 3gju_A Putative aminotransfera 96.0 0.072 2.4E-06 50.0 12.7 98 170-286 94-216 (460)
196 3h7f_A Serine hydroxymethyltra 96.0 0.0037 1.3E-07 58.7 3.7 92 167-287 87-184 (447)
197 3hvy_A Cystathionine beta-lyas 96.0 0.015 5.1E-07 54.7 7.8 78 178-286 81-173 (427)
198 4a6r_A Omega transaminase; tra 96.0 0.037 1.3E-06 52.0 10.5 97 170-286 93-214 (459)
199 1qgn_A Protein (cystathionine 96.0 0.054 1.9E-06 51.1 11.5 77 175-286 118-198 (445)
200 3l44_A Glutamate-1-semialdehyd 96.0 0.044 1.5E-06 50.7 10.8 40 171-220 95-134 (434)
201 1lc5_A COBD, L-threonine-O-3-p 95.9 0.0085 2.9E-07 54.2 5.6 71 176-276 64-134 (364)
202 3ruy_A Ornithine aminotransfer 95.9 0.022 7.4E-07 51.9 8.1 37 173-220 80-116 (392)
203 3fq8_A Glutamate-1-semialdehyd 95.8 0.028 9.7E-07 52.0 8.6 42 169-220 90-131 (427)
204 1cs1_A CGS, protein (cystathio 95.7 0.045 1.6E-06 49.9 9.8 76 176-286 57-136 (386)
205 2eh6_A Acoat, acetylornithine 95.6 0.065 2.2E-06 48.3 10.0 36 174-219 73-108 (375)
206 3n5m_A Adenosylmethionine-8-am 95.5 0.21 7.2E-06 46.5 13.6 97 169-285 89-209 (452)
207 3hmu_A Aminotransferase, class 95.5 0.2 6.9E-06 47.3 13.6 97 170-286 98-218 (472)
208 2epj_A Glutamate-1-semialdehyd 95.4 0.07 2.4E-06 49.4 10.0 42 169-220 94-135 (434)
209 3oks_A 4-aminobutyrate transam 95.4 0.092 3.1E-06 49.2 10.7 43 170-220 103-145 (451)
210 2cy8_A D-phgat, D-phenylglycin 95.3 0.089 3E-06 49.1 10.4 42 168-219 94-135 (453)
211 3k7y_A Aspartate aminotransfer 95.3 0.21 7.1E-06 46.4 12.6 102 162-286 67-170 (405)
212 2aeu_A Hypothetical protein MJ 95.3 0.039 1.3E-06 50.4 7.5 78 170-283 57-137 (374)
213 3ei9_A LL-diaminopimelate amin 95.3 0.056 1.9E-06 49.9 8.7 67 166-261 97-163 (432)
214 2fq6_A Cystathionine beta-lyas 95.2 0.036 1.2E-06 51.8 7.2 82 165-285 80-165 (415)
215 4e77_A Glutamate-1-semialdehyd 95.1 0.14 4.7E-06 47.4 10.9 40 171-220 93-132 (429)
216 1ibj_A CBL, cystathionine beta 95.1 0.037 1.3E-06 52.4 7.1 78 172-285 134-215 (464)
217 4ffc_A 4-aminobutyrate aminotr 95.1 0.36 1.2E-05 45.1 13.8 44 169-220 105-148 (453)
218 1pff_A Methionine gamma-lyase; 94.9 0.068 2.3E-06 47.4 7.9 75 176-285 3-81 (331)
219 2e7u_A Glutamate-1-semialdehyd 94.9 0.12 4E-06 47.7 9.6 42 169-220 90-131 (424)
220 3asa_A LL-diaminopimelate amin 94.9 0.27 9.1E-06 44.8 12.0 74 167-271 75-150 (400)
221 3i5t_A Aminotransferase; pyrid 94.8 0.3 1E-05 46.1 12.4 99 169-286 95-216 (476)
222 3qgu_A LL-diaminopimelate amin 94.7 0.11 3.8E-06 48.1 9.0 80 163-271 107-196 (449)
223 1n8p_A Cystathionine gamma-lya 94.2 0.068 2.3E-06 49.2 6.2 74 175-285 59-136 (393)
224 2cjg_A L-lysine-epsilon aminot 94.0 0.091 3.1E-06 49.2 6.8 42 171-221 101-143 (449)
225 3cog_A Cystathionine gamma-lya 93.8 0.11 3.7E-06 48.1 6.8 81 166-286 66-150 (403)
226 3nmy_A Xometc, cystathionine g 93.2 0.3 1E-05 45.1 8.8 82 165-286 65-151 (400)
227 1ohv_A 4-aminobutyrate aminotr 92.8 0.16 5.3E-06 48.0 6.3 44 169-221 108-151 (472)
228 3g7q_A Valine-pyruvate aminotr 92.7 0.13 4.5E-06 46.9 5.5 65 146-217 49-118 (417)
229 4ao9_A Beta-phenylalanine amin 92.2 0.33 1.1E-05 45.9 7.6 41 171-221 127-167 (454)
230 3bwn_A AT1G70560, L-tryptophan 91.4 0.51 1.7E-05 43.1 7.8 81 170-272 71-151 (391)
231 2hox_A ALLIIN lyase 1; cystein 90.3 0.15 5.3E-06 47.4 3.3 91 169-285 102-194 (427)
232 4e3q_A Pyruvate transaminase; 89.0 1.3 4.5E-05 41.9 8.7 44 170-222 110-153 (473)
233 2zy4_A L-aspartate beta-decarb 88.4 0.58 2E-05 45.1 5.8 93 171-284 143-242 (546)
234 2yky_A Beta-transaminase; tran 82.5 0.29 9.8E-06 46.4 0.0 39 171-220 140-179 (465)
235 4atq_A 4-aminobutyrate transam 77.5 4.7 0.00016 37.8 7.0 43 171-221 107-149 (456)
236 4e1o_A HDC, histidine decarbox 75.4 2.6 8.7E-05 39.6 4.5 33 57-89 4-36 (481)
237 3k40_A Aromatic-L-amino-acid d 74.6 2.6 9E-05 39.5 4.4 31 59-89 1-31 (475)
238 1j0a_A 1-aminocyclopropane-1-c 72.9 9 0.00031 33.9 7.3 58 199-271 71-129 (325)
239 3ou5_A Serine hydroxymethyltra 64.7 11 0.00037 35.7 6.1 100 164-287 93-202 (490)
240 1yhu_B Giant hemoglobins B cha 64.6 17 0.00059 27.8 6.5 64 16-79 55-121 (144)
241 2zs0_B Extracellular giant hem 64.1 16 0.00056 27.9 6.3 75 6-80 43-120 (142)
242 1js3_A DDC;, DOPA decarboxylas 63.9 6.3 0.00022 36.7 4.5 31 59-89 1-31 (486)
243 1f2d_A 1-aminocyclopropane-1-c 63.7 27 0.00092 31.0 8.5 77 199-291 68-155 (341)
244 1x9f_B Erythrocruorin, globin 60.6 23 0.00078 27.2 6.6 64 17-80 56-122 (145)
245 1tzj_A ACC deaminase, 1-aminoc 59.8 20 0.0007 31.6 7.0 58 199-271 68-133 (338)
246 4b4y_A Neuroglobin; transport 59.8 53 0.0018 25.3 8.7 63 17-79 63-128 (154)
247 1x9f_D Globin C, hemoglobin ch 58.0 21 0.00071 27.2 5.9 65 17-81 54-121 (140)
248 1t1v_A SH3BGRL3, SH3 domain-bi 56.5 39 0.0013 23.4 6.8 53 239-296 2-64 (93)
249 4d9b_A D-cysteine desulfhydras 56.4 33 0.0011 30.5 7.7 79 199-296 82-169 (342)
250 1yhu_D Hemoglobin B2 chain; gl 55.0 19 0.00067 27.8 5.3 72 6-77 47-122 (149)
251 1x46_A Globin chain, hemoglobi 53.3 15 0.00051 28.4 4.4 61 17-77 56-122 (150)
252 1yhu_A Hemoglobin A1 chain; gl 51.5 26 0.00088 27.0 5.4 64 17-80 54-120 (145)
253 1yhu_C Hemoglobin B1A chain; g 46.9 24 0.00081 27.2 4.6 62 16-77 58-123 (148)
254 1spg_A Hemoglobin; carbon mono 46.6 34 0.0012 26.2 5.5 60 18-79 54-116 (144)
255 1h97_A Globin-3; HET: HEM; 1.1 45.8 48 0.0016 25.5 6.2 63 15-77 56-121 (147)
256 3bom_B Hemoglobin subunit beta 45.6 18 0.00061 28.0 3.7 64 16-81 54-120 (147)
257 2c0k_A Hemoglobin; oxygen tran 44.8 28 0.00094 26.9 4.7 62 16-77 53-120 (151)
258 2zs0_C Extracellular giant hem 44.6 17 0.00059 28.0 3.4 71 6-76 47-121 (147)
259 2vyw_A Hemoglobin; trematode, 44.0 28 0.00097 26.9 4.6 63 15-77 57-122 (148)
260 2q5c_A NTRC family transcripti 43.9 52 0.0018 26.8 6.4 52 239-295 95-146 (196)
261 4a0g_A Adenosylmethionine-8-am 43.2 49 0.0017 33.4 7.3 76 175-261 428-505 (831)
262 3d1k_B Hemoglobin subunit beta 42.7 14 0.00049 28.5 2.6 63 17-81 55-120 (146)
263 2zs0_A Extracellular giant hem 42.5 18 0.00063 27.6 3.2 71 6-76 43-116 (140)
264 1out_A Hemoglobin I; heme, oxy 41.4 34 0.0012 26.2 4.7 59 18-78 53-114 (143)
265 1x9f_C Erythrocruorin, globin 41.4 43 0.0015 25.9 5.3 73 5-77 50-126 (153)
266 1ith_A Hemoglobin (cyano Met); 41.3 35 0.0012 25.9 4.7 60 17-77 56-117 (141)
267 1x9f_A Globin IV, extracellula 40.5 36 0.0012 26.3 4.7 61 17-77 61-125 (151)
268 2pju_A Propionate catabolism o 40.4 70 0.0024 26.8 6.8 52 239-295 107-158 (225)
269 1wmu_A Hemoglobin D alpha chai 40.4 42 0.0014 25.5 5.1 61 18-80 51-114 (141)
270 3d1k_A Hemoglobin subunit alph 40.1 34 0.0012 26.1 4.5 58 18-77 52-112 (142)
271 2ct6_A SH3 domain-binding glut 39.3 64 0.0022 23.3 5.7 43 239-286 8-58 (111)
272 1sct_B Hemoglobin II (carbonmo 38.2 27 0.00093 26.9 3.7 64 17-80 63-129 (151)
273 3bom_A Hemoglobin subunit alph 38.1 31 0.0011 26.4 3.9 58 18-77 53-113 (143)
274 1hlb_A Hemoglobin (deoxy); oxy 38.0 35 0.0012 26.4 4.3 64 16-80 65-131 (158)
275 3p04_A Uncharacterized BCR; SE 37.8 9.8 0.00034 27.2 0.8 37 4-40 20-57 (87)
276 1cg5_A Protein (hemoglobin); o 37.6 27 0.00094 26.7 3.5 58 18-77 52-112 (141)
277 1b0b_A Hemoglobin; hemoprotein 37.2 19 0.00065 27.5 2.5 59 16-74 55-116 (142)
278 3ayr_A Endoglucanase; TIM barr 37.0 49 0.0017 29.6 5.7 37 260-296 74-121 (376)
279 1cg5_B Protein (hemoglobin); o 36.3 37 0.0012 26.1 4.1 62 18-81 52-115 (141)
280 1jf3_A Monomer hemoglobin comp 35.9 68 0.0023 24.3 5.6 64 18-81 51-120 (147)
281 1out_B Hemoglobin I; heme, oxy 35.5 21 0.00074 27.5 2.6 64 16-81 54-120 (146)
282 1v4x_B Hemoglobin beta chain; 35.3 22 0.00076 27.4 2.7 64 16-81 54-120 (146)
283 2r80_A Hemoglobin subunit alph 35.3 54 0.0018 24.9 4.9 60 18-79 51-113 (141)
284 2bk9_A CG9734-PA; oxygen trans 34.9 41 0.0014 25.9 4.2 63 16-78 52-120 (153)
285 2aa1_B Hemoglobin beta-C chain 34.7 17 0.00058 28.1 1.9 64 16-81 54-120 (146)
286 1a6m_A Myoglobin; heme protein 34.7 21 0.00072 27.7 2.4 61 17-79 56-119 (151)
287 1xq5_A Hemoglobin alpha-1 chai 34.5 52 0.0018 25.1 4.7 61 18-80 53-116 (143)
288 1fov_A Glutaredoxin 3, GRX3; a 34.2 96 0.0033 20.1 5.9 52 240-296 2-55 (82)
289 1q1f_A Neuroglobin; globin fol 33.6 36 0.0012 26.0 3.6 66 15-80 54-122 (151)
290 2b3t_B RF-1, peptide chain rel 33.5 75 0.0026 28.7 6.1 69 204-275 119-196 (360)
291 3vp6_A Glutamate decarboxylase 33.1 2.3E+02 0.008 26.2 10.0 122 15-159 17-151 (511)
292 2w72_B Human hemoglobin A; iro 32.7 25 0.00084 27.1 2.5 62 17-80 55-119 (146)
293 1jeb_A Hemoglobin zeta chain; 32.4 48 0.0017 25.1 4.2 59 18-78 52-113 (142)
294 2r80_B Hemoglobin subunit beta 32.3 31 0.0011 26.4 3.1 63 17-81 55-120 (146)
295 1lhs_A Myoglobin; oxygen stora 32.2 28 0.00096 27.0 2.8 60 17-78 56-118 (153)
296 3dwg_A Cysteine synthase B; su 31.4 1.5E+02 0.0053 25.8 7.9 32 240-271 98-129 (325)
297 1edg_A Endoglucanase A; family 31.1 54 0.0019 29.3 4.9 38 259-296 72-119 (380)
298 1zzp_A P150, C-ABL, proto-onco 30.9 74 0.0025 24.0 4.7 39 5-43 37-75 (130)
299 2izx_A CAMP-dependent protein 30.9 11 0.00039 22.5 0.2 21 23-43 20-40 (41)
300 4h51_A Aspartate aminotransfer 30.6 1.3E+02 0.0043 27.5 7.4 73 199-286 111-186 (420)
301 3nco_A Endoglucanase fncel5A; 30.6 76 0.0026 27.4 5.7 39 258-296 51-100 (320)
302 1bin_A Leghemoglobin A; heme, 30.4 1.7E+02 0.0056 21.7 7.2 64 17-80 53-118 (143)
303 1h1n_A Endo type cellulase ENG 30.4 75 0.0026 27.4 5.6 37 260-296 43-90 (305)
304 1sct_A Hemoglobin II (carbonmo 30.1 33 0.0011 26.4 2.9 64 17-80 62-128 (150)
305 2dc3_A Cytoglobin; myoglobin, 29.8 61 0.0021 26.2 4.6 65 16-80 75-143 (193)
306 3mkb_A Hemoglobin subunit alph 29.4 64 0.0022 24.7 4.4 58 18-77 51-111 (140)
307 2oif_A Horvu GLB1, non-legume 29.1 65 0.0022 24.8 4.5 63 17-79 62-130 (162)
308 3t3l_A Frataxin, mitochondrial 29.0 52 0.0018 25.2 3.7 33 12-44 4-36 (129)
309 4hrt_B Hemoglobin B chain; oxy 28.9 94 0.0032 23.8 5.4 64 18-81 65-131 (152)
310 2nrl_A Myoglobin; transport pr 28.4 62 0.0021 24.7 4.2 61 16-78 51-114 (147)
311 3lou_A Formyltetrahydrofolate 27.9 2.7E+02 0.0093 24.1 8.7 85 170-272 70-154 (292)
312 3l55_A B-1,4-endoglucanase/cel 27.6 64 0.0022 28.8 4.7 39 258-296 62-109 (353)
313 2wtg_A Globin-like protein; me 27.5 74 0.0025 25.0 4.6 62 4-82 93-154 (159)
314 3lb2_A Dehaloperoxidase A; glo 27.3 1.5E+02 0.0051 22.4 6.2 62 15-76 45-109 (137)
315 3o1l_A Formyltetrahydrofolate 26.7 2.5E+02 0.0085 24.5 8.3 84 170-271 80-163 (302)
316 3pt8_A Hemoglobin II; oxygen c 26.7 80 0.0027 24.1 4.6 61 17-77 58-121 (152)
317 3pt8_B Hemoglobin III; oxygen 26.4 71 0.0024 24.4 4.3 61 17-77 58-121 (152)
318 2khp_A Glutaredoxin; thioredox 26.2 1.5E+02 0.0051 19.8 6.9 53 239-296 6-60 (92)
319 2lhb_A Hemoglobin V (cyano Met 26.1 26 0.00089 27.0 1.6 28 17-44 65-92 (149)
320 3bbn_B Ribosomal protein S2; s 25.9 2.4E+02 0.0083 23.6 7.7 54 238-292 157-225 (231)
321 2kyg_A CAMP-dependent protein 25.6 17 0.00058 22.9 0.3 22 23-44 28-49 (50)
322 3rjz_A N-type ATP pyrophosphat 25.5 2.5E+02 0.0084 23.6 7.8 73 199-286 7-88 (237)
323 3qr3_A Endoglucanase EG-II; TI 25.4 1.1E+02 0.0038 27.1 5.9 39 258-296 53-102 (340)
324 3ic4_A Glutaredoxin (GRX-1); s 25.0 1E+02 0.0034 20.8 4.5 59 239-297 12-72 (92)
325 2vch_A Hydroquinone glucosyltr 24.0 1.8E+02 0.0063 26.8 7.4 68 198-288 358-427 (480)
326 1n91_A ORF, hypothetical prote 23.7 66 0.0022 23.8 3.3 29 170-207 49-77 (108)
327 1y7l_A O-acetylserine sulfhydr 23.5 3.5E+02 0.012 23.1 9.0 31 240-270 87-117 (316)
328 1m46_B IQ4, IQ4 motif from MYO 23.3 22 0.00077 18.6 0.4 10 2-11 10-19 (26)
329 3p9x_A Phosphoribosylglycinami 23.1 1.9E+02 0.0064 23.9 6.4 55 200-269 6-60 (211)
330 3ctg_A Glutaredoxin-2; reduced 23.0 2.3E+02 0.0079 20.9 6.9 55 239-296 37-98 (129)
331 1eca_A Erythrocruorin (AQUO Me 22.7 1.1E+02 0.0038 23.0 4.6 59 17-77 50-110 (136)
332 2w72_C Human hemoglobin A; iro 22.3 97 0.0033 23.3 4.3 59 18-78 51-112 (141)
333 3na8_A Putative dihydrodipicol 21.5 83 0.0029 27.6 4.2 31 266-296 33-63 (315)
334 1mba_A Myoglobin; oxygen stora 21.3 71 0.0024 24.2 3.3 60 18-77 57-119 (147)
335 1hlm_A Hemoglobin (cyano Met); 21.0 71 0.0024 24.6 3.3 58 15-73 64-124 (159)
336 3si9_A DHDPS, dihydrodipicolin 21.0 86 0.0029 27.6 4.2 31 266-296 31-61 (315)
337 3n0v_A Formyltetrahydrofolate 20.9 3.2E+02 0.011 23.5 7.8 84 170-271 65-148 (286)
338 3d5a_X RF1, peptide chain rele 20.8 1.1E+02 0.0038 27.5 4.8 69 204-275 115-192 (354)
339 1bh9_B TAFII28; histone fold, 20.4 1E+02 0.0035 21.9 3.6 24 271-294 66-89 (89)
340 3vc3_A Beta-cyanoalnine syntha 20.4 1.7E+02 0.006 25.8 6.1 53 200-270 89-142 (344)
No 1
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=1.1e-44 Score=349.97 Aligned_cols=238 Identities=72% Similarity=1.248 Sum_probs=213.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhh
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQMGSNIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYL 96 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~l~~~~p~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~~~~p~~l 96 (297)
||+++||+++++|||+|+||++++++|||.|.++|+ ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~------------------------------------------~l 38 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPG------------------------------------------YL 38 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTT------------------------------------------CS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHH------------------------------------------HH
Confidence 899999999999999999999999999998888765 34
Q ss_pred hccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHH
Q psy1678 97 RPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVM 176 (297)
Q Consensus 97 ~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v 176 (297)
++.++..+|++|.+++++++++.+.+.++.++|+||+|+||+++++.+++++++++++.+|+|+..|..+|++++||+++
T Consensus 39 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v 118 (475)
T 3k40_A 39 KPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVM 118 (475)
T ss_dssp GGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSSCCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeCCCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHH
Confidence 56677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHH
Q psy1678 177 LDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERA 256 (297)
Q Consensus 177 ~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Ka 256 (297)
++|+++++|+|++++..+.+.++|+||+|||+||++|+++||++.+.+.+..++++.+.+..++.+||+|+.+|+|+.|+
T Consensus 119 ~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~ 198 (475)
T 3k40_A 119 MDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERA 198 (475)
T ss_dssp HHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHH
T ss_pred HHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHH
Confidence 99999999999865443344568999999999999999999999876655445544433334678999999999999999
Q ss_pred HHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccEEc
Q psy1678 257 GLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFYI 297 (297)
Q Consensus 257 a~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~v 297 (297)
++++|++++.||+|++| ||+++|+++|+++.++|.+|++|
T Consensus 199 ~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v 238 (475)
T 3k40_A 199 GLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYA 238 (475)
T ss_dssp HHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEE
Confidence 99999999999999999 99999999999999999988864
No 2
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=343.12 Aligned_cols=242 Identities=48% Similarity=0.933 Sum_probs=214.7
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCh
Q psy1678 14 IIMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQMGSNIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEP 93 (297)
Q Consensus 14 ~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~l~~~~p~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~~~~p 93 (297)
..-||+++||+++++|+|+|+||++++++|||.|+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------------------------------------- 41 (481)
T 4e1o_A 3 LGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPG----------------------------------------- 41 (481)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTT-----------------------------------------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHH-----------------------------------------
Confidence 346999999999999999999999999999988887754
Q ss_pred hhhhccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHH
Q psy1678 94 GYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELE 173 (297)
Q Consensus 94 ~~l~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE 173 (297)
++++.++..+|++|.+++++++++.+.+.++.++|+||+|++|+++++.+++++++++.+++|+|+..|..+|++++||
T Consensus 42 -~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE 120 (481)
T 4e1o_A 42 -YLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELE 120 (481)
T ss_dssp -TTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHH
T ss_pred -HHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHH
Confidence 3456777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCccccc-cCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcch
Q psy1678 174 VVMLDWLGKMLDLPKEFLA-CSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSS 252 (297)
Q Consensus 174 ~~v~~~l~~llg~~~~~~~-~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~S 252 (297)
+++++|+++++|+|..++. .+.+.++|+||+|||+||++|+++||++.+.+.+..++++.+.+..++.+||+|+.+|+|
T Consensus 121 ~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s 200 (481)
T 4e1o_A 121 MNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSS 200 (481)
T ss_dssp HHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHH
T ss_pred HHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHH
Confidence 9999999999999976421 122345799999999999999999999987766555655544344478899999999999
Q ss_pred HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccEEc
Q psy1678 253 VERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFYI 297 (297)
Q Consensus 253 i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~v 297 (297)
+.|++.++|.+++.||+|++|+||+++|+++|+++.++|.+|++|
T Consensus 201 ~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~v 245 (481)
T 4e1o_A 201 VEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFV 245 (481)
T ss_dssp HHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEE
Confidence 999999999999999999999999999999999999999999865
No 3
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=1.3e-38 Score=307.34 Aligned_cols=239 Identities=56% Similarity=1.034 Sum_probs=202.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhh
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQMGSNIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYL 96 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~l~~~~p~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~~~~p~~l 96 (297)
||+++||+.+++|+|+|++|+++++++||.|.++|+ ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~ 38 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPG------------------------------------------YL 38 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTT------------------------------------------CS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHH------------------------------------------HH
Confidence 789999999999999999999999988888776654 34
Q ss_pred hccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHH
Q psy1678 97 RPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVM 176 (297)
Q Consensus 97 ~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v 176 (297)
++.++..+|++|.+.+++++++.+.+.++..+|+||+|+||++++++++++++++++.++|+|...|..+|..+++|.++
T Consensus 39 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~ 118 (486)
T 1js3_A 39 RPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVM 118 (486)
T ss_dssp GGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHH
T ss_pred HHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeCCCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHH
Confidence 46677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHH
Q psy1678 177 LDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERA 256 (297)
Q Consensus 177 ~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Ka 256 (297)
++|+++++|++..+.....+.++|+||+|||+||++|++++|+...++.+..+.++.+.+..++.+||+|+.+|+|+.|+
T Consensus 119 ~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~ 198 (486)
T 1js3_A 119 MDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERA 198 (486)
T ss_dssp HHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHH
T ss_pred HHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHH
Confidence 99999999998643211112346999999999999999999987554332221111110001356799999999999999
Q ss_pred HHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccEEc
Q psy1678 257 GLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFYI 297 (297)
Q Consensus 257 a~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~v 297 (297)
+.++|++++.||+|++|+||+++|+++|++++++|.+|++|
T Consensus 199 ~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~v 239 (486)
T 1js3_A 199 GLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFV 239 (486)
T ss_dssp HHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEE
Confidence 99999999999999999999999999999999999988765
No 4
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=3.1e-35 Score=286.38 Aligned_cols=225 Identities=22% Similarity=0.342 Sum_probs=188.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhhhhcc---CCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccc
Q psy1678 60 DVNEFKDFAKAMVDYVGNYLENIRDR--RVLPTVEPGYLRPL---IPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKF 134 (297)
Q Consensus 60 ~~e~f~~~l~~v~d~i~~~~~~~~~~--pv~~~~~p~~l~~~---~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~ 134 (297)
+.++++++++++++.+++|+++..++ +|.++..|++++.. ++..+|++|.+.+++++++.+.+.++ ..|+||+|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~p~f 98 (511)
T 3vp6_A 20 GEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG-VRTGHPRF 98 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS-CCTTSTTE
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhcc-CCCCCCCc
Confidence 34445555555555555555544332 46667778888887 88899999999999999999987766 56899999
Q ss_pred cccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHH
Q psy1678 135 HAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVAL 214 (297)
Q Consensus 135 ~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al 214 (297)
|||+++++.+++++++++++.+|+|...|..+|..+++|.++++|+++++|++.+. .+|+||+|||+||++|+
T Consensus 99 ~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~-------~~~~~t~ggt~a~~~al 171 (511)
T 3vp6_A 99 FNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-------GDGIFSPGGAISNMYSI 171 (511)
T ss_dssp ESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-------CEEEEESSHHHHHHHHH
T ss_pred eEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCC-------CceEECCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998531 47999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCC---ceEEeeCCCCCCcCHHHHHHHHHHHHHCC
Q psy1678 215 LGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGV---TIRGLPADDSYKLRGDALEAAIEEDLKKG 291 (297)
Q Consensus 215 ~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~---~v~~Vp~d~~~~md~~~L~~~i~~~~~~G 291 (297)
+++|++.+++.+..|. . ..++.+||+|+.+|+|+.|+++++|+ +++.||+|++|+||+++|+++|+++.++|
T Consensus 172 ~~a~~~~~~~~~~~G~--~---~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g 246 (511)
T 3vp6_A 172 MAARYKYFPEVKTKGM--A---AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKG 246 (511)
T ss_dssp HHHHHHHCTHHHHHCG--G---GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhhhhhcCc--c---cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcC
Confidence 9999976443333331 0 12577899999999999999999999 99999999999999999999999999999
Q ss_pred CccEEc
Q psy1678 292 KIPFYI 297 (297)
Q Consensus 292 ~~Pf~v 297 (297)
..|++|
T Consensus 247 ~~~~~v 252 (511)
T 3vp6_A 247 YVPFYV 252 (511)
T ss_dssp CEEEEE
T ss_pred CCcEEE
Confidence 988875
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=3.6e-34 Score=277.77 Aligned_cols=232 Identities=22% Similarity=0.331 Sum_probs=193.2
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q psy1678 13 SIIMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQMGSNIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVE 92 (297)
Q Consensus 13 ~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~l~~~~p~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~~~~ 92 (297)
.|-.||+++||+.+++|+|+|++|++++.+++ ++|.++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~ 51 (504)
T 2okj_A 12 LPAKNGEEQTVQFLLEVVDILLNYVRKTFDRS----------------------------------------TKVLDFHH 51 (504)
T ss_dssp TTSTTCHHHHHHHHHHHHHHHHHHHHHHTCTT----------------------------------------SCSCCCCC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHhhccCC----------------------------------------CCCCCCCC
Confidence 34458888888888888888888888777654 24555666
Q ss_pred hhhhhcc---CCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchh
Q psy1678 93 PGYLRPL---IPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPAC 169 (297)
Q Consensus 93 p~~l~~~---~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~ 169 (297)
|+++++. ++..+|++|.+.+++++++++.+.++. .+.||+|++|++++..+.+++++++++++|+|...|..+|..
T Consensus 52 p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~ 130 (504)
T 2okj_A 52 PHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGV-RTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVF 130 (504)
T ss_dssp HHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSC-CTTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHH
T ss_pred HHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccC-CCCCCCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHH
Confidence 7777777 788999999999999999988776555 556999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
+++|.++++|+++++|++.+ ..+|+||+|||+||++|++++|++.++..+..|. . ..++++|++|+.+
T Consensus 131 ~~le~~~~~~la~~~g~~~~-------~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~--~---~~~~~~v~~s~~~ 198 (504)
T 2okj_A 131 VLMEQITLKKMREIVGWSSK-------DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM--A---AVPKLVLFTSEQS 198 (504)
T ss_dssp HHHHHHHHHHHHHHHTCCSS-------SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG--G---GSCCEEEEEETTS
T ss_pred HHHHHHHHHHHHHHhCCCCC-------CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCc--c---ccCCeEEEECCcc
Confidence 99999999999999999831 1369999999999999999999865432211120 0 0135689999999
Q ss_pred cchHHHHHHhcCC---ceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccEEc
Q psy1678 250 HSSVERAGLLGGV---TIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFYI 297 (297)
Q Consensus 250 H~Si~Kaa~~lg~---~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~v 297 (297)
|+|+.|++.++|+ +++.||+|++|+||+++|+++|+++.++|..|++|
T Consensus 199 h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V 249 (504)
T 2okj_A 199 HYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYV 249 (504)
T ss_dssp CTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEE
Confidence 9999999999988 89999999999999999999999999999888765
No 6
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=5.8e-32 Score=263.16 Aligned_cols=227 Identities=19% Similarity=0.285 Sum_probs=199.2
Q ss_pred CCCCChHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCChhhhhccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCc
Q psy1678 56 NIMGDVNEFKDFAKAMVDYVGN-YLENIRD--RRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSP 132 (297)
Q Consensus 56 ~~p~~~e~f~~~l~~v~d~i~~-~~~~~~~--~pv~~~~~p~~l~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p 132 (297)
+.++++++|+++++++++.+.+ |+++..+ +||.++..|++++..++..+|++|.+.+++++++++.+.++. .+.||
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~p 109 (515)
T 2jis_A 31 SLAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSV-KTGHP 109 (515)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSC-CTTST
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCC-CCCCC
Confidence 3458999999999999999999 9988765 499999999999988899999999999999999988766555 55699
Q ss_pred cccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHH
Q psy1678 133 KFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLV 212 (297)
Q Consensus 133 ~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~ 212 (297)
+|++|++++..+.++++++++..+|+|...|..+|.++++|.++++|+++++|++. .+|+||+|||+||++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~---------~~~~~t~ggtea~~~ 180 (515)
T 2jis_A 110 RFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSS---------GDGIFCPGGSISNMY 180 (515)
T ss_dssp TEESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSS---------CEEEEESSHHHHHHH
T ss_pred CeEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCC---------CCeEEcCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999984 369999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCC---ceEEeeCCCCCCcCHHHHHHHHHHHHH
Q psy1678 213 ALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGV---TIRGLPADDSYKLRGDALEAAIEEDLK 289 (297)
Q Consensus 213 Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~---~v~~Vp~d~~~~md~~~L~~~i~~~~~ 289 (297)
|++++|++.++..+..|. ...++++|++|+.+|+|+.|++.++|+ +++.||+|++|+||+++|+++|+++.+
T Consensus 181 al~~ar~~~~~~~~~~G~-----~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~ 255 (515)
T 2jis_A 181 AVNLARYQRYPDCKQRGL-----RTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEA 255 (515)
T ss_dssp HHHHHHHHHCTTHHHHCG-----GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHhhcCc-----cccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHh
Confidence 999999865321111120 002467899999999999999999998 899999999999999999999999999
Q ss_pred CCCccEEc
Q psy1678 290 KGKIPFYI 297 (297)
Q Consensus 290 ~G~~Pf~v 297 (297)
+|..|++|
T Consensus 256 ~g~~~~~V 263 (515)
T 2jis_A 256 EGAVPFLV 263 (515)
T ss_dssp TTCEEEEE
T ss_pred CCCCcEEE
Confidence 99888765
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.6e-31 Score=258.80 Aligned_cols=239 Identities=16% Similarity=0.249 Sum_probs=204.6
Q ss_pred hhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhhccCCC-CCCCCCCCHHHHHHHHHHHHcCC
Q psy1678 47 LQRFSQMGSNIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPE-TAPDTPDTWQEVMSDIERVIMPG 125 (297)
Q Consensus 47 ~~v~p~l~~~~p~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~~~~p~~l~~~~~~-~lP~~g~~~~~il~~l~~~~~~~ 125 (297)
+.++..+-...+++.++|++.++.+++.+.+|+++.. +| .+...|+++++.++. .+|++|.+.+++++++.+.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 94 (497)
T 2qma_A 17 EEWKKHFIHTGELGSAEFASVMSHTTSAMKSVFEQVN-AP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKN 94 (497)
T ss_dssp HHHGGGBCCSSTTTTHHHHHHHHHHHHHHHHHHHHCC-SS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTT
T ss_pred chHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhhcc-CC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcC
Confidence 3344456667788999999999999999999999873 34 677789999988886 58999999999999999999999
Q ss_pred CCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCC
Q psy1678 126 VTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGT 205 (297)
Q Consensus 126 ~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsG 205 (297)
.++|+||+|++|+.+++.+++++++++...+|+|...|..+|+.+++|+++++|+++++|+++. ..|+||+|
T Consensus 95 ~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~--------~~~~~t~g 166 (497)
T 2qma_A 95 AIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEK--------ADGIFTSG 166 (497)
T ss_dssp SCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTT--------CEEEEESS
T ss_pred CCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCC--------CCeEEcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999752 36999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCC---CceEEEecCCCcchHHHHHHhcCC---ceEEeeCCCCCCcCHHH
Q psy1678 206 ASEATLVALLGAKAKTMQRVKEAHPDWKDSDII---ANLVGYCSDQAHSSVERAGLLGGV---TIRGLPADDSYKLRGDA 279 (297)
Q Consensus 206 GT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~---~~~~i~~s~~aH~Si~Kaa~~lg~---~v~~Vp~d~~~~md~~~ 279 (297)
||+||++|+++||++...+.. ++.....|.. ++.+|++|+.+|+|+.|++.++|+ +++.||+|++|+||+++
T Consensus 167 gt~a~~~al~~ar~~~~~~~~--~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~ 244 (497)
T 2qma_A 167 GTQSNQMGLMLARDWIADKLS--GHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITK 244 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--CCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGG
T ss_pred chHHHHHHHHHHHHHHHHhhc--ccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHH
Confidence 999999999999987553210 1110001111 356899999999999999999987 89999999999999999
Q ss_pred HHHHHHHHHHCCCccEEc
Q psy1678 280 LEAAIEEDLKKGKIPFYI 297 (297)
Q Consensus 280 L~~~i~~~~~~G~~Pf~v 297 (297)
|+++|+++.++|.+|++|
T Consensus 245 L~~~i~~~~~~~~~~~~v 262 (497)
T 2qma_A 245 LDEVIAQAKAEGLIPFAI 262 (497)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCcceEE
Confidence 999999998889877654
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.85 E-value=2e-20 Score=178.62 Aligned_cols=178 Identities=13% Similarity=0.093 Sum_probs=140.1
Q ss_pred hhhhhccCCCCCCCCCCCHHHHHHHHHHHH-cCCCCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhH
Q psy1678 93 PGYLRPLIPETAPDTPDTWQEVMSDIERVI-MPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTE 171 (297)
Q Consensus 93 p~~l~~~~~~~lP~~g~~~~~il~~l~~~~-~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~ 171 (297)
...++..++..+|++|.+.+++++++.+.+ .++..+++||+|++ ++.. ..+.+++..++|.|...|..+|.+.+
T Consensus 7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~---~~~~--~~v~e~~~~a~~~~~~~~~~~~~~~~ 81 (452)
T 2dgk_A 7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQ---TWDD--ENVHKLMDLSINKNWIDKEEYPQSAA 81 (452)
T ss_dssp --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC---CCCC--HHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeC---CCch--HHHHHHHHHHhccCCCChhhChhHHH
Confidence 334556677889999999999999999988 67787899999887 2222 35799999999999889999999999
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
+|.++.+|+++++|.+.+.. +..+|+||+|||+||++|++++|++...+.+..|.. ..+..|++|+ +|+
T Consensus 82 l~~~~~~~la~l~g~~~~~~----~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~------~~~~~vi~~~-~h~ 150 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKN----GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKP------TDKPNLVCGP-VQI 150 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTT----SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCC------CSCCEEEESS-CCH
T ss_pred HHHHHHHHHHHHhCCCcccc----cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCC------CCCcEEEECC-CcH
Confidence 99999999999999986310 012499999999999999999988654432222210 1234677888 999
Q ss_pred hHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 252 SVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 252 Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
|+.+++.++|++++.||+|+ +|+||+++|+++|++
T Consensus 151 ~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~ 186 (452)
T 2dgk_A 151 CWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDE 186 (452)
T ss_dssp HHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCT
T ss_pred HHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhh
Confidence 99999999999999999997 899999999999965
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.81 E-value=8.3e-19 Score=170.07 Aligned_cols=185 Identities=18% Similarity=0.182 Sum_probs=147.2
Q ss_pred CCCCCChhhhhccCCC-CCCCCCCCHHHHHHHHHHHHcCCCCCCCCcccc-ccCCCCCCHHHHHHHHHHHhccccccccc
Q psy1678 87 VLPTVEPGYLRPLIPE-TAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFH-AYFPTANSYPAIVADILSDSIACIGFTWI 164 (297)
Q Consensus 87 v~~~~~p~~l~~~~~~-~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~-g~~~s~~~~~svl~d~l~~~lN~n~~~~~ 164 (297)
..+.-.+.++++.++. .+|++|.+.+++++.+.+.+.. ..||+++ +.+.+. .+...+.+++..++|.|...|.
T Consensus 14 ~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l----~gnp~~~l~s~~t~-~~~~~v~~~l~~~~~~~~~~~~ 88 (502)
T 3hbx_A 14 VHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELML----DGNPRLNLASFVTT-WMEPECDKLIMSSINKNYVDMD 88 (502)
T ss_dssp CSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGG----SCCGGGBTTCCSCC-CCCHHHHHHHHHTTTCBTTCTT
T ss_pred ccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhcc----CCCCCceeccccCC-CCCHHHHHHHHHHhccCCCChh
Confidence 3344467888888887 9999999999999999987642 3568753 332222 2233578899999999999999
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
.+|.++++|.++++|+++++|++.+. .....|++|+|||+||+++++++++....+.+..|.. ..+..|+
T Consensus 89 ~~p~~~~le~~~~~~la~l~g~~~~~----~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~------~~~~~vi 158 (502)
T 3hbx_A 89 EYPVTTELQNRCVNMIAHLFNAPLEE----AETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP------VDKPNIV 158 (502)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCS----SCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCC------CSCCEEE
T ss_pred cChhHHHHHHHHHHHHHHHhCCCccc----ccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCC------CCCcEEE
Confidence 99999999999999999999998210 1124689999999999999999988766554433421 2345789
Q ss_pred ecCCCcchHHHHHHhcCCceEEeeCCCC-CCcCHHHHHHHHHH
Q psy1678 245 CSDQAHSSVERAGLLGGVTIRGLPADDS-YKLRGDALEAAIEE 286 (297)
Q Consensus 245 ~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~-~~md~~~L~~~i~~ 286 (297)
+|+.+|+|+.++++++|+.++.||++++ |+||+++|+++|++
T Consensus 159 ~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 201 (502)
T 3hbx_A 159 TGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDE 201 (502)
T ss_dssp EETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCT
T ss_pred EcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhh
Confidence 9999999999999999999999999876 99999999999875
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.5e-18 Score=164.68 Aligned_cols=169 Identities=16% Similarity=0.207 Sum_probs=142.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCccccccCCCCC-CHHHHHHHHHHHhccccccccccCchhhHHHHHHH
Q psy1678 100 IPETAPDTPDTWQEVMSDIERVIMP-GVTHWHSPKFHAYFPTAN-SYPAIVADILSDSIACIGFTWIASPACTELEVVML 177 (297)
Q Consensus 100 ~~~~lP~~g~~~~~il~~l~~~~~~-~~~~~~~p~~~g~~~s~~-~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~ 177 (297)
....+|++|.+.+++++++++.... ....|.+|+++|+++.++ ....++.+.+....+.|...|..+|...++|.++.
T Consensus 34 ~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (497)
T 3mc6_A 34 NFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVV 113 (497)
T ss_dssp CCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHH
Confidence 3468999999999999999998764 567899999999987664 44566677777777778888999999999999999
Q ss_pred HHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHH
Q psy1678 178 DWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAG 257 (297)
Q Consensus 178 ~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa 257 (297)
+|+++++|++.. ...++||+|||+||.+++.++|++...+ .| ..+..|+++..+|+++.+++
T Consensus 114 ~~la~~~g~~~~-------~~~~~~~~ggt~a~~~a~~a~~~~~~~~---~g--------~~~~~Vi~~~~~h~~~~~~~ 175 (497)
T 3mc6_A 114 SMVLRMFNAPSD-------TGCGTTTSGGTESLLLACLSAKMYALHH---RG--------ITEPEIIAPVTAHAGFDKAA 175 (497)
T ss_dssp HHHHHHTTCCTT-------TCCEEEESSHHHHHHHHHHHHHHHHHHH---SC--------CSSCEEEEETTSCHHHHHHH
T ss_pred HHHHHHhCCCCC-------CCeEEEcCcHHHHHHHHHHHHHHHHHhc---CC--------CCCceEEEeCCccHHHHHHH
Confidence 999999999821 1379999999999999999999875432 11 12347889999999999999
Q ss_pred HhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 258 LLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 258 ~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
.++|++++.||+|+ +|+||+++|+++|++
T Consensus 176 ~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 205 (497)
T 3mc6_A 176 YYFGMKLRHVELDPTTYQVDLGKVKKFINK 205 (497)
T ss_dssp HHSCCEEEEECBCTTTCSBCTTTTGGGCCS
T ss_pred HHcCCeEEEEecCcccCcCCHHHHHHHHhh
Confidence 99999999999998 899999999998864
No 11
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.76 E-value=2e-18 Score=164.40 Aligned_cols=154 Identities=11% Similarity=0.041 Sum_probs=120.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCC-----------------CccccccCCCCCCHHHHHHHHHHHhccccccccc
Q psy1678 102 ETAPDTPDTWQEVMSDIERVIMPGVTHWH-----------------SPKFHAYFPTANSYPAIVADILSDSIACIGFTWI 164 (297)
Q Consensus 102 ~~lP~~g~~~~~il~~l~~~~~~~~~~~~-----------------~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~ 164 (297)
..+|++|++.++|..+|.+.-......|. .||||||+++. ++.+||++. |. .|.
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~ 91 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA 91 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence 47999999999999999887655555552 36899999986 456788887 44 889
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChh-HHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS-EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVG 243 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT-~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i 243 (297)
.+|++..+|+.++.|+.+++|+|+. .+|++++||| ++++++|.+||+...+ .+.+|
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~--------~~~~lV~GaT~~~~a~~L~aar~~~~~---------------~~~vi 148 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSV--------ASCFVVPMATGMSLTLCFLTLRHKRPK---------------AKYII 148 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTC--------CEEEEESSCHHHHHHHHHHHHHHHCTT---------------CCEEE
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC--------ceEEEECCHHHHHHHHHHHHcchhhcC---------------CCEEE
Confidence 9999999999999999999999975 3589999998 9999999999884210 23344
Q ss_pred EecCCCcchHHHHHHhcCCceEEeeC---CCCCCcCHHHHHHHHHHHH
Q psy1678 244 YCSDQAHSSVERAGLLGGVTIRGLPA---DDSYKLRGDALEAAIEEDL 288 (297)
Q Consensus 244 ~~s~~aH~Si~Kaa~~lg~~v~~Vp~---d~~~~md~~~L~~~i~~~~ 288 (297)
++..+|.|+.||+.++|+..+.|++ ++.++||+++|+++|+++.
T Consensus 149 -v~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~ 195 (450)
T 3bc8_A 149 -WPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELG 195 (450)
T ss_dssp -EECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHC
T ss_pred -EECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcC
Confidence 4567999999999999997666654 7789999999999999875
No 12
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.74 E-value=7.4e-18 Score=163.37 Aligned_cols=169 Identities=15% Similarity=0.151 Sum_probs=145.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCC-CCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHH
Q psy1678 102 ETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTA-NSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWL 180 (297)
Q Consensus 102 ~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~-~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l 180 (297)
..+|++|.+.+++++++.+.+.++...|.+|+|+|+++.+ +.....+.+.+...++.|...+..+|....+|.++.+|+
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l 148 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT 148 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence 5789999999999999999988888889999999998765 456678889999999999999999999999999999999
Q ss_pred HHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhc
Q psy1678 181 GKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLG 260 (297)
Q Consensus 181 ~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~l 260 (297)
++++|++.+. ...+|+||+|||++|..+++++|+....+. | ..+..|+++..+|+++.+++..+
T Consensus 149 a~~~g~~~~~-----~~v~~~~t~ggt~a~~~al~a~~~~g~~~~---g--------~~~d~Vi~~~~~~~~~~~~~~~~ 212 (514)
T 3mad_A 149 AHMLGGDAAG-----GTVCGTVTSGGTESLLLAMKTYRDWARATK---G--------ITAPEAVVPVSAHAAFDKAAQYF 212 (514)
T ss_dssp HHHTTGGGGT-----SCCEEEEESSHHHHHHHHHHHHHHHHHHHH---C--------CSSCEEEEETTSCTHHHHHHHHH
T ss_pred HHHcCCCCcc-----CCcceEEcCcHHHHHHHHHHHHHHHhhhhc---C--------CCCCeEEEeCccchHHHHHHHHc
Confidence 9999998310 014689999999999999999988754321 2 23457889999999999999999
Q ss_pred CCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 261 GVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 261 g~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
|++++.||+|++|+||+++|+++|++
T Consensus 213 G~~v~~v~~~~~~~~d~~~Le~~i~~ 238 (514)
T 3mad_A 213 GIKLVRTPLDADYRADVAAMREAITP 238 (514)
T ss_dssp TCEEEEECBCTTSCBCHHHHHHHCCT
T ss_pred CCeeEEeeeCCCCCCCHHHHHHHhcc
Confidence 99999999999999999999999864
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=7.4e-14 Score=128.80 Aligned_cols=166 Identities=14% Similarity=0.059 Sum_probs=132.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHH
Q psy1678 103 TAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGK 182 (297)
Q Consensus 103 ~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~ 182 (297)
.+|+.|.+.+++++.+.+.. +....|.+|+|+|+..+++.+ . +.+.+...+..+...+...|....++.++.+|+++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVLP-I-TRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCCT-H-HHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCcH-H-HHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 57999999999999999875 455568889999999876654 3 35566666665544555667788999999999999
Q ss_pred HcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCC
Q psy1678 183 MLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGV 262 (297)
Q Consensus 183 llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~ 262 (297)
++|.+.. ..+||+|||++|..++.+++.....+.. .+. +..+.-.|+++..+|+++.+++..+|+
T Consensus 81 ~~~~~~~---------~i~~~~ggt~a~~~~~~~~~~~~~~~~~-~~~-----~~~~gd~vl~~~~~~~~~~~~~~~~g~ 145 (397)
T 3f9t_A 81 LLNNKDA---------YGHIVSGGTEANLMALRCIKNIWREKRR-KGL-----SKNEHPKIIVPITAHFSFEKGREMMDL 145 (397)
T ss_dssp HTTCTTC---------EEEEESCHHHHHHHHHHHHHHHHHHHHH-TTC-----CCCSSCEEEEETTCCTHHHHHHHHHTC
T ss_pred HhCCCCC---------CEEEecCcHHHHHHHHHHHHHHHHhhhh-hcc-----cCCCCeEEEECCcchhHHHHHHHHcCc
Confidence 9999763 5899999999999999999876433211 111 012344788899999999999999999
Q ss_pred ceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 263 TIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 263 ~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+++.||+|+++++|+++|+++|++
T Consensus 146 ~~~~v~~~~~~~~d~~~l~~~i~~ 169 (397)
T 3f9t_A 146 EYIYAPIKEDYTIDEKFVKDAVED 169 (397)
T ss_dssp EEEEECBCTTSSBCHHHHHHHHHH
T ss_pred eeEEEeeCCCCcCCHHHHHHHHhh
Confidence 999999999999999999999976
No 14
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.54 E-value=4.6e-14 Score=134.89 Aligned_cols=184 Identities=14% Similarity=0.078 Sum_probs=127.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhhccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccC
Q psy1678 59 GDVNEFKDFAKAMVDYVGNYLENIRDRRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYF 138 (297)
Q Consensus 59 ~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~~~~p~~l~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~ 138 (297)
+-+..|.+.++++++...+++++.- . ...+|++|.+.+++.+.+.+....... .|+.+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~--~~~lp~~g~~~~~i~~~~~~~~~~~~~-----~yld~a 87 (456)
T 2z67_A 29 LIPKNMEKRGELVLNEYLKEIEDVF--------------N--HRKIPENGIDDEKIKLFLKFLSMMDTD-----KDPKSV 87 (456)
T ss_dssp SSCHHHHHHHHHHHHHHTHHHHHHH--------------H--HCSCCSSCCCHHHHHHHHHHHHTTBGG-----GCTTCE
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhh--------------c--cCCCCCCCCCHHHHHHHHHHHHhcccc-----cccccc
Confidence 4467888888888887777666521 1 146788999999988887776443221 244333
Q ss_pred CCCCCHHHHHHHHHH--------------HhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcC
Q psy1678 139 PTANSYPAIVADILS--------------DSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQG 204 (297)
Q Consensus 139 ~s~~~~~svl~d~l~--------------~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~ts 204 (297)
..++.+..++..+.. ..+..|. .|..+|.+..+|.++.+|+++++|++. . ++||+
T Consensus 88 a~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~---------~-~~~t~ 156 (456)
T 2z67_A 88 RIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNV---------H-AIATP 156 (456)
T ss_dssp ECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC---------E-EEEES
T ss_pred ccccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC---------C-EEEeC
Confidence 222222221111111 1122333 566777889999999999999999975 2 99999
Q ss_pred Chh-HHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeC---CCCCCcCHHHH
Q psy1678 205 TAS-EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA---DDSYKLRGDAL 280 (297)
Q Consensus 205 GGT-~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~---d~~~~md~~~L 280 (297)
||| ++|+.++.++|.+. + .+ .|+++..+|+|+.++++..|+.++.||+ |++|++|+++|
T Consensus 157 g~te~a~~~al~~~~~~~-------~---------~~-~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l 219 (456)
T 2z67_A 157 ISTGMSISLCLSAARKKY-------G---------SN-VVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDI 219 (456)
T ss_dssp SCHHHHHHHHHHHHHHHH-------C---------CC-EEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHH
T ss_pred cHHHHHHHHHHHHHHHhc-------C---------CC-EEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHH
Confidence 999 67887888876531 1 12 3555667999999999999999998887 78899999999
Q ss_pred HHHHHHHHHCC
Q psy1678 281 EAAIEEDLKKG 291 (297)
Q Consensus 281 ~~~i~~~~~~G 291 (297)
+++|+++..++
T Consensus 220 ~~~i~~~~~~~ 230 (456)
T 2z67_A 220 ENAIKKEIELG 230 (456)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHhhCC
Confidence 99995444344
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.48 E-value=9.3e-13 Score=126.40 Aligned_cols=171 Identities=13% Similarity=0.056 Sum_probs=124.8
Q ss_pred hhhhhccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccc-cCchhhH
Q psy1678 93 PGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWI-ASPACTE 171 (297)
Q Consensus 93 p~~l~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~-~~p~~~~ 171 (297)
|+.++...+..+| +.+..++++++.+....+...+.+..++|. +.+...+.++..++..+.+.|..... .++...+
T Consensus 31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~-~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (474)
T 1wyu_B 31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLGS-CTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR 107 (474)
T ss_dssp CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBTT-TCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCcccccc-ccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence 3445433345688 789999999999987665544455667773 32333344554554443333333333 5788889
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
++.++.+|+++++|++. ..++|+|||++|+.|++++|.....+ |. . .++..|++++.+|.
T Consensus 108 l~~~l~~~la~~~g~~~----------~~~~~~ggt~a~~~al~~~~~~~~~~----Gd-~-----~~r~~Vlv~~~~h~ 167 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDA----------ITLEPAAGAHGELTGILIIRAYHEDR----GE-G-----RTRRVVLVPDSAHG 167 (474)
T ss_dssp HHHHHHHHHHHHHTCSE----------EECCCSSHHHHHHHHHHHHHHHHHHT----TC-T-----TTCCEEEEETTSCT
T ss_pred HHHHHHHHHHHHHCCCc----------eeecChHHHHHHHHHHHHHHHHHHhc----CC-c-----cCCCEEEEeCCcCh
Confidence 99999999999999975 37789999999999999998754321 10 0 13446778999999
Q ss_pred hHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 252 SVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 252 Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+..+++...|++++.||+|++|++|+++|+++|.+
T Consensus 168 ~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~ 202 (474)
T 1wyu_B 168 SNPATASMAGYQVREIPSGPEGEVDLEALKRELGP 202 (474)
T ss_dssp HHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCST
T ss_pred hhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCC
Confidence 99999999999999999999999999999999864
No 16
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=98.78 E-value=5.4e-08 Score=88.77 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=79.5
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
+..+.....+..++.+|+++++|.+++ ..++|+|||+++..++.+....... +.-.
T Consensus 35 ~~~~~~~~~~~~~~~~~la~~~~~~~~---------~i~~~~g~~~a~~~~~~~~~~~~~~---------------~gd~ 90 (382)
T 4hvk_A 35 HSYGFKAREAVQEAREKVAKLVNGGGG---------TVVFTSGATEANNLAIIGYAMRNAR---------------KGKH 90 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCTTE---------EEEEESSHHHHHHHHHHHHHHHHGG---------------GCCE
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCcC---------eEEEECCchHHHHHHHHHhhhhhcC---------------CCCE
Confidence 333345567777899999999999753 4899999999999999886532111 1225
Q ss_pred EEecCCCcchHHHHHHhc---CCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLG---GVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~l---g~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
|+++...|+++..++.++ |++++.||+|+++.+|+++|+++|++
T Consensus 91 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 137 (382)
T 4hvk_A 91 ILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD 137 (382)
T ss_dssp EEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT
T ss_pred EEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc
Confidence 778999999999988774 99999999999999999999998864
No 17
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=98.72 E-value=9.1e-08 Score=87.61 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=77.9
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
++.......++.+++++++|.+++ ..++|+|||+++..++.+.+.+... +.-.|++
T Consensus 38 ~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a~~~~~~~l~~~~~~---------------~gd~Vl~ 93 (382)
T 4eb5_A 38 GFKAREAVQEAREKVAKLVNGGGG---------TVVFTSGATEANNLAIIGYAMRNAR---------------KGKHILV 93 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTE---------EEEEESSHHHHHHHHHHHHHHHHGG---------------GCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC---------eEEEcCchHHHHHHHHHHHHhhccC---------------CCCEEEE
Confidence 344566777899999999998743 4899999999999999988643211 1125778
Q ss_pred cCCCcchHHHHHHh---cCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 246 SDQAHSSVERAGLL---GGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 246 s~~aH~Si~Kaa~~---lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
++.+|+++.+++.+ .|++++.||+|++|.+|+++|+++|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 137 (382)
T 4eb5_A 94 SAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD 137 (382)
T ss_dssp ETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT
T ss_pred CCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC
Confidence 89999999888875 588999999999999999999998864
No 18
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.65 E-value=2.8e-07 Score=87.59 Aligned_cols=156 Identities=11% Similarity=0.057 Sum_probs=101.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHH-HHHHHHHHH-------hccccccccccCc---h--
Q psy1678 102 ETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYP-AIVADILSD-------SIACIGFTWIASP---A-- 168 (297)
Q Consensus 102 ~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~-svl~d~l~~-------~lN~n~~~~~~~p---~-- 168 (297)
..+|++|++.+.|--.|.+.-..++.. |.+.+ +.++-+ -+...++.. .....+...+.=| +
T Consensus 39 r~~P~~g~~d~~ie~~l~~la~mdsnn-----~~~~~-g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGss 112 (501)
T 3hl2_A 39 GKCPENGWDESTLELFLHELAIMDSNN-----FLGNC-GVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSS 112 (501)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHTTBGGG-----CSSCC-CCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHH
T ss_pred CCCCccCCCHHHHHHHHHHHHhhccCC-----CcccC-CcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchH
Confidence 478999999888877777765544433 33332 111111 111222221 1222332222222 1
Q ss_pred --hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 169 --CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 169 --~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
...-|..+++||+.+ |+|.. +..++++|+|-+++..++++-....+ ..+ .|+++
T Consensus 113 ll~~ltn~l~ld~L~~~-G~~~~--------~~~flVnGsTgg~lamilaa~r~~rp--------------g~d-~VIvp 168 (501)
T 3hl2_A 113 LLNKITNSLVLDIIKLA-GVHTV--------ANCFVVPMATGMSLTLCFLTLRHKRP--------------KAK-YIIWP 168 (501)
T ss_dssp HHHHHHHHHHHHHHHHT-TCTTC--------CEEEEESSCHHHHHHHHHHHHHHHCT--------------TCC-EEEEE
T ss_pred HHHHHHHHHHHHHHHHc-CCCCC--------CcEEEECcHHHHHHHHHHHHcCcccC--------------CCC-EEEEe
Confidence 244588899999999 99974 35888999996666666665322110 012 45569
Q ss_pred CCCcchHHHHHHhcCCceEEeeC---CCCCCcCHHHHHHHHHHH
Q psy1678 247 DQAHSSVERAGLLGGVTIRGLPA---DDSYKLRGDALEAAIEED 287 (297)
Q Consensus 247 ~~aH~Si~Kaa~~lg~~v~~Vp~---d~~~~md~~~L~~~i~~~ 287 (297)
..+|.|+.||+.++|+..+.|+. ++.+.||+++|+++|++.
T Consensus 169 Rn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ 212 (501)
T 3hl2_A 169 RIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQEL 212 (501)
T ss_dssp CCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhc
Confidence 99999999999999999888876 557899999999999986
No 19
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=98.65 E-value=1.2e-07 Score=88.33 Aligned_cols=95 Identities=17% Similarity=0.105 Sum_probs=78.4
Q ss_pred hhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC
Q psy1678 168 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD 247 (297)
Q Consensus 168 ~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 247 (297)
.......++.+++++++|.+.+ ..+||+|||+|+..++.+.++...+ +.-.|+++.
T Consensus 65 ~~~~~~~~l~~~la~~~~~~~~---------~v~~~~ggt~a~~~a~~~l~~~~~~---------------~gd~Vl~~~ 120 (423)
T 3lvm_A 65 QAEEAVDIARNQIADLVGADPR---------EIVFTSGATESDNLAIKGAANFYQK---------------KGKHIITSK 120 (423)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHHHHHTT---------------TCCEEEEET
T ss_pred HHHHHHHHHHHHHHHHcCCCCC---------eEEEeCChHHHHHHHHHHHHHhhcc---------------CCCEEEECC
Confidence 4456667889999999999754 5899999999999999987764211 123577889
Q ss_pred CCcchHHHHHHhc---CCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 248 QAHSSVERAGLLG---GVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 248 ~aH~Si~Kaa~~l---g~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.+|+++..++..+ |++++.||+++++.+|+++|+++|++
T Consensus 121 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 162 (423)
T 3lvm_A 121 TEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD 162 (423)
T ss_dssp TSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT
T ss_pred ccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC
Confidence 9999999988666 99999999999999999999998864
No 20
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=98.61 E-value=4.3e-07 Score=85.66 Aligned_cols=152 Identities=12% Similarity=0.117 Sum_probs=96.2
Q ss_pred ChhhhhccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCCC----CHHHHHHHHH--HHhccc-cccccc
Q psy1678 92 EPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTAN----SYPAIVADIL--SDSIAC-IGFTWI 164 (297)
Q Consensus 92 ~p~~l~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~----~~~svl~d~l--~~~lN~-n~~~~~ 164 (297)
-|+.++.. +..+| +|.+..++++++.....++.. +|..+...+. .+ .++.+++ ...+.. +....+
T Consensus 30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~g~~~~~~p-~~v~~~~~~~~~~~~~~~~~~~ 101 (438)
T 1wyu_A 30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP-----AHKAFLGGGVRSHHVP-PVVQALAARGEFLTAYTPYQPE 101 (438)
T ss_dssp SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC-----CTTCCCCSSCCCCCCC-HHHHHHHTSHHHHHCCSCCSGG
T ss_pred CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC-----ccccccCCCccCCcCc-HHHHHHHhcchhhhcCCCCcch
Confidence 36666655 77899 889999999999887554321 1222222221 22 2333333 222222 122224
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
.++...+++.++.+++++++|.+.. .+++|+|||.++..++++.+. . ++-.|+
T Consensus 102 ~~~g~~~~~~~~~~~la~~~g~~~~---------~i~~~~g~taa~ea~~~a~~~---~---------------~gd~Vi 154 (438)
T 1wyu_A 102 VSQGVLQATFEYQTMIAELAGLEIA---------NASMYDGATALAEGVLLALRE---T---------------GRMGVL 154 (438)
T ss_dssp GCHHHHHHHHHHHHHHHHHHTSSEE---------CSCBSSHHHHHHHHHHHHHHH---H---------------TCCEEE
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCcc---------ceEEeCcHHHHHHHHHHHHhc---C---------------CCCEEE
Confidence 5778888999999999999999753 578999999433322222221 1 122577
Q ss_pred ecCCCcchHHHHH----HhcCCceEEeeCCCCCCcCHHH
Q psy1678 245 CSDQAHSSVERAG----LLGGVTIRGLPADDSYKLRGDA 279 (297)
Q Consensus 245 ~s~~aH~Si~Kaa----~~lg~~v~~Vp~d~~~~md~~~ 279 (297)
+++.+|+|...+. +..|++++.||+ ++|++|+++
T Consensus 155 v~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~ 192 (438)
T 1wyu_A 155 VSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE 192 (438)
T ss_dssp EETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC
T ss_pred EcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH
Confidence 8999999998655 558999999997 567777655
No 21
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=98.58 E-value=2.7e-07 Score=85.18 Aligned_cols=131 Identities=11% Similarity=0.046 Sum_probs=89.6
Q ss_pred cccccCCCCCCHHHHHH---HHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHH
Q psy1678 133 KFHAYFPTANSYPAIVA---DILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 209 (297)
Q Consensus 133 ~~~g~~~s~~~~~svl~---d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~a 209 (297)
.|+++-.+++.++.++. +.+...+.+....+..+.....+..++.+|+++++|.+++ ..++|+|||++
T Consensus 22 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---------~v~~~~g~t~a 92 (400)
T 3vax_A 22 TYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD---------ELIFTSGATES 92 (400)
T ss_dssp CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG---------GEEEESCHHHH
T ss_pred EEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC---------cEEEeCCHHHH
Confidence 45555444444444433 3333222221112333344456667799999999999754 58999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhc---CCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 210 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLG---GVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 210 nl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~l---g~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+..++.+.+.+.... .+..|+++...|+++..++..+ |.+++.||+++++.+|+++|+++|++
T Consensus 93 l~~~~~~l~~~~~~~--------------gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 158 (400)
T 3vax_A 93 NNIALLGLAPYGERT--------------GRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRP 158 (400)
T ss_dssp HHHHHHTTHHHHHHH--------------TCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCT
T ss_pred HHHHHHHHHHhhccC--------------CCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCC
Confidence 999999875432211 1214677889999998877764 88999999999999999999998854
No 22
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=98.57 E-value=2.8e-07 Score=83.45 Aligned_cols=107 Identities=18% Similarity=0.141 Sum_probs=82.7
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHh
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 227 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~ 227 (297)
+.+.+...+.. +..+.....+..++.+|+++++|.+.+ ..+||+|||++|..++.++++
T Consensus 30 v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~---------~v~~~~g~t~a~~~~~~~~~~-------- 88 (359)
T 1svv_A 30 ILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDA---------DVHFISGGTQTNLIACSLALR-------- 88 (359)
T ss_dssp HHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTS---------EEEEESCHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCc---------cEEEeCCchHHHHHHHHHHhC--------
Confidence 34445555442 223344567888899999999997653 589999999999999988632
Q ss_pred hCCCCCCcCCCCceEEEecCCCcchHHH--HHHhcCCceEEeeCCCCCCcCHHHHHHHHHHH
Q psy1678 228 AHPDWKDSDIIANLVGYCSDQAHSSVER--AGLLGGVTIRGLPADDSYKLRGDALEAAIEED 287 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~s~~aH~Si~K--aa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~ 287 (297)
+.-.|++++.+|++..+ .+...|.+++.||.+ ++.+|+++|+++|++.
T Consensus 89 -----------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~ 138 (359)
T 1svv_A 89 -----------PWEAVIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHEN 138 (359)
T ss_dssp -----------TTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHS
T ss_pred -----------CCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHH
Confidence 12267789999999988 478889999999997 7999999999999764
No 23
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=98.57 E-value=5e-07 Score=84.50 Aligned_cols=145 Identities=9% Similarity=0.031 Sum_probs=90.3
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcc--cc-ccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHH
Q psy1678 133 KFHAYFPTANSYPAIVADILSDSIA--CI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 209 (297)
Q Consensus 133 ~~~g~~~s~~~~~svl~d~l~~~lN--~n-~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~a 209 (297)
.|+++-.+++.++.++..+....-+ .+ ...+..++....+..++.+++++++|.+++ ..+||+|||++
T Consensus 20 ~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a 90 (432)
T 3a9z_A 20 VYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ---------DIIFTSGGTES 90 (432)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG---------GEEEESCHHHH
T ss_pred EEeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC---------eEEEeCChHHH
Confidence 4665554444444444333222211 11 122333444566778899999999998753 58999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCC--CCcCCCCceEEEecCCCcchHHHHHHh----cCCceEEeeCCC-CCCcCHHHHHH
Q psy1678 210 TLVALLGAKAKTMQRVKEAHPDW--KDSDIIANLVGYCSDQAHSSVERAGLL----GGVTIRGLPADD-SYKLRGDALEA 282 (297)
Q Consensus 210 nl~Al~~AR~~~~~~~~~~~~~~--~~~~~~~~~~i~~s~~aH~Si~Kaa~~----lg~~v~~Vp~d~-~~~md~~~L~~ 282 (297)
|..++.+..+.........|..+ ..++......|++|..+|+|+.++... .|.+++.||+++ ++.+|+++|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~ 170 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILA 170 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHH
T ss_pred HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHH
Confidence 99999988532211000011100 111111224788999999999776644 589999999986 89999999999
Q ss_pred HHHH
Q psy1678 283 AIEE 286 (297)
Q Consensus 283 ~i~~ 286 (297)
+|++
T Consensus 171 ~i~~ 174 (432)
T 3a9z_A 171 AVRP 174 (432)
T ss_dssp TCCT
T ss_pred hccC
Confidence 8853
No 24
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=98.52 E-value=7.1e-07 Score=81.55 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=75.2
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
......++.+++++++|.+.+ ..++|+|||+++..++.+.+.... .+.-.|++++.
T Consensus 42 ~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a~~~~~~~~~~~~~---------------~~gd~vl~~~~ 97 (384)
T 1eg5_A 42 ANLHMEKAREKVAKVLGVSPS---------EIFFTSCATESINWILKTVAETFE---------------KRKRTIITTPI 97 (384)
T ss_dssp HHHHHHHHHHHHHHHHTSCGG---------GEEEESCHHHHHHHHHHHHHHHTT---------------TTCCEEEECTT
T ss_pred HHHHHHHHHHHHHHHcCCCCC---------eEEEECCHHHHHHHHHHhhhhhcc---------------CCCCEEEECCC
Confidence 455667788999999998754 589999999999999998764210 01125778889
Q ss_pred CcchHHHHH---HhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 249 AHSSVERAG---LLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 249 aH~Si~Kaa---~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+|+++..++ ...|.+++.||+++++.+|+++|+++|++
T Consensus 98 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 138 (384)
T 1eg5_A 98 EHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE 138 (384)
T ss_dssp SCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT
T ss_pred CchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC
Confidence 999997776 66799999999999999999999998864
No 25
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=98.51 E-value=7.3e-07 Score=82.44 Aligned_cols=128 Identities=11% Similarity=0.018 Sum_probs=92.1
Q ss_pred CCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChh
Q psy1678 128 HWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 207 (297)
Q Consensus 128 ~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT 207 (297)
...+|.++-+.++|.....-+.+.+.. +... ..+|....+..++.+++++++|.+... ..++|+|||
T Consensus 8 ~~~~~~~~~~~pgp~~~~~~v~~a~~~---~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~--------~v~~~~sgt 74 (411)
T 3nnk_A 8 QLNPPSRLLMGPGPINADPRVLRAMSS---QLIG--QYDPAMTHYMNEVMALYRGVFRTENRW--------TMLVDGTSR 74 (411)
T ss_dssp SCCCCCCEEESSSCCCCCHHHHHHHTS---CCCC--TTCHHHHHHHHHHHHHHHHHHTCCCSE--------EEEEESCHH
T ss_pred ccCCccceeecCCCCCCCHHHHHHhhc---cccc--cccHHHHHHHHHHHHHHHHHhCCCCCc--------EEEECCCcH
Confidence 345676666666664433333333322 2111 224556677788999999999997531 367889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcch--HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 208 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSS--VERAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 208 ~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~S--i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
+++..++.+.. . +.-.|+++..+|++ +.+++...|++++.||++.++.+|+++|+++|+
T Consensus 75 ~al~~~~~~~~----~---------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 135 (411)
T 3nnk_A 75 AGIEAILVSAI----R---------------PGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVK 135 (411)
T ss_dssp HHHHHHHHHHC----C---------------TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhc----C---------------CCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHh
Confidence 99999888751 1 12256778899988 889999999999999999999999999999998
Q ss_pred HH
Q psy1678 286 ED 287 (297)
Q Consensus 286 ~~ 287 (297)
+.
T Consensus 136 ~~ 137 (411)
T 3nnk_A 136 RI 137 (411)
T ss_dssp HH
T ss_pred hC
Confidence 64
No 26
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=98.50 E-value=9.4e-07 Score=81.84 Aligned_cols=126 Identities=12% Similarity=0.051 Sum_probs=88.3
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeE-EcCChh
Q psy1678 129 WHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGV-IQGTAS 207 (297)
Q Consensus 129 ~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~-~tsGGT 207 (297)
..+|+++.+.+++......+.+.+.. . . ....++....+..++.+|+++++|.+.. ..+ +|+|||
T Consensus 7 ~~~~~~~~~~p~p~~~~~~v~~a~~~---~-~-~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~~~~~~~s~t 72 (416)
T 3isl_A 7 LCTPLRTIMTPGPVEVDPRVLRVMST---P-V-VGQFDPAFTGIMNETMEMLRELFQTKNR---------WAYPIDGTSR 72 (416)
T ss_dssp CCCCCCEECSSSSCCCCHHHHHHTTS---C-C-CCTTSHHHHHHHHHHHHHHHHHTTCCCS---------EEEEEESCHH
T ss_pred cCcccceeecCCCcCcCHHHHHHhcc---c-C-CCCccHHHHHHHHHHHHHHHHHhCCCCC---------cEEEecCcHH
Confidence 44556655555554333322222222 1 1 1223345567788899999999998753 244 889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcch--HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 208 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSS--VERAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 208 ~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~S--i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
+++..++.+. .. +.-.|+++..+|++ +.+++...|++++.||++.++.+|+++|+++|+
T Consensus 73 ~al~~~~~~l----~~---------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 133 (416)
T 3isl_A 73 AGIEAVLASV----IE---------------PEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIK 133 (416)
T ss_dssp HHHHHHHHHH----CC---------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHh----cC---------------CCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHh
Confidence 9998887764 11 12256677789998 888999999999999999999999999999998
Q ss_pred HH
Q psy1678 286 ED 287 (297)
Q Consensus 286 ~~ 287 (297)
+.
T Consensus 134 ~~ 135 (416)
T 3isl_A 134 KV 135 (416)
T ss_dssp HH
T ss_pred hC
Confidence 53
No 27
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=98.47 E-value=1.7e-07 Score=84.62 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=74.1
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
+|.....+.++.+++++++|.+... ...++|+|||+++..++.+.++ -.|++
T Consensus 28 ~~~~~~~~~~l~~~la~~~g~~~~~-------~~v~~t~g~t~a~~~~~~~~~~---------------------d~vl~ 79 (353)
T 2yrr_A 28 DPEVLRVNRAIQERLAALFDPGEGA-------LVAALAGSGSLGMEAGLANLDR---------------------GPVLV 79 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCTTC-------EEEEESSCHHHHHHHHHHTCSC---------------------CCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCC-------ceEEEcCCcHHHHHHHHHHhcC---------------------CcEEE
Confidence 5666677888999999999996110 1489999999999988876421 13566
Q ss_pred cCCCcch--HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 246 SDQAHSS--VERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 246 s~~aH~S--i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
++.+|++ +.+++...|++++.||+|+++.+|+++|+++|++
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 122 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKR 122 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHH
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHh
Confidence 7788988 4677788999999999999999999999999975
No 28
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=98.45 E-value=6.7e-07 Score=81.90 Aligned_cols=93 Identities=9% Similarity=0.054 Sum_probs=76.9
Q ss_pred CchhhHHHHHHHHHHHHHcCCC-ccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 166 SPACTELEVVMLDWLGKMLDLP-KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~-~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
++....+..++.+++++++|.+ .. ..++|+|||+++..++.+..+ +.-.|+
T Consensus 48 ~~~~~~~~~~~~~~la~~~g~~~~~---------~v~~~~g~t~a~~~~~~~l~~-------------------~gd~vl 99 (386)
T 2dr1_A 48 SKEYRKVHMDTVERLREFLEVEKGE---------VLLVPSSGTGIMEASIRNGVS-------------------KGGKVL 99 (386)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSSE---------EEEESSCHHHHHHHHHHHHSC-------------------TTCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc---------EEEEeCChHHHHHHHHHHhhc-------------------CCCeEE
Confidence 3445778888999999999997 22 488999999999999887511 112567
Q ss_pred ecCCCcch--HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 245 CSDQAHSS--VERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 245 ~s~~aH~S--i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+++.+|++ +.+++...|++++.||++.++.+|+++|+++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 143 (386)
T 2dr1_A 100 VTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRK 143 (386)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred EEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhc
Confidence 78889998 8899999999999999999999999999999965
No 29
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=98.44 E-value=1.2e-06 Score=80.75 Aligned_cols=94 Identities=15% Similarity=0.045 Sum_probs=77.0
Q ss_pred chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 167 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
+....+..++.+++++++|.+++ ...+||+|||+++..++.+..+ +.-.|+++
T Consensus 63 ~~~~~~~~~~~~~la~~~g~~~~--------~~v~~t~g~t~al~~~~~~~~~-------------------~gd~Vl~~ 115 (393)
T 1vjo_A 63 PAFLALMDEIQSLLRYVWQTENP--------LTIAVSGTGTAAMEATIANAVE-------------------PGDVVLIG 115 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCS--------CEEEESSCHHHHHHHHHHHHCC-------------------TTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCchHHHHHHHHHhccC-------------------CCCEEEEE
Confidence 44556777899999999999642 1389999999999999988621 11246677
Q ss_pred CCCcch--HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHH
Q psy1678 247 DQAHSS--VERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 287 (297)
Q Consensus 247 ~~aH~S--i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~ 287 (297)
+.+|++ +.+++...|.+++.||+++++.+|+++|+++|++.
T Consensus 116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 158 (393)
T 1vjo_A 116 VAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETH 158 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH
T ss_pred cCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhC
Confidence 889999 99999999999999999999999999999999763
No 30
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=98.38 E-value=2e-06 Score=79.06 Aligned_cols=122 Identities=12% Similarity=0.054 Sum_probs=84.9
Q ss_pred CccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHH
Q psy1678 131 SPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEAT 210 (297)
Q Consensus 131 ~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~an 210 (297)
++.|+.+-.+++.++.++ +.+...+.. ..++.......++.+++++++|.+++ ..++|+|||+++
T Consensus 8 ~~~yl~~~~~~~~~~~v~-~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~t~g~t~a~ 72 (392)
T 2z9v_A 8 DPVITLTAGPVNAYPEVL-RGLGRTVLY-----DYDPAFQLLYEKVVDKAQKAMRLSNK---------PVILHGEPVLGL 72 (392)
T ss_dssp CCSEECSSSCCCCCHHHH-HHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHTTCSSC---------CEEESSCTHHHH
T ss_pred CcceeecCCCcCCCHHHH-HHHhccccc-----cccHHHHHHHHHHHHHHHHHhCCCCC---------EEEEeCCchHHH
Confidence 445666554444444443 333333322 12344556667789999999998643 589999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchH--HHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 211 LVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSV--ERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 211 l~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si--~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
..++.+.. . +.-.|+++..+|++. .+.+...|.+++.||+|+++.+|+++|+++|++
T Consensus 73 ~~~~~~~~----~---------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 131 (392)
T 2z9v_A 73 EAAAASLI----S---------------PDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKA 131 (392)
T ss_dssp HHHHHHHC----C---------------TTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHhc----C---------------CCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhc
Confidence 99988761 1 111466778899886 344455799999999999999999999999975
No 31
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.37 E-value=1.3e-06 Score=80.12 Aligned_cols=126 Identities=9% Similarity=-0.043 Sum_probs=86.5
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHH
Q psy1678 130 HSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 209 (297)
Q Consensus 130 ~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~a 209 (297)
..|+++.+.+++...+..+.+.+.. +... ...|....+..++.+++++++|.+... ..+||+|||++
T Consensus 20 ~~~~~~~~~p~p~~~~~~v~~a~~~---~~~~--~~~~~~~~~~~~l~~~la~~~~~~~~~--------~v~~~~gg~~a 86 (393)
T 3kgw_A 20 SVPTRLLLGPGPSNLAPRVLAAGSL---RMIG--HMQKEMLQIMEEIKQGIQYVFQTRNPL--------TLVVSGSGHCA 86 (393)
T ss_dssp CCCCCEECSSSCCCCCHHHHHHTTC---CCCC--TTSHHHHHHHHHHHHHHHHHHTCCCSE--------EEEESCCTTTH
T ss_pred CCccceeccCCCCCCCHHHHHHhcc---cccC--cccHHHHHHHHHHHHHHHHHhCCCCCc--------EEEEeCCcHHH
Confidence 3456666666654333223333322 1111 123455667778899999999987531 37899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc--hHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHH
Q psy1678 210 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS--SVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 287 (297)
Q Consensus 210 nl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~--Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~ 287 (297)
+..++.+..+ +.-.|+++..+|| .+.+++...|.+++.+|++.++.+|+++|+++|++.
T Consensus 87 l~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~ 147 (393)
T 3kgw_A 87 METALFNLLE-------------------PGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQH 147 (393)
T ss_dssp HHHHHHHHCC-------------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhcCC-------------------CCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC
Confidence 9988886511 1123555667776 447888889999999999999999999999999863
No 32
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.34 E-value=1.2e-06 Score=80.09 Aligned_cols=130 Identities=8% Similarity=-0.063 Sum_probs=82.9
Q ss_pred ccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHH
Q psy1678 132 PKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL 211 (297)
Q Consensus 132 p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl 211 (297)
|+.+.+.+++......+.+.+...+.. + .+|.......++.++++++++..... .....+||+|||++|.
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~v~~~~g~t~al~ 73 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG----H-TSPEFVSIFQRVLKNTRAVFKSAAAS-----KSQPFVLAGSGTLGWD 73 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC----T-TSHHHHHHHHHHHHHHHHHTTCCGGG-----TCEEEEEESCTTHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc----c-CCHHHHHHHHHHHHHHHHHhCCCCCC-----CCceEEEcCchHHHHH
Confidence 344555555543333333333332221 1 25555555666888999999875210 0125899999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe-cCCCcchHHHHHHhcCCceEEeeC-CCCCCcCHHHHHHHHHH
Q psy1678 212 VALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC-SDQAHSSVERAGLLGGVTIRGLPA-DDSYKLRGDALEAAIEE 286 (297)
Q Consensus 212 ~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~-s~~aH~Si~Kaa~~lg~~v~~Vp~-d~~~~md~~~L~~~i~~ 286 (297)
.++.+.... .. ..+-+++. +..-|.++.+++...|++++.||+ ++++.+|+++|+++|++
T Consensus 74 ~~~~~~~~~-~~--------------~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~ 135 (385)
T 2bkw_A 74 IFASNFILS-KA--------------PNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQ 135 (385)
T ss_dssp HHHHHHSCT-TC--------------SCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHH
T ss_pred HHHHHHhcc-CC--------------CCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhc
Confidence 998875210 00 11223333 445566666788889999999999 88999999999999975
No 33
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=98.31 E-value=1.3e-06 Score=79.69 Aligned_cols=87 Identities=18% Similarity=0.161 Sum_probs=73.0
Q ss_pred HHHHHHHH-HHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc
Q psy1678 172 LEVVMLDW-LGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH 250 (297)
Q Consensus 172 iE~~v~~~-l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH 250 (297)
...++.++ +++++|.+ . .+||+|||+++..++.+... +.-.|++++.+|
T Consensus 54 ~~~~l~~~~la~~~~~~-~----------v~~~~g~t~a~~~~~~~~~~-------------------~gd~vl~~~~~~ 103 (371)
T 2e7j_A 54 PIHDFIHNQLPKFLGCD-V----------ARVTNGAREAKFAVMHSLAK-------------------KDAWVVMDENCH 103 (371)
T ss_dssp CHHHHHHTHHHHHTTSS-E----------EEEESSHHHHHHHHHHHHCC-------------------TTCEEEEETTCC
T ss_pred HHHHHHHHHHHHHcCCC-E----------EEEeCChHHHHHHHHHHHhC-------------------CCCEEEEccCcc
Confidence 44457778 99999986 3 89999999999999988621 122577899999
Q ss_pred chHHHHHHhcCCceEEee--CCCCCCcCHHHHHHHHHHHH
Q psy1678 251 SSVERAGLLGGVTIRGLP--ADDSYKLRGDALEAAIEEDL 288 (297)
Q Consensus 251 ~Si~Kaa~~lg~~v~~Vp--~d~~~~md~~~L~~~i~~~~ 288 (297)
++...++...|++++.|| +|+++.+|+++|+++|++..
T Consensus 104 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 143 (371)
T 2e7j_A 104 YSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETK 143 (371)
T ss_dssp HHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhc
Confidence 999999999999999999 88889999999999998653
No 34
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=98.31 E-value=2.5e-06 Score=78.46 Aligned_cols=94 Identities=10% Similarity=0.007 Sum_probs=72.9
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
+|.......++.+++++++|.+.. ...++|+|||++|..++.+..+ +.-.|++
T Consensus 47 ~~~~~~~~~~l~~~la~~~g~~~~--------~~i~~~~g~t~a~~~~~~~~~~-------------------~gd~vl~ 99 (393)
T 2huf_A 47 HPETLKIMDDIKEGVRYLFQTNNI--------ATFCLSASGHGGMEATLCNLLE-------------------DGDVILI 99 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCS--------EEEEESSCHHHHHHHHHHHHCC-------------------TTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEcCcHHHHHHHHHHHHhC-------------------CCCEEEE
Confidence 444556777899999999998642 1478999999999999887511 1124667
Q ss_pred cCCCcchH--HHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 246 SDQAHSSV--ERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 246 s~~aH~Si--~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+..+|++. .+.+...|.+++.||+++++.+|+++|+++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 142 (393)
T 2huf_A 100 GHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLI 142 (393)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhc
Confidence 77889884 345566899999999999999999999999975
No 35
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.30 E-value=1.7e-06 Score=78.92 Aligned_cols=94 Identities=14% Similarity=0.057 Sum_probs=74.1
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
++....+..++.+++++++|.+... ...+||+|||+++. ++.+. + .+.-.|++
T Consensus 30 ~~~~~~~~~~~~~~la~~~~~~~~~-------~~v~~~~g~t~al~-~~~~~----~---------------~~gd~vi~ 82 (384)
T 3zrp_A 30 SKEFVEALAYSLKGLRYVMGASKNY-------QPLIIPGGGTSAME-SVTSL----L---------------KPNDKILV 82 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTS-------EEEEEESCHHHHHH-HGGGG----C---------------CTTCEEEE
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCC-------cEEEEcCCcHHHHH-HHHhh----c---------------CCCCEEEE
Confidence 4555677788999999999997510 14899999999998 77543 1 01225667
Q ss_pred cCCCcch--HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 246 SDQAHSS--VERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 246 s~~aH~S--i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
++.+|++ +...+...|.+++.||++.++.+|+++|+++|++
T Consensus 83 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 125 (384)
T 3zrp_A 83 VSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRK 125 (384)
T ss_dssp ECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHH
T ss_pred ecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHh
Confidence 7889977 6677788899999999999999999999999976
No 36
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=98.30 E-value=5.7e-06 Score=76.51 Aligned_cols=93 Identities=13% Similarity=0.077 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHHHcCC-CccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 170 TELEVVMLDWLGKMLDL-PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~-~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
.....++.+++++++|. ++. ..++|+|||+++..++.+.+.... .+.-.|+++..
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~---------~v~~~~g~t~a~~~~~~~~~~~~~---------------~~gd~Vl~~~~ 126 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINARSPR---------EIVYTRNATEAINLVAYSWGMNNL---------------KAGDEIITTVM 126 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSCGG---------GEEEESSHHHHHHHHHHHTHHHHC---------------CTTCEEEEETT
T ss_pred HHHHHHHHHHHHHHcCCCCCC---------eEEEcCChHHHHHHHHHHhhhccc---------------CCCCEEEECcc
Confidence 44555688899999998 433 589999999999999998753211 11225778889
Q ss_pred Ccch----HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 249 AHSS----VERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 249 aH~S----i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+|++ +.+++...|++++.||+++++.+|+++|+++|++
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 168 (420)
T 1t3i_A 127 EHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE 168 (420)
T ss_dssp CCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT
T ss_pred hhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC
Confidence 9998 6778888999999999999999999999998854
No 37
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=98.30 E-value=2.9e-06 Score=78.10 Aligned_cols=95 Identities=12% Similarity=-0.002 Sum_probs=74.4
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
+|.......++.+++++++|.+.+ ...++|+|||+++..++.+..+ +.-.|++
T Consensus 46 ~~~~~~~~~~l~~~la~~~~~~~~--------~~v~~~~g~t~al~~~~~~~~~-------------------~gd~vl~ 98 (396)
T 2ch1_A 46 HAELFRTMDEVKDGLRYIFQTENR--------ATMCVSGSAHAGMEAMLSNLLE-------------------EGDRVLI 98 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCS--------CEEEESSCHHHHHHHHHHHHCC-------------------TTCEEEE
T ss_pred ChhHHHHHHHHHHHHHHHhCCCCC--------cEEEECCcHHHHHHHHHHHhcC-------------------CCCeEEE
Confidence 454445667789999999998752 1378999999999998887511 1114667
Q ss_pred cCCCcchHH--HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHH
Q psy1678 246 SDQAHSSVE--RAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 287 (297)
Q Consensus 246 s~~aH~Si~--Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~ 287 (297)
++.+|++.. +++...|.+++.||++.++.+|+++|+++|++.
T Consensus 99 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 142 (396)
T 2ch1_A 99 AVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELH 142 (396)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHH
T ss_pred EcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhC
Confidence 778898874 578889999999999999999999999999763
No 38
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=98.22 E-value=8.6e-06 Score=75.32 Aligned_cols=101 Identities=22% Similarity=0.087 Sum_probs=78.7
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|...+...++++.+.+|+.+..|++.+. ...++|+|||+++..++.+.++ +.-.
T Consensus 71 y~~~~~~~~l~~~la~~~~~~~g~~~~~-------~~v~~t~g~t~a~~~~~~~~~~-------------------~gd~ 124 (407)
T 2zc0_A 71 YTPANGIPELREELAAFLKKYDHLEVSP-------ENIVITIGGTGALDLLGRVLID-------------------PGDV 124 (407)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSCCCCCG-------GGEEEESHHHHHHHHHHHHHCC-------------------TTCE
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCc-------ceEEEecCHHHHHHHHHHHhcC-------------------CCCE
Confidence 4333456889999999999888964211 2589999999999999888631 1114
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHC
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKK 290 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~ 290 (297)
|++...+|+++..++...|.+++.||+++++ +|+++|+++|++...+
T Consensus 125 vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~ 171 (407)
T 2zc0_A 125 VITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAK 171 (407)
T ss_dssp EEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHT
T ss_pred EEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcc
Confidence 6678889999999999999999999998776 9999999999855444
No 39
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=98.20 E-value=4.7e-06 Score=75.39 Aligned_cols=118 Identities=14% Similarity=0.046 Sum_probs=80.8
Q ss_pred cccCCCCC-CHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHH
Q psy1678 135 HAYFPTAN-SYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVA 213 (297)
Q Consensus 135 ~g~~~s~~-~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~A 213 (297)
+.+.+++. .++.++..+...+.+........+|....+..++.+++++++|.++. ...++|+|||+++..+
T Consensus 6 ~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--------~~v~~~~g~t~al~~~ 77 (362)
T 3ffr_A 6 IYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSN--------YEVLFLASATEIWERI 77 (362)
T ss_dssp EEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTT--------EEEEEESCHHHHHHHH
T ss_pred eeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCCchHHHHHH
Confidence 33444443 33344444444444433222335677778888999999999999642 1588999999999988
Q ss_pred HHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcch--HHHHHHhcCCceEEeeCCCCCCcCHHHHH
Q psy1678 214 LLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSS--VERAGLLGGVTIRGLPADDSYKLRGDALE 281 (297)
Q Consensus 214 l~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~S--i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~ 281 (297)
+.+.. .+ .+++....||+ +...+...|++++.||++.++.+|+++|+
T Consensus 78 ~~~l~-------------------~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 126 (362)
T 3ffr_A 78 IQNCV-------------------EK--KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT 126 (362)
T ss_dssp HHHHC-------------------SS--EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC
T ss_pred HHhcc-------------------CC--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh
Confidence 87641 12 34445567777 34566778999999999999999999987
No 40
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.18 E-value=7.7e-06 Score=75.16 Aligned_cols=112 Identities=11% Similarity=0.001 Sum_probs=83.7
Q ss_pred HHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhh
Q psy1678 149 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEA 228 (297)
Q Consensus 149 ~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~ 228 (297)
.+.+...++.....|...+....+++.+.+|+.+.+|.+-+. ...++|+|||+++..++.+..+
T Consensus 49 ~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-------~~v~~~~g~~~a~~~~~~~~~~--------- 112 (388)
T 1j32_A 49 VEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-------DNILVTNGGKQSIFNLMLAMIE--------- 112 (388)
T ss_dssp HHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-------GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-------hhEEEcCCHHHHHHHHHHHhcC---------
Confidence 344444443322334444557889999999999999874211 2589999999999999887621
Q ss_pred CCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHHH
Q psy1678 229 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIEE 286 (297)
Q Consensus 229 ~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~~ 286 (297)
+.-.|+++..+|+++..++...|.+++.||+++ ++.+|+++|+++|++
T Consensus 113 ----------~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 162 (388)
T 1j32_A 113 ----------PGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP 162 (388)
T ss_dssp ----------TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT
T ss_pred ----------CCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc
Confidence 112577788999999999999999999999985 678999999998863
No 41
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=98.15 E-value=3.6e-05 Score=70.74 Aligned_cols=117 Identities=12% Similarity=-0.033 Sum_probs=79.1
Q ss_pred HHHHHHHHHH-hcccc-ccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCC--CeEEcCChhHHHHHHHHHHHHH
Q psy1678 145 PAIVADILSD-SIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG--GGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 145 ~svl~d~l~~-~lN~n-~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~--~G~~tsGGT~anl~Al~~AR~~ 220 (297)
+.+ .+.+.. .+... ...|...+....+.+.+.+|+....+.+-+ .. .-++|+|||+++..++...+..
T Consensus 47 ~~v-~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~-------~~~~~i~~t~g~~~a~~~~~~~~~~~ 118 (397)
T 3fsl_A 47 QAV-AEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK-------QQRVATIQTLGGSGALKVGADFLKRY 118 (397)
T ss_dssp HHH-HHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-------TTCEEEEEESHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc-------ccceEEEEcCCcHHHHHHHHHHHHhc
Confidence 444 444444 44432 233444455567777777777655442101 01 3789999999999887543221
Q ss_pred HHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeC--CCCCCcCHHHHHHHHHH
Q psy1678 221 TMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA--DDSYKLRGDALEAAIEE 286 (297)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~--d~~~~md~~~L~~~i~~ 286 (297)
. +.-.|+++.-+|.+...++...|.+++.||+ ++++.+|+++|++.|++
T Consensus 119 --~---------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 169 (397)
T 3fsl_A 119 --F---------------PESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKT 169 (397)
T ss_dssp --C---------------TTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTT
T ss_pred --C---------------CCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHh
Confidence 0 1114667889999999999999999999999 56899999999999874
No 42
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=98.15 E-value=4.5e-06 Score=77.13 Aligned_cols=93 Identities=10% Similarity=0.005 Sum_probs=70.5
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
......++.+++++++|.++. ..+||+|||+++..++.+.+.. . .+.-.|+++..
T Consensus 67 ~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~al~~~~~~l~~~-~---------------~~gd~vi~~~~ 121 (406)
T 3cai_A 67 SAAVLDAAREAVADLVNADPG---------GVVLGADRAVLLSLLAEASSSR-A---------------GLGYEVIVSRL 121 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCGG---------GEEEESCHHHHHHHHHHHTGGG-G---------------BTTCEEEEETT
T ss_pred HHHHHHHHHHHHHHHhCCCCC---------eEEEeCChHHHHHHHHHHHhhc-c---------------CCCCEEEEcCC
Confidence 455666788999999999753 5899999999988776643110 1 01125778889
Q ss_pred CcchHHHHHHh----cCCceEEeeCC-CCCCcCHHHHHHHHHH
Q psy1678 249 AHSSVERAGLL----GGVTIRGLPAD-DSYKLRGDALEAAIEE 286 (297)
Q Consensus 249 aH~Si~Kaa~~----lg~~v~~Vp~d-~~~~md~~~L~~~i~~ 286 (297)
+|.+...+... .|.+++.||++ ++|.+|+++|+++|++
T Consensus 122 ~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~ 164 (406)
T 3cai_A 122 DDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK 164 (406)
T ss_dssp SCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT
T ss_pred ccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC
Confidence 99987776654 69999999999 7899999999998853
No 43
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=98.15 E-value=1.4e-05 Score=73.35 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=83.4
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCC-CeEEcCChhHHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRVK 226 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~-~G~~tsGGT~anl~Al~~AR~~~~~~~~ 226 (297)
+.+.+...+......|...+....+++.+.+|+.+.+|.+-+ .. ..++|+|||+++..++.+.. .
T Consensus 48 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~----~--- 113 (386)
T 1u08_A 48 LQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPD-------ADSDITVTAGATEALYAAITALV----R--- 113 (386)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCC-------TTTTEEEESSHHHHHHHHHHHHC----C---
T ss_pred HHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCCEEEcCChHHHHHHHHHHhC----C---
Confidence 445555544432233444445688999999999999987521 12 58999999999998887741 0
Q ss_pred hhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHH
Q psy1678 227 EAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIE 285 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~ 285 (297)
+.-.|++++.+|+++..++...|.+++.||+++ ++.+|+++|+++|+
T Consensus 114 ------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~ 161 (386)
T 1u08_A 114 ------------NGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS 161 (386)
T ss_dssp ------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC
T ss_pred ------------CCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc
Confidence 112466778899999999999999999999986 68999999999884
No 44
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=98.14 E-value=1e-05 Score=74.30 Aligned_cols=93 Identities=15% Similarity=0.034 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHHHHcCC-CccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 170 TELEVVMLDWLGKMLDL-PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~-~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
.....++.+++++++|. ++. ..+||+|||+++..++.+.+.... .+.-.|+++..
T Consensus 66 ~~~~~~l~~~la~~~~~~~~~---------~v~~~~g~t~a~~~~~~~~~~~~~---------------~~gd~vl~~~~ 121 (406)
T 1kmj_A 66 TEKMENVRKRASLFINARSAE---------ELVFVRGTTEGINLVANSWGNSNV---------------RAGDNIIISQM 121 (406)
T ss_dssp HHHHHHHHHHHHHHTTCSCGG---------GEEEESSHHHHHHHHHHHTHHHHC---------------CTTCEEEEETT
T ss_pred HHHHHHHHHHHHHHcCCCCCC---------eEEEeCChhHHHHHHHHHhhhhcC---------------CCCCEEEEecc
Confidence 44556788899999998 332 589999999999999998864211 01225677888
Q ss_pred CcchHH----HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 249 AHSSVE----RAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 249 aH~Si~----Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+|++.. ..+...|.+++.||+++++.+|+++|+++|++
T Consensus 122 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~ 163 (406)
T 1kmj_A 122 EHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE 163 (406)
T ss_dssp CCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT
T ss_pred cchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc
Confidence 887653 45677899999999999999999999998853
No 45
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=98.14 E-value=6.9e-06 Score=75.78 Aligned_cols=95 Identities=13% Similarity=0.087 Sum_probs=70.9
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
..+...++|+ .+++++|.+. .+||++||+||..++.+++.+.. . +..+.-.|+
T Consensus 32 ~~~~~~~l~~----~la~~~~~~~-----------~i~~~sGt~a~~~al~~~~~~~~-------~-----~~~~g~~Vi 84 (390)
T 3b8x_A 32 MGEYVKQYET----QFAKTFGSKY-----------AVMVSSGSTANLLMIAALFFTKK-------P-----RLKKGDEII 84 (390)
T ss_dssp SCHHHHHHHH----HHHHHHTCSE-----------EEEESCHHHHHHHHHHHTTSSSS-------C-----SCCTTCEEE
T ss_pred CChHHHHHHH----HHHHHHCCCc-----------EEEECCHHHHHHHHHHHHHhhhh-------c-----CCCCcCEEE
Confidence 3445555554 5666777752 79999999999999988642100 0 001223577
Q ss_pred ecCCCcchHHHHHHhcCCceEEeeCCCC-CCcCHHHHHHHHHH
Q psy1678 245 CSDQAHSSVERAGLLGGVTIRGLPADDS-YKLRGDALEAAIEE 286 (297)
Q Consensus 245 ~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~-~~md~~~L~~~i~~ 286 (297)
++..+|.++..++...|.+++.+|+|++ +.+|+++|+++|++
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~ 127 (390)
T 3b8x_A 85 VPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD 127 (390)
T ss_dssp EESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc
Confidence 8999999999999999999999999975 99999999998864
No 46
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.14 E-value=5.9e-06 Score=76.27 Aligned_cols=99 Identities=11% Similarity=0.022 Sum_probs=78.2
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|...+....+...+.+|+++.+|.+-+. ....+||+|||++|..++.+... +.-.
T Consensus 74 y~~~~g~~~l~~~l~~~l~~~~g~~~~~------~~~i~~~~g~~~a~~~~~~~l~~-------------------~gd~ 128 (407)
T 3nra_A 74 YTEYRGDLGIRDLLAPRLAAFTGAPVDA------RDGLIITPGTQGALFLAVAATVA-------------------RGDK 128 (407)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHTSCCCT------TTSEEEESHHHHHHHHHHHTTCC-------------------TTCE
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCCCC------CCcEEEeCCcHHHHHHHHHHhCC-------------------CCCE
Confidence 4444556788889999999999985210 02589999999999988875310 1125
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeC------CCCCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPA------DDSYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~------d~~~~md~~~L~~~i~~ 286 (297)
|+++..+|.++..++...|.+++.+|+ ++++.+|+++|+++|++
T Consensus 129 vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 178 (407)
T 3nra_A 129 VAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA 178 (407)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT
T ss_pred EEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh
Confidence 777889999999999999999999999 47899999999999975
No 47
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=98.12 E-value=7.6e-06 Score=75.22 Aligned_cols=113 Identities=15% Similarity=0.100 Sum_probs=82.9
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCC-eEEcCChhHHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGG-GVIQGTASEATLVALLGAKAKTMQRVK 226 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~-G~~tsGGT~anl~Al~~AR~~~~~~~~ 226 (297)
+.+.+...+......|...+....+++.+.+|+.+.+|.+-+ ... .++|+|||+++..++.+..+
T Consensus 44 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~~------- 109 (389)
T 1gd9_A 44 IKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEAD-------PKTEIMVLLGANQAFLMGLSAFLK------- 109 (389)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------TTTSEEEESSTTHHHHHHHTTTCC-------
T ss_pred HHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------CCCeEEEcCChHHHHHHHHHHhCC-------
Confidence 344444444332223444445788999999999999896421 026 89999999999988876410
Q ss_pred hhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHHH
Q psy1678 227 EAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIEE 286 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~~ 286 (297)
+.-.|++++.+|+++..++...|.+++.||+++ .+.+|+++|+++|++
T Consensus 110 ------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 159 (389)
T 1gd9_A 110 ------------DGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD 159 (389)
T ss_dssp ------------TTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT
T ss_pred ------------CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc
Confidence 112567788999999999999999999999985 468999999998864
No 48
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=98.12 E-value=2.7e-06 Score=76.92 Aligned_cols=87 Identities=15% Similarity=0.115 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+|+++++| ++ ...+||+|||++|..++.++++ +.-.|+++...
T Consensus 42 ~~~~~~l~~~la~~~g-~~---------~~v~~~~~gt~a~~~al~~~~~-------------------~gd~vi~~~~~ 92 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RD---------VEVFLVPTGTAANALCLSAMTP-------------------PWGNIYCHPAS 92 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SC---------CEEEEESCHHHHHHHHHHTSCC-------------------TTEEEEECTTS
T ss_pred chHHHHHHHHHHHHhC-CC---------CcEEEeCCccHHHHHHHHHhcC-------------------CCCEEEEcCcc
Confidence 4567778899999999 43 1379999999999998887532 12357778899
Q ss_pred cchHHHH--HHhc--CCceEEeeCCCCCCcCHHHHHH-HHHH
Q psy1678 250 HSSVERA--GLLG--GVTIRGLPADDSYKLRGDALEA-AIEE 286 (297)
Q Consensus 250 H~Si~Ka--a~~l--g~~v~~Vp~d~~~~md~~~L~~-~i~~ 286 (297)
|++..++ +..+ |..++.||++ ++.+|+++|++ +|++
T Consensus 93 ~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~ 133 (356)
T 1v72_A 93 HINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREK 133 (356)
T ss_dssp HHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSS
T ss_pred chhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhc
Confidence 9998877 7877 9999999986 58999999999 8864
No 49
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=98.12 E-value=3e-05 Score=74.53 Aligned_cols=110 Identities=10% Similarity=-0.014 Sum_probs=87.2
Q ss_pred ccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCC
Q psy1678 160 GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 239 (297)
Q Consensus 160 ~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~ 239 (297)
...|..++....+++.+.+|+.+..|++-.. ..-++|+|||+++..++.+... .+
T Consensus 127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-------~~i~~t~G~~~al~~~~~~l~~------------------~~ 181 (500)
T 3tcm_A 127 TGAYSHSQGIHGLRDAIASGIASRDGFPANA-------DDIFLTDGASPGVHLMMQLLIR------------------NE 181 (500)
T ss_dssp SSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG-------GGEEEESSSHHHHHHHHHHHCC------------------ST
T ss_pred CCCcCCCcChHHHHHHHHHHHHhhcCCCCCc-------ccEEEcCCHHHHHHHHHHHHcC------------------CC
Confidence 3456666777889999999999988875321 2589999999999888876410 01
Q ss_pred ceEEEecCCCcchHHHHHHhcCCceEEeeCCCC--CCcCHHHHHHHHHHHHHCCCcc
Q psy1678 240 NLVGYCSDQAHSSVERAGLLGGVTIRGLPADDS--YKLRGDALEAAIEEDLKKGKIP 294 (297)
Q Consensus 240 ~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~--~~md~~~L~~~i~~~~~~G~~P 294 (297)
.-.|+++.-.|+++..++...|.+++.+|+|++ +.+|+++|+++|++...+|..|
T Consensus 182 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 238 (500)
T 3tcm_A 182 KDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINV 238 (500)
T ss_dssp TEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCc
Confidence 235778899999999999999999999999864 5999999999999887776544
No 50
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.08 E-value=1.4e-05 Score=73.70 Aligned_cols=113 Identities=12% Similarity=0.011 Sum_probs=83.9
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHh
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 227 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~ 227 (297)
+.+.+...+......|...+...++++.+.+|+.+..|.+-+. ...++|+|||+++..++.+..+
T Consensus 59 v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-------~~v~~~~g~t~al~~~~~~l~~-------- 123 (389)
T 1o4s_A 59 VVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-------DQVVVTNGAKQALFNAFMALLD-------- 123 (389)
T ss_dssp HHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-------GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-------HHEEEecCHHHHHHHHHHHhCC--------
Confidence 3445555554333344444567889999999999988874110 2589999999999998877511
Q ss_pred hCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHHH
Q psy1678 228 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIEE 286 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~~ 286 (297)
+.-.|++++.+|+++..++...|.+++.||.++ ++.+|+++|+++|++
T Consensus 124 -----------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 173 (389)
T 1o4s_A 124 -----------PGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG 173 (389)
T ss_dssp -----------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT
T ss_pred -----------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc
Confidence 112467788899999999999999999999985 578999999998854
No 51
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=98.08 E-value=1.6e-05 Score=76.58 Aligned_cols=121 Identities=10% Similarity=-0.004 Sum_probs=77.7
Q ss_pred CChHHHHHHHHHHHHHHHH-HHhhhhhc--chhhhhccc-----cCCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy1678 17 GDVNEFKDFAKAMVDYVGN-YLENIRDR--YVQLQRFSQ-----MGSNIMGDVNEFKDFAKAMVDYVGNYLENIRDRRVL 88 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~-y~~~~~~~--~v~~~v~p~-----l~~~~p~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~ 88 (297)
||+++||+.+++|+|+|+| |++++.++ ||.|.++|+ ++...|..+..++++++++.+. .. . .+.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~-~~---~----~~~ 105 (515)
T 2jis_A 34 GDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAV-IR---Y----SVK 105 (515)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHH-HH---H----SCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHH-hc---C----CCC
Confidence 9999999999999999999 99999865 999999997 5666777777777777775443 22 1 121
Q ss_pred CCCChhhhhccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCC--CCHHHHHHHHHHHhcccc
Q psy1678 89 PTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTA--NSYPAIVADILSDSIACI 159 (297)
Q Consensus 89 ~~~~p~~l~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~--~~~~svl~d~l~~~lN~n 159 (297)
. .+|.++ ...+ .+.....++.++..... .+..++|..++ ......+.++++.+++..
T Consensus 106 ~-~~p~~~-~~~~-----~~~~~~~~~~~~l~~~~-------n~~~~~~~~s~~~~~le~~~~~~la~l~g~~ 164 (515)
T 2jis_A 106 T-GHPRFF-NQLF-----SGLDPHALAGRIITESL-------NTSQYTYEIAPVFVLMEEEVLRKLRALVGWS 164 (515)
T ss_dssp T-TSTTEE-SSSC-----CCCCHHHHHHHHHHHHH-------CCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS
T ss_pred C-CCCCeE-EEee-----CCCCHHHHHHHHHHHHh-------ccCCCchhhchHHHHHHHHHHHHHHHHhCCC
Confidence 1 245555 2222 23456666665544321 12223333333 233456678899888864
No 52
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.08 E-value=2.4e-05 Score=74.08 Aligned_cols=114 Identities=17% Similarity=0.150 Sum_probs=82.4
Q ss_pred HHHHHHHHhccccc---cccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHH
Q psy1678 147 IVADILSDSIACIG---FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQ 223 (297)
Q Consensus 147 vl~d~l~~~lN~n~---~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~ 223 (297)
.+.+.+...+.... ..|...+....+++.+.+|+.+..|.+ +. ...++|+|||+++..++.+..+
T Consensus 95 ~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~-------~~v~~t~G~~~al~~~~~~l~~---- 162 (448)
T 3aow_A 95 IIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QD-------NDIMITSGSQQALDLIGRVFLN---- 162 (448)
T ss_dssp HHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TT-------SEEEEESSHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-Ch-------hhEEEeCcHHHHHHHHHHHHcC----
Confidence 34444444443321 234334456788888888888888984 21 2589999999999988877421
Q ss_pred HHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHH
Q psy1678 224 RVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 288 (297)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~ 288 (297)
+.-.|++.+-+|++...++...|.+++.||+|++| +|+++|+++|+.+.
T Consensus 163 ---------------~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~ 211 (448)
T 3aow_A 163 ---------------PGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELK 211 (448)
T ss_dssp ---------------TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHH
T ss_pred ---------------CCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhh
Confidence 11246678889999999999999999999998876 99999999997443
No 53
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.07 E-value=3.8e-06 Score=75.77 Aligned_cols=89 Identities=13% Similarity=0.037 Sum_probs=69.9
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
++.......++.+++++++|.+++ ..++|+|||++|..++.+..+ +.-.|++
T Consensus 29 ~~~~~~~~~~l~~~la~~~g~~~~---------~i~~~~g~t~a~~~~~~~~~~-------------------~gd~vl~ 80 (352)
T 1iug_A 29 TEAAREVFLKARGLLREAFRTEGE---------VLILTGSGTLAMEALVKNLFA-------------------PGERVLV 80 (352)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSE---------EEEEESCHHHHHHHHHHHHCC-------------------TTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCc---------eEEEcCchHHHHHHHHHhccC-------------------CCCeEEE
Confidence 455556667899999999998743 589999999999999887521 1125677
Q ss_pred cCCCcchHH--HHHHhcCCceEEeeCCCCCCcCHHHHHH
Q psy1678 246 SDQAHSSVE--RAGLLGGVTIRGLPADDSYKLRGDALEA 282 (297)
Q Consensus 246 s~~aH~Si~--Kaa~~lg~~v~~Vp~d~~~~md~~~L~~ 282 (297)
+..+|++.. +.+...|.+++.||+++++.+|+++|++
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~ 119 (352)
T 1iug_A 81 PVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK 119 (352)
T ss_dssp EECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC
T ss_pred EeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc
Confidence 888999975 4455579999999999999999998876
No 54
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=98.05 E-value=1.6e-05 Score=74.10 Aligned_cols=86 Identities=14% Similarity=0.064 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
+-.++.+++++++|.+. .+++++||+++..++.+.+ . .+.-.|+++..+|+
T Consensus 43 l~~~l~~~la~~~g~~~-----------~i~~~~gt~al~~~~~~~~---~---------------~~gd~Vl~~~~~~~ 93 (418)
T 2c81_A 43 MERKFAKAFADFNGVPY-----------CVPTTSGSTALMLALEALG---I---------------GEGDEVIVPSLTWI 93 (418)
T ss_dssp HHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHTT---C---------------CTTCEEEEESSSCT
T ss_pred HHHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHcC---C---------------CCcCEEEECCCccH
Confidence 34456678889999863 7889999999999888752 0 01125778899999
Q ss_pred hHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 252 SVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 252 Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
+...++...|.+++.||+++ ++.+|+++|+++|++
T Consensus 94 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~ 129 (418)
T 2c81_A 94 ATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITD 129 (418)
T ss_dssp HHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT
T ss_pred hHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC
Confidence 99999999999999999986 899999999988853
No 55
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=98.05 E-value=1.6e-05 Score=72.80 Aligned_cols=110 Identities=11% Similarity=0.065 Sum_probs=80.6
Q ss_pred HHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhh
Q psy1678 149 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEA 228 (297)
Q Consensus 149 ~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~ 228 (297)
.+.+...+......+. +....++.++.+|+++++|.+-.. ..-++|+|||+++..++.+..+
T Consensus 51 ~~a~~~~~~~~~~~y~--~~~~~~~~~l~~~l~~~~g~~~~~-------~~v~~~~g~~~a~~~~~~~~~~--------- 112 (391)
T 4dq6_A 51 IDSLKNRLEQEIYGYT--TRPDSYNESIVNWLYRRHNWKIKS-------EWLIYSPGVIPAISLLINELTK--------- 112 (391)
T ss_dssp HHHHHHHHTTCCCCCB--CCCHHHHHHHHHHHHHHHCCCCCG-------GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHhCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCcH-------HHeEEcCChHHHHHHHHHHhCC---------
Confidence 4444444443332332 334788889999999999943210 2589999999999998887521
Q ss_pred CCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCC--C--CCCcCHHHHHHHHHH
Q psy1678 229 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPAD--D--SYKLRGDALEAAIEE 286 (297)
Q Consensus 229 ~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d--~--~~~md~~~L~~~i~~ 286 (297)
+.-.|+++..+|.++..++...|.+++.||++ + ++.+|+++|+++|++
T Consensus 113 ----------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 164 (391)
T 4dq6_A 113 ----------ANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD 164 (391)
T ss_dssp ----------TTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT
T ss_pred ----------CCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc
Confidence 11256788899999999999999999999988 3 446999999998865
No 56
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.04 E-value=4.1e-05 Score=70.99 Aligned_cols=136 Identities=13% Similarity=0.042 Sum_probs=89.8
Q ss_pred CCCCCCCccccccCCCCCCHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcC
Q psy1678 125 GVTHWHSPKFHAYFPTANSYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQG 204 (297)
Q Consensus 125 ~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~ts 204 (297)
....+.++.+.+.-...+.++. +.+.+....+.....|...+....+.+.+.+|+....+.... ...++|+
T Consensus 38 ~~i~l~~g~~~~~~~~~~~~~~-v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~--------~~i~~t~ 108 (413)
T 3t18_A 38 AVINAALGTLLDDKGKIIALPS-VYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGY--------ISAIATP 108 (413)
T ss_dssp GCEECCSCCCBCTTSCBCCCHH-HHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE--------EEEEEES
T ss_pred ceEeccccCccCCCCCcCChHH-HHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCcccc--------CcEEEcC
Confidence 3445555555443222223333 344454433222233444445667788888888777654311 1589999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeC-CCCCCcCHHHHHHH
Q psy1678 205 TASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA-DDSYKLRGDALEAA 283 (297)
Q Consensus 205 GGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~-d~~~~md~~~L~~~ 283 (297)
|||+++..++.+..+ +.-.|+++.-+|.+...++...|.+++.+|+ ++++.+|+++|+++
T Consensus 109 g~~~al~~~~~~~~~-------------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~ 169 (413)
T 3t18_A 109 GGTGAIRSAIFSYLD-------------------EGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEA 169 (413)
T ss_dssp HHHHHHHHHHHHHCC-------------------SSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHH
T ss_pred ccHHHHHHHHHHhcC-------------------CCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHH
Confidence 999999988875311 1124667788999999999999999999999 56689999999999
Q ss_pred HHHHH
Q psy1678 284 IEEDL 288 (297)
Q Consensus 284 i~~~~ 288 (297)
|++..
T Consensus 170 l~~~~ 174 (413)
T 3t18_A 170 IDEGI 174 (413)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98643
No 57
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=98.00 E-value=1.2e-05 Score=74.64 Aligned_cols=112 Identities=17% Similarity=0.140 Sum_probs=83.0
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCC-CeEEcCChhHHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRVK 226 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~-~G~~tsGGT~anl~Al~~AR~~~~~~~~ 226 (297)
+.+.+...+......|...+....+++.+.+|+.+.+|.+.. .. ..++|+|||+++..++.+..+
T Consensus 43 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~~v~~t~g~~~al~~~~~~~~~------- 108 (411)
T 2o0r_A 43 MLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYD-------PETEVLVTVGATEAIAAAVLGLVE------- 108 (411)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------TTTSEEEEEHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC-------CCceEEEeCCHHHHHHHHHHHhcC-------
Confidence 344444444432233444445678999999999999997522 12 589999999999998877521
Q ss_pred hhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCC---CCcCHHHHHHHHH
Q psy1678 227 EAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDS---YKLRGDALEAAIE 285 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~---~~md~~~L~~~i~ 285 (297)
+.-.|+++..+|+++..++...|.+++.||++++ +.+|+++|+++|+
T Consensus 109 ------------~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~ 158 (411)
T 2o0r_A 109 ------------PGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT 158 (411)
T ss_dssp ------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC
T ss_pred ------------CCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc
Confidence 1125677889999999999999999999999753 7899999999885
No 58
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=98.00 E-value=3e-05 Score=70.93 Aligned_cols=109 Identities=9% Similarity=-0.007 Sum_probs=80.2
Q ss_pred HHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhh
Q psy1678 149 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEA 228 (297)
Q Consensus 149 ~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~ 228 (297)
.+.+...+......+. +....++..+.+|+++.+|++-+. ..-+||+|||+++..++.+...
T Consensus 46 ~~a~~~~~~~~~~~y~--~~~~~l~~~la~~l~~~~g~~~~~-------~~i~~~~g~~~a~~~~~~~l~~--------- 107 (391)
T 3dzz_A 46 MASMEEKLKVAAFGYE--SVPAEYYKAVADWEEIEHRARPKE-------DWCVFASGVVPAISAMVRQFTS--------- 107 (391)
T ss_dssp HHHHHHHHTTCCCCCB--CCCHHHHHHHHHHHHHHHSCCCCG-------GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHHHhcCcCCCC--CCCHHHHHHHHHHHHHHhCCCCCH-------HHEEECCCHHHHHHHHHHHhCC---------
Confidence 3444444443322232 225788899999999999954211 2589999999999998887511
Q ss_pred CCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCC---CCCCcCHHHHHHHHH
Q psy1678 229 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPAD---DSYKLRGDALEAAIE 285 (297)
Q Consensus 229 ~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d---~~~~md~~~L~~~i~ 285 (297)
+.-.|+++..+|.++..++...|.+++.+|++ .++.+|+++|+++|+
T Consensus 108 ----------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~ 157 (391)
T 3dzz_A 108 ----------PGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLA 157 (391)
T ss_dssp ----------TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHT
T ss_pred ----------CCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHh
Confidence 11257789999999999999999999999996 234599999999986
No 59
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=98.00 E-value=3.6e-06 Score=77.17 Aligned_cols=89 Identities=20% Similarity=0.144 Sum_probs=69.9
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
.+|...++| +.+++++|.+ ..++|+|||+|+..++.+++- .+.-.|+
T Consensus 33 ~~~~~~~l~----~~la~~~~~~-----------~~~~~~sGt~al~~al~~~~~------------------~~gd~Vi 79 (367)
T 3nyt_A 33 LGPEVTELE----DRLADFVGAK-----------YCISCANGTDALQIVQMALGV------------------GPGDEVI 79 (367)
T ss_dssp SCHHHHHHH----HHHHHHHTCS-----------EEEEESCHHHHHHHHHHHTTC------------------CTTCEEE
T ss_pred CChHHHHHH----HHHHHHhCCC-----------cEEEeCCHHHHHHHHHHHhCC------------------CCcCEEE
Confidence 445555555 4666777775 289999999999999987631 1122577
Q ss_pred ecCCCcchHHHHHHhcCCceEEeeCCCC-CCcCHHHHHHHHHH
Q psy1678 245 CSDQAHSSVERAGLLGGVTIRGLPADDS-YKLRGDALEAAIEE 286 (297)
Q Consensus 245 ~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~-~~md~~~L~~~i~~ 286 (297)
++..+|.+...++...|.+++.+++|++ +.+|+++|+++|++
T Consensus 80 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~ 122 (367)
T 3nyt_A 80 TPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITP 122 (367)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCT
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCc
Confidence 8899999999999999999999999965 99999999988743
No 60
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.99 E-value=2.3e-05 Score=73.27 Aligned_cols=114 Identities=14% Similarity=0.019 Sum_probs=83.5
Q ss_pred HHHHHHHHHhcccc---ccccccCchhhHHHHHHHHHHHHHcCCC---ccccccCCCCCCeEEcCChhHHHHHHHHHHHH
Q psy1678 146 AIVADILSDSIACI---GFTWIASPACTELEVVMLDWLGKMLDLP---KEFLACSGGKGGGVIQGTASEATLVALLGAKA 219 (297)
Q Consensus 146 svl~d~l~~~lN~n---~~~~~~~p~~~~iE~~v~~~l~~llg~~---~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~ 219 (297)
..+.+.+...+..+ ...|...+...++++.+.+|+.+.+|++ ++ ..++|+|||+++..++.+..+
T Consensus 61 ~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~---------~v~~t~G~~~al~~~~~~l~~ 131 (425)
T 1vp4_A 61 KELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDED---------NLIFTVGSQQALDLIGKLFLD 131 (425)
T ss_dssp HHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGG---------GEEEEEHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcc---------cEEEeccHHHHHHHHHHHhCC
Confidence 33455555554432 1234334456789999999998887854 32 589999999999888876411
Q ss_pred HHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHH
Q psy1678 220 KTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDL 288 (297)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~ 288 (297)
+.-.|++...+|+++..++...|.+++.||+++++ +|+++|+++|++..
T Consensus 132 -------------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~ 180 (425)
T 1vp4_A 132 -------------------DESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFD 180 (425)
T ss_dssp -------------------TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHH
T ss_pred -------------------CCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhh
Confidence 11246677889999999999999999999998875 99999999998743
No 61
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=97.99 E-value=5.8e-05 Score=70.08 Aligned_cols=114 Identities=5% Similarity=-0.105 Sum_probs=81.8
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHh
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 227 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~ 227 (297)
+.+.+....+.....|.......++.+.+.+|+....|.... ...++|+|||+++..++.+..+
T Consensus 61 v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~--------~~i~~t~g~~~al~~~~~~l~~-------- 124 (418)
T 3rq1_A 61 VKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGH--------IRSIATAGGTGGIHHLIHNYTE-------- 124 (418)
T ss_dssp HHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE--------EEEEEESHHHHHHHHHHHHHSC--------
T ss_pred HHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCcccc--------ccEEECCchHHHHHHHHHHhcC--------
Confidence 344444444322233444445677888888888777664311 1489999999999988875311
Q ss_pred hCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCC-CCCCcCHHHHHHHHHHHH
Q psy1678 228 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPAD-DSYKLRGDALEAAIEEDL 288 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d-~~~~md~~~L~~~i~~~~ 288 (297)
+.-.|+++.-+|.+...++...|.+++.||++ +++.+|+++|+++|++..
T Consensus 125 -----------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~ 175 (418)
T 3rq1_A 125 -----------PGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELA 175 (418)
T ss_dssp -----------TTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHH
T ss_pred -----------CCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhh
Confidence 11246778899999999999999999999995 567999999999998743
No 62
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=97.99 E-value=4.6e-05 Score=71.31 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=77.7
Q ss_pred CchhhHHHHHHHHHHHHHcCC----CccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCce
Q psy1678 166 SPACTELEVVMLDWLGKMLDL----PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 241 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~----~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~ 241 (297)
.+...++++.+.+|+.+..|+ +.+ ..+||+|||++|..++.+.++ +.-
T Consensus 85 ~~g~~~l~~~la~~~~~~~~~~~~~~~~---------~v~~~~gg~~a~~~~~~~l~~-------------------~gd 136 (435)
T 3piu_A 85 YHGLPAFKKAMVDFMAEIRGNKVTFDPN---------HLVLTAGATSANETFIFCLAD-------------------PGE 136 (435)
T ss_dssp TTCCHHHHHHHHHHHHHHTTTSSCCCGG---------GEEEEEHHHHHHHHHHHHHCC-------------------TTC
T ss_pred CCCcHHHHHHHHHHHHHhhCCCCCCCHH---------HEEEcCChHHHHHHHHHHhcC-------------------CCC
Confidence 344578999999999887763 232 589999999999998877521 112
Q ss_pred EEEecCCCcchHHHHHH-hcCCceEEeeCCC--CCCcCHHHHHHHHHHHHHCCC
Q psy1678 242 VGYCSDQAHSSVERAGL-LGGVTIRGLPADD--SYKLRGDALEAAIEEDLKKGK 292 (297)
Q Consensus 242 ~i~~s~~aH~Si~Kaa~-~lg~~v~~Vp~d~--~~~md~~~L~~~i~~~~~~G~ 292 (297)
.|++.+..|.++..++. ..|.+++.+|.++ .+.+|+++|+++|++...++.
T Consensus 137 ~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 190 (435)
T 3piu_A 137 AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNL 190 (435)
T ss_dssp EEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTC
T ss_pred eEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCC
Confidence 56778889999999888 7899999999986 467999999999988766654
No 63
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=97.98 E-value=2.4e-05 Score=70.81 Aligned_cols=85 Identities=12% Similarity=0.118 Sum_probs=70.6
Q ss_pred HHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchH
Q psy1678 174 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSV 253 (297)
Q Consensus 174 ~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si 253 (297)
.++.+++++++|.+.+ .-++|+|||+++..++.+..+ +.-.|+++..+|.++
T Consensus 54 ~~l~~~la~~~~~~~~---------~i~~~~g~~~a~~~~~~~l~~-------------------~gd~vl~~~~~~~~~ 105 (354)
T 3ly1_A 54 LMLGNKLAAHHQVEAP---------SILLTAGSSEGIRAAIEAYAS-------------------LEAQLVIPELTYGDG 105 (354)
T ss_dssp HHHHHHHHHHTTSCGG---------GEEEESHHHHHHHHHHHHHCC-------------------TTCEEEEESSSCTHH
T ss_pred HHHHHHHHHHhCCChH---------HEEEeCChHHHHHHHHHHHhC-------------------CCCeEEECCCCchHH
Confidence 3567889999998654 589999999999988876411 112466788999999
Q ss_pred HHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 254 ERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 254 ~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
..++...|.+++.||.++++.+|+++|+++|++
T Consensus 106 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~ 138 (354)
T 3ly1_A 106 EHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAA 138 (354)
T ss_dssp HHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhcc
Confidence 999999999999999998899999999999973
No 64
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=97.97 E-value=1.3e-05 Score=72.51 Aligned_cols=90 Identities=16% Similarity=0.121 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
...++.+++++++|.+.+. ...+||+|||+++..++.+.+. ..+-+++++...|.
T Consensus 38 ~~~~l~~~la~~~g~~~~~-------~~v~~~~g~t~a~~~~~~~~~~------------------~gd~vi~~~~~~~~ 92 (366)
T 1m32_A 38 VVEQIRQQLTALATASEGY-------TSVLLQGSGSYAVEAVLGSALG------------------PQDKVLIVSNGAYG 92 (366)
T ss_dssp THHHHHHHHHHHHCSSSSE-------EEEEEESCHHHHHHHHHHHSCC------------------TTCCEEEEESSHHH
T ss_pred HHHHHHHHHHHHhCCCCcC-------cEEEEecChHHHHHHHHHHhcC------------------CCCeEEEEeCCCcc
Confidence 3445777888999843210 1489999999999999887631 01235667778887
Q ss_pred h-HHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 252 S-VERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 252 S-i~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+ +.+++...|++++.||++.++.+|+++|+++|++
T Consensus 93 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 128 (366)
T 1m32_A 93 ARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNA 128 (366)
T ss_dssp HHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhc
Confidence 6 5678888999999999999999999999999976
No 65
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=97.97 E-value=6.1e-05 Score=69.17 Aligned_cols=91 Identities=14% Similarity=0.077 Sum_probs=67.4
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
+..++...++|+ .+++++|.+. .+++++||+||..++.+.+ . .+.-.
T Consensus 34 ~~~~~~~~~l~~----~la~~~~~~~-----------~i~~~sGt~al~~~l~~l~---~---------------~~gd~ 80 (388)
T 1b9h_A 34 RMGGDEVNSFER----EFAAHHGAAH-----------ALAVTNGTHALELALQVMG---V---------------GPGTE 80 (388)
T ss_dssp TTTCSHHHHHHH----HHHHHTTCSE-----------EEEESCHHHHHHHHHHHTT---C---------------CTTCE
T ss_pred ecCCHHHHHHHH----HHHHHhCCCe-----------EEEeCCHHHHHHHHHHHcC---C---------------CCcCE
Confidence 334455555554 5667777753 4555556999999888752 1 01125
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
|+++..+|+++..++...|+.++.||+|+ ++.+|+++|+++|++
T Consensus 81 Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~ 125 (388)
T 1b9h_A 81 VIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP 125 (388)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT
T ss_pred EEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc
Confidence 77899999999999999999999999997 489999999998853
No 66
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=97.96 E-value=1.5e-05 Score=75.53 Aligned_cols=115 Identities=10% Similarity=0.065 Sum_probs=79.4
Q ss_pred HHHHHHHhccccccccccC-chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACIGFTWIAS-PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 226 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~-p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~ 226 (297)
+.+.+....+.+...|..+ +....+..++.+|+++++|.+++ .-+||+|+|+++..++.+..+.
T Consensus 87 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~t~g~t~al~~~~~~~~~~------ 151 (465)
T 3e9k_A 87 LEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK---------EIALMNALTVNLHLLMLSFFKP------ 151 (465)
T ss_dssp HHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG---------GEEECSCHHHHHHHHHHHHCCC------
T ss_pred HHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC---------CEEEECCHHHHHHHHHHHhccc------
Confidence 4455544334433333332 23344556688999999999864 5889999999988877764210
Q ss_pred hhCCCCCCcCCCCceEEEecCCCcch----HHHHHHhcCCc-----eEEeeCCCCCCcCHHHHHHHHHHH
Q psy1678 227 EAHPDWKDSDIIANLVGYCSDQAHSS----VERAGLLGGVT-----IRGLPADDSYKLRGDALEAAIEED 287 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~s~~aH~S----i~Kaa~~lg~~-----v~~Vp~d~~~~md~~~L~~~i~~~ 287 (297)
+ ..+-.|+++..+|+| +...++..|+. +..+|.+.++.+|+++|+++|++.
T Consensus 152 --~--------~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~ 211 (465)
T 3e9k_A 152 --T--------PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKE 211 (465)
T ss_dssp --C--------SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHH
T ss_pred --c--------CCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhc
Confidence 1 123468889999988 55577788986 345678889999999999999754
No 67
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=97.96 E-value=8.6e-05 Score=68.46 Aligned_cols=150 Identities=7% Similarity=-0.085 Sum_probs=90.7
Q ss_pred HHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhcc-ccccccccCchhhHHHHHHHHHHHHHcCCCcccc
Q psy1678 113 EVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIA-CIGFTWIASPACTELEVVMLDWLGKMLDLPKEFL 191 (297)
Q Consensus 113 ~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN-~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~ 191 (297)
.+.+.+...-.+.....+.+.|+.+...++..+.+ .+.+..... .....|........+-+.+.+|+....|.+-+
T Consensus 17 ~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v-~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-- 93 (401)
T 7aat_A 17 GVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCV-RKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFK-- 93 (401)
T ss_dssp HHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHH-HHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH--
T ss_pred HHHHHHhhCCCCCceeeeeeeEECCCCCEechHHH-HHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccc--
Confidence 34444443322333444445454444334333333 333333332 12223433344556666677777766664311
Q ss_pred ccCCCCCCeEE--cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeC
Q psy1678 192 ACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA 269 (297)
Q Consensus 192 ~~~~~~~~G~~--tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~ 269 (297)
...-++ |+|||+++..++.+.+... . +.-.|+++.-+|.+...+++..|.+++.+|+
T Consensus 94 -----~~~i~~v~t~G~~~al~~~~~~l~~~~-~---------------~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~ 152 (401)
T 7aat_A 94 -----SGRYVTVQGISGTGSLRVGANFLQRFF-K---------------FSRDVYLPKPSWGNHTPIFRDAGLQLQAYRY 152 (401)
T ss_dssp -----TTCEEEEEEEHHHHHHHHHHHHHHHHC-T---------------TCCEEEEEESCCTTHHHHHHHTTCEEEEEEC
T ss_pred -----cCceEEEecCcchHHHHHHHHHHHHhc-c---------------CCCEEEEcCCCchhHHHHHHHcCCeeEeeee
Confidence 014555 9999999999987764321 0 1125667888999999999999999999998
Q ss_pred C--CCCCcCHHHHHHHHHH
Q psy1678 270 D--DSYKLRGDALEAAIEE 286 (297)
Q Consensus 270 d--~~~~md~~~L~~~i~~ 286 (297)
+ +++.+|++.|++.+++
T Consensus 153 ~~~~~~~~d~~~l~~~l~~ 171 (401)
T 7aat_A 153 YDPKTCSLDFTGAMEDISK 171 (401)
T ss_dssp EETTTTEECHHHHHHHHTT
T ss_pred eccccCccCHHHHHHHHHh
Confidence 6 4799999999888875
No 68
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=97.96 E-value=4.6e-05 Score=69.66 Aligned_cols=92 Identities=9% Similarity=-0.023 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
..++++.+.+|+.+.+|++-.. ..-++|+|||+++..++.+..+ +.-.|++++.
T Consensus 71 ~~~l~~~la~~l~~~~g~~~~~-------~~v~~~~G~~~al~~~~~~l~~-------------------~gd~Vl~~~~ 124 (369)
T 3cq5_A 71 AVELRDELAAYITKQTGVAVTR-------DNLWAANGSNEILQQLLQAFGG-------------------PGRTALGFQP 124 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCG-------GGEEEESHHHHHHHHHHHHHCS-------------------TTCEEEEEES
T ss_pred HHHHHHHHHHhhhhcccCCCCh-------HhEEECCChHHHHHHHHHHhcC-------------------CCCEEEEcCC
Confidence 3688999999999987765210 2588999999999888766411 1124677789
Q ss_pred CcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 249 AHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 249 aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+|.++..++...|.+++.||.|+++.+|+++|+++|++
T Consensus 125 ~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 162 (369)
T 3cq5_A 125 SYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRA 162 (369)
T ss_dssp SCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhc
Confidence 99999999999999999999998889999999999975
No 69
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=97.96 E-value=3.4e-05 Score=70.42 Aligned_cols=90 Identities=10% Similarity=0.030 Sum_probs=72.2
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
..+++..+.+|+++.+|.+-.. ..-+||+|||+++..++.+..+ +.-.|+++..
T Consensus 61 ~~~~~~~l~~~l~~~~g~~~~~-------~~v~~~~g~~~a~~~~~~~l~~-------------------~gd~vl~~~~ 114 (383)
T 3kax_A 61 PENIGDIICNWTKKQYNWDIQK-------EWIVFSAGIVPALSTSIQAFTK-------------------ENESVLVQPP 114 (383)
T ss_dssp CTTHHHHHHHHHHHHHCCCCCG-------GGEEEESCHHHHHHHHHHHHCC-------------------TTCEEEECSS
T ss_pred CHHHHHHHHHHHHHHhCCCCCh-------hhEEEcCCHHHHHHHHHHHhCC-------------------CCCEEEEcCC
Confidence 5678888999999999943210 2589999999999988877511 1125778889
Q ss_pred CcchHHHHHHhcCCceEEeeCCC---CCCcCHHHHHHHH
Q psy1678 249 AHSSVERAGLLGGVTIRGLPADD---SYKLRGDALEAAI 284 (297)
Q Consensus 249 aH~Si~Kaa~~lg~~v~~Vp~d~---~~~md~~~L~~~i 284 (297)
+|.+...++...|.+++.||.+. ++.+|+++|+++|
T Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l 153 (383)
T 3kax_A 115 IYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF 153 (383)
T ss_dssp CCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHh
Confidence 99999999999999999999974 3459999999998
No 70
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=97.95 E-value=8.8e-05 Score=69.41 Aligned_cols=82 Identities=11% Similarity=0.028 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+++++++|.+. .+++++||++|+.++.+. .. +.-.|+++...
T Consensus 108 ~~~~~~l~~~la~~~g~~~-----------~i~~~sGs~a~~~al~~l----~~---------------~gd~vl~~~~~ 157 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTTG-----------AIVFSTGYMANLGIISTL----AG---------------KGEYVILDADS 157 (427)
T ss_dssp CHHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHH----SC---------------TTCEEEEETTC
T ss_pred cHHHHHHHHHHHHHhCCCc-----------eEEecCcHHHHHHHHHHh----cC---------------CCCEEEECCcc
Confidence 4566667788889888763 678888899999877763 11 12257788999
Q ss_pred cchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
|.++..++...|.+++.+|. +|+++|++.|++
T Consensus 158 h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~ 189 (427)
T 2w8t_A 158 HASIYDGCQQGNAEIVRFRH-----NSVEDLDKRLGR 189 (427)
T ss_dssp CHHHHHHHHHSCSEEEEECT-----TCHHHHHHHHHT
T ss_pred cHHHHHHHHHcCCeeEEeCC-----CCHHHHHHHHHh
Confidence 99999999999999888873 799999999975
No 71
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=97.94 E-value=1.9e-05 Score=73.19 Aligned_cols=98 Identities=8% Similarity=-0.034 Sum_probs=77.3
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|...+...++++.+.+|+.+..|++-+. ...++|+|||+++..++.+..+ +.-.
T Consensus 74 y~~~~g~~~l~~~la~~l~~~~g~~~~~-------~~v~~t~g~~~al~~~~~~l~~-------------------~gd~ 127 (406)
T 1xi9_A 74 YGDSEGLPELRKAIVEREKRKNGVDITP-------DDVRVTAAVTEALQLIFGALLD-------------------PGDE 127 (406)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCG-------GGEEEESHHHHHHHHHHHHHCC-------------------TTCE
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCH-------HHEEEcCChHHHHHHHHHHhCC-------------------CCCE
Confidence 4444456789999999999988865321 2589999999999998887511 1125
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~~ 286 (297)
|+++..+|.++..++...|.+++.||+++ .+.+|+++|+++|++
T Consensus 128 Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 173 (406)
T 1xi9_A 128 ILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD 173 (406)
T ss_dssp EEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT
T ss_pred EEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc
Confidence 67788999999999999999999999984 567999999998864
No 72
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=97.93 E-value=0.00015 Score=67.43 Aligned_cols=151 Identities=9% Similarity=-0.039 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhccc-cccccccCchhhHHHHHHHHHHHHHcCCCcc
Q psy1678 111 WQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSIAC-IGFTWIASPACTELEVVMLDWLGKMLDLPKE 189 (297)
Q Consensus 111 ~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~lN~-n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~ 189 (297)
.-.+...+.+.-.++......+-|...-..++.++.+ .+.+...+.. ....|........+.+.+.+|+....+.+-.
T Consensus 36 i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v-~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 114 (420)
T 4f4e_A 36 ILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAV-RDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIA 114 (420)
T ss_dssp HHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHH-HHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHH-HHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccc
Confidence 3444444444323334444444333222222222343 3444444443 2223444445566777777777655442101
Q ss_pred ccccCCCCC--CeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEe
Q psy1678 190 FLACSGGKG--GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGL 267 (297)
Q Consensus 190 ~~~~~~~~~--~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~V 267 (297)
.. ..++|+|||+++..++....-. . +.-.|++++-+|.+...++...|.+++.|
T Consensus 115 -------~~~~~i~~t~G~t~al~~~~~~~~~~--~---------------~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v 170 (420)
T 4f4e_A 115 -------AGRVVTAQALGGTGALKIGADFLRTL--N---------------PKAKVAISDPSWENHRALFDMAGFEVVAY 170 (420)
T ss_dssp -------TTCEEEEEEEHHHHHHHHHHHHHHHH--C---------------TTCCEEEEESCCHHHHHHHHHTTCCEEEE
T ss_pred -------cCceEEEECCccHHHHHHHHHHHHHh--C---------------CCCEEEEeCCCcHhHHHHHHHcCCeEEEe
Confidence 01 3799999999999986543211 0 11146678899999999999999999999
Q ss_pred eC--CCCCCcCHHHHHHHHHH
Q psy1678 268 PA--DDSYKLRGDALEAAIEE 286 (297)
Q Consensus 268 p~--d~~~~md~~~L~~~i~~ 286 (297)
|+ ++++.+|++.|++.|++
T Consensus 171 ~~~~~~~~~~d~~~l~~~l~~ 191 (420)
T 4f4e_A 171 PYYDAKTNGVNFDGMLAALNG 191 (420)
T ss_dssp ECEETTTTEECHHHHHHHHTT
T ss_pred eeeccccCccCHHHHHHHHHh
Confidence 99 45799999999999864
No 73
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=97.92 E-value=4.2e-05 Score=70.44 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=77.0
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|...+....+.+.+.+|+.+.+|++-+. ..-+||+|||+++..++.+..+ ..+-.
T Consensus 72 y~~~~g~~~lr~~la~~l~~~~g~~~~~-------~~i~~~~g~~~al~~~~~~l~~------------------~g~d~ 126 (398)
T 3ele_A 72 YTSAQGDVETRAAIAEFLNNTHGTHFNA-------DNLYMTMGAAASLSICFRALTS------------------DAYDE 126 (398)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCG-------GGEEEESSHHHHHHHHHHHHCC------------------STTCE
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCCh-------HHEEEccCHHHHHHHHHHHHcC------------------CCCCE
Confidence 4334455788899999999999864221 2589999999999998887511 11125
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
|++...+|.++..++...|.+++.||+++ ++.+|+++|+++|++
T Consensus 127 vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~ 171 (398)
T 3ele_A 127 FITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINA 171 (398)
T ss_dssp EEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCT
T ss_pred EEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCc
Confidence 66788899999999999999999999985 579999999988753
No 74
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=97.92 E-value=1.5e-05 Score=72.66 Aligned_cols=85 Identities=15% Similarity=0.030 Sum_probs=68.9
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+.+++++|.+ ..++|+|||+++..++.+.+.+ . .+.-.|+++..+|++..
T Consensus 36 ~l~~~la~~~~~~-----------~v~~~~ggt~al~~~~~~~~~~-~---------------~~gd~Vl~~~~~~~~~~ 88 (375)
T 2fnu_A 36 LFEEALCEFLGVK-----------HALVFNSATSALLTLYRNFSEF-S---------------ADRNEIITTPISFVATA 88 (375)
T ss_dssp HHHHHHHHHHTCS-----------EEEEESCHHHHHHHHHHHSSCC-C---------------TTSCEEEECSSSCTHHH
T ss_pred HHHHHHHHHhCCC-----------eEEEeCCHHHHHHHHHHHhccc-C---------------CCCCEEEECCCccHhHH
Confidence 4556778888876 2899999999999999886321 0 01225778999999999
Q ss_pred HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.++...|++++.||+++++.+|+++|+++|++
T Consensus 89 ~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~ 120 (375)
T 2fnu_A 89 NMLLESGYTPVFAGIKNDGNIDELALEKLINE 120 (375)
T ss_dssp HHHHHTTCEEEECCBCTTSSBCGGGSGGGCCT
T ss_pred HHHHHCCCEEEEeccCCCCCCCHHHHHhhcCc
Confidence 99999999999999998889999999988853
No 75
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=97.90 E-value=5.2e-05 Score=70.73 Aligned_cols=91 Identities=14% Similarity=0.072 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.+++..+.+|+++.+|++... ..-+||+|||+||..++.+++. +.-.|++...+
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~-------~~v~~~~g~~ea~~~a~~~~~~-------------------~gd~Vi~~~~~ 152 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVK-------EDILFIDGVVPAISIALQAFSE-------------------KGDAVLINSPV 152 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCG-------GGEEEESCHHHHHHHHHHHHSC-------------------TEEEEEEEESC
T ss_pred HHHHHHHHHHHHHHhCCCCCH-------HHEEEcCCHHHHHHHHHHHhcC-------------------CCCEEEECCCC
Confidence 678889999999999965221 2589999999999999987521 12356778899
Q ss_pred cchHHHHHHhcCCceEEeeCC-C--CCCcCHHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGVTIRGLPAD-D--SYKLRGDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa~~lg~~v~~Vp~d-~--~~~md~~~L~~~i~~ 286 (297)
|+++..++...|.+++.+|.+ . ++.+|+++|+++|++
T Consensus 153 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~ 192 (421)
T 3l8a_A 153 YYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID 192 (421)
T ss_dssp CHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH
T ss_pred cHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc
Confidence 999999999999999999986 3 347999999999974
No 76
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=97.88 E-value=6.2e-05 Score=70.15 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=82.0
Q ss_pred HHHHHHHhccc---cccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCC-CeEEcCChhHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIAC---IGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQ 223 (297)
Q Consensus 148 l~d~l~~~lN~---n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~-~G~~tsGGT~anl~Al~~AR~~~~~ 223 (297)
+.+.+...++. ....|...+....+++.+.+|+.+.+|.+.+ .. ..+||+|||+++..++.+...
T Consensus 55 v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~~---- 123 (429)
T 1yiz_A 55 ALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTIN-------PMTEVLVTVGAYEALYATIQGHVD---- 123 (429)
T ss_dssp HHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCC-------TTTSEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------CcCCEEEecChHHHHHHHHHHhcC----
Confidence 34555555543 1223333344678988999999998886521 12 589999999999998887521
Q ss_pred HHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCC----------CCCcCHHHHHHHHH
Q psy1678 224 RVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADD----------SYKLRGDALEAAIE 285 (297)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~----------~~~md~~~L~~~i~ 285 (297)
+.-.|+++..+|.++..++...|.+++.||++. ++.+|+++|+++|+
T Consensus 124 ---------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 180 (429)
T 1yiz_A 124 ---------------EGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN 180 (429)
T ss_dssp ---------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC
T ss_pred ---------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc
Confidence 112466778899999999999999999999986 46899999999885
No 77
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=97.87 E-value=6.1e-05 Score=69.36 Aligned_cols=91 Identities=10% Similarity=-0.089 Sum_probs=72.1
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
..++++.+.+|+.+.+|++... ..-++|+|||+++..++.+..+ +.-.|++...
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~-------~~v~~t~g~~~a~~~~~~~l~~-------------------~gd~vl~~~p 121 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQT-------DWIINTAGVVPAVFNAVREFTK-------------------PGDGVIIITP 121 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCG-------GGEEEESSHHHHHHHHHHHHCC-------------------TTCEEEECSS
T ss_pred cHHHHHHHHHHHHHHhCCCCCh-------hhEEEcCCHHHHHHHHHHHhcC-------------------CCCEEEEcCC
Confidence 6788889999999988854211 2589999999999988876421 1125677889
Q ss_pred CcchHHHHHHhcCCceEEeeCC-CC--CCcCHHHHHHHHH
Q psy1678 249 AHSSVERAGLLGGVTIRGLPAD-DS--YKLRGDALEAAIE 285 (297)
Q Consensus 249 aH~Si~Kaa~~lg~~v~~Vp~d-~~--~~md~~~L~~~i~ 285 (297)
+|.++..++...|.+++.||++ ++ +.+|+++|+++|+
T Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~ 161 (399)
T 1c7n_A 122 VYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSK 161 (399)
T ss_dssp CCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHT
T ss_pred CcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhc
Confidence 9999999999999999999986 43 3699999999986
No 78
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=97.87 E-value=7.4e-06 Score=75.04 Aligned_cols=91 Identities=15% Similarity=0.095 Sum_probs=70.1
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
+..++...++|+ .+++++|.+ ..+||+|||+||..++.+.+ . .+.-.
T Consensus 32 ~~~~~~~~~l~~----~la~~~~~~-----------~~i~~~sgt~al~~~l~~l~---~---------------~~gd~ 78 (373)
T 3frk_A 32 FILGDEDKKFEQ----EFADYCNVN-----------YCIGCGNGLDALHLILKGYD---I---------------GFGDE 78 (373)
T ss_dssp CSSSHHHHHHHH----HHHHHHTSS-----------EEEEESCHHHHHHHHHHHTT---C---------------CTTCE
T ss_pred ccCCchHHHHHH----HHHHHhCCC-----------eEEEeCCHHHHHHHHHHHcC---C---------------CCcCE
Confidence 334455555555 566667765 28999999999999888752 0 11225
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeCC-CCCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPAD-DSYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d-~~~~md~~~L~~~i~~ 286 (297)
|+++..+|+++..++...|.+++.+++| +++.+|+++|+++|++
T Consensus 79 Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~ 123 (373)
T 3frk_A 79 VIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE 123 (373)
T ss_dssp EEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCT
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCC
Confidence 7789999999999999999999999998 6799999999988754
No 79
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=97.86 E-value=0.00054 Score=64.58 Aligned_cols=151 Identities=5% Similarity=-0.126 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHHhc--c-ccccccccCchhhHHHHHHHHHHHHHcCCC
Q psy1678 111 WQEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSDSI--A-CIGFTWIASPACTELEVVMLDWLGKMLDLP 187 (297)
Q Consensus 111 ~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~~l--N-~n~~~~~~~p~~~~iE~~v~~~l~~llg~~ 187 (297)
.-.+.+.++..-.+.......+.|+.+-..+....++ .+.+.... + .....|...+....+.+.+.+|+ +|.+
T Consensus 36 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av-~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~~ 111 (448)
T 3meb_A 36 ILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAV-KEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGKD 111 (448)
T ss_dssp THHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHH-HHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCTT
T ss_pred HHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHH-HHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCCC
Confidence 4455555554433333444444454443333333333 33333333 1 11223333334445555555555 2654
Q ss_pred ccccccCCCCCCeEE--cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHH----hcC
Q psy1678 188 KEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGL----LGG 261 (297)
Q Consensus 188 ~~~~~~~~~~~~G~~--tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~----~lg 261 (297)
.... ....-++ |+|||+|+..++...+.. . +.-.|+++.-+|.+....+. ..|
T Consensus 112 ~~~~----~~~~i~~~~t~ggt~al~l~~~~~~~~--~---------------~gd~Vlv~~p~~~~~~~~~~~~~~~~G 170 (448)
T 3meb_A 112 SKAA----QEGRIASCQSLSGTGSLHIGFEFLHLW--M---------------PKAEFYMPSTTWPNHYGIYDKVFNKLK 170 (448)
T ss_dssp CHHH----HTTCEEEEEESHHHHHHHHHHHHHHHH--C---------------TTCCEEEESSCCTHHHHHHHHHHCTTT
T ss_pred cccc----CcCcEEEEECCcHHHHHHHHHHHHHHh--C---------------CCCEEEECCCCCHhHHHHHHhhHHhCC
Confidence 1000 0025778 999999998765433221 0 11246778899999999999 999
Q ss_pred CceEEeeC-CCC--CCcCHHHHHHHHHH
Q psy1678 262 VTIRGLPA-DDS--YKLRGDALEAAIEE 286 (297)
Q Consensus 262 ~~v~~Vp~-d~~--~~md~~~L~~~i~~ 286 (297)
.+++.+|+ |++ +.+|+++|+++|++
T Consensus 171 ~~v~~~~~~~~~~~~~~d~e~l~~~l~~ 198 (448)
T 3meb_A 171 VPYKEYTYLRKDGELEIDFSNTKKDIQS 198 (448)
T ss_dssp SCCEEECCBCTTSCSSBCHHHHHHHHHH
T ss_pred CeEEEEeccccccCCCcCHHHHHHHHHh
Confidence 99999999 764 89999999999975
No 80
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=97.86 E-value=3.7e-05 Score=73.62 Aligned_cols=122 Identities=10% Similarity=0.084 Sum_probs=83.1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc-----cCCC-CCCChHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy1678 15 IMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ-----MGSN-IMGDVNEFKDFAKAMVDYVGNYLENIRDRRVL 88 (297)
Q Consensus 15 ~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~-----l~~~-~p~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~ 88 (297)
..|+.++||+.+++|+|+|++|+++++ ++.+.+.|+ ++.. .|.+++.++++++++.+.+.+ ...
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~ 96 (497)
T 2qma_A 27 GELGSAEFASVMSHTTSAMKSVFEQVN--APYSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAK--------NAI 96 (497)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHHHHCC--SSSCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTT--------TSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhcc--CCCCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhc--------CCC
Confidence 468999999999999999999999993 448888886 5654 477888888888887776553 345
Q ss_pred CCCChhhhhccCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCccccccCCCC--CCHHHHHHHHHHHhcccc
Q psy1678 89 PTVEPGYLRPLIPETAPDTPDTWQEVMSDIERVIMPGVTHWHSPKFHAYFPTA--NSYPAIVADILSDSIACI 159 (297)
Q Consensus 89 ~~~~p~~l~~~~~~~lP~~g~~~~~il~~l~~~~~~~~~~~~~p~~~g~~~s~--~~~~svl~d~l~~~lN~n 159 (297)
++.+|.++ ..+.. +.....+++.+....... ....|-.++ ......+.+|++.+++.+
T Consensus 97 ~~~~~~yl-~~~~~-----~~~~~~v~~~~~~~~~n~-------~~~~~~~~~~~~~le~~~~~~la~~~g~~ 156 (497)
T 2qma_A 97 FTQHPDCI-AHLHT-----PPLMPAVAAEAMIAALNQ-------SMDSWDQASSATYVEQKVVNWLCDKYDLS 156 (497)
T ss_dssp CTTSTTBC-SSSCC-----CCBHHHHHHHHHHHHHCC-------CTTCGGGCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCee-EeCCC-----CCcHHHHHHHHHHHhhcc-------cccchhhChHHHHHHHHHHHHHHHHhCCC
Confidence 66677766 33222 356777888776554311 112222222 234566788899999763
No 81
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=97.86 E-value=3.5e-05 Score=70.02 Aligned_cols=84 Identities=12% Similarity=0.105 Sum_probs=68.5
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.+.+ ..+||+|||+++..++.+... +.-.|+++..+|+++.
T Consensus 71 ~lr~~la~~~~~~~~---------~v~~~~g~t~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~ 122 (363)
T 3ffh_A 71 SLRKEVADFYQLEEE---------ELIFTAGVDELIELLTRVLLD-------------------TTTNTVMATPTFVQYR 122 (363)
T ss_dssp HHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHCS-------------------TTCEEEEEESSCHHHH
T ss_pred HHHHHHHHHhCCChh---------hEEEeCCHHHHHHHHHHHHcc-------------------CCCEEEEcCCChHHHH
Confidence 455678888887654 589999999999998876411 1124667778999999
Q ss_pred HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.++...|.+++.||.++++.+|+++|+++|++
T Consensus 123 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 154 (363)
T 3ffh_A 123 QNALIEGAEVREIPLLQDGEHDLEGMLNAIDE 154 (363)
T ss_dssp HHHHHHTCEEEEEECCTTSCCCHHHHHHHCCT
T ss_pred HHHHHcCCEEEEecCCCCCCcCHHHHHHhccc
Confidence 99999999999999998999999999998853
No 82
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=97.86 E-value=0.00013 Score=67.59 Aligned_cols=150 Identities=7% Similarity=-0.068 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCccccccCCCCCCHHHHHHHHHHH-hcccc-ccccccCchhhHHHHHHHHHHHHHcCCCcc
Q psy1678 112 QEVMSDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADILSD-SIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKE 189 (297)
Q Consensus 112 ~~il~~l~~~~~~~~~~~~~p~~~g~~~s~~~~~svl~d~l~~-~lN~n-~~~~~~~p~~~~iE~~v~~~l~~llg~~~~ 189 (297)
-.+.+.+.+.-.+.....+++.++++-.....++. +.+.+.. .+... ...|...+....+.+.+.+|+....|.+-+
T Consensus 17 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~-v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~ 95 (412)
T 1yaa_A 17 FGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPS-VKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQ 95 (412)
T ss_dssp HHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHH-HHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHH-HHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCC
Confidence 34444443321123344555544333222122233 4455555 54422 223433445667777777777665553211
Q ss_pred ccccCCCCCCeEE--cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEe
Q psy1678 190 FLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGL 267 (297)
Q Consensus 190 ~~~~~~~~~~G~~--tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~V 267 (297)
...-++ |+|||+|+..++...+.. . +.-.|+++.-+|.+...++...|.+++.|
T Consensus 96 -------~~~i~~~~t~g~~~a~~~~~~~~~~~--~---------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v 151 (412)
T 1yaa_A 96 -------EDRVISVQSLSGTGALHISAKFFSKF--F---------------PDKLVYLSKPTWANHMAIFENQGLKTATY 151 (412)
T ss_dssp -------TTCEEEEEEEHHHHHHHHHHHHHHHH--C---------------TTCCEEEEESCCTTHHHHHHTTTCCEEEE
T ss_pred -------cceEEEEeccchHhHHHHHHHHHHHh--C---------------CCCEEEEeCCCCccHHHHHHHcCceEEEE
Confidence 025788 999999999886554321 0 11135667789999999999999999999
Q ss_pred eC-CC-CCCcCHHHHHHHHHH
Q psy1678 268 PA-DD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 268 p~-d~-~~~md~~~L~~~i~~ 286 (297)
|. ++ ++.+|+++|+++|++
T Consensus 152 ~~~~~~~~~~d~~~l~~~l~~ 172 (412)
T 1yaa_A 152 PYWANETKSLDLNGFLNAIQK 172 (412)
T ss_dssp ECEETTTTEECHHHHHHHHHH
T ss_pred eeecCCCCccCHHHHHHHHHh
Confidence 98 53 789999999999975
No 83
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=97.84 E-value=4.5e-05 Score=70.54 Aligned_cols=87 Identities=16% Similarity=0.065 Sum_probs=68.7
Q ss_pred chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 167 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
|...++|+ .+++++|.+ ..++|+|||+++..++.+.+ . .+.-.|+++
T Consensus 32 ~~~~~l~~----~la~~~~~~-----------~v~~~~ggt~al~~~~~~l~---~---------------~~gd~Vl~~ 78 (394)
T 1o69_A 32 EFVNRFEQ----SVKDYSKSE-----------NALALNSATAALHLALRVAG---V---------------KQDDIVLAS 78 (394)
T ss_dssp HHHHHHHH----HHHHHHCCS-----------EEEEESCHHHHHHHHHHHTT---C---------------CTTCEEEEE
T ss_pred hHHHHHHH----HHHHHhCCC-----------cEEEeCCHHHHHHHHHHHcC---C---------------CCCCEEEEC
Confidence 43445554 556666763 38999999999999988752 1 011257788
Q ss_pred CCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 247 DQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 247 ~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
..+|.+...++...|.+++.+|+++++.+|+++|+++|++
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 118 (394)
T 1o69_A 79 SFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKE 118 (394)
T ss_dssp SSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhc
Confidence 9999999999999999999999998999999999999975
No 84
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=97.84 E-value=0.00026 Score=64.89 Aligned_cols=97 Identities=12% Similarity=0.037 Sum_probs=70.9
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEE--cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCc
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 240 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~--tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~ 240 (297)
|...+...++.+.+.+|+... +.+++ .-+| |+|||+|+..++.+.+... + | +
T Consensus 65 y~~~~g~~~lr~~la~~~~~~-~~~~~---------~v~~~~~~g~~~a~~~~~~~~~~~~-~-----g----------d 118 (394)
T 2ay1_A 65 YAGLSGEPEFQKAMGELILGD-GLKSE---------TTATLATVGGTGALRQALELARMAN-P-----D----------L 118 (394)
T ss_dssp CCCSSCCHHHHHHHHHHHHGG-GCCGG---------GEEEEEEEHHHHHHHHHHHHHHHHC-T-----T----------C
T ss_pred CCCCCCcHHHHHHHHHHHhCC-CCCcc---------cEEEEecCCchhHHHHHHHHHHhcC-C-----C----------C
Confidence 433344567777777776432 22332 4677 9999999999998775421 0 1 1
Q ss_pred eEEEecCCCcchHHHHHHhcCCceEEeeCC--CCCCcCHHHHHHHHHH
Q psy1678 241 LVGYCSDQAHSSVERAGLLGGVTIRGLPAD--DSYKLRGDALEAAIEE 286 (297)
Q Consensus 241 ~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d--~~~~md~~~L~~~i~~ 286 (297)
.|+++.-+|.+...++...|.+++.+|.+ +++.+|+++|+++|++
T Consensus 119 -~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 165 (394)
T 2ay1_A 119 -RVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAA 165 (394)
T ss_dssp -CEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHT
T ss_pred -EEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHh
Confidence 35567789999999999999999999996 6789999999999874
No 85
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=97.83 E-value=7.7e-05 Score=67.94 Aligned_cols=89 Identities=7% Similarity=-0.125 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.++++.+.+|+.+..|.+-.. ..-+||+|||+++..++.+..+ +.-.|+++..+
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~-------~~i~~t~g~~~a~~~~~~~~~~-------------------~gd~vl~~~~~ 114 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARP-------EWIFPIPDVVRGLYIAIDHFTP-------------------AQSKVIVPTPA 114 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCG-------GGEEEESCHHHHHHHHHHHHSC-------------------TTCCEEEEESC
T ss_pred HHHHHHHHHHHHHHhCCCCCH-------HHEEEeCChHHHHHHHHHHhcC-------------------CCCEEEEcCCC
Confidence 678888899999888865321 2589999999999988876421 11135677889
Q ss_pred cchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
|.++..++...|.+++.+|++++ +|+++|+++|++
T Consensus 115 ~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~ 149 (377)
T 3fdb_A 115 YPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQA 149 (377)
T ss_dssp CTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHT
T ss_pred cHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhcc
Confidence 99999999999999999999987 999999999875
No 86
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=97.83 E-value=2e-05 Score=71.84 Aligned_cols=85 Identities=15% Similarity=0.197 Sum_probs=68.2
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.++. ...+||+|||+++..++.+..+ +.-.|+++..+|.++.
T Consensus 71 ~l~~~la~~~g~~~~--------~~i~~~~g~t~a~~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~ 123 (367)
T 3euc_A 71 ALRAKLKEVMQVPAG--------MEVLLGNGSDEIISMLALAAAR-------------------PGAKVMAPVPGFVMYA 123 (367)
T ss_dssp HHHHHHHHHHTCCTT--------CEEEEEEHHHHHHHHHHHHTCC-------------------TTCEEEEEESCSCCSC
T ss_pred HHHHHHHHHhCCCCc--------ceEEEcCCHHHHHHHHHHHHcC-------------------CCCEEEEcCCCHHHHH
Confidence 455677888888321 2589999999999988876411 1124667788999999
Q ss_pred HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.++...|.+++.||+++++.+|+++|+++|++
T Consensus 124 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 155 (367)
T 3euc_A 124 MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAE 155 (367)
T ss_dssp HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHH
T ss_pred HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhc
Confidence 99999999999999999999999999999976
No 87
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=97.83 E-value=0.00016 Score=66.92 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=69.7
Q ss_pred CchhhHHHHHHHHHH-HHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 166 SPACTELEVVMLDWL-GKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l-~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
+|...++|+. + ++++|..+ ..++|+|||+++..++.+.. +. +.-.|+
T Consensus 35 ~~~~~~l~~~----~~a~~~g~~~----------~~v~~~sgt~al~~al~~l~---~~---------------~Gd~Vi 82 (377)
T 3ju7_A 35 GPINQRFEQT----IMSGFFQNRG----------AVTTVANATLGLMAAIQLKK---RK---------------KGKYAL 82 (377)
T ss_dssp CHHHHHHHHH----HHHHTSTTCS----------EEEEESCHHHHHHHHHHHHS---CT---------------TCCEEE
T ss_pred CHHHHHHHHH----HHHHHhCCCC----------eEEEeCCHHHHHHHHHHHcC---CC---------------CcCEEE
Confidence 5666667764 5 77888322 38999999999998887641 10 112577
Q ss_pred ecCCCcchHHHHHHhcCCceEEeeCC-CCCCcCHHHHHHHHHH
Q psy1678 245 CSDQAHSSVERAGLLGGVTIRGLPAD-DSYKLRGDALEAAIEE 286 (297)
Q Consensus 245 ~s~~aH~Si~Kaa~~lg~~v~~Vp~d-~~~~md~~~L~~~i~~ 286 (297)
++..+|.+...++...|..++.|++| +++.+|+++|+++|..
T Consensus 83 ~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 125 (377)
T 3ju7_A 83 MPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEE 125 (377)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhc
Confidence 89999999999999999999999998 5799999999999843
No 88
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=97.83 E-value=0.00016 Score=73.13 Aligned_cols=83 Identities=13% Similarity=0.133 Sum_probs=66.2
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
+.-+.+++++|.+. .-++|+|+|++|..++.+... +.-.|+++..+|+|+.
T Consensus 209 ~~ee~la~l~G~d~----------~i~~~~Gtt~a~~~~i~al~~-------------------~GD~Vlv~~~~h~s~~ 259 (755)
T 2vyc_A 209 ESEKYAARVFGADR----------SWSVVVGTSGSNRTIMQACMT-------------------DNDVVVVDRNCHKSIE 259 (755)
T ss_dssp HHHHHHHHHHTCSE----------EEEESSHHHHHHHHHHHHHCC-------------------TTCEEEEESSCCHHHH
T ss_pred HHHHHHHHHhCCCc----------eEEECCcHHHHHHHHHHHhcC-------------------CCCEEEECCCchHHHH
Confidence 35578999999875 367788888999988887411 1125778999999999
Q ss_pred HHHHhcCCceEEeeCCCC-----CCc-----CHHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDS-----YKL-----RGDALEAAIEE 286 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~-----~~m-----d~~~L~~~i~~ 286 (297)
.++.+.|..++.++++.+ |.| |+++|+++|++
T Consensus 260 ~~~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~ 301 (755)
T 2vyc_A 260 QGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISE 301 (755)
T ss_dssp HHHHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHH
T ss_pred HHHHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHh
Confidence 999999999999998743 456 99999999986
No 89
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=97.82 E-value=3.8e-05 Score=70.34 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=74.5
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHh
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 227 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~ 227 (297)
+.+.+...+.. ...|...+...++++ .+++++|.+++ ..+||+|||+++..++.+..+
T Consensus 43 v~~a~~~~~~~-~~~y~~~~~~~~l~~----~la~~~~~~~~---------~v~~~~g~~~a~~~~~~~~~~-------- 100 (381)
T 1v2d_A 43 LLEAVRRALGR-QDQYAPPAGLPALRE----ALAEEFAVEPE---------SVVVTSGATEALYVLLQSLVG-------- 100 (381)
T ss_dssp HHHHHHHHTTT-SCSCCCTTCCHHHHH----HHHHHHTSCGG---------GEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHH-hcCCCCCCCCHHHHH----HHHHhcCCChh---------hEEEcCChHHHHHHHHHHhCC--------
Confidence 34444444443 223333333444554 55566787653 489999999999999887621
Q ss_pred hCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCC---CCCCcCHHHHHHHHH
Q psy1678 228 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPAD---DSYKLRGDALEAAIE 285 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d---~~~~md~~~L~~~i~ 285 (297)
+.-.|++++.+|.++..+++..|.+++.||++ +++.+|+++|+++|+
T Consensus 101 -----------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~ 150 (381)
T 1v2d_A 101 -----------PGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT 150 (381)
T ss_dssp -----------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC
T ss_pred -----------CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC
Confidence 11256778889999999999999999999998 578999999998874
No 90
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=97.82 E-value=2.7e-05 Score=71.12 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+.+++++|.+.+ ..++|+|||+++..++.+.+ .. +.-.|+++..+
T Consensus 58 ~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a~~~~~~~~~---~~---------------~gd~vl~~~~~ 110 (390)
T 1elu_A 58 QQLIAQLRQALAETFNVDPN---------TITITDNVTTGCDIVLWGLD---WH---------------QGDEILLTDCE 110 (390)
T ss_dssp HHHHHHHHHHHHHHTTSCGG---------GEEEESSHHHHHHHHHHHSC---CC---------------TTCEEEEETTC
T ss_pred HHHHHHHHHHHHHHcCCCHH---------HEEEeCChHHHHHHHHhCCC---CC---------------CCCEEEEecCc
Confidence 34556788899999998753 48999999999999888763 10 11256778899
Q ss_pred cchHHH----HHHhcCCceEEeeCC--CCCCcCHHHHHHHHHH
Q psy1678 250 HSSVER----AGLLGGVTIRGLPAD--DSYKLRGDALEAAIEE 286 (297)
Q Consensus 250 H~Si~K----aa~~lg~~v~~Vp~d--~~~~md~~~L~~~i~~ 286 (297)
|.+... .+...|.+++.||++ +++.+|+++|+++|++
T Consensus 111 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 153 (390)
T 1elu_A 111 HPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP 153 (390)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT
T ss_pred ccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC
Confidence 998654 467789999999998 6899999999988853
No 91
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=97.81 E-value=1.8e-05 Score=72.13 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=76.0
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHh
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 227 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~ 227 (297)
+.+.+...+... .+...+...++| +.+++++|.+ ..++|+|||+++..++.+.+ .
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~l~----~~la~~~~~~-----------~~~~~~~gt~a~~~~~~~~~---~----- 75 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEKFE----KRFAALHNAP-----------HAIGVGTGTDALAMSFKMLN---I----- 75 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHHHH----HHHHHHTTCS-----------EEEEESCHHHHHHHHHHHTT---C-----
T ss_pred HHHHHHHHHHcC--CcccChhHHHHH----HHHHHHhCCC-----------cEEEeCCHHHHHHHHHHHcC---C-----
Confidence 445555554432 233344444444 5777788875 28999999999988887652 0
Q ss_pred hCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 228 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.+.-.|+++..+|++...++...|++++.||+++++.+|+++|+++|++
T Consensus 76 ----------~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~ 124 (374)
T 3uwc_A 76 ----------GAGDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITD 124 (374)
T ss_dssp ----------CTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCT
T ss_pred ----------CCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCC
Confidence 1122577889999999999999999999999998999999999988754
No 92
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=97.81 E-value=0.00027 Score=65.77 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=74.7
Q ss_pred hhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC
Q psy1678 168 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD 247 (297)
Q Consensus 168 ~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 247 (297)
...++++.+.+|+.+.+|++... .....++|+|||+++..++.+..+ +.-.|+++.
T Consensus 84 g~~~lr~~la~~~~~~~g~~~~~-----~~~~i~~~~G~~~ai~~~~~~~~~-------------------~gd~Vl~~~ 139 (428)
T 1iay_A 84 GLPEFRKAIAKFMEKTRGGRVRF-----DPERVVMAGGATGANETIIFCLAD-------------------PGDAFLVPS 139 (428)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSCC-----CTTSCEEEEHHHHHHHHHHHHHCC-------------------TTCEEEEES
T ss_pred CcHHHHHHHHHHHHHhcCCCCCC-----ChhhEEEccChHHHHHHHHHHhCC-------------------CCCeEEEcc
Confidence 36789999999999888854100 012588999999999988887521 111466788
Q ss_pred CCcchHHHHHH-hcCCceEEeeCCC--CCCcCHHHHHHHHHHHHHCC
Q psy1678 248 QAHSSVERAGL-LGGVTIRGLPADD--SYKLRGDALEAAIEEDLKKG 291 (297)
Q Consensus 248 ~aH~Si~Kaa~-~lg~~v~~Vp~d~--~~~md~~~L~~~i~~~~~~G 291 (297)
.+|.++..++. ..|+.++.||.+. .+.+|+++|+++|++....|
T Consensus 140 p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 186 (428)
T 1iay_A 140 PYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSN 186 (428)
T ss_dssp SCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTT
T ss_pred CCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcC
Confidence 89999887554 7899999999974 46899999999998765555
No 93
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=97.80 E-value=3.1e-05 Score=71.32 Aligned_cols=88 Identities=15% Similarity=0.075 Sum_probs=68.5
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
++...++| +.+++++|.+ .+++|+|||+++..++.+++- .+.-.|++
T Consensus 55 ~~~~~~l~----~~la~~~~~~-----------~~i~~~~gt~al~~~l~~~~~------------------~~gd~vl~ 101 (391)
T 3dr4_A 55 GRFIVEFE----KAFADYCGVK-----------HAIACNNGTTALHLALVAMGI------------------GPGDEVIV 101 (391)
T ss_dssp SHHHHHHH----HHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHTC------------------CTTCEEEE
T ss_pred ChHHHHHH----HHHHHHhCCC-----------cEEEeCCHHHHHHHHHHHcCC------------------CCcCEEEE
Confidence 34444454 4666777775 289999999999999887621 11225778
Q ss_pred cCCCcchHHHHHHhcCCceEEeeCC-CCCCcCHHHHHHHHHH
Q psy1678 246 SDQAHSSVERAGLLGGVTIRGLPAD-DSYKLRGDALEAAIEE 286 (297)
Q Consensus 246 s~~aH~Si~Kaa~~lg~~v~~Vp~d-~~~~md~~~L~~~i~~ 286 (297)
+..+|++...++...|.+++.||+| +++.+|+++|+++|++
T Consensus 102 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~ 143 (391)
T 3dr4_A 102 PSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITP 143 (391)
T ss_dssp ESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCT
T ss_pred CCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCC
Confidence 8999999999999999999999999 6789999999988753
No 94
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=97.80 E-value=0.00012 Score=67.11 Aligned_cols=90 Identities=12% Similarity=-0.017 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+++++++|.++ .+++++||++|..++.+.. .+.-.|+++...
T Consensus 87 ~~~~~~l~~~la~~~~~~~-----------~i~~~sGt~a~~~~l~~~~-------------------~~gd~v~~~~~~ 136 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDD-----------TILYSSCFDANGGLFETLL-------------------GPEDAIISDELN 136 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHTTHHHHC-------------------CTTCEEEEETTC
T ss_pred chHHHHHHHHHHHHHCCCc-----------EEEECchHHHHHHHHHHhc-------------------CCCCEEEECCcc
Confidence 4455567788999998763 5667778999988776531 112357789999
Q ss_pred cchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCcc
Q psy1678 250 HSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIP 294 (297)
Q Consensus 250 H~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~P 294 (297)
|.++..++...|.+++.+|. +|+++|++.|++...+|..+
T Consensus 137 ~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~ 176 (399)
T 3tqx_A 137 HASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARF 176 (399)
T ss_dssp CHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSS
T ss_pred cHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCc
Confidence 99999999999999999986 57889999998876654333
No 95
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=97.77 E-value=5.7e-05 Score=68.81 Aligned_cols=94 Identities=6% Similarity=-0.007 Sum_probs=66.7
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
+|....+..++.+|+++++|.+.+. ...++|+|||+++..++.+..+ ..+ .|++
T Consensus 47 ~~~~~~~~~~~~~~la~~~g~~~~~-------~~i~~~~ggt~al~~~~~~~~~------------------~gd-~vi~ 100 (376)
T 3f0h_A 47 TTEFSSTMLENEKFMLEYAKAPEGS-------KAVFMTCSSTGSMEAVVMNCFT------------------KKD-KVLV 100 (376)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTC-------EEEEESSCHHHHHHHHHHHHCC------------------TTC-CEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc-------eEEEEcCChhHHHHHHHHhccC------------------CCC-eEEE
Confidence 4555567778999999999997531 1244489999999998876521 012 2344
Q ss_pred cCCCcchH--HHHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 246 SDQAHSSV--ERAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 246 s~~aH~Si--~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
+...+++. .+.+...|..++.||++.++.+|+++|++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~ 142 (376)
T 3f0h_A 101 IDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN 142 (376)
T ss_dssp EESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT
T ss_pred EeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc
Confidence 44445543 24567789999999999999999999988653
No 96
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=97.76 E-value=0.00023 Score=65.33 Aligned_cols=101 Identities=14% Similarity=0.014 Sum_probs=71.1
Q ss_pred ccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEE--cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCC
Q psy1678 162 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 239 (297)
Q Consensus 162 ~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~--tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~ 239 (297)
.|...+....+.+.+.+|+...-+.+-+ ...-+| |+|||+++..++.+.+... +
T Consensus 64 ~y~~~~g~~~lr~~la~~~~~~~~~~~~-------~~~v~~~~~~g~~~a~~~~~~~~~~~~-----------------~ 119 (396)
T 2q7w_A 64 NYLGIDGIPEFGRCTQELLFGKGSALIN-------DKRARTAQTPGGTGALRVAADFLAKNT-----------------S 119 (396)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHH-------TTCEEEEEESHHHHHHHHHHHHHHHHS-----------------C
T ss_pred CCCCCCCCHHHHHHHHHHHhcCCCCccc-------cccEEEEecccchhhHHHHHHHHHHhC-----------------C
Confidence 3433445667777777776543222100 014566 9999999999987764320 1
Q ss_pred ceEEEecCCCcchHHHHHHhcCCceEEeeCC--CCCCcCHHHHHHHHHH
Q psy1678 240 NLVGYCSDQAHSSVERAGLLGGVTIRGLPAD--DSYKLRGDALEAAIEE 286 (297)
Q Consensus 240 ~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d--~~~~md~~~L~~~i~~ 286 (297)
.-.|++..-+|++...++...|.+++.+|.+ +++.+|+++|+++|++
T Consensus 120 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 168 (396)
T 2q7w_A 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNE 168 (396)
T ss_dssp CCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTT
T ss_pred CCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHh
Confidence 1146667789999999999999999999996 6789999999999864
No 97
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=97.76 E-value=9e-06 Score=77.08 Aligned_cols=130 Identities=10% Similarity=-0.055 Sum_probs=82.4
Q ss_pred HHHHHHHHHcCCCCCCCCccccccCCCCC-CHHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccc
Q psy1678 114 VMSDIERVIMPGVTHWHSPKFHAYFPTAN-SYPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLA 192 (297)
Q Consensus 114 il~~l~~~~~~~~~~~~~p~~~g~~~s~~-~~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~ 192 (297)
+++.+.++...+...|+.|. |..+.. .....+ + ..-+| ....++.....+....++.+++++ +|.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~p~---h~~~~~~~~~~~~-~--~~d~~-~~~~~d~~~~~~~~~~~~~~~la~-~g~~~---- 73 (446)
T 2x3l_A 6 ILNKLESLNQEEAISLHVPG---HKNMTIGHLSQLS-M--TMDKT-EIPGLDDLHHPEEVILKSMKQVEK-HSDYD---- 73 (446)
T ss_dssp HHHHHHHHHHTTCEEESSST---TTTTTSSSGGGCC-G--GGCCC-SCTTSCCTTSCSSHHHHHHHHHCS-CTTEE----
T ss_pred HHHHHHHHHcCCCeeeeCCC---cCCCCcccchhhh-h--hcccc-CCCCCccccCcchHHHHHHHHHHh-cCCCc----
Confidence 56667777766666777773 332220 101111 1 11122 122222222223345678889999 99863
Q ss_pred cCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeC--C
Q psy1678 193 CSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA--D 270 (297)
Q Consensus 193 ~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~--d 270 (297)
..+||+|||++|..++.++.. +.-.|+++..+|.|+.+++.+.|..++.|++ |
T Consensus 74 ------~v~~~~G~t~a~~~~~~a~~~-------------------~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~ 128 (446)
T 2x3l_A 74 ------GYFLVNGTTSGILSVIQSFSQ-------------------KKGDILMARNVHKSVLHALDISQQEGHFIETHQS 128 (446)
T ss_dssp ------EEEESSHHHHHHHHHHHTTTT-------------------SSSCEEECTTCCHHHHHHHHHHTCCEEECEEEEC
T ss_pred ------eEEEeCCHHHHHHHHHHHhcC-------------------CCCEEEEecCccHHHHHHHHHcCCeEEEEeCeec
Confidence 378999999999999987611 1124778999999999999999999999998 7
Q ss_pred CC----CCcCHHHH
Q psy1678 271 DS----YKLRGDAL 280 (297)
Q Consensus 271 ~~----~~md~~~L 280 (297)
++ +.+|+++|
T Consensus 129 ~~~~~~~~~d~~~l 142 (446)
T 2x3l_A 129 PLTNHYNKVNLSRL 142 (446)
T ss_dssp TTTSSEEEEEC---
T ss_pred cccCcCCCCCHHHH
Confidence 65 68999887
No 98
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=97.75 E-value=9.6e-05 Score=68.10 Aligned_cols=87 Identities=16% Similarity=0.105 Sum_probs=66.3
Q ss_pred chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 167 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
+...++++.+.+|+ |.+++ ..++|+|||+++..++.+..+ +.-.|++.
T Consensus 74 ~~~~~l~~~la~~~----g~~~~---------~v~~~~g~~~al~~~~~~~~~-------------------~gd~Vl~~ 121 (397)
T 2zyj_A 74 EGYAPLRAFVAEWI----GVRPE---------EVLITTGSQQALDLVGKVFLD-------------------EGSPVLLE 121 (397)
T ss_dssp TCCHHHHHHHHHHH----TSCGG---------GEEEESHHHHHHHHHHHHHCC-------------------TTCEEEEE
T ss_pred CCCHHHHHHHHHHh----CCChh---------hEEEeccHHHHHHHHHHHhCC-------------------CCCEEEEe
Confidence 34556666555554 76543 589999999999888876421 11246677
Q ss_pred CCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 247 DQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 247 ~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
..+|.+...++...|.+++.||.++++ +|+++|+++|++
T Consensus 122 ~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~ 160 (397)
T 2zyj_A 122 APSYMGAIQAFRLQGPRFLTVPAGEEG-PDLDALEEVLKR 160 (397)
T ss_dssp ESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHcCCEEEecCcCCCC-CCHHHHHHHHhh
Confidence 789999999999999999999998766 999999999975
No 99
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=97.75 E-value=0.00013 Score=66.93 Aligned_cols=111 Identities=9% Similarity=-0.018 Sum_probs=79.7
Q ss_pred HHHHHHHhccccccccccCchhhH-HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACIGFTWIASPACTE-LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 226 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~-iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~ 226 (297)
+.+.+...++.....|... ... +++.+.+|+.+..|++.+. ..-++|+|||+++..++.+..+
T Consensus 46 v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~-------~~v~~t~g~~~al~~~~~~l~~------- 109 (390)
T 1d2f_A 46 IIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDS-------QTVVYGPSVIYMVSELIRQWSE------- 109 (390)
T ss_dssp HHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCG-------GGEEEESCHHHHHHHHHHHSSC-------
T ss_pred HHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCH-------HHEEEcCCHHHHHHHHHHHhcC-------
Confidence 4455555554322233322 567 8889999999988854211 2589999999999888876421
Q ss_pred hhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCC---CCcCHHHHHHHHHH
Q psy1678 227 EAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDS---YKLRGDALEAAIEE 286 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~---~~md~~~L~~~i~~ 286 (297)
+.-.|++...+|.++..++...|.+++.||++.+ +.+|+++|+++|++
T Consensus 110 ------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~ 160 (390)
T 1d2f_A 110 ------------TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK 160 (390)
T ss_dssp ------------TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS
T ss_pred ------------CCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc
Confidence 1124667788999999999999999999999754 36999999998863
No 100
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=97.74 E-value=7.3e-05 Score=68.57 Aligned_cols=82 Identities=15% Similarity=0.051 Sum_probs=65.4
Q ss_pred HHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHH
Q psy1678 176 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVER 255 (297)
Q Consensus 176 v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~K 255 (297)
+.+.+++++|.+ ..++|+|||+++..++.+.+ . .+.-.|+++..+|++..+
T Consensus 44 l~~~la~~~~~~-----------~~~~~~~gt~al~~~~~~~~---~---------------~~gd~Vl~~~~~~~~~~~ 94 (393)
T 1mdo_A 44 LEAAFCRLTGNQ-----------YAVAVSSATAGMHIALMALG---I---------------GEGDEVITPSMTWVSTLN 94 (393)
T ss_dssp HHHHHHHHHCCS-----------EEEEESCHHHHHHHHHHHTT---C---------------CTTCEEEEESSSCHHHHH
T ss_pred HHHHHHHHhCCC-----------cEEEecChHHHHHHHHHHcC---C---------------CCCCEEEeCCCccHhHHH
Confidence 445666777764 38999999999999988752 1 012257788999999999
Q ss_pred HHHhcCCceEEeeCCCC-CCcCHHHHHHHHHH
Q psy1678 256 AGLLGGVTIRGLPADDS-YKLRGDALEAAIEE 286 (297)
Q Consensus 256 aa~~lg~~v~~Vp~d~~-~~md~~~L~~~i~~ 286 (297)
++...|++++.||+|++ +.+|+++|+++|++
T Consensus 95 ~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~ 126 (393)
T 1mdo_A 95 MIVLLGANPVMVDVDRDTLMVTPEHIEAAITP 126 (393)
T ss_dssp HHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT
T ss_pred HHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC
Confidence 99999999999999875 78999999998864
No 101
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=97.74 E-value=8.7e-05 Score=68.18 Aligned_cols=110 Identities=13% Similarity=0.054 Sum_probs=75.8
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHh
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 227 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~ 227 (297)
+.+.+...+......+........+++.+.+|+.+.+|.+-.. ..-+||+|||+++..++.+..+
T Consensus 49 v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-------~~v~~t~g~~~al~~~~~~l~~-------- 113 (391)
T 3h14_A 49 AVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDP-------GRVVITPGSSGGFLLAFTALFD-------- 113 (391)
T ss_dssp HHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCG-------GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCH-------HHEEEecChHHHHHHHHHHhcC--------
Confidence 3445555554433344444446788999999999998865321 2589999999999988776421
Q ss_pred hCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCC--CCcCHHHHHHH
Q psy1678 228 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDS--YKLRGDALEAA 283 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~--~~md~~~L~~~ 283 (297)
+.-.|+++..+|.+...++..+|.+++.||++++ +.+|+++|+++
T Consensus 114 -----------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (391)
T 3h14_A 114 -----------SGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL 160 (391)
T ss_dssp -----------TTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS
T ss_pred -----------CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc
Confidence 1124667888999999999999999999999864 47899988765
No 102
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=97.74 E-value=0.00019 Score=66.38 Aligned_cols=120 Identities=8% Similarity=-0.071 Sum_probs=77.6
Q ss_pred HHHHHHHhc-c-ccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEE--cCChhHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSI-A-CIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI--QGTASEATLVALLGAKAKTMQ 223 (297)
Q Consensus 148 l~d~l~~~l-N-~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~--tsGGT~anl~Al~~AR~~~~~ 223 (297)
+.+.+...+ + .....|...+....+++.+.+|+....|.+-. ...-+| |+|||+|+..++..++.. .
T Consensus 53 v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~-------~~~v~~~~t~gg~~a~~~~~~~~~~~--~ 123 (412)
T 1ajs_A 53 VRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQ-------EKRVGGVQSLGGTGALRIGAEFLARW--Y 123 (412)
T ss_dssp HHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-------TTCEEEEEEEHHHHHHHHHHHHHHHH--S
T ss_pred HHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccC-------CCcEEEEECCCcHHHHHHHHHHHHHh--C
Confidence 444455444 2 12223433445567777777777554443201 025888 999999999997655432 0
Q ss_pred HHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCc-eEEeeCC--CCCCcCHHHHHHHHHH
Q psy1678 224 RVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVT-IRGLPAD--DSYKLRGDALEAAIEE 286 (297)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~-v~~Vp~d--~~~~md~~~L~~~i~~ 286 (297)
.|.. ..+-.|+++.-+|.+...++...|.+ ++.+|.+ +++.+|+++|+++|++
T Consensus 124 ----~g~~------~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 179 (412)
T 1ajs_A 124 ----NGTN------NKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLEN 179 (412)
T ss_dssp ----SSSS------CCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHH
T ss_pred ----cCcC------CCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHh
Confidence 0100 00023566778999999999999999 9999994 5789999999999975
No 103
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=97.73 E-value=0.00015 Score=66.27 Aligned_cols=114 Identities=9% Similarity=0.006 Sum_probs=79.9
Q ss_pred HHHHHHHhcccc-ccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 226 (297)
Q Consensus 148 l~d~l~~~lN~n-~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~ 226 (297)
+.+.+...+... ...|...+....+++.+.+|+.+.+|.+-+. ....+||+|||+++..++.+..+
T Consensus 43 v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~------~~~v~~~~g~~~a~~~~~~~l~~------- 109 (376)
T 2dou_A 43 PLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP------RREALALIGSQEGLAHLLLALTE------- 109 (376)
T ss_dssp HHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT------TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC------CccEEEcCCcHHHHHHHHHHhcC-------
Confidence 344555555332 1122222356678888888888888986210 01589999999999988876421
Q ss_pred hhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 227 EAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+.-.|++...+|.+...++...|.+++.||+++.+.+|+++|+++|..
T Consensus 110 ------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~ 157 (376)
T 2dou_A 110 ------------PEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWR 157 (376)
T ss_dssp ------------TTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHH
T ss_pred ------------CCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhcc
Confidence 112466788899999999999999999999955567999999998863
No 104
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=97.72 E-value=0.00011 Score=68.52 Aligned_cols=101 Identities=10% Similarity=0.030 Sum_probs=75.5
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|.......++++.+.+|+....|++-+. ..-+||+|||+++..++.+... .. .| .+..
T Consensus 78 y~~~~g~~~lr~~la~~~~~~~g~~~~~-------~~i~~t~g~t~al~~~~~~l~~--~~----~g---------d~~~ 135 (437)
T 3g0t_A 78 YPNLDGLPELKQEASRFAKLFVNIDIPA-------RACVPTVGSMQGCFVSFLVANR--TH----KN---------REYG 135 (437)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCG-------GGEEEESHHHHHHHHHHHHHTT--SC----TT---------CSCC
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc-------ccEEEeCCHHHHHHHHHHHHhc--CC----CC---------CccE
Confidence 3333345788999999999888875321 2589999999999998877530 00 01 1113
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIE 285 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~ 285 (297)
|+++..+|.++..++...|.+++.||+++ .+.+|+++|+++|+
T Consensus 136 Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 136 TLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQ 179 (437)
T ss_dssp EEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHT
T ss_pred EEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHh
Confidence 66678899999999999999999999974 45799999999984
No 105
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=97.70 E-value=0.00018 Score=67.79 Aligned_cols=97 Identities=11% Similarity=0.015 Sum_probs=64.9
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|...+...+++ +++++++|.+ ..+||+|||+||..|+.+++++... .| ..+..
T Consensus 72 y~~~~~~~~l~----~~la~~~~~~-----------~v~~t~ggt~A~~~al~~~~~~~~~----~G--------d~~~~ 124 (467)
T 1ax4_A 72 YAGSRNYYDLK----DKAKELFNYD-----------YIIPAHQGRGAENILFPVLLKYKQK----EG--------KAKNP 124 (467)
T ss_dssp SSSCHHHHHHH----HHHHHHHCCC-----------EEEEESSHHHHHHHHHHHHHHHHHH----TT--------CCSSC
T ss_pred cccCccHHHHH----HHHHHHcCCC-----------cEEEcCCcHHHHHHHHHHHHHhhcc----CC--------Cccce
Confidence 44444444444 5677777764 3899999999999999998764211 11 11112
Q ss_pred EEecCCCcchH-HHHHHhcCCceEEeeCC----------CCCCcCHHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSV-ERAGLLGGVTIRGLPAD----------DSYKLRGDALEAAIEED 287 (297)
Q Consensus 243 i~~s~~aH~Si-~Kaa~~lg~~v~~Vp~d----------~~~~md~~~L~~~i~~~ 287 (297)
|+++ ..||.. ..+....|..++.++.+ .++.+|+++|+++|++.
T Consensus 125 viv~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~ 179 (467)
T 1ax4_A 125 VFIS-NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQH 179 (467)
T ss_dssp EEEE-SSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHH
T ss_pred EEEe-ccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhc
Confidence 4455 677554 56777888888776543 15789999999999863
No 106
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=97.69 E-value=0.00015 Score=67.30 Aligned_cols=114 Identities=9% Similarity=0.026 Sum_probs=81.7
Q ss_pred HHHHHHHhcccc-ccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 226 (297)
Q Consensus 148 l~d~l~~~lN~n-~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~ 226 (297)
+.+.+...+... ...|...+....+++.+.+|+.+.+|.+-+. ....++|+|||+++..++.+..+
T Consensus 65 v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~------~~~v~~t~G~~~al~~~~~~l~~------- 131 (404)
T 2o1b_A 65 IIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK------EDEVCILYGTKNGLVAVPTCVIN------- 131 (404)
T ss_dssp HHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT------TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC------cccEEEcCCcHHHHHHHHHHhcC-------
Confidence 344555544322 2223333456789999999999988986210 01589999999999988886421
Q ss_pred hhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 227 EAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
+.-.|++...+|.++..++...|.+++.||.++ .+.+|+++|+++|+.
T Consensus 132 ------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~ 180 (404)
T 2o1b_A 132 ------------PGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID 180 (404)
T ss_dssp ------------TTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH
T ss_pred ------------CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhcc
Confidence 112466778899999999999999999999986 456999999999863
No 107
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=97.68 E-value=0.00023 Score=66.30 Aligned_cols=85 Identities=16% Similarity=0.073 Sum_probs=67.0
Q ss_pred chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 167 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
+...++| +.+++++|.+ ..++|+|||+++..++.+.+ . | -.|+++
T Consensus 52 ~~~~~l~----~~la~~~~~~-----------~v~~~~ggt~al~~~l~~l~----~-----g-----------d~Vlv~ 96 (424)
T 2po3_A 52 PLVREFE----ERVAGLAGVR-----------HAVATCNATAGLQLLAHAAG----L-----T-----------GEVIMP 96 (424)
T ss_dssp HHHHHHH----HHHHHHHTSS-----------EEEEESCHHHHHHHHHHHHT----C-----C-----------SEEEEE
T ss_pred HHHHHHH----HHHHHHhCCC-----------eEEEeCCHHHHHHHHHHHcC----C-----C-----------CEEEEC
Confidence 4444454 4566666664 38999999999999988752 0 1 147788
Q ss_pred CCCcchHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 247 DQAHSSVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 247 ~~aH~Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
..+|.+...++...|+.++.||+|+ ++.+|+++|+++|++
T Consensus 97 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~ 137 (424)
T 2po3_A 97 SMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTP 137 (424)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCT
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCc
Confidence 9999999999999999999999986 789999999988753
No 108
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=97.67 E-value=0.00032 Score=64.31 Aligned_cols=98 Identities=14% Similarity=0.035 Sum_probs=74.4
Q ss_pred hhhHHHHHHHHHHHHHcCCC-ccccccCCCCC-CeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 168 ACTELEVVMLDWLGKMLDLP-KEFLACSGGKG-GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 168 ~~~~iE~~v~~~l~~llg~~-~~~~~~~~~~~-~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
...++++.+.+|+.+.+|.+ -+ .. .-++|+|||+++..++.+.++. |. ...+-.|++
T Consensus 67 g~~~lr~~la~~l~~~~g~~~~~-------~~~~i~~t~g~~~al~~~~~~~~~~--------g~------~~~~d~vl~ 125 (396)
T 3jtx_A 67 GLPELRQACANWLKRRYDGLTVD-------ADNEILPVLGSREALFSFVQTVLNP--------VS------DGIKPAIVS 125 (396)
T ss_dssp CCHHHHHHHHHHHHHHTTTCCCC-------TTTSEEEESSHHHHHHHHHHHHCCC-----------------CCCCEEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCCCC-------CCCeEEEcCCcHHHHHHHHHHHhCC--------CC------ccCCCEEEE
Confidence 35688899999999999975 11 12 5899999999999988775220 00 000135677
Q ss_pred cCCCcchHHHHHHhcCCceEEeeCCCC-CCcCHHHHHHHHHH
Q psy1678 246 SDQAHSSVERAGLLGGVTIRGLPADDS-YKLRGDALEAAIEE 286 (297)
Q Consensus 246 s~~aH~Si~Kaa~~lg~~v~~Vp~d~~-~~md~~~L~~~i~~ 286 (297)
+.-+|.++..++...|.+++.||++++ +.+|+++|+++|.+
T Consensus 126 ~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~ 167 (396)
T 3jtx_A 126 PNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWK 167 (396)
T ss_dssp EESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH
T ss_pred cCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhcc
Confidence 888999999999999999999999754 47899999998875
No 109
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=97.66 E-value=0.00026 Score=64.40 Aligned_cols=107 Identities=13% Similarity=-0.013 Sum_probs=77.5
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHh
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 227 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~ 227 (297)
+.+.+...+......|...+...++++.+.+|+.+..|.+-+. ...++|+|||+++..++.+..+
T Consensus 47 v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~-------~~v~~~~g~~~a~~~~~~~~~~-------- 111 (370)
T 2z61_A 47 IVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP-------DNIIITGGSSLGLFFALSSIID-------- 111 (370)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG-------GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-------hhEEECCChHHHHHHHHHHhcC--------
Confidence 3444444443322234334456789999999999988865321 2589999999999999887521
Q ss_pred hCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 228 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+.-.|++++.+|.++..++...|.+++.|| +|+++|+++|++
T Consensus 112 -----------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~~ 153 (370)
T 2z61_A 112 -----------DGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALSD 153 (370)
T ss_dssp -----------TTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCCS
T ss_pred -----------CCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhccc
Confidence 112567788999999999999999999888 899999888753
No 110
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=97.65 E-value=0.00038 Score=66.81 Aligned_cols=106 Identities=10% Similarity=-0.044 Sum_probs=78.3
Q ss_pred cccccCchhhHHHHHHHHHHHHHcC-CCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCC
Q psy1678 161 FTWIASPACTELEVVMLDWLGKMLD-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 239 (297)
Q Consensus 161 ~~~~~~p~~~~iE~~v~~~l~~llg-~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~ 239 (297)
..|..+.....+.+.+.+|+.+..| ++-+. ..-++|+|+|+++.+++.+..+ + +..+
T Consensus 123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~-------~~i~~t~G~~~ai~~~~~~l~~----------~-----gd~~ 180 (498)
T 3ihj_A 123 GSYSASQGVNCIREDVAAYITRRDGGVPADP-------DNIYLTTGASDGISTILKILVS----------G-----GGKS 180 (498)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTTTCCCCG-------GGEEEESSHHHHHHHHHHHHCC----------C-----CGGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc-------ccEEEcCCHHHHHHHHHHHHcC----------C-----CCCC
Confidence 4456666677899999999999985 64211 2589999999999888775311 0 0001
Q ss_pred ceEEEecCCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHHHHH
Q psy1678 240 NLVGYCSDQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIEEDL 288 (297)
Q Consensus 240 ~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~~~~ 288 (297)
+-.|+++.-.|.++..++...|..++.+++|+ ++.+|+++|+++|++..
T Consensus 181 ~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~ 231 (498)
T 3ihj_A 181 RTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAK 231 (498)
T ss_dssp SEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHT
T ss_pred CCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhh
Confidence 23677888999999999999999999999986 46999999999998753
No 111
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=97.65 E-value=0.0001 Score=66.71 Aligned_cols=119 Identities=11% Similarity=-0.005 Sum_probs=76.3
Q ss_pred CccccccCCCCCCHHHHHHHHHHHhcc-ccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHH
Q psy1678 131 SPKFHAYFPTANSYPAIVADILSDSIA-CIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEA 209 (297)
Q Consensus 131 ~p~~~g~~~s~~~~~svl~d~l~~~lN-~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~a 209 (297)
+..|+|.-..+ ....++.+++..... .....+...|...++| +++++++|.+. .++++|||++
T Consensus 11 ~~~~l~~~~~p-~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----------~i~~~~G~~a 74 (357)
T 3lws_A 11 QTTGQISGHGK-RNVGVLKTAFAAVADEMASDQYGTGAIIEPFE----QKFADVLGMDD-----------AVFFPSGTMA 74 (357)
T ss_dssp TCSEESSBSSC-CBHHHHHHHHTTSCTTCBCEETTEETTHHHHH----HHHHHHHTCSE-----------EEEESCHHHH
T ss_pred hhcccccCCCC-CCHHHHHHHHHHhhcccCcccccCChHHHHHH----HHHHHHhCCCc-----------EEEecCcHHH
Confidence 34566665544 344555555543211 1112233345555555 57888888753 6888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHH---HHHhcCCceEEeeCCCCCCcCHHHHHHH
Q psy1678 210 TLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVER---AGLLGGVTIRGLPADDSYKLRGDALEAA 283 (297)
Q Consensus 210 nl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~K---aa~~lg~~v~~Vp~d~~~~md~~~L~~~ 283 (297)
|..++.+.... + .+.+|+++...|++..+ .+.+.|..++.||. +++.+|+++|+++
T Consensus 75 ~~~al~~~~~~--------g---------d~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~ 133 (357)
T 3lws_A 75 QQVALRIWSDE--------T---------DNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA-ADRLMTLDEIKAL 133 (357)
T ss_dssp HHHHHHHHHHH--------H---------TCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC-TTSCCCHHHHHTC
T ss_pred HHHHHHHHhhc--------C---------CCcEEEecccceeeeeccchhhhccCcEEEEecC-CCCCcCHHHHhcC
Confidence 99988876432 0 12256778889988866 35566888888885 5678999999876
No 112
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.64 E-value=5.9e-05 Score=70.01 Aligned_cols=109 Identities=11% Similarity=0.038 Sum_probs=79.5
Q ss_pred HHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhh
Q psy1678 149 ADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEA 228 (297)
Q Consensus 149 ~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~ 228 (297)
.+.+ ..+......|...+....+++.+.+|+....|++.+. ...++|+|||+++..++.+...
T Consensus 62 ~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-------~~v~~~~g~t~a~~~~~~~~~~--------- 124 (409)
T 2gb3_A 62 FERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-------ENVLVTNGGSEAILFSFAVIAN--------- 124 (409)
T ss_dssp HHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-------GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred HHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-------HHEEEeCCHHHHHHHHHHHhCC---------
Confidence 4444 5554433344444557889999999999988865321 2589999999999999887511
Q ss_pred CCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHH
Q psy1678 229 HPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIE 285 (297)
Q Consensus 229 ~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~ 285 (297)
+.-.|++++.+|+++..++...|.+++.||+++ .+.+ +++|+++|+
T Consensus 125 ----------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~ 172 (409)
T 2gb3_A 125 ----------PGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN 172 (409)
T ss_dssp ----------TTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC
T ss_pred ----------CCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC
Confidence 112567788999999999999999999999985 4455 777777764
No 113
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=97.64 E-value=0.00014 Score=66.24 Aligned_cols=111 Identities=9% Similarity=-0.048 Sum_probs=77.7
Q ss_pred HHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcCCC--ccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLDLP--KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRV 225 (297)
Q Consensus 148 l~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg~~--~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~ 225 (297)
+.+.+...+. ....|........+++.+.+|+.+.+|.+ ++ .-+||+|||+++..++.+..+.
T Consensus 41 v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~---------~i~~t~g~~~al~~~~~~~~~~----- 105 (376)
T 3ezs_A 41 IQDALKNHTH-SLNIYPKSAFEESLRAAQRGFFKRRFKIELKEN---------ELISTLGSREVLFNFPSFVLFD----- 105 (376)
T ss_dssp HHHHHHTTGG-GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGG---------GEEEESSSHHHHHHHHHHHTTT-----
T ss_pred HHHHHHHhhh-hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHH---------HEEECcCcHHHHHHHHHHHcCC-----
Confidence 3444444442 22233333345788999999999999983 32 5899999999999988775210
Q ss_pred HhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 226 KEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 226 ~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
...-.|++...+|.++..++...|.+++.+|.++++.+++ +|++++.+
T Consensus 106 ------------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~ 153 (376)
T 3ezs_A 106 ------------YQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQ 153 (376)
T ss_dssp ------------CSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHH
T ss_pred ------------CCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhcc
Confidence 0012566788999999999999999999999987655666 66666654
No 114
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.63 E-value=0.00023 Score=65.44 Aligned_cols=83 Identities=13% Similarity=0.087 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
...+..++.+++++++|.+ ..++|+|||+++..++.+..+ +.-.|+++..
T Consensus 86 ~~~~~~~l~~~la~~~g~~-----------~v~~~~ggt~a~~~~~~~~~~-------------------~gd~V~~~~p 135 (398)
T 3a2b_A 86 TLDIHVELEEKLSAYVGKE-----------AAILFSTGFQSNLGPLSCLMG-------------------RNDYILLDER 135 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHSSC-------------------TTCEEEEETT
T ss_pred CcHHHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHhC-------------------CCCEEEECCc
Confidence 3466677889999999974 389999999999998887521 1225778899
Q ss_pred CcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 249 AHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 249 aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.|.+...++...|.+++.||+ +|+++|++.|++
T Consensus 136 ~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~ 168 (398)
T 3a2b_A 136 DHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSR 168 (398)
T ss_dssp CCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHT
T ss_pred cCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHh
Confidence 999999999999999999987 689999998875
No 115
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=97.62 E-value=0.00032 Score=64.39 Aligned_cols=94 Identities=10% Similarity=-0.002 Sum_probs=73.0
Q ss_pred chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 167 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
.....+.+.+.+|+....|.+-+. ..-++|+|||+++..++.+.. . +.-.|+++
T Consensus 68 ~g~~~lr~~ia~~~~~~~g~~~~~-------~~i~~t~g~~~al~~~~~~l~----~---------------~gd~Vlv~ 121 (385)
T 1b5p_A 68 AGIPELREALAEKFRRENGLSVTP-------EETIVTVGGSQALFNLFQAIL----D---------------PGDEVIVL 121 (385)
T ss_dssp TCCHHHHHHHHHHHHHTTCCCCCG-------GGEEEESHHHHHHHHHHHHHC----C---------------TTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCh-------HHEEEcCChHHHHHHHHHHhc----C---------------CCCEEEEc
Confidence 346788888999999888864210 158999999999998887641 1 11246677
Q ss_pred CCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHHH
Q psy1678 247 DQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIEE 286 (297)
Q Consensus 247 ~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~~ 286 (297)
.-+|.++..++...|..++.||+++ ++.+|+++|+++|.+
T Consensus 122 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 163 (385)
T 1b5p_A 122 SPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP 163 (385)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT
T ss_pred CCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC
Confidence 7899999999999999999999985 568999999988753
No 116
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.0001 Score=69.51 Aligned_cols=113 Identities=12% Similarity=0.062 Sum_probs=82.1
Q ss_pred HHHHHHHHhcccc-ccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHH
Q psy1678 147 IVADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRV 225 (297)
Q Consensus 147 vl~d~l~~~lN~n-~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~ 225 (297)
.+.+.+...+... ...|........+++.+.+|+.+.+|.+-+. ...++|+|||+++..++.+..+
T Consensus 74 ~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-------~~v~~t~G~~~al~~~~~~l~~------ 140 (447)
T 3b46_A 74 FAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA-------ENVTVTTGANEGILSCLMGLLN------ 140 (447)
T ss_dssp HHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG-------GGEEEESHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-------hhEEEeCCHHHHHHHHHHHHcC------
Confidence 3455555555542 2234333346788889999999888864211 1589999999999999887521
Q ss_pred HhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCC------------CCCcCHHHHHHHHH
Q psy1678 226 KEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADD------------SYKLRGDALEAAIE 285 (297)
Q Consensus 226 ~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~------------~~~md~~~L~~~i~ 285 (297)
+.-.|++++-.|.+...++...|..++.||+++ ++.+|+++|+++|.
T Consensus 141 -------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 199 (447)
T 3b46_A 141 -------------AGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT 199 (447)
T ss_dssp -------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC
T ss_pred -------------CCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc
Confidence 112466777899999999999999999999865 46899999998875
No 117
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=97.61 E-value=8.1e-05 Score=67.65 Aligned_cols=82 Identities=9% Similarity=-0.041 Sum_probs=66.4
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+.+++++|.+.+ .-++|+|||+++..++.+..+ +.-.|+++..+|.++.
T Consensus 69 ~lr~~la~~~~~~~~---------~v~~~~g~~~a~~~~~~~l~~-------------------~gd~vl~~~~~~~~~~ 120 (365)
T 3get_A 69 ELKSTLAQKYKVQNE---------NIIIGAGSDQVIEFAIHSKLN-------------------SKNAFLQAGVTFAMYE 120 (365)
T ss_dssp HHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHCC-------------------TTCEEEECSSCCTHHH
T ss_pred HHHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHHHhC-------------------CCCEEEEeCCChHHHH
Confidence 455677888888654 589999999999988876411 1125677889999999
Q ss_pred HHHHhcCCceEEeeC-CCCCCcCHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPA-DDSYKLRGDALEAAIE 285 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~-d~~~~md~~~L~~~i~ 285 (297)
.++...|.+++.||+ ++++ +|+++|+++|+
T Consensus 121 ~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~ 151 (365)
T 3get_A 121 IYAKQCGAKCYKTQSITHNL-DEFKKLYETHK 151 (365)
T ss_dssp HHHHHHTCEEEECSSSSCCH-HHHHHHHHHTT
T ss_pred HHHHHcCCEEEEEecCCCCC-CCHHHHHHHhC
Confidence 999999999999999 6788 99999999886
No 118
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=97.60 E-value=0.00017 Score=66.88 Aligned_cols=99 Identities=9% Similarity=0.061 Sum_probs=75.2
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|........+++.+.+|+.+.+|++-.. ...-+||+|||+++..++.+..+ +.-.
T Consensus 63 y~~~~g~~~lr~~la~~~~~~~g~~~~~------~~~i~~~~g~~~a~~~~~~~~~~-------------------~gd~ 117 (422)
T 3fvs_A 63 YTKTFGYPPLTKILASFFGELLGQEIDP------LRNVLVTVGGYGALFTAFQALVD-------------------EGDE 117 (422)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTCCCCH------HHHEEEESHHHHHHHHHHHHHCC-------------------TTCE
T ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCCC------CCcEEEECChHHHHHHHHHHHcC-------------------CCCE
Confidence 3333445788889999999999976210 01489999999999998876511 1124
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeCCC------------CCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPADD------------SYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~------------~~~md~~~L~~~i~~ 286 (297)
|+++..+|.++..++...|.+++.+|++. ++++|+++|++++++
T Consensus 118 vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~ 173 (422)
T 3fvs_A 118 VIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS 173 (422)
T ss_dssp EEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT
T ss_pred EEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC
Confidence 66778899999999999999999999986 447999999988753
No 119
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=97.60 E-value=8.6e-05 Score=67.18 Aligned_cols=80 Identities=15% Similarity=0.049 Sum_probs=66.3
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.+++ .-+||+|||+++..++.+. . .|+++..+|.++.
T Consensus 65 ~l~~~la~~~~~~~~---------~i~~~~g~t~al~~~~~~~------d-----------------~vi~~~~~~~~~~ 112 (361)
T 3ftb_A 65 RLNKSIENYLKLKDI---------GIVLGNGASEIIELSISLF------E-----------------KILIIVPSYAEYE 112 (361)
T ss_dssp HHHHHHHHHHTCCSC---------EEEEESSHHHHHHHHHTTC------S-----------------EEEEEESCCTHHH
T ss_pred HHHHHHHHHhCCCcc---------eEEEcCCHHHHHHHHHHHc------C-----------------cEEEecCChHHHH
Confidence 455677777787543 5899999999999888765 1 3667788999999
Q ss_pred HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.++...|.+++.+|+++++.+++++|+++|++
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~ 144 (361)
T 3ftb_A 113 INAKKHGVSVVFSYLDENMCIDYEDIISKIDD 144 (361)
T ss_dssp HHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT
T ss_pred HHHHHcCCeEEEeecCcccCCCHHHHHHhccC
Confidence 99999999999999999999999999988864
No 120
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=97.58 E-value=7.8e-05 Score=69.98 Aligned_cols=97 Identities=16% Similarity=0.187 Sum_probs=70.7
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
.++...++| +.+++++|.+. .+||++||++|..++.+.+...+.+. . ..+.-.|+
T Consensus 60 ~~~~~~~l~----~~la~~~g~~~-----------~i~~~sGt~a~~~al~~l~~~~~~~~---~-------~~~gd~Vi 114 (437)
T 3bb8_A 60 TGRFNDAFE----KKLGEYLGVPY-----------VLTTTSGSSANLLALTALTSPKLGVR---A-------LKPGDEVI 114 (437)
T ss_dssp SCHHHHHHH----HHHHHHHTCSE-----------EEEESCHHHHHHHHHHHTTCGGGGGG---S-------CCTTCEEE
T ss_pred CChHHHHHH----HHHHHHHCCCc-----------EEEeCCHHHHHHHHHHHhhhcccccc---c-------CCCcCEEE
Confidence 344444454 46677778752 78999999999999988642111100 0 01223577
Q ss_pred ecCCCcchHHHHHHhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 245 CSDQAHSSVERAGLLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 245 ~s~~aH~Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
++..+|.+...++...|+.++.||+++ ++.+|+++|+++|.+
T Consensus 115 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~ 157 (437)
T 3bb8_A 115 TVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSD 157 (437)
T ss_dssp ECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCT
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCC
Confidence 899999999999999999999999986 799999999998853
No 121
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=97.55 E-value=0.00022 Score=65.90 Aligned_cols=82 Identities=15% Similarity=-0.016 Sum_probs=65.3
Q ss_pred HHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHH
Q psy1678 176 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVER 255 (297)
Q Consensus 176 v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~K 255 (297)
+.+.+++++|.+. .++++|||+++..++.+.+ . .+.-.|+++..+|+++.+
T Consensus 68 l~~~la~~~~~~~-----------~v~~~~Gt~a~~~~l~~~~---~---------------~~gd~vl~~~~~~~~~~~ 118 (399)
T 2oga_A 68 FEAEFAAYCETDH-----------AVGVNSGMDALQLALRGLG---I---------------GPGDEVIVPSHTYIASWL 118 (399)
T ss_dssp HHHHHHHHTTSSE-----------EEEESCHHHHHHHHHHHTT---C---------------CTTCEEEEESSSCTHHHH
T ss_pred HHHHHHHHHCCCe-----------EEEecCHHHHHHHHHHHhC---C---------------CCcCEEEECCCccHHHHH
Confidence 4456777788752 7899999999999887752 1 011256778899999999
Q ss_pred HHHhcCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 256 AGLLGGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 256 aa~~lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
++...|.+++.||+++ ++.+|+++|+++|++
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~ 150 (399)
T 2oga_A 119 AVSATGATPVPVEPHEDHPTLDPLLVEKAITP 150 (399)
T ss_dssp HHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT
T ss_pred HHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC
Confidence 9999999999999987 689999999998864
No 122
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=97.50 E-value=0.00071 Score=60.43 Aligned_cols=79 Identities=9% Similarity=-0.021 Sum_probs=64.8
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+.+++++|.+++ .-+||+|+|+++..++.+. + | + .|+++..+|.++.
T Consensus 55 ~lr~~la~~~~~~~~---------~i~~t~G~~~~l~~~~~~~-----~-----g----------d-~vl~~~p~~~~~~ 104 (337)
T 3p1t_A 55 RVMRKLAEHFSCPED---------NLMLVRGIDECFDRISAEF-----S-----S----------M-RFVTAWPGFDGYR 104 (337)
T ss_dssp HHHHHHHHHHTSCGG---------GEEEESHHHHHHHHHHHHS-----T-----T----------S-EEEEESSSCSHHH
T ss_pred HHHHHHHHHhCcCHH---------HEEEeCCHHHHHHHHHHhc-----C-----C----------C-eEEEeCCCcHHHH
Confidence 455677888888754 5899999999988877653 1 1 1 4667889999999
Q ss_pred HHHHhcCCceEEeeCCCCCCcCHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDSYKLRGDALEAA 283 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~ 283 (297)
.++...|++++.||+++++.+|+++|++.
T Consensus 105 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 133 (337)
T 3p1t_A 105 ARIAVSGLRHFEIGLTDDLLLDPNDLAQV 133 (337)
T ss_dssp HHHTTSCCEEEEECBCTTSSBCHHHHTTC
T ss_pred HHHHHcCCEEEEecCCCCCCCCHHHHHhh
Confidence 99999999999999999999999999875
No 123
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=97.49 E-value=0.00029 Score=64.88 Aligned_cols=112 Identities=11% Similarity=-0.007 Sum_probs=79.6
Q ss_pred HHHHHHhcccc-ccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHh
Q psy1678 149 ADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKE 227 (297)
Q Consensus 149 ~d~l~~~lN~n-~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~ 227 (297)
.+.+...+... ...|........+++.+.+|+.+.+|.+-.. ...-++|+|||+++..++.+..+
T Consensus 42 ~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~------~~~i~~~~g~~~a~~~~~~~~~~-------- 107 (410)
T 3e2y_A 42 KEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP------NEEILVAVGAYGSLFNSIQGLVD-------- 107 (410)
T ss_dssp HHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT------TTSEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC------CCCEEEeCCcHHHHHHHHHHhcC--------
Confidence 34444444332 2233333345788889999999998875320 02589999999999998877511
Q ss_pred hCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCC-----------CCCCcCHHHHHHHHH
Q psy1678 228 AHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPAD-----------DSYKLRGDALEAAIE 285 (297)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d-----------~~~~md~~~L~~~i~ 285 (297)
+.-.|+++..+|.+...++...|.+++.||++ .++.+|+++|+++++
T Consensus 108 -----------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~ 165 (410)
T 3e2y_A 108 -----------PGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS 165 (410)
T ss_dssp -----------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC
T ss_pred -----------CCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC
Confidence 11246677889999999999999999999987 466799999998874
No 124
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=97.49 E-value=0.00036 Score=65.54 Aligned_cols=89 Identities=13% Similarity=0.085 Sum_probs=66.0
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
+..++...++++ .+++++|.+ ..++|+|||+||..++.++.+ ..+
T Consensus 71 y~~~~~~~~l~~----~la~~~~~~-----------~~~~~~~gt~a~~~al~~l~~------------------~gd-- 115 (456)
T 2ez2_A 71 YAGSENFYHLER----TVQELFGFK-----------HIVPTHQGRGAENLLSQLAIK------------------PGQ-- 115 (456)
T ss_dssp SSSCHHHHHHHH----HHHHHHCCS-----------EEEEESSHHHHHHHHHHHHCC------------------TTC--
T ss_pred cccChhHHHHHH----HHHHHhCCC-----------cEEEeCCcHHHHHHHHHHhCC------------------CCC--
Confidence 444555555655 556666764 389999999999999877511 123
Q ss_pred EEecCCCc-chHHHHHHhcCCceEEeeCCC----------CCCcCHHHHHHHHHHH
Q psy1678 243 GYCSDQAH-SSVERAGLLGGVTIRGLPADD----------SYKLRGDALEAAIEED 287 (297)
Q Consensus 243 i~~s~~aH-~Si~Kaa~~lg~~v~~Vp~d~----------~~~md~~~L~~~i~~~ 287 (297)
+++..+| .+...++...|..++.|++++ ++.+|+++|+++|++.
T Consensus 116 -i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 170 (456)
T 2ez2_A 116 -YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEK 170 (456)
T ss_dssp -EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHH
T ss_pred -EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhc
Confidence 3456677 777889999999999999874 2799999999999864
No 125
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=97.48 E-value=0.00084 Score=67.33 Aligned_cols=83 Identities=11% Similarity=0.174 Sum_probs=63.2
Q ss_pred HHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHH
Q psy1678 176 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVER 255 (297)
Q Consensus 176 v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~K 255 (297)
+-+.+|+++|.+.. -++|+|+|.||..++.+. .. +.-.|+++..+|.|+..
T Consensus 200 aE~~lA~~fGa~~a----------~~v~nGts~An~~ai~al----~~---------------pGD~VLv~r~~H~S~~~ 250 (715)
T 3n75_A 200 AEQYIARVFNADRS----------YMVTNGTSTANKIVGMYS----AP---------------AGSTILIDRNCHKSLTH 250 (715)
T ss_dssp HHHHHHHHHTCSEE----------EEESSHHHHHHHHHHHHH----CC---------------TTCEEEEESSCCHHHHH
T ss_pred HHHHHHHHhCCCCc----------eEECcHHHHHHHHHHHHh----CC---------------CCCEEEECCCccHHHHH
Confidence 44578999999752 455777789998877764 11 12257789999999999
Q ss_pred HHHhcCCceEEeeCCC-CCC----c-----CHHHHHHHHHHH
Q psy1678 256 AGLLGGVTIRGLPADD-SYK----L-----RGDALEAAIEED 287 (297)
Q Consensus 256 aa~~lg~~v~~Vp~d~-~~~----m-----d~~~L~~~i~~~ 287 (297)
++.+.|..++.++++. ++. + |+++|+++|++.
T Consensus 251 ~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~ 292 (715)
T 3n75_A 251 LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKET 292 (715)
T ss_dssp HHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHS
T ss_pred HHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhC
Confidence 9999999999998763 233 4 899999999864
No 126
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=97.44 E-value=0.00032 Score=64.95 Aligned_cols=113 Identities=9% Similarity=0.081 Sum_probs=77.7
Q ss_pred HHHHHHHhcccc-ccccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHH
Q psy1678 148 VADILSDSIACI-GFTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVK 226 (297)
Q Consensus 148 l~d~l~~~lN~n-~~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~ 226 (297)
+.+.+...+... ...|...+....+++.+.+|+.+..|.+-+. ....++|+|||+++..++.+..+
T Consensus 55 v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~------~~~v~~t~g~~~a~~~~~~~~~~------- 121 (412)
T 2x5d_A 55 IVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP------ESEAIVTIGSKEGLAHLMLATLD------- 121 (412)
T ss_dssp HHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT------TTSEEEESCHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC------CcCEEEcCChHHHHHHHHHHhCC-------
Confidence 344455544332 2234334456788888999998888874210 01589999999999998877411
Q ss_pred hhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCC--CCcCHHHHHHHHH
Q psy1678 227 EAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDS--YKLRGDALEAAIE 285 (297)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~--~~md~~~L~~~i~ 285 (297)
+.-.|+++..+|.++..++...|.+++.||.+++ +.+|+++|+++|+
T Consensus 122 ------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~ 170 (412)
T 2x5d_A 122 ------------HGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI 170 (412)
T ss_dssp ------------TTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE
T ss_pred ------------CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc
Confidence 1124677888999999999999999999999874 3488999988775
No 127
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=97.39 E-value=0.00016 Score=65.83 Aligned_cols=92 Identities=9% Similarity=-0.011 Sum_probs=67.5
Q ss_pred ccccCchhhHHHHHHHHHHHHHc-CCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCc
Q psy1678 162 TWIASPACTELEVVMLDWLGKML-DLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN 240 (297)
Q Consensus 162 ~~~~~p~~~~iE~~v~~~l~~ll-g~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~ 240 (297)
.+...+...++++.+. +++ +.+.+ ..++|+|||++|..++.+..+ +.
T Consensus 58 ~y~~~~g~~~l~~~la----~~~~~~~~~---------~v~~~~g~~~a~~~~~~~l~~-------------------~g 105 (375)
T 3op7_A 58 NYGWIEGSPAFKKSVS----QLYTGVKPE---------QILQTNGATGANLLVLYSLIE-------------------PG 105 (375)
T ss_dssp SSCCTTCCHHHHHHHH----TTSSSCCGG---------GEEEESHHHHHHHHHHHHHCC-------------------TT
T ss_pred CCCCCCChHHHHHHHH----HHhccCChh---------hEEEcCChHHHHHHHHHHhcC-------------------CC
Confidence 3444444556666544 444 34443 589999999999998876411 11
Q ss_pred eEEEecCCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHH
Q psy1678 241 LVGYCSDQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIE 285 (297)
Q Consensus 241 ~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~ 285 (297)
-.|++...+|.+...++...|.+++.||++. .+.+|+++|+++|+
T Consensus 106 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 152 (375)
T 3op7_A 106 DHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIR 152 (375)
T ss_dssp CEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhc
Confidence 2567788999999999999999999999873 56699999999886
No 128
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=97.38 E-value=0.00024 Score=64.69 Aligned_cols=84 Identities=11% Similarity=0.090 Sum_probs=66.1
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+.+++.+|.+++ .-++|+|||+++..++.+..+ ..+-.|+++.-+|.+..
T Consensus 62 ~lr~~la~~~~~~~~---------~v~~~~G~~~ai~~~~~~~~~------------------~g~d~Vl~~~p~~~~~~ 114 (356)
T 1fg7_A 62 AVIENYAQYAGVKPE---------QVLVSRGADEGIELLIRAFCE------------------PGKDAILYCPPTYGMYS 114 (356)
T ss_dssp HHHHHHHHHHTSCGG---------GEEEESHHHHHHHHHHHHHCC------------------TTTCEEEECSSSCTHHH
T ss_pred HHHHHHHHHhCCChH---------HEEEcCCHHHHHHHHHHHHhC------------------CCCCEEEEeCCChHHHH
Confidence 345566777788753 589999999999888876521 01125677889999999
Q ss_pred HHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
.++...|.+++.||.++++.+|+++|+++++
T Consensus 115 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 145 (356)
T 1fg7_A 115 VSAETIGVECRTVPTLDNWQLDLQGISDKLD 145 (356)
T ss_dssp HHHHHHTCEEEECCCCTTSCCCHHHHHTSCT
T ss_pred HHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc
Confidence 9999999999999999888999999988774
No 129
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=97.36 E-value=0.00034 Score=70.48 Aligned_cols=83 Identities=11% Similarity=0.030 Sum_probs=63.2
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++-+.+|+++|.+. .-++|+|+|++|..++.+... +.-.|+++...|.|+.
T Consensus 177 e~e~~lA~~~gae~----------~i~v~nGtt~an~~ai~al~~-------------------pGD~VLv~~~~H~S~~ 227 (730)
T 1c4k_A 177 AAEKHAARVYNADK----------TYFVLGGSSNANNTVTSALVS-------------------NGDLVLFDRNNHKSVY 227 (730)
T ss_dssp HHHHHHHHHTTCSE----------EEEESSHHHHHHHHHHHHHCC-------------------TTCEEEEETTCCHHHH
T ss_pred HHHHHHHHHHCCCc----------EEEECCHHHHHHHHHHHHhcC-------------------CCCEEEEcCCchHHHH
Confidence 45678899999875 367788888999988887411 1125778999999999
Q ss_pred HH-HHhcCCceEEeeCCCC-----CCcCHHHH-----HHHHHH
Q psy1678 255 RA-GLLGGVTIRGLPADDS-----YKLRGDAL-----EAAIEE 286 (297)
Q Consensus 255 Ka-a~~lg~~v~~Vp~d~~-----~~md~~~L-----~~~i~~ 286 (297)
.+ +.+.|..++.++.+.+ |.+|+++| +++|++
T Consensus 228 ~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~ 270 (730)
T 1c4k_A 228 NSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAK 270 (730)
T ss_dssp HHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTT
T ss_pred HHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhc
Confidence 99 8888999988887532 45899999 666653
No 130
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=97.35 E-value=0.0014 Score=61.65 Aligned_cols=98 Identities=14% Similarity=0.094 Sum_probs=58.4
Q ss_pred ccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCC-c
Q psy1678 162 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA-N 240 (297)
Q Consensus 162 ~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~-~ 240 (297)
.|..+|...++| +++++++|.+ ..+||+|||+||..|+.++++..... .|. .+ +
T Consensus 69 ~y~~~~~~~~l~----~~la~~~~~~-----------~v~~t~~gt~A~~~al~~~~~~~~~~---~G~-------~~~d 123 (467)
T 2oqx_A 69 AYSGSRSYYALA----ESVKNIFGYQ-----------YTIPTHQGRGAEQIYIPVLIKKREQE---KGL-------DRSK 123 (467)
T ss_dssp CSSSCHHHHHHH----HHHHHHHCCS-----------EEEEEC--CCSHHHHHHHHHHHHHHH---HCC-------CTTT
T ss_pred eeccCchhHHHH----HHHHHHhCcC-----------cEEEcCCcHHHHHHHHHHHhcccccc---CCC-------Cccc
Confidence 344455544554 4677777764 38999999999999999997642111 110 01 2
Q ss_pred eEEEecCCCcchHHHH-HHhcCCceEEe------eCC----CCCCcCHHHHHHHHHH
Q psy1678 241 LVGYCSDQAHSSVERA-GLLGGVTIRGL------PAD----DSYKLRGDALEAAIEE 286 (297)
Q Consensus 241 ~~i~~s~~aH~Si~Ka-a~~lg~~v~~V------p~d----~~~~md~~~L~~~i~~ 286 (297)
- |+++ ..|+.-..+ ....|..+... +++ .+|.+|+++|+++|++
T Consensus 124 ~-Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~ 178 (467)
T 2oqx_A 124 M-VAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEE 178 (467)
T ss_dssp C-EEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHH
T ss_pred e-EEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHh
Confidence 2 4455 578654333 23345544332 333 4678999999999986
No 131
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=97.34 E-value=7.4e-05 Score=67.59 Aligned_cols=94 Identities=10% Similarity=0.028 Sum_probs=68.5
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCCh-hHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTA-SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGG-T~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
++....+..++.+++++++|.++. ...+||+|+ |+++..++.+.-.. + .+..+|+
T Consensus 43 ~~~~~~~~~~l~~~la~~~g~~~~--------~~v~~~~g~gt~al~~~~~~l~~~--------~--------~~g~~vi 98 (360)
T 1w23_A 43 SQSYEEVHEQAQNLLRELLQIPND--------YQILFLQGGASLQFTMLPMNLLTK--------G--------TIGNYVL 98 (360)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTT--------EEEEEESSHHHHHHHHHHHHHCCT--------T--------CEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEECCcchHHHHHHHHHhcCC--------C--------CcccEEE
Confidence 555566667799999999999631 148899998 99998877653110 0 1223677
Q ss_pred ecCCCcchHHHHHHhcCCceEEeeCCC-CCCcCHHHHHH-HHH
Q psy1678 245 CSDQAHSSVERAGLLGGVTIRGLPADD-SYKLRGDALEA-AIE 285 (297)
Q Consensus 245 ~s~~aH~Si~Kaa~~lg~~v~~Vp~d~-~~~md~~~L~~-~i~ 285 (297)
++..+|++.. .+..+| +++.||+|+ +|.+|+++|++ +|.
T Consensus 99 ~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~ 139 (360)
T 1w23_A 99 TGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLN 139 (360)
T ss_dssp CSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC
T ss_pred ecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccC
Confidence 8888888854 456679 999999986 78899999988 663
No 132
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=97.34 E-value=0.0004 Score=64.26 Aligned_cols=95 Identities=13% Similarity=0.115 Sum_probs=70.1
Q ss_pred CchhhHHHHHHHHHHHHH------cCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCC
Q psy1678 166 SPACTELEVVMLDWLGKM------LDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 239 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~l------lg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~ 239 (297)
.+...++++.+.+|+.+. .|++-. ....++|+|||+++..++.+..+ +
T Consensus 74 ~~~~~~lr~~la~~~~~~~~~~~~~~~~~~-------~~~v~~~~g~~~al~~~~~~l~~-------------------~ 127 (416)
T 1bw0_A 74 TVGSPEAREAVATWWRNSFVHKEELKSTIV-------KDNVVLCSGGSHGILMAITAICD-------------------A 127 (416)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCSTTTGGGCC-------GGGEEEESHHHHHHHHHHHHHCC-------------------T
T ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCC-------cceEEEeCChHHHHHHHHHHhCC-------------------C
Confidence 345677888888888743 232211 02589999999999988877511 1
Q ss_pred ceEEEecCCCcchHHHHHHhcCCceEEeeCCC--CCCcCHHHHHHHHHH
Q psy1678 240 NLVGYCSDQAHSSVERAGLLGGVTIRGLPADD--SYKLRGDALEAAIEE 286 (297)
Q Consensus 240 ~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~--~~~md~~~L~~~i~~ 286 (297)
.-.|+++..+|.++..++...|.+++.||+++ .+.+|+++|+++|++
T Consensus 128 gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 176 (416)
T 1bw0_A 128 GDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD 176 (416)
T ss_dssp TCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT
T ss_pred CCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc
Confidence 12466778899999999999999999999875 378999999998853
No 133
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=97.32 E-value=0.0016 Score=59.72 Aligned_cols=85 Identities=13% Similarity=0.020 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH 250 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH 250 (297)
....++.+.+++++|.++ .+++++||+++..++.+.. . +.-.|+++...|
T Consensus 90 ~~~~~l~~~la~~~g~~~-----------~i~~~sGs~a~~~~~~~~~----~---------------~gd~v~~~~~~~ 139 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGMED-----------AILYSSCFDANGGLFETLL----G---------------AEDAIISDALNH 139 (401)
T ss_dssp HHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHTTHHHHC----C---------------TTCEEEEETTCC
T ss_pred HHHHHHHHHHHHHhCCCc-----------EEEeCChHHHHHHHHHHHc----C---------------CCCEEEEcchhH
Confidence 445567778888888862 5677778999998776641 1 112567788999
Q ss_pred chHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHC
Q psy1678 251 SSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKK 290 (297)
Q Consensus 251 ~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~ 290 (297)
.+...++...|..++.+|. +|+++|++.|++...+
T Consensus 140 ~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~ 174 (401)
T 1fc4_A 140 ASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREA 174 (401)
T ss_dssp HHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhcc
Confidence 9999999999999988873 5899999999875543
No 134
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=97.32 E-value=0.0003 Score=63.59 Aligned_cols=80 Identities=16% Similarity=0.042 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.+. .+|++|||++|..++.+..... .+.+|+++...|++..
T Consensus 52 ~l~~~la~~~~~~~-----------~i~~~~g~~a~~~a~~~~~~~g-----------------~~~vvi~~~~~~~~~~ 103 (359)
T 3pj0_A 52 DFETKIAKILGKQS-----------AVFFPSGTMAQQIALRIWADRK-----------------ENRRVAYHPLSHLEIH 103 (359)
T ss_dssp HHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHHHHH-----------------TCCEEEECTTCHHHHS
T ss_pred HHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHHhcC-----------------CCcEEEEeccceeeeh
Confidence 45568888998864 5888999999999988865421 1235677888898876
Q ss_pred HH---HHhcCCceEEeeCCCCCCcCHHHHHHH
Q psy1678 255 RA---GLLGGVTIRGLPADDSYKLRGDALEAA 283 (297)
Q Consensus 255 Ka---a~~lg~~v~~Vp~d~~~~md~~~L~~~ 283 (297)
.. +...|..++.||. +++.+|+++|+++
T Consensus 104 ~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~ 134 (359)
T 3pj0_A 104 EQDGLKELQQITPLLLGT-ANQLLTIDDIKSL 134 (359)
T ss_dssp STTHHHHHHCCEEEECSC-TTSCCCHHHHHTC
T ss_pred hcchHHHhcCceEEecCC-cCCCcCHHHHHhc
Confidence 43 2456999999988 5689999999876
No 135
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=97.30 E-value=0.0014 Score=60.58 Aligned_cols=78 Identities=15% Similarity=0.085 Sum_probs=60.6
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.+. .+++++||++|..++.+..+ +.-.|+++...|.+..
T Consensus 108 ~l~~~la~~~g~~~-----------~i~~~sGt~a~~~~l~~~~~-------------------~gd~Vl~~~~~~~~~~ 157 (409)
T 3kki_A 108 MIEKRLAKFTGFDE-----------CLLSQSGWNANVGLLQTICQ-------------------PNTNVYIDFFAHMSLW 157 (409)
T ss_dssp HHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHCC-------------------TTCEEEEETTSCHHHH
T ss_pred HHHHHHHHHhCCCe-----------EEEecchHHHHHHHHHHhcC-------------------CCCEEEECCCcCHHHH
Confidence 34567788888764 57778889999988875411 1225678999999999
Q ss_pred HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDSYKLRGDALEAAIEED 287 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~ 287 (297)
.++.+.|.+++.++. +|+++|+++|++.
T Consensus 158 ~~~~~~g~~~~~~~~-----~d~~~le~~l~~~ 185 (409)
T 3kki_A 158 EGARYANAQAHPFMH-----NNCDHLRMLIQRH 185 (409)
T ss_dssp HHHHHTTCEEEEECT-----TCHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEecC-----CCHHHHHHHHHhc
Confidence 999999999888765 6899999999864
No 136
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=97.29 E-value=0.00025 Score=63.85 Aligned_cols=89 Identities=15% Similarity=0.159 Sum_probs=63.2
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
+...|...++| +++++++|.+. .++|+|||++|..++.+.. . +.-.
T Consensus 34 y~~~~~~~~l~----~~la~~~g~~~-----------~~~~~~gt~a~~~~~~~~~----~---------------~gd~ 79 (347)
T 1jg8_A 34 YGEDPTINELE----RLAAETFGKEA-----------ALFVPSGTMGNQVSIMAHT----Q---------------RGDE 79 (347)
T ss_dssp GTCCHHHHHHH----HHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHC----C---------------TTCE
T ss_pred cCCChHHHHHH----HHHHHHhCCce-----------EEEecCcHHHHHHHHHHhc----C---------------CCCE
Confidence 33344444444 57788888753 7899999999988876531 0 1124
Q ss_pred EEecCCCcchHHH---HHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVER---AGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~K---aa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
|+++..+|++... ++...|.+++.| .+++|.+|+++|+++|++
T Consensus 80 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~ 125 (347)
T 1jg8_A 80 VILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRP 125 (347)
T ss_dssp EEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCC
T ss_pred EEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhcc
Confidence 6678889987654 567789998888 667888999999998853
No 137
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=97.29 E-value=0.00056 Score=63.76 Aligned_cols=98 Identities=14% Similarity=0.032 Sum_probs=71.4
Q ss_pred hhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC
Q psy1678 168 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD 247 (297)
Q Consensus 168 ~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 247 (297)
+...+-+.+.+|+.+..|.+......+.+...-++|+|||+++..++.+..+ +.-.|++.+
T Consensus 79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-------------------~gd~Vlv~~ 139 (425)
T 2r2n_A 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-------------------PGDNVLLDE 139 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-------------------TTCEEEEES
T ss_pred CCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-------------------CCCEEEEeC
Confidence 3446677788899888887631000000001489999999999888877411 112466788
Q ss_pred CCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 248 QAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 248 ~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
-+|.+...++...|.+++.||++++| +|+++|+++|+
T Consensus 140 p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~ 176 (425)
T 2r2n_A 140 PAYSGTLQSLHPLGCNIINVASDESG-IVPDSLRDILS 176 (425)
T ss_dssp SCCHHHHHHHGGGTCEEEEECEETTE-ECHHHHHHHHT
T ss_pred CCcHHHHHHHHHcCCEEEEeCcCCCC-CCHHHHHHHHH
Confidence 89999999999999999999998765 99999999986
No 138
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=97.29 E-value=0.0011 Score=61.77 Aligned_cols=91 Identities=10% Similarity=0.024 Sum_probs=70.5
Q ss_pred hhhHHHHHHHHHHHHHc-CCCccccccCCCCCC---eEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEE
Q psy1678 168 ACTELEVVMLDWLGKML-DLPKEFLACSGGKGG---GVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVG 243 (297)
Q Consensus 168 ~~~~iE~~v~~~l~~ll-g~~~~~~~~~~~~~~---G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i 243 (297)
....+++.+.+|+.+.. +.+++ . -++|+|||+++..++.+..+ +.-.|
T Consensus 89 g~~~lr~~ia~~~~~~~~~~~~~---------~~~~i~~t~g~~~al~~~~~~l~~-------------------~gd~V 140 (430)
T 2x5f_A 89 GIEELRDLWQQKMLRDNPELSID---------NMSRPIVTNALTHGLSLVGDLFVN-------------------QDDTI 140 (430)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCGG---------GBCCCEEESHHHHHHHHHHHHHCC-------------------TTCEE
T ss_pred CCHHHHHHHHHHHhccCcccCCC---------ccceEEEcCCchHHHHHHHHHHhC-------------------CCCEE
Confidence 46678887878876663 33332 4 78999999999988876521 11246
Q ss_pred EecCCCcchHHHHHHh-cCCceEEeeCCC-CCCcCHHHHHHHHHH
Q psy1678 244 YCSDQAHSSVERAGLL-GGVTIRGLPADD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 244 ~~s~~aH~Si~Kaa~~-lg~~v~~Vp~d~-~~~md~~~L~~~i~~ 286 (297)
++++-+|.+...++.. .|.+++.+|+++ ++.+|+++|+++|++
T Consensus 141 l~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~ 185 (430)
T 2x5f_A 141 LLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQS 185 (430)
T ss_dssp EEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHH
T ss_pred EEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHh
Confidence 6788899999999999 999999999976 578999999999975
No 139
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.24 E-value=0.00082 Score=61.88 Aligned_cols=92 Identities=10% Similarity=0.004 Sum_probs=58.6
Q ss_pred chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 167 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
+....+|..+.+++++++|.+.. -+++++||++|..++.+..+ +.-.|+++
T Consensus 67 ~~~~~~~~~~~~~la~~~g~~~~----------~i~~~sGt~a~~~~~~~~~~-------------------~gd~vl~~ 117 (417)
T 3n0l_A 67 EFVDEIETLAIERCKKLFNCKFA----------NVQPNSGSQANQGVYAALIN-------------------PGDKILGM 117 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHSC-------------------TTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhCCCCc----------ceEeccHHHHHHHHHHHhcC-------------------CCCEEEec
Confidence 45568898899999999998653 34445559999998877511 11246677
Q ss_pred CCCcchHHH---HHHhcCC--ceEEeeCCCCCCcCHHHHHHHHHHH
Q psy1678 247 DQAHSSVER---AGLLGGV--TIRGLPADDSYKLRGDALEAAIEED 287 (297)
Q Consensus 247 ~~aH~Si~K---aa~~lg~--~v~~Vp~d~~~~md~~~L~~~i~~~ 287 (297)
..+|.++.. .....|. .++.+++++++.+|+++|+++|++.
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 163 (417)
T 3n0l_A 118 DLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE 163 (417)
T ss_dssp CC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhc
Confidence 788877655 3344444 5667778888999999999999753
No 140
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=97.20 E-value=0.0017 Score=59.87 Aligned_cols=82 Identities=12% Similarity=0.017 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
...-.++.+++++++|.++ .+++++||++|..++.+... +.-.|+++..+
T Consensus 63 ~~~~~~l~~~la~~~g~~~-----------~i~~~sG~~a~~~~l~~~~~-------------------~gd~vi~~~~~ 112 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGEA-----------GLATASGISAITTTLLTLCQ-------------------QGDHIVSASAI 112 (398)
T ss_dssp CHHHHHHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHCC-------------------TTCEEEEESSS
T ss_pred ChHHHHHHHHHHHHhCCCc-----------EEEECCHHHHHHHHHHHHhC-------------------CCCEEEEcCCC
Confidence 3444567789999999862 67888899999999887611 11257788999
Q ss_pred cchHHHHH----HhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 250 HSSVERAG----LLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa----~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
|.++..++ ...|..++.||++ |+++|+++|++
T Consensus 113 ~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~ 148 (398)
T 2rfv_A 113 YGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRP 148 (398)
T ss_dssp CHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCT
T ss_pred cccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCC
Confidence 99998876 7789999999886 78888888753
No 141
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=97.18 E-value=0.00094 Score=61.92 Aligned_cols=90 Identities=11% Similarity=-0.018 Sum_probs=63.5
Q ss_pred HHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHH--HHHHHHHHHHHHHHHhhCC--CCCCcCCCCceEEEecCCCcc
Q psy1678 176 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL--VALLGAKAKTMQRVKEAHP--DWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 176 v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl--~Al~~AR~~~~~~~~~~~~--~~~~~~~~~~~~i~~s~~aH~ 251 (297)
+.+.+++.++.+++ .-++|+|||+++. .++.+..+.. + |. .|.+ ..-.|++..-+|.
T Consensus 75 lr~~ia~~~~~~~~---------~i~~t~G~~~al~~~~~~~~l~~~~-~-----g~~~~~~~----~gd~Vlv~~p~y~ 135 (423)
T 3ez1_A 75 ARALFAGYLDVKAE---------NVLVWNNSSLELQGLVLTFALLHGV-R-----GSTGPWLS----QTPKMIVTVPGYD 135 (423)
T ss_dssp HHHHHHHHTTSCGG---------GEEECSSCHHHHHHHHHHHHHHTCC-T-----TCSSCGGG----GCCEEEEEESCCH
T ss_pred HHHHHHHHhCCChh---------hEEEeCCcHHHHHHHHHHHHHhccC-C-----CccccccC----CCCEEEEcCCCcH
Confidence 34456666687654 5899999999997 5555432100 0 00 0000 0135677889999
Q ss_pred hHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 252 SVERAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 252 Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
....++...|.+++.||++++| +|+++|+++|+
T Consensus 136 ~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~ 168 (423)
T 3ez1_A 136 RHFLLLQTLGFELLTVDMQSDG-PDVDAVERLAG 168 (423)
T ss_dssp HHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEeccCCCCC-CCHHHHHHHHh
Confidence 9999999999999999999875 99999999985
No 142
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=97.17 E-value=0.00057 Score=63.81 Aligned_cols=97 Identities=13% Similarity=0.065 Sum_probs=68.4
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|...+...++++.+.+++... |.+-. ...-++|+|||+++..++.+.++ +.-.
T Consensus 92 y~~~~g~~~lr~~la~~~~~~-~~~~~-------~~~v~~t~g~t~al~~~~~~l~~-------------------~gd~ 144 (427)
T 3dyd_A 92 YAPSIGFLSSREEIASYYHCP-EAPLE-------AKDVILTSGCSQAIDLCLAVLAN-------------------PGQN 144 (427)
T ss_dssp CCCTTCCHHHHHHHHHHHCBT-TBCCC-------GGGEEEESSHHHHHHHHHHHHCC-------------------TTCE
T ss_pred CCCCCCcHHHHHHHHHHHhhc-CCCCC-------hHHEEEecCcHHHHHHHHHHhcC-------------------CCCE
Confidence 333444556666555555433 33211 02589999999999998887521 1124
Q ss_pred EEecCCCcchHHHHHHhcCCceEEeeCC--CCCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVERAGLLGGVTIRGLPAD--DSYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d--~~~~md~~~L~~~i~~ 286 (297)
|+++.-+|.....++...|++++.+|.+ .++.+|+++|++.|++
T Consensus 145 vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 190 (427)
T 3dyd_A 145 ILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE 190 (427)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT
T ss_pred EEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc
Confidence 6778889999999999999999999986 3678999999887753
No 143
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=97.16 E-value=0.0016 Score=60.06 Aligned_cols=86 Identities=16% Similarity=0.090 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
.-.++.+++++++|.+.+ ..+||+|||+++..++.+++..... + . ..+-+|+++...|.
T Consensus 72 ~~~~l~~~la~~~g~~~~---------~v~~~~g~t~al~~al~~~~~~~~~--~--~--------~gd~vii~~~~~~~ 130 (416)
T 1qz9_A 72 LSERLGNRLATLIGARDG---------EVVVTDTTSINLFKVLSAALRVQAT--R--S--------PERRVIVTETSNFP 130 (416)
T ss_dssp HHHHHHHHHHTTTTCCTT---------SEEECSCHHHHHHHHHHHHHHHHHH--H--S--------TTCCEEEEETTSCH
T ss_pred HHHHHHHHHHHHcCCCcc---------cEEEeCChhHHHHHHHHhhcccccc--c--C--------CCCcEEEEcCCCCC
Confidence 444688899999998643 5889999999998888887642110 0 0 11235777888999
Q ss_pred hHHHHHH----hc--CCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 252 SVERAGL----LG--GVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 252 Si~Kaa~----~l--g~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
|...+.. .. |.+++.||+ +++|+++|.
T Consensus 131 ~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~ 163 (416)
T 1qz9_A 131 TDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAID 163 (416)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCS
T ss_pred chHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhC
Confidence 8776543 23 888887775 555555553
No 144
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=97.15 E-value=0.0022 Score=58.84 Aligned_cols=92 Identities=16% Similarity=0.058 Sum_probs=64.9
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
++.+.++-.++.+++++++|.++ .-+||+|||++|..++... .. .+ .|++
T Consensus 30 ~~~~~~~~~~~~~~l~~~~~~~~----------~v~~~~sgt~a~~~~~~~~-----~~--------------gd-~vi~ 79 (379)
T 3ke3_A 30 SKAFQEVMNDLLSNLKTVYNAEA----------AVIIPGSGTYGMEAVARQL-----TI--------------DE-DCLI 79 (379)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSE----------EEEEESCHHHHHHHHHHHH-----CT--------------TC-EEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCC----------EEEEcCChhHHHHHHHHhC-----CC--------------CC-eEEE
Confidence 56666777789999999999873 4788999999998875321 10 11 3555
Q ss_pred cCCCcchH--HHHHHhcCC--ceEEeeCCCC---------CCcCHHHHHHHHHHH
Q psy1678 246 SDQAHSSV--ERAGLLGGV--TIRGLPADDS---------YKLRGDALEAAIEED 287 (297)
Q Consensus 246 s~~aH~Si--~Kaa~~lg~--~v~~Vp~d~~---------~~md~~~L~~~i~~~ 287 (297)
++..|++. ...+...|+ .++.++++.. +.+|+++|+++|++.
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~ 134 (379)
T 3ke3_A 80 IRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKED 134 (379)
T ss_dssp EECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHH
T ss_pred EeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhc
Confidence 66777764 344555665 7788887642 369999999999753
No 145
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=97.15 E-value=0.0061 Score=55.86 Aligned_cols=82 Identities=12% Similarity=0.013 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
...++.+.+++++|.++ .-++|+| +.+|+.++.+..... +.-.|+++...|.
T Consensus 92 ~~~~l~~~la~~~~~~~----------~i~~~sG-~~a~~~~~~~l~~~~-----------------~gd~Vl~~~~~~~ 143 (401)
T 2bwn_A 92 YHRRLEAEIAGLHQKEA----------ALVFSSA-YNANDATLSTLRVLF-----------------PGLIIYSDSLNHA 143 (401)
T ss_dssp HHHHHHHHHHHHTTCSE----------EEEESCH-HHHHHHHHHHHHHHS-----------------TTCEEEEETTCCH
T ss_pred HHHHHHHHHHHHhCCCc----------EEEECCc-HHHHHHHHHHHhcCC-----------------CCCEEEECchhhH
Confidence 33456677888888753 3556555 558888776542210 1125777889999
Q ss_pred hHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 252 SVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 252 Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
++..++...|..++.||.+ |+++|++.|++
T Consensus 144 ~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~ 173 (401)
T 2bwn_A 144 SMIEGIKRNAGPKRIFRHN-----DVAHLRELIAA 173 (401)
T ss_dssp HHHHHHHHSCCCEEEECTT-----CHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHh
Confidence 9999999999999999986 79999998875
No 146
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=97.13 E-value=0.0014 Score=62.97 Aligned_cols=98 Identities=12% Similarity=0.001 Sum_probs=53.5
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
..+...++|..+.+++++++|.+.... ..-+++++||+||+.++.+. +. +.-.|+
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~------~~~v~~~sGt~An~~al~al----~~---------------pGD~Vl 148 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQW------GVNVQPYSGSPANLAVYTAL----LQ---------------PHDRIM 148 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTE------EEECCCSSHHHHHHHHHHHH----CC---------------SCEECC
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccC------ceEEeCCchHHHHHHHHHHH----cC---------------CCCEec
Confidence 346667999999999999999975310 01456779999999988764 11 112345
Q ss_pred ecCCCcc------hHH--HHHHhcCCc--eEEeeCC-CCCCcCHHHHHHHHHHH
Q psy1678 245 CSDQAHS------SVE--RAGLLGGVT--IRGLPAD-DSYKLRGDALEAAIEED 287 (297)
Q Consensus 245 ~s~~aH~------Si~--Kaa~~lg~~--v~~Vp~d-~~~~md~~~L~~~i~~~ 287 (297)
++...|. ++. +++.+.|.. ++.+++| ++|.+|+++|+++|.+.
T Consensus 149 ~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~ 202 (490)
T 2a7v_A 149 GLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF 202 (490)
T ss_dssp C-------------------------------CCBCTTTCSBCHHHHHHHHHHH
T ss_pred ccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhc
Confidence 5554443 322 234456654 4455566 57999999999999753
No 147
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=97.12 E-value=0.00028 Score=64.83 Aligned_cols=92 Identities=8% Similarity=0.054 Sum_probs=65.2
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
.|....+|+.+.+++++++|.+.. -+++++||++|..++.++.. +.-.|++
T Consensus 64 ~~~~~~l~~~~r~~la~~~g~~~~----------~i~~~sGt~a~~~a~~~~~~-------------------~gd~Vl~ 114 (405)
T 2vi8_A 64 CEYVDIVEELARERAKQLFGAEHA----------NVQPHSGAQANMAVYFTVLE-------------------HGDTVLG 114 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCC-------------------TTCEEEE
T ss_pred chHHHHHHHHHHHHHHHHhCCCce----------EEEecCcHHHHHHHHHHhcC-------------------CCCEEEE
Confidence 355678888899999999998752 34455569999999887621 1124566
Q ss_pred cCCCcchHHH-HH--HhcC--CceEEeeCC-CCCCcCHHHHHHHHHH
Q psy1678 246 SDQAHSSVER-AG--LLGG--VTIRGLPAD-DSYKLRGDALEAAIEE 286 (297)
Q Consensus 246 s~~aH~Si~K-aa--~~lg--~~v~~Vp~d-~~~~md~~~L~~~i~~ 286 (297)
+...|.+... ++ ...| +.++.++++ +++.+|+++|+++|++
T Consensus 115 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~ 161 (405)
T 2vi8_A 115 MNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARL 161 (405)
T ss_dssp ECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH
T ss_pred ecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHh
Confidence 7778877653 11 2334 367777776 6789999999999975
No 148
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=97.10 E-value=0.0011 Score=61.54 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=61.7
Q ss_pred HHHHHHHcCCCccccccCCCCCCeEEcCChhHHHH--HHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 177 LDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL--VALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 177 ~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl--~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
.+.+++.++.+++ .-++|+|+|+++. .++.+..+.. + + ....|.. .+.-.|++.+-+|.+..
T Consensus 84 r~~ia~~~~~~~~---------~i~~t~G~~~al~~~~~~~~l~~~~-~--g-~~~~~~~---~~gd~V~v~~p~y~~~~ 147 (427)
T 3ppl_A 84 RQIWADLLGVPVE---------QVLAGDASSLNIMFDVISWSYIFGN-N--D-SVQPWSK---EETVKWICPVPGYDRHF 147 (427)
T ss_dssp HHHHHHHHTSCGG---------GEEECSSCHHHHHHHHHHHHHHHCC-T--T-CSSCGGG---SSCCEEEEEESCCHHHH
T ss_pred HHHHHHHhCCCcc---------eEEEeCCcHHHHHHHHHHHHHhccC-C--c-ccccccC---CCCCEEEEcCCCcHHHH
Confidence 3445555577654 5899999999994 4444432200 0 0 0000000 00225667889999999
Q ss_pred HHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 255 RAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
.++...|.+++.||+|++| +|+++|+++|+
T Consensus 148 ~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~ 177 (427)
T 3ppl_A 148 SITERFGFEMISVPMNEDG-PDMDAVEELVK 177 (427)
T ss_dssp HHHHHTTCEEEEEEEETTE-ECHHHHHHHTT
T ss_pred HHHHHcCCEEEEeCCCCCC-CCHHHHHHHHh
Confidence 9999999999999999876 99999999883
No 149
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=97.08 E-value=0.0034 Score=57.11 Aligned_cols=81 Identities=11% Similarity=0.055 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH 250 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH 250 (297)
....++.+.+++++|.++ .+++++||+++..++.+.. . +.-.|+++...|
T Consensus 84 ~~~~~l~~~la~~~g~~~-----------~i~~~sGt~a~~~~~~~~~----~---------------~gd~v~~~~~~~ 133 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSR-----------ALLFISGFAANQAVIAAMM----A---------------KEDRIAADRLSH 133 (384)
T ss_dssp HHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHC----C---------------TTCEEEEETTCC
T ss_pred HHHHHHHHHHHHHhCCCc-----------EEEeCCcHHHHHHHHHHhC----C---------------CCcEEEEccccc
Confidence 445567778888888863 6677777999999877631 1 112567888999
Q ss_pred chHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 251 SSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 251 ~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.+...++...|.+++.+|. +|+++|++.|++
T Consensus 134 ~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~ 164 (384)
T 1bs0_A 134 ASLLEAASLSPSQLRRFAH-----NDVTHLARLLAS 164 (384)
T ss_dssp HHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHh
Confidence 9999999999999999884 589999988864
No 150
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=97.06 E-value=0.00035 Score=64.23 Aligned_cols=91 Identities=10% Similarity=0.040 Sum_probs=64.4
Q ss_pred chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 167 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
|....+|..+.+++++++|.+.. -+++++||+++..++.++.. +.-.|+++
T Consensus 65 ~~~~~~e~~ar~~la~~~g~~~~----------~i~~~sGt~a~~~~~~~~~~-------------------~gd~Vl~~ 115 (407)
T 2dkj_A 65 EVIDRVESLAIERAKALFGAAWA----------NVQPHSGSQANMAVYMALME-------------------PGDTLMGM 115 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCC-------------------TTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc----------eEEecchHHHHHHHHHHhcC-------------------CCCEEEEe
Confidence 33447887778899999998752 35566678899988887621 11256677
Q ss_pred CCCcchH---HHHHHhcCCceEEeeC--C-CCCCcCHHHHHHHHHH
Q psy1678 247 DQAHSSV---ERAGLLGGVTIRGLPA--D-DSYKLRGDALEAAIEE 286 (297)
Q Consensus 247 ~~aH~Si---~Kaa~~lg~~v~~Vp~--d-~~~~md~~~L~~~i~~ 286 (297)
..+|.+. ..++...|..++.+++ + +++.+|+++|+++|++
T Consensus 116 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 161 (407)
T 2dkj_A 116 DLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALE 161 (407)
T ss_dssp CGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHH
T ss_pred cccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhh
Confidence 8888877 4566666764455554 5 3789999999999975
No 151
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=97.06 E-value=0.0032 Score=58.07 Aligned_cols=102 Identities=8% Similarity=-0.103 Sum_probs=69.1
Q ss_pred ccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCe--EEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCC
Q psy1678 162 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGG--VIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIA 239 (297)
Q Consensus 162 ~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G--~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~ 239 (297)
.|...+....+++.+.+|+. |...... ....- ..|+|||+++..+..+.+... .+
T Consensus 74 ~y~~~~g~~~lr~~ia~~~~---~~~~~~~----~~~~i~~~~~~~g~ga~~~~~~~~~~~~----------------~~ 130 (409)
T 4eu1_A 74 DYAPVTGIASFVEEAQKLCF---GPTCAAL----RDGRIASCQTLGGTGALRIGGDLLNRFV----------------AN 130 (409)
T ss_dssp CCCCTTCCHHHHHHHHHHHH---CSSCHHH----HTTCEEEEEESHHHHHHHHHHHHGGGTS----------------SS
T ss_pred cCCCCCCcHHHHHHHHHHHc---CCCchhh----ccCceeeeecccchHHHHHHHHHHHHhc----------------CC
Confidence 34444455677777777773 4331000 00122 459999999987765543211 11
Q ss_pred ceEEEecCCCcchHHHHHHhcCCceEEeeC--CCCCCcCHHHHHHHHHH
Q psy1678 240 NLVGYCSDQAHSSVERAGLLGGVTIRGLPA--DDSYKLRGDALEAAIEE 286 (297)
Q Consensus 240 ~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~--d~~~~md~~~L~~~i~~ 286 (297)
.-.|+++.-+|.+...++...|.+++.+|+ ++++.+|+++|++.|++
T Consensus 131 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 179 (409)
T 4eu1_A 131 CNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDK 179 (409)
T ss_dssp CCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHH
T ss_pred CCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHh
Confidence 125677889999999999999999999998 35789999999999975
No 152
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=97.01 E-value=0.0056 Score=56.95 Aligned_cols=90 Identities=16% Similarity=0.068 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+++++++|.+ ..+||+|||+||..|++++|.+...+ +.. .+.-+|+....-
T Consensus 98 ~~~~~~l~~~la~~~g~~-----------~v~~~~ggteA~~~al~~~~~~~~~~-~~~---------g~~~vi~~~~~y 156 (420)
T 2pb2_A 98 NEPALRLGRKLIDATFAE-----------RVLFMNSGTEANETAFKLARHYACVR-HSP---------FKTKIIAFHNAF 156 (420)
T ss_dssp CHHHHHHHHHHHHHSSCS-----------EEEEESSHHHHHHHHHHHHHHHHHHH-TCT---------TCCEEEEETTCC
T ss_pred CHHHHHHHHHHHhhCCCC-----------eEEEeCCHHHHHHHHHHHHHHHhhhc-cCC---------CCCEEEEEeCCc
Confidence 345556777888888742 38999999999999999998754321 100 112355555677
Q ss_pred cchHHHHHHhcCCc------------eEEeeCCCCCCcCHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGVT------------IRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 250 H~Si~Kaa~~lg~~------------v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
|.+...++.+.|.. ++.+|.+ |+++|+++|+
T Consensus 157 h~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~ 199 (420)
T 2pb2_A 157 HGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMD 199 (420)
T ss_dssp CCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCC
T ss_pred CCcCHHHHHhcCCccccccCCCCCCCeEEecCC-----CHHHHHHHhc
Confidence 77777777666642 5555543 6777777664
No 153
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=97.01 E-value=0.003 Score=58.42 Aligned_cols=91 Identities=15% Similarity=-0.016 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHcCCCc-cccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 171 ELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~-~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
....++.+.++++++.+. + ..+||+|||++|..++..||... + +.-+++.+..-
T Consensus 84 ~~~~~l~~~la~~~~~~~~~---------~v~~~~g~~~a~~~~~~~a~~~~-------~---------~~~vi~~~p~y 138 (426)
T 1sff_A 84 EPYLELCEIMNQKVPGDFAK---------KTLLVTTGSEAVENAVKIARAAT-------K---------RSGTIAFSGAY 138 (426)
T ss_dssp HHHHHHHHHHHHHSSCSSCE---------EEEEESSHHHHHHHHHHHHHHHH-------T---------CCEEEEETTCC
T ss_pred HHHHHHHHHHHHhCCccccc---------EEEEeCchHHHHHHHHHHHHHhh-------C---------CCeEEEECCCc
Confidence 344556777888883221 2 48999999999999999876531 1 22356666777
Q ss_pred cchHHHHHHhcCCc-------------eEEeeCCC-----CCCcCHHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGVT-------------IRGLPADD-----SYKLRGDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa~~lg~~-------------v~~Vp~d~-----~~~md~~~L~~~i~~ 286 (297)
|.+...++.+.|.. ++.||++. .+.+|+++|+++|++
T Consensus 139 ~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~ 193 (426)
T 1sff_A 139 HGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN 193 (426)
T ss_dssp CCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred CCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHh
Confidence 87887788877653 78888864 346899999999974
No 154
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=97.00 E-value=0.00082 Score=64.16 Aligned_cols=99 Identities=11% Similarity=-0.019 Sum_probs=63.1
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|..++...++|..+.+|+++++|.+.+.. ...-++|| |+.+|+.++.+. +. +.-.
T Consensus 82 y~~~~~~~~le~~~~~~~a~~~g~~~~~~-----~~~V~~~s-Gs~an~~~~~al----l~---------------pGD~ 136 (483)
T 1rv3_A 82 YGGTEHIDELETLCQKRALQAYGLDPQCW-----GVNVQPYS-GSPANFAVYTAL----VE---------------PHGR 136 (483)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCTTTE-----EEECCCSS-HHHHHHHHHHHH----TC---------------TTCE
T ss_pred cCcchhHHHHHHHHHHHHHHHhCCCcccC-----ceEEEECC-cHHHHHHHHHHh----cC---------------CCCE
Confidence 34455678899999999999999974200 00134455 558887766653 11 1124
Q ss_pred EEecCCCcchHHH--------HHHhcCCceEEe--eCC-CCCCcCHHHHHHHHHH
Q psy1678 243 GYCSDQAHSSVER--------AGLLGGVTIRGL--PAD-DSYKLRGDALEAAIEE 286 (297)
Q Consensus 243 i~~s~~aH~Si~K--------aa~~lg~~v~~V--p~d-~~~~md~~~L~~~i~~ 286 (297)
|++++..|.+... ++.+.|..++.| ++| ++|.+|+++|+++|.+
T Consensus 137 Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~ 191 (483)
T 1rv3_A 137 IMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARL 191 (483)
T ss_dssp EEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHH
T ss_pred EEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhh
Confidence 6667777766543 334445334444 457 6799999999999974
No 155
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=96.98 E-value=0.0021 Score=59.73 Aligned_cols=98 Identities=19% Similarity=0.076 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+|+++.++.+.+ .-+||+||||+|..|+++++.....+ |. ..+..+|+....-
T Consensus 71 ~~~~~~l~~~la~~~~~~~~---------~v~~~~gg~ea~~~al~~~~~~~~~~----g~------~~~~~vi~~~~~y 131 (430)
T 3i4j_A 71 SDVLEEYAGRLARFVGLPTF---------RFWAVSGGSEATESAVKLARQYHVER----GE------PGRFKVITRVPSY 131 (430)
T ss_dssp EHHHHHHHHHHHHHTTCTTC---------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCCEEEEETTC-
T ss_pred CHHHHHHHHHHHHhCCCCCC---------EEEEeCcHHHHHHHHHHHHHHHHHhc----CC------CCCcEEEEEeCCc
Confidence 34555677899999987543 58999999999999999998754321 10 0123344444444
Q ss_pred cchHHHHHHhcCC--------------ceEEeeCCCC---CCcCHHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGV--------------TIRGLPADDS---YKLRGDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa~~lg~--------------~v~~Vp~d~~---~~md~~~L~~~i~~ 286 (297)
|.+..-+..+.+. ++..+|.+.. +..|+++|+++|++
T Consensus 132 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 185 (430)
T 3i4j_A 132 HGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLER 185 (430)
T ss_dssp ------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHH
T ss_pred CCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHh
Confidence 4443333333222 5566776654 45788999999975
No 156
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=96.98 E-value=0.0046 Score=56.67 Aligned_cols=70 Identities=16% Similarity=-0.047 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH 250 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH 250 (297)
....++.+++++++|.+ ..+||+|||+||..++.+++.....+ +. ..++-+|+.+..-|
T Consensus 81 ~~~~~l~~~la~~~~~~-----------~v~~~~gg~~a~~~al~~~~~~~~~~----~~------~g~~~vi~~~~~y~ 139 (406)
T 4adb_A 81 EPVLRLAKKLIDATFAD-----------RVFFCNSGAEANEAALKLARKFAHDR----YG------SHKSGIVAFKNAFH 139 (406)
T ss_dssp HHHHHHHHHHHHHSSCS-----------EEEEESSHHHHHHHHHHHHHHHHHHH----TC------TTCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhhCCCC-----------eEEEeCcHHHHHHHHHHHHHHHHHhc----CC------CCCcEEEEECCCcC
Confidence 34456778999999865 38999999999999999987753322 10 01234566666667
Q ss_pred chHHHHHHhcC
Q psy1678 251 SSVERAGLLGG 261 (297)
Q Consensus 251 ~Si~Kaa~~lg 261 (297)
.+...+..+.|
T Consensus 140 ~~~~~~~~~~~ 150 (406)
T 4adb_A 140 GRTLFTVSAGG 150 (406)
T ss_dssp CSSHHHHHHSS
T ss_pred CCcHHHhhccC
Confidence 66555554433
No 157
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=96.96 E-value=0.0057 Score=56.04 Aligned_cols=89 Identities=12% Similarity=0.012 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+++++++|. + ..+||+|||++|..++.+++..... +.. .+.-+|+.+..-
T Consensus 81 ~~~~~~l~~~la~~~g~-~----------~v~~~~gg~~a~~~al~~~~~~~~~--~~~---------~~~~vi~~~~~y 138 (397)
T 2ord_A 81 NRPQMELAELLSKNTFG-G----------KVFFANTGTEANEAAIKIARKYGKK--KSE---------KKYRILSAHNSF 138 (397)
T ss_dssp EHHHHHHHHHHHHTTTS-C----------EEEEESSHHHHHHHHHHHHHHHHHH--HCT---------TCCEEEEEBTCC
T ss_pred CHHHHHHHHHHHHhcCC-C----------eEEEeCCHHHHHHHHHHHHHHHhhc--CCC---------CCceEEEEcCCc
Confidence 34555677788888883 2 4899999999999999988754211 000 122355566677
Q ss_pred cchHHHHHHhcCCc------------eEEeeCCCCCCcCHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGVT------------IRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 250 H~Si~Kaa~~lg~~------------v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
|.+...++.+.|.. ++.+|.+ |+++|+++|+
T Consensus 139 h~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~ 181 (397)
T 2ord_A 139 HGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMS 181 (397)
T ss_dssp CCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCC
T ss_pred CCCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhh
Confidence 88888888888775 7777764 7888887775
No 158
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=96.00 E-value=0.00013 Score=67.24 Aligned_cols=92 Identities=15% Similarity=0.117 Sum_probs=71.5
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
...++..+.+|+.+.+|++.+. ..-++|+|||+++..++.+..+. .-.|++...
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~-------~~v~~~~g~~~a~~~~~~~~~~~-------------------gd~vl~~~p 121 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDK-------EDIVFVEGVVPAISIAIQAFTKE-------------------GEAVLINSP 121 (392)
Confidence 6678888999999988854211 25889999999999888876321 113567788
Q ss_pred CcchHHHHHHhcCCceEEeeCC-C--CCCcCHHHHHHHHHH
Q psy1678 249 AHSSVERAGLLGGVTIRGLPAD-D--SYKLRGDALEAAIEE 286 (297)
Q Consensus 249 aH~Si~Kaa~~lg~~v~~Vp~d-~--~~~md~~~L~~~i~~ 286 (297)
+|.+...++...|.+++.+|.+ + ++++|+++|+++|++
T Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~ 162 (392)
T 3b1d_A 122 VYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE 162 (392)
Confidence 9999999999999999999985 3 356999999999873
No 159
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=96.94 E-value=0.011 Score=54.94 Aligned_cols=93 Identities=14% Similarity=-0.072 Sum_probs=60.4
Q ss_pred HHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchH
Q psy1678 174 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSV 253 (297)
Q Consensus 174 ~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si 253 (297)
.++.+.+++++|.+.+ ..+||+|||+||..|+.+++.....+ |. .++-+|+....-|.+.
T Consensus 89 ~~l~~~la~~~~~~~~---------~v~~~~ggtea~~~ai~~~~~~~~~~----g~-------~~~~vi~~~~~yh~~~ 148 (429)
T 1s0a_A 89 IELCRKLVAMTPQPLE---------CVFLADSGSVAVEVAMKMALQYWQAK----GE-------ARQRFLTFRNGYHGDT 148 (429)
T ss_dssp HHHHHHHHHHSCTTCC---------EEEEESSHHHHHHHHHHHHHHHHHHH----TC-------CCCEEEEETTCCCCSS
T ss_pred HHHHHHHHHhCCCCCC---------EEEEeCCHHHHHHHHHHHHHHHhccc----CC-------CCCeEEEECCCCCCCc
Confidence 3455678888886543 58999999999999999887532111 10 1223444444667666
Q ss_pred HHHHHhcC-------------CceEEeeCCC------CCCcCHHHHHHHHHH
Q psy1678 254 ERAGLLGG-------------VTIRGLPADD------SYKLRGDALEAAIEE 286 (297)
Q Consensus 254 ~Kaa~~lg-------------~~v~~Vp~d~------~~~md~~~L~~~i~~ 286 (297)
.-++.+.| .+++.||++. .+.+|+++|+++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 200 (429)
T 1s0a_A 149 FGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAA 200 (429)
T ss_dssp HHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHH
T ss_pred hhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHh
Confidence 55554433 1466777652 347999999999975
No 160
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=96.92 E-value=0.0025 Score=60.03 Aligned_cols=83 Identities=10% Similarity=0.112 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEE---cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI---QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~---tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
...+| +.+++++|.+. .++ +++||+||..++.+. +. +.-.|++
T Consensus 75 ~~~Le----~~lA~l~g~e~-----------alv~p~~~sGt~Ai~~al~al----l~---------------pGD~Vl~ 120 (427)
T 3i16_A 75 RDSLD----AVYARVFNTES-----------ALVRPHFVNGTHALGAALFGN----LR---------------PGNTMLS 120 (427)
T ss_dssp HHHHH----HHHHHHHTCSE-----------EEEETTCCSHHHHHHHHHHHH----CC---------------TTCEEEE
T ss_pred HHHHH----HHHHHHhCCcc-----------eEEeCCCccHHHHHHHHHHHH----hC---------------CCCEEEE
Confidence 34555 46889999864 356 899999998877653 11 1124556
Q ss_pred cC-CCcchHH-----------HHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 246 SD-QAHSSVE-----------RAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 246 s~-~aH~Si~-----------Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
+. ..|.... +++...|++++.||++++|++|+++|+++|+
T Consensus 121 ~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~ 172 (427)
T 3i16_A 121 VCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLK 172 (427)
T ss_dssp SSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHH
T ss_pred eCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhh
Confidence 66 6676655 4455679999999999999999999999997
No 161
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=96.89 E-value=0.0056 Score=57.00 Aligned_cols=92 Identities=12% Similarity=-0.074 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHHHHcCCCc-cccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC
Q psy1678 169 CTELEVVMLDWLGKMLDLPK-EFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD 247 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~-~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 247 (297)
......++.++++++++... + ..+||+|||++|..|+.++|... + +.-+|++..
T Consensus 84 ~~~~~~~l~~~la~~~~~~~~~---------~v~~~~ggsea~~~al~~~~~~~-------~---------~~~vi~~~~ 138 (439)
T 3dxv_A 84 SNAPAVTLAERLLASFPGEGTH---------KIWFGHSGSDANEAAYRAIVKAT-------G---------RSGVIAFAG 138 (439)
T ss_dssp EEHHHHHHHHHHHHTTTCTTTE---------EEEEESSHHHHHHHHHHHHHHHH-------S---------CCEEEEETT
T ss_pred CCHHHHHHHHHHHHhCCCCCCC---------EEEEeCCHHHHHHHHHHHHHHHh-------C---------CCEEEEECC
Confidence 44566678889999985432 2 48999999999999999987532 1 233566677
Q ss_pred CCcchHHHHHHhcCCc--------------eEEeeCCCCCCc-----CHHHHHHHHH
Q psy1678 248 QAHSSVERAGLLGGVT--------------IRGLPADDSYKL-----RGDALEAAIE 285 (297)
Q Consensus 248 ~aH~Si~Kaa~~lg~~--------------v~~Vp~d~~~~m-----d~~~L~~~i~ 285 (297)
.-|.+..-+..+.|.. +..+|.+..+.- |+++|+++|+
T Consensus 139 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 195 (439)
T 3dxv_A 139 AYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLA 195 (439)
T ss_dssp CCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHH
T ss_pred CCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHH
Confidence 7788877777665532 345665543333 7999999985
No 162
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=96.87 E-value=0.0031 Score=60.96 Aligned_cols=120 Identities=8% Similarity=0.026 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHhccccccccccCchhhHHHHHHHHHHHHHcC--CCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHH
Q psy1678 144 YPAIVADILSDSIACIGFTWIASPACTELEVVMLDWLGKMLD--LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT 221 (297)
Q Consensus 144 ~~svl~d~l~~~lN~n~~~~~~~p~~~~iE~~v~~~l~~llg--~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~ 221 (297)
++.++..+...+...+ .+........+++.+.+++.+..| .+... ...-++|+|||+++.+++.+...+.
T Consensus 117 ~~~~v~a~~~~~~~~~--y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~------~~~i~~t~G~t~al~~~~~~l~~~~ 188 (533)
T 3f6t_A 117 RDKVVAEWVNGAVANN--YPVPDRCLVNTEKIINYFLQELSYKDANLAE------QTDLFPTEGGTAAIVYAFHSLAENH 188 (533)
T ss_dssp HHHHHHHHHHHHHTCS--CCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG------GEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHhCC--CCCCcccHHHHHHHHHHHHHHhcCCCCCCCC------cceEEEECCHHHHHHHHHHHhhhhh
Confidence 4566666665555321 112334567899999999977733 22110 0148999999999999887632211
Q ss_pred HHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCC----CCCCcCHHHHHHHHH
Q psy1678 222 MQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPAD----DSYKLRGDALEAAIE 285 (297)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d----~~~~md~~~L~~~i~ 285 (297)
+- .+.-.|+++.-+|.+...++...|.+++.||++ .++.+|+++|+++++
T Consensus 189 l~--------------~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~ 242 (533)
T 3f6t_A 189 LL--------------KKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD 242 (533)
T ss_dssp SS--------------CTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC
T ss_pred cc--------------CCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC
Confidence 10 122367788999999999999999999999985 468999999998874
No 163
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=96.86 E-value=0.0078 Score=55.02 Aligned_cols=86 Identities=16% Similarity=-0.001 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+++++++|.+.+ ..++|+|||++|..++.+++... .+.-+|+.+..-
T Consensus 86 ~~~~~~l~~~la~~~~~~~~---------~v~~~~gg~~a~~~al~~~~~~~----------------~~~~vi~~~~~y 140 (395)
T 1vef_A 86 TPMRGEFYRTLTAILPPELN---------RVFPVNSGTEANEAALKFARAHT----------------GRKKFVAAMRGF 140 (395)
T ss_dssp CHHHHHHHHHHHHTSCTTEE---------EEEEESSHHHHHHHHHHHHHHHH----------------SCCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhcCCCcC---------EEEEcCcHHHHHHHHHHHHHHHh----------------CCCeEEEEcCCc
Confidence 34555677889999987543 48999999999999998876421 012345555556
Q ss_pred cchHHHHHHhcCCc------------eEEeeCCCCCCcCHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGVT------------IRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 250 H~Si~Kaa~~lg~~------------v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
|.+...++.+.|.. +..+|. .|+++|+++|+
T Consensus 141 ~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~ 183 (395)
T 1vef_A 141 SGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVD 183 (395)
T ss_dssp CCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCC
T ss_pred CCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhc
Confidence 77777777777764 333332 47888877775
No 164
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=96.85 E-value=0.0016 Score=59.85 Aligned_cols=90 Identities=14% Similarity=0.088 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
...+|..+.+++++++|.+.. -+++++||++|..++.+... +.-.|+++..
T Consensus 74 ~~~~~~~~~~~la~~~~~~~~----------~v~~~sGs~a~~~a~~~~~~-------------------~gd~v~~~~~ 124 (420)
T 3gbx_A 74 VDVVEQLAIDRAKELFGADYA----------NVQPHSGSQANFAVYTALLQ-------------------PGDTVLGMNL 124 (420)
T ss_dssp CHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCC-------------------TTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCc----------eeEecCcHHHHHHHHHHhcC-------------------CCCEEEecch
Confidence 356787788999999999653 34455669999988866411 1124666778
Q ss_pred CcchHHH---HHHhcCC--ceEEeeCCCCCCcCHHHHHHHHHHH
Q psy1678 249 AHSSVER---AGLLGGV--TIRGLPADDSYKLRGDALEAAIEED 287 (297)
Q Consensus 249 aH~Si~K---aa~~lg~--~v~~Vp~d~~~~md~~~L~~~i~~~ 287 (297)
.|.+... .....|. ..+.+++|+++.+|+++|+++|++.
T Consensus 125 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 168 (420)
T 3gbx_A 125 AQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH 168 (420)
T ss_dssp C------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH
T ss_pred hhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc
Confidence 8877442 2223343 4556677888999999999999864
No 165
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=96.83 E-value=0.0012 Score=60.81 Aligned_cols=119 Identities=10% Similarity=0.052 Sum_probs=73.5
Q ss_pred cccCCCCC-CHHHHHHHHHHHhcc--ccc-cccc---cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEE-cCCh
Q psy1678 135 HAYFPTAN-SYPAIVADILSDSIA--CIG-FTWI---ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGTA 206 (297)
Q Consensus 135 ~g~~~s~~-~~~svl~d~l~~~lN--~n~-~~~~---~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~-tsGG 206 (297)
+.+.++++ .++.|+..+...+.+ .|+ ..++ .++-+..+=.++.+.+++++|.++.. .-+| |+||
T Consensus 7 ~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~--------~v~f~t~~~ 78 (361)
T 3m5u_A 7 INFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDY--------EVLFLQGGA 78 (361)
T ss_dssp EECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTE--------EEEEESSHH
T ss_pred EeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCc--------eEEEEcCcH
Confidence 33444443 455655544443332 222 2221 24445555557899999999997431 4777 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCC--cCHHH
Q psy1678 207 SEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYK--LRGDA 279 (297)
Q Consensus 207 T~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~--md~~~ 279 (297)
|+++-.++...- + + ..-.+++++..+|.++..+.+ .|++|+.|++|.++. .+++.
T Consensus 79 T~a~n~~~~~~~----~-----~--------~~~~~i~~~~~~~~~~~~a~~-~G~~v~~~~~~~~g~~~~~~~~ 135 (361)
T 3m5u_A 79 SLQFAMIPMNLA----L-----N--------GVCEYANTGVWTKKAIKEAQI-LGVNVKTVASSEESNFDHIPRV 135 (361)
T ss_dssp HHHHHHHHHHHC----C-----S--------SCEEEEECSHHHHHHHHHHHH-TTCCEEEEEECTTTTSCSCCCC
T ss_pred HHHHHHHHHhcC----C-----C--------CeEEEEeCCHHHHHHHHHHHH-cCCceEEEecccCcCCCcCChh
Confidence 999988777531 1 1 122357777777766655444 589999999998875 56655
No 166
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=96.78 E-value=0.0045 Score=57.48 Aligned_cols=79 Identities=18% Similarity=0.134 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
.-.++.+++++++|.+ ..+||+|||+||..++.+.. . +.-.|+++...|.
T Consensus 57 ~~~~l~~~la~~~g~~-----------~~~~~~~gt~a~~~al~~l~----~---------------~gd~vi~~~~~~~ 106 (412)
T 2cb1_A 57 TAKALEERLKALEGAL-----------EAVVLASGQAATFAALLALL----R---------------PGDEVVAAKGLFG 106 (412)
T ss_dssp HHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHTTC----C---------------TTCEEEEETTCCH
T ss_pred HHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHh----C---------------CCCEEEEeCCCch
Confidence 3445667888999875 28899999999999988751 1 1125677889999
Q ss_pred hHHHHH----HhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 252 SVERAG----LLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 252 Si~Kaa----~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+..... ...|++++.+|+| +++|+++|++
T Consensus 107 ~~~~~~~~~~~~~g~~~~~~~~~------~~~l~~~i~~ 139 (412)
T 2cb1_A 107 QTIGLFGQVLSLMGVTVRYVDPE------PEAVREALSA 139 (412)
T ss_dssp HHHHHHHHTTTTTTCEEEEECSS------HHHHHHHCCT
T ss_pred hHHHHHHHHHHHcCCEEEEECCC------HHHHHHHhcc
Confidence 877764 4468888888875 7788777753
No 167
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=96.77 E-value=0.011 Score=54.85 Aligned_cols=88 Identities=10% Similarity=0.003 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHcCCC-ccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 173 EVVMLDWLGKMLDLP-KEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 173 E~~v~~~l~~llg~~-~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
..++.+.+++.+|.+ .+ .-+||+||||+|..|+.+++... ++-+|+....-|.
T Consensus 88 ~~~l~~~la~~~~~~~~~---------~v~~~~gg~ea~~~ai~~~~~~~-----------------~~~vi~~~p~yh~ 141 (419)
T 2eo5_A 88 QLELAKKLVTYSPGNFQK---------KVFFSNSGTEAIEASIKVVKNTG-----------------RKYIIAFLGGFHG 141 (419)
T ss_dssp HHHHHHHHHHHSSCSSCE---------EEEEESSHHHHHHHHHHHHHTTS-----------------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHhCCCCcCC---------EEEEeCchHHHHHHHHHHHHHhh-----------------CCcEEEECCCcCC
Confidence 345667889999885 32 48999999999999999886421 1234555556676
Q ss_pred hHHHHHHhcC-------------CceEEeeCCCCCC----------------cCHHHHH-HHHHH
Q psy1678 252 SVERAGLLGG-------------VTIRGLPADDSYK----------------LRGDALE-AAIEE 286 (297)
Q Consensus 252 Si~Kaa~~lg-------------~~v~~Vp~d~~~~----------------md~~~L~-~~i~~ 286 (297)
+..-++.+.| .+++.||.+++++ +|+++|+ ++|++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~ 206 (419)
T 2eo5_A 142 RTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVN 206 (419)
T ss_dssp SSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHH
T ss_pred CCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhh
Confidence 6666654432 2688899876654 4788999 88874
No 168
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=96.75 E-value=0.0048 Score=57.31 Aligned_cols=98 Identities=10% Similarity=0.013 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHH-HHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATL-VALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD 247 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl-~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 247 (297)
...+.+. +++.+|.+++ .-++|+|++++++ ..+..+-. ... ..|.... .....-.|++.+
T Consensus 78 ~~~lr~~----ia~~~~~~~~---------~i~~t~G~~~al~l~~~~~~l~---~~~-~~g~~~~--~~~d~~~Vl~~~ 138 (422)
T 3d6k_A 78 IADIREL----WAEALGLPAD---------LVVAQDGSSLNIMFDLISWSYT---WGN-NDSSRPW--SAEEKVKWLCPV 138 (422)
T ss_dssp CHHHHHH----HHHHHTCCGG---------GEEECSSCHHHHHHHHHHHHHH---HCC-TTCSSCG--GGSSCCEEEEEE
T ss_pred CHHHHHH----HHHHhCCChh---------HEEEecchHHHHHHHHHHHHhc---Ccc-ccccccc--ccCCCCEEEEeC
Confidence 4445544 4444577654 5889999999974 33322211 100 0000000 000012466778
Q ss_pred CCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 248 QAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 248 ~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
-+|.....++...|.+++.||+|++| +|+++|++++++
T Consensus 139 p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~ 176 (422)
T 3d6k_A 139 PGYDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKD 176 (422)
T ss_dssp SCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTS
T ss_pred CccHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhc
Confidence 89999999999999999999998876 999999998853
No 169
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=96.74 E-value=0.0035 Score=58.65 Aligned_cols=79 Identities=8% Similarity=0.026 Sum_probs=58.5
Q ss_pred HHHHHHcCCCccccccCCCCCCeEE---cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC-CCcchH
Q psy1678 178 DWLGKMLDLPKEFLACSGGKGGGVI---QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD-QAHSSV 253 (297)
Q Consensus 178 ~~l~~llg~~~~~~~~~~~~~~G~~---tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~-~aH~Si 253 (297)
+.+++++|.+. .++ |++||+||..++.+. +. +.-.|+++. ..|...
T Consensus 66 ~~lA~l~g~e~-----------alv~p~~~sGt~Ai~~al~al----l~---------------~GD~Vl~~~~~~y~~~ 115 (409)
T 3jzl_A 66 RVYATVFKTEA-----------ALVRPQIISGTHAISTVLFGI----LR---------------PDDELLYITGQPYDTL 115 (409)
T ss_dssp HHHHHHHTCSE-----------EEEETTSCSHHHHHHHHHHHH----CC---------------TTCEEEECSSSCCTTH
T ss_pred HHHHHHhCCCc-----------EEEECCCccHHHHHHHHHHHh----cC---------------CCCEEEEeCCCCcHhH
Confidence 36788888864 455 899999998887753 11 112455665 777777
Q ss_pred HH----------HHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 254 ER----------AGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 254 ~K----------aa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.. .+...|+.++.||++++|.+|+++|+++|++
T Consensus 116 ~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~ 158 (409)
T 3jzl_A 116 EEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTP 158 (409)
T ss_dssp HHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCT
T ss_pred HHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccC
Confidence 64 3455688999999999999999999998864
No 170
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=96.73 E-value=0.007 Score=54.65 Aligned_cols=73 Identities=8% Similarity=0.038 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.+.+ .-+||+|||+++..++.+..+ +.-.|+++..+|.++.
T Consensus 69 ~lr~~la~~~g~~~~---------~i~~t~g~~~al~~~~~~l~~-------------------~gd~Vl~~~p~~~~~~ 120 (360)
T 3hdo_A 69 KLREVAGELYGFDPS---------WIIMANGSDEVLNNLIRAFAA-------------------EGEEIGYVHPSYSYYG 120 (360)
T ss_dssp HHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHCC-------------------TTCEEEEESSSCTHHH
T ss_pred HHHHHHHHHhCcCcc---------eEEEcCCHHHHHHHHHHHHhC-------------------CCCEEEEcCCChHHHH
Confidence 455677778887653 589999999999998876411 1124667889999999
Q ss_pred HHHHhcCCceEEeeCCCCCCc
Q psy1678 255 RAGLLGGVTIRGLPADDSYKL 275 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~d~~~~m 275 (297)
.++...|.+++.||+++++.+
T Consensus 121 ~~~~~~g~~~~~v~~~~~~~~ 141 (360)
T 3hdo_A 121 TLAEVQGARVRTFGLTGDFRI 141 (360)
T ss_dssp HHHHHHTCEEEEECBCTTSSB
T ss_pred HHHHHCCCEEEEeeCCCCCCH
Confidence 999999999999998877665
No 171
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=96.72 E-value=0.00054 Score=63.61 Aligned_cols=125 Identities=12% Similarity=0.069 Sum_probs=77.1
Q ss_pred cccCCCCCCHHHHHHHHHHHhccc--cc-cc---cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEE-cCChh
Q psy1678 135 HAYFPTANSYPAIVADILSDSIAC--IG-FT---WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGTAS 207 (297)
Q Consensus 135 ~g~~~s~~~~~svl~d~l~~~lN~--n~-~~---~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~-tsGGT 207 (297)
++..++.+.+..|+..+...+.|. |+ .. ...++-+..+=.++.+.+++++|.++.. .-+| |+|||
T Consensus 16 ~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~--------evif~t~~~T 87 (377)
T 3e77_A 16 ENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNY--------KVIFLQGGGC 87 (377)
T ss_dssp CCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTE--------EEEEESSHHH
T ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCC--------eEEEEcCchH
Confidence 444455566777766555544322 22 21 2234556666667999999999997531 4788 58999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHh---cCCceEEeeCCCCCCcCHHHHHHHH
Q psy1678 208 EATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLL---GGVTIRGLPADDSYKLRGDALEAAI 284 (297)
Q Consensus 208 ~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~---lg~~v~~Vp~d~~~~md~~~L~~~i 284 (297)
+++-.++...-. ++ ..+ .+....+.|++- +.+.+ .|+.++.+|+|.++..+++.++.+|
T Consensus 88 ~a~n~a~~~l~~---~~-------------~Gd-~v~~~~~g~~~~-~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i 149 (377)
T 3e77_A 88 GQFSAVPLNLIG---LK-------------AGR-CADYVVTGAWSA-KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNL 149 (377)
T ss_dssp HHHHHHHHHHGG---GS-------------TTC-EEEECCCSHHHH-HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCC
T ss_pred HHHHHHHHhccC---CC-------------CCC-eEEEEECCHHHH-HHHHHHHHhCCceEEeccCCCcCCCCChHHhcc
Confidence 999888775311 00 011 233455677764 44444 4767777899877788888776555
Q ss_pred H
Q psy1678 285 E 285 (297)
Q Consensus 285 ~ 285 (297)
+
T Consensus 150 ~ 150 (377)
T 3e77_A 150 N 150 (377)
T ss_dssp C
T ss_pred C
Confidence 4
No 172
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=96.71 E-value=0.0073 Score=55.47 Aligned_cols=82 Identities=13% Similarity=-0.031 Sum_probs=55.1
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEE-cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVG 243 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~-tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i 243 (297)
.+|....+..++.+++++++|.+.. ...+| |+|||++|..++.+.. .++ ++
T Consensus 72 ~~~~~~~~~~~~~~~la~~~g~~~~--------~~i~~~t~g~t~al~~~~~~l~-------------------~~g-v~ 123 (398)
T 2fyf_A 72 RQAPVKNLVGRVRSGLAELFSLPDG--------YEVILGNGGATAFWDAAAFGLI-------------------DKR-SL 123 (398)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTCCTT--------CEEEEEETCHHHHHHHHHHHTC-------------------SSC-EE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEeCCchhHHHHHHHHHhc-------------------CCC-eE
Confidence 3566666777899999999999732 14788 9999999998887741 012 23
Q ss_pred EecCCCcch-HHHHHHhc--CCceEEeeCCCCCCc
Q psy1678 244 YCSDQAHSS-VERAGLLG--GVTIRGLPADDSYKL 275 (297)
Q Consensus 244 ~~s~~aH~S-i~Kaa~~l--g~~v~~Vp~d~~~~m 275 (297)
+++...|.. ..+.+... |..++.||++ +|.+
T Consensus 124 ~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~g~~ 157 (398)
T 2fyf_A 124 HLTYGEFSAKFASAVSKNPFVGEPIIITSD-PGSA 157 (398)
T ss_dssp EEECSHHHHHHHHHHHHCTTSCCCEEEECC-TTCC
T ss_pred EEeCCHHHHHHHHHHHHhCCCCceEEEecC-CCCC
Confidence 335455532 23345555 7889999998 4443
No 173
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=96.68 E-value=0.0056 Score=56.26 Aligned_cols=89 Identities=12% Similarity=0.161 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
..+|....+++++++|.+.. -++|+|||++|..++.+..+ +.-.|+++..+
T Consensus 77 ~~~~~~a~~~~~~~~~~~~~----------~v~~~~Gs~a~~~al~~~~~-------------------~gd~Vi~~~~~ 127 (425)
T 3ecd_A 77 DEVEALAIERVKRLFNAGHA----------NVQPHSGAQANGAVMLALAK-------------------PGDTVLGMSLD 127 (425)
T ss_dssp CHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCC-------------------TTCEEEEECC-
T ss_pred HHHHHHHHHHHHHHhCCCCc----------eeecCchHHHHHHHHHHccC-------------------CCCEEEEcccc
Confidence 45676666889999998752 45699999999988876511 11246677888
Q ss_pred cch-HHHHHH--hcCC--ceEEeeCC-CCCCcCHHHHHHHHHHH
Q psy1678 250 HSS-VERAGL--LGGV--TIRGLPAD-DSYKLRGDALEAAIEED 287 (297)
Q Consensus 250 H~S-i~Kaa~--~lg~--~v~~Vp~d-~~~~md~~~L~~~i~~~ 287 (297)
|.+ +..++. ..|. .++.++++ +++.+|+++|+++|.+.
T Consensus 128 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 171 (425)
T 3ecd_A 128 AGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQH 171 (425)
T ss_dssp -----------------CEEEEECCCTTTSSCCHHHHHHHHHHH
T ss_pred cccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhc
Confidence 988 333333 4455 44556666 45899999999999753
No 174
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=96.66 E-value=0.0079 Score=56.84 Aligned_cols=97 Identities=14% Similarity=-0.083 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH 250 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH 250 (297)
....++.++++++++.+.+ ..+||+|||+||..|++++|.....+ |. ..++.+|.....-|
T Consensus 118 ~~~~~L~e~la~~~~~~~~---------~v~~~~sGseA~~~Alk~a~~~~~~~----g~------~g~~~ii~~~~~yh 178 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLD---------TVFFSDSGSVSVEVAAKMALQYWRGR----GL------PGKRRLMTWRGGYH 178 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCCEEEEETTCCC
T ss_pred HHHHHHHHHHHHhCCCCcC---------EEEEeCcHHHHHHHHHHHHHHHHHhc----CC------CCCceEEEEcCCcC
Confidence 3445677889999976543 48999999999999999999864321 10 01223444444555
Q ss_pred chHHHHHHhc-------------CCceEEeeC--CCCCCcCHHHHHHHHHH
Q psy1678 251 SSVERAGLLG-------------GVTIRGLPA--DDSYKLRGDALEAAIEE 286 (297)
Q Consensus 251 ~Si~Kaa~~l-------------g~~v~~Vp~--d~~~~md~~~L~~~i~~ 286 (297)
-+..-+..+. ...+..+|. +..+..|+++|+++|++
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~ 229 (457)
T 3tfu_A 179 GDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQ 229 (457)
T ss_dssp CSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHH
T ss_pred CccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHh
Confidence 4443333331 113444444 33344689999999975
No 175
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=96.65 E-value=0.0033 Score=58.57 Aligned_cols=111 Identities=7% Similarity=-0.033 Sum_probs=65.5
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCC-CCCcCCCCce
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPD-WKDSDIIANL 241 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~-~~~~~~~~~~ 241 (297)
|........+++.+.+|+.+..|++-+. ..-+||+|||++|..++.+.... + ...+ +.+.+.....
T Consensus 79 y~~~~g~~~lr~~ia~~l~~~~g~~~~~-------~~i~~t~G~t~al~~~~~~l~~~-----g-d~~~~~~~~~~g~~~ 145 (444)
T 3if2_A 79 YSNPQGDSAFIDALVGFFNRHYDWNLTS-------ENIALTNGSQNAFFYLFNLFGGA-----F-VNEHSQDKESKSVDK 145 (444)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCG-------GGEEEESSHHHHHHHHHHHSSEE-----E-ECC-------CEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHhhcCCCCCH-------HHEEEecCcHHHHHHHHHHHhCC-----C-ccccccccccccccc
Confidence 4444456789999999999888865221 25899999999999988775211 0 0000 0000000001
Q ss_pred EEEec-CCCcchHHHHH------HhcCCceEEeeCCC-C----CCcCHHHHHHHHHH
Q psy1678 242 VGYCS-DQAHSSVERAG------LLGGVTIRGLPADD-S----YKLRGDALEAAIEE 286 (297)
Q Consensus 242 ~i~~s-~~aH~Si~Kaa------~~lg~~v~~Vp~d~-~----~~md~~~L~~~i~~ 286 (297)
.++++ .-+|.+...++ .-.|..++.+|+|+ + +.+|+++|+++|++
T Consensus 146 ~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~ 202 (444)
T 3if2_A 146 SILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPAL 202 (444)
T ss_dssp EEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHH
T ss_pred eEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHh
Confidence 23443 44555554432 22456778888876 3 37999999988654
No 176
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=96.64 E-value=0.0071 Score=55.87 Aligned_cols=77 Identities=19% Similarity=-0.003 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+.+++++|.+. .++|+|||+||..++.+... +.-.|+++...|.+..
T Consensus 70 ~l~~~la~~~g~~~-----------~~~~~sGt~A~~~al~~~~~-------------------~gd~Vi~~~~~y~~~~ 119 (392)
T 3qhx_A 70 ALEAALAAVEDAAF-----------GRAFSSGMAAADCALRAMLR-------------------PGDHVVIPDDAYGGTF 119 (392)
T ss_dssp HHHHHHHHHTTCSE-----------EEEESSHHHHHHHHHHHHCC-------------------TTCEEEEETTCCHHHH
T ss_pred HHHHHHHHHhCCCc-----------EEEECCHHHHHHHHHHHHhC-------------------CCCEEEEeCCCcchHH
Confidence 34557788888753 88999999999999886511 1125778899998877
Q ss_pred HHH----HhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 RAG----LLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 Kaa----~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
..+ ...|++++.||++ |+++|+++|++
T Consensus 120 ~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~ 150 (392)
T 3qhx_A 120 RLIDKVFTGWNVEYTPVALA-----DLDAVRAAIRP 150 (392)
T ss_dssp HHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCT
T ss_pred HHHHHHHHhcCcEEEEeCCC-----CHHHHHHhhCC
Confidence 766 5578888888876 88888888763
No 177
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=96.64 E-value=0.0022 Score=57.55 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=56.9
Q ss_pred HHHHHHHHcC---CCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcch
Q psy1678 176 MLDWLGKMLD---LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSS 252 (297)
Q Consensus 176 v~~~l~~llg---~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~S 252 (297)
+.+.+++++| .+++ .-++|+|||+++..++.+. . + .|++. -+|.+
T Consensus 61 lr~~la~~~~~~~~~~~---------~v~~~~G~~~al~~~~~~~-----g----------------d-~Vl~~-p~y~~ 108 (335)
T 1uu1_A 61 LIEKILSYLDTDFLSKN---------NVSVGNGADEIIYVMMLMF-----D----------------R-SVFFP-PTYSC 108 (335)
T ss_dssp HHHHHHHHHTCSSCCGG---------GEEEESSHHHHHHHHHHHS-----S----------------E-EEECS-SSCHH
T ss_pred HHHHHHHHcCCCCCCHH---------HEEEcCChHHHHHHHHHHh-----C----------------C-cEEEC-CCcHH
Confidence 4445666666 5543 5899999999998887764 1 1 46677 89999
Q ss_pred HHHHHHhcCCceEEeeCCCCCCcCHHHH
Q psy1678 253 VERAGLLGGVTIRGLPADDSYKLRGDAL 280 (297)
Q Consensus 253 i~Kaa~~lg~~v~~Vp~d~~~~md~~~L 280 (297)
...++...|.+++.||+++++.+|+++|
T Consensus 109 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l 136 (335)
T 1uu1_A 109 YRIFAKAVGAKFLEVPLTKDLRIPEVNV 136 (335)
T ss_dssp HHHHHHHHTCEEEECCCCTTSCCCCCCC
T ss_pred HHHHHHHcCCeEEEeccCCCCCCCHHHc
Confidence 9999999999999999988888888776
No 178
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=96.60 E-value=0.0089 Score=55.85 Aligned_cols=77 Identities=16% Similarity=0.011 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.++++++.|.+ ..++|+||++++..++.+... +.-.|+++..+|.+..
T Consensus 85 ~l~~~la~~~g~~-----------~~~~~~sG~~Ai~~al~~l~~-------------------~Gd~Vi~~~~~y~~~~ 134 (414)
T 3ndn_A 85 VFEERLRLIEGAP-----------AAFATASGMAAVFTSLGALLG-------------------AGDRLVAARSLFGSCF 134 (414)
T ss_dssp HHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHTTCC-------------------TTCEEEEESCCCHHHH
T ss_pred HHHHHHHHHHCCC-----------cEEEECCHHHHHHHHHHHHhC-------------------CCCEEEEcCCccchHH
Confidence 3446788888864 378999999999888766411 1125677888999887
Q ss_pred HHHHh----cCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 RAGLL----GGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 Kaa~~----lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.++.. +|++++.||.+ |+++|+++|++
T Consensus 135 ~~~~~~~~~~g~~~~~v~~~-----d~~~l~~ai~~ 165 (414)
T 3ndn_A 135 VVCSEILPRWGVQTVFVDGD-----DLSQWERALSV 165 (414)
T ss_dssp HHHHTHHHHTTCEEEEECTT-----CHHHHHHHTSS
T ss_pred HHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCC
Confidence 77754 89999999887 88988888753
No 179
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=96.59 E-value=0.0098 Score=55.93 Aligned_cols=83 Identities=19% Similarity=0.144 Sum_probs=61.4
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
..|....+| +++++++|.+. .+++++|++||..++.+. +. +.-.|+
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----------~v~~~sG~~Ai~~al~al----~~---------------~Gd~Vi 125 (430)
T 3ri6_A 80 SNPTVEDLE----QRLKNLTGALG-----------VLALGSGMAAISTAILTL----AR---------------AGDSVV 125 (430)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----------EEEESCHHHHHHHHHHHH----CC---------------TTCEEE
T ss_pred CCHHHHHHH----HHHHHHHCCCc-----------EEEECCHHHHHHHHHHHH----hC---------------CCCEEE
Confidence 345555555 47788888753 778888999999888765 11 122577
Q ss_pred ecCCCcchHHH----HHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 245 CSDQAHSSVER----AGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 245 ~s~~aH~Si~K----aa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
++...|.+... .+..+|++++.|+.+ |+++|+++|++
T Consensus 126 ~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-----d~~~l~~ai~~ 166 (430)
T 3ri6_A 126 TTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-----DSLAVEHACDE 166 (430)
T ss_dssp EETTCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHCCT
T ss_pred EcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhhCC
Confidence 88999988887 667789999999887 88888888753
No 180
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=96.59 E-value=0.0025 Score=60.03 Aligned_cols=87 Identities=11% Similarity=0.043 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC-CCcc
Q psy1678 173 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD-QAHS 251 (297)
Q Consensus 173 E~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~-~aH~ 251 (297)
..++.+++++++|.+... .-+++++||+||..++.+.. . ..+ .|+++. ..|.
T Consensus 67 ~~~l~~~la~~~g~~~~~--------~~i~~~sGt~Ai~~al~al~----~--------------~Gd-~Vl~~~~~~y~ 119 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL--------VRPQIISGTHAISTALFGIL----R--------------PGD-ELLYITGKPYD 119 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC--------CBTTSCSHHHHHHHHHHTTC----C--------------TTC-EEEECSSSCCT
T ss_pred HHHHHHHHHHHhCCCccc--------ccceeeCHHHHHHHHHHHhC----C--------------CCC-EEEEeCCCCch
Confidence 345667899999997531 12224578999988876531 0 112 455565 7899
Q ss_pred hHHHHHHh----------cCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 252 SVERAGLL----------GGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 252 Si~Kaa~~----------lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+...++.+ +|++++.||.+++|.+|+++|+++|++
T Consensus 120 ~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~ 164 (431)
T 3ht4_A 120 TLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHS 164 (431)
T ss_dssp THHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCT
T ss_pred hHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCC
Confidence 88877654 688999999999999999999998863
No 181
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=96.55 E-value=0.027 Score=52.53 Aligned_cols=97 Identities=18% Similarity=0.064 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH 250 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH 250 (297)
....++.+.++++++.+.+ .-+||+|||+||..|+.+++.....+ |. ..++-+|+.+..-|
T Consensus 93 ~~~~~l~~~la~~~~~~~~---------~v~~~~ggsea~~~al~~~~~~~~~~----g~------~~~~~vi~~~~~yh 153 (449)
T 3a8u_X 93 PLSFQLAEKITDLTPGNLN---------HVFFTDSGSECALTAVKMVRAYWRLK----GQ------ATKTKMIGRARGYH 153 (449)
T ss_dssp HHHHHHHHHHHTTSSTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCCEEEEETTCCC
T ss_pred HHHHHHHHHHHHhCCCCCC---------EEEEcCcHHHHHHHHHHHHHHHHHhc----CC------CCCCEEEEECCCcC
Confidence 3444566788888865443 48999999999999999998643211 10 01234555677778
Q ss_pred chHHHHHHhcCC------------ceEEeeCCCCC-----CcC--------HHHHHHHHHH
Q psy1678 251 SSVERAGLLGGV------------TIRGLPADDSY-----KLR--------GDALEAAIEE 286 (297)
Q Consensus 251 ~Si~Kaa~~lg~------------~v~~Vp~d~~~-----~md--------~~~L~~~i~~ 286 (297)
.+...+..+.|. +++.|+++..+ .+| +++|+++|++
T Consensus 154 g~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~ 214 (449)
T 3a8u_X 154 GVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIEL 214 (449)
T ss_dssp CSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHH
T ss_pred CCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHh
Confidence 777777766552 46777765422 257 9999999975
No 182
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=96.53 E-value=0.011 Score=53.36 Aligned_cols=88 Identities=13% Similarity=0.076 Sum_probs=57.7
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
+|....+-.++.+++++++|.+++. ..-++|+|||++|..++.+. +. ..+ .|++
T Consensus 44 ~~~~~~~~~~~~~~la~~~g~~~~~-------~~i~~t~g~t~a~~~~~~~l----~~--------------~gd-~vl~ 97 (362)
T 2c0r_A 44 GAVYEAVHNEAQARLLALLGNPTGY-------KVLFIQGGASTQFAMIPMNF----LK--------------EGQ-TANY 97 (362)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSSE-------EEEEESSHHHHHHHHHHHHH----CC--------------TTC-EEEE
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc-------EEEEECCCchHHHHHHHHhc----CC--------------CCC-eEEE
Confidence 4555556667999999999997521 02467899999999887763 11 012 2334
Q ss_pred cCCCcch--HHHHHHhcCCceEEeeCCC--CC--CcCHHHH
Q psy1678 246 SDQAHSS--VERAGLLGGVTIRGLPADD--SY--KLRGDAL 280 (297)
Q Consensus 246 s~~aH~S--i~Kaa~~lg~~v~~Vp~d~--~~--~md~~~L 280 (297)
....|++ +...+...| +++.||++. ++ ..|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~ 137 (362)
T 2c0r_A 98 VMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEI 137 (362)
T ss_dssp EECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGC
T ss_pred EecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHc
Confidence 4466776 346777789 999999872 22 3566554
No 183
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=96.50 E-value=0.012 Score=54.54 Aligned_cols=77 Identities=8% Similarity=-0.030 Sum_probs=57.7
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+.+++++|.++ .++++||++++..++.+. .. +.-.|+++...|.+..
T Consensus 66 ~l~~~ia~~~g~~~-----------~i~~~~g~~ai~~~~~~l----~~---------------~gd~Vl~~~~~y~~~~ 115 (404)
T 1e5e_A 66 NLEGKIAFLEKTEA-----------CVATSSGMGAIAATVLTI----LK---------------AGDHLISDECLYGCTH 115 (404)
T ss_dssp HHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHH----CC---------------TTCEEEEESCCCHHHH
T ss_pred HHHHHHHHHhCCCc-----------EEEeCChHHHHHHHHHHH----hC---------------CCCEEEEeCCCchhHH
Confidence 34557777778752 788899999998888764 11 1125677899999988
Q ss_pred H----HHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 R----AGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 K----aa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
. ++...|++++.||++ |+++|+++|++
T Consensus 116 ~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~ 146 (404)
T 1e5e_A 116 ALFEHALTKFGIQVDFINTA-----IPGEVKKHMKP 146 (404)
T ss_dssp HHHHTHHHHTTCEEEEECTT-----STTHHHHHCCT
T ss_pred HHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCC
Confidence 8 788889999999887 77888877753
No 184
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=96.47 E-value=0.00014 Score=67.72 Aligned_cols=94 Identities=10% Similarity=-0.006 Sum_probs=58.4
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEE-cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCc-eEE
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVI-QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIAN-LVG 243 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~-tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~-~~i 243 (297)
++.+..+=.++...+++++|.++.. .-+| |+|||+++.+++... +. .+ .+ +++
T Consensus 67 ~~~~~~~~~~ar~~la~ll~~~~~~--------evif~t~~~T~a~n~ai~~l----~~----~g---------d~v~~~ 121 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLNIPSNY--------KVLFCHGGGRGQFAGVPLNL----LG----DK---------TTADYV 121 (386)
T ss_dssp ------CCHHHHHHHHHHHTCCTTE--------EEEEEESCTTHHHHHHHHHH----CT----TC---------CEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc--------eEEEEcCCchHHHHHHHHhc----cC----CC---------CeEEEE
Confidence 3444444456889999999997521 3788 699999998887653 11 01 12 234
Q ss_pred EecCCCcchHHHHHHhcCCceEEeeCC--CCCC-cCHHHHHHHHHH
Q psy1678 244 YCSDQAHSSVERAGLLGGVTIRGLPAD--DSYK-LRGDALEAAIEE 286 (297)
Q Consensus 244 ~~s~~aH~Si~Kaa~~lg~~v~~Vp~d--~~~~-md~~~L~~~i~~ 286 (297)
.++..+|.++.. ++-.| .|+.||+| +.|. ++++.++++|++
T Consensus 122 ~~~~~~~~~~~~-a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~ 165 (386)
T 3qm2_A 122 DAGYWAASAIKE-AKKYC-APQIIDAKITVDGKRAVKPMREWQLSD 165 (386)
T ss_dssp ESSHHHHHHHHH-HTTTS-EEEEEECEEEETTEEEECCGGGCCCCT
T ss_pred eCCHHHHHHHHH-HHHhC-CeEEEecCcccCCCCCCchHHHhhcCC
Confidence 444444543333 33457 89999999 7786 888888776654
No 185
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=96.47 E-value=0.0067 Score=54.49 Aligned_cols=67 Identities=10% Similarity=0.048 Sum_probs=54.4
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.+++ .-++|+|||+++..++.+.. | + .|+++.-+|.++.
T Consensus 54 ~lr~~la~~~~~~~~---------~i~~t~g~~~al~~~~~~l~----------g----------d-~Vi~~~p~~~~~~ 103 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN---------AILVTNGPTAAFYQIAQAFR----------G----------S-RSLIAIPSFAEYE 103 (350)
T ss_dssp HHHHHHHHHTTCCGG---------GEEEESHHHHHHHHHHHHTT----------T----------C-EEEEEESCCHHHH
T ss_pred HHHHHHHHHhCcCHH---------HEEEcCCHHHHHHHHHHHHC----------C----------C-EEEEeCCCcHHHH
Confidence 466788999998754 58999999999988887643 1 1 4667788999999
Q ss_pred HHHHhcCCceEEeeC-CC
Q psy1678 255 RAGLLGGVTIRGLPA-DD 271 (297)
Q Consensus 255 Kaa~~lg~~v~~Vp~-d~ 271 (297)
.++...|.+++.||+ ++
T Consensus 104 ~~~~~~g~~~~~v~~~~~ 121 (350)
T 3fkd_A 104 DACRMYEHEVCFYPSNED 121 (350)
T ss_dssp HHHHHTTCEEEEEETTSC
T ss_pred HHHHHcCCeEEEEecCCc
Confidence 999999999999998 65
No 186
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=96.45 E-value=0.014 Score=53.66 Aligned_cols=77 Identities=14% Similarity=-0.006 Sum_probs=57.1
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+.+++++|.+. .+++++||+||..++.+... +.-.|+++...|.+..
T Consensus 69 ~l~~~la~~~g~~~-----------~i~~~sG~~a~~~~l~~~~~-------------------~gd~vl~~~~~~~~~~ 118 (398)
T 1gc0_A 69 LLEARMASLEGGEA-----------GLALASGMGAITSTLWTLLR-------------------PGDEVLLGNTLYGCTF 118 (398)
T ss_dssp HHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHCC-------------------TTCEEEEESSCCSHHH
T ss_pred HHHHHHHHHhCCCc-----------EEEECCHHHHHHHHHHHHhc-------------------CCCEEEEeCCCchhHH
Confidence 34557778888762 67788889999999887611 1125778899999988
Q ss_pred HHH----HhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 RAG----LLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 Kaa----~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.++ ...|+.++.++.+ |+++|+++|++
T Consensus 119 ~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~ 149 (398)
T 1gc0_A 119 AFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTP 149 (398)
T ss_dssp HHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCT
T ss_pred HHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCC
Confidence 876 5678888888874 78888888753
No 187
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=96.43 E-value=0.026 Score=52.56 Aligned_cols=76 Identities=14% Similarity=0.045 Sum_probs=56.5
Q ss_pred HHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHH
Q psy1678 176 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVER 255 (297)
Q Consensus 176 v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~K 255 (297)
+.+.+++++|.+. .+++++||+||..++.+.. . +.-.|+++..+|.+...
T Consensus 63 l~~~la~~~g~~~-----------~v~~~sGt~A~~~~l~~~~----~---------------~gd~vi~~~~~~~~~~~ 112 (421)
T 2ctz_A 63 LEKRLAALEGGKA-----------ALATASGHAAQFLALTTLA----Q---------------AGDNIVSTPNLYGGTFN 112 (421)
T ss_dssp HHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHC----C---------------TTCEEEECSCCCHHHHH
T ss_pred HHHHHHHHhCCCc-----------eEEecCHHHHHHHHHHHHh----C---------------CCCEEEEeCCCchHHHH
Confidence 4456777888753 5677778999999988751 1 12257789999999888
Q ss_pred HH----HhcCCceEEe-eCCCCCCcCHHHHHHHHHH
Q psy1678 256 AG----LLGGVTIRGL-PADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 256 aa----~~lg~~v~~V-p~d~~~~md~~~L~~~i~~ 286 (297)
++ ...|++++.+ +++ |+++|+++|++
T Consensus 113 ~~~~~~~~~g~~~~~~~~~~-----d~~~l~~~i~~ 143 (421)
T 2ctz_A 113 QFKVTLKRLGIEVRFTSREE-----RPEEFLALTDE 143 (421)
T ss_dssp HHHTHHHHTTCEEEECCTTC-----CHHHHHHHCCT
T ss_pred HHHHHHHHcCCEEEEECCCC-----CHHHHHHhhcc
Confidence 76 6789999888 765 78998888754
No 188
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=96.36 E-value=0.025 Score=51.66 Aligned_cols=41 Identities=17% Similarity=0.062 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHH
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT 221 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~ 221 (297)
.....++.+|+++++|. + ..+||+|||+||..|+.+++...
T Consensus 77 ~~~~~~l~~~la~~~~~-~----------~v~~~~gg~ea~~~al~~~~~~~ 117 (395)
T 3nx3_A 77 NENIAAAAKNLAKASAL-E----------RVFFTNSGTESIEGAMKTARKYA 117 (395)
T ss_dssp CHHHHHHHHHHHHHHTC-S----------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCC-C----------eEEEeCCHHHHHHHHHHHHHHHh
Confidence 34555677889999883 2 48999999999999999998753
No 189
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=96.36 E-value=0.035 Score=51.94 Aligned_cols=97 Identities=13% Similarity=-0.052 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+|++++++...+ ..+||+|||+||..|++++|...... |. ..++-+|+....-
T Consensus 86 ~~~~~~la~~l~~~~~~~~~---------~v~~~~sGseA~~~al~~~~~~~~~~----G~------~~~~~vi~~~~~y 146 (448)
T 3dod_A 86 NVPATQLAETLIDISPKKLT---------RVFYSDSGAEAMEIALKMAFQYWKNI----GK------PEKQKFIAMKNGY 146 (448)
T ss_dssp EHHHHHHHHHHHHHSCTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCCEEEEEC---
T ss_pred CHHHHHHHHHHHHhCCCCCC---------EEEEeCchHHHHHHHHHHHHHHHHhh----CC------CCCCEEEEECCCC
Confidence 44556678899999865433 48999999999999999999753211 10 0123344444444
Q ss_pred cchHHHHHHhcC------------CceEEeeCCCCCCc-----------CHHHHHHHHH
Q psy1678 250 HSSVERAGLLGG------------VTIRGLPADDSYKL-----------RGDALEAAIE 285 (297)
Q Consensus 250 H~Si~Kaa~~lg------------~~v~~Vp~d~~~~m-----------d~~~L~~~i~ 285 (297)
|-+..-+..+.| ..+..+|.+..++. |+++|+++|+
T Consensus 147 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 205 (448)
T 3dod_A 147 HGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLE 205 (448)
T ss_dssp --------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHH
Confidence 544433333322 24667777766665 4899999997
No 190
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=96.34 E-value=0.045 Score=50.61 Aligned_cols=91 Identities=18% Similarity=0.037 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH 250 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH 250 (297)
....++.+.+++++|.+.+ .-+||+|||++|..|+.++|... + ++-+|+....-|
T Consensus 85 ~~~~~l~~~la~~~~~~~~---------~v~~~~gg~ea~~~a~~~~~~~~-------~---------~~~vi~~~~~yh 139 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLD---------RALLLSTGAESNEAAIRMAKLVT-------G---------KYEIVGFAQSWH 139 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCC---------EEEEESCHHHHHHHHHHHHHHHH-------T---------CCEEEEETTCCC
T ss_pred HHHHHHHHHHHHhCCCCcC---------EEEEeCchHHHHHHHHHHHHHhh-------C---------CCeEEEECCCcC
Confidence 3445566788888886532 48999999999999999887531 1 123454555667
Q ss_pred chHHHHHHhcC-----------CceEEeeCCCCC------------CcCHHHHHHHHHH
Q psy1678 251 SSVERAGLLGG-----------VTIRGLPADDSY------------KLRGDALEAAIEE 286 (297)
Q Consensus 251 ~Si~Kaa~~lg-----------~~v~~Vp~d~~~------------~md~~~L~~~i~~ 286 (297)
.+..-+..+.+ .+++.|+++... .+|+++|+++|++
T Consensus 140 g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 198 (433)
T 1zod_A 140 GMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDR 198 (433)
T ss_dssp CSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHH
T ss_pred CCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHh
Confidence 66655554421 256777664322 3579999999975
No 191
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=96.32 E-value=0.029 Score=52.36 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH 250 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH 250 (297)
....++.+.+++++|.+ ..+||+|||+||..|+.++|.+...+. | .. + .++-+|+....-|
T Consensus 107 ~~~~~l~~~la~~~g~~-----------~v~~~~sGseA~~~al~~a~~~~~~~~---g--~~-~--gr~~vi~~~~~yh 167 (433)
T 1z7d_A 107 VPLGICERYLTNLLGYD-----------KVLMMNTGAEANETAYKLCRKWGYEVK---K--IP-E--NMAKIVVCKNNFS 167 (433)
T ss_dssp HHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHHHHHHHTS---C--CC-T--TCCEEEEETTC--
T ss_pred HHHHHHHHHHHhhcCCC-----------eEEEeCCHHHHHHHHHHHHHHHhhhcc---C--CC-C--CCCeEEEEeCCcC
Confidence 34445556777777743 388999999999999999986432110 0 00 0 0133444444566
Q ss_pred chHHHHHHhcC------------CceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 251 SSVERAGLLGG------------VTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 251 ~Si~Kaa~~lg------------~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
.+...++.+.| .+++.+|.+ |+++|+++|+
T Consensus 168 g~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~ 209 (433)
T 1z7d_A 168 GRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELK 209 (433)
T ss_dssp ------------------------CEEEECTT-----CHHHHHHHHT
T ss_pred CcchhhhcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhC
Confidence 66665555544 245566653 7888888874
No 192
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=96.31 E-value=0.011 Score=54.50 Aligned_cols=78 Identities=10% Similarity=-0.038 Sum_probs=56.7
Q ss_pred HHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchH
Q psy1678 174 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSV 253 (297)
Q Consensus 174 ~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si 253 (297)
.++.+++++++|.+. .+++++||++|..++.+.. . +.-.|+++...|.+.
T Consensus 62 ~~l~~~la~~~g~~~-----------~i~~~sG~~ai~~~~~~~~----~---------------~gd~vl~~~~~y~~~ 111 (389)
T 3acz_A 62 EQFEEMVCSIEGAAG-----------SAAFGSGMGAISSSTLAFL----Q---------------KGDHLIAGDTLYGCT 111 (389)
T ss_dssp HHHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHTTTC----C---------------TTCEEEEESSCCHHH
T ss_pred HHHHHHHHHHhCCCe-----------EEEeCCHHHHHHHHHHHHh----C---------------CCCEEEEeCCCchHH
Confidence 345567888888762 6788889999988887641 0 112567788999987
Q ss_pred HHH----HHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 254 ERA----GLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 254 ~Ka----a~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
..+ +...|++++.||.+ |+++|+++|++
T Consensus 112 ~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~ 143 (389)
T 3acz_A 112 VSLFTHWLPRFGIEVDLIDTS-----DVEKVKAAWKP 143 (389)
T ss_dssp HHHHHHHHHHTTCEEEEECTT-----CHHHHHHTCCT
T ss_pred HHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCC
Confidence 776 57789998888873 78888777753
No 193
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=96.25 E-value=0.02 Score=53.16 Aligned_cols=89 Identities=18% Similarity=0.074 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
...++.+.++++++-++ ..+||+|||++|..|++++|... + ++.+|+....-|.
T Consensus 94 ~~~~l~~~la~~~~~~~----------~v~~~~~Gsea~~~ai~~a~~~~-------~---------~~~vi~~~~~yhg 147 (429)
T 3k28_A 94 IENKLAKLVIERVPSIE----------IVRMVNSGTEATMSALRLARGYT-------G---------RNKILKFIGCYHG 147 (429)
T ss_dssp HHHHHHHHHHHHSTTCS----------EEEEESSHHHHHHHHHHHHHHHH-------T---------CCEEEEEETCCCC
T ss_pred HHHHHHHHHHHhCCCCC----------EEEEeCChHHHHHHHHHHHHHhh-------C---------CCEEEEECCCcCC
Confidence 34455667788875222 48999999999999999998641 1 2234545555565
Q ss_pred hHHHHHHhcCCceEEeeCCCCCCc--------------CHHHHHHHHHH
Q psy1678 252 SVERAGLLGGVTIRGLPADDSYKL--------------RGDALEAAIEE 286 (297)
Q Consensus 252 Si~Kaa~~lg~~v~~Vp~d~~~~m--------------d~~~L~~~i~~ 286 (297)
+...+....|..+..++......+ |+++|++.|++
T Consensus 148 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 196 (429)
T 3k28_A 148 HGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQ 196 (429)
T ss_dssp SCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHH
T ss_pred CcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHh
Confidence 444444333332222222111111 89999999875
No 194
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=96.09 E-value=0.023 Score=53.19 Aligned_cols=87 Identities=14% Similarity=0.024 Sum_probs=56.5
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.+ ..+||+|||+||..|+.++|.+...+. | .. + .++-+|+....-|.+..
T Consensus 122 ~l~~~la~~~g~~-----------~v~~~~sGseA~~~al~~~~~~~~~~~---g--~~-~--g~~~vi~~~~~yhg~~~ 182 (439)
T 2oat_A 122 EYEEYITKLFNYH-----------KVLPMNTGVEAGETACKLARKWGYTVK---G--IQ-K--YKAKIVFAAGNFWGRTL 182 (439)
T ss_dssp HHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHHHHHHHTT---C--CC-T--TCCEEEEETTCCCCSSH
T ss_pred HHHHHHHHhcCCC-----------EEEEeCCHHHHHHHHHHHHHHHhhhcc---C--CC-C--CCCeEEEEcCCCCCCCH
Confidence 4455666767743 388999999999999999986532110 1 00 0 11335555556777777
Q ss_pred HHHHhcC------------CceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 255 RAGLLGG------------VTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 255 Kaa~~lg------------~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
.++.+.| .+++.+|.+ |+++|+++|+
T Consensus 183 ~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~ 220 (439)
T 2oat_A 183 SAISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQ 220 (439)
T ss_dssp HHHTTCCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTT
T ss_pred hHhhcCCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhC
Confidence 7776655 366777754 7888888885
No 195
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=96.02 E-value=0.072 Score=49.97 Aligned_cols=98 Identities=14% Similarity=-0.044 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.++++++++.+.+ .-+||+|||+||..|++++|.....+ |. ..+..+|.....-
T Consensus 94 ~~~~~~la~~l~~~~~~~~~---------~v~~~~gGseA~~~al~~~~~~~~~~----g~------~~~~~vi~~~~~y 154 (460)
T 3gju_A 94 TEASITLAKMIIDRAPKGMS---------RVYFGLSGSDANETNIKLIWYYNNVL----GR------PEKKKIISRWRGY 154 (460)
T ss_dssp CHHHHHHHHHHHHHSCTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCCEEEEETTCC
T ss_pred CHHHHHHHHHHHhhCCCCcC---------EEEEeCchHHHHHHHHHHHHHHHHhc----CC------CCCCEEEEECCCc
Confidence 34555677888888765543 48999999999999999999764221 10 0123455555666
Q ss_pred cchHHHHHHhcCC------------ceEEeeCCC-----CCCcC--------HHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGV------------TIRGLPADD-----SYKLR--------GDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa~~lg~------------~v~~Vp~d~-----~~~md--------~~~L~~~i~~ 286 (297)
|-+..-+..+.|. .++.+|+.. +..++ +++|+++|++
T Consensus 155 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~ 216 (460)
T 3gju_A 155 HGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILA 216 (460)
T ss_dssp CCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHh
Confidence 6655555544332 567777532 22344 5888888874
No 196
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=96.02 E-value=0.0037 Score=58.72 Aligned_cols=92 Identities=13% Similarity=-0.013 Sum_probs=60.7
Q ss_pred chhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 167 PACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
+....+|....+++++++|.+. .-+++++||++|..++.+.++. .+ .|+++
T Consensus 87 ~~~~~~e~~a~~~la~~~g~~~----------~~v~~~sGs~a~~~a~~~~~~~------------------Gd-~Vl~~ 137 (447)
T 3h7f_A 87 EHVDVVENLARDRAKALFGAEF----------ANVQPHSGAQANAAVLHALMSP------------------GE-RLLGL 137 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSE----------EECCCSSHHHHHHHHHHHHCCT------------------TC-EEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCc----------eEEEeCCHHHHHHHHHHHhcCC------------------CC-EEEec
Confidence 3444667666699999999875 2444788999999888775321 12 45666
Q ss_pred CCCcch-HHHH--HHhc--CCceEEeeCC-CCCCcCHHHHHHHHHHH
Q psy1678 247 DQAHSS-VERA--GLLG--GVTIRGLPAD-DSYKLRGDALEAAIEED 287 (297)
Q Consensus 247 ~~aH~S-i~Ka--a~~l--g~~v~~Vp~d-~~~~md~~~L~~~i~~~ 287 (297)
..+|.+ +..+ ..+. ++.++.+|++ +++.+|+++|++++++.
T Consensus 138 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 184 (447)
T 3h7f_A 138 DLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEF 184 (447)
T ss_dssp CGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHH
T ss_pred CcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhc
Confidence 666655 2111 1122 3456667777 57899999999999753
No 197
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=96.01 E-value=0.015 Score=54.73 Aligned_cols=78 Identities=10% Similarity=0.074 Sum_probs=55.8
Q ss_pred HHHHHHcCCCccccccCCCCCCeEE---cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC-CCcchH
Q psy1678 178 DWLGKMLDLPKEFLACSGGKGGGVI---QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD-QAHSSV 253 (297)
Q Consensus 178 ~~l~~llg~~~~~~~~~~~~~~G~~---tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~-~aH~Si 253 (297)
+.+++++|.+. .++ +++||+||..++.+. +. +.-.|++++ ..|...
T Consensus 81 ~~lA~l~g~e~-----------alv~p~~~sGt~A~~~al~al----l~---------------pGD~Vl~~~~~~y~~~ 130 (427)
T 3hvy_A 81 RVYANIFNTES-----------AFVRPHFVNGTHAIGAALFGN----LR---------------PNDTMMSICGMPYDTL 130 (427)
T ss_dssp HHHHHHHTCSE-----------EEEETTCCSHHHHHHHHHHHT----CC---------------TTCEEEECSSSCCGGG
T ss_pred HHHHHHhCCCc-----------eEEeCCCCcHHHHHHHHHHHh----cC---------------CCCEEEEeCCCCchhH
Confidence 46788888864 466 899999998877653 11 112455565 566544
Q ss_pred H-----------HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 254 E-----------RAGLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 254 ~-----------Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
. +.+...|+.++.||. ++|.+|+++|+++|++
T Consensus 131 ~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~ 173 (427)
T 3hvy_A 131 HDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKK 173 (427)
T ss_dssp HHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHH
T ss_pred HHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhC
Confidence 4 445557889999999 7899999999999974
No 198
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=95.99 E-value=0.037 Score=51.99 Aligned_cols=97 Identities=13% Similarity=-0.024 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+|++++++.+.+ .-+||+|||+||..|++++|+....+ |. ..++.+|.....-
T Consensus 93 ~~~~~~la~~l~~~~~~~~~---------~v~~~~ggseA~~~al~~~~~~~~~~----g~------~~~~~vi~~~~~y 153 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFD---------RVFYTNSGSESVDTMIRMVRRYWDVQ----GK------PEKKTLIGRWNGY 153 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCC---------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhCCCCCC---------EEEEeCchHHHHHHHHHHHHHHHHhc----CC------CCCCEEEEECCCc
Confidence 44556678899999876542 48999999999999999999864321 10 0123345555555
Q ss_pred cchHHHHHHhcC------------CceEEeeCCC-----CCCcC--------HHHHHHHHHH
Q psy1678 250 HSSVERAGLLGG------------VTIRGLPADD-----SYKLR--------GDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa~~lg------------~~v~~Vp~d~-----~~~md--------~~~L~~~i~~ 286 (297)
|-+..-+..+.| .++..+|+.. ++ +| +++|++.|++
T Consensus 154 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~ 214 (459)
T 4a6r_A 154 HGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILE 214 (459)
T ss_dssp CCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHH
Confidence 644444444322 1456666432 23 66 7888888864
No 199
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=95.97 E-value=0.054 Score=51.08 Aligned_cols=77 Identities=16% Similarity=0.057 Sum_probs=55.6
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+++++++|.+. .+++++|+++|..++.+.. . +.-.|+++...|.+..
T Consensus 118 ~l~~~lA~l~g~~~-----------~v~~~sG~~Ai~~al~~l~----~---------------~Gd~Vi~~~~~y~~~~ 167 (445)
T 1qgn_A 118 VLEEKISALEGAES-----------TLLMASGMCASTVMLLALV----P---------------AGGHIVTTTDCYRKTR 167 (445)
T ss_dssp HHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHS----C---------------SSCEEEEETTSCHHHH
T ss_pred HHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHh----C---------------CCCEEEEcCCCchhHH
Confidence 34457788888753 5666777799999887531 0 1124667888898877
Q ss_pred HH----HHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 255 RA----GLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 255 Ka----a~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.. +..+|+.++.||.+ |+++|+++|++
T Consensus 168 ~~~~~~~~~~G~~v~~v~~~-----d~~~l~~ai~~ 198 (445)
T 1qgn_A 168 IFIETILPKMGITATVIDPA-----DVGALELALNQ 198 (445)
T ss_dssp HHHHHTGGGGTCEEEEECSS-----CHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhcc
Confidence 64 45678999999876 89999999975
No 200
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=95.96 E-value=0.044 Score=50.73 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
....++.+++++.++-++ ..+||+|||++|..|++++|..
T Consensus 95 ~~~~~l~~~la~~~~~~~----------~v~~~~sGsea~~~ai~~a~~~ 134 (434)
T 3l44_A 95 ALEVKFAKMLKEAMPALD----------KVRFVNSGTEAVMTTIRVARAY 134 (434)
T ss_dssp HHHHHHHHHHHHHCTTCS----------EEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCC----------EEEEeCchHHHHHHHHHHHHHh
Confidence 344456678888886222 4899999999999999999864
No 201
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=95.92 E-value=0.0085 Score=54.15 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=52.8
Q ss_pred HHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHH
Q psy1678 176 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVER 255 (297)
Q Consensus 176 v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~K 255 (297)
+.+.+++++|.+.+ .-+||+|||+++..++.+. + + + .|++...+|.++..
T Consensus 64 l~~~la~~~~~~~~---------~v~~~~g~~~al~~~~~~~------~----g----------d-~vl~~~p~y~~~~~ 113 (364)
T 1lc5_A 64 LHQALARHHQVPAS---------WILAGNGETESIFTVASGL------K----P----------R-RAMIVTPGFAEYGR 113 (364)
T ss_dssp HHHHHHHHHTSCGG---------GEEEESSHHHHHHHHHHHH------C----C----------S-EEEEEESCCTHHHH
T ss_pred HHHHHHHHHCcCHH---------HEEECCCHHHHHHHHHHHc------C----C----------C-eEEEeCCCcHHHHH
Confidence 44456666687653 5899999999999888775 1 1 1 35567789999999
Q ss_pred HHHhcCCceEEeeCCCCCCcC
Q psy1678 256 AGLLGGVTIRGLPADDSYKLR 276 (297)
Q Consensus 256 aa~~lg~~v~~Vp~d~~~~md 276 (297)
++...|.+++.||.+....++
T Consensus 114 ~~~~~g~~~~~v~~~~~~~~~ 134 (364)
T 1lc5_A 114 ALAQSGCEIRRWSLREADGWQ 134 (364)
T ss_dssp HHHHTTCEEEEEECCGGGTTC
T ss_pred HHHHcCCeEEEEeCCcccccc
Confidence 999999999999998532344
No 202
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=95.86 E-value=0.022 Score=51.94 Aligned_cols=37 Identities=16% Similarity=0.022 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 173 EVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 173 E~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
..++.+|+++++| ++ ..+||+|||+||..|+.+++..
T Consensus 80 ~~~l~~~la~~~g-~~----------~v~~~~~gt~a~~~al~~~~~~ 116 (392)
T 3ruy_A 80 LGPWYEKVAKLTN-KE----------MVLPMNTGAEAVETAIKTARRW 116 (392)
T ss_dssp HHHHHHHHHHHHT-CS----------EEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-CC----------EEEEeCcHHHHHHHHHHHHHHh
Confidence 3456678899998 33 4899999999999999988764
No 203
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=95.77 E-value=0.028 Score=51.96 Aligned_cols=42 Identities=17% Similarity=0.088 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
......++.+|+++.++-++ ..+||+|||++|..|+++||..
T Consensus 90 ~~~~~~~la~~l~~~~~~~~----------~v~~~~ggsea~~~al~~a~~~ 131 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVPSIE----------MVRFVNSGTEACMAVLRIMRAY 131 (427)
T ss_dssp CCHHHHHHHHHHHHHSTTCS----------EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCC----------EEEEeCCHHHHHHHHHHHHHHh
Confidence 34566678889999987322 4899999999999999998764
No 204
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=95.74 E-value=0.045 Score=49.87 Aligned_cols=76 Identities=14% Similarity=0.024 Sum_probs=53.5
Q ss_pred HHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHH
Q psy1678 176 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVER 255 (297)
Q Consensus 176 v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~K 255 (297)
+.+.+++++|.++ .+++++||++|..++.+... +.-.|+++..+|.++..
T Consensus 57 l~~~la~~~~~~~-----------~i~~~sGt~a~~~~~~~~~~-------------------~g~~vl~~~~~~~~~~~ 106 (386)
T 1cs1_A 57 VQRALAELEGGAG-----------AVLTNTGMSAIHLVTTVFLK-------------------PGDLLVAPHDCYGGSYR 106 (386)
T ss_dssp HHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHCC-------------------TTCEEEEETTCCHHHHH
T ss_pred HHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHhC-------------------CCCEEEEecCCcHhHHH
Confidence 4456677777763 45556669999998887511 11246778889988555
Q ss_pred H----HHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 256 A----GLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 256 a----a~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+ +...|++++.+|.+ |+++|+++|++
T Consensus 107 ~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~ 136 (386)
T 1cs1_A 107 LFDSLAKRGCYRVLFVDQG-----DEQALRAALAE 136 (386)
T ss_dssp HHHHHHTTTSCEEEEECTT-----CHHHHHHHHHT
T ss_pred HHHHHHHhcCCEEEEeCCC-----CHHHHHHhhcc
Confidence 4 46678899988875 89999998864
No 205
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=95.57 E-value=0.065 Score=48.26 Aligned_cols=36 Identities=14% Similarity=-0.025 Sum_probs=29.6
Q ss_pred HHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHH
Q psy1678 174 VVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKA 219 (297)
Q Consensus 174 ~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~ 219 (297)
.++.+++++++|.|+ ..++|+|||+++..++.++|.
T Consensus 73 ~~l~~~la~~~g~~~----------~v~~~~g~t~a~~~~~~~~~~ 108 (375)
T 2eh6_A 73 EELAHKLVKHFWTEG----------KVFFANSGTESVEAAIKLARK 108 (375)
T ss_dssp HHHHHHHHHTSSSCE----------EEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCC----------eEEEeCchHHHHHHHHHHHHH
Confidence 345678899999853 489999999999999988764
No 206
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=95.52 E-value=0.21 Score=46.47 Aligned_cols=97 Identities=13% Similarity=0.017 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
......++.+|++++++.+. . -+||+|||+||..|++++|..... .|. ..++-+|+....
T Consensus 89 ~~~~~~~la~~l~~~~~~~~---------~-v~~~~ggseA~~~al~~~~~~~~~----~g~------~~~~~vi~~~~~ 148 (452)
T 3n5m_A 89 SHEPAIKLAEKLNEWLGGEY---------V-IFFSNSGSEANETAFKIARQYYAQ----KGE------PHRYKFMSRYRG 148 (452)
T ss_dssp EEHHHHHHHHHHHHHHTSCE---------E-EEEESSHHHHHHHHHHHHHHHHHT----TTC------TTCCEEEEETTC
T ss_pred CCHHHHHHHHHHHHhCCCCc---------e-EEEeCchHHHHHHHHHHHHHHHHh----cCC------CCCCEEEEECCC
Confidence 44566678889999988754 2 889999999999999999865321 110 012345555556
Q ss_pred CcchHHHHHHhcCC------------ceEEeeCCCCCCc------------CHHHHHHHHH
Q psy1678 249 AHSSVERAGLLGGV------------TIRGLPADDSYKL------------RGDALEAAIE 285 (297)
Q Consensus 249 aH~Si~Kaa~~lg~------------~v~~Vp~d~~~~m------------d~~~L~~~i~ 285 (297)
-|-+..-+..+.|. .+..+|.....+. ++++|+++|+
T Consensus 149 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~ 209 (452)
T 3n5m_A 149 YHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMT 209 (452)
T ss_dssp CCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHH
T ss_pred cCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHH
Confidence 66555545544332 3556665322222 2899999987
No 207
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=95.51 E-value=0.2 Score=47.27 Aligned_cols=97 Identities=15% Similarity=0.130 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.....++.+.++++++.+.+ .-+||+||||||..|++++|.....+ |. ..++.+|.....-
T Consensus 98 ~~~~~~lae~l~~~~~~~~~---------~v~~~~sGseA~~~aik~a~~~~~~~----g~------~~~~~ii~~~~~y 158 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDLN---------HVFFAGGGSEANDTNIRMVRTYWQNK----GQ------PEKTVIISRKNAY 158 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhCCCCCC---------EEEEeCCHHHHHHHHHHHHHHHHHhc----CC------CCCCEEEEEcCcC
Confidence 34455567788888865433 48999999999999999999864321 10 0123345455556
Q ss_pred cchHHHHHHhcCC-----------ceEEeeCCC-----CCCcC--------HHHHHHHHHH
Q psy1678 250 HSSVERAGLLGGV-----------TIRGLPADD-----SYKLR--------GDALEAAIEE 286 (297)
Q Consensus 250 H~Si~Kaa~~lg~-----------~v~~Vp~d~-----~~~md--------~~~L~~~i~~ 286 (297)
|-+..-+..+.|. .+..||... ++ +| +++|++.|++
T Consensus 159 Hg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~ 218 (472)
T 3hmu_A 159 HGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILE 218 (472)
T ss_dssp CCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHh
Confidence 6555444444332 466677532 22 45 7888888864
No 208
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=95.44 E-value=0.07 Score=49.41 Aligned_cols=42 Identities=19% Similarity=0.075 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
......++.++++++++-++ ..+||+|||+||..|+.+||..
T Consensus 94 ~~~~~~~l~~~la~~~~~~~----------~v~~~~sgseA~~~al~~ar~~ 135 (434)
T 2epj_A 94 PGEAEVLLAEKILGYVKRGG----------MIRFVNSGTEATMTAIRLARGY 135 (434)
T ss_dssp CCHHHHHHHHHHHHHHCTTC----------EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCC----------EEEEeCCHHHHHHHHHHHHHHh
Confidence 34555667788888884122 4889999999999999999753
No 209
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=95.39 E-value=0.092 Score=49.18 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
.....++.++++++++.+.. ..-+||+||||||..|+++||..
T Consensus 103 ~~~~~~la~~l~~~~~~~~~--------~~v~~~~sGseA~~~Alk~a~~~ 145 (451)
T 3oks_A 103 YEGYVAVCEQLNRLTPVRGD--------KRSALFNSGSEAVENAVKIARSH 145 (451)
T ss_dssp CHHHHHHHHHHHHHSSCCSS--------EEEEEESSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCcCCC--------CEEEEeCcHHHHHHHHHHHHHHh
Confidence 44555778899999864311 14899999999999999999875
No 210
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=95.34 E-value=0.089 Score=49.07 Aligned_cols=42 Identities=29% Similarity=0.260 Sum_probs=35.1
Q ss_pred hhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHH
Q psy1678 168 ACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKA 219 (297)
Q Consensus 168 ~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~ 219 (297)
....++.++.+|++++++ ..+ .-+||+|||+||..|+.+||.
T Consensus 94 ~~~~~~~~la~~l~~~~~-~~~---------~v~~~~gg~eA~~~al~~ar~ 135 (453)
T 2cy8_A 94 ASHPLEVRWAERIVAAFP-SIR---------KLRFTGSGTETTLLALRVARA 135 (453)
T ss_dssp SSCHHHHHHHHHHHHHCT-TCS---------EEEEESCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhCC-CCC---------EEEEeCCHHHHHHHHHHHHHH
Confidence 356788999999999986 222 488999999999999999985
No 211
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=95.29 E-value=0.21 Score=46.35 Aligned_cols=102 Identities=10% Similarity=-0.056 Sum_probs=71.9
Q ss_pred ccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCce
Q psy1678 162 TWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 241 (297)
Q Consensus 162 ~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~ 241 (297)
.|....+..++-+.+.+|+.+.-+.+-.. .....++|+||++|...++.+..+. .+ -
T Consensus 67 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~i~i~~t~G~~~al~~~~~~l~~~-----------------~~-d 123 (405)
T 3k7y_A 67 PYLLGNGTEDFSTLTQNLIFGNNSKYIED-----KKICTIQCIGGTGAIFVLLEFLKML-----------------NV-E 123 (405)
T ss_dssp CCCTTSSCHHHHHHHHHHHHCSSCTTTTT-----TCEEEEEEEHHHHHHHHHHHHHHTT-----------------TC-C
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCCccccc-----cceEEEEcCchHHHHHHHHHHHHhc-----------------CC-C
Confidence 45555566677777888886554433110 0013589999999988877654221 12 3
Q ss_pred EEEecCCCcchHHHHHHhcCCceEEeeC-CC-CCCcCHHHHHHHHHH
Q psy1678 242 VGYCSDQAHSSVERAGLLGGVTIRGLPA-DD-SYKLRGDALEAAIEE 286 (297)
Q Consensus 242 ~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~-d~-~~~md~~~L~~~i~~ 286 (297)
.|++++-+-+....+++..|.+++.||+ ++ ++.+|+++|+++|++
T Consensus 124 ~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 170 (405)
T 3k7y_A 124 TLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRN 170 (405)
T ss_dssp EEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHH
T ss_pred EEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHh
Confidence 5677778888888999999999999998 44 589999999999975
No 212
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=95.29 E-value=0.039 Score=50.42 Aligned_cols=78 Identities=14% Similarity=0.001 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC-
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ- 248 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~- 248 (297)
..+|..+-+++++++|.++. ...++|+|||+++..++.+. + | + .|+++..
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~--------~~~~~~~ggt~a~~~~~~~~-----~-----g----------d-~Vl~~~~~ 107 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDEN--------DKCVGFNRTSSAILATILAL-----K-----P----------K-KVIHYLPE 107 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTT--------EEEEEESSHHHHHHHHHHHH-----C-----C----------S-EEEEECSS
T ss_pred hHHHHHHHHHHHHHhCCCCc--------ceEEEEcChHHHHHHHHHhC-----C-----C----------C-EEEEecCC
Confidence 34667788888899998411 13799999999999988864 1 1 1 3445555
Q ss_pred --CcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHH
Q psy1678 249 --AHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAA 283 (297)
Q Consensus 249 --aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~ 283 (297)
+|+++.+++...|.+++.| +|+++|+++
T Consensus 108 y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~ 137 (374)
T 2aeu_A 108 LPGHPSIERSCKIVNAKYFES-------DKVGEILNK 137 (374)
T ss_dssp SSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT
T ss_pred CCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc
Confidence 5788777888888877766 367766654
No 213
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=95.28 E-value=0.056 Score=49.93 Aligned_cols=67 Identities=10% Similarity=0.048 Sum_probs=46.6
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
.+...++++.+.+|+.+-++.+++ .-+||+|+++++.. +.+ .+. +.-.|++
T Consensus 97 ~~g~~~l~~~ia~~~~~~~~~~~~---------~i~~t~G~~~al~~-l~~----l~~---------------~gd~Vl~ 147 (432)
T 3ei9_A 97 EQGAKPLRAAIAKTFYGGLGIGDD---------DVFVSDGAKCDISR-LQV----MFG---------------SNVTIAV 147 (432)
T ss_dssp TTCCHHHHHHHHHHHHTTTTCCGG---------GEEEESCHHHHHHH-HHH----HHC---------------TTCCEEE
T ss_pred CCCCHHHHHHHHHHHHccCCCCcc---------eEEECCChHHHHHH-HHH----HcC---------------CCCEEEE
Confidence 345578899899998875555543 58999999998764 221 111 1124667
Q ss_pred cCCCcchHHHHHHhcC
Q psy1678 246 SDQAHSSVERAGLLGG 261 (297)
Q Consensus 246 s~~aH~Si~Kaa~~lg 261 (297)
++-.|.++..++...|
T Consensus 148 ~~p~y~~~~~~~~~~g 163 (432)
T 3ei9_A 148 QDPSYPAYVDSSVIMG 163 (432)
T ss_dssp EESCCTHHHHHHHHHT
T ss_pred eCCCCHHHHHHHHHcC
Confidence 8899999999888777
No 214
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=95.25 E-value=0.036 Score=51.77 Aligned_cols=82 Identities=11% Similarity=0.003 Sum_probs=54.0
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
..|...++|+ .+++++|.+. .++++|||+||..++.+. +. +.-.|+
T Consensus 80 ~~p~~~~le~----~lA~l~g~~~-----------~i~~ssGt~Ai~~al~~l----~~---------------~Gd~Vi 125 (415)
T 2fq6_A 80 GTLTHFSLQQ----AMCELEGGAG-----------CVLFPCGAAAVANSILAF----IE---------------QGDHVL 125 (415)
T ss_dssp CCHHHHHHHH----HHHHHHTCSE-----------EEEESSHHHHHHHHHHTT----CC---------------TTCEEE
T ss_pred CCchHHHHHH----HHHHHhCCCe-----------EEEeCCHHHHHHHHHHHH----hC---------------CCCEEE
Confidence 4566566665 5677888752 678899999998887752 11 112567
Q ss_pred ecCCCcchHHHHH----HhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 245 CSDQAHSSVERAG----LLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 245 ~s~~aH~Si~Kaa----~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
++...|.+....+ ...|+.++.|+.+ |+++|+++|+
T Consensus 126 ~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~~~le~ai~ 165 (415)
T 2fq6_A 126 MTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQ 165 (415)
T ss_dssp EETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGGCC
T ss_pred EeCCCchHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhhc
Confidence 7888998887655 3457777777654 5555555554
No 215
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=95.13 E-value=0.14 Score=47.36 Aligned_cols=40 Identities=23% Similarity=0.214 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
....++.++++++++.++ ..+||+|||+||..|+++||..
T Consensus 93 ~~~~~la~~l~~~~~~~~----------~v~~~~sGsea~~~al~~a~~~ 132 (429)
T 4e77_A 93 EMEVKMAQLVTDLVPTMD----------MVRMVNSGTEATMSAIRLARGY 132 (429)
T ss_dssp HHHHHHHHHHHHHSTTCS----------EEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCC----------EEEEeCcHHHHHHHHHHHHHHh
Confidence 455566778888886332 4899999999999999998764
No 216
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=95.12 E-value=0.037 Score=52.45 Aligned_cols=78 Identities=14% Similarity=0.092 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcc
Q psy1678 172 LEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHS 251 (297)
Q Consensus 172 iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 251 (297)
.-.++.+|+++++|.++ .++++|||+++..++. .+. +.-.|+++...|.
T Consensus 134 ~~~~l~~~la~~~g~~~-----------~i~~~sGt~al~~~l~-----~~~---------------~Gd~Vi~~~~~y~ 182 (464)
T 1ibj_A 134 TRDALESLLAKLDKADR-----------AFCFTSGMAALSAVTH-----LIK---------------NGEEIVAGDDVYG 182 (464)
T ss_dssp HHHHHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHT-----TSC---------------TTCEEEEESSCCH
T ss_pred HHHHHHHHHHHHhCCCe-----------EEEECCHHHHHHHHHH-----HhC---------------CCCEEEEECCCch
Confidence 44567889999999752 7888999988765442 111 1124667888998
Q ss_pred hHHHH----HHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 252 SVERA----GLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 252 Si~Ka----a~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
+...+ +...|..++.||++ |+++|+++|+
T Consensus 183 ~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~ 215 (464)
T 1ibj_A 183 GSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIG 215 (464)
T ss_dssp HHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCC
T ss_pred hHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhc
Confidence 88764 45678899999875 8888888875
No 217
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=95.10 E-value=0.36 Score=45.13 Aligned_cols=44 Identities=16% Similarity=0.052 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
......++.++++++++.+.. ..-+||+||||||..|+++||..
T Consensus 105 ~~~~~~~la~~l~~~~~~~~~--------~~v~~~~sGseA~~~alk~a~~~ 148 (453)
T 4ffc_A 105 PYEQYVQVAELLNALTPGDHD--------KRTALFNSGAEAVENAIKVARLA 148 (453)
T ss_dssp CCHHHHHHHHHHHHHSSCSSC--------EEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCC--------cEEEEeCcHHHHHHHHHHHHHHh
Confidence 345556778899999874321 14899999999999999999864
No 218
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=94.93 E-value=0.068 Score=47.36 Aligned_cols=75 Identities=9% Similarity=-0.057 Sum_probs=53.4
Q ss_pred HHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHH
Q psy1678 176 MLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVER 255 (297)
Q Consensus 176 v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~K 255 (297)
+.+.+++++|.+. .+++++||+++..++.+.. . +.-.|+++..+|.+...
T Consensus 3 l~~~la~~~g~~~-----------~i~~~sG~~a~~~~~~~~~----~---------------~g~~v~~~~~~~~~~~~ 52 (331)
T 1pff_A 3 LEGKIAKLEHAEA-----------CAATASGMGAIAASVWTFL----K---------------AGDHLISDDCLYGCTHA 52 (331)
T ss_dssp HHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHC----C---------------TTCEEEEESCCCHHHHH
T ss_pred HHHHHHHHhCCCe-----------EEEeCChHHHHHHHHHHhc----C---------------CCCEEEEcCCCcchHHH
Confidence 3457788888762 5667777999998887641 1 11246778899999877
Q ss_pred HH----HhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 256 AG----LLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 256 aa----~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
++ ...|++++.+|. +|+++|+++|+
T Consensus 53 ~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~ 81 (331)
T 1pff_A 53 LFEHQLRKFGVEVDFIDM-----AVPGNIEKHLK 81 (331)
T ss_dssp HHHTHHHHTTCEEEEECT-----TSTTHHHHTCC
T ss_pred HHHHHHHhcCCEEEEeCC-----CCHHHHHHhhc
Confidence 75 347888888876 47777777765
No 219
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=94.88 E-value=0.12 Score=47.75 Aligned_cols=42 Identities=21% Similarity=0.114 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
......++.++++++++ ..+ .-+||+|||++|..|+.+||..
T Consensus 90 ~~~~~~~l~~~l~~~~~-~~~---------~v~~~~~g~ea~~~al~~ar~~ 131 (424)
T 2e7u_A 90 PSPLEVALAKKVKRAYP-FVD---------LVRFVNSGTEATMSALRLARGY 131 (424)
T ss_dssp CCHHHHHHHHHHHHHCT-TCC---------EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC-CCC---------EEEEeCCHHHHHHHHHHHHHHh
Confidence 34566677788888885 221 4889999999999999998754
No 220
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=94.86 E-value=0.27 Score=44.83 Aligned_cols=74 Identities=15% Similarity=0.006 Sum_probs=48.5
Q ss_pred chhhHHHHHHHHHHHHHcC-CCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 167 PACTELEVVMLDWLGKMLD-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 167 p~~~~iE~~v~~~l~~llg-~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
+....+++.+.+|+. .| .+++ .-++|+|+|+++..++.+ +. +.-.|++
T Consensus 75 ~g~~~lr~~la~~l~--~g~~~~~---------~v~~~~G~~~al~~~~~~-----~~---------------~gd~Vl~ 123 (400)
T 3asa_A 75 FGLPALRQKLSEDFY--RGFVDAK---------EIFISDGAKVDLFRLLSF-----FG---------------PNQTVAI 123 (400)
T ss_dssp TCCHHHHHHHHHTTS--TTSSCGG---------GEEEESCHHHHHHHHHHH-----HC---------------SSCEEEE
T ss_pred CCCHHHHHHHHHHHH--cCCCCHH---------HEEEccChHHHHHHHHHH-----cC---------------CCCEEEE
Confidence 345556655554432 46 4433 589999999998764321 11 1114566
Q ss_pred cCCCcchHHHHHHhcCCc-eEEeeCCC
Q psy1678 246 SDQAHSSVERAGLLGGVT-IRGLPADD 271 (297)
Q Consensus 246 s~~aH~Si~Kaa~~lg~~-v~~Vp~d~ 271 (297)
..-+|.+...++...|.. ++.||+++
T Consensus 124 ~~p~y~~~~~~~~~~g~~~~~~~~~~~ 150 (400)
T 3asa_A 124 QDPSYPAYLDIARLTGAKEIIALPCLQ 150 (400)
T ss_dssp EESCCHHHHHHHHHTTCSEEEEEECCG
T ss_pred CCCCcHHHHHHHHHcCCcceEecccch
Confidence 778899999999989988 88888764
No 221
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=94.79 E-value=0.3 Score=46.11 Aligned_cols=99 Identities=14% Similarity=-0.033 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCC
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQ 248 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~ 248 (297)
......++.+|++++++.+.+ .-+||+||||||..|++++|.....+ |. ..++.+|.....
T Consensus 95 ~~~~~~~la~~l~~~~~~~~~---------~v~~~~sGseA~~~Aik~a~~~~~~~----g~------~~~~~vi~~~~~ 155 (476)
T 3i5t_A 95 ATSPAARLAEKIATLTPGDLN---------RIFFTTGGSTAVDSALRFSEFYNNVL----GR------PQKKRIIVRYDG 155 (476)
T ss_dssp BCHHHHHHHHHHHTTSSTTCC---------EEEEESSHHHHHHHHHHHHHHHHHHT----TC------TTCCEEEEETTC
T ss_pred CCHHHHHHHHHHHhcCCCCcC---------EEEEeCchHHHHHHHHHHHHHHHHhc----CC------CCCCEEEEEcCC
Confidence 345666788899999975432 48999999999999999999864321 10 012345555566
Q ss_pred CcchHHHHHHhcCC------------ceEEeeCCCC--C-CcC--------HHHHHHHHHH
Q psy1678 249 AHSSVERAGLLGGV------------TIRGLPADDS--Y-KLR--------GDALEAAIEE 286 (297)
Q Consensus 249 aH~Si~Kaa~~lg~------------~v~~Vp~d~~--~-~md--------~~~L~~~i~~ 286 (297)
-|-+..-+..+.|. ++..++.... + .+| +++|++.|++
T Consensus 156 yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~ 216 (476)
T 3i5t_A 156 YHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIES 216 (476)
T ss_dssp CCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHh
Confidence 67665555554432 3455554321 1 223 7888888874
No 222
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=94.67 E-value=0.11 Score=48.13 Aligned_cols=80 Identities=9% Similarity=-0.052 Sum_probs=55.0
Q ss_pred cccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceE
Q psy1678 163 WIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLV 242 (297)
Q Consensus 163 ~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~ 242 (297)
|...+...++++.+.+|+. .|++-.. ..-+||+||++++..+ .+. +. +.-.
T Consensus 107 y~~~~g~~~lr~~ia~~~~--~g~~~~~-------~~i~~t~G~~~al~~~-~~l----~~---------------~gd~ 157 (449)
T 3qgu_A 107 YGAEQGQGALREAVASTFY--GHAGRAA-------DEIFISDGSKCDIARI-QMM----FG---------------SKPT 157 (449)
T ss_dssp STTTTCCHHHHHHHHHHHH--TTTTCCG-------GGEEEESCHHHHHHHH-HHH----HC---------------SSSC
T ss_pred CCCCCCcHHHHHHHHHHHH--cCCCCCH-------HHEEEccCHHHHHHHH-HHH----hC---------------CCCE
Confidence 3333446778888888877 5553211 2589999999988765 221 11 1124
Q ss_pred EEecCCCcchHHHHHHhcCCc----------eEEeeCCC
Q psy1678 243 GYCSDQAHSSVERAGLLGGVT----------IRGLPADD 271 (297)
Q Consensus 243 i~~s~~aH~Si~Kaa~~lg~~----------v~~Vp~d~ 271 (297)
|++++-+|.++..++...|.+ ++.+|+++
T Consensus 158 Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ 196 (449)
T 3qgu_A 158 VAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNP 196 (449)
T ss_dssp EEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCG
T ss_pred EEEcCCCChhHHHHHHHcCCcccccccccceeEEEeccc
Confidence 667889999999999999987 88888864
No 223
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=94.19 E-value=0.068 Score=49.22 Aligned_cols=74 Identities=12% Similarity=0.051 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHH
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVE 254 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~ 254 (297)
++.+.+++++|.++ .+++++||+||..++. . +. ..+ .|+++...|.+..
T Consensus 59 ~lr~~la~~~g~~~-----------~i~~~sGt~a~~~al~-~----~~--------------~gd-~Vi~~~~~y~~~~ 107 (393)
T 1n8p_A 59 NLERAVAALENAQY-----------GLAFSSGSATTATILQ-S----LP--------------QGS-HAVSIGDVYGGTH 107 (393)
T ss_dssp HHHHHHHHHTTCSE-----------EEEESCHHHHHHHHHH-T----SC--------------SSC-EEEEESSCCHHHH
T ss_pred HHHHHHHHHhCCCc-----------EEEECChHHHHHHHHH-H----cC--------------CCC-EEEEeCCCchHHH
Confidence 35567888888763 5666677999998876 2 11 012 4566777887555
Q ss_pred H----HHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 255 R----AGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 255 K----aa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
. .+...|++++.||++ | ++|+++|+
T Consensus 108 ~~~~~~~~~~G~~v~~v~~~-----d-~~l~~~i~ 136 (393)
T 1n8p_A 108 RYFTKVANAHGVETSFTNDL-----L-NDLPQLIK 136 (393)
T ss_dssp HHHHHTSTTTCSCCEEESSH-----H-HHHHHHSC
T ss_pred HHHHHHHHHcCcEEEEeCCC-----h-HHHHHhcc
Confidence 5 345568888888876 6 77777664
No 224
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=94.02 E-value=0.091 Score=49.18 Aligned_cols=42 Identities=12% Similarity=-0.084 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHcC-CCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHH
Q psy1678 171 ELEVVMLDWLGKMLD-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT 221 (297)
Q Consensus 171 ~iE~~v~~~l~~llg-~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~ 221 (297)
....++.+.+++++| .+. ..-+||+|||+||..|+++||.+.
T Consensus 101 ~~~~~la~~la~~~~~~~~---------~~v~~~~~gseA~~~aik~a~~~~ 143 (449)
T 2cjg_A 101 VAMARFVETFARVLGDPAL---------PHLFFVEGGALAVENALKAAFDWK 143 (449)
T ss_dssp HHHHHHHHHHHHHHCCTTC---------CEEEEESSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCC---------CEEEEeCchHHHHHHHHHHHHHHh
Confidence 334455667777776 222 248999999999999999998643
No 225
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=93.81 E-value=0.11 Score=48.06 Aligned_cols=81 Identities=20% Similarity=0.121 Sum_probs=53.9
Q ss_pred CchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEe
Q psy1678 166 SPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYC 245 (297)
Q Consensus 166 ~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (297)
.|....+|+ .+++++|.+. .+++++|++++..++. . +. +.-.|++
T Consensus 66 ~p~~~~l~~----~la~~~g~~~-----------~i~~~sG~~ai~~~~~-l----~~---------------~gd~Vl~ 110 (403)
T 3cog_A 66 NPTRNCLEK----AVAALDGAKY-----------CLAFASGLAATVTITH-L----LK---------------AGDQIIC 110 (403)
T ss_dssp CHHHHHHHH----HHHHHHTCSE-----------EEEESCHHHHHHHHHT-T----SC---------------TTCEEEE
T ss_pred CchHHHHHH----HHHHHhCCCc-----------EEEECCHHHHHHHHHH-H----hC---------------CCCEEEE
Confidence 355555555 5566677652 5666667888877765 2 11 1125777
Q ss_pred cCCCcchHHHH----HHhcCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 246 SDQAHSSVERA----GLLGGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 246 s~~aH~Si~Ka----a~~lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
+...|.+.... +...|++++.||++ |+++|+++|++
T Consensus 111 ~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~ 150 (403)
T 3cog_A 111 MDDVYGGTNRYFRQVASEFGLKISFVDCS-----KIKLLEAAITP 150 (403)
T ss_dssp ESSCCHHHHHHHHHTGGGGTCEEEEECTT-----SHHHHHHHCCT
T ss_pred eCCCcchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCc
Confidence 88999885543 45679999999886 88888888753
No 226
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=93.22 E-value=0.3 Score=45.08 Aligned_cols=82 Identities=15% Similarity=0.036 Sum_probs=53.5
Q ss_pred cCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEE
Q psy1678 165 ASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGY 244 (297)
Q Consensus 165 ~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (297)
..|...++|+ .++++.|.+. .+++++|++|+..++.. .. +.-.|+
T Consensus 65 ~~p~~~~l~~----~la~l~g~~~-----------~~~~~sG~~Ai~~~~~l-----~~---------------~gd~Vi 109 (400)
T 3nmy_A 65 HNPTRFAYER----CVAALEGGTR-----------AFAFASGMAATSTVMEL-----LD---------------AGSHVV 109 (400)
T ss_dssp CCHHHHHHHH----HHHHHHTCSE-----------EEEESSHHHHHHHHHTT-----SC---------------TTCEEE
T ss_pred CCHHHHHHHH----HHHHHhCCCC-----------EEEecCHHHHHHHHHHH-----cC---------------CCCEEE
Confidence 3455556665 5777888753 67888889888753211 11 112567
Q ss_pred ecCCCcchHHHHHHh-----cCCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 245 CSDQAHSSVERAGLL-----GGVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 245 ~s~~aH~Si~Kaa~~-----lg~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
++...|.+....... .|+.++.|+.+ |+++|+++|++
T Consensus 110 ~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~ 151 (400)
T 3nmy_A 110 AMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-----DPAAFKAAIRA 151 (400)
T ss_dssp EESSCCHHHHHHHHHTHHHHHCCEEEEECTT-----SHHHHHHHCCT
T ss_pred EeCCCchHHHHHHHHhhHhhcCeEEEEECCC-----CHHHHHHHhcc
Confidence 788899866665433 58888888876 78888887753
No 227
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=92.80 E-value=0.16 Score=48.03 Aligned_cols=44 Identities=7% Similarity=-0.208 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHH
Q psy1678 169 CTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT 221 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~ 221 (297)
..+++..+.+.|+++++...+ ..+||+||||||..|+++||.+.
T Consensus 108 ~~~l~~~la~~l~~~~~~~~~---------~v~f~~sGseA~~~Aik~a~~~~ 151 (472)
T 1ohv_A 108 PENFVEKLRESLLSVAPKGMS---------QLITMACGSCSNENAFKTIFMWY 151 (472)
T ss_dssp BTTHHHHHHHTGGGGCCTTCC---------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcC---------EEEEeCCchhHHHHHHHHHHHHh
Confidence 356777677777777643221 48899999999999999998653
No 228
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=92.72 E-value=0.13 Score=46.93 Aligned_cols=65 Identities=12% Similarity=0.007 Sum_probs=43.9
Q ss_pred HHHHHHHHHhccccc-----cccccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHH
Q psy1678 146 AIVADILSDSIACIG-----FTWIASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGA 217 (297)
Q Consensus 146 svl~d~l~~~lN~n~-----~~~~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~A 217 (297)
..+.+.+...+..+. ..|...+...++.+.+.+|+.+..|++-+. ..-+||+|||+++..++.+.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-------~~i~~t~G~t~al~~~~~~l 118 (417)
T 3g7q_A 49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP-------QNIALTNGSQSAFFYLFNLF 118 (417)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG-------GGEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc-------ccEEEeCCcHHHHHHHHHHH
Confidence 445555555543321 234444556678888889998887765321 25899999999999998876
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=92.20 E-value=0.33 Score=45.91 Aligned_cols=41 Identities=22% Similarity=0.105 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHH
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT 221 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~ 221 (297)
..|.+.-+.|++++..-+ .-.|+++|||||..|+++||.+.
T Consensus 127 ~~~~~lae~l~~~~p~~~----------~v~f~~SGsEA~e~AiklAr~~t 167 (454)
T 4ao9_A 127 LLEGRLARLICERFPQIE----------QLRFTNSGTEANLMALTAALHFT 167 (454)
T ss_dssp SSHHHHHHHHHHHSTTCS----------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCC----------EEEEeCchHHHHHHHHHHHHhcc
Confidence 345556667788875332 37899999999999999999863
No 230
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=91.36 E-value=0.51 Score=43.07 Aligned_cols=81 Identities=11% Similarity=-0.042 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
.++.+.+.+|+. ..|++-.. ...-++|+|+++++..++.+..+ . | ...+..|++++-.
T Consensus 71 ~~lr~aia~~~~-~~g~~~~~------~~~i~~t~G~~~al~~~~~~l~~----~----G-------d~~~~~Vlv~~P~ 128 (391)
T 3bwn_A 71 PELEDAIKDLHG-VVGNAATE------DRYIVVGTGSTQLCQAAVHALSS----L----A-------RSQPVSVVAAAPF 128 (391)
T ss_dssp HHHHHHHHHHHH-HHCSBCCS------SSEEEEEEHHHHHHHHHHHHHHH----T----S-------SSSSEEEEECSSC
T ss_pred HHHHHHHHHHHH-hcCCCCCC------CCeEEEeCChHHHHHHHHHHhcC----C----C-------CCCcceEEEcCCC
Confidence 677777777776 44553210 02589999999999888776421 0 1 0112257788899
Q ss_pred cchHHHHHHhcCCceEEeeCCCC
Q psy1678 250 HSSVERAGLLGGVTIRGLPADDS 272 (297)
Q Consensus 250 H~Si~Kaa~~lg~~v~~Vp~d~~ 272 (297)
|.++..+++..|.+++.+++|.+
T Consensus 129 y~~~~~~~~~~g~~~~~~~~d~~ 151 (391)
T 3bwn_A 129 YSTYVEETTYVRSGMYKWEGDAW 151 (391)
T ss_dssp CTHHHHHHHTTCBTTEEEEEEST
T ss_pred chhHHHHHHHcCCeEEEecCCHH
Confidence 99999999999998888888754
No 231
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=90.35 E-value=0.15 Score=47.38 Aligned_cols=91 Identities=7% Similarity=-0.133 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHHHHHcCC--CccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec
Q psy1678 169 CTELEVVMLDWLGKMLDL--PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS 246 (297)
Q Consensus 169 ~~~iE~~v~~~l~~llg~--~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s 246 (297)
..++++.+.+|+...-+. ++ ..-++|+|+|+++..++.+-.... . ..+ ..+.-.|+++
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~---------~~iv~t~G~~~al~~~~~~l~~~~-~----~~~------~~~Gd~Vlv~ 161 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKD---------RYIVFGVGVTQLIHGLVISLSPNM-T----ATP------DAPESKVVAH 161 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTT---------CEEEEESHHHHHHHHHHHHHSCCT-T----TCT------TSCCEEEEEC
T ss_pred hHHHHHHHHHHHHHhCCcCCCC---------CEEEEeCCHHHHHHHHHHHHhhcc-c----ccc------CCCCCEEEEe
Confidence 577888888888765442 22 248999999999988776531000 0 000 0122367788
Q ss_pred CCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHH
Q psy1678 247 DQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIE 285 (297)
Q Consensus 247 ~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~ 285 (297)
.-.|.++..+++..|..++. +.+|+++|++++.
T Consensus 162 ~P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~ 194 (427)
T 2hox_A 162 APFYPVFREQTKYFDKKGYV------WAGNAANYVNVSN 194 (427)
T ss_dssp SSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSC
T ss_pred CCCcccHHHHHHHcCCeeee------ecCCHHHHHHhhc
Confidence 89999999999999987763 4577778777664
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=89.00 E-value=1.3 Score=41.89 Aligned_cols=44 Identities=11% Similarity=-0.025 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHH
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTM 222 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~ 222 (297)
+..+.++.+.|+++...+-+ --.|+++|||||-.|++.||.+..
T Consensus 110 ~~~~~~lAe~L~~~~p~~~~---------~v~f~~sGsEA~e~AiKlAr~~~~ 153 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSPFDSG---------RVFYTNSGSEANDTMVKMLWFLHA 153 (473)
T ss_dssp EHHHHHHHHHHHHHSSCSSC---------EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCcc---------EEEEeCchHHHHHHHHHHHHHHHH
Confidence 34455566788888865422 377999999999999999998643
No 233
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=88.40 E-value=0.58 Score=45.10 Aligned_cols=93 Identities=11% Similarity=0.014 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHcCC---CccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecC
Q psy1678 171 ELEVVMLDWLGKMLDL---PKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSD 247 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~---~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 247 (297)
..|..+-.|+.+..+. +... ..-++|+|+++++..++.+...+.+- .+.-.|++++
T Consensus 143 lr~~ia~~~~~~~~~~~~~~~~~-------~~I~~t~G~~eal~~~~~~l~~~~l~--------------~~Gd~Vlv~~ 201 (546)
T 2zy4_A 143 ISEKIVRQYIIREMGADAIPSES-------VNLFAVEGGTAAMAYIFESLKLNGLL--------------KAGDKVAIGM 201 (546)
T ss_dssp HHHHHHHHHHHHHTTCTTSCGGG-------EEEEEEEHHHHHHHHHHHHHHHTTSS--------------CTTCEEEEEE
T ss_pred HHHHHHHHHHHHhccCCCCCCCc-------ceEEEECCHHHHHHHHHHHhhhhhcC--------------CCCCEEEEeC
Confidence 4455555677766543 2110 15889999999998887663111110 1112466777
Q ss_pred CCcchHHHHHHhc--CCceEEeeCCC--CCCcCHHHHHHHH
Q psy1678 248 QAHSSVERAGLLG--GVTIRGLPADD--SYKLRGDALEAAI 284 (297)
Q Consensus 248 ~aH~Si~Kaa~~l--g~~v~~Vp~d~--~~~md~~~L~~~i 284 (297)
-+|+....++.+. |+.++.||+++ ++.+|+++|++.+
T Consensus 202 P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 242 (546)
T 2zy4_A 202 PVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLK 242 (546)
T ss_dssp SCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGG
T ss_pred CCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhh
Confidence 8899988887765 56888898875 3579999998765
No 234
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=82.50 E-value=0.29 Score=46.41 Aligned_cols=39 Identities=23% Similarity=0.188 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHcC-CCccccccCCCCCCeEEcCChhHHHHHHHHHHHHH
Q psy1678 171 ELEVVMLDWLGKMLD-LPKEFLACSGGKGGGVIQGTASEATLVALLGAKAK 220 (297)
Q Consensus 171 ~iE~~v~~~l~~llg-~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~ 220 (297)
..+.++.+.|+++++ .+ .-.|+++|||||..|+++||..
T Consensus 140 ~~~~~Lae~L~~~~p~~~-----------~v~~~nSGseA~~~Aik~ar~~ 179 (465)
T 2yky_A 140 ENEALFAEAVCDRFPSID-----------LVRFTNSGTEANLMALATATAI 179 (465)
Confidence 344555567777774 32 3789999999999999999853
No 235
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=77.46 E-value=4.7 Score=37.84 Aligned_cols=43 Identities=21% Similarity=0.106 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHH
Q psy1678 171 ELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKT 221 (297)
Q Consensus 171 ~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~ 221 (297)
+.+.++.+.|++++..+.. ..-.|+++|||||-.|++.||.+.
T Consensus 107 ~~~~~lae~L~~~~p~~~~--------~~v~f~~sGsEA~e~AlklAr~~t 149 (456)
T 4atq_A 107 EGYVAVTEQLNRLTPGDHA--------KRTVLFNSGAEAVENAVKVARLAT 149 (456)
T ss_dssp HHHHHHHHHHHHHSSCSSC--------EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCC--------cEEEEeCChHHHHHHHHHHHhhhh
Confidence 3444566778888754321 135789999999999999999863
No 236
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=75.42 E-value=2.6 Score=39.62 Aligned_cols=33 Identities=36% Similarity=0.713 Sum_probs=29.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy1678 57 IMGDVNEFKDFAKAMVDYVGNYLENIRDRRVLP 89 (297)
Q Consensus 57 ~p~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~ 89 (297)
.++++++|++.++++++.+.+|+++++++||.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 36 (481)
T 4e1o_A 4 GSMEPEEYRERGREMVDYICQYLSTVRERRVTP 36 (481)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 478999999999999999999999988888764
No 237
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=74.61 E-value=2.6 Score=39.53 Aligned_cols=31 Identities=68% Similarity=1.150 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy1678 59 GDVNEFKDFAKAMVDYVGNYLENIRDRRVLP 89 (297)
Q Consensus 59 ~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~ 89 (297)
+++++|++.++++++.+.+|+++++++||.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 31 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLP 31 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 5789999999999999999999988888764
No 238
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=72.90 E-value=9 Score=33.94 Aligned_cols=58 Identities=17% Similarity=0.082 Sum_probs=40.3
Q ss_pred CeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC-cchHHHHHHhcCCceEEeeCCC
Q psy1678 199 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA-HSSVERAGLLGGVTIRGLPADD 271 (297)
Q Consensus 199 ~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a-H~Si~Kaa~~lg~~v~~Vp~d~ 271 (297)
..++|.|||.+|.-.-+++--+.+ | -+.+||+++.. -..-.+.++.+|.+|+.++.+.
T Consensus 71 ~~vv~~G~ssGN~g~alA~~a~~~------G---------~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~ 129 (325)
T 1j0a_A 71 DVVITVGAVHSNHAFVTGLAAKKL------G---------LDAILVLRGKEELKGNYLLDKIMGIETRVYDAKD 129 (325)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHT------T---------CEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCS
T ss_pred CEEEEcCCcchHHHHHHHHHHHHh------C---------CcEEEEECCCCCCCchHHHHHHCCCEEEEeCcch
Confidence 378898888888765554422211 1 36788888887 5566677788999999988664
No 239
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=64.70 E-value=11 Score=35.70 Aligned_cols=100 Identities=14% Similarity=0.024 Sum_probs=52.3
Q ss_pred ccCchhhHHHHHHHHHHHHHcCCCccccccCCCCCCe--EEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCce
Q psy1678 164 IASPACTELEVVMLDWLGKMLDLPKEFLACSGGKGGG--VIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANL 241 (297)
Q Consensus 164 ~~~p~~~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G--~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~ 241 (297)
..+-..-++|..+++..++|||.... .+| +=.-.||.||+.+..+- +.. |. .=+
T Consensus 93 gGce~vD~iE~la~~rak~lF~a~~A--------~w~VNVQP~SGs~AN~avy~Al----l~P----GD--------~il 148 (490)
T 3ou5_A 93 GGAEVVDEIELLCQRRALEAFDLDPA--------QWGVNVQPYSGSPANLAVYTAL----LQP----HD--------RIM 148 (490)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCTT--------TEEEECCCSSHHHHHHHHHHHH----CC-----CC--------CEE
T ss_pred CCChHHHHHHHHHHHHHHHHhCCCcc--------ccCCCCCcCCHHHHHHHHHHHH----cCC----CC--------EEE
Confidence 33455779999999999999998753 133 33467999998777763 110 10 000
Q ss_pred EEEecCCCcchHH-----HHHHhcCC--ceEEeeCC-CCCCcCHHHHHHHHHHH
Q psy1678 242 VGYCSDQAHSSVE-----RAGLLGGV--TIRGLPAD-DSYKLRGDALEAAIEED 287 (297)
Q Consensus 242 ~i~~s~~aH~Si~-----Kaa~~lg~--~v~~Vp~d-~~~~md~~~L~~~i~~~ 287 (297)
.+=.+.-.|.|-- +-..+.|. +...-++| +++.+|.+.|++..++.
T Consensus 149 g~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~ 202 (490)
T 3ou5_A 149 GLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF 202 (490)
T ss_dssp CBC----------------------------CBCEETTTTEECHHHHHHHHHHH
T ss_pred ecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhc
Confidence 1112233444432 22233344 56666777 57999999999988764
No 240
>1yhu_B Giant hemoglobins B chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=64.61 E-value=17 Score=27.79 Aligned_cols=64 Identities=13% Similarity=0.047 Sum_probs=47.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHH
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYL 79 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~ 79 (297)
.+++.+|+.+++.++.-|..+.++|++...+ +.++.- .....-..++.|..+.+-++..+...+
T Consensus 55 ~~~s~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~~l 121 (144)
T 1yhu_B 55 NIHTPAFRAHATRVLGGLDMCIALLDDEPVLNTQLAHLAKQHETRGVEAAHYDTVNHAVMMGVENVI 121 (144)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHc
Confidence 3688999999999999999999999875433 333321 222335778889888888887777655
No 241
>2zs0_B Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_B* 2d2m_B* 2zfo_B* 2zs1_B*
Probab=64.07 E-value=16 Score=27.94 Aligned_cols=75 Identities=9% Similarity=-0.027 Sum_probs=49.4
Q ss_pred HHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 6 HKKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 6 ~~~~~~~~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
++.|..-....+++.+|+.+|+.++..|..+.++|++...+ +.++.- .....-..++.|..+.+-++..+.+.+.
T Consensus 43 k~~F~~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~~l~~~lg 120 (142)
T 2zs0_B 43 RGLFSRVNGNDIDSSEFQAHSLRVLGGLDMCVASLDDVPVLNALLARLNSQHDSRGIPAAGYPAFVASAISAVRATVG 120 (142)
T ss_dssp GGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHHHHHC
T ss_pred HHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 34444322334578899999999999999999999875533 333331 2222356778888777777777766543
No 242
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=63.92 E-value=6.3 Score=36.70 Aligned_cols=31 Identities=42% Similarity=0.799 Sum_probs=25.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy1678 59 GDVNEFKDFAKAMVDYVGNYLENIRDRRVLP 89 (297)
Q Consensus 59 ~~~e~f~~~l~~v~d~i~~~~~~~~~~pv~~ 89 (297)
+++++|++.++++++.+.+|+++..++||.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYP 31 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Confidence 4678899999999999999998887777654
No 243
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=63.72 E-value=27 Score=30.98 Aligned_cols=77 Identities=13% Similarity=0.103 Sum_probs=45.4
Q ss_pred CeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc-----------chHHHHHHhcCCceEEe
Q psy1678 199 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH-----------SSVERAGLLGGVTIRGL 267 (297)
Q Consensus 199 ~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH-----------~Si~Kaa~~lg~~v~~V 267 (297)
.+++|.|+|.+|.-.-+++--+.+ | -+.+||+++..- ..-.+..+.+|.+|+.+
T Consensus 68 ~~vv~~G~ssGN~g~alA~~a~~~------G---------~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~ 132 (341)
T 1f2d_A 68 THLVSIGGRQSNQTRMVAALAAKL------G---------KKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVI 132 (341)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHH------T---------CEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEEC
T ss_pred CEEEEcCCcchHHHHHHHHHHHHh------C---------CceEEEeccCCCccccccccccccccHHHHHhCCCEEEEe
Confidence 488888888888755544322211 1 356788876653 22666778899999988
Q ss_pred eCCCCCCcCHHHHHHHHHHHHHCC
Q psy1678 268 PADDSYKLRGDALEAAIEEDLKKG 291 (297)
Q Consensus 268 p~d~~~~md~~~L~~~i~~~~~~G 291 (297)
+.+...... +...+..++..+++
T Consensus 133 ~~~~~~~~~-~~~~~~a~~l~~~~ 155 (341)
T 1f2d_A 133 EDGFDIGMR-KSFANALQELEDAG 155 (341)
T ss_dssp CCCCCSSCC-HHHHHHHHHHHHTT
T ss_pred CCccchhHH-HHHHHHHHHHHhcC
Confidence 865432211 33344444444443
No 244
>1x9f_B Erythrocruorin, globin II, extracellular, globin AIII, globin B; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_B*
Probab=60.58 E-value=23 Score=27.20 Aligned_cols=64 Identities=13% Similarity=0.027 Sum_probs=47.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
.++.+|+.+++.++.-|..+.++|++...+ +.++.- .....-.+++.|..+.+-++..+.+.+.
T Consensus 56 ~~s~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~~l~~~lg 122 (145)
T 1x9f_B 56 TSHPAFIAHADRVLGGLDIAISTLDQPATLKEELDHLQVQHEGRKIPDNYFDAFKTAILHVVAAQLG 122 (145)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhC
Confidence 578899999999999999999999875533 333321 2223357788898888888877776554
No 245
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=59.83 E-value=20 Score=31.65 Aligned_cols=58 Identities=12% Similarity=0.033 Sum_probs=35.3
Q ss_pred CeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcch--------HHHHHHhcCCceEEeeCC
Q psy1678 199 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSS--------VERAGLLGGVTIRGLPAD 270 (297)
Q Consensus 199 ~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~S--------i~Kaa~~lg~~v~~Vp~d 270 (297)
.+++|.|+|.+|.-.-+++--+ .+ | -+.+|++++..-.. -.+..+.+|.+|+.++.+
T Consensus 68 ~~vv~~GassGN~g~alA~~a~---~~---G---------~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~ 132 (338)
T 1tzj_A 68 DTLVSIGGIQSNQTRQVAAVAA---HL---G---------MKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG 132 (338)
T ss_dssp CEEEEEEETTCHHHHHHHHHHH---HH---T---------CEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-
T ss_pred CEEEEcCCchhHHHHHHHHHHH---Hh---C---------CceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc
Confidence 4788866677675544443221 11 1 35678888776432 566778889999987765
Q ss_pred C
Q psy1678 271 D 271 (297)
Q Consensus 271 ~ 271 (297)
.
T Consensus 133 ~ 133 (338)
T 1tzj_A 133 F 133 (338)
T ss_dssp -
T ss_pred c
Confidence 3
No 246
>4b4y_A Neuroglobin; transport protein, nervous system evolution, globin evolutio cnidarian, metazoan; HET: HEM; 2.30A {Symsagittifera roscoffensis}
Probab=59.79 E-value=53 Score=25.32 Aligned_cols=63 Identities=14% Similarity=0.129 Sum_probs=46.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhcc-c-cCCCCCCChHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFS-Q-MGSNIMGDVNEFKDFAKAMVDYVGNYL 79 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p-~-l~~~~p~~~e~f~~~l~~v~d~i~~~~ 79 (297)
..+.+|+.+|+.++..|..+..+|++...+ +.++. | .....-..++.|..+.+-++..+.+.+
T Consensus 63 ~~~~~~~~H~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~~l~~~l 128 (154)
T 4b4y_A 63 RSHPRFKSHAKSIGKVISDCLVDLNGVKKHEPKLSSLGAMHTKKKVPTELFGKLGGCILTQVVKRV 128 (154)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHTTGGGGGGGHHHHGGGGGGSCTTTSCTHHHHHHHHHHHHHHHHHS
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHc
Confidence 577899999999999999999999875533 33333 1 333355778888888888777777644
No 247
>1x9f_D Globin C, hemoglobin chain D1, globin III, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_D*
Probab=57.96 E-value=21 Score=27.23 Aligned_cols=65 Identities=12% Similarity=0.035 Sum_probs=47.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
.++.+|+.+++.++.-|..+.++|++...+ +.++.- .....-..++.|..+.+-++..+.+.+..
T Consensus 54 ~~s~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~~l~~~lg~ 121 (140)
T 1x9f_D 54 IYSPEFGAHSQRVLSGLDITISMLDTPDMLAAQLAHLKVQHVERNLKPEFFDIFLKHLLHVLGDRLGT 121 (140)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 578899999999999999999999875533 333321 12223577888988888888877776653
No 248
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=56.49 E-value=39 Score=23.42 Aligned_cols=53 Identities=11% Similarity=0.082 Sum_probs=34.8
Q ss_pred CceEEEecCCCcchH-----HHHHHhc---CCceEEeeCCCCCCcCHHHHHHHHHHHHHC--CCccEE
Q psy1678 239 ANLVGYCSDQAHSSV-----ERAGLLG---GVTIRGLPADDSYKLRGDALEAAIEEDLKK--GKIPFY 296 (297)
Q Consensus 239 ~~~~i~~s~~aH~Si-----~Kaa~~l---g~~v~~Vp~d~~~~md~~~L~~~i~~~~~~--G~~Pf~ 296 (297)
+++++|++...++|- .+|-++| |+....+.++.+ ..+++.+.+.... -.+|.+
T Consensus 2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~-----~~~~~~l~~~~g~~~~~vP~i 64 (93)
T 1t1v_A 2 SGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQD-----NALRDEMRTLAGNPKATPPQI 64 (93)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC-----HHHHHHHHHHTTCTTCCSCEE
T ss_pred CCEEEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECCCC-----HHHHHHHHHHhCCCCCCCCEE
Confidence 367899999999994 5666654 777778888754 2455556554432 256754
No 249
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=56.40 E-value=33 Score=30.51 Aligned_cols=79 Identities=15% Similarity=0.030 Sum_probs=44.9
Q ss_pred CeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcch--------HHHHHHhcCCceEEeeCC
Q psy1678 199 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSS--------VERAGLLGGVTIRGLPAD 270 (297)
Q Consensus 199 ~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~S--------i~Kaa~~lg~~v~~Vp~d 270 (297)
.+++|.|||.+|.-.-+++--+.+ | -+.+||+++..-.. -.+..+.+|.+|+.++.+
T Consensus 82 ~~vv~~s~tsGN~g~alA~aa~~~------G---------~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~ 146 (342)
T 4d9b_A 82 DTLITAGAIQSNHVRQTAAVAAKL------G---------LHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDAL 146 (342)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHH------T---------CEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCC
T ss_pred CEEEEcCCcccHHHHHHHHHHHHh------C---------CcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECch
Confidence 478888877777644443322211 1 35678888665432 345677899999888765
Q ss_pred CCCCcCH-HHHHHHHHHHHHCCCccEE
Q psy1678 271 DSYKLRG-DALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 271 ~~~~md~-~~L~~~i~~~~~~G~~Pf~ 296 (297)
. +. +.+++..++..+++..+++
T Consensus 147 ~----~~~~~~~~~a~~l~~~~~~~~~ 169 (342)
T 4d9b_A 147 T----DPDAQLQTLATRIEAQGFRPYV 169 (342)
T ss_dssp S----SHHHHHHHHHHHHHHTTCCEEE
T ss_pred h----hHHHHHHHHHHHHHhcCCceEE
Confidence 3 22 3344444554555544443
No 250
>1yhu_D Hemoglobin B2 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=54.98 E-value=19 Score=27.78 Aligned_cols=72 Identities=13% Similarity=-0.024 Sum_probs=47.5
Q ss_pred HHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCC-CCChHHHHHHHHHHHHHHHH
Q psy1678 6 HKKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNI-MGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 6 ~~~~~~~~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~-p~~~e~f~~~l~~v~d~i~~ 77 (297)
++.|..-.....+..+|+.+|+.++..|..+.++|++...+ +.++.- ..... -.+++.|..+.+-++..+.+
T Consensus 47 k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~~~~gV~p~~f~~~~~~Ll~~l~~ 122 (149)
T 1yhu_D 47 VGLFGAVKGDEVNSNEFKAHCIRVVNGLDSSIGLLSDPATLNEQLSHLATQHKARSGVTKGGFSAIAQSFLRVMPQ 122 (149)
T ss_dssp GGGGGGGTSSSTTSHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence 34444433344578999999999999999999999875533 333321 11222 46778888777777666655
No 251
>1x46_A Globin chain, hemoglobin component VII; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.50A {Tokunagayusurika akamusi}
Probab=53.29 E-value=15 Score=28.39 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=41.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhh---cchh-hhhcc-c-cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRD---RYVQ-LQRFS-Q-MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~---~~v~-~~v~p-~-l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.+..+|+.+++.++..|..+.++|++ ..++ +.++. | .....-..++.|..+.+-++..+.+
T Consensus 56 ~~~~~~~~h~~~v~~~l~~~v~~ld~~~~~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~~l~~ 122 (150)
T 1x46_A 56 KDTAPFALHATRIVSVINEAIALMGVAENRPALKNVLKQQGINHKGRGVTAAHFEEFETALEAFLES 122 (150)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred hhChHHHHHHHHHHHHHHHHHHHccCcCcHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 44889999999999999999999988 3322 22222 1 1122256778888777777666655
No 252
>1yhu_A Hemoglobin A1 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=51.48 E-value=26 Score=26.99 Aligned_cols=64 Identities=14% Similarity=0.086 Sum_probs=45.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
..+.+|+.+++.++.-|..|.++|++...+ +.++.- .....-.+++.|..+.+-++..+.+.+.
T Consensus 54 ~~s~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~~lg 120 (145)
T 1yhu_A 54 MASPEFKAHIARVLGGLDRVISMLDNQATLDADLAHLKSQHDPRTIDPVNFVVFRKALIATVAGTFG 120 (145)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHGGGCCCTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHcc
Confidence 367899999999999999999999885543 233221 1122356778888877777777766443
No 253
>1yhu_C Hemoglobin B1A chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=46.86 E-value=24 Score=27.24 Aligned_cols=62 Identities=8% Similarity=-0.055 Sum_probs=42.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCC-CCCChHHHHHHHHHHHHHHHH
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.+++.+|+.+++.++.-|..+..+|++...+ +.++.- .... .-.+++.|..+.+-++..+.+
T Consensus 58 ~~~~~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~ 123 (148)
T 1yhu_C 58 DINSPEFQGHVVRVMGGLDILINALDDIPTLESMLDHLAGQHAVRDGVTGAGFQLMATVLMESLPQ 123 (148)
T ss_dssp GTTSHHHHHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHHHHHTSTTCCTTHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999999999885433 222221 1222 346667777766666665554
No 254
>1spg_A Hemoglobin; carbon monoxide, R-state, teleost FISH effect, oxygen transport; HET: HEM; 1.95A {Leiostomus xanthurus} SCOP: a.1.1.2
Probab=46.65 E-value=34 Score=26.24 Aligned_cols=60 Identities=13% Similarity=0.217 Sum_probs=44.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYL 79 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~ 79 (297)
++.+|+.+|+.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+
T Consensus 54 ~~~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~l 116 (144)
T 1spg_A 54 QTPQVRNHGAVIMAAVGKAVKSIDN--LVGGLSQLSELHAFKLRVDPANFKILAHNIILVISMYF 116 (144)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHTTTC--HHHHHHHHHHHHHTTSCCCTHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHHh--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHc
Confidence 7889999999999999999999988 33443331 2223 45677888888777777766533
No 255
>1h97_A Globin-3; HET: HEM; 1.17A {Paramphistomum epiclitum} SCOP: a.1.1.2 PDB: 1kfr_A*
Probab=45.82 E-value=48 Score=25.50 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=47.5
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 15 IMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 15 ~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.++++.+|+.+|+.++.-|..|.++|++...+ +.++.- .....-.+++.|..+.+-++..+..
T Consensus 56 ~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~~V~p~~f~~~~~~Ll~~l~~ 121 (147)
T 1h97_A 56 NVMQSEGIKHYARTLTEAIVHMLKEISNDAEVKKIAAQYGKDHTSRKVTKDEFMSGEPIFTKYFQN 121 (147)
T ss_dssp TGGGSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 35778999999999999999999999986544 334332 3344567889999888777776665
No 256
>3bom_B Hemoglobin subunit beta-4; FISH hemoglobin, structural genomics community request, protein structure initiative, PSI-2; HET: HEM; 1.35A {Oncorhynchus mykiss} PDB: 2r1h_B* 3bcq_B* 1spg_B*
Probab=45.63 E-value=18 Score=28.01 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=46.8
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
++++.+|+.+|+.++.-+..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+..
T Consensus 54 l~~~~~~~~h~~~v~~al~~~v~~ldd--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~lg~ 120 (147)
T 3bom_B 54 IMGNPAVAKHGKTVMHGLDRAVQNLDD--IKNTYVTLSVMHSEKLFVDPDNFRLLADCITVCVAAKLGP 120 (147)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHCTTC--HHHHTHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHhHhh--HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHcCc
Confidence 456789999999999999999999988 33333331 2222 4567788888888888877776553
No 257
>2c0k_A Hemoglobin; oxygen transport, heme, iron, metal-binding; HET: HEM; 2.6A {Gasterophilus intestinalis}
Probab=44.76 E-value=28 Score=26.95 Aligned_cols=62 Identities=6% Similarity=0.077 Sum_probs=43.8
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhh---hcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIR---DRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~---~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.+.+.+|+.+++.++..|..+.++|+ +...+ +.++.- .....-.+++.|..+.+-++..+.+
T Consensus 53 l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~~~~l~~~l~~L~~~H~~~~V~p~~f~~~~~~Ll~~l~~ 120 (151)
T 2c0k_A 53 LPENARFKTHGTRILRQVDEGVKALSVDFGDKKFDDVWKKLAQTHHEKKVERRSYNELKDIIIEVVCS 120 (151)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Confidence 45779999999999999999999998 43332 222221 2233557788888777777766655
No 258
>2zs0_C Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_C* 2d2m_C* 2zfo_C* 2zs1_C*
Probab=44.60 E-value=17 Score=28.04 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=44.3
Q ss_pred HHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCC-CCChHHHHHHHHHHHHHHH
Q psy1678 6 HKKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNI-MGDVNEFKDFAKAMVDYVG 76 (297)
Q Consensus 6 ~~~~~~~~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~-p~~~e~f~~~l~~v~d~i~ 76 (297)
++.|..-....+++.+|+.+|+.++..|..+.++|++...+ +.++.- ..... -.+++.|..+.+-++..+.
T Consensus 47 k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~H~~~~gV~p~~f~~~~~~Ll~~l~ 121 (147)
T 2zs0_C 47 QGLFSGVSADNPDSADFRAHCVRVVNGLDVAINMLNDPAVLNEQLAHLSAQHQARAGVAAAHFDVMAEAFAEVMP 121 (147)
T ss_dssp GGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHGG
T ss_pred HHhccccCccCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHH
Confidence 44454433355678999999999999999999999875433 333321 11122 4566777766655554443
No 259
>2vyw_A Hemoglobin; trematode, oxygen binding; HET: HEM; 1.8A {Fasciola hepatica}
Probab=44.00 E-value=28 Score=26.89 Aligned_cols=63 Identities=8% Similarity=0.098 Sum_probs=46.5
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 15 IMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 15 ~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.++++.+|+.+|+.++..+..|.++|++...+ +.++.- .....-.+++.|..+.+-++..+..
T Consensus 57 ~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~~V~p~~f~~~~~~Ll~~l~~ 122 (148)
T 2vyw_A 57 NVGQSEGIRYYGRTLGEELIRLLKAASNPSVLEERIVQGAKDHKARPVTKDQFTGAAPIFIKFFQG 122 (148)
T ss_dssp TGGGCSHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCCHHHHHHTHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999885543 333331 2233457888888877777776665
No 260
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.92 E-value=52 Score=26.79 Aligned_cols=52 Identities=12% Similarity=0.059 Sum_probs=41.3
Q ss_pred CceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccE
Q psy1678 239 ANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPF 295 (297)
Q Consensus 239 ~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf 295 (297)
.+..++.....-+.+..-+.++|+++.....+. .++++..|++.+++|..-+
T Consensus 95 ~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~-----~~e~~~~i~~l~~~G~~vv 146 (196)
T 2q5c_A 95 NELALIAYKHSIVDKHEIEAMLGVKIKEFLFSS-----EDEITTLISKVKTENIKIV 146 (196)
T ss_dssp SEEEEEEESSCSSCHHHHHHHHTCEEEEEEECS-----GGGHHHHHHHHHHTTCCEE
T ss_pred CcEEEEeCcchhhHHHHHHHHhCCceEEEEeCC-----HHHHHHHHHHHHHCCCeEE
Confidence 577788888888889999999999888777653 4566789999999997543
No 261
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=43.21 E-value=49 Score=33.43 Aligned_cols=76 Identities=13% Similarity=-0.140 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCC-CCcCCCCce-EEEecCCCcch
Q psy1678 175 VMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDW-KDSDIIANL-VGYCSDQAHSS 252 (297)
Q Consensus 175 ~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~-~~~~~~~~~-~i~~s~~aH~S 252 (297)
++-+.|+++++-+.- ..-.|+++|||||-.|++.|+.+...+. |..- .+.....|. +|.....=|-+
T Consensus 428 ~Lae~L~~~~p~~~l--------~~vff~~SGSeA~E~AlK~A~r~~~~~~---g~~~~~~~~~~~r~~iI~~~~syHG~ 496 (831)
T 4a0g_A 428 KCAELLLDGVGKGWA--------SRVYFSDNGSTAIEIALKMAFRKFCVDH---NFCEATEEEKHIVVKVIALRGSYHGD 496 (831)
T ss_dssp HHHHHHHHTTTTTTC--------CEEEEESSHHHHHHHHHHHHHHHHHHTT---TC---------CCEEEEEETTCCCCS
T ss_pred HHHHHHHHhCCCCCC--------CEEEECCChhHHHHHHHHHHHHHHHhhc---CCCccccccccCccEEEEecCCcccC
Confidence 344566777753210 1378999999999999999953322211 1000 000000233 34444556777
Q ss_pred HHHHHHhcC
Q psy1678 253 VERAGLLGG 261 (297)
Q Consensus 253 i~Kaa~~lg 261 (297)
-.-++.+.|
T Consensus 497 T~gals~tg 505 (831)
T 4a0g_A 497 TLGAMEAQA 505 (831)
T ss_dssp SHHHHHTSC
T ss_pred ceeeeeccC
Confidence 777777655
No 262
>3d1k_B Hemoglobin subunit beta-1/2; antarctic FISH hemoglobin, intermediate R/T quaternary structure, oxidation pathway, heme, iron, metal-binding; HET: HEM; 1.25A {Dusky notothen} SCOP: a.1.1.2 PDB: 1t1n_B* 1la6_B* 3nfe_B* 3ng6_B* 2h8f_B* 1pbx_B* 1s5x_B* 1s5y_B* 1hbh_B* 2h8d_B* 2peg_B* 3gkv_B* 3gqg_B*
Probab=42.73 E-value=14 Score=28.55 Aligned_cols=63 Identities=8% Similarity=0.088 Sum_probs=45.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
+++.+|+.+|+.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+..
T Consensus 55 ~~~~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~ll~~l~~~lg~ 120 (146)
T 3d1k_B 55 MSNANVAAHGIKVLHGLDRGMKNMDN--IADAYTDLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMGH 120 (146)
T ss_dssp HHCHHHHHHHHHHHHHTHHHHHTGGG--HHHHTHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHHHHGG
T ss_pred hcCHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 45689999999999999999999988 33433331 2222 4567788888888888877775543
No 263
>2zs0_A Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_A* 2d2m_A* 2zfo_A* 2zs1_A*
Probab=42.52 E-value=18 Score=27.60 Aligned_cols=71 Identities=7% Similarity=0.043 Sum_probs=43.7
Q ss_pred HHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHH
Q psy1678 6 HKKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVG 76 (297)
Q Consensus 6 ~~~~~~~~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~ 76 (297)
++.|..-....++..+|+.+|..++.-|..+.++|++...+ +.++.- .....-..++.|..+.+-++..+.
T Consensus 43 k~~F~~~~~~~~~~~~~~~h~~~v~~al~~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~~l~ 116 (140)
T 2zs0_A 43 RALFSGVGVDDMNSAAFTAHCLRVTGALNRLISQLDQQATINADLAHLAGQHASRNLDASNFAAMGQAVMSVVP 116 (140)
T ss_dssp GGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHGG
T ss_pred HHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 34444333344578899999999999999999999875433 333321 111224666777766655554443
No 264
>1out_A Hemoglobin I; heme, oxygen transport, respiratory protein, erythrocyte; HET: HEM; 2.30A {Oncorhynchus mykiss} SCOP: a.1.1.2 PDB: 1ouu_A*
Probab=41.44 E-value=34 Score=26.24 Aligned_cols=59 Identities=10% Similarity=0.084 Sum_probs=42.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNY 78 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~ 78 (297)
++.+|+.+|+.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.
T Consensus 53 ~~~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~ 114 (143)
T 1out_A 53 GSGPVKKHGGIIMGAIGKAVGLMDD--LVGGMSALSDLHAFKLRVDPGNFKILSHNILVTLAIH 114 (143)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTC--HHHHTHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHHh--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999988 33333331 2222 4567788887777777766653
No 265
>1x9f_C Erythrocruorin, globin III, extracellular, globin C; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_C*
Probab=41.37 E-value=43 Score=25.88 Aligned_cols=73 Identities=11% Similarity=0.032 Sum_probs=47.4
Q ss_pred HHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCC-CCCChHHHHHHHHHHHHHHHH
Q psy1678 5 IHKKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 5 ~~~~~~~~~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~ 77 (297)
+++.|..-....++..+|+.+|+.++.-|..+.++|++...+ +.++.- .... .-..++.|..+.+-++..+.+
T Consensus 50 ~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~H~~~lgV~p~~f~~~~~~Ll~~l~~ 126 (153)
T 1x9f_C 50 VNDLFKRVDIEHAEGPKFSAHALRILNGLDLAINLLDDPPALDAALDHLAHQHEVREGVQKAHFKKFGEILATGLPQ 126 (153)
T ss_dssp HHHHTGGGTGGGTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhcCccCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHH
Confidence 344555433334678999999999999999999998875433 233321 1222 356778888777777666655
No 266
>1ith_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.50A {Urechis caupo} SCOP: a.1.1.2
Probab=41.28 E-value=35 Score=25.94 Aligned_cols=60 Identities=7% Similarity=0.089 Sum_probs=43.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.++.+|+.+++.++..+..+.++|++. ..+.++.- .....-.+++.|..+.+-++..+.+
T Consensus 56 ~~~~~~~~h~~~v~~al~~~v~~ld~~-l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~ 117 (141)
T 1ith_A 56 RSNPAYKAQTLTVINYLDKVVDALGGN-AGALMKAKVPSHDAMGITPKHFGQLLKLVGGVFQE 117 (141)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHTTTTT-HHHHHHTTHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHcccH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 456899999999999999999999862 33433331 1223456788888887777776664
No 267
>1x9f_A Globin IV, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_A*
Probab=40.52 E-value=36 Score=26.30 Aligned_cols=61 Identities=11% Similarity=0.048 Sum_probs=43.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCC-CCCChHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.++.+|+.+++.++.-|..+.++|++...+ +.++.- .... .-.+++.|..+.+-++..+.+
T Consensus 61 ~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~lgV~p~~f~~~~~~ll~~l~~ 125 (151)
T 1x9f_A 61 PESGEFKSHLVRVANGLKLLINLLDDTLVLQSHLGHLADQHIQRKGVTKEYFRGIGEAFARVLPQ 125 (151)
T ss_dssp TTSSHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence 478899999999999999999999885443 233221 2223 356778888777776666654
No 268
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=40.43 E-value=70 Score=26.79 Aligned_cols=52 Identities=6% Similarity=-0.072 Sum_probs=42.5
Q ss_pred CceEEEecCCCcchHHHHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccE
Q psy1678 239 ANLVGYCSDQAHSSVERAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPF 295 (297)
Q Consensus 239 ~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf 295 (297)
.+..++.....-+.+..-+.++|+++.....+ +.++++..|++.+++|..-+
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~-----~~ee~~~~i~~l~~~G~~vV 158 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTFNLRLDQRSYI-----TEEDARGQINELKANGTEAV 158 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHTCCEEEEEES-----SHHHHHHHHHHHHHTTCCEE
T ss_pred CcEEEEeCchhhhHHHHHHHHhCCceEEEEeC-----CHHHHHHHHHHHHHCCCCEE
Confidence 57778888888888888999999988877655 36788999999999997544
No 269
>1wmu_A Hemoglobin D alpha chain; hemoglobin D, reptilia, the aldabra giant tortoise, geochelone gigantea, oxygen storage/transport complex; HET: HEM; 1.65A {Dipsochelys dussumieri} SCOP: a.1.1.2 PDB: 1v75_A* 2z6n_A* 1hbr_A*
Probab=40.36 E-value=42 Score=25.45 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=44.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
++.+|+.+++.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+.
T Consensus 51 ~s~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~ll~~l~~~lg 114 (141)
T 1wmu_A 51 DSEQIRHHGKKVVGALGDAVKHIDN--LSATLSELSNLHAYNLRVDPVNFKLLSHCFQVVLGAHLG 114 (141)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTS--HHHHTHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHhh--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHcc
Confidence 7789999999999999999999987 22333221 1122 456788888888888887777665
No 270
>3d1k_A Hemoglobin subunit alpha-1; antarctic FISH hemoglobin, intermediate R/T quaternary structure, oxidation pathway, heme, iron, metal-binding; HET: HEM; 1.25A {Dusky notothen} SCOP: a.1.1.2 PDB: 2aa1_A* 1t1n_A* 1la6_A* 3nfe_A* 3ng6_A* 2h8f_A* 1pbx_A* 1s5x_A* 1s5y_A* 1hbh_A* 2h8d_A* 2peg_A* 3gkv_A* 3gqg_A* 1v4x_A* 1v4u_A* 1v4w_A*
Probab=40.10 E-value=34 Score=26.07 Aligned_cols=58 Identities=12% Similarity=0.159 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.+.+|+.+++.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+
T Consensus 52 ~s~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~ll~~l~~ 112 (142)
T 3d1k_A 52 GSPNIKAHGKKVMGGIALAVSKIDD--LKTGLMELSEQHAYKLRVDPSNFKILNHCILVVIST 112 (142)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTC--HHHHHHHHHHHHHHTSCCCGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999987 33333331 1122 346677788777776666665
No 271
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.31 E-value=64 Score=23.34 Aligned_cols=43 Identities=0% Similarity=-0.149 Sum_probs=30.6
Q ss_pred CceEEEecCCCcchHH-----HHHHhc---CCceEEeeCCCCCCcCHHHHHHHHHH
Q psy1678 239 ANLVGYCSDQAHSSVE-----RAGLLG---GVTIRGLPADDSYKLRGDALEAAIEE 286 (297)
Q Consensus 239 ~~~~i~~s~~aH~Si~-----Kaa~~l---g~~v~~Vp~d~~~~md~~~L~~~i~~ 286 (297)
.+++||++...++|-. +|-++| |+....|.++. |+ .+++.+.+
T Consensus 8 m~V~vy~~~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~----~~-~~~~~l~~ 58 (111)
T 2ct6_A 8 MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM----SE-EQRQWMYK 58 (111)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT----CH-HHHHHHHH
T ss_pred cEEEEEEcCCCCCcccchhHHHHHHHHHHcCCCEEEEECCC----CH-HHHHHHHH
Confidence 4689999999999985 666664 77888888875 33 44444544
No 272
>1sct_B Hemoglobin II (carbonmonoxy) (beta chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=38.22 E-value=27 Score=26.90 Aligned_cols=64 Identities=9% Similarity=0.079 Sum_probs=44.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
++..+|+.+++.++..|..+.++|++...+ +.++.- .....-.+++.|..+.+-++..+.+.+.
T Consensus 63 ~~n~~~~~h~~~v~~al~~~v~~ld~~~~l~~~l~~L~~~H~~~~V~p~~f~~~~~~Ll~~l~~~lg 129 (151)
T 1sct_B 63 KDNSKLRGHSITLMYALQNFVDALDDVERLKCVVEKFAVNHINRQISADEFGEIVGPLRQTLKARMG 129 (151)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCCHHHHHTTHHHHHHHHHHHHG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 688999999999999999999999875433 333221 1112346677888777777777766554
No 273
>3bom_A Hemoglobin subunit alpha-4; FISH hemoglobin, structural genomics community request, protein structure initiative, PSI-2; HET: HEM; 1.35A {Oncorhynchus mykiss} PDB: 2r1h_A*
Probab=38.11 E-value=31 Score=26.42 Aligned_cols=58 Identities=10% Similarity=0.159 Sum_probs=40.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.+.+|+.+++.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+
T Consensus 53 ~s~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~ 113 (143)
T 3bom_A 53 GSAPVKKHGITIMNQIDDCVGHMDD--LFGFLTKLSELHATKLRVDPTNFKILAHNLIVVIAA 113 (143)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTTTTC--HHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHHh--HHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHH
Confidence 6789999999999999999999987 33433331 1122 345667787777766666655
No 274
>1hlb_A Hemoglobin (deoxy); oxygen transport; HET: HEM; 2.50A {Caudina arenicola} SCOP: a.1.1.2
Probab=37.98 E-value=35 Score=26.44 Aligned_cols=64 Identities=11% Similarity=0.143 Sum_probs=46.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
.+++.+|+.+++.++..|..+.++|++ ..+ +.++.- .....-.+++.|..+.+.++..+.+.+.
T Consensus 65 l~~n~~~~~h~~~v~~al~~~v~~ld~-~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~~lg 131 (158)
T 1hlb_A 65 LRSSRQMQAHAIRVSSIMSEYVEELDS-DILPELLATLARTHDLNKVGADHYNLFAKVLMEALQAELG 131 (158)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTTCCT-TSHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHCCc-HHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 457789999999999999999999988 433 333331 1112356788888888888777776554
No 275
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=37.77 E-value=9.8 Score=27.22 Aligned_cols=37 Identities=16% Similarity=0.316 Sum_probs=28.0
Q ss_pred HHHHHhhcCCCCCCChHHHH-HHHHHHHHHHHHHHhhh
Q psy1678 4 QIHKKIKNGSIIMGDVNEFK-DFAKAMVDYVGNYLENI 40 (297)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~f~-~~~~~~vd~i~~y~~~~ 40 (297)
+|-..|++|.+.++|-+... +.|+.+|||++-=---+
T Consensus 20 ~I~d~Lr~~~~VvvNL~~ld~~~AqRivDF~sG~~yal 57 (87)
T 3p04_A 20 VIGGAFRDGDAVVFDMSLLSREEARRIVDFAAGLCFAL 57 (87)
T ss_dssp HHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEECCCCCHHHHHHHHHHhccceEEe
Confidence 67889999999888876654 45999999997544333
No 276
>1cg5_A Protein (hemoglobin); oxygen transport; HET: HEM; 1.60A {Dasyatis akajei} SCOP: a.1.1.2 PDB: 1cg8_A*
Probab=37.60 E-value=27 Score=26.67 Aligned_cols=58 Identities=14% Similarity=0.212 Sum_probs=41.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~ 77 (297)
++.+|+.+++.++.-|..+.++|++ +.+.++.- .... .-.+++.|..+.+-++..+.+
T Consensus 52 ~n~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~ll~~l~~ 112 (141)
T 1cg5_A 52 CNEQVKKHGKRVMNALADATHHLDN--LHLHLEDLARKHGENLLVDPHNFHLFADCIVVTLAV 112 (141)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTCTTS--HHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHHHHHHHhHHh--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999988 44444431 1222 346678888777776666655
No 277
>1b0b_A Hemoglobin; hemoprotein, sulfide carrier, globins, oxygen transport, oxygen storage/transport complex; HET: HEM; 1.43A {Lucina pectinata} SCOP: a.1.1.2 PDB: 1ebt_A* 1flp_A* 1moh_A*
Probab=37.25 E-value=19 Score=27.49 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=37.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHH
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDY 74 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~ 74 (297)
..+..+|+.+++.++..|..+.++|++...+ +.++.- .....-.+++.|..+.+-++..
T Consensus 55 l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~~~~V~p~~f~~~~~~Ll~~ 116 (142)
T 1b0b_A 55 VKNTPEMAAQAQSFKGLVSNWVDNLDNAGALEGQCKTFAANHKARGISAGQLEAAFKVLAGF 116 (142)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHH
Confidence 4678899999999999999999999875433 222221 1111234556666555544443
No 278
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=37.04 E-value=49 Score=29.60 Aligned_cols=37 Identities=14% Similarity=0.306 Sum_probs=29.6
Q ss_pred cCCceEEeeCC--------CCCCcC---HHHHHHHHHHHHHCCCccEE
Q psy1678 260 GGVTIRGLPAD--------DSYKLR---GDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 260 lg~~v~~Vp~d--------~~~~md---~~~L~~~i~~~~~~G~~Pf~ 296 (297)
+|++++|||+. ..+.+| .+.|++.|+.+.++|..|++
T Consensus 74 ~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vil 121 (376)
T 3ayr_A 74 NQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVIL 121 (376)
T ss_dssp TTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 69999999873 245677 56788999999999988764
No 279
>1cg5_B Protein (hemoglobin); oxygen transport; HET: HEM; 1.60A {Dasyatis akajei} SCOP: a.1.1.2 PDB: 1cg8_B*
Probab=36.35 E-value=37 Score=26.08 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=45.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
++.+|+.+|++++..|..|.++|++ +.+.++.- .....-.+++.|+.+.+-++..+.+.+..
T Consensus 52 ~~~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~V~p~~f~~~g~~Ll~~l~~~lg~ 115 (141)
T 1cg5_B 52 NDIGVQQHADKVQRALGEAIDDLKK--VEINFQNLSGKHQEIGVDTQNFKLLGQTFMVELALHYKK 115 (141)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHTTTS--HHHHTHHHHHHHHHHTCCTHHHHHHHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 6789999999999999999999987 22333331 11223567788888888888877776553
No 280
>1jf3_A Monomer hemoglobin component III; oxygen storage/transport complex; HET: HEM; 1.40A {Glycera dibranchiata} SCOP: a.1.1.2 PDB: 1jl7_A* 1jf4_A* 1jl6_A* 1vre_A* 1vrf_A* 1hbg_A* 2hbg_A*
Probab=35.87 E-value=68 Score=24.30 Aligned_cols=64 Identities=5% Similarity=0.053 Sum_probs=45.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCC---CCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSN---IMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~---~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
+..+|+.+++.++..|..+.+++.+...+ +.++.- .... ...+++.|..+.+.++..+.+++..
T Consensus 51 ~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~~~g~l~V~p~~f~~~~~~Ll~~l~~~lg~ 120 (147)
T 1jf3_A 51 SDPGVAELGAKVLAQIGVAVSHLGDEGKMVAEMKAVGVRHKGYGNKHIKAEYFEPLGASLLSAMEHRIGG 120 (147)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHGGGSTTSCCCGGGHHHHHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHHHHHHhcc
Confidence 45799999999999999999999876443 333331 1222 2377888888888888877776653
No 281
>1out_B Hemoglobin I; heme, oxygen transport, respiratory protein, erythrocyte; HET: HEM; 2.30A {Oncorhynchus mykiss} SCOP: a.1.1.2 PDB: 1ouu_B*
Probab=35.54 E-value=21 Score=27.51 Aligned_cols=64 Identities=11% Similarity=0.150 Sum_probs=46.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
++++.+|+.+|+.++.-+..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+..
T Consensus 54 l~~n~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~k~~V~p~~f~~~~~~Ll~~l~~~lg~ 120 (146)
T 1out_B 54 IMGNPKVAAHGKVVCGALDKAVKNMGN--ILATYKSLSETHANKLFVDPDNFRVLADVLTIVIAAKFGA 120 (146)
T ss_dssp HHHCHHHHHHHHHHHHTHHHHHHTTTC--HHHHTHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHHHHGG
T ss_pred hccCHHHHHHHHHHHHHHHHHHHhHhh--HHHHHHHHHHHHhHhcCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 346789999999999999999999988 33333331 2222 3467788888888888777775543
No 282
>1v4x_B Hemoglobin beta chain; oxygen transport, heme, respiratory protein, erythrocyte, ROOT effect, SWIM bladder, oxygen storage/transport complex; HET: HEM; 1.60A {Thunnus thynnus} SCOP: a.1.1.2 PDB: 1v4u_B* 1v4w_B*
Probab=35.28 E-value=22 Score=27.41 Aligned_cols=64 Identities=8% Similarity=0.159 Sum_probs=46.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
++++.+|+.+|+.++.-+..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+..
T Consensus 54 l~~s~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~ll~~l~~~lg~ 120 (146)
T 1v4x_B 54 IKGNAKIAAHGVKVLHGLDRAVKNMDN--INEAYSELSVLHSDKLHVDPDNFRILGDCLTVVIAANLGD 120 (146)
T ss_dssp HHTCHHHHHHHHHHHHTTHHHHHCTTC--HHHHTHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHHHHGG
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHhHhcCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 446789999999999999999999987 33333331 2222 3467788888888888877775543
No 283
>2r80_A Hemoglobin subunit alpha-A; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3mju_A* 3dhr_A* 3mjp_A* 1faw_A* 3eok_A* 3k8b_A* 2qmb_A* 3fs4_A* 3a59_A* 1a4f_A* 1hv4_A* 2zfb_A* 1c40_A* 3at5_A* 3at6_A*
Probab=35.26 E-value=54 Score=24.94 Aligned_cols=60 Identities=13% Similarity=0.093 Sum_probs=42.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYL 79 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~ 79 (297)
++.+|+.+++.++.-|..+.++|++. .+.++.- .... .-.+++.|..+.+-++..+.+.+
T Consensus 51 ~s~~~~~h~~~v~~al~~~v~~ld~l--~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~l 113 (141)
T 2r80_A 51 GSAQIKGHGKKVAEALVEAANHIDDI--AGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVHF 113 (141)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTCH--HHHTHHHHHHHHTTSCCCTHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHc
Confidence 67899999999999999999999872 2333321 2222 45677888887777777666533
No 284
>2bk9_A CG9734-PA; oxygen transport, drosophila melanogaster hemoglobin, heme hexacoordination, insect hemoglobin, protein cavities; HET: HEM CXS; 1.2A {Drosophila melanogaster} PDB: 2g3h_A*
Probab=34.94 E-value=41 Score=25.92 Aligned_cols=63 Identities=6% Similarity=0.037 Sum_probs=42.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhh---hhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHH
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENI---RDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNY 78 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~---~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~ 78 (297)
+++..+|+.+|+.++..+..+.++| .+...+ +.++.- .....-.+++.|..+.+-++..+.+.
T Consensus 52 l~~~~~~~~h~~~v~~~l~~~v~~l~~~dd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~~l~~~ 120 (153)
T 2bk9_A 52 LSGNARFRAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKIAVSHIPRTVSKESYNQLKGVILDVLTAA 120 (153)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999 443222 233221 11222467788887777777666653
No 285
>2aa1_B Hemoglobin beta-C chain; ROOT effect, cooperativity, antarctic FISH, oxygen storage/transport complex; HET: HEM; 1.80A {Trematomus newnesi} SCOP: a.1.1.2 PDB: 1xq5_B* 3bj1_B* 3bj2_B* 3bj3_B*
Probab=34.75 E-value=17 Score=28.13 Aligned_cols=64 Identities=13% Similarity=0.180 Sum_probs=46.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
++++.+|+.+|+.++.-+..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+..
T Consensus 54 l~~~~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~lg~ 120 (146)
T 2aa1_B 54 IAQNAMVSKHGTTILNGLDRAVKNMDD--ITNTYAELSVLHSEKLHVDPDNFKLLADCLTIVVAARFGS 120 (146)
T ss_dssp HHHCHHHHHHHHHHHHTTHHHHHCTTC--HHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHGG
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHhHHh--HHHHHHHHHHHHhHhcCCCHHHHHHHHHHHHHHHHHHccc
Confidence 345689999999999999999999988 33443331 2222 4567788888888888877775543
No 286
>1a6m_A Myoglobin; heme protein, model compounds, oxygen storage, ligand binding geometry, conformational substates, oxygen transpor; HET: HEM; 1.00A {Physeter catodon} SCOP: a.1.1.2 PDB: 1a6k_A* 1a6n_A* 2jho_A* 1ufp_A* 2eb9_A* 2eb8_A* 2w6w_A* 2ekt_A* 105m_A* 104m_A* 1ajh_A* 1ajg_A* 1bvc_A* 1bvd_A* 1bz6_A* 1bzr_A* 1cq2_A* 1duk_A* 1ebc_A* 1hjt_A* ...
Probab=34.74 E-value=21 Score=27.69 Aligned_cols=61 Identities=7% Similarity=0.046 Sum_probs=43.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYL 79 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~ 79 (297)
+++.+|+.+|+.++.-|..+.++|++.. +.++.- .... .-.+++.|..+.+-++..+.+.+
T Consensus 56 ~~~~~~~~h~~~v~~al~~~v~~ld~~~--~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~l 119 (151)
T 1a6m_A 56 KASEDLKKHGVTVLTALGAILKKKGHHE--AELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRH 119 (151)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTTTTCCH--HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHccCCHH--HHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHc
Confidence 4789999999999999999999998743 333221 1222 34677888877777777666543
No 287
>1xq5_A Hemoglobin alpha-1 chain; FISH hemoglobin, rapid oxidation, structural genomics, protein structure initiative, PSI, CESG; HET: HEM; 1.90A {Perca flavescens} SCOP: a.1.1.2 PDB: 3bj1_A* 3bj2_A* 3bj3_A* 3bcq_A*
Probab=34.47 E-value=52 Score=25.07 Aligned_cols=61 Identities=10% Similarity=0.148 Sum_probs=43.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
++.+|+.+++.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+.
T Consensus 53 ~n~~~~~h~~~v~~al~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~ll~~l~~~lg 116 (143)
T 1xq5_A 53 GSAPVNKHGKTIMGGIVDAVASIDD--LNAGLLALSELHAFTLRVDPANFKILSHCILVLLAVKFP 116 (143)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHTTTC--HHHHTHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHCG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHhh--HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhh
Confidence 6899999999999999999999987 22333321 1222 346778888877777777766443
No 288
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=34.18 E-value=96 Score=20.15 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=30.1
Q ss_pred ceEEEecCCCcchHH--HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccEE
Q psy1678 240 NLVGYCSDQAHSSVE--RAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 240 ~~~i~~s~~aH~Si~--Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~ 296 (297)
++++|.+...++|-. +...-.|+....+.++.+ ..+.+.+.+....+.+|.+
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~i~~~~~~i~~~-----~~~~~~~~~~~~~~~vP~l 55 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGN-----AAKREEMIKRSGRTTVPQI 55 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTCCCEEEECTTC-----SHHHHHHHHHHSSCCSCEE
T ss_pred cEEEEECCCChhHHHHHHHHHHCCCCcEEEECCCC-----HHHHHHHHHHhCCCCcCEE
Confidence 467787777766642 222335788888888753 1233344444445667764
No 289
>1q1f_A Neuroglobin; globin fold, heme protein, oxygen storage/transport complex; HET: HEM; 1.50A {Mus musculus} SCOP: a.1.1.2 PDB: 1w92_A* 3gk9_A* 2vry_A* 3gkt_A* 3gln_A* 1oj6_A*
Probab=33.63 E-value=36 Score=25.97 Aligned_cols=66 Identities=12% Similarity=0.063 Sum_probs=43.2
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhcc-c-cCCCCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 15 IMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFS-Q-MGSNIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 15 ~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p-~-l~~~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
..+.+.+|+.+|+.++..|..+.+++++...+ +.++. | .....-.+++.|..+.+-++..+.+.+.
T Consensus 54 ~~~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~l~~~H~~~gV~p~~f~~~~~~ll~~l~~~lg 122 (151)
T 1q1f_A 54 DSLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEEYLTSLGRKHRAVGVRLSSFSTVGESLLYMLEKSLG 122 (151)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTSSCSSSSHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHG
T ss_pred HHhhChHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 34577889999999999999999999874332 22222 1 1111234567777777777776666554
No 290
>2b3t_B RF-1, peptide chain release factor 1; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: e.38.1.1
Probab=33.46 E-value=75 Score=28.73 Aligned_cols=69 Identities=12% Similarity=0.058 Sum_probs=39.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhCCCCC-------CcCCCCceEEEecCCCcchHHHHHHhcCC-ceEEeeC-CCCCC
Q psy1678 204 GTASEATLVALLGAKAKTMQRVKEAHPDWK-------DSDIIANLVGYCSDQAHSSVERAGLLGGV-TIRGLPA-DDSYK 274 (297)
Q Consensus 204 sGGT~anl~Al~~AR~~~~~~~~~~~~~~~-------~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~-~v~~Vp~-d~~~~ 274 (297)
.||+||.+.|-.+.|-+..- ....||.+. +.++.+..++-++...=|+..| .--|+ .|++||. +..||
T Consensus 119 aGG~Ea~~fa~~L~rMY~r~-ae~~g~k~ev~~~~~~~~gG~k~~~~~i~G~~ayg~Lk--~E~GvHRvqRvp~~es~gR 195 (360)
T 2b3t_B 119 TGGDEAALFAGDLFRMYSRY-AEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLK--FESGGHRVQRVPATESQGR 195 (360)
T ss_dssp SSSHHHHHHHHHHHHHHHHH-HHHTTCCCCEEEEEECTTSSEEEEEEEECSSSCHHHHG--GGCEEEEEEECCTTCSSCC
T ss_pred CCcHHHHHHHHHHHHHHHHH-HHHcCCeEEEEecCCCCCCCceEEEEEEEcccHHHHHH--hccCeEEEEecCCCcccCc
Confidence 69999999988887654321 111355432 1233455555555444444433 34576 7888885 45666
Q ss_pred c
Q psy1678 275 L 275 (297)
Q Consensus 275 m 275 (297)
+
T Consensus 196 ~ 196 (360)
T 2b3t_B 196 I 196 (360)
T ss_dssp C
T ss_pred C
Confidence 4
No 291
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=33.08 E-value=2.3e+02 Score=26.21 Aligned_cols=122 Identities=11% Similarity=0.086 Sum_probs=81.2
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhhc--chhhhhccc--------cCCCCCCChHHHHHHHHHHHHHHHHHHHhcCC
Q psy1678 15 IMGDVNEFKDFAKAMVDYVGNYLENIRDR--YVQLQRFSQ--------MGSNIMGDVNEFKDFAKAMVDYVGNYLENIRD 84 (297)
Q Consensus 15 ~~~~~~~f~~~~~~~vd~i~~y~~~~~~~--~v~~~v~p~--------l~~~~p~~~e~f~~~l~~v~d~i~~~~~~~~~ 84 (297)
..-+.++||+++++|+|+|+||++++.++ +|++.++|+ ++...|..++.+.++++++.+.+. .
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~--- 89 (511)
T 3vp6_A 17 AKNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLK----Y--- 89 (511)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHH----T---
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhh----c---
Confidence 34678999999999999999999999876 477888885 466778888888888887655432 1
Q ss_pred CCCCCCCChhhhhccCCCCCCCCCCCHHHHHHHHHH-HHcCCCCCCCCccccccCCCC--CCHHHHHHHHHHHhcccc
Q psy1678 85 RRVLPTVEPGYLRPLIPETAPDTPDTWQEVMSDIER-VIMPGVTHWHSPKFHAYFPTA--NSYPAIVADILSDSIACI 159 (297)
Q Consensus 85 ~pv~~~~~p~~l~~~~~~~lP~~g~~~~~il~~l~~-~~~~~~~~~~~p~~~g~~~s~--~~~~svl~d~l~~~lN~n 159 (297)
. ..+.+|.++ ..++.. .+...++.++.. .+.. ..++|..++ ......+.+|++..++..
T Consensus 90 -~-~~~~~p~f~-~~~~~~-----~~~~~~~~e~l~~~~~~--------~~~~~~~~p~~~~le~~~~~~l~~~~g~~ 151 (511)
T 3vp6_A 90 -G-VRTGHPRFF-NQLSTG-----LDIIGLAGEWLTSTANT--------NMFTYEIAPVFVLMEQITLKKMREIVGWS 151 (511)
T ss_dssp -S-CCTTSTTEE-SSSSCC-----CCHHHHHHHHHHHHHCC--------CSSCTTTCHHHHHHHHHHHHHHHHHHTCC
T ss_pred -c-CCCCCCCce-EeecCC-----CcHHHHHHHHHHHHhcc--------CCCCcccCchHHHHHHHHHHHHHHHhCCC
Confidence 1 234567766 333322 355666655544 3221 123344333 234567788999988765
No 292
>2w72_B Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7w_B* 1qi8_B* 1j7y_B* 1dxu_B* 1a0u_B* 1a0z_B* 1gli_B* 1j7s_B* 1o1l_B* 1o1n_B* 1y0t_B* 1y0w_B* 1o1o_B* 1ye2_B* 1y35_B* 1y22_B* 1ye0_B* 1dxt_B* 1y5f_B* 1ird_B* ...
Probab=32.71 E-value=25 Score=27.06 Aligned_cols=62 Identities=10% Similarity=0.119 Sum_probs=45.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
+++.+|+.+++.++.-|..+.+++++ +.+.++.- .... .-.+++.|..+.+-++..+.+.+.
T Consensus 55 ~~n~~~~~h~~~v~~~l~~~v~~ld~--l~~~l~~L~~~H~~k~~V~p~~f~~~~~~Ll~~l~~~lg 119 (146)
T 2w72_B 55 MGNPKVKAQGKKVLGAFSDGLAHLDN--LKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFG 119 (146)
T ss_dssp HHCHHHHHHHHHHHHHHHHHTTCTTC--HHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHG
T ss_pred ccCHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHHHHHcc
Confidence 46788999999999999999999987 33333331 2222 346778888888888777777654
No 293
>1jeb_A Hemoglobin zeta chain; oxygen transport, oxygen storage/transport complex; HET: HEM; 2.10A {Homo sapiens} SCOP: a.1.1.2
Probab=32.44 E-value=48 Score=25.11 Aligned_cols=59 Identities=14% Similarity=0.181 Sum_probs=40.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNY 78 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~ 78 (297)
++.+|+.+++.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.
T Consensus 52 ~s~~~~~h~~~v~~~l~~~v~~ld~--l~~~l~~L~~~H~~k~~V~p~~f~~~~~~ll~~l~~~ 113 (142)
T 1jeb_A 52 GSAQLRAHGSKVVAAVGDAVKSIDD--IGGALSKLSELHAYILRVDPVNFKLLSHCLLVTLAAR 113 (142)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTC--HHHHTHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHhh--HHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999987 22222221 1112 3466788887777776666653
No 294
>2r80_B Hemoglobin subunit beta; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3dhr_B* 3mju_B* 1faw_B* 3k8b_B* 2qmb_B* 3eok_B* 1a4f_B* 1c40_B* 1hv4_B* 2zfb_B* 3mjp_B* 1hbr_B* 3fs4_B* 3a59_B* 1wmu_B* 1v75_B* 2z6n_B* 3at5_B* 3at6_B*
Probab=32.35 E-value=31 Score=26.43 Aligned_cols=63 Identities=11% Similarity=0.190 Sum_probs=44.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
+++.+|+.+++.++.-|..+.++|++ ..+.++.- .... .-.+++.|..+.+-++..+.+.+..
T Consensus 55 ~~n~~~~~h~~~v~~~l~~~v~~ld~--l~~~l~~L~~~H~~~~~V~p~~f~~~~~~ll~~l~~~lg~ 120 (146)
T 2r80_B 55 SGNPNVKAHGKKVLTSFGDAVKNLDN--IKGTFAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGK 120 (146)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHTTTC--HHHHTHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHGG
T ss_pred hcCHHHHHHHHHHHHHHHHHHHhHhh--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHccc
Confidence 46789999999999999999999987 22333221 1222 3467788888888887777776553
No 295
>1lhs_A Myoglobin; oxygen storage; HET: HEM; 2.00A {Caretta caretta} SCOP: a.1.1.2 PDB: 1lht_A*
Probab=32.18 E-value=28 Score=27.01 Aligned_cols=60 Identities=10% Similarity=0.082 Sum_probs=42.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNY 78 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~ 78 (297)
+++.+|+.+++.++.-|..+.++|++.. +.++.- .... .-.+++.|..+.+-++..+.+.
T Consensus 56 ~~n~~~~~h~~~v~~al~~~v~~ldd~~--~~l~~L~~~H~~k~~V~p~~f~~~~~~Ll~~l~~~ 118 (153)
T 1lhs_A 56 KSSEEVKKHGTTVLTALGRILKQKNNHE--QELKPLAESHATKHKIPVKYLEFICEIIVKVIAEK 118 (153)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTTTTCCH--HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhccCHH--HHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999998743 333321 2222 3467788887777777666653
No 296
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=31.39 E-value=1.5e+02 Score=25.79 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=24.5
Q ss_pred ceEEEecCCCcchHHHHHHhcCCceEEeeCCC
Q psy1678 240 NLVGYCSDQAHSSVERAGLLGGVTIRGLPADD 271 (297)
Q Consensus 240 ~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d~ 271 (297)
+.+|++++.+-..-.+..+.+|.+|+.++.+.
T Consensus 98 ~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~ 129 (325)
T 3dwg_A 98 RLICVMPENTSVERRQLLELYGAQIIFSAAEG 129 (325)
T ss_dssp EEEEEEESSSCHHHHHHHHHHTCEEEEECSTT
T ss_pred cEEEEECCCCCHHHHHHHHHCCCEEEEECCCC
Confidence 56788888766566667788999999998653
No 297
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=31.11 E-value=54 Score=29.32 Aligned_cols=38 Identities=11% Similarity=0.265 Sum_probs=29.8
Q ss_pred hcCCceEEeeCC-------CCCCcCH---HHHHHHHHHHHHCCCccEE
Q psy1678 259 LGGVTIRGLPAD-------DSYKLRG---DALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 259 ~lg~~v~~Vp~d-------~~~~md~---~~L~~~i~~~~~~G~~Pf~ 296 (297)
-+|++++|||+. ..+.+|. +.|++.|+.+.++|..+++
T Consensus 72 ~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vil 119 (380)
T 1edg_A 72 QKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVIL 119 (380)
T ss_dssp HHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 469999999973 3566774 6678899999999987764
No 298
>1zzp_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; four helix bundle, nuclear export signal, transferase; NMR {Homo sapiens}
Probab=30.95 E-value=74 Score=23.95 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=32.8
Q ss_pred HHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1678 5 IHKKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDR 43 (297)
Q Consensus 5 ~~~~~~~~~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~ 43 (297)
++-++.+++--+-...+..+.||...||-.-|.+.|.+-
T Consensus 37 l~~a~a~~s~~~~~~s~~ld~g~~L~~yC~~yvd~i~Q~ 75 (130)
T 1zzp_A 37 LCLAISRNSEQMASHSAVLEAGKNLYSFCVSYVDSIQQM 75 (130)
T ss_dssp HHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHGGGCSCS
T ss_pred hhHHHHhhccCCCCchHHHHhHHHHHHhccccccchHHH
Confidence 456778888666788888999999999999999999763
No 299
>2izx_A CAMP-dependent protein kinase type II-alpha regulatory subunit; CAMP-binding, phosphorylation, nucleotide-binding, PKA, CAMP, anchor, kinase, acetylation; 1.3A {Homo sapiens} PDB: 2hwn_A
Probab=30.88 E-value=11 Score=22.49 Aligned_cols=21 Identities=14% Similarity=0.504 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhc
Q psy1678 23 KDFAKAMVDYVGNYLENIRDR 43 (297)
Q Consensus 23 ~~~~~~~vd~i~~y~~~~~~~ 43 (297)
|++-...++|.++|++.+.+.
T Consensus 20 ~~qP~di~~f~a~yF~~l~~~ 40 (41)
T 2izx_A 20 RQQPPDLVEFAVEYFTRLREA 40 (41)
T ss_dssp HHCCSCHHHHHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHhhC
Confidence 444456799999999988763
No 300
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=30.56 E-value=1.3e+02 Score=27.54 Aligned_cols=73 Identities=11% Similarity=-0.082 Sum_probs=40.5
Q ss_pred CeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceE-EeeC--CCCCCc
Q psy1678 199 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIR-GLPA--DDSYKL 275 (297)
Q Consensus 199 ~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~-~Vp~--d~~~~m 275 (297)
..+-|.|||.+...|+......... +.-.|++++-+=.+-.......|...+ ..+. ++++.+
T Consensus 111 ~~~qt~ggtga~~~a~~~l~~~~~~---------------pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~ 175 (420)
T 4h51_A 111 VAVQTLSGTGAVSLGAKLLTRVFDA---------------ETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSL 175 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTTSCT---------------TTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEE
T ss_pred ceeeecCchHHHHHHHHHHHHhcCC---------------CCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCC
Confidence 3566899999988887765332211 111345555554455555666676433 2222 234566
Q ss_pred CHHHHHHHHHH
Q psy1678 276 RGDALEAAIEE 286 (297)
Q Consensus 276 d~~~L~~~i~~ 286 (297)
|.+.+.+.+..
T Consensus 176 d~~~~~~~l~~ 186 (420)
T 4h51_A 176 NFEGMKKDILA 186 (420)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHhc
Confidence 66666666654
No 301
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=30.56 E-value=76 Score=27.43 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=30.6
Q ss_pred HhcCCceEEeeCC--------CCCCcC---HHHHHHHHHHHHHCCCccEE
Q psy1678 258 LLGGVTIRGLPAD--------DSYKLR---GDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 258 ~~lg~~v~~Vp~d--------~~~~md---~~~L~~~i~~~~~~G~~Pf~ 296 (297)
+-+|++.++||+. ..+.+| .+.|.+.|+.+.++|..+++
T Consensus 51 ~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vil 100 (320)
T 3nco_A 51 KERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVII 100 (320)
T ss_dssp HHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3469999999862 357788 57788999999999987764
No 302
>1bin_A Leghemoglobin A; heme, nitrogen fixation, multigene family, oxygen transport; HET: HEM; 2.20A {Glycine max} SCOP: a.1.1.2 PDB: 1fsl_A*
Probab=30.43 E-value=1.7e+02 Score=21.70 Aligned_cols=64 Identities=6% Similarity=0.014 Sum_probs=45.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc-cCCCCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ-MGSNIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~-l~~~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
.+..+|+.+++.++..+..+.+++.+...+ ..+.=| .....-.+++.|....+.++..+.+.+.
T Consensus 53 ~~~~~~~~h~~~v~~~l~~~v~~ld~~~~~~~~~~l~~~H~~~gv~p~~f~~~~~~Ll~~l~~~lg 118 (143)
T 1bin_A 53 PTNPKLTGHAEKLFALVRDSAGQLKASGTVVADAALGSVHAQKAVTDPQFVVVKEALLKTIKAAVG 118 (143)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHG
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhc
Confidence 478889999999999999998888875533 112222 1223457888898888888887777554
No 303
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=30.42 E-value=75 Score=27.36 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=29.5
Q ss_pred cCCceEEeeCC--------CCCCcCHH---HHHHHHHHHHHCCCccEE
Q psy1678 260 GGVTIRGLPAD--------DSYKLRGD---ALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 260 lg~~v~~Vp~d--------~~~~md~~---~L~~~i~~~~~~G~~Pf~ 296 (297)
+|++++++|+. ..+.+|.+ .|++.|+.+.++|..|++
T Consensus 43 ~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vil 90 (305)
T 1h1n_A 43 KGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVV 90 (305)
T ss_dssp TTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 79999999972 35777754 578899999999988764
No 304
>1sct_A Hemoglobin II (carbonmonoxy) (alpha chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=30.05 E-value=33 Score=26.37 Aligned_cols=64 Identities=9% Similarity=0.052 Sum_probs=44.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
+++.+|+.+++.++.-|..+.++|++...+ +.++.- .....-.+++.|..+.+-++..+.+.+.
T Consensus 62 ~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~~lg 128 (150)
T 1sct_A 62 KANSKLRGHAITLTYALNNFVDSLDDPSRLKCVVEKFAVNHINRKISGDAFGAIVEPMKETLKARMG 128 (150)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCCHHHHGGGHHHHHHHHHHHHG
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhc
Confidence 688999999999999999999999874433 222221 1111345677777777777777766554
No 305
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 3ag0_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=29.80 E-value=61 Score=26.21 Aligned_cols=65 Identities=12% Similarity=0.084 Sum_probs=45.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCC-CCCCChHHHHHHHHHHHHHHHHHHH
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGS-NIMGDVNEFKDFAKAMVDYVGNYLE 80 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~-~~p~~~e~f~~~l~~v~d~i~~~~~ 80 (297)
+++..+|+.+++.++..|..+.++|++...+ +.++.- ... ..-.+++.|..+.+-++..+.+.+.
T Consensus 75 l~~n~~~~~h~~~v~~al~~~v~~Ldd~~~l~~~l~~L~~~H~~~~gV~p~~f~~~~~~Ll~~l~~~lg 143 (193)
T 2dc3_A 75 MERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEFA 143 (193)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTG
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhh
Confidence 4578999999999999999999999874432 333221 122 3456778888777777776666443
No 306
>3mkb_A Hemoglobin subunit alpha; oxygen affinity, shortfin MAK storage, oxygen transport; HET: HEM; 1.90A {Isurus oxyrinchus} SCOP: a.1.1.2 PDB: 1gcv_A* 1gcw_A*
Probab=29.39 E-value=64 Score=24.68 Aligned_cols=58 Identities=9% Similarity=0.049 Sum_probs=41.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCC-CCCCChHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGS-NIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~-~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.+.+|+.+|++++.-|.+|.++|++.. +.++.- ... ..-.+++.|..+.+-++..+..
T Consensus 51 ~s~~~~aHg~~v~~al~~~v~~ld~l~--~~l~~L~~~H~~~l~V~p~~f~~l~~~Ll~~l~~ 111 (140)
T 3mkb_A 51 AGAKVQLHGGKVIRAVVSAAEHDDDLH--AHLMVLAVTHGKKLLVDPSNFPMLSECILVTLAT 111 (140)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTTTTTHH--HHTHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHChhhHH--HHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999998722 233221 222 3456777888777777666665
No 307
>2oif_A Horvu GLB1, non-legume hemoglobin; hexacoordinate hemoglobin, barley, ligand binding, non- symbiotic, symbiotic, evolution; HET: HEM; 1.80A {Hordeum vulgare} PDB: 2r50_A* 1d8u_A* 2gnv_A* 2gnw_A* 3qqq_A* 3qqr_A*
Probab=29.14 E-value=65 Score=24.83 Aligned_cols=63 Identities=10% Similarity=-0.057 Sum_probs=44.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh----hhhccc--cCCCCCCChHHHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ----LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGNYL 79 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~----~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~~~ 79 (297)
.+...|+.+++.++..|..+..++++...+ +.++.- .....-.+++.|......++..+.+.+
T Consensus 62 ~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~~~~l~~Lg~~H~~~gV~p~~f~~~~~~Ll~~l~~~l 130 (162)
T 2oif_A 62 ETNPKLKTHAVSVFVMTCEAAAQLRKAGKITVRETTLKRLGGTHLKYGVADGHFEVTRFALLETIKEAL 130 (162)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHTHHHHTSCCCSSSCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHS
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHcCCHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHc
Confidence 477889999999999999999999874444 343331 111134677888888777777776644
No 308
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=29.04 E-value=52 Score=25.18 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=25.8
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy1678 12 GSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRY 44 (297)
Q Consensus 12 ~~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~ 44 (297)
+.+.-|+-.+|.+.+.+.++-|.++++.+.+.+
T Consensus 4 ~~~~~m~e~ef~~lad~~L~~ie~~le~~~d~~ 36 (129)
T 3t3l_A 4 GHPGSLDETTYERLAEETLDSLAEFFEDLADKP 36 (129)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 456789999999999999999999999987653
No 309
>4hrt_B Hemoglobin B chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_B*
Probab=28.90 E-value=94 Score=23.80 Aligned_cols=64 Identities=11% Similarity=0.117 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhcc-c-cCCCCCCChHHHHHHHHHHHHHHHHHHHh
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFS-Q-MGSNIMGDVNEFKDFAKAMVDYVGNYLEN 81 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p-~-l~~~~p~~~e~f~~~l~~v~d~i~~~~~~ 81 (297)
+..+|+.+|+.++.-|..+.++|++...+ +.++- | .....-..++.|..+.+-++..+.+.+..
T Consensus 65 ~~~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~~l~~~lg~ 131 (152)
T 4hrt_B 65 DNSKLRGHSITLMYALQNFVDALDDVERLKCVVEKFAVNHINRQISADEFGEIVGPLRQTLKARMGN 131 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHC-CCCHHHHGGGHHHHHHHHHHHHGG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 78899999999999999999999874432 22221 1 12233466777877777777777766543
No 310
>2nrl_A Myoglobin; transport protein; HET: HEM; 0.91A {Thunnus atlanticus} PDB: 2nx0_A* 3qm5_A* 3qm6_A* 3qm7_A* 3qm8_A* 3qm9_A* 3qma_A* 1myt_A* 2nrm_A*
Probab=28.43 E-value=62 Score=24.73 Aligned_cols=61 Identities=10% Similarity=0.087 Sum_probs=42.8
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHH
Q psy1678 16 MGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNY 78 (297)
Q Consensus 16 ~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~ 78 (297)
.+++.+|+.+++.++.-|..+.++|++.. +.++.- .... .-.+++.|..+.+-++..+.+.
T Consensus 51 l~~n~~~~~h~~~v~~al~~~v~~ldd~~--~~l~~L~~~H~~k~~V~p~~f~~~~~~Ll~~l~~~ 114 (147)
T 2nrl_A 51 IAGNAAVSAHGATVLKKLGELLKAKGSHA--AILKPLANSHATKHKIPINNFKLISEVLVKVMQEK 114 (147)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHCSSCHH--HHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 56889999999999999999999998743 222221 1121 3467788887777777666653
No 311
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=27.89 E-value=2.7e+02 Score=24.09 Aligned_cols=85 Identities=13% Similarity=0.152 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
..++.. +.-+++-+|..-.-...+...--++|.||. -+||.+|+-+... | ....++++++|...
T Consensus 70 ~~L~~~-f~~la~~~~m~~~l~~~~~~~ri~vl~Sg~-g~~l~~ll~~~~~--------g------~l~~~i~~Visn~~ 133 (292)
T 3lou_A 70 DALRRE-FEPIAERFRMQWAIHDVAARPKVLIMVSKL-EHCLADLLFRWKM--------G------ELKMDIVGIVSNHP 133 (292)
T ss_dssp HHHHHH-HHHHHHHHTCEEEEEETTSCCEEEEEECSC-CHHHHHHHHHHHH--------T------SSCCEEEEEEESSS
T ss_pred HHHHHH-HHHHHHhcCcEEEeeccCCCCEEEEEEcCC-CcCHHHHHHHHHc--------C------CCCcEEEEEEeCcH
Confidence 345543 345677777642211111122347787765 4799999876332 1 11246777777543
Q ss_pred cchHHHHHHhcCCceEEeeCCCC
Q psy1678 250 HSSVERAGLLGGVTIRGLPADDS 272 (297)
Q Consensus 250 H~Si~Kaa~~lg~~v~~Vp~d~~ 272 (297)
....-|.-.|+.+..+|....
T Consensus 134 --~~~~~A~~~gIp~~~~~~~~~ 154 (292)
T 3lou_A 134 --DFAPLAAQHGLPFRHFPITAD 154 (292)
T ss_dssp --TTHHHHHHTTCCEEECCCCSS
T ss_pred --HHHHHHHHcCCCEEEeCCCcC
Confidence 344557778999998887643
No 312
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=27.55 E-value=64 Score=28.85 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=30.8
Q ss_pred HhcCCceEEeeCC------CCCCcC---HHHHHHHHHHHHHCCCccEE
Q psy1678 258 LLGGVTIRGLPAD------DSYKLR---GDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 258 ~~lg~~v~~Vp~d------~~~~md---~~~L~~~i~~~~~~G~~Pf~ 296 (297)
+-+|+++++||+. .++.+| .+.|++.|+.+.++|..|++
T Consensus 62 k~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~Gi~vIl 109 (353)
T 3l55_A 62 MQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAGLYAIV 109 (353)
T ss_dssp HHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3469999999984 457788 45668889999999987764
No 313
>2wtg_A Globin-like protein; metal-binding, oxygen transport; HET: HEM; 1.50A {Caenorhabditis elegans} PDB: 2wth_A*
Probab=27.46 E-value=74 Score=25.02 Aligned_cols=62 Identities=13% Similarity=0.106 Sum_probs=42.6
Q ss_pred HHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhc
Q psy1678 4 QIHKKIKNGSIIMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQMGSNIMGDVNEFKDFAKAMVDYVGNYLENI 82 (297)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~l~~~~p~~~e~f~~~l~~v~d~i~~~~~~~ 82 (297)
.+++--.+|....+.+++|...+..++.++.+++. . .+...+.|.+++..+.+.|..+++++
T Consensus 93 ~l~~L~~~H~~~gV~~ehy~~v~~~Ll~~L~~~l~------~-----------t~~~~~AW~~~~~~i~~~i~~~~~~~ 154 (159)
T 2wtg_A 93 YVRETINRHRIYKMDPALWMAFFTVFTGYLESVGS------L-----------NDQQKAAWMALGKEFNAESQTHLKNS 154 (159)
T ss_dssp HHHHHHHHHGGGCCCTTHHHHHHHHHHHHHTTTSC------C-----------CHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHcCCCHHHHHHHHHHHHHHHHHHcC------C-----------CHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45555556666667778888888777777755541 1 12234788889999999999888764
No 314
>3lb2_A Dehaloperoxidase A; globin, oxidoreductase; HET: HEM; 1.06A {Amphitrite ornata} SCOP: a.1.1.2 PDB: 1ewa_A* 1ew6_A* 2qfk_A* 3kun_A* 3lb1_A* 3dr9_A* 3lb3_A* 3lb4_A* 3mou_A* 3ord_A* 3mym_A* 3k3u_A* 3o7n_A* 3kuo_A* 2qfn_A* 3myn_A* 3oj1_A* 3ok5_A* 3ixf_A*
Probab=27.32 E-value=1.5e+02 Score=22.43 Aligned_cols=62 Identities=13% Similarity=0.186 Sum_probs=42.1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHH
Q psy1678 15 IMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVG 76 (297)
Q Consensus 15 ~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~ 76 (297)
.++++.+|+.+|+.++.-+.+..+++++-.++ +.+... .....-.+++.|+.+..-++..+.
T Consensus 45 ~l~~n~~~~aHg~kV~~al~~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~F~~l~~~ll~~L~ 109 (137)
T 3lb2_A 45 ELKSMAKFGDHTEKVFNLMMEVADRATDCVPLASDANTLVQMKQHSSLTTGNFEKLFVALVEYMR 109 (137)
T ss_dssp -CTTSHHHHHHHHHHHHHHHHHHHHCBTTBCCHHHHHHHHHCGGGTTCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 35778999999999999999999999875433 222221 222223778888876666555444
No 315
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=26.71 E-value=2.5e+02 Score=24.53 Aligned_cols=84 Identities=8% Similarity=0.080 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
..++.. +.-+++-+|..-.-...+...--++|.||. -+||.+|+-+... | ....++++++|..
T Consensus 80 ~~L~~~-l~~la~~l~m~~~l~~~~~~~ri~vl~Sg~-g~nl~~ll~~~~~--------g------~l~~~I~~Visn~- 142 (302)
T 3o1l_A 80 DGFREA-FTPIAEEFSMDWRITDSAQKKRVVLMASRE-SHCLADLLHRWHS--------D------ELDCDIACVISNH- 142 (302)
T ss_dssp HHHHHH-HHHHHHHHTCEEEEEETTSCCEEEEEECSC-CHHHHHHHHHHHT--------T------CSCSEEEEEEESS-
T ss_pred HHHHHH-HHHHHHHhCCeeeecccCCCcEEEEEEeCC-chhHHHHHHHHHC--------C------CCCcEEEEEEECc-
Confidence 345543 356677777642211111122347777765 4799999876321 1 1124677777744
Q ss_pred cchHHHHHHhcCCceEEeeCCC
Q psy1678 250 HSSVERAGLLGGVTIRGLPADD 271 (297)
Q Consensus 250 H~Si~Kaa~~lg~~v~~Vp~d~ 271 (297)
..+.+-|.-.|+.+..+|.+.
T Consensus 143 -~~~~~~A~~~gIp~~~~~~~~ 163 (302)
T 3o1l_A 143 -QDLRSMVEWHDIPYYHVPVDP 163 (302)
T ss_dssp -STTHHHHHTTTCCEEECCCCS
T ss_pred -HHHHHHHHHcCCCEEEcCCCc
Confidence 345566778899998888754
No 316
>3pt8_A Hemoglobin II; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} SCOP: a.1.1.0 PDB: 3pi1_A* 2olp_A* 3pi3_A* 3pi4_A* 3pt7_A* 3pi2_A*
Probab=26.66 E-value=80 Score=24.11 Aligned_cols=61 Identities=8% Similarity=0.178 Sum_probs=41.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhcc-c-cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFS-Q-MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p-~-l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
.+..+|+.+++.++..|..+.+++++...+ +.++. | .....-..++.|..+.+-++..+.+
T Consensus 58 ~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~ 121 (152)
T 3pt8_A 58 QDNPKMKAQSLVFCNGMSSFVDHLDDNDMLVVLIQKMAKLHNNRGIRASDLRTAYDILIHYMED 121 (152)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 567799999999999999999999875432 33322 1 1122356778888777776665554
No 317
>3pt8_B Hemoglobin III; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} PDB: 3pt7_B*
Probab=26.38 E-value=71 Score=24.40 Aligned_cols=61 Identities=13% Similarity=0.180 Sum_probs=41.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
+++.+|+.+++.++..|..+.+++++...+ +.++.- .....-..++.|..+.+.++..+.+
T Consensus 58 ~~n~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~ 121 (152)
T 3pt8_B 58 TNHPTMKAQSLVFCNGMSSFVDNLDDHEVLVVLLQKMAKLHFNRGIRIKELRDGYGTLLRYLED 121 (152)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 466789999999999999999999875422 333221 1123346778888777776666665
No 318
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=26.22 E-value=1.5e+02 Score=19.84 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=33.0
Q ss_pred CceEEEecCCCcchHH--HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccEE
Q psy1678 239 ANLVGYCSDQAHSSVE--RAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 239 ~~~~i~~s~~aH~Si~--Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~ 296 (297)
.++++|.+..+++|-. +...-.|+....+.++++ ..+.+.+.+....+.+|.+
T Consensus 6 ~~v~ly~~~~C~~C~~~~~~L~~~~i~~~~~di~~~-----~~~~~~l~~~~~~~~vP~l 60 (92)
T 2khp_A 6 VDVIIYTRPGCPYCARAKALLARKGAEFNEIDASAT-----PELRAEMQERSGRNTFPQI 60 (92)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTTCCCEEEESTTS-----HHHHHHHHHHHTSSCCCEE
T ss_pred ccEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCC-----HHHHHHHHHHhCCCCcCEE
Confidence 4678888877777642 233335788888888853 3344555544455667854
No 319
>2lhb_A Hemoglobin V (cyano Met); oxygen transport; HET: HEM; 2.00A {Petromyzon marinus} SCOP: a.1.1.2 PDB: 3lhb_A* 1f5o_A* 1f5p_A* 1uc3_A*
Probab=26.10 E-value=26 Score=26.98 Aligned_cols=28 Identities=11% Similarity=0.206 Sum_probs=24.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRY 44 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~ 44 (297)
+++.+|+.+|+.++..+..+.++|++..
T Consensus 65 ~~~~~~~~h~~~v~~~l~~~v~~ldd~~ 92 (149)
T 2lhb_A 65 KKSADVRWHAERIINAVDDAVASMDDTE 92 (149)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 4689999999999999999999998743
No 320
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=25.89 E-value=2.4e+02 Score=23.63 Aligned_cols=54 Identities=13% Similarity=0.213 Sum_probs=32.5
Q ss_pred CCceEEEecC-CCcchHHHHHHhcCCce--------------EEeeCCCCCCcCHHHHHHHHHHHHHCCC
Q psy1678 238 IANLVGYCSD-QAHSSVERAGLLGGVTI--------------RGLPADDSYKLRGDALEAAIEEDLKKGK 292 (297)
Q Consensus 238 ~~~~~i~~s~-~aH~Si~Kaa~~lg~~v--------------~~Vp~d~~~~md~~~L~~~i~~~~~~G~ 292 (297)
.|++++++.. ..|..+..|..+ |+-+ ..||+++++.-.+.-+-..|.....+|.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l-~IPvIaivDTn~dp~~Vdy~IP~Ndds~~si~li~~~la~ai~~g~ 225 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITL-GIPTICLIDTNCNPDLADISIPANDDAIASIRLILTKLVFAICEGR 225 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTT-TCCEEECCCSSSCCSSCSEECCCCSSSHHHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCccccHHHHHHHHh-CCCEEEEecCCCCccceeEEeeCCCccHHHHHHHHHHHHHHHHHHH
Confidence 4666665543 456666666654 5522 3677887776666666666666655554
No 321
>2kyg_A CAMP-dependent protein kinase type II-alpha regul subunit; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=25.62 E-value=17 Score=22.91 Aligned_cols=22 Identities=14% Similarity=0.454 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhcc
Q psy1678 23 KDFAKAMVDYVGNYLENIRDRY 44 (297)
Q Consensus 23 ~~~~~~~vd~i~~y~~~~~~~~ 44 (297)
|++-...++|.++|++.+.+.|
T Consensus 28 r~qP~Di~~Faa~yF~~l~~~r 49 (50)
T 2kyg_A 28 RQQPPDLVEFAVEYFTRLREAR 49 (50)
T ss_dssp HHCCSCHHHHHHHHHHHHHHTC
T ss_pred HHCCCCHHHHHHHHHHHHHHcc
Confidence 3444567899999999887643
No 322
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=25.51 E-value=2.5e+02 Score=23.60 Aligned_cols=73 Identities=10% Similarity=0.009 Sum_probs=40.7
Q ss_pred CeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEec---------CCCcchHHHHHHhcCCceEEeeC
Q psy1678 199 GGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCS---------DQAHSSVERAGLLGGVTIRGLPA 269 (297)
Q Consensus 199 ~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s---------~~aH~Si~Kaa~~lg~~v~~Vp~ 269 (297)
..++-|||--|.+.+.++-++ |.++ .-+....+ ...+-.+.+.|..+|+.+..+++
T Consensus 7 vvvl~SGGkDSs~al~~l~~~---------G~eV------~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~ 71 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAIKN---------RFSV------KFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFT 71 (237)
T ss_dssp EEEECCSSHHHHHHHHHHHHT---------TCEE------EEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC
T ss_pred EEEEecCcHHHHHHHHHHHHc---------CCeE------EEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEEC
Confidence 367889999999776654321 1100 00111111 23456788899999998888887
Q ss_pred CCCCCcCHHHHHHHHHH
Q psy1678 270 DDSYKLRGDALEAAIEE 286 (297)
Q Consensus 270 d~~~~md~~~L~~~i~~ 286 (297)
......-.++|.+.+++
T Consensus 72 ~g~~~~e~e~l~~~l~~ 88 (237)
T 3rjz_A 72 QGEKEKEVEDLKRVLSG 88 (237)
T ss_dssp ------CHHHHHHHHTT
T ss_pred CCCchHHHHHHHHHHHh
Confidence 64333345666666653
No 323
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=25.38 E-value=1.1e+02 Score=27.10 Aligned_cols=39 Identities=21% Similarity=0.135 Sum_probs=30.4
Q ss_pred HhcCCceEEeeCC--------CCCCcC---HHHHHHHHHHHHHCCCccEE
Q psy1678 258 LLGGVTIRGLPAD--------DSYKLR---GDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 258 ~~lg~~v~~Vp~d--------~~~~md---~~~L~~~i~~~~~~G~~Pf~ 296 (297)
+-+|++++|||+. ..+.+| .+.|++.|+.+.++|..+++
T Consensus 53 ~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIl 102 (340)
T 3qr3_A 53 NEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIV 102 (340)
T ss_dssp HHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3469999999973 356777 45677889999999988764
No 324
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=25.05 E-value=1e+02 Score=20.79 Aligned_cols=59 Identities=10% Similarity=0.001 Sum_probs=32.7
Q ss_pred CceEEEecCCCcchHH--HHHHhcCCceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccEEc
Q psy1678 239 ANLVGYCSDQAHSSVE--RAGLLGGVTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFYI 297 (297)
Q Consensus 239 ~~~~i~~s~~aH~Si~--Kaa~~lg~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~v 297 (297)
.++++|....+++|-. +...-+|+....+.++..-.-+-..+...+.+....+.+|.++
T Consensus 12 ~~v~ly~~~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~ 72 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVV 72 (92)
T ss_dssp SSSEEEECTTCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEE
Confidence 4578898888887753 2233368877777777421111122234444444445688753
No 325
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=23.97 E-value=1.8e+02 Score=26.76 Aligned_cols=68 Identities=13% Similarity=0.046 Sum_probs=45.5
Q ss_pred CCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCc-chHHHH-HHhcCCceEEeeCCCCCCc
Q psy1678 198 GGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAH-SSVERA-GLLGGVTIRGLPADDSYKL 275 (297)
Q Consensus 198 ~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH-~Si~Ka-a~~lg~~v~~Vp~d~~~~m 275 (297)
.++++|-||.-|.+.|+.+. .+.|..+-.++ +-..+- +.-+|+.++ ++.++++.+
T Consensus 358 v~~fvtHgG~~S~~Eal~~G----------------------vP~i~~P~~~DQ~~na~~l~~~~G~g~~-l~~~~~~~~ 414 (480)
T 2vch_A 358 TGGFLTHCGWNSTLESVVSG----------------------IPLIAWPLYAEQKMNAVLLSEDIRAALR-PRAGDDGLV 414 (480)
T ss_dssp EEEEEECCCHHHHHHHHHHT----------------------CCEEECCCSTTHHHHHHHHHHTTCCEEC-CCCCTTSCC
T ss_pred cCeEEecccchhHHHHHHcC----------------------CCEEeccccccchHHHHHHHHHhCeEEE-eecccCCcc
Confidence 35899999999998888762 23455555444 333343 356788764 344445689
Q ss_pred CHHHHHHHHHHHH
Q psy1678 276 RGDALEAAIEEDL 288 (297)
Q Consensus 276 d~~~L~~~i~~~~ 288 (297)
+.+.|+++|++..
T Consensus 415 ~~~~l~~av~~vl 427 (480)
T 2vch_A 415 RREEVARVVKGLM 427 (480)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 9999999988765
No 326
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=23.72 E-value=66 Score=23.81 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChh
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTAS 207 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT 207 (297)
-..=.+++++|++.||.|.+ .-.+.+|.|
T Consensus 49 GkAN~ali~~LAk~l~V~ks---------~V~Iv~G~t 77 (108)
T 1n91_A 49 GQANSHLVKFLGKQFRVAKS---------QVVIEKGEL 77 (108)
T ss_dssp HHHHHHHHHHHHHHTCCCTT---------TEEESSCTT
T ss_pred ChHHHHHHHHHHHHhCCccc---------eEEEEecCC
Confidence 45667899999999999985 577888876
No 327
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=23.47 E-value=3.5e+02 Score=23.15 Aligned_cols=31 Identities=10% Similarity=-0.105 Sum_probs=23.3
Q ss_pred ceEEEecCCCcchHHHHHHhcCCceEEeeCC
Q psy1678 240 NLVGYCSDQAHSSVERAGLLGGVTIRGLPAD 270 (297)
Q Consensus 240 ~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d 270 (297)
+.+|++++..-..-.+..+.+|.+|+.++.+
T Consensus 87 ~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 87 KITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp CEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred cEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 5688888776555566777889999988764
No 328
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=23.31 E-value=22 Score=18.56 Aligned_cols=10 Identities=40% Similarity=0.680 Sum_probs=7.4
Q ss_pred chHHHHHhhc
Q psy1678 2 QDQIHKKIKN 11 (297)
Q Consensus 2 ~~~~~~~~~~ 11 (297)
|.+|||.+|.
T Consensus 10 qkkirkelkq 19 (26)
T 1m46_B 10 QKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6788887764
No 329
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=23.10 E-value=1.9e+02 Score=23.89 Aligned_cols=55 Identities=7% Similarity=0.122 Sum_probs=37.6
Q ss_pred eEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeC
Q psy1678 200 GVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPA 269 (297)
Q Consensus 200 G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~ 269 (297)
++|.||+ -+||.||.-+... + ....++++++|...-..+.+-|.-.|+.+..++.
T Consensus 6 avl~Sg~-Gsnl~ali~~~~~--------~------~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 6 AIFASGS-GTNAEAIIQSQKA--------G------QLPCEVALLITDKPGAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp EEECCTT-CHHHHHHHHHHHT--------T------CCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCG
T ss_pred EEEEeCC-chHHHHHHHHHHc--------C------CCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeCh
Confidence 6777764 5899999976432 1 1124677788876656677777888998877654
No 330
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=23.03 E-value=2.3e+02 Score=20.88 Aligned_cols=55 Identities=15% Similarity=0.087 Sum_probs=34.9
Q ss_pred CceEEEecCCCcchHHHH-HHh---cC---CceEEeeCCCCCCcCHHHHHHHHHHHHHCCCccEE
Q psy1678 239 ANLVGYCSDQAHSSVERA-GLL---GG---VTIRGLPADDSYKLRGDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 239 ~~~~i~~s~~aH~Si~Ka-a~~---lg---~~v~~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~ 296 (297)
.++++|......||. ++ ..+ +| +....|.+|.+- +-..+++.+.+......+|.+
T Consensus 37 ~~Vvvy~~~~Cp~C~-~a~k~~L~~~~~~~i~~~~vdvd~~~--~~~~~~~~L~~~~g~~tVP~v 98 (129)
T 3ctg_A 37 KEVFVAAKTYCPYCK-ATLSTLFQELNVPKSKALVLELDEMS--NGSEIQDALEEISGQKTVPNV 98 (129)
T ss_dssp SSEEEEECTTCHHHH-HHHHHHHTTSCCCGGGEEEEEGGGST--THHHHHHHHHHHHSCCSSCEE
T ss_pred CCEEEEECCCCCchH-HHHHHHHHhcCccCCCcEEEEccccC--CHHHHHHHHHHHhCCCCCCEE
Confidence 468899888888876 33 333 56 667777777542 344566666665544457754
No 331
>1eca_A Erythrocruorin (AQUO Met); oxygen transport; HET: HEM; 1.40A {Chironomus thummi thummi} SCOP: a.1.1.2 PDB: 1ecd_A* 1ecn_A* 1eco_A*
Probab=22.72 E-value=1.1e+02 Score=22.99 Aligned_cols=59 Identities=10% Similarity=0.228 Sum_probs=39.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 17 GDVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 17 ~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
+++.+|+.+|+.++..+.+-.+++.+ +.+.++.. .....-.+++.|+.+..-++..+..
T Consensus 50 ~~~~~~~~Hg~~V~~~l~~~v~~l~~--l~~~l~~L~~~H~~~~V~p~~F~~l~~~ll~~l~~ 110 (136)
T 1eca_A 50 KGTAPFETHANRIVGFFSKIIGELPN--IEADVNTFVASHKPRGVTHDQLNNFRAGFVSYMKA 110 (136)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHTTTC--CHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHccHH--HHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999988743 22222221 1112246778888777666655554
No 332
>2w72_C Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7s_A* 1qi8_A* 1j7y_A* 1o1i_A* 2w72_A* 1bzz_A* 1c7b_A* 1j7w_A* 1o1k_A* 1o1o_A* 1y0c_A* 1ydz_A* 3ia3_B* 1ird_A* 1a00_A* 1a0u_A* 1a0z_A* 1a3n_A* 1a9w_A* 1b86_A* ...
Probab=22.26 E-value=97 Score=23.28 Aligned_cols=59 Identities=14% Similarity=0.122 Sum_probs=40.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchhhhhccc--cCCC-CCCChHHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQLQRFSQ--MGSN-IMGDVNEFKDFAKAMVDYVGNY 78 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~~~v~p~--l~~~-~p~~~e~f~~~l~~v~d~i~~~ 78 (297)
++.+|+.+|+.++..|..+.+++++.. +.++.- .... .-.+++.|..+.+.++..+.+.
T Consensus 51 ~~~~~~~h~~~v~~al~~~v~~ld~l~--~~l~~L~~~H~~~~gV~p~~f~~~~~~Ll~~l~~~ 112 (141)
T 2w72_C 51 GSAQVKGQGKKVADALTNAVAHVDDMP--NALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAH 112 (141)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTSHH--HHTHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhHhhhH--HHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998887621 222211 1112 3456788887777776666653
No 333
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=21.53 E-value=83 Score=27.64 Aligned_cols=31 Identities=23% Similarity=0.078 Sum_probs=25.1
Q ss_pred EeeCCCCCCcCHHHHHHHHHHHHHCCCccEE
Q psy1678 266 GLPADDSYKLRGDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 266 ~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~ 296 (297)
.-|-+++|++|.+.|++.++...++|-.-++
T Consensus 33 vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~ 63 (315)
T 3na8_A 33 ITPFAADGGLDLPALGRSIERLIDGGVHAIA 63 (315)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHHHTTCSEEE
T ss_pred eCcCCCCCCcCHHHHHHHHHHHHHcCCCEEE
Confidence 3456889999999999999999998864443
No 334
>1mba_A Myoglobin; oxygen storage; HET: HEM; 1.60A {Aplysia limacina} SCOP: a.1.1.2 PDB: 2fal_A* 3mba_A* 4mba_A* 5mba_A* 2fam_A* 1dm1_A*
Probab=21.31 E-value=71 Score=24.21 Aligned_cols=60 Identities=7% Similarity=0.104 Sum_probs=39.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHHHHHH
Q psy1678 18 DVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVDYVGN 77 (297)
Q Consensus 18 ~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d~i~~ 77 (297)
+..+|+.+|+.++..|..+.++|++...+ +.++.- .....-.+++.|..+.+-++..+.+
T Consensus 57 ~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~ 119 (147)
T 1mba_A 57 ASPKLRDVSSRIFTRLNEFVNNAANAGKMSAMLSQFAKEHVGFGVGSAQFENVRSMFPGFVAS 119 (147)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 56689999999999999999999875332 333221 1112346778888776666655543
No 335
>1hlm_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.90A {Caudina arenicola} SCOP: a.1.1.2
Probab=21.05 E-value=71 Score=24.59 Aligned_cols=58 Identities=9% Similarity=0.122 Sum_probs=36.7
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhhcchh-hhhccc--cCCCCCCChHHHHHHHHHHHH
Q psy1678 15 IMGDVNEFKDFAKAMVDYVGNYLENIRDRYVQ-LQRFSQ--MGSNIMGDVNEFKDFAKAMVD 73 (297)
Q Consensus 15 ~~~~~~~f~~~~~~~vd~i~~y~~~~~~~~v~-~~v~p~--l~~~~p~~~e~f~~~l~~v~d 73 (297)
.++++.+|+.+++.++..|..+.+++.+ ..+ +.++.- .....-.+++.|..+.+.++.
T Consensus 64 ~l~~~~~~~~h~~~v~~~l~~~v~~ld~-~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~Ll~ 124 (159)
T 1hlm_A 64 ELRTSRQMHAHAIRVSALMTTYIDEMDT-EVLPELLATLTRTHDKNHVGKKNYDLFGKVLME 124 (159)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHHTTTS-TTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Confidence 3567889999999999999999999987 332 222221 111123455666655554444
No 336
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=21.03 E-value=86 Score=27.57 Aligned_cols=31 Identities=19% Similarity=0.135 Sum_probs=23.9
Q ss_pred EeeCCCCCCcCHHHHHHHHHHHHHCCCccEE
Q psy1678 266 GLPADDSYKLRGDALEAAIEEDLKKGKIPFY 296 (297)
Q Consensus 266 ~Vp~d~~~~md~~~L~~~i~~~~~~G~~Pf~ 296 (297)
.-|-+++|++|.+.|++.++...++|-.-++
T Consensus 31 vTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~ 61 (315)
T 3si9_A 31 ITPFDDNGAIDEKAFCNFVEWQITQGINGVS 61 (315)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHHHTTCSEEE
T ss_pred ECCCCCCCCcCHHHHHHHHHHHHHcCCCEEE
Confidence 4466888899999999999888888754433
No 337
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=20.92 E-value=3.2e+02 Score=23.50 Aligned_cols=84 Identities=13% Similarity=0.075 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHcCCCccccccCCCCCCeEEcCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCC
Q psy1678 170 TELEVVMLDWLGKMLDLPKEFLACSGGKGGGVIQGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQA 249 (297)
Q Consensus 170 ~~iE~~v~~~l~~llg~~~~~~~~~~~~~~G~~tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~a 249 (297)
..++. .+.-+++-+|..-.-...+...--++|.||. -+||.+|+-+... | ....++++++|..
T Consensus 65 ~~L~~-~f~~la~~l~m~~~l~~~~~~~ri~vl~Sg~-g~~l~~ll~~~~~--------g------~l~~~i~~Visn~- 127 (286)
T 3n0v_A 65 AGFRA-GLAERSEAFGMAFELTAPNHRPKVVIMVSKA-DHCLNDLLYRQRI--------G------QLGMDVVAVVSNH- 127 (286)
T ss_dssp HHHHH-HHHHHHGGGTCEEEEECTTCCCEEEEEESSC-CHHHHHHHHHHHT--------T------SSCCEEEEEEESS-
T ss_pred HHHHH-HHHHHHHHcCCEEEeecCCCCcEEEEEEeCC-CCCHHHHHHHHHC--------C------CCCcEEEEEEeCc-
Confidence 34554 3356677777642211111122246777765 4799999876321 1 1124677777754
Q ss_pred cchHHHHHHhcCCceEEeeCCC
Q psy1678 250 HSSVERAGLLGGVTIRGLPADD 271 (297)
Q Consensus 250 H~Si~Kaa~~lg~~v~~Vp~d~ 271 (297)
.....-|.-.|+.+..+|...
T Consensus 128 -~~~~~~A~~~gIp~~~~~~~~ 148 (286)
T 3n0v_A 128 -PDLEPLAHWHKIPYYHFALDP 148 (286)
T ss_dssp -STTHHHHHHTTCCEEECCCBT
T ss_pred -HHHHHHHHHcCCCEEEeCCCc
Confidence 444556778899998888754
No 338
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=20.76 E-value=1.1e+02 Score=27.53 Aligned_cols=69 Identities=14% Similarity=0.035 Sum_probs=38.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhCCCCC-------CcCCCCceEEEecCCCcchHHHHHHhcCC-ceEEeeCC-CCCC
Q psy1678 204 GTASEATLVALLGAKAKTMQRVKEAHPDWK-------DSDIIANLVGYCSDQAHSSVERAGLLGGV-TIRGLPAD-DSYK 274 (297)
Q Consensus 204 sGGT~anl~Al~~AR~~~~~~~~~~~~~~~-------~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~-~v~~Vp~d-~~~~ 274 (297)
.||+||.+.|-.+.|-+..- ....||.+. +.++.+...+.++.. ++....-.--|+ .|++||.. ..||
T Consensus 115 aGG~Ea~~fa~~L~rMY~r~-ae~~g~k~ev~~~~~~~~gG~k~v~~~i~G~--~ayg~Lk~E~GvHRvqRvp~~es~gR 191 (354)
T 3d5a_X 115 TGGEEAALFARDLFNMYLRF-AEEMGFETEVLDSHPTDLGGFSKVVFEVRGP--GAYGTFKYESGVHRVQRVPVTETQGR 191 (354)
T ss_dssp SSHHHHHHHHHHHHHHHHHH-HHHHTCEEEEEEEEECTTSSEEEEEEEEEST--THHHHHGGGCSEEEEEECCSSCSSCC
T ss_pred CCcHHHHHHHHHHHHHHHHH-HHHcCCeEEEEeCCCCCCCccEEEEEEEECc--cHHHHHHhccCeeEEEecCCcCCCCc
Confidence 68999999888887654321 111244321 112345555555544 333333334576 78888854 4565
Q ss_pred c
Q psy1678 275 L 275 (297)
Q Consensus 275 m 275 (297)
+
T Consensus 192 ~ 192 (354)
T 3d5a_X 192 I 192 (354)
T ss_dssp C
T ss_pred C
Confidence 4
No 339
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=20.43 E-value=1e+02 Score=21.89 Aligned_cols=24 Identities=25% Similarity=0.385 Sum_probs=21.9
Q ss_pred CCCCcCHHHHHHHHHHHHHCCCcc
Q psy1678 271 DSYKLRGDALEAAIEEDLKKGKIP 294 (297)
Q Consensus 271 ~~~~md~~~L~~~i~~~~~~G~~P 294 (297)
+.+-+.|.+|+++.+....+|++|
T Consensus 66 ~~~Pl~P~HireA~rrl~~~g~~p 89 (89)
T 1bh9_B 66 EMPPLQPKHMREAVRRLKSKGQIP 89 (89)
T ss_dssp CCSSCCHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCCcHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999887
No 340
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=20.43 E-value=1.7e+02 Score=25.76 Aligned_cols=53 Identities=9% Similarity=-0.051 Sum_probs=39.0
Q ss_pred eEE-cCChhHHHHHHHHHHHHHHHHHHHhhCCCCCCcCCCCceEEEecCCCcchHHHHHHhcCCceEEeeCC
Q psy1678 200 GVI-QGTASEATLVALLGAKAKTMQRVKEAHPDWKDSDIIANLVGYCSDQAHSSVERAGLLGGVTIRGLPAD 270 (297)
Q Consensus 200 G~~-tsGGT~anl~Al~~AR~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~aH~Si~Kaa~~lg~~v~~Vp~d 270 (297)
+++ +|+|..+.=+|+.+++- | -+.+||+++.+-..-.+..+.+|.+|+.++..
T Consensus 89 ~Vv~aSsGN~g~alA~~aa~~---------G---------~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 89 TLIEPTSGNMGISMAFMAAMK---------G---------YKMVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp EEEEECSSHHHHHHHHHHHHH---------T---------CEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEEEeCCcHHHHHHHHHHHHc---------C---------CcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 444 47888877777666532 1 36789999988877777888899999988653
Done!