Query psy16780
Match_columns 202
No_of_seqs 220 out of 1780
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 21:52:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16780.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16780hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sr7_A Isopentenyl-diphosphate 100.0 1.9E-32 6.5E-37 240.4 17.6 182 14-196 142-355 (365)
2 3sgz_A Hydroxyacid oxidase 2; 100.0 5.4E-32 1.9E-36 236.1 19.5 154 45-202 198-351 (352)
3 2nli_A Lactate oxidase; flavoe 100.0 4.2E-31 1.4E-35 232.4 19.0 159 41-199 206-364 (368)
4 2nzl_A Hydroxyacid oxidase 1; 100.0 6.8E-31 2.3E-35 232.8 18.9 162 39-200 227-388 (392)
5 3vkj_A Isopentenyl-diphosphate 100.0 2.1E-29 7.3E-34 221.5 19.2 182 13-196 116-343 (368)
6 1gox_A (S)-2-hydroxy-acid oxid 100.0 8.3E-29 2.8E-33 217.9 20.4 160 39-198 200-359 (370)
7 1kbi_A Cytochrome B2, L-LCR; f 100.0 5.1E-29 1.7E-33 227.3 18.8 160 41-200 320-484 (511)
8 1p4c_A L(+)-mandelate dehydrog 100.0 6.9E-28 2.4E-32 212.8 19.6 158 37-196 198-355 (380)
9 1vcf_A Isopentenyl-diphosphate 100.0 2.7E-27 9.1E-32 205.3 18.0 184 4-193 107-329 (332)
10 1p0k_A Isopentenyl-diphosphate 99.9 5.1E-26 1.7E-30 198.3 16.6 182 14-196 114-328 (349)
11 1ypf_A GMP reductase; GUAC, pu 99.9 3.5E-25 1.2E-29 192.5 13.8 149 47-197 131-325 (336)
12 2c6q_A GMP reductase 2; TIM ba 99.9 9.7E-24 3.3E-28 184.5 11.6 148 47-194 143-342 (351)
13 2qr6_A IMP dehydrogenase/GMP r 99.9 3E-22 1E-26 177.1 12.1 150 47-196 194-392 (393)
14 1eep_A Inosine 5'-monophosphat 99.9 2E-20 7E-25 165.9 17.4 151 45-195 174-384 (404)
15 1ea0_A Glutamate synthase [NAD 99.8 8E-20 2.7E-24 180.6 17.8 153 43-195 966-1168(1479)
16 1ofd_A Ferredoxin-dependent gl 99.8 6.8E-20 2.3E-24 181.4 16.2 155 42-196 1000-1204(1520)
17 3r2g_A Inosine 5'-monophosphat 99.8 4.7E-20 1.6E-24 161.4 13.3 144 46-192 122-317 (361)
18 1me8_A Inosine-5'-monophosphat 99.8 3.4E-20 1.2E-24 168.8 12.5 151 45-195 263-476 (503)
19 1vrd_A Inosine-5'-monophosphat 99.8 4.2E-19 1.4E-23 161.0 17.3 148 46-193 259-463 (494)
20 1jub_A Dihydroorotate dehydrog 99.8 2.8E-19 9.7E-24 153.0 14.0 138 48-193 142-308 (311)
21 2e6f_A Dihydroorotate dehydrog 99.8 3.2E-19 1.1E-23 152.9 13.0 137 48-193 144-310 (314)
22 1jcn_A Inosine monophosphate d 99.8 3.5E-19 1.2E-23 162.4 13.9 146 45-192 276-482 (514)
23 3usb_A Inosine-5'-monophosphat 99.8 3.7E-19 1.3E-23 162.3 13.8 147 46-192 278-481 (511)
24 3i65_A Dihydroorotate dehydrog 99.8 9.9E-19 3.4E-23 155.3 15.2 140 46-193 230-411 (415)
25 4avf_A Inosine-5'-monophosphat 99.8 1.6E-18 5.5E-23 157.4 16.5 147 46-192 251-459 (490)
26 3ffs_A Inosine-5-monophosphate 99.8 2E-18 6.9E-23 152.9 15.8 148 45-192 165-370 (400)
27 3zwt_A Dihydroorotate dehydrog 99.8 4E-18 1.4E-22 149.7 16.4 140 46-193 195-364 (367)
28 4fxs_A Inosine-5'-monophosphat 99.8 2.3E-18 7.7E-23 156.6 14.0 146 47-192 254-458 (496)
29 3khj_A Inosine-5-monophosphate 99.8 3.9E-18 1.3E-22 149.5 14.7 148 45-192 126-331 (361)
30 1tv5_A Dhodehase, dihydroorota 99.8 6.7E-18 2.3E-22 151.4 16.4 123 63-193 295-439 (443)
31 4ef8_A Dihydroorotate dehydrog 99.8 3E-18 1E-22 149.8 12.5 137 47-192 176-342 (354)
32 3oix_A Putative dihydroorotate 99.8 5.6E-18 1.9E-22 147.6 12.8 138 47-192 176-340 (345)
33 4fo4_A Inosine 5'-monophosphat 99.7 1.1E-17 3.6E-22 146.9 12.9 148 45-192 129-335 (366)
34 1ep3_A Dihydroorotate dehydrog 99.7 3.3E-17 1.1E-21 139.6 15.4 134 48-192 148-305 (311)
35 1zfj_A Inosine monophosphate d 99.7 1.4E-17 4.7E-22 150.8 13.7 149 46-194 255-463 (491)
36 4af0_A Inosine-5'-monophosphat 99.7 3.5E-17 1.2E-21 148.4 14.1 147 46-192 303-523 (556)
37 2cu0_A Inosine-5'-monophosphat 99.7 1.4E-17 4.8E-22 150.9 10.1 142 47-193 251-454 (486)
38 1f76_A Dihydroorotate dehydrog 99.7 1.9E-16 6.4E-21 137.0 12.6 107 47-153 185-323 (336)
39 1vhn_A Putative flavin oxidore 99.7 2.1E-16 7.2E-21 136.0 9.6 144 46-193 108-271 (318)
40 1gte_A Dihydropyrimidine dehyd 99.6 1.4E-15 4.9E-20 148.4 14.4 136 47-191 686-851 (1025)
41 3tjx_A Dihydroorotate dehydrog 99.6 1.8E-14 6.1E-19 125.6 13.6 137 47-192 176-342 (354)
42 3b0p_A TRNA-dihydrouridine syn 99.5 1.5E-13 5E-18 119.9 16.4 145 46-194 108-280 (350)
43 3gr7_A NADPH dehydrogenase; fl 99.4 7E-12 2.4E-16 108.9 14.2 104 48-153 193-312 (340)
44 1z41_A YQJM, probable NADH-dep 99.3 1.6E-11 5.4E-16 106.4 13.5 103 49-153 194-312 (338)
45 2gjl_A Hypothetical protein PA 99.3 1.9E-11 6.5E-16 105.2 13.4 98 53-154 108-207 (328)
46 1mzh_A Deoxyribose-phosphate a 99.3 1.7E-11 5.7E-16 100.7 12.1 100 46-150 98-206 (225)
47 2z6i_A Trans-2-enoyl-ACP reduc 99.3 1.5E-11 5.2E-16 106.2 12.2 95 54-154 101-197 (332)
48 3bo9_A Putative nitroalkan dio 99.3 1.7E-11 6E-16 105.7 12.5 96 53-154 114-211 (326)
49 3igs_A N-acetylmannosamine-6-p 99.3 9E-11 3.1E-15 96.8 14.8 101 48-153 114-215 (232)
50 3hgj_A Chromate reductase; TIM 99.3 5.3E-11 1.8E-15 103.6 13.2 103 49-153 202-323 (349)
51 1y0e_A Putative N-acetylmannos 99.3 1.1E-10 3.7E-15 94.7 13.8 99 51-152 105-208 (223)
52 3q58_A N-acetylmannosamine-6-p 99.2 1.1E-10 3.8E-15 96.1 13.7 101 48-153 114-215 (229)
53 3l5l_A Xenobiotic reductase A; 99.2 2E-10 6.8E-15 100.5 13.4 102 50-153 209-330 (363)
54 3bw2_A 2-nitropropane dioxygen 99.2 4.4E-10 1.5E-14 98.3 13.6 99 52-154 134-243 (369)
55 3kru_A NADH:flavin oxidoreduct 99.1 5.8E-10 2E-14 96.9 12.8 103 48-153 192-312 (343)
56 1geq_A Tryptophan synthase alp 99.1 1.3E-09 4.4E-14 89.7 13.7 130 43-175 59-246 (248)
57 2r14_A Morphinone reductase; H 99.1 4.7E-10 1.6E-14 98.6 10.4 101 49-153 216-333 (377)
58 3tsm_A IGPS, indole-3-glycerol 99.1 1.8E-09 6.1E-14 91.0 13.4 102 52-153 108-254 (272)
59 2gou_A Oxidoreductase, FMN-bin 99.1 8.9E-10 3E-14 96.5 12.0 99 49-153 211-327 (365)
60 3qja_A IGPS, indole-3-glycerol 99.1 1.6E-09 5.4E-14 91.4 12.3 102 52-153 101-247 (272)
61 3l5a_A NADH/flavin oxidoreduct 99.1 8.6E-10 2.9E-14 98.2 11.2 103 50-153 222-351 (419)
62 1yxy_A Putative N-acetylmannos 99.0 3E-09 1E-13 86.9 12.5 97 51-152 119-219 (234)
63 1vyr_A Pentaerythritol tetrani 99.0 2.3E-09 7.8E-14 93.8 12.5 100 49-153 211-328 (364)
64 2hsa_B 12-oxophytodienoate red 99.0 1.2E-09 4.1E-14 96.8 10.8 102 49-153 221-353 (402)
65 1icp_A OPR1, 12-oxophytodienoa 99.0 6.9E-10 2.3E-14 97.5 8.6 102 49-153 217-335 (376)
66 1wv2_A Thiazole moeity, thiazo 99.0 5.7E-09 1.9E-13 86.9 13.6 86 64-153 135-221 (265)
67 2nv1_A Pyridoxal biosynthesis 99.0 2.8E-10 9.6E-15 97.1 4.7 131 52-190 66-274 (305)
68 3gka_A N-ethylmaleimide reduct 99.0 2.2E-09 7.4E-14 93.9 10.2 95 48-153 210-321 (361)
69 4ab4_A Xenobiotic reductase B; 99.0 2E-09 7E-14 94.1 10.0 94 49-153 203-313 (362)
70 1rd5_A Tryptophan synthase alp 99.0 3E-08 1E-12 82.5 16.1 130 45-176 75-259 (262)
71 3nav_A Tryptophan synthase alp 98.9 2.5E-08 8.5E-13 84.0 14.3 132 42-175 74-266 (271)
72 3vnd_A TSA, tryptophan synthas 98.9 4.4E-08 1.5E-12 82.3 15.0 131 43-175 73-264 (267)
73 1xm3_A Thiazole biosynthesis p 98.9 5E-08 1.7E-12 81.7 15.0 120 53-179 113-236 (264)
74 4adt_A Pyridoxine biosynthetic 98.9 2.1E-09 7.1E-14 91.7 6.4 96 55-153 115-243 (297)
75 2zbt_A Pyridoxal biosynthesis 98.9 1E-09 3.5E-14 93.0 4.3 123 64-195 125-279 (297)
76 3aty_A Tcoye, prostaglandin F2 98.9 8.7E-09 3E-13 90.6 10.1 97 50-153 228-341 (379)
77 1qop_A Tryptophan synthase alp 98.8 1.1E-07 3.8E-12 79.6 15.7 105 48-155 77-241 (268)
78 3ngj_A Deoxyribose-phosphate a 98.8 2.1E-08 7.1E-13 82.9 10.7 100 46-150 123-231 (239)
79 1yad_A Regulatory protein TENI 98.8 6.3E-08 2.2E-12 78.4 13.2 79 72-153 117-197 (221)
80 1ps9_A 2,4-dienoyl-COA reducta 98.8 9.2E-09 3.1E-13 96.0 8.7 104 48-153 190-315 (671)
81 1vc4_A Indole-3-glycerol phosp 98.8 2.7E-08 9.3E-13 82.9 10.6 101 52-153 94-241 (254)
82 2yzr_A Pyridoxal biosynthesis 98.8 7E-08 2.4E-12 82.9 13.2 45 107-153 230-276 (330)
83 4a29_A Engineered retro-aldol 98.8 9.8E-08 3.4E-12 79.4 13.6 106 48-153 85-238 (258)
84 2y88_A Phosphoribosyl isomeras 98.8 2.3E-08 8E-13 81.8 9.7 76 75-153 152-230 (244)
85 1ka9_F Imidazole glycerol phos 98.8 5E-08 1.7E-12 80.2 11.2 76 75-153 155-230 (252)
86 3oa3_A Aldolase; structural ge 98.8 9.1E-08 3.1E-12 80.9 12.9 102 46-149 154-264 (288)
87 1h5y_A HISF; histidine biosynt 98.8 7.2E-08 2.5E-12 78.5 11.8 76 75-153 157-232 (253)
88 2uva_G Fatty acid synthase bet 98.8 1.2E-08 4.3E-13 105.1 8.4 96 55-154 684-801 (2060)
89 1qo2_A Molecule: N-((5-phospho 98.8 4.8E-08 1.6E-12 80.1 10.3 76 75-153 147-228 (241)
90 2htm_A Thiazole biosynthesis p 98.7 8.1E-08 2.8E-12 80.2 11.5 87 64-153 124-212 (268)
91 1thf_D HISF protein; thermophI 98.7 5.4E-08 1.8E-12 80.0 10.1 76 75-153 154-229 (253)
92 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 5.9E-08 2E-12 77.5 10.1 99 52-153 48-183 (205)
93 1vzw_A Phosphoribosyl isomeras 98.7 2.8E-08 9.6E-13 81.5 8.3 76 75-153 149-227 (244)
94 1o94_A Tmadh, trimethylamine d 98.7 3.3E-08 1.1E-12 93.3 9.4 103 48-153 198-326 (729)
95 3k30_A Histamine dehydrogenase 98.7 3.1E-08 1.1E-12 92.8 8.6 102 49-153 207-329 (690)
96 3o07_A Pyridoxine biosynthesis 98.7 5.6E-08 1.9E-12 81.6 9.1 89 62-153 113-234 (291)
97 3r12_A Deoxyribose-phosphate a 98.7 2E-07 6.7E-12 77.9 12.3 99 46-149 139-246 (260)
98 1pii_A N-(5'phosphoribosyl)ant 98.7 6.6E-08 2.2E-12 86.7 9.9 130 52-191 96-270 (452)
99 1jvn_A Glutamine, bifunctional 98.7 8E-08 2.7E-12 88.3 10.6 76 75-153 455-531 (555)
100 2w6r_A Imidazole glycerol phos 98.7 4.1E-08 1.4E-12 81.4 7.8 76 75-153 159-234 (266)
101 1ujp_A Tryptophan synthase alp 98.6 2.4E-07 8.3E-12 77.9 11.6 122 46-174 73-253 (271)
102 2agk_A 1-(5-phosphoribosyl)-5- 98.6 5.4E-08 1.9E-12 81.4 7.5 74 76-151 162-239 (260)
103 2tps_A Protein (thiamin phosph 98.6 2E-07 6.7E-12 75.4 10.5 95 56-153 107-205 (227)
104 4gj1_A 1-(5-phosphoribosyl)-5- 98.6 4.1E-07 1.4E-11 75.2 12.6 103 49-153 60-229 (243)
105 2ekc_A AQ_1548, tryptophan syn 98.6 5.9E-07 2E-11 75.0 13.6 124 44-171 73-257 (262)
106 3ndo_A Deoxyribose-phosphate a 98.6 3.6E-07 1.2E-11 75.2 11.9 100 46-149 108-220 (231)
107 3o63_A Probable thiamine-phosp 98.6 3.1E-07 1.1E-11 76.1 11.6 80 73-153 143-224 (243)
108 3tdn_A FLR symmetric alpha-bet 98.6 2.9E-07 9.8E-12 75.7 11.1 76 75-153 38-113 (247)
109 2v82_A 2-dehydro-3-deoxy-6-pho 98.6 2.4E-07 8.3E-12 74.4 9.6 114 53-178 91-204 (212)
110 3tdn_A FLR symmetric alpha-bet 98.6 8.5E-09 2.9E-13 85.0 1.0 76 75-153 159-234 (247)
111 1ub3_A Aldolase protein; schif 98.6 6.5E-07 2.2E-11 73.1 12.0 99 46-149 99-206 (220)
112 1xi3_A Thiamine phosphate pyro 98.6 6.5E-07 2.2E-11 71.5 11.9 78 73-153 116-195 (215)
113 3f4w_A Putative hexulose 6 pho 98.5 3.9E-07 1.3E-11 72.9 9.6 95 54-153 94-192 (211)
114 2qjg_A Putative aldolase MJ040 98.5 1.3E-06 4.5E-11 72.6 13.2 80 63-153 144-242 (273)
115 2yw3_A 4-hydroxy-2-oxoglutarat 98.4 1.3E-06 4.5E-11 70.5 10.3 93 51-153 92-184 (207)
116 3ovp_A Ribulose-phosphate 3-ep 98.4 7.4E-06 2.5E-10 67.1 14.4 123 51-181 49-224 (228)
117 3tjl_A NADPH dehydrogenase; OL 98.4 2.8E-07 9.6E-12 81.6 6.1 104 48-153 217-351 (407)
118 1i4n_A Indole-3-glycerol phosp 98.4 3.8E-06 1.3E-10 69.9 11.6 95 53-153 140-235 (251)
119 1ka9_F Imidazole glycerol phos 98.3 2.8E-06 9.7E-11 69.6 10.3 76 75-153 34-109 (252)
120 1thf_D HISF protein; thermophI 98.3 3.2E-06 1.1E-10 69.3 10.6 76 75-153 33-108 (253)
121 1vcv_A Probable deoxyribose-ph 98.3 8.3E-06 2.8E-10 66.8 12.4 103 46-149 94-221 (226)
122 2fli_A Ribulose-phosphate 3-ep 98.3 5.2E-06 1.8E-10 66.7 11.0 100 53-153 50-203 (220)
123 1h5y_A HISF; histidine biosynt 98.3 8E-06 2.7E-10 66.2 11.5 77 74-153 35-111 (253)
124 1w8s_A FBP aldolase, fructose- 98.3 1.8E-05 6.2E-10 66.0 13.7 94 50-153 121-236 (263)
125 3tha_A Tryptophan synthase alp 98.3 2.6E-06 8.8E-11 70.9 8.1 121 42-167 68-246 (252)
126 3jr2_A Hexulose-6-phosphate sy 98.2 2.2E-06 7.6E-11 69.3 7.3 97 54-154 100-200 (218)
127 3inp_A D-ribulose-phosphate 3- 98.2 1.6E-05 5.4E-10 65.9 12.5 116 52-174 73-243 (246)
128 2y88_A Phosphoribosyl isomeras 98.2 9.8E-06 3.4E-10 66.0 11.0 75 75-153 34-108 (244)
129 1qap_A Quinolinic acid phospho 98.2 1.4E-05 4.8E-10 67.9 11.8 87 53-151 196-283 (296)
130 4a3u_A NCR, NADH\:flavin oxido 98.2 5.2E-06 1.8E-10 72.3 9.2 100 51-153 204-320 (358)
131 2qr6_A IMP dehydrogenase/GMP r 98.2 6.6E-06 2.3E-10 72.2 9.8 98 48-149 140-240 (393)
132 1vzw_A Phosphoribosyl isomeras 98.2 1.3E-05 4.3E-10 65.5 10.4 75 75-153 35-109 (244)
133 2b7n_A Probable nicotinate-nuc 98.2 7E-06 2.4E-10 69.0 8.9 88 53-152 169-261 (273)
134 2uv8_G Fatty acid synthase sub 98.2 2.4E-06 8.1E-11 88.2 7.0 91 62-154 697-808 (2051)
135 1qo2_A Molecule: N-((5-phospho 98.1 2.9E-06 9.8E-11 69.4 5.9 75 75-153 33-107 (241)
136 4e38_A Keto-hydroxyglutarate-a 98.1 1E-05 3.6E-10 66.4 9.2 94 49-152 113-206 (232)
137 1rpx_A Protein (ribulose-phosp 98.1 1.5E-05 5E-10 64.7 9.8 102 51-153 55-212 (230)
138 3vk5_A MOEO5; TIM barrel, tran 98.1 1E-05 3.5E-10 68.1 8.9 70 78-153 192-261 (286)
139 1p1x_A Deoxyribose-phosphate a 98.1 8.1E-06 2.8E-10 68.2 8.2 94 46-143 113-222 (260)
140 2a4a_A Deoxyribose-phosphate a 98.1 1.2E-05 4.2E-10 67.8 9.3 93 46-143 134-249 (281)
141 1vhc_A Putative KHG/KDPG aldol 98.1 2.3E-05 7.9E-10 64.0 10.6 93 50-153 97-190 (224)
142 1h1y_A D-ribulose-5-phosphate 98.1 8E-05 2.7E-09 60.4 13.7 114 53-175 103-222 (228)
143 1n7k_A Deoxyribose-phosphate a 98.1 2.8E-05 9.7E-10 63.9 10.6 90 51-148 117-221 (234)
144 1tqj_A Ribulose-phosphate 3-ep 98.1 1.1E-05 3.7E-10 66.0 7.8 103 50-153 48-206 (230)
145 2w6r_A Imidazole glycerol phos 98.1 7.5E-06 2.6E-10 67.6 6.9 76 74-152 32-107 (266)
146 3vzx_A Heptaprenylglyceryl pho 98.0 6.3E-05 2.1E-09 61.6 11.9 77 81-170 149-225 (228)
147 1x1o_A Nicotinate-nucleotide p 98.0 6.7E-05 2.3E-09 63.4 12.1 88 53-152 183-272 (286)
148 2jbm_A Nicotinate-nucleotide p 98.0 1.5E-05 5.1E-10 67.9 8.0 88 53-152 184-276 (299)
149 3glc_A Aldolase LSRF; TIM barr 98.0 7E-05 2.4E-09 63.6 11.9 89 52-153 156-262 (295)
150 3cwo_X Beta/alpha-barrel prote 98.0 4.1E-05 1.4E-09 60.8 9.7 74 75-153 133-208 (237)
151 3tqv_A Nicotinate-nucleotide p 97.9 6.4E-05 2.2E-09 63.5 10.8 86 54-151 187-273 (287)
152 2p10_A MLL9387 protein; putati 97.9 0.00032 1.1E-08 58.9 14.1 98 71-175 169-279 (286)
153 3ceu_A Thiamine phosphate pyro 97.9 2.7E-05 9.1E-10 62.6 7.2 80 72-153 95-177 (210)
154 3l0g_A Nicotinate-nucleotide p 97.9 9.6E-05 3.3E-09 62.7 10.7 85 54-150 196-281 (300)
155 1wbh_A KHG/KDPG aldolase; lyas 97.9 9.3E-05 3.2E-09 59.9 10.2 90 53-153 99-189 (214)
156 3ajx_A 3-hexulose-6-phosphate 97.9 8.1E-05 2.8E-09 59.1 9.4 93 55-153 95-191 (207)
157 3c2e_A Nicotinate-nucleotide p 97.9 1.7E-05 5.9E-10 67.3 5.7 87 53-151 186-280 (294)
158 3paj_A Nicotinate-nucleotide p 97.8 0.0002 6.8E-09 61.4 12.1 85 54-150 220-305 (320)
159 3gnn_A Nicotinate-nucleotide p 97.8 9.3E-05 3.2E-09 62.9 10.0 85 54-150 198-283 (298)
160 3ctl_A D-allulose-6-phosphate 97.8 0.0001 3.5E-09 60.4 9.6 119 51-175 44-218 (231)
161 4eiv_A Deoxyribose-phosphate a 97.8 0.00013 4.5E-09 61.6 10.3 88 47-139 132-252 (297)
162 1mxs_A KDPG aldolase; 2-keto-3 97.8 6.1E-05 2.1E-09 61.5 8.0 89 53-153 109-199 (225)
163 3exr_A RMPD (hexulose-6-phosph 97.8 5.2E-05 1.8E-09 61.6 7.4 97 73-176 122-218 (221)
164 1tqx_A D-ribulose-5-phosphate 97.8 0.00079 2.7E-08 54.9 14.0 114 53-175 101-222 (227)
165 1o4u_A Type II quinolic acid p 97.7 4.6E-05 1.6E-09 64.4 6.6 87 53-151 180-271 (285)
166 2f6u_A GGGPS, (S)-3-O-geranylg 97.7 0.00011 3.7E-09 60.4 8.7 73 74-154 147-224 (234)
167 2h6r_A Triosephosphate isomera 97.7 0.00018 6E-09 58.3 9.6 89 64-153 111-204 (219)
168 3khj_A Inosine-5-monophosphate 97.7 0.00025 8.7E-09 61.7 10.8 94 48-148 79-173 (361)
169 1q6o_A Humps, 3-keto-L-gulonat 97.7 0.00035 1.2E-08 56.1 10.5 111 54-175 97-212 (216)
170 3nl6_A Thiamine biosynthetic b 97.7 0.00051 1.8E-08 62.8 12.7 80 73-153 116-214 (540)
171 1viz_A PCRB protein homolog; s 97.7 0.00015 5.2E-09 59.7 8.3 71 75-153 141-215 (240)
172 3lab_A Putative KDPG (2-keto-3 97.6 0.00014 4.8E-09 59.1 7.0 94 49-152 92-191 (217)
173 1hg3_A Triosephosphate isomera 97.6 0.00054 1.8E-08 55.9 10.4 101 52-153 47-210 (225)
174 3kts_A Glycerol uptake operon 97.6 4.7E-05 1.6E-09 60.8 4.0 45 107-153 140-184 (192)
175 1qpo_A Quinolinate acid phosph 97.6 0.00028 9.7E-09 59.5 8.7 86 54-151 183-272 (284)
176 3zen_D Fatty acid synthase; tr 97.5 3.7E-05 1.3E-09 82.0 3.8 89 64-154 543-652 (3089)
177 1w0m_A TIM, triosephosphate is 97.5 0.00071 2.4E-08 55.3 10.7 101 52-153 44-207 (226)
178 4gbu_A NADPH dehydrogenase 1; 97.5 0.00014 4.9E-09 64.0 6.9 102 50-153 223-353 (400)
179 4gj1_A 1-(5-phosphoribosyl)-5- 97.5 0.00029 1E-08 57.9 8.3 75 75-152 34-108 (243)
180 2czd_A Orotidine 5'-phosphate 97.5 0.00052 1.8E-08 54.8 9.2 80 78-174 125-205 (208)
181 4e38_A Keto-hydroxyglutarate-a 97.5 0.00061 2.1E-08 55.9 9.2 81 52-147 72-153 (232)
182 4fo4_A Inosine 5'-monophosphat 97.4 0.00087 3E-08 58.5 10.4 95 48-148 80-177 (366)
183 3s1x_A Probable transaldolase; 97.4 0.0043 1.5E-07 50.5 13.4 116 52-170 90-212 (223)
184 3lab_A Putative KDPG (2-keto-3 97.4 0.00088 3E-08 54.4 9.2 82 51-147 50-138 (217)
185 3ve9_A Orotidine-5'-phosphate 97.4 0.0005 1.7E-08 55.7 7.7 86 75-178 118-204 (215)
186 3q58_A N-acetylmannosamine-6-p 97.3 0.0018 6.1E-08 52.8 10.7 87 52-147 57-155 (229)
187 3igs_A N-acetylmannosamine-6-p 97.3 0.0018 6.3E-08 52.8 10.7 87 52-147 57-155 (232)
188 1to3_A Putative aldolase YIHT; 97.3 0.0017 5.9E-08 55.1 10.6 96 52-153 140-259 (304)
189 3r8r_A Transaldolase; pentose 97.3 0.0043 1.5E-07 50.1 12.2 102 52-156 88-194 (212)
190 3w01_A Heptaprenylglyceryl pho 97.2 0.0004 1.4E-08 57.0 5.5 47 105-153 173-219 (235)
191 4dbe_A Orotidine 5'-phosphate 97.2 0.0015 5E-08 53.1 8.9 87 75-179 125-212 (222)
192 3o07_A Pyridoxine biosynthesis 97.2 0.0011 3.7E-08 55.7 8.1 84 52-147 56-141 (291)
193 1jvn_A Glutamine, bifunctional 97.2 0.0005 1.7E-08 63.0 6.3 76 76-153 284-372 (555)
194 1vhc_A Putative KHG/KDPG aldol 97.1 0.0026 8.9E-08 51.7 9.2 81 52-147 55-136 (224)
195 1y0e_A Putative N-acetylmannos 97.1 0.0058 2E-07 48.7 11.1 94 52-150 44-148 (223)
196 1wbh_A KHG/KDPG aldolase; lyas 97.1 0.0026 9.1E-08 51.2 9.1 81 52-147 54-135 (214)
197 3iv3_A Tagatose 1,6-diphosphat 97.0 0.0056 1.9E-07 52.6 10.8 105 78-192 194-317 (332)
198 1mxs_A KDPG aldolase; 2-keto-3 97.0 0.0023 7.8E-08 52.1 7.9 81 52-147 64-145 (225)
199 2agk_A 1-(5-phosphoribosyl)-5- 97.0 0.0011 3.7E-08 55.1 6.0 68 75-153 41-108 (260)
200 1i4n_A Indole-3-glycerol phosp 97.0 0.0045 1.5E-07 51.2 9.7 89 52-149 89-179 (251)
201 1vc4_A Indole-3-glycerol phosp 96.9 0.0062 2.1E-07 50.3 10.2 72 75-152 68-139 (254)
202 1ypf_A GMP reductase; GUAC, pu 96.9 0.0061 2.1E-07 52.2 10.1 95 47-148 78-177 (336)
203 3r2g_A Inosine 5'-monophosphat 96.8 0.0063 2.1E-07 52.9 9.9 69 74-148 101-169 (361)
204 1vkf_A Glycerol uptake operon 96.8 0.0013 4.4E-08 52.2 4.9 104 47-154 40-183 (188)
205 3cpr_A Dihydrodipicolinate syn 96.8 0.0078 2.7E-07 50.9 10.1 92 76-170 41-137 (304)
206 2wkj_A N-acetylneuraminate lya 96.8 0.006 2.1E-07 51.6 9.4 95 76-173 36-135 (303)
207 3daq_A DHDPS, dihydrodipicolin 96.8 0.0058 2E-07 51.4 9.2 93 76-171 27-124 (292)
208 3flu_A DHDPS, dihydrodipicolin 96.8 0.0062 2.1E-07 51.3 9.3 92 76-170 32-128 (297)
209 2yxg_A DHDPS, dihydrodipicolin 96.8 0.0065 2.2E-07 51.0 9.2 92 76-170 25-121 (289)
210 3l21_A DHDPS, dihydrodipicolin 96.8 0.0057 1.9E-07 51.8 8.9 78 76-153 40-122 (304)
211 1f6k_A N-acetylneuraminate lya 96.8 0.0064 2.2E-07 51.1 9.2 93 76-171 28-126 (293)
212 2pgw_A Muconate cycloisomerase 96.8 0.02 6.7E-07 49.7 12.6 94 48-151 173-274 (384)
213 2ehh_A DHDPS, dihydrodipicolin 96.7 0.0066 2.2E-07 51.1 9.0 78 76-153 25-107 (294)
214 1xky_A Dihydrodipicolinate syn 96.7 0.006 2.1E-07 51.5 8.8 92 76-170 37-133 (301)
215 3qze_A DHDPS, dihydrodipicolin 96.7 0.0057 1.9E-07 52.1 8.6 92 76-170 48-144 (314)
216 3tak_A DHDPS, dihydrodipicolin 96.7 0.007 2.4E-07 50.8 8.9 92 76-170 26-122 (291)
217 2r8w_A AGR_C_1641P; APC7498, d 96.7 0.0065 2.2E-07 52.1 8.9 91 76-170 59-155 (332)
218 3tsm_A IGPS, indole-3-glycerol 96.7 0.011 3.6E-07 49.6 9.9 72 75-152 82-153 (272)
219 1vpx_A Protein (transaldolase 96.7 0.04 1.4E-06 44.9 13.1 106 64-172 113-223 (230)
220 2rfg_A Dihydrodipicolinate syn 96.7 0.0059 2E-07 51.5 8.4 92 76-170 25-121 (297)
221 3m5v_A DHDPS, dihydrodipicolin 96.7 0.0085 2.9E-07 50.6 9.3 78 76-153 32-115 (301)
222 3e96_A Dihydrodipicolinate syn 96.7 0.0046 1.6E-07 52.6 7.7 94 76-173 37-135 (316)
223 3si9_A DHDPS, dihydrodipicolin 96.7 0.0065 2.2E-07 51.8 8.5 92 76-170 47-143 (315)
224 2yw3_A 4-hydroxy-2-oxoglutarat 96.7 0.0095 3.2E-07 47.6 9.0 79 53-147 52-130 (207)
225 3fkr_A L-2-keto-3-deoxyarabona 96.6 0.0066 2.2E-07 51.5 8.4 77 76-152 33-114 (309)
226 3na8_A Putative dihydrodipicol 96.6 0.0057 1.9E-07 52.1 8.0 92 76-170 49-145 (315)
227 1zfj_A Inosine monophosphate d 96.6 0.0045 1.5E-07 55.4 7.6 68 75-148 235-302 (491)
228 3b4u_A Dihydrodipicolinate syn 96.6 0.0074 2.5E-07 50.8 8.5 95 76-172 28-127 (294)
229 1yxy_A Putative N-acetylmannos 96.6 0.019 6.7E-07 46.0 10.7 89 53-145 58-157 (234)
230 2ojp_A DHDPS, dihydrodipicolin 96.6 0.0061 2.1E-07 51.2 7.8 78 76-153 26-108 (292)
231 4af0_A Inosine-5'-monophosphat 96.6 0.0067 2.3E-07 55.2 8.4 69 75-149 283-351 (556)
232 1o5k_A DHDPS, dihydrodipicolin 96.6 0.0067 2.3E-07 51.4 7.9 78 76-153 37-119 (306)
233 3d0c_A Dihydrodipicolinate syn 96.6 0.0058 2E-07 52.0 7.5 92 76-172 37-134 (314)
234 3qfe_A Putative dihydrodipicol 96.6 0.0098 3.3E-07 50.7 8.9 78 76-153 36-118 (318)
235 2v9d_A YAGE; dihydrodipicolini 96.6 0.0077 2.6E-07 51.9 8.4 78 76-153 56-138 (343)
236 3m47_A Orotidine 5'-phosphate 96.5 0.0082 2.8E-07 48.8 7.8 81 77-175 142-223 (228)
237 2vc6_A MOSA, dihydrodipicolina 96.5 0.0079 2.7E-07 50.5 7.9 78 76-153 25-107 (292)
238 1mdl_A Mandelate racemase; iso 96.5 0.0079 2.7E-07 51.7 7.8 92 48-149 171-271 (359)
239 3s5o_A 4-hydroxy-2-oxoglutarat 96.4 0.011 3.8E-07 50.0 8.5 94 76-170 39-137 (307)
240 2v82_A 2-dehydro-3-deoxy-6-pho 96.4 0.016 5.6E-07 45.8 9.0 80 53-147 46-127 (212)
241 2ovl_A Putative racemase; stru 96.4 0.014 4.9E-07 50.3 9.2 92 48-149 173-273 (371)
242 4avf_A Inosine-5'-monophosphat 96.4 0.0098 3.4E-07 53.6 8.4 68 75-148 231-298 (490)
243 3dz1_A Dihydrodipicolinate syn 96.4 0.019 6.4E-07 48.8 9.7 93 76-173 33-130 (313)
244 3qja_A IGPS, indole-3-glycerol 96.4 0.02 6.8E-07 47.8 9.6 71 76-152 76-146 (272)
245 4fxs_A Inosine-5'-monophosphat 96.3 0.011 3.8E-07 53.3 8.3 69 74-148 232-300 (496)
246 3ffs_A Inosine-5-monophosphate 96.3 0.0074 2.5E-07 53.2 6.9 67 75-148 146-212 (400)
247 3eb2_A Putative dihydrodipicol 96.3 0.0045 1.6E-07 52.3 5.2 92 76-170 29-125 (300)
248 1l6w_A Fructose-6-phosphate al 96.3 0.081 2.8E-06 42.8 12.4 102 53-157 90-196 (220)
249 3h5d_A DHDPS, dihydrodipicolin 96.3 0.016 5.6E-07 49.1 8.6 78 76-153 32-115 (311)
250 4dpp_A DHDPS 2, dihydrodipicol 96.2 0.014 4.9E-07 50.7 8.0 92 76-170 84-180 (360)
251 3cu2_A Ribulose-5-phosphate 3- 96.2 0.0069 2.4E-07 49.6 5.6 100 52-153 106-222 (237)
252 3a5f_A Dihydrodipicolinate syn 96.2 0.0073 2.5E-07 50.7 5.9 78 76-153 26-108 (291)
253 1jcn_A Inosine monophosphate d 96.1 0.017 5.9E-07 52.1 8.4 68 75-148 257-324 (514)
254 3ru6_A Orotidine 5'-phosphate 96.0 0.022 7.4E-07 48.4 8.1 62 78-153 164-235 (303)
255 1wx0_A Transaldolase; structur 96.0 0.064 2.2E-06 43.5 10.6 91 64-157 110-203 (223)
256 2hmc_A AGR_L_411P, dihydrodipi 96.0 0.013 4.6E-07 50.5 6.8 92 76-171 51-146 (344)
257 3tfx_A Orotidine 5'-phosphate 96.0 0.041 1.4E-06 45.6 9.3 78 78-175 150-237 (259)
258 2zbt_A Pyridoxal biosynthesis 95.9 0.0042 1.4E-07 52.1 3.3 79 61-145 18-104 (297)
259 3usb_A Inosine-5'-monophosphat 95.9 0.041 1.4E-06 49.8 10.0 68 75-148 258-325 (511)
260 2gjl_A Hypothetical protein PA 95.9 0.059 2E-06 45.6 10.5 85 49-147 52-144 (328)
261 2nql_A AGR_PAT_674P, isomerase 95.9 0.016 5.5E-07 50.4 6.9 92 48-150 191-291 (388)
262 2rdx_A Mandelate racemase/muco 95.8 0.024 8.2E-07 49.1 7.8 89 48-149 171-268 (379)
263 2og9_A Mandelate racemase/muco 95.8 0.034 1.2E-06 48.4 8.8 93 48-150 189-290 (393)
264 1rvk_A Isomerase/lactonizing e 95.8 0.044 1.5E-06 47.3 9.2 93 48-150 182-284 (382)
265 2hzg_A Mandelate racemase/muco 95.7 0.07 2.4E-06 46.5 10.4 93 48-150 174-279 (401)
266 2qgy_A Enolase from the enviro 95.7 0.036 1.2E-06 48.2 8.5 90 49-148 177-275 (391)
267 3kts_A Glycerol uptake operon 95.7 0.013 4.4E-07 46.6 5.0 46 49-94 135-181 (192)
268 3tr2_A Orotidine 5'-phosphate 95.7 0.042 1.4E-06 45.0 8.2 78 78-175 150-237 (239)
269 1vrd_A Inosine-5'-monophosphat 95.6 0.033 1.1E-06 49.9 8.1 68 75-148 239-306 (494)
270 3ldv_A Orotidine 5'-phosphate 95.6 0.053 1.8E-06 44.8 8.5 77 78-174 168-254 (255)
271 4adt_A Pyridoxine biosynthetic 95.6 0.054 1.8E-06 45.8 8.6 84 59-145 16-104 (297)
272 3i4k_A Muconate lactonizing en 95.5 0.11 3.7E-06 45.1 10.5 92 48-149 176-276 (383)
273 3pm6_A Putative fructose-bisph 95.4 0.35 1.2E-05 40.9 13.2 113 73-185 172-297 (306)
274 3bo9_A Putative nitroalkan dio 95.4 0.083 2.8E-06 44.9 9.4 86 48-147 61-150 (326)
275 1nu5_A Chloromuconate cycloiso 95.4 0.09 3.1E-06 45.1 9.8 93 48-150 170-271 (370)
276 1eep_A Inosine 5'-monophosphat 95.4 0.05 1.7E-06 47.6 8.1 68 75-148 155-222 (404)
277 3q94_A Fructose-bisphosphate a 95.3 0.55 1.9E-05 39.4 14.1 110 73-184 159-285 (288)
278 1xg4_A Probable methylisocitra 95.3 0.072 2.5E-06 45.0 8.5 68 76-154 171-241 (295)
279 3ozy_A Putative mandelate race 95.3 0.052 1.8E-06 47.3 7.8 92 48-149 177-278 (389)
280 3iwp_A Copper homeostasis prot 95.2 0.23 7.9E-06 41.7 11.3 103 45-148 70-238 (287)
281 3ajx_A 3-hexulose-6-phosphate 95.2 0.33 1.1E-05 37.8 11.7 87 53-148 41-134 (207)
282 3ih1_A Methylisocitrate lyase; 95.1 0.15 5.1E-06 43.2 10.0 68 76-154 179-249 (305)
283 3f4w_A Putative hexulose 6 pho 95.1 0.43 1.5E-05 37.2 12.3 89 52-148 40-134 (211)
284 2p8b_A Mandelate racemase/muco 95.1 0.046 1.6E-06 47.0 7.0 93 48-150 167-269 (369)
285 4dwd_A Mandelate racemase/muco 95.1 0.098 3.4E-06 45.6 9.1 92 48-149 173-272 (393)
286 2nv1_A Pyridoxal biosynthesis 95.1 0.33 1.1E-05 40.6 12.0 90 52-146 9-105 (305)
287 4aaj_A N-(5'-phosphoribosyl)an 95.0 0.19 6.5E-06 40.8 10.0 91 52-151 103-205 (228)
288 1ea0_A Glutamate synthase [NAD 95.0 0.31 1.1E-05 49.2 13.3 119 76-194 591-724 (1479)
289 3iwp_A Copper homeostasis prot 95.0 0.084 2.9E-06 44.4 7.9 72 73-148 47-131 (287)
290 1gvf_A Tagatose-bisphosphate a 95.0 0.63 2.2E-05 39.0 13.3 110 73-184 155-281 (286)
291 1tkk_A Similar to chloromucona 95.0 0.14 4.9E-06 43.8 9.6 93 48-150 167-270 (366)
292 2pp0_A L-talarate/galactarate 94.9 0.087 3E-06 45.9 8.3 92 48-149 202-302 (398)
293 3go2_A Putative L-alanine-DL-g 94.9 0.059 2E-06 47.3 7.2 86 52-149 199-293 (409)
294 2z6i_A Trans-2-enoyl-ACP reduc 94.8 0.2 7E-06 42.4 10.2 86 48-147 47-136 (332)
295 1twd_A Copper homeostasis prot 94.8 0.14 5E-06 42.2 8.9 73 73-149 9-94 (256)
296 2i1o_A Nicotinate phosphoribos 94.8 0.19 6.6E-06 44.0 10.2 94 53-152 197-302 (398)
297 1eix_A Orotidine 5'-monophosph 94.8 0.084 2.9E-06 43.1 7.4 44 109-153 173-226 (245)
298 2c6q_A GMP reductase 2; TIM ba 94.8 0.091 3.1E-06 45.3 7.9 77 66-148 108-189 (351)
299 2qde_A Mandelate racemase/muco 94.8 0.11 3.6E-06 45.3 8.4 92 48-149 171-271 (397)
300 3mqt_A Mandelate racemase/muco 94.7 0.096 3.3E-06 45.6 7.9 92 48-149 182-283 (394)
301 1dbt_A Orotidine 5'-phosphate 94.7 0.082 2.8E-06 42.9 7.0 60 108-174 165-234 (239)
302 2yyu_A Orotidine 5'-phosphate 94.6 0.086 2.9E-06 43.0 7.1 60 109-175 167-236 (246)
303 2gdq_A YITF; mandelate racemas 94.6 0.12 4.2E-06 44.6 8.4 91 48-148 166-266 (382)
304 3stp_A Galactonate dehydratase 94.6 0.085 2.9E-06 46.4 7.4 92 50-151 214-314 (412)
305 2gl5_A Putative dehydratase pr 94.5 0.076 2.6E-06 46.3 6.9 89 50-148 202-299 (410)
306 2r91_A 2-keto-3-deoxy-(6-phosp 94.4 0.17 5.8E-06 42.2 8.6 92 76-171 23-118 (286)
307 2ps2_A Putative mandelate race 94.4 0.08 2.7E-06 45.5 6.7 90 48-150 172-271 (371)
308 3bw2_A 2-nitropropane dioxygen 94.3 0.5 1.7E-05 40.6 11.5 88 47-147 45-171 (369)
309 3mkc_A Racemase; metabolic pro 94.3 0.12 4.1E-06 45.0 7.7 92 48-149 187-288 (394)
310 1s2w_A Phosphoenolpyruvate pho 94.3 0.33 1.1E-05 40.8 10.1 71 76-154 174-244 (295)
311 3eez_A Putative mandelate race 94.3 0.18 6.3E-06 43.6 8.8 91 48-151 171-270 (378)
312 3jva_A Dipeptide epimerase; en 94.3 0.18 6E-06 43.2 8.6 94 48-151 165-267 (354)
313 3sjn_A Mandelate racemase/muco 94.3 0.15 5.1E-06 44.1 8.2 93 47-149 174-276 (374)
314 3rcy_A Mandelate racemase/muco 94.3 0.099 3.4E-06 46.2 7.1 91 50-150 187-286 (433)
315 2poz_A Putative dehydratase; o 94.2 0.079 2.7E-06 45.9 6.3 90 49-148 182-280 (392)
316 2o56_A Putative mandelate race 94.2 0.087 3E-06 45.9 6.6 89 50-148 199-296 (407)
317 3vk5_A MOEO5; TIM barrel, tran 94.2 0.071 2.4E-06 44.8 5.6 45 49-93 210-257 (286)
318 1chr_A Chloromuconate cycloiso 94.2 0.27 9.3E-06 42.2 9.6 92 48-149 170-270 (370)
319 2oz8_A MLL7089 protein; struct 94.1 0.41 1.4E-05 41.4 10.7 91 48-148 172-273 (389)
320 2isw_A Putative fructose-1,6-b 94.1 1.1 3.9E-05 38.1 13.1 110 73-184 153-304 (323)
321 1tzz_A Hypothetical protein L1 94.1 0.12 4.2E-06 44.7 7.3 91 48-148 192-295 (392)
322 2qdd_A Mandelate racemase/muco 94.1 0.88 3E-05 39.0 12.7 91 48-151 172-270 (378)
323 1w3i_A EDA, 2-keto-3-deoxy glu 94.0 0.19 6.7E-06 42.0 8.2 92 76-171 24-119 (293)
324 1nsj_A PRAI, phosphoribosyl an 94.0 0.13 4.6E-06 40.9 6.9 90 53-151 88-183 (205)
325 1wv2_A Thiazole moeity, thiazo 94.0 0.061 2.1E-06 44.6 4.9 42 52-93 175-217 (265)
326 1gox_A (S)-2-hydroxy-acid oxid 94.0 0.6 2.1E-05 40.2 11.5 91 56-149 114-254 (370)
327 4e5t_A Mandelate racemase / mu 94.0 0.086 2.9E-06 46.1 6.1 90 50-149 192-290 (404)
328 2ox4_A Putative mandelate race 93.9 0.085 2.9E-06 45.9 6.0 91 50-150 193-292 (403)
329 2nuw_A 2-keto-3-deoxygluconate 93.8 0.2 6.9E-06 41.7 7.8 91 76-170 24-118 (288)
330 3rr1_A GALD, putative D-galact 93.6 0.11 3.8E-06 45.5 6.2 89 51-149 163-260 (405)
331 3fs2_A 2-dehydro-3-deoxyphosph 93.6 0.41 1.4E-05 40.4 9.4 95 53-151 145-263 (298)
332 3ddm_A Putative mandelate race 93.6 0.25 8.5E-06 43.0 8.3 91 48-148 181-281 (392)
333 1zco_A 2-dehydro-3-deoxyphosph 93.6 0.55 1.9E-05 38.7 9.9 97 53-152 120-231 (262)
334 3r4e_A Mandelate racemase/muco 93.6 0.091 3.1E-06 46.2 5.5 88 52-149 206-302 (418)
335 3vcn_A Mannonate dehydratase; 93.5 0.12 4E-06 45.6 6.2 89 51-149 212-309 (425)
336 1vqt_A Orotidine 5'-phosphate 93.5 0.092 3.1E-06 42.0 5.0 58 77-153 131-197 (213)
337 1ofd_A Ferredoxin-dependent gl 93.5 1.2 4.1E-05 45.2 13.9 119 76-194 585-731 (1520)
338 3dip_A Enolase; structural gen 93.5 0.23 7.8E-06 43.5 8.0 89 51-148 198-295 (410)
339 1rvg_A Fructose-1,6-bisphospha 93.5 2.9 0.0001 35.2 14.5 110 73-184 153-302 (305)
340 3v3w_A Starvation sensing prot 93.4 0.1 3.5E-06 46.0 5.7 89 51-149 211-308 (424)
341 1xm3_A Thiazole biosynthesis p 93.4 0.1 3.5E-06 43.0 5.2 42 52-93 166-208 (264)
342 3sbf_A Mandelate racemase / mu 93.4 0.11 3.9E-06 45.3 5.7 89 51-149 186-283 (401)
343 3dg3_A Muconate cycloisomerase 93.3 0.28 9.5E-06 42.2 8.1 94 48-151 166-269 (367)
344 3bjs_A Mandelate racemase/muco 93.3 0.15 5E-06 45.0 6.4 91 48-148 211-311 (428)
345 3vzx_A Heptaprenylglyceryl pho 93.3 0.12 4E-06 42.1 5.3 41 52-93 167-209 (228)
346 1viz_A PCRB protein homolog; s 93.3 0.11 3.7E-06 42.6 5.2 41 52-93 169-211 (240)
347 1vr6_A Phospho-2-dehydro-3-deo 93.3 0.76 2.6E-05 39.6 10.7 128 53-183 203-347 (350)
348 4e4u_A Mandalate racemase/muco 93.3 0.13 4.6E-06 45.0 6.1 89 50-148 185-282 (412)
349 1vs1_A 3-deoxy-7-phosphoheptul 93.3 0.99 3.4E-05 37.5 11.1 96 53-151 135-245 (276)
350 1pii_A N-(5'phosphoribosyl)ant 93.2 0.18 6.2E-06 45.0 6.9 85 53-148 195-282 (452)
351 2qq6_A Mandelate racemase/muco 93.2 0.19 6.3E-06 43.9 6.9 90 50-149 194-292 (410)
352 3jr2_A Hexulose-6-phosphate sy 93.2 1.1 3.6E-05 35.5 10.9 86 53-147 47-138 (218)
353 1sjd_A N-acylamino acid racema 93.2 0.41 1.4E-05 40.9 8.9 90 48-147 165-262 (368)
354 3nvt_A 3-deoxy-D-arabino-heptu 93.1 0.77 2.6E-05 40.0 10.6 95 53-150 239-348 (385)
355 3tji_A Mandelate racemase/muco 93.0 0.16 5.3E-06 44.8 6.1 89 51-149 207-304 (422)
356 3ugv_A Enolase; enzyme functio 93.0 0.31 1.1E-05 42.3 8.0 93 48-150 201-302 (390)
357 2f6u_A GGGPS, (S)-3-O-geranylg 93.0 0.11 3.6E-06 42.5 4.6 41 52-93 177-219 (234)
358 3tj4_A Mandelate racemase; eno 92.9 0.32 1.1E-05 41.9 7.9 91 48-148 179-278 (372)
359 1zlp_A PSR132, petal death pro 92.9 0.58 2E-05 39.8 9.3 68 76-154 193-263 (318)
360 3mwc_A Mandelate racemase/muco 92.9 0.9 3.1E-05 39.5 10.8 93 48-150 187-287 (400)
361 3q45_A Mandelate racemase/muco 92.8 0.35 1.2E-05 41.6 8.0 92 48-149 166-266 (368)
362 3my9_A Muconate cycloisomerase 92.8 0.48 1.6E-05 40.8 8.8 91 50-150 175-274 (377)
363 3w01_A Heptaprenylglyceryl pho 92.7 0.14 4.8E-06 41.8 5.0 41 52-93 173-215 (235)
364 3sz8_A 2-dehydro-3-deoxyphosph 92.7 1.6 5.4E-05 36.5 11.5 129 53-183 124-278 (285)
365 2bdq_A Copper homeostasis prot 92.6 0.14 4.8E-06 41.5 4.7 70 73-149 9-97 (224)
366 3toy_A Mandelate racemase/muco 92.5 0.33 1.1E-05 42.1 7.5 92 48-149 195-295 (383)
367 1vli_A Spore coat polysacchari 92.5 0.75 2.6E-05 40.2 9.7 87 49-146 99-190 (385)
368 3nav_A Tryptophan synthase alp 92.5 0.14 4.9E-06 42.6 4.9 42 52-93 196-238 (271)
369 1qop_A Tryptophan synthase alp 92.5 0.23 7.7E-06 40.9 6.1 42 52-93 193-235 (268)
370 3g8r_A Probable spore coat pol 92.5 0.84 2.9E-05 39.3 9.8 81 55-146 82-166 (350)
371 2wqp_A Polysialic acid capsule 92.5 0.69 2.4E-05 39.9 9.3 84 53-147 93-180 (349)
372 4a29_A Engineered retro-aldol 92.4 0.6 2.1E-05 38.6 8.5 71 74-150 65-135 (258)
373 4dxk_A Mandelate racemase / mu 92.4 0.23 8E-06 43.2 6.4 91 49-149 193-292 (400)
374 2bdq_A Copper homeostasis prot 92.4 2.5 8.5E-05 34.1 12.0 48 45-92 32-96 (224)
375 1r0m_A N-acylamino acid racema 92.4 0.78 2.7E-05 39.3 9.6 90 49-148 173-269 (375)
376 1p4c_A L(+)-mandelate dehydrog 92.3 1.6 5.4E-05 37.8 11.5 41 105-148 213-253 (380)
377 2zc8_A N-acylamino acid racema 92.1 0.95 3.2E-05 38.6 9.8 91 49-149 166-263 (369)
378 3o63_A Probable thiamine-phosp 92.1 0.52 1.8E-05 38.4 7.8 78 55-150 87-164 (243)
379 3r8r_A Transaldolase; pentose 92.1 2 6.9E-05 34.3 11.0 111 53-182 41-156 (212)
380 2pcq_A Putative dihydrodipicol 92.0 0.41 1.4E-05 39.8 7.2 90 76-172 23-117 (283)
381 3t6c_A RSPA, putative MAND fam 92.0 0.36 1.2E-05 42.7 7.2 89 51-149 225-322 (440)
382 1rd5_A Tryptophan synthase alp 92.0 0.26 8.8E-06 40.2 5.8 42 52-93 189-231 (262)
383 3vav_A 3-methyl-2-oxobutanoate 92.0 2.1 7E-05 35.7 11.3 98 49-148 14-126 (275)
384 1me8_A Inosine-5'-monophosphat 91.9 0.33 1.1E-05 43.7 6.9 70 75-149 244-313 (503)
385 3vnd_A TSA, tryptophan synthas 91.7 0.2 6.8E-06 41.6 4.9 42 52-93 194-236 (267)
386 3ro6_B Putative chloromuconate 91.7 0.25 8.4E-06 42.3 5.6 94 48-151 166-269 (356)
387 2nli_A Lactate oxidase; flavoe 91.7 1 3.5E-05 38.9 9.6 82 64-148 132-257 (368)
388 1p0k_A Isopentenyl-diphosphate 91.7 1.6 5.4E-05 37.0 10.7 85 62-148 114-209 (349)
389 3sgz_A Hydroxyacid oxidase 2; 91.6 1.3 4.6E-05 38.1 10.1 90 56-148 112-245 (352)
390 3sr7_A Isopentenyl-diphosphate 91.6 0.78 2.7E-05 39.7 8.6 82 64-148 144-237 (365)
391 1v5x_A PRA isomerase, phosphor 91.5 0.28 9.5E-06 39.0 5.4 108 54-171 88-197 (203)
392 3eoo_A Methylisocitrate lyase; 91.5 1.2 4.1E-05 37.5 9.5 67 77-154 176-245 (298)
393 1o60_A 2-dehydro-3-deoxyphosph 91.5 1.7 5.9E-05 36.3 10.5 97 52-151 121-242 (292)
394 2ze3_A DFA0005; organic waste 91.4 1.2 4E-05 37.1 9.3 63 78-154 174-238 (275)
395 2wqp_A Polysialic acid capsule 91.4 2.8 9.7E-05 36.0 11.9 126 52-183 137-273 (349)
396 2zad_A Muconate cycloisomerase 91.3 1.6 5.6E-05 36.8 10.3 90 48-147 165-264 (345)
397 2hxt_A L-fuconate dehydratase; 91.3 0.44 1.5E-05 41.9 7.0 92 48-148 224-324 (441)
398 1h1y_A D-ribulose-5-phosphate 91.2 0.68 2.3E-05 36.9 7.4 92 50-150 50-147 (228)
399 3s1x_A Probable transaldolase; 91.2 2.1 7.1E-05 34.5 10.2 86 53-149 43-135 (223)
400 1wa3_A 2-keto-3-deoxy-6-phosph 91.1 0.99 3.4E-05 35.0 8.2 65 76-149 26-90 (205)
401 3lye_A Oxaloacetate acetyl hyd 91.1 1 3.6E-05 38.0 8.7 66 78-153 184-252 (307)
402 3noy_A 4-hydroxy-3-methylbut-2 91.0 3 0.0001 36.0 11.5 65 75-149 49-113 (366)
403 3tcs_A Racemase, putative; PSI 90.8 1.2 4E-05 38.7 9.1 89 52-150 185-282 (388)
404 2hjp_A Phosphonopyruvate hydro 90.8 1 3.4E-05 37.8 8.3 71 76-154 170-241 (290)
405 3vkj_A Isopentenyl-diphosphate 90.8 2.4 8.3E-05 36.5 11.0 83 63-147 118-217 (368)
406 1ujp_A Tryptophan synthase alp 90.7 0.35 1.2E-05 40.1 5.4 41 51-93 189-230 (271)
407 3tml_A 2-dehydro-3-deoxyphosph 90.6 1.4 4.9E-05 36.8 9.1 92 52-147 120-241 (288)
408 3hjz_A Transaldolase B; parach 90.6 1 3.4E-05 38.6 8.3 88 64-156 154-257 (334)
409 4e4f_A Mannonate dehydratase; 90.6 0.23 7.7E-06 43.8 4.4 87 53-149 215-310 (426)
410 2qkf_A 3-deoxy-D-manno-octulos 90.6 2.8 9.6E-05 34.8 10.9 98 52-152 118-240 (280)
411 2fli_A Ribulose-phosphate 3-ep 90.6 0.9 3.1E-05 35.5 7.5 72 75-149 19-92 (220)
412 3n9r_A Fructose-bisphosphate a 90.5 7.2 0.00025 32.9 13.9 110 73-184 155-304 (307)
413 3i6e_A Muconate cycloisomerase 90.2 1.4 4.7E-05 38.1 9.0 91 50-150 177-275 (385)
414 3fok_A Uncharacterized protein 90.1 0.92 3.2E-05 38.3 7.4 87 53-153 162-278 (307)
415 3fcp_A L-Ala-D/L-Glu epimerase 89.8 3.4 0.00012 35.4 11.2 91 50-150 177-276 (381)
416 3r0u_A Enzyme of enolase super 89.4 1.8 6E-05 37.4 9.0 94 48-151 168-272 (379)
417 3p3b_A Mandelate racemase/muco 89.4 0.59 2E-05 40.5 6.0 91 48-148 183-285 (392)
418 3eoo_A Methylisocitrate lyase; 89.3 5.6 0.00019 33.3 11.8 90 55-147 13-117 (298)
419 1vli_A Spore coat polysacchari 89.0 4.9 0.00017 34.9 11.5 123 52-178 147-280 (385)
420 4aaj_A N-(5'-phosphoribosyl)an 88.9 4.5 0.00015 32.5 10.6 78 65-148 19-99 (228)
421 3gd6_A Muconate cycloisomerase 88.9 1.4 4.8E-05 38.1 8.0 92 48-151 168-271 (391)
422 3fa4_A 2,3-dimethylmalate lyas 88.8 6 0.00021 33.2 11.6 93 55-147 8-114 (302)
423 2cu0_A Inosine-5'-monophosphat 88.8 0.57 1.9E-05 41.8 5.6 65 75-148 230-294 (486)
424 3dgb_A Muconate cycloisomerase 88.8 1.5 5.2E-05 37.7 8.2 91 50-150 178-277 (382)
425 1geq_A Tryptophan synthase alp 88.4 0.57 1.9E-05 37.5 4.9 42 52-93 179-221 (248)
426 3lye_A Oxaloacetate acetyl hyd 88.4 8.4 0.00029 32.4 12.2 95 53-147 13-122 (307)
427 2nwr_A 2-dehydro-3-deoxyphosph 88.3 2.8 9.4E-05 34.7 9.1 95 52-152 107-226 (267)
428 1o66_A 3-methyl-2-oxobutanoate 88.3 8.9 0.00031 31.8 12.2 94 52-147 5-114 (275)
429 1xi3_A Thiamine phosphate pyro 88.3 0.4 1.4E-05 37.3 3.8 44 50-93 148-191 (215)
430 1xky_A Dihydrodipicolinate syn 88.2 9.5 0.00032 31.7 12.5 40 54-93 69-115 (301)
431 1tx2_A DHPS, dihydropteroate s 88.2 1.8 6E-05 36.4 7.9 69 77-149 68-143 (297)
432 3fa4_A 2,3-dimethylmalate lyas 88.0 2.1 7.2E-05 36.1 8.3 67 78-154 176-245 (302)
433 3ih1_A Methylisocitrate lyase; 87.8 7.9 0.00027 32.5 11.7 90 55-147 20-123 (305)
434 1yad_A Regulatory protein TENI 87.7 0.56 1.9E-05 37.0 4.4 44 50-93 150-193 (221)
435 1m3u_A 3-methyl-2-oxobutanoate 87.6 8.2 0.00028 31.8 11.5 94 52-147 5-113 (264)
436 1xg4_A Probable methylisocitra 87.5 9.2 0.00032 31.9 11.9 90 55-147 8-113 (295)
437 1kbi_A Cytochrome B2, L-LCR; f 87.1 3.5 0.00012 37.1 9.7 41 105-148 331-371 (511)
438 3tr9_A Dihydropteroate synthas 87.0 3.3 0.00011 35.1 8.9 70 76-149 53-133 (314)
439 3tkf_A Transaldolase; structur 87.0 3.9 0.00013 35.1 9.4 100 52-156 163-281 (345)
440 3qw3_A Orotidine-5-phosphate d 86.9 2.1 7.1E-05 35.1 7.5 76 84-177 169-251 (255)
441 4hb7_A Dihydropteroate synthas 86.7 6 0.0002 32.8 10.1 68 77-146 35-106 (270)
442 1aj0_A DHPS, dihydropteroate s 86.7 3.1 0.00011 34.6 8.5 70 76-149 42-118 (282)
443 2htm_A Thiazole biosynthesis p 86.7 0.95 3.2E-05 37.5 5.2 42 52-93 164-208 (268)
444 1vs1_A 3-deoxy-7-phosphoheptul 86.7 3.7 0.00013 34.0 9.0 79 53-143 91-174 (276)
445 4dye_A Isomerase; enolase fami 86.7 2.3 7.9E-05 36.9 8.1 91 48-150 195-293 (398)
446 3tak_A DHDPS, dihydrodipicolin 86.5 8.2 0.00028 31.8 11.1 39 55-93 59-104 (291)
447 3b8i_A PA4872 oxaloacetate dec 86.4 6.6 0.00023 32.7 10.4 92 55-147 12-116 (287)
448 2ekc_A AQ_1548, tryptophan syn 86.4 1.1 3.8E-05 36.6 5.6 41 52-93 194-235 (262)
449 2nzl_A Hydroxyacid oxidase 1; 86.4 3.1 0.0001 36.2 8.7 41 105-148 240-280 (392)
450 2i14_A Nicotinate-nucleotide p 86.4 3.2 0.00011 36.1 8.8 92 54-152 195-299 (395)
451 2yzr_A Pyridoxal biosynthesis 86.4 4.6 0.00016 34.4 9.5 83 59-147 12-102 (330)
452 1vkf_A Glycerol uptake operon 86.4 0.46 1.6E-05 37.4 3.1 41 49-93 136-178 (188)
453 2hjp_A Phosphonopyruvate hydro 86.3 9.1 0.00031 31.9 11.2 89 56-147 7-109 (290)
454 3g8r_A Probable spore coat pol 86.1 9.1 0.00031 32.8 11.3 129 52-184 124-262 (350)
455 1zco_A 2-dehydro-3-deoxyphosph 86.0 2.4 8.1E-05 34.9 7.4 75 53-139 76-151 (262)
456 1v5x_A PRA isomerase, phosphor 85.9 10 0.00036 29.7 10.9 78 68-148 2-82 (203)
457 3tha_A Tryptophan synthase alp 85.9 0.8 2.7E-05 37.6 4.4 41 52-93 187-228 (252)
458 1nvm_A HOA, 4-hydroxy-2-oxoval 85.9 3.4 0.00012 35.1 8.6 73 76-149 34-114 (345)
459 3ngj_A Deoxyribose-phosphate a 85.8 1.3 4.4E-05 36.2 5.5 76 76-151 99-180 (239)
460 3gr7_A NADPH dehydrogenase; fl 85.6 1.4 4.9E-05 37.4 6.1 43 50-92 263-307 (340)
461 1nsj_A PRAI, phosphoribosyl an 85.6 11 0.00037 29.6 10.9 78 68-148 3-83 (205)
462 2tps_A Protein (thiamin phosph 85.5 0.55 1.9E-05 36.9 3.2 44 50-93 157-201 (227)
463 2y5s_A DHPS, dihydropteroate s 85.3 5 0.00017 33.5 9.2 73 76-150 50-126 (294)
464 3zwt_A Dihydroorotate dehydrog 85.1 0.89 3E-05 39.3 4.5 42 52-93 284-328 (367)
465 3b8i_A PA4872 oxaloacetate dec 85.0 1.2 4.2E-05 37.2 5.2 68 76-154 172-240 (287)
466 1twd_A Copper homeostasis prot 84.9 14 0.00049 30.2 11.5 49 45-93 32-94 (256)
467 2rdx_A Mandelate racemase/muco 84.8 4.1 0.00014 34.8 8.6 83 52-140 225-309 (379)
468 3fs2_A 2-dehydro-3-deoxyphosph 84.5 6.7 0.00023 32.9 9.5 83 53-147 101-188 (298)
469 2yci_X 5-methyltetrahydrofolat 84.4 3.8 0.00013 33.8 8.0 62 76-146 38-105 (271)
470 1gte_A Dihydropyrimidine dehyd 84.4 8 0.00027 37.6 11.4 91 55-147 624-734 (1025)
471 1s2w_A Phosphoenolpyruvate pho 84.2 9.4 0.00032 31.9 10.4 90 55-147 10-113 (295)
472 3b0p_A TRNA-dihydrouridine syn 84.2 1.3 4.6E-05 37.7 5.3 41 51-92 183-225 (350)
473 3cq0_A Putative transaldolase 84.2 8.8 0.0003 32.7 10.3 100 52-156 148-265 (339)
474 2qiw_A PEP phosphonomutase; st 84.2 13 0.00043 30.3 11.0 90 55-147 11-112 (255)
475 3m16_A Transaldolase; dimer, m 84.1 5.4 0.00018 34.0 8.9 102 52-156 144-261 (329)
476 1u83_A Phosphosulfolactate syn 83.9 11 0.00038 31.2 10.5 95 47-149 78-193 (276)
477 1z41_A YQJM, probable NADH-dep 83.7 1.2 4.2E-05 37.7 4.7 42 51-92 264-307 (338)
478 3fv9_G Mandelate racemase/muco 83.6 4.7 0.00016 34.7 8.6 91 48-150 176-275 (386)
479 3oix_A Putative dihydroorotate 83.6 0.79 2.7E-05 39.3 3.5 42 52-93 261-305 (345)
480 2vef_A Dihydropteroate synthas 83.4 3.5 0.00012 34.8 7.4 68 76-147 37-111 (314)
481 1zlp_A PSR132, petal death pro 83.2 20 0.00067 30.3 12.6 90 56-147 31-135 (318)
482 3to5_A CHEY homolog; alpha(5)b 83.2 11 0.00037 27.3 11.0 94 50-151 22-118 (134)
483 4f3h_A Fimxeal, putative uncha 83.1 3.5 0.00012 32.8 7.1 89 54-146 147-239 (250)
484 1ep3_A Dihydroorotate dehydrog 83.1 1.3 4.6E-05 36.4 4.7 41 53-93 230-271 (311)
485 2vc6_A MOSA, dihydrodipicolina 83.1 9.9 0.00034 31.3 10.1 39 55-93 58-103 (292)
486 3s83_A Ggdef family protein; s 83.0 4.9 0.00017 32.0 8.0 91 52-146 141-235 (259)
487 1tv5_A Dhodehase, dihydroorota 83.0 1.1 3.9E-05 39.6 4.4 42 52-93 359-403 (443)
488 3dz1_A Dihydrodipicolinate syn 83.0 11 0.00037 31.5 10.4 40 54-93 65-110 (313)
489 1tqj_A Ribulose-phosphate 3-ep 82.5 0.8 2.7E-05 36.8 3.0 43 51-93 155-202 (230)
490 1vr6_A Phospho-2-dehydro-3-deo 82.0 4.6 0.00016 34.7 7.7 83 53-147 159-246 (350)
491 3h5d_A DHDPS, dihydrodipicolin 81.9 21 0.00072 29.7 12.8 40 54-93 64-111 (311)
492 2dqw_A Dihydropteroate synthas 81.7 5 0.00017 33.6 7.7 69 76-146 56-128 (294)
493 1jub_A Dihydroorotate dehydrog 81.4 1.8 6E-05 35.9 4.8 42 52-93 228-272 (311)
494 1eye_A DHPS 1, dihydropteroate 81.3 5.1 0.00017 33.2 7.6 72 76-149 33-108 (280)
495 1oy0_A Ketopantoate hydroxymet 81.2 22 0.00074 29.5 11.3 89 48-147 78-198 (281)
496 1o60_A 2-dehydro-3-deoxyphosph 81.2 5.6 0.00019 33.2 7.8 75 53-139 78-153 (292)
497 2qkf_A 3-deoxy-D-manno-octulos 81.1 6.1 0.00021 32.7 8.0 75 53-139 75-150 (280)
498 2vp8_A Dihydropteroate synthas 80.8 5.2 0.00018 33.9 7.5 69 76-148 69-144 (318)
499 1vyr_A Pentaerythritol tetrani 80.2 2.5 8.7E-05 36.2 5.5 42 51-92 281-323 (364)
500 3i65_A Dihydroorotate dehydrog 80.1 1.2 4.2E-05 39.1 3.5 42 52-93 331-375 (415)
No 1
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=100.00 E-value=1.9e-32 Score=240.44 Aligned_cols=182 Identities=17% Similarity=0.306 Sum_probs=154.9
Q ss_pred cCCcceecccCCCccccc-----CCCC-------cchhHHHhhhccCccc-cH-HHHHHHHHhcCCCEEEEec---cCHH
Q psy16780 14 VLSQYLLANFSGKLSQLS-----NTSD-------SSSLLAYITSQLDETI-NW-SDVTWLKTITKLPIVLKGI---LTAE 76 (202)
Q Consensus 14 ~p~~~~~~n~~~~~~~~~-----~~~~-------~~~~~~~~~~~~d~~~-~~-~~i~~i~~~~~~Pv~vK~~---~~~~ 76 (202)
.|++++++|+++....+. +++. -+.+||.+|+++|+++ .| +.|+++++.+++||++|++ .+++
T Consensus 142 ~P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e 221 (365)
T 3sr7_A 142 RPHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVK 221 (365)
T ss_dssp ---CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHH
T ss_pred CCCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHH
Confidence 499999999998654432 2333 3556899999999999 56 7999999999999999988 7999
Q ss_pred HHHHHHHcCCcEEEeeccCcCCC---------------CCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhC
Q psy16780 77 DAKIGVEMGASAIMVSNHGGRQL---------------DYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALG 141 (202)
Q Consensus 77 ~a~~l~~aG~d~I~v~~~gg~~~---------------~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~G 141 (202)
+++.+.++|+|+|+|+|+||+++ +++.|+...+.++ +.+..++|||++|||+++.|++|++++|
T Consensus 222 ~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v-~~~~~~ipvia~GGI~~g~Dv~KaLalG 300 (365)
T 3sr7_A 222 TIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNA-QPLMDKVEILASGGIRHPLDIIKALVLG 300 (365)
T ss_dssp HHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHH-GGGTTTSEEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHH-HHhcCCCeEEEeCCCCCHHHHHHHHHcC
Confidence 99999999999999999998864 5677888888876 3455589999999999999999999999
Q ss_pred CCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccccc
Q psy16780 142 AKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVVH 196 (202)
Q Consensus 142 Ad~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~ 196 (202)
||+|++||+|++++.+.|++++.++++.+++||+.+|.++|+++++||++.+++.
T Consensus 301 AdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~si~eL~~~~~~~ 355 (365)
T 3sr7_A 301 AKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAELRNVDYLL 355 (365)
T ss_dssp CSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCSSTGGGGGCCEEE
T ss_pred CCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccCCEEE
Confidence 9999999999998888999999999999999999999999999999999987663
No 2
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=5.4e-32 Score=236.15 Aligned_cols=154 Identities=54% Similarity=0.933 Sum_probs=146.3
Q ss_pred hccCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEE
Q psy16780 45 SQLDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYL 124 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia 124 (202)
...||.++|+.|+++++.+++||++|++.+.++++.+.++|+|+|+++||||+++++++++++.+.++++.+.+++|||+
T Consensus 198 ~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia 277 (352)
T 3sgz_A 198 LFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYM 277 (352)
T ss_dssp -CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEE
T ss_pred hccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEE
Confidence 66799999999999999999999999999999999999999999999999999999999999999999988877899999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccccccccccC
Q psy16780 125 DGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVVHETYYSK 202 (202)
Q Consensus 125 ~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~~~~~~~ 202 (202)
+|||+++.|++|++++|||+|++||+|++++.+.|++++.++++.+++||+.+|..+|+++++||++..++ |||
T Consensus 278 ~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~----y~k 351 (352)
T 3sgz_A 278 DGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQ----FSR 351 (352)
T ss_dssp ESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBS----SCC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhcch----hcc
Confidence 99999999999999999999999999999988889999999999999999999999999999999998874 665
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.97 E-value=4.2e-31 Score=232.44 Aligned_cols=159 Identities=38% Similarity=0.595 Sum_probs=148.7
Q ss_pred HHhhhccCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 41 AYITSQLDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 41 ~~~~~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
.++++++|+.++|+.|+++++.+++||++|++.++++++.+.++|+|+|+|+||||++.++++++++.+.++++.+++++
T Consensus 206 ~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~i 285 (368)
T 2nli_A 206 NNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRV 285 (368)
T ss_dssp ---CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSS
T ss_pred HhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCC
Confidence 34566779999999999999999999999999999999999999999999999999999999999999999998887789
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhcccccccc
Q psy16780 121 DVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVVHETY 199 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~~~~ 199 (202)
|||++|||+++.|++|++++|||+|++||+|++++.+.|.+++.++++.+++||+.+|.++|+.++++|++..+++..|
T Consensus 286 pVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~ 364 (368)
T 2nli_A 286 PIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDNPY 364 (368)
T ss_dssp CEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEEECTT
T ss_pred eEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccccEeeccc
Confidence 9999999999999999999999999999999999888899999999999999999999999999999999998877665
No 4
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.97 E-value=6.8e-31 Score=232.78 Aligned_cols=162 Identities=56% Similarity=0.956 Sum_probs=147.5
Q ss_pred hHHHhhhccCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 39 LLAYITSQLDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 39 ~~~~~~~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
+..++++++||++.|+.|+++++.+++||++|++.++++++.+.++|+|+|+|+||||++.++++++++.+.++++.+++
T Consensus 227 ~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~ 306 (392)
T 2nzl_A 227 LAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEG 306 (392)
T ss_dssp HHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTT
T ss_pred HHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCC
Confidence 34567778899999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccccccc
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVVHET 198 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~~~ 198 (202)
++|||++|||+++.|++|++++|||+|++||+|++++.+.|.+++.++++.+++||+.+|.++|+.+++||++..++..+
T Consensus 307 ~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~ 386 (392)
T 2nzl_A 307 KVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKNP 386 (392)
T ss_dssp SSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC---
T ss_pred CCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhCc
Confidence 89999999999999999999999999999999999988889999999999999999999999999999999999988776
Q ss_pred cc
Q psy16780 199 YY 200 (202)
Q Consensus 199 ~~ 200 (202)
|.
T Consensus 387 ~~ 388 (392)
T 2nzl_A 387 LA 388 (392)
T ss_dssp --
T ss_pred ch
Confidence 64
No 5
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.97 E-value=2.1e-29 Score=221.47 Aligned_cols=182 Identities=21% Similarity=0.295 Sum_probs=157.3
Q ss_pred ccCCcceecccCCCcccc-----c-----CCCC-------cchhHHHhhhccCcccc---HHHHHHHHHhcCCCEEEEec
Q psy16780 13 LVLSQYLLANFSGKLSQL-----S-----NTSD-------SSSLLAYITSQLDETIN---WSDVTWLKTITKLPIVLKGI 72 (202)
Q Consensus 13 ~~p~~~~~~n~~~~~~~~-----~-----~~~~-------~~~~~~~~~~~~d~~~~---~~~i~~i~~~~~~Pv~vK~~ 72 (202)
.+|+.++++|+++.+... . ++++ -+.+|+.+++++++++. ++.|+++++.+++||++|++
T Consensus 116 ~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~v 195 (368)
T 3vkj_A 116 VAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKES 195 (368)
T ss_dssp HCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECS
T ss_pred hCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeC
Confidence 489999999999854322 1 2233 34568899999999884 78999999999999999987
Q ss_pred ---cCHHHHHHHHHcCCcEEEeeccCcC---------C--------------CCCccchHHHHHHHHHHhCCCcEEEEec
Q psy16780 73 ---LTAEDAKIGVEMGASAIMVSNHGGR---------Q--------------LDYVPASIEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 73 ---~~~~~a~~l~~aG~d~I~v~~~gg~---------~--------------~~~~~~~~~~l~~i~~~~~~~ipiia~G 126 (202)
.++++|+.+.++|+|+|+|+|+||+ + .+++.|+..++.++++.++ ++|||++|
T Consensus 196 G~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~G 274 (368)
T 3vkj_A 196 GNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSG 274 (368)
T ss_dssp SSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEES
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEEC
Confidence 7999999999999999999999884 2 1236778888889888774 69999999
Q ss_pred CCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccccc
Q psy16780 127 GVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVVH 196 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~ 196 (202)
||+++.|++|++++|||+|++||+|++++. .|++++.++++.+.+||+.+|..+|+++++||++.+++.
T Consensus 275 GI~~~~d~~kal~lGA~~v~ig~~~l~~~~-~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~~l~~ 343 (368)
T 3vkj_A 275 GIRSGLDAAKAIALGADIAGMALPVLKSAI-EGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVI 343 (368)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEEcHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCCEEe
Confidence 999999999999999999999999998754 689999999999999999999999999999999887663
No 6
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.96 E-value=8.3e-29 Score=217.93 Aligned_cols=160 Identities=55% Similarity=0.970 Sum_probs=149.9
Q ss_pred hHHHhhhccCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 39 LLAYITSQLDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 39 ~~~~~~~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
+.+++++.+||.+.|+.++++++.+++||++|++.++++++.+.++|+|+|+|+||+|++.++++++++.+.++++.+++
T Consensus 200 ~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~ 279 (370)
T 1gox_A 200 LSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQG 279 (370)
T ss_dssp HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTT
T ss_pred HHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCC
Confidence 34578889999999999999999999999999999999999999999999999999999888888999999999988877
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccccccc
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVVHET 198 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~~~ 198 (202)
++|||++|||+++.|+.|++++|||+|++||+|++++.+.|.+++.++++.+.+||+.+|.++|+.+++||++..+++..
T Consensus 280 ~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~~ 359 (370)
T 1gox_A 280 RIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADW 359 (370)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETT
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcceeccc
Confidence 89999999999999999999999999999999999887888999999999999999999999999999999999876543
No 7
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.96 E-value=5.1e-29 Score=227.30 Aligned_cols=160 Identities=43% Similarity=0.706 Sum_probs=147.3
Q ss_pred HHhhhccCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh----
Q psy16780 41 AYITSQLDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV---- 116 (202)
Q Consensus 41 ~~~~~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~---- 116 (202)
.++....||.++|+.|+++++.+++||++|++.++++++.+.++|+|+|+|+||||++++..+++++.+.++++.+
T Consensus 320 ~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~ 399 (511)
T 1kbi_A 320 RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRN 399 (511)
T ss_dssp GGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTT
T ss_pred HHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhc
Confidence 3445567899999999999999999999999999999999999999999999999999988888999999998877
Q ss_pred -CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhcccc
Q psy16780 117 -GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVV 195 (202)
Q Consensus 117 -~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~ 195 (202)
..++|||++|||+++.|++|++++|||+|+|||+|++++.+.|.+++.++++.+++||+.+|.++|+.++++|++..+.
T Consensus 400 ~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~ 479 (511)
T 1kbi_A 400 LKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLD 479 (511)
T ss_dssp CBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEE
T ss_pred cCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHhh
Confidence 3479999999999999999999999999999999999988889999999999999999999999999999999999877
Q ss_pred ccccc
Q psy16780 196 HETYY 200 (202)
Q Consensus 196 ~~~~~ 200 (202)
+..+.
T Consensus 480 ~~~~~ 484 (511)
T 1kbi_A 480 LSTLK 484 (511)
T ss_dssp CTTTT
T ss_pred hhhhh
Confidence 65543
No 8
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.96 E-value=6.9e-28 Score=212.76 Aligned_cols=158 Identities=37% Similarity=0.684 Sum_probs=146.6
Q ss_pred chhHHHhhhccCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 37 SSLLAYITSQLDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 37 ~~~~~~~~~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
+++..+.+...||++.|+.|+++++.+++||++|++.++++++.+.++|+|+|+|+||||++.++++++++.+.++++.+
T Consensus 198 ~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~ 277 (380)
T 1p4c_A 198 EMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT 277 (380)
T ss_dssp TTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH
T ss_pred hHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc
Confidence 44555666677999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccccc
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVVH 196 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~ 196 (202)
++|||++|||+++.|+.|++++|||+|++||+|++++.+.|.+++.++++.+.++|+.+|.++|+.++++|++..++.
T Consensus 278 --~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~~~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~ 355 (380)
T 1p4c_A 278 --GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGETGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQN 355 (380)
T ss_dssp --CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEEE
T ss_pred --CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeEEe
Confidence 569999999999999999999999999999999998777889999999999999999999999999999999997653
No 9
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.95 E-value=2.7e-27 Score=205.33 Aligned_cols=184 Identities=22% Similarity=0.252 Sum_probs=152.0
Q ss_pred hhhhhccccccCCcceecccCCCccc----cc-----CC-------CCcchhHHHhhhccCccc--cHHHHHHHHHhcCC
Q psy16780 4 YWMKSSLVCLVLSQYLLANFSGKLSQ----LS-----NT-------SDSSSLLAYITSQLDETI--NWSDVTWLKTITKL 65 (202)
Q Consensus 4 ~~~~~~~~~~~p~~~~~~n~~~~~~~----~~-----~~-------~~~~~~~~~~~~~~d~~~--~~~~i~~i~~~~~~ 65 (202)
.|.. ++-..|+.+.++|++..+.. +. ++ ++.+..++.++ .+++++ .++.++++++ +++
T Consensus 107 ~~~q--l~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n~~~~~~~-~~~~~~~~~~~~i~~vr~-~~~ 182 (332)
T 1vcf_A 107 RSFR--VRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNPLQEAVQ-RGDTDFRGLVERLAELLP-LPF 182 (332)
T ss_dssp HHHC--CTTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEECCHHHHHHT-TSCCCCTTHHHHHHHHCS-CSS
T ss_pred ceEE--eeccCCCceeecccChhhhhccChHHHHHHHhhcCCCceeeccchHHHHhc-CCCccHHHHHHHHHHHHc-CCC
Confidence 4543 33345788888888854321 11 11 22233456666 666665 4899999999 999
Q ss_pred CEEEEec---cCHHHHHHHHHcCCcEEEeeccCc---------CC---------CCCccchHHHHHHHHHHhCCCcEEEE
Q psy16780 66 PIVLKGI---LTAEDAKIGVEMGASAIMVSNHGG---------RQ---------LDYVPASIEALPEIAKAVGHKVDVYL 124 (202)
Q Consensus 66 Pv~vK~~---~~~~~a~~l~~aG~d~I~v~~~gg---------~~---------~~~~~~~~~~l~~i~~~~~~~ipiia 124 (202)
||++|++ .++++++.+.++|+|+|+++|||| ++ .++++++++.+.++++.++ ++|||+
T Consensus 183 Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia 261 (332)
T 1vcf_A 183 PVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVA 261 (332)
T ss_dssp CEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEE
T ss_pred CEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEE
Confidence 9999987 899999999999999999999987 43 5677889999999988774 699999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhcc
Q psy16780 125 DGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREM 193 (202)
Q Consensus 125 ~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~ 193 (202)
+|||+++.|+.|++++|||+|++||+|++.+ +.|++++.++++.+++||+.+|.++|+++++||++..
T Consensus 262 ~GGI~~~~d~~kal~~GAd~V~igr~~l~~~-~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~ 329 (332)
T 1vcf_A 262 SGGVYTGTDGAKALALGADLLAVARPLLRPA-LEGAERVAAWIGDYLEELRTALFAIGARNPKEARGRV 329 (332)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEECGGGHHHH-TTCHHHHHHHHHHHHHHHHHHHHHHTCSSGGGGTTCE
T ss_pred ECCCCCHHHHHHHHHhCCChHhhhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 9999999999999999999999999999987 7899999999999999999999999999999998763
No 10
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.94 E-value=5.1e-26 Score=198.35 Aligned_cols=182 Identities=19% Similarity=0.323 Sum_probs=142.2
Q ss_pred cCCcceecccCCCccccc-----CCCCc-------chhHHHhhhccCccc--cHHHHHHHHHhcCCCEEEEec---cCHH
Q psy16780 14 VLSQYLLANFSGKLSQLS-----NTSDS-------SSLLAYITSQLDETI--NWSDVTWLKTITKLPIVLKGI---LTAE 76 (202)
Q Consensus 14 ~p~~~~~~n~~~~~~~~~-----~~~~~-------~~~~~~~~~~~d~~~--~~~~i~~i~~~~~~Pv~vK~~---~~~~ 76 (202)
.|+.++++|++.....+. +...+ +..++.+++++++++ .++.++++++.+++||++|++ .+++
T Consensus 114 ~~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~ 193 (349)
T 1p0k_A 114 NPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKA 193 (349)
T ss_dssp CSSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHH
T ss_pred CCCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHH
Confidence 577888888874322211 11112 223445667788887 578999999999999999986 7899
Q ss_pred HHHHHHHcCCcEEEeeccCcC---------C-------CCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHh
Q psy16780 77 DAKIGVEMGASAIMVSNHGGR---------Q-------LDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALAL 140 (202)
Q Consensus 77 ~a~~l~~aG~d~I~v~~~gg~---------~-------~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~ 140 (202)
+++.+.++|+|+|+++||||+ + .++++++++.+.++++.+ +++|||++|||++++|+.|++++
T Consensus 194 ~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~ 272 (349)
T 1p0k_A 194 SAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDVAKAIAL 272 (349)
T ss_dssp HHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHc
Confidence 999999999999999999873 2 356678888899888776 57999999999999999999999
Q ss_pred CCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccccc
Q psy16780 141 GAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREMVVH 196 (202)
Q Consensus 141 GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~ 196 (202)
|||+|++||+|++...+.|++++.++++.+.++|+.+|.++|+.+++|+++.+++.
T Consensus 273 GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~~i~el~~~~~~~ 328 (349)
T 1p0k_A 273 GASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIADLQKAPLVI 328 (349)
T ss_dssp TCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBHHHHTTCCEEE
T ss_pred CCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhCCeec
Confidence 99999999999998767788899999999999999999999999999999987764
No 11
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.92 E-value=3.5e-25 Score=192.45 Aligned_cols=149 Identities=23% Similarity=0.264 Sum_probs=123.1
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEe-ccCHHHHHHHHHcCCcEEEeeccCcCCCC------Cccc--hHHHHHHHHHHhC
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKG-ILTAEDAKIGVEMGASAIMVSNHGGRQLD------YVPA--SIEALPEIAKAVG 117 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~~gg~~~~------~~~~--~~~~l~~i~~~~~ 117 (202)
+++...++.|+++++.++.|+++|. +.++++++.+.++|+|+|+++||+|++.+ .+.+ ++..+.++++.+
T Consensus 131 G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~- 209 (336)
T 1ypf_A 131 GHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA- 209 (336)
T ss_dssp CCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC-
T ss_pred CCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc-
Confidence 5777889999999999976666677 78999999999999999999999988653 2334 678899998877
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH--------------------HHhhhcChHHH--------------
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPAL--------------------WGLAHSGKSGV-------------- 163 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l--------------------~~~~~~G~~~v-------------- 163 (202)
++|||++|||+++.|++|++++|||+|++||+|+ +++.+.|.+++
T Consensus 210 -~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~~~~~~ 288 (336)
T 1ypf_A 210 -SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKMFVEHK 288 (336)
T ss_dssp -SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------CTTSCCSSSSCC
T ss_pred -CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhccCccccccceeeeccc
Confidence 8999999999999999999999999999999999 66665555544
Q ss_pred ---HHHHHHHHHHHHHHHHHhCCCCHHhhhhcccccc
Q psy16780 164 ---RKVLDILINEFDQALALSGCTSVGEIQREMVVHE 197 (202)
Q Consensus 164 ---~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~~~ 197 (202)
.++++.++.||+..|.++|+.+++||++.+++..
T Consensus 289 g~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~~ 325 (336)
T 1ypf_A 289 GSLEDTLIEMEQDLQSSISYAGGTKLDSIRTVDYVVV 325 (336)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTSSBGGGGGGCCEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHHhCcccHHHhCcCCEEEE
Confidence 4899999999999999999999999998866654
No 12
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.90 E-value=9.7e-24 Score=184.48 Aligned_cols=148 Identities=21% Similarity=0.194 Sum_probs=123.8
Q ss_pred cCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcC-----CCC-CccchHHHHHHHHHHhC-C
Q psy16780 47 LDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGR-----QLD-YVPASIEALPEIAKAVG-H 118 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~-----~~~-~~~~~~~~l~~i~~~~~-~ 118 (202)
+++...++.|+++|+.+ ++||++|.+.++++++.+.++|+|+|++++++|. +.+ .+.|++..+.++.+.++ .
T Consensus 143 g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~ 222 (351)
T 2c6q_A 143 GYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGL 222 (351)
T ss_dssp TTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhc
Confidence 56667889999999999 8999999999999999999999999999876653 122 24567777777765542 2
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH--------------------HhhhcC--------------hHH--
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW--------------------GLAHSG--------------KSG-- 162 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~--------------------~~~~~G--------------~~~-- 162 (202)
++|||++|||+++.|++|++++|||+|++||+|+. ++...| +++
T Consensus 223 ~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~~~~~~~~~g~~ 302 (351)
T 2c6q_A 223 KGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKT 302 (351)
T ss_dssp TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSSCCTTCCCCBCE
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhcccccccccccccceE
Confidence 69999999999999999999999999999999983 332211 356
Q ss_pred --------HHHHHHHHHHHHHHHHHHhCCCCHHhhhhccc
Q psy16780 163 --------VRKVLDILINEFDQALALSGCTSVGEIQREMV 194 (202)
Q Consensus 163 --------v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~ 194 (202)
+.++++.|+.||+..|.++|+.+++||++...
T Consensus 303 ~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~~ 342 (351)
T 2c6q_A 303 VEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTT 342 (351)
T ss_dssp EEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHCC
T ss_pred EEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCCc
Confidence 99999999999999999999999999988733
No 13
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=3e-22 Score=177.10 Aligned_cols=150 Identities=21% Similarity=0.267 Sum_probs=116.9
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeec--cCcCCCCC-ccchHHHHHHHHHH-------h
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSN--HGGRQLDY-VPASIEALPEIAKA-------V 116 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~--~gg~~~~~-~~~~~~~l~~i~~~-------~ 116 (202)
+++...|+.|+++++.+++||++|.+.++++++.+.++|+|+|++++ +++++.++ +++++..+.++++. +
T Consensus 194 ~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~ 273 (393)
T 2qr6_A 194 VNTGGEALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDET 273 (393)
T ss_dssp CCC-----CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhc
Confidence 34555778899999999999999999999999999999999999965 33343333 57888888888776 5
Q ss_pred CCC-cEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH-----------hhhcCh---H--------------HHHHHH
Q psy16780 117 GHK-VDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG-----------LAHSGK---S--------------GVRKVL 167 (202)
Q Consensus 117 ~~~-ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~-----------~~~~G~---~--------------~v~~~i 167 (202)
+.+ +|||++|||+++.|+.|++++|||+|++||+|+.. +.+.|. + .+.+++
T Consensus 274 ~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~ 353 (393)
T 2qr6_A 274 GGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQIL 353 (393)
T ss_dssp TSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC----CCCCHHHHH
T ss_pred CCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCceEEEecccCcccCCCccccccccccccchhHHHHh
Confidence 433 99999999999999999999999999999998643 222211 1 233333
Q ss_pred ----------HHHHHHHHHHHHHhCCCCHHhhhhccccc
Q psy16780 168 ----------DILINEFDQALALSGCTSVGEIQREMVVH 196 (202)
Q Consensus 168 ----------~~l~~~L~~~m~~~G~~~i~el~~~~~~~ 196 (202)
+.|+.||+..|.++|+++++||++.+++.
T Consensus 354 ~g~~~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~ 392 (393)
T 2qr6_A 354 HGPSTMPWGVENFEGGLKRALAKCGYTDLKSFQKVSLHV 392 (393)
T ss_dssp HCCCSCTTSSSCHHHHHHHHHHHHTCSBHHHHTTCCEEE
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhCCCCHHHHhhccEec
Confidence 36789999999999999999999987764
No 14
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.85 E-value=2e-20 Score=165.94 Aligned_cols=151 Identities=22% Similarity=0.299 Sum_probs=122.1
Q ss_pred hccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCC------CCCccchHHHHHHHHHHhC
Q psy16780 45 SQLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQ------LDYVPASIEALPEIAKAVG 117 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~ 117 (202)
..++|+..++.++++++.+ ++||+++.+.+.++++.+.++|+|+|+++.++|+. ...+.+++..+.++++.+.
T Consensus 174 ~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~ 253 (404)
T 1eep_A 174 AHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACN 253 (404)
T ss_dssp SCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHh
Confidence 4578888999999999999 89999998899999999999999999995544431 1123456777777776553
Q ss_pred -CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hh--------------------
Q psy16780 118 -HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LA-------------------- 156 (202)
Q Consensus 118 -~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~-------------------- 156 (202)
.++|||++|||+++.|+.+++++|||+|++||+|+.. +.
T Consensus 254 ~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~~g~~~~ 333 (404)
T 1eep_A 254 NTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNE 333 (404)
T ss_dssp TSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC-------------------------
T ss_pred hcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCCCCHHHHhhccccchhcccccc
Confidence 3799999999999999999999999999999999632 11
Q ss_pred -----hcChHH-------HHHHHHHHHHHHHHHHHHhCCCCHHhhhhcccc
Q psy16780 157 -----HSGKSG-------VRKVLDILINEFDQALALSGCTSVGEIQREMVV 195 (202)
Q Consensus 157 -----~~G~~~-------v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~~ 195 (202)
.+|.++ +.++++.+..+|+..|.++|+.+++||++..+.
T Consensus 334 ~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~~~~ 384 (404)
T 1eep_A 334 PKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKF 384 (404)
T ss_dssp -----------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCE
T ss_pred cccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCcE
Confidence 123333 889999999999999999999999999988544
No 15
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.83 E-value=8e-20 Score=180.57 Aligned_cols=153 Identities=23% Similarity=0.251 Sum_probs=127.2
Q ss_pred hhhccCccc-----cHHHHHHHHHhc-CCCEEEEecc---CHHHHHHHHHcCCcEEEeecc-CcCCC-------CCccch
Q psy16780 43 ITSQLDETI-----NWSDVTWLKTIT-KLPIVLKGIL---TAEDAKIGVEMGASAIMVSNH-GGRQL-------DYVPAS 105 (202)
Q Consensus 43 ~~~~~d~~~-----~~~~i~~i~~~~-~~Pv~vK~~~---~~~~a~~l~~aG~d~I~v~~~-gg~~~-------~~~~~~ 105 (202)
+++..++++ ..+.|+++|+.+ ++||++|++. ..+.|+.+.++|||+|+++|+ ||+.. +++.|+
T Consensus 966 isP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt 1045 (1479)
T 1ea0_A 966 ISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPW 1045 (1479)
T ss_dssp ECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCH
T ss_pred cCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhH
Confidence 455555555 246789999988 8999999985 367889999999999999998 44431 345677
Q ss_pred HHHHHHHHHHh-----CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhh-----------------------
Q psy16780 106 IEALPEIAKAV-----GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAH----------------------- 157 (202)
Q Consensus 106 ~~~l~~i~~~~-----~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~----------------------- 157 (202)
...|+++++.+ +.++|||++|||+++.|++|++++||++|++||+|+.++.|
T Consensus 1046 ~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~ 1125 (1479)
T 1ea0_A 1046 EMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLR 1125 (1479)
T ss_dssp HHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGG
T ss_pred HHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHH
Confidence 78888887764 34799999999999999999999999999999999987643
Q ss_pred ----cChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc-ccc
Q psy16780 158 ----SGKSGVRKVLDILINEFDQALALSGCTSVGEIQRE-MVV 195 (202)
Q Consensus 158 ----~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~-~~~ 195 (202)
.++++|.++++.+.+||+.+|..+|+++++||++. +++
T Consensus 1126 ~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~~~ll 1168 (1479)
T 1ea0_A 1126 QKFVGTPEKVVNLFTFLAEEVREILAGLGFRSLNEVIGRTDLL 1168 (1479)
T ss_dssp GSCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTCGGGE
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCchhee
Confidence 25789999999999999999999999999999554 554
No 16
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.83 E-value=6.8e-20 Score=181.41 Aligned_cols=155 Identities=21% Similarity=0.186 Sum_probs=128.2
Q ss_pred HhhhccCccc-----cHHHHHHHHHhc-CCCEEEEecc---CHHHHHHHHHcCCcEEEeeccC-cCCC-------CCccc
Q psy16780 42 YITSQLDETI-----NWSDVTWLKTIT-KLPIVLKGIL---TAEDAKIGVEMGASAIMVSNHG-GRQL-------DYVPA 104 (202)
Q Consensus 42 ~~~~~~d~~~-----~~~~i~~i~~~~-~~Pv~vK~~~---~~~~a~~l~~aG~d~I~v~~~g-g~~~-------~~~~~ 104 (202)
.+++..++++ ..+.|+++|+.+ ++||++|++. ..+.|+.+.++|||+|+++|++ |+.. +++.|
T Consensus 1000 lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlP 1079 (1520)
T 1ofd_A 1000 LISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSP 1079 (1520)
T ss_dssp EECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCC
T ss_pred eeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchh
Confidence 3456666666 246899999988 8999999985 3678899999999999999984 4431 34567
Q ss_pred hHHHHHHHHHHh-----CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhh----------------------
Q psy16780 105 SIEALPEIAKAV-----GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAH---------------------- 157 (202)
Q Consensus 105 ~~~~l~~i~~~~-----~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~---------------------- 157 (202)
+...|+++++.+ +.++|||++|||+++.|++|++++||++|++||+|+.++.|
T Consensus 1080 t~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~Ch~~~CP~Gvatqdp~L 1159 (1520)
T 1ofd_A 1080 WELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERL 1159 (1520)
T ss_dssp HHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCGGGTCCTTSSSCCCHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhccCCCCCceeEeeCHHH
Confidence 778888887764 34799999999999999999999999999999999987643
Q ss_pred -----cChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhh-hccccc
Q psy16780 158 -----SGKSGVRKVLDILINEFDQALALSGCTSVGEIQ-REMVVH 196 (202)
Q Consensus 158 -----~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~-~~~~~~ 196 (202)
.++++|.++++.+.+||+.+|..+|+++++||+ +.+++.
T Consensus 1160 ~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dll~ 1204 (1520)
T 1ofd_A 1160 RQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLK 1204 (1520)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGGEE
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcceEEe
Confidence 267899999999999999999999999999996 445543
No 17
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.83 E-value=4.7e-20 Score=161.37 Aligned_cols=144 Identities=21% Similarity=0.316 Sum_probs=118.0
Q ss_pred ccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCC------CccchHHHHHHHHHHhCC
Q psy16780 46 QLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLD------YVPASIEALPEIAKAVGH 118 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~------~~~~~~~~l~~i~~~~~~ 118 (202)
.+.+...++.|+++|+.+ ++||++|.+.++++++.+.++|+|+|.|++++|+..+ .+.|++..+.++++.+
T Consensus 122 ~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~-- 199 (361)
T 3r2g_A 122 HAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRAD-- 199 (361)
T ss_dssp CCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSS--
T ss_pred CCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhC--
Confidence 345666789999999987 7999999999999999999999999999888775432 2345666777765543
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhh-------h-------------------------------cCh
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLA-------H-------------------------------SGK 160 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~-------~-------------------------------~G~ 160 (202)
. |||++|||+++.|+.|++++|||+|++||+|+.... . +|.
T Consensus 200 ~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~~~~~~~~eG~ 278 (361)
T 3r2g_A 200 R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMHEWKTAEGV 278 (361)
T ss_dssp S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTCCSTTCCSCCC
T ss_pred C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhccccccccCCcc
Confidence 2 999999999999999999999999999999874310 0 010
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 161 -------SGVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 161 -------~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
-.+.+++.++..+|+..|.++|+.+|+||+++
T Consensus 279 ~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 279 ATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp CEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHT
T ss_pred eeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhC
Confidence 13789999999999999999999999999665
No 18
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.82 E-value=3.4e-20 Score=168.84 Aligned_cols=151 Identities=17% Similarity=0.267 Sum_probs=122.2
Q ss_pred hccCccccHHHHHHHHHhc-C-CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcC-----CC-CCccchHHHHHHHHHHh
Q psy16780 45 SQLDETINWSDVTWLKTIT-K-LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGR-----QL-DYVPASIEALPEIAKAV 116 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~-~-~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~-----~~-~~~~~~~~~l~~i~~~~ 116 (202)
..+++...++.++++++.+ + +||+++.+.+.+.++.+.++|+|++.++.++|. .. ..+.|+..++.++.+.+
T Consensus 263 ~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~ 342 (503)
T 1me8_A 263 SDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAER 342 (503)
T ss_dssp SCCCSHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHH
T ss_pred ccCcccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHH
Confidence 3466777788899999987 5 999999999999999999999999999544432 12 23567888888876654
Q ss_pred CC-------CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hhh------------
Q psy16780 117 GH-------KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LAH------------ 157 (202)
Q Consensus 117 ~~-------~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~~------------ 157 (202)
+. ++|||++|||+++.|++||+++||++|++|++|+.. +++
T Consensus 343 ~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~ 422 (503)
T 1me8_A 343 NKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLG 422 (503)
T ss_dssp HHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC------
T ss_pred HHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccc
Confidence 32 599999999999999999999999999999999731 111
Q ss_pred --------cCh-------HHHHHHHHHHHHHHHHHHHHhCCCCHHhhhh-cccc
Q psy16780 158 --------SGK-------SGVRKVLDILINEFDQALALSGCTSVGEIQR-EMVV 195 (202)
Q Consensus 158 --------~G~-------~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~-~~~~ 195 (202)
+|. .++.++++.|..+|+..|.++|+.++++|++ ..++
T Consensus 423 ~~~~~~~~eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~ 476 (503)
T 1me8_A 423 GKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSKAKIT 476 (503)
T ss_dssp --------CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCCEE
T ss_pred cccceecccceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHhCCCEE
Confidence 111 3578999999999999999999999999987 3443
No 19
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.81 E-value=4.2e-19 Score=161.02 Aligned_cols=148 Identities=25% Similarity=0.369 Sum_probs=121.3
Q ss_pred ccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCC-----C-CCccchHHHHHHHHHHhCC
Q psy16780 46 QLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQ-----L-DYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~-----~-~~~~~~~~~l~~i~~~~~~ 118 (202)
.+++...++.++++++.+ ++||+++.+.+.++++.+.++|+|+|++++++|+. . ..+.|+...+.++++.++.
T Consensus 259 ~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~ 338 (494)
T 1vrd_A 259 HGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARK 338 (494)
T ss_dssp CCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhh
Confidence 456667899999999998 79999999999999999999999999998776531 1 1245677777777665432
Q ss_pred -CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH--------------------Hhh---------------------
Q psy16780 119 -KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW--------------------GLA--------------------- 156 (202)
Q Consensus 119 -~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~--------------------~~~--------------------- 156 (202)
++|||++|||+++.|+.|++++|||+|++||+|+. ++.
T Consensus 339 ~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~ 418 (494)
T 1vrd_A 339 YDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKF 418 (494)
T ss_dssp TTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC---------------------
T ss_pred cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccc
Confidence 79999999999999999999999999999999973 111
Q ss_pred -hcChH-------HHHHHHHHHHHHHHHHHHHhCCCCHHhhhhcc
Q psy16780 157 -HSGKS-------GVRKVLDILINEFDQALALSGCTSVGEIQREM 193 (202)
Q Consensus 157 -~~G~~-------~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~ 193 (202)
.+|.+ .+.++++.+..+|+..|.++|+.++++|++..
T Consensus 419 ~~~g~~~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~ 463 (494)
T 1vrd_A 419 VPEGIEGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEKA 463 (494)
T ss_dssp ----CBCCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHC
T ss_pred cCCcceEccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhhC
Confidence 12211 27899999999999999999999999998763
No 20
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.81 E-value=2.8e-19 Score=153.04 Aligned_cols=138 Identities=18% Similarity=0.225 Sum_probs=112.3
Q ss_pred CccccHHHHHHHHHhcCCCEEEEecc--CH----HHHHHHHHcCCcEEEeeccCc--CCCC--------------C---c
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGIL--TA----EDAKIGVEMGASAIMVSNHGG--RQLD--------------Y---V 102 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~--~~----~~a~~l~~aG~d~I~v~~~gg--~~~~--------------~---~ 102 (202)
+++..+++++++++.+++||++|+.. +. +.++.+.++|+|+|+++|+.+ ...+ + +
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg 221 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGG 221 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEES
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccc
Confidence 67777899999999999999999874 33 337888999999999988641 1111 0 2
Q ss_pred c----chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHH
Q psy16780 103 P----ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQAL 178 (202)
Q Consensus 103 ~----~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m 178 (202)
+ .+++.+.++++.+++++|||++|||+|++|+.+++++|||+|++||++++ +|+ .+++.+.++++.+|
T Consensus 222 ~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~----~~p----~~~~~i~~~l~~~l 293 (311)
T 1jub_A 222 AYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK----EGP----AIFDRIIKELEEIM 293 (311)
T ss_dssp GGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH----HCT----HHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh----cCc----HHHHHHHHHHHHHH
Confidence 1 13556777777666689999999999999999999999999999999996 355 57789999999999
Q ss_pred HHhCCCCHHhhhhcc
Q psy16780 179 ALSGCTSVGEIQREM 193 (202)
Q Consensus 179 ~~~G~~~i~el~~~~ 193 (202)
...|+++++|+++..
T Consensus 294 ~~~g~~si~e~~g~~ 308 (311)
T 1jub_A 294 NQKGYQSIADFHGKL 308 (311)
T ss_dssp HHHTCCSGGGTTTCC
T ss_pred HHcCCCCHHHHhChh
Confidence 999999999999863
No 21
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.80 E-value=3.2e-19 Score=152.93 Aligned_cols=137 Identities=21% Similarity=0.221 Sum_probs=112.8
Q ss_pred CccccHHHHHHHHHhcCCCEEEEecc--CHHH----HHHHHHcC-CcEEEeeccCcC--CCC-----------------C
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGIL--TAED----AKIGVEMG-ASAIMVSNHGGR--QLD-----------------Y 101 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~--~~~~----a~~l~~aG-~d~I~v~~~gg~--~~~-----------------~ 101 (202)
+++...++++++++.+++||++|+.. +.++ ++.+.++| +|+|+++|+.++ ..+ .
T Consensus 144 ~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~s 223 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLG 223 (314)
T ss_dssp SHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccC
Confidence 66777889999999999999999873 4444 78889999 999999886521 000 1
Q ss_pred c----cchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHH
Q psy16780 102 V----PASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQA 177 (202)
Q Consensus 102 ~----~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~ 177 (202)
+ +..++.+.++++.+ +++|||++|||+|++|+.+++++|||+|++||+++. +|+ .+++.++++++.+
T Consensus 224 g~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~----~~p----~~~~~i~~~l~~~ 294 (314)
T 2e6f_A 224 GKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQE----EGP----GIFTRLEDELLEI 294 (314)
T ss_dssp SGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHH----HCT----THHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHh----cCc----HHHHHHHHHHHHH
Confidence 1 12356778887777 689999999999999999999999999999999995 355 4778999999999
Q ss_pred HHHhCCCCHHhhhhcc
Q psy16780 178 LALSGCTSVGEIQREM 193 (202)
Q Consensus 178 m~~~G~~~i~el~~~~ 193 (202)
|...|+++++|+++..
T Consensus 295 ~~~~g~~~i~~~~g~~ 310 (314)
T 2e6f_A 295 MARKGYRTLEEFRGRV 310 (314)
T ss_dssp HHHHTCCSSTTTTTCC
T ss_pred HHHcCCCCHHHHhchH
Confidence 9999999999999863
No 22
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.80 E-value=3.5e-19 Score=162.36 Aligned_cols=146 Identities=24% Similarity=0.284 Sum_probs=115.0
Q ss_pred hccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCc-CC----C-CCccc---hHHHHHHHHH
Q psy16780 45 SQLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGG-RQ----L-DYVPA---SIEALPEIAK 114 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg-~~----~-~~~~~---~~~~l~~i~~ 114 (202)
..+++.+.++.++++++.+ ++||++|.+.+.+.++.+.++|+|+|+++.++| .. . ..+.+ .+..+.++++
T Consensus 276 ~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~ 355 (514)
T 1jcn_A 276 SQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYAR 355 (514)
T ss_dssp SCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHG
T ss_pred cCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHh
Confidence 4567777889999999998 899999999999999999999999999965533 21 1 12322 3344555555
Q ss_pred HhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hhh-----------------
Q psy16780 115 AVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LAH----------------- 157 (202)
Q Consensus 115 ~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~~----------------- 157 (202)
.+ ++|||++|||+++.|+.|++++|||+|++||+|+.. +..
T Consensus 356 ~~--~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~ 433 (514)
T 1jcn_A 356 RF--GVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSE 433 (514)
T ss_dssp GG--TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC----------------------------------
T ss_pred hC--CCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhccc
Confidence 55 799999999999999999999999999999988641 110
Q ss_pred ----cChHHH----------HHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 158 ----SGKSGV----------RKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 158 ----~G~~~v----------~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
.+++++ .++++.|..+|+..|.++|+++++||++.
T Consensus 434 ~~~~~~~~gv~~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 434 GDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp ----------------CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cccceecccceecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 012443 89999999999999999999999999985
No 23
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.80 E-value=3.7e-19 Score=162.31 Aligned_cols=147 Identities=21% Similarity=0.276 Sum_probs=118.0
Q ss_pred ccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCC------CCccchHHHHHHHHHHhCC
Q psy16780 46 QLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQL------DYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~------~~~~~~~~~l~~i~~~~~~ 118 (202)
.+++...++.++++++.+ ++||++|.+.+.+.++.+.++|+|+|.++.++|+.. ..+.|++..+.++++.++.
T Consensus 278 ~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~ 357 (511)
T 3usb_A 278 HGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARK 357 (511)
T ss_dssp CTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHT
T ss_pred ccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHh
Confidence 345666788999999998 489999999999999999999999999965544311 2346778888777665432
Q ss_pred -CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hhh--------------------
Q psy16780 119 -KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LAH-------------------- 157 (202)
Q Consensus 119 -~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~~-------------------- 157 (202)
++|||++|||+++.|+.|++++||++|++||+|+.. +.+
T Consensus 358 ~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~ 437 (511)
T 3usb_A 358 HGIPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKL 437 (511)
T ss_dssp TTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC--------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccc
Confidence 699999999999999999999999999999998532 111
Q ss_pred --cChH-------HHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 158 --SGKS-------GVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 158 --~G~~-------~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
+|.+ .+.++++.|..+|+..|.++|+.++++|+..
T Consensus 438 ~~eG~~~~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 438 VPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp --------CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred cCCCcEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHhC
Confidence 1222 2778999999999999999999999999875
No 24
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.79 E-value=9.9e-19 Score=155.29 Aligned_cols=140 Identities=17% Similarity=0.166 Sum_probs=114.4
Q ss_pred ccCccccHHHHHHHHHh--------------------cCCC-EEEEecc--C----HHHHHHHHHcCCcEEEeeccCcCC
Q psy16780 46 QLDETINWSDVTWLKTI--------------------TKLP-IVLKGIL--T----AEDAKIGVEMGASAIMVSNHGGRQ 98 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~--------------------~~~P-v~vK~~~--~----~~~a~~l~~aG~d~I~v~~~gg~~ 98 (202)
..|++...++++++++. .++| |+||+.. + .+.|+.+.++|+|+|+++|+...+
T Consensus 230 lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r 309 (415)
T 3i65_A 230 NQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQI 309 (415)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCC
T ss_pred ccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCccc
Confidence 45777788889988875 2689 9999984 3 355788999999999999976533
Q ss_pred CC--------C---cc----chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHH
Q psy16780 99 LD--------Y---VP----ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGV 163 (202)
Q Consensus 99 ~~--------~---~~----~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v 163 (202)
.+ + ++ .+++.++++++.+++++|||++|||+|++|+.+++.+|||+|++||++++ +|+
T Consensus 310 ~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~----~GP--- 382 (415)
T 3i65_A 310 NDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF----NGM--- 382 (415)
T ss_dssp CCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHH----HGG---
T ss_pred ccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh----cCH---
Confidence 21 1 22 24467888888887789999999999999999999999999999999986 356
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCHHhhhhcc
Q psy16780 164 RKVLDILINEFDQALALSGCTSVGEIQREM 193 (202)
Q Consensus 164 ~~~i~~l~~~L~~~m~~~G~~~i~el~~~~ 193 (202)
.+++.++++|+.+|...|+.+++|+++..
T Consensus 383 -~~~~~i~~~L~~~l~~~G~~si~e~~G~~ 411 (415)
T 3i65_A 383 -KSAVQIKRELNHLLYQRGYYNLKEAIGRK 411 (415)
T ss_dssp -GHHHHHHHHHHHHHHHTTCSSSTTTTTTT
T ss_pred -HHHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 46778999999999999999999999863
No 25
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.79 E-value=1.6e-18 Score=157.41 Aligned_cols=147 Identities=24% Similarity=0.342 Sum_probs=120.2
Q ss_pred ccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCC------CCCccchHHHHHHHHHHhC-
Q psy16780 46 QLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQ------LDYVPASIEALPEIAKAVG- 117 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~- 117 (202)
.+++....+.++++++.+ ++||+++.+.+.+.++.+.++|+|+|.++.++|.. ...+.+++..+.++++.++
T Consensus 251 ~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~ 330 (490)
T 4avf_A 251 HGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEG 330 (490)
T ss_dssp CCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT
T ss_pred CCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhcc
Confidence 445666788999999998 78999998999999999999999999996544432 1234678888888887763
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hhh--------------------
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LAH-------------------- 157 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~~-------------------- 157 (202)
.++|||++|||+++.|+.+++++||++|++||+|+.. +.+
T Consensus 331 ~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~ 410 (490)
T 4avf_A 331 TGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASA 410 (490)
T ss_dssp TTCCEEEESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC--------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhccccc
Confidence 3699999999999999999999999999999988641 111
Q ss_pred -------cChH-------HHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 158 -------SGKS-------GVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 158 -------~G~~-------~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
+|.+ .+.+++.+|..+|+..|.++|+.+++||+++
T Consensus 411 ~~~~~~~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 411 GAEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp -------------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred ccccccCCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 1111 4669999999999999999999999999876
No 26
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.79 E-value=2e-18 Score=152.93 Aligned_cols=148 Identities=21% Similarity=0.298 Sum_probs=118.3
Q ss_pred hccCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcC-----CC-CCccchHHHHHHHHHHhC-
Q psy16780 45 SQLDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGR-----QL-DYVPASIEALPEIAKAVG- 117 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~-----~~-~~~~~~~~~l~~i~~~~~- 117 (202)
..+++....+.|+++++.+++||+++.+.+.+.++.+.++|+|+|+++..+|. .. ..+.+++..+.++++.++
T Consensus 165 a~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~ 244 (400)
T 3ffs_A 165 AHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASK 244 (400)
T ss_dssp SCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTT
T ss_pred CCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHh
Confidence 45666667889999999889999999999999999999999999999543331 11 124578888888877653
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hhh--------------cC----
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LAH--------------SG---- 159 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~~--------------~G---- 159 (202)
.++|||++|||+++.|+.+++++||++|++||+|+.. +.+ ++
T Consensus 245 ~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~~~~~ry~~~~~~~~ 324 (400)
T 3ffs_A 245 FGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPEN 324 (400)
T ss_dssp TTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTSSCCEEESSSSEEEC--------------------------
T ss_pred cCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhccccchhhccccccc
Confidence 3799999999999999999999999999999998741 110 00
Q ss_pred ---hH----------HHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 160 ---KS----------GVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 160 ---~~----------~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
++ .+.+++.++..+||..|.++|+.+|+||+.+
T Consensus 325 ~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~~~y~G~~~i~el~~~ 370 (400)
T 3ffs_A 325 KMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 370 (400)
T ss_dssp ---------CEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred ccCCCCcEEecCCCCCHHHHHHHHHHHHHHhhhhcCcccHHHHHhC
Confidence 11 2678999999999999999999999999865
No 27
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.78 E-value=4e-18 Score=149.66 Aligned_cols=140 Identities=19% Similarity=0.175 Sum_probs=113.4
Q ss_pred ccCccccHHHHHHHHHh-------cCCCEEEEecc--C----HHHHHHHHHcCCcEEEeeccC-cCC---------CCCc
Q psy16780 46 QLDETINWSDVTWLKTI-------TKLPIVLKGIL--T----AEDAKIGVEMGASAIMVSNHG-GRQ---------LDYV 102 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~-------~~~Pv~vK~~~--~----~~~a~~l~~aG~d~I~v~~~g-g~~---------~~~~ 102 (202)
..+++...++++++++. +++||+||++. + .+.++.+.++|+|+|+++|+. ++. ..++
T Consensus 195 l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gG 274 (367)
T 3zwt_A 195 LQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGG 274 (367)
T ss_dssp GGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSE
T ss_pred cCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCC
Confidence 34666677788888764 68999999984 3 245788999999999999864 221 1121
Q ss_pred ---c----chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 103 ---P----ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 103 ---~----~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
+ .+++.++++++.+++++|||++|||+|++|+.+++.+|||+|++||++++ +|+ .+++.+.++|+
T Consensus 275 lSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~----~gP----~~~~~i~~~l~ 346 (367)
T 3zwt_A 275 LSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTF----WGP----PVVGKVKRELE 346 (367)
T ss_dssp EEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH----HCT----HHHHHHHHHHH
T ss_pred cCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHh----cCc----HHHHHHHHHHH
Confidence 2 24567888888887789999999999999999999999999999999986 366 46788999999
Q ss_pred HHHHHhCCCCHHhhhhcc
Q psy16780 176 QALALSGCTSVGEIQREM 193 (202)
Q Consensus 176 ~~m~~~G~~~i~el~~~~ 193 (202)
.+|...|+.+++|+++..
T Consensus 347 ~~m~~~G~~~i~e~~G~~ 364 (367)
T 3zwt_A 347 ALLKEQGFGGVTDAIGAD 364 (367)
T ss_dssp HHHHHTTCSSHHHHTTGG
T ss_pred HHHHHcCCCCHHHhhCcc
Confidence 999999999999999864
No 28
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.77 E-value=2.3e-18 Score=156.63 Aligned_cols=146 Identities=23% Similarity=0.297 Sum_probs=119.5
Q ss_pred cCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCC------CCccchHHHHHHHHHHhC-C
Q psy16780 47 LDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQL------DYVPASIEALPEIAKAVG-H 118 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~------~~~~~~~~~l~~i~~~~~-~ 118 (202)
+++....+.++++++.+ ++||+++.+.+.+.++.+.++|+|+|.+++++|... ..+.+++..+.++++.++ .
T Consensus 254 g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~ 333 (496)
T 4fxs_A 254 GHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY 333 (496)
T ss_dssp TTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG
T ss_pred ccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC
Confidence 45556778999999998 899999999999999999999999999975444221 234678888888877653 2
Q ss_pred CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhh-----------------------------------------
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAH----------------------------------------- 157 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~----------------------------------------- 157 (202)
++|||++|||+++.|+.|++++|||+|++||+|+....+
T Consensus 334 ~iPVIa~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~ 413 (496)
T 4fxs_A 334 GIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADK 413 (496)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCC
T ss_pred CCeEEEeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhcccccccccccccccc
Confidence 699999999999999999999999999999998742100
Q ss_pred ---cCh-------HHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 158 ---SGK-------SGVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 158 ---~G~-------~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
+|. ..+.+++.+|..+|+..|.++|+.+|+||+++
T Consensus 414 ~~~eg~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 414 LVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 458 (496)
T ss_dssp CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred ccCCccEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 010 24779999999999999999999999999865
No 29
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.77 E-value=3.9e-18 Score=149.50 Aligned_cols=148 Identities=21% Similarity=0.291 Sum_probs=118.2
Q ss_pred hccCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCC------CCCccchHHHHHHHHHHhC-
Q psy16780 45 SQLDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQ------LDYVPASIEALPEIAKAVG- 117 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~- 117 (202)
..+++....+.++++++.+++||+++.+.+++.++.+.++|+|+|.++.++|.. ...+.+++..+.++++...
T Consensus 126 a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~ 205 (361)
T 3khj_A 126 AHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASK 205 (361)
T ss_dssp SCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhh
Confidence 456777778899999998899999999999999999999999999996544421 1223567777777754331
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hhh--------------cC----
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LAH--------------SG---- 159 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~~--------------~G---- 159 (202)
.++|||++|||+++.|+.+++++|||+|++||+|+.. +.+ ++
T Consensus 206 ~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~~~~~~y~~~~~~~~ 285 (361)
T 3khj_A 206 FGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPEN 285 (361)
T ss_dssp HTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC-------------------------
T ss_pred cCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHhccchhhhhccccccc
Confidence 1799999999999999999999999999999988742 110 00
Q ss_pred ---hH----------HHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 160 ---KS----------GVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 160 ---~~----------~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
++ .+.+++.++..+||..|.++|+.+|+||+.+
T Consensus 286 ~~~~eg~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~ 331 (361)
T 3khj_A 286 KMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 331 (361)
T ss_dssp --------CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred ccCCCccEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhC
Confidence 11 2678999999999999999999999999865
No 30
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.77 E-value=6.7e-18 Score=151.39 Aligned_cols=123 Identities=19% Similarity=0.217 Sum_probs=100.9
Q ss_pred cCCC-EEEEecc--CH----HHHHHHHHcCCcEEEeeccCcCCCC--------C---cc----chHHHHHHHHHHhCCCc
Q psy16780 63 TKLP-IVLKGIL--TA----EDAKIGVEMGASAIMVSNHGGRQLD--------Y---VP----ASIEALPEIAKAVGHKV 120 (202)
Q Consensus 63 ~~~P-v~vK~~~--~~----~~a~~l~~aG~d~I~v~~~gg~~~~--------~---~~----~~~~~l~~i~~~~~~~i 120 (202)
.++| |++|+.. +. +.++.+.++|+|+|+++|+.....+ + ++ ..++.++++++.+++++
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 3689 9999984 33 3488999999999999997543221 1 11 13567788888887789
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhcc
Q psy16780 121 DVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQREM 193 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~ 193 (202)
|||++|||+|++|+.+++++|||+|++||++++ +|+ .+++.++++++.+|...|+++++|+++..
T Consensus 375 PVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~----~gP----~l~~~i~~~l~~~l~~~G~~si~e~~G~~ 439 (443)
T 1tv5_A 375 PIIASGGIFSGLDALEKIEAGASVCQLYSCLVF----NGM----KSAVQIKRELNHLLYQRGYYNLKEAIGRK 439 (443)
T ss_dssp CEEEESSCCSHHHHHHHHHTTEEEEEESHHHHH----HGG----GHHHHHHHHHHHHHHHHTCSSSGGGTTTT
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh----cCh----HHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 999999999999999999999999999999986 245 46788999999999999999999999874
No 31
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.76 E-value=3e-18 Score=149.78 Aligned_cols=137 Identities=20% Similarity=0.146 Sum_probs=110.3
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEecc--CHH----HHHHHHHcC-CcEEEeeccCc---------CC-------CCC--
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGIL--TAE----DAKIGVEMG-ASAIMVSNHGG---------RQ-------LDY-- 101 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~--~~~----~a~~l~~aG-~d~I~v~~~gg---------~~-------~~~-- 101 (202)
.||+...++++++++.+++||+||++. +.+ .++.+.++| +|+|+++|+.+ +. ..+
T Consensus 176 ~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGl 255 (354)
T 4ef8_A 176 YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGL 255 (354)
T ss_dssp GSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEE
T ss_pred cCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCC
Confidence 377888899999999999999999984 332 244555888 99999877531 10 011
Q ss_pred -c----cchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHH
Q psy16780 102 -V----PASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQ 176 (202)
Q Consensus 102 -~----~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~ 176 (202)
+ +..++.+.++++. .+++|||++|||+|++|+.+++.+|||+|++||++++ +|+ .+++.+.++|+.
T Consensus 256 SG~~i~p~a~~~i~~v~~~-~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~----~GP----~~~~~i~~~l~~ 326 (354)
T 4ef8_A 256 GGRYVLPTALANINAFYRR-CPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE----EGP----SIFERLTSELLG 326 (354)
T ss_dssp EGGGGHHHHHHHHHHHHHH-CTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHH----HCT----THHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHh-CCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHH----hCH----HHHHHHHHHHHH
Confidence 1 2356678888776 3479999999999999999999999999999999986 366 467889999999
Q ss_pred HHHHhCCCCHHhhhhc
Q psy16780 177 ALALSGCTSVGEIQRE 192 (202)
Q Consensus 177 ~m~~~G~~~i~el~~~ 192 (202)
+|...|+.+++|+++.
T Consensus 327 ~m~~~G~~si~el~G~ 342 (354)
T 4ef8_A 327 VMAKKRYQTLDEFRGK 342 (354)
T ss_dssp HHHHHTCCSGGGTTTC
T ss_pred HHHHcCCCCHHHHHHH
Confidence 9999999999999987
No 32
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.76 E-value=5.6e-18 Score=147.63 Aligned_cols=138 Identities=14% Similarity=0.157 Sum_probs=110.6
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEecc--C-HHHHHHHHHcCCcEEEeeccC-----------cC-CC--------CCcc
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGIL--T-AEDAKIGVEMGASAIMVSNHG-----------GR-QL--------DYVP 103 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~--~-~~~a~~l~~aG~d~I~v~~~g-----------g~-~~--------~~~~ 103 (202)
.||+...++++++++.+++||+||+.. + .+.++.+.++|+++|++.+.. .+ .. .+++
T Consensus 176 ~~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ 255 (345)
T 3oix_A 176 YDFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGD 255 (345)
T ss_dssp GCHHHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEG
T ss_pred CCHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCc
Confidence 477788889999999999999999984 3 466788888888877644321 11 01 0122
Q ss_pred c----hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHH
Q psy16780 104 A----SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALA 179 (202)
Q Consensus 104 ~----~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~ 179 (202)
+ .++.+.++++.+++++|||++|||+|++|+.+++.+|||+|++||+|++ .|+ .+++.+.++|+.+|.
T Consensus 256 ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~----~gP----~~~~~i~~~L~~~l~ 327 (345)
T 3oix_A 256 YVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQ----EGP----QIFKRITKELXAIMT 327 (345)
T ss_dssp GGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH----HCT----HHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHh----cCh----HHHHHHHHHHHHHHH
Confidence 2 3566788877776689999999999999999999999999999999775 366 477899999999999
Q ss_pred HhCCCCHHhhhhc
Q psy16780 180 LSGCTSVGEIQRE 192 (202)
Q Consensus 180 ~~G~~~i~el~~~ 192 (202)
..|+++++|+++.
T Consensus 328 ~~G~~si~e~~G~ 340 (345)
T 3oix_A 328 EKGYETLEDFRGK 340 (345)
T ss_dssp HHTCCSGGGTTTC
T ss_pred HcCCCCHHHHHhH
Confidence 9999999999986
No 33
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.74 E-value=1.1e-17 Score=146.89 Aligned_cols=148 Identities=23% Similarity=0.315 Sum_probs=118.4
Q ss_pred hccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCC------CCccchHHHHHHHHHHhC
Q psy16780 45 SQLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQL------DYVPASIEALPEIAKAVG 117 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~------~~~~~~~~~l~~i~~~~~ 117 (202)
..++++...+.|+++++.+ ++||+++.+.+++.++.+.++|+|+|.++..+|... ..+.+++..+.++++..+
T Consensus 129 a~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~ 208 (366)
T 4fo4_A 129 SHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVAN 208 (366)
T ss_dssp SCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHG
T ss_pred CCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHh
Confidence 3456666778899999988 899999989999999999999999999953333211 234577788888766432
Q ss_pred -CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hhh-------------------
Q psy16780 118 -HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LAH------------------- 157 (202)
Q Consensus 118 -~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~~------------------- 157 (202)
.++|||++|||+++.|+.+++++|||+|++||+|+.. +.+
T Consensus 209 ~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~~~~ry~~~~~~~ 288 (366)
T 4fo4_A 209 EYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAA 288 (366)
T ss_dssp GGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC-------------
T ss_pred hcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhcccccchhcccccc
Confidence 2799999999999999999999999999999998842 100
Q ss_pred -----cCh-------HHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 158 -----SGK-------SGVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 158 -----~G~-------~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
+|. -.+.+++.++..+||..|.++|+.+|+||+++
T Consensus 289 ~~~~~eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~ 335 (366)
T 4fo4_A 289 DKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 335 (366)
T ss_dssp --CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred ccccCCCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhC
Confidence 010 12779999999999999999999999999875
No 34
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.74 E-value=3.3e-17 Score=139.65 Aligned_cols=134 Identities=22% Similarity=0.234 Sum_probs=108.4
Q ss_pred CccccHHHHHHHHHhcCCCEEEEecc---C-HHHHHHHHHcCCcEEEeecc-------CcCCC---------CCccc---
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGIL---T-AEDAKIGVEMGASAIMVSNH-------GGRQL---------DYVPA--- 104 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~---~-~~~a~~l~~aG~d~I~v~~~-------gg~~~---------~~~~~--- 104 (202)
++++..++++++++.+++||++|+.. + .+.++.+.++|+|+|++++. ..+.. ..++.
T Consensus 148 ~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~ 227 (311)
T 1ep3_A 148 DPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKP 227 (311)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchH
Confidence 66777899999999989999999873 2 56689999999999999763 11110 01222
Q ss_pred -hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCC
Q psy16780 105 -SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGC 183 (202)
Q Consensus 105 -~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~ 183 (202)
.++.+.++++.+ ++|||++|||++++|+.+++++|||+|++||+|+. ++ ++++.++++++.+|...|+
T Consensus 228 ~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~-----~p----~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 228 VALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA-----DP----FVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp HHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHH-----CT----THHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHc-----Cc----HHHHHHHHHHHHHHHHcCC
Confidence 235566666655 79999999999999999999999999999999986 45 3667889999999999999
Q ss_pred CCHHhhhhc
Q psy16780 184 TSVGEIQRE 192 (202)
Q Consensus 184 ~~i~el~~~ 192 (202)
++++|+++.
T Consensus 297 ~~~~~~~g~ 305 (311)
T 1ep3_A 297 ESLESLIQE 305 (311)
T ss_dssp SCHHHHHHH
T ss_pred CCHHHHhCh
Confidence 999999875
No 35
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.74 E-value=1.4e-17 Score=150.77 Aligned_cols=149 Identities=17% Similarity=0.245 Sum_probs=120.6
Q ss_pred ccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCC-----C-CCccchHHHHHHHHHHhC-
Q psy16780 46 QLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQ-----L-DYVPASIEALPEIAKAVG- 117 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~-----~-~~~~~~~~~l~~i~~~~~- 117 (202)
.+++...++.++++++.+ ++|++.+.+.+.+.++.+.++|+|+|.+++.+|.. . ..+.++...+.+++....
T Consensus 255 ~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~ 334 (491)
T 1zfj_A 255 HGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVARE 334 (491)
T ss_dssp CTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHH
T ss_pred cCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhh
Confidence 356666788999999998 89999999999999999999999999997654431 1 224567777777765432
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hh---------------------
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LA--------------------- 156 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~--------------------- 156 (202)
.++|||++|||+++.|+.|++++||++|++|++|+.. +.
T Consensus 335 ~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~ 414 (491)
T 1zfj_A 335 YGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEA 414 (491)
T ss_dssp TTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------
T ss_pred cCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccc
Confidence 2799999999999999999999999999999999831 00
Q ss_pred ----hcCh-------HHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccc
Q psy16780 157 ----HSGK-------SGVRKVLDILINEFDQALALSGCTSVGEIQREMV 194 (202)
Q Consensus 157 ----~~G~-------~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~ 194 (202)
.+|. ..+.++++.+..+|+..|.++|+.++.+|+....
T Consensus 415 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~~ 463 (491)
T 1zfj_A 415 NKLVPEGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHENAQ 463 (491)
T ss_dssp CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCC
T ss_pred cccCcCcceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhcCc
Confidence 1121 1288999999999999999999999999987633
No 36
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.73 E-value=3.5e-17 Score=148.35 Aligned_cols=147 Identities=22% Similarity=0.301 Sum_probs=120.7
Q ss_pred ccCccccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcC----C--CCCccchHHHHHHHHHHhCC
Q psy16780 46 QLDETINWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGR----Q--LDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~----~--~~~~~~~~~~l~~i~~~~~~ 118 (202)
.++.....+.+++|++.+ ++||++..+.+.+.++.|.++|||+|.|+-.+|. . ..-+.|.+.++.++++....
T Consensus 303 hGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~ 382 (556)
T 4af0_A 303 QGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASR 382 (556)
T ss_dssp CCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGG
T ss_pred ccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHH
Confidence 567778899999999987 7999999999999999999999999999866552 1 12356788888887665432
Q ss_pred -CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------hhh--------------------
Q psy16780 119 -KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------LAH-------------------- 157 (202)
Q Consensus 119 -~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------~~~-------------------- 157 (202)
.+|||++|||+++.|++|||++|||+||+|+.|.-. +.+
T Consensus 383 ~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~ 462 (556)
T 4af0_A 383 FGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILG 462 (556)
T ss_dssp GTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------C
T ss_pred cCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCccccccccc
Confidence 699999999999999999999999999999977521 100
Q ss_pred -------------------cCh-------HHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 158 -------------------SGK-------SGVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 158 -------------------~G~-------~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
+|. -.+.+++.++..+||..|.++|+.+|+||+.+
T Consensus 463 ~~~~s~dRyfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~ 523 (556)
T 4af0_A 463 LDNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSC 523 (556)
T ss_dssp CSCSSEEECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred ccccchhhhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHh
Confidence 010 12789999999999999999999999999875
No 37
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.72 E-value=1.4e-17 Score=150.90 Aligned_cols=142 Identities=20% Similarity=0.274 Sum_probs=111.9
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCC-------CCccchHHHHHHH---HHHh
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQL-------DYVPASIEALPEI---AKAV 116 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~-------~~~~~~~~~l~~i---~~~~ 116 (202)
|......+.++++++.+++||++|.+.+++.++.+. |+|+|.+ +.|++.. ..+.++...+.++ ++.+
T Consensus 251 G~~~~~L~~I~~l~~~~~vpvi~k~v~~~~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~ 327 (486)
T 2cu0_A 251 AHNLKAIKSMKEMRQKVDADFIVGNIANPKAVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEY 327 (486)
T ss_dssp CCCHHHHHHHHHHHHTCCSEEEEEEECCHHHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred CcEeehhhHHHHHHHHhCCccccCCcCCHHHHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHc
Confidence 444446678899999999999999999999998888 9999999 4433221 2344555555544 3334
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH--------------------------hh--------------
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG--------------------------LA-------------- 156 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~--------------------------~~-------------- 156 (202)
++|||++|||+++.|++|++++|||+|++|++|+.. +.
T Consensus 328 --~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~ 405 (486)
T 2cu0_A 328 --GLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMK 405 (486)
T ss_dssp --TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCC
T ss_pred --CCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccc
Confidence 699999999999999999999999999999999831 10
Q ss_pred -----hcChH-------HHHHHHHHHHHHHHHHHHHhCCCCHHhhhhcc
Q psy16780 157 -----HSGKS-------GVRKVLDILINEFDQALALSGCTSVGEIQREM 193 (202)
Q Consensus 157 -----~~G~~-------~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~ 193 (202)
.+|.+ .+.++++.+..+|+..|.++|+.++.+|+...
T Consensus 406 ~~~~~~~g~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~~ 454 (486)
T 2cu0_A 406 TRKFVPEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKG 454 (486)
T ss_dssp CSCSSCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHC
T ss_pred cccccccceEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhhC
Confidence 12222 18899999999999999999999999998763
No 38
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.69 E-value=1.9e-16 Score=137.01 Aligned_cols=107 Identities=16% Similarity=0.107 Sum_probs=86.6
Q ss_pred cCccccHHHHHHHHHhc---------CCCEEEEecc--C----HHHHHHHHHcCCcEEEeeccC-cCC---------CCC
Q psy16780 47 LDETINWSDVTWLKTIT---------KLPIVLKGIL--T----AEDAKIGVEMGASAIMVSNHG-GRQ---------LDY 101 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~---------~~Pv~vK~~~--~----~~~a~~l~~aG~d~I~v~~~g-g~~---------~~~ 101 (202)
.++++.+++++++|+.+ ++||++|++. + .+.++.+.++|+|+|+++|++ ++. ..+
T Consensus 185 ~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~g 264 (336)
T 1f76_A 185 QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTG 264 (336)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSS
T ss_pred cCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCC
Confidence 35677889999999988 8999999874 3 344789999999999999864 221 011
Q ss_pred ---cc----chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 102 ---VP----ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 102 ---~~----~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
++ .+++.+.++++.+++++|||++|||+|++|+.+++++|||+|++||++++
T Consensus 265 g~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 265 GLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 21 23456778888887689999999999999999999999999999999986
No 39
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.66 E-value=2.1e-16 Score=136.02 Aligned_cols=144 Identities=20% Similarity=0.183 Sum_probs=112.4
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEecc------CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGIL------TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~~------~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+.++++.+++++++++.+++||++|++. +.+.++.+.++|+|+|+|+++...+...++++++.+.++++ +
T Consensus 108 ~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~----~ 183 (318)
T 1vhn_A 108 LKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK----R 183 (318)
T ss_dssp GSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC----S
T ss_pred hhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc----C
Confidence 3478899999999999999999999762 23789999999999999965322222234556665555533 8
Q ss_pred cEEEEecCCCCHHHHHHHHH-hCCCEEEEcHHHHH-----Hhhhc----Ch---HHHHHHHHHHHHHHHHHHHHhCCC-C
Q psy16780 120 VDVYLDGGVRYGTDVFKALA-LGAKMVFVGRPALW-----GLAHS----GK---SGVRKVLDILINEFDQALALSGCT-S 185 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~-~GAd~V~ig~~~l~-----~~~~~----G~---~~v~~~i~~l~~~L~~~m~~~G~~-~ 185 (202)
+|||++|||+|++|+.++++ .|||+|++||+++. ..... |. .++.+.++.+.++++..|...|.. .
T Consensus 184 ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 263 (318)
T 1vhn_A 184 IPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKA 263 (318)
T ss_dssp SCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHH
Confidence 99999999999999999999 79999999998653 11111 32 467788999999999999999964 6
Q ss_pred HHhhhhcc
Q psy16780 186 VGEIQREM 193 (202)
Q Consensus 186 i~el~~~~ 193 (202)
+.++++..
T Consensus 264 ~~~~~~~~ 271 (318)
T 1vhn_A 264 VVEMRKFL 271 (318)
T ss_dssp HHHHHTTH
T ss_pred HHHHHHHH
Confidence 77887763
No 40
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.64 E-value=1.4e-15 Score=148.39 Aligned_cols=136 Identities=18% Similarity=0.186 Sum_probs=111.4
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEeccC----HHHHHHHHHcCCcEEEeeccC-------------------cCCCCC--
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGILT----AEDAKIGVEMGASAIMVSNHG-------------------GRQLDY-- 101 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~~----~~~a~~l~~aG~d~I~v~~~g-------------------g~~~~~-- 101 (202)
.++++.+++++++++.+++||++|++.+ .+.++.+.++|+|+|+++|+. |+...+
T Consensus 686 ~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~ 765 (1025)
T 1gte_A 686 QDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGV 765 (1025)
T ss_dssp GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEE
T ss_pred cCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCC
Confidence 4778889999999999999999999843 466899999999999997631 111111
Q ss_pred -ccch----HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHH
Q psy16780 102 -VPAS----IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQ 176 (202)
Q Consensus 102 -~~~~----~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~ 176 (202)
+++. ++.+.++++.+ +++|||++|||+|++|+.+++++|||+|++||++++ .+. .+++.+.++|+.
T Consensus 766 sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~----~~~----~~~~~~~~~l~~ 836 (1025)
T 1gte_A 766 SGTAIRPIALRAVTTIARAL-PGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQN----QDF----TVIQDYCTGLKA 836 (1025)
T ss_dssp ESGGGHHHHHHHHHHHHHHS-TTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT----SCT----THHHHHHHHHHH
T ss_pred CcccchhHHHHHHHHHHHHc-CCCCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc----CCc----cHHHHHHHHHHH
Confidence 2222 35677887776 469999999999999999999999999999999985 244 467889999999
Q ss_pred HHHHhCCCCHHhhhh
Q psy16780 177 ALALSGCTSVGEIQR 191 (202)
Q Consensus 177 ~m~~~G~~~i~el~~ 191 (202)
+|...|+.+++++++
T Consensus 837 ~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 837 LLYLKSIEELQGWDG 851 (1025)
T ss_dssp HHHHTTCGGGTTSBT
T ss_pred HHHHcCCCCHHHHhC
Confidence 999999999999987
No 41
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.58 E-value=1.8e-14 Score=125.64 Aligned_cols=137 Identities=19% Similarity=0.110 Sum_probs=99.8
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEeccC--H----HHHHHHHHcC-CcEEEeeccCc--------C-----------CCC
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGILT--A----EDAKIGVEMG-ASAIMVSNHGG--------R-----------QLD 100 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~~--~----~~a~~l~~aG-~d~I~v~~~gg--------~-----------~~~ 100 (202)
.+++...++++++++.++.|+.+|.... . ..+..+.+.+ ++.+...++.. + +..
T Consensus 176 ~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGl 255 (354)
T 3tjx_A 176 YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGL 255 (354)
T ss_dssp TSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEE
T ss_pred cCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCccccccc
Confidence 4667778899999999999999998732 1 2233444443 44444332210 0 001
Q ss_pred CccchH----HHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHH
Q psy16780 101 YVPASI----EALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQ 176 (202)
Q Consensus 101 ~~~~~~----~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~ 176 (202)
++++.+ +.+.++++.+ .++|||++|||+|++|+++++.+|||+||++|+|++ +|+ .+++.++++|+.
T Consensus 256 SG~~~~~~a~~~v~~~~~~~-~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y----~GP----~~~~~I~~~L~~ 326 (354)
T 3tjx_A 256 GGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE----EGP----SIFERLTSELLG 326 (354)
T ss_dssp EGGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHH----HCT----THHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHhc-CCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhh----cCc----hHHHHHHHHHHH
Confidence 233333 3345555554 479999999999999999999999999999999986 477 467789999999
Q ss_pred HHHHhCCCCHHhhhhc
Q psy16780 177 ALALSGCTSVGEIQRE 192 (202)
Q Consensus 177 ~m~~~G~~~i~el~~~ 192 (202)
+|...|+++++|++++
T Consensus 327 ~L~~~G~~si~e~~G~ 342 (354)
T 3tjx_A 327 VMAKKRYQTLDEFRGK 342 (354)
T ss_dssp HHHHHTCCSGGGTTTC
T ss_pred HHHHcCCCCHHHHhCh
Confidence 9999999999999987
No 42
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.55 E-value=1.5e-13 Score=119.87 Aligned_cols=145 Identities=16% Similarity=0.190 Sum_probs=108.7
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEecc----------CHHHHHHHHHcCCcEEEeeccCcCC-CC------CccchHHH
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGIL----------TAEDAKIGVEMGASAIMVSNHGGRQ-LD------YVPASIEA 108 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~~----------~~~~a~~l~~aG~d~I~v~~~gg~~-~~------~~~~~~~~ 108 (202)
+.++++..++++++++.+++||++|.+. ..+.++.+.++|+|+|+++++...+ .. ..+.+++.
T Consensus 108 ~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~ 187 (350)
T 3b0p_A 108 LLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDW 187 (350)
T ss_dssp GGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHH
T ss_pred HhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHH
Confidence 4578889999999999999999999862 1466789999999999997642111 11 11236778
Q ss_pred HHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHh------h--hcC---hHHHHHHHHHHHHHHHHH
Q psy16780 109 LPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGL------A--HSG---KSGVRKVLDILINEFDQA 177 (202)
Q Consensus 109 l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~------~--~~G---~~~v~~~i~~l~~~L~~~ 177 (202)
+.++++.+ +++|||++|||+|++|+.++++ |||+|++||+++..- . ..| .....+.++.+.++++..
T Consensus 188 i~~ik~~~-~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 265 (350)
T 3b0p_A 188 VHRLKGDF-PQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEE 265 (350)
T ss_dssp HHHHHHHC-TTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 88888776 3799999999999999999998 999999999988520 0 112 224556778888888877
Q ss_pred HHHhCCCCHHhhhhccc
Q psy16780 178 LALSGCTSVGEIQREMV 194 (202)
Q Consensus 178 m~~~G~~~i~el~~~~~ 194 (202)
+. .|. .+..++++..
T Consensus 266 ~~-~g~-~~~~~~kh~~ 280 (350)
T 3b0p_A 266 VL-KGT-PPWAVLRHML 280 (350)
T ss_dssp HH-HTC-CHHHHHTTST
T ss_pred HH-cCc-cHHHHHHHHH
Confidence 77 466 6788877643
No 43
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.38 E-value=7e-12 Score=108.86 Aligned_cols=104 Identities=18% Similarity=0.148 Sum_probs=83.6
Q ss_pred CccccHHHHHHHHHhcCCCEEEEeccC------------HHHHHHHHHcCCcEEEeeccCcCC--CCCcc-chHHHHHHH
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGILT------------AEDAKIGVEMGASAIMVSNHGGRQ--LDYVP-ASIEALPEI 112 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~~------------~~~a~~l~~aG~d~I~v~~~gg~~--~~~~~-~~~~~l~~i 112 (202)
.+.+..++++++|+.++.||.||++.. .+.++.+.++|+|+|.+++..-.. ...++ ..++.+.++
T Consensus 193 R~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~i 272 (340)
T 3gr7_A 193 RYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELI 272 (340)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHH
Confidence 345678899999999999999999731 466889999999999998632111 11112 256677888
Q ss_pred HHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 113 AKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 113 ~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
++.+ ++|||++|||++++++.++++.| ||+|++||+++.
T Consensus 273 k~~~--~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 273 RREA--DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLR 312 (340)
T ss_dssp HHHT--TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred HHHc--CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHh
Confidence 8887 79999999999999999999999 999999999996
No 44
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.33 E-value=1.6e-11 Score=106.40 Aligned_cols=103 Identities=18% Similarity=0.155 Sum_probs=82.9
Q ss_pred ccccHHHHHHHHHhcCCCEEEEecc--------CH----HHHHHHHHcCCcEEEeeccCcC-C-CCCcc-chHHHHHHHH
Q psy16780 49 ETINWSDVTWLKTITKLPIVLKGIL--------TA----EDAKIGVEMGASAIMVSNHGGR-Q-LDYVP-ASIEALPEIA 113 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~Pv~vK~~~--------~~----~~a~~l~~aG~d~I~v~~~gg~-~-~~~~~-~~~~~l~~i~ 113 (202)
+.+..++++++|+.+++||.+|++. +. +.++.+.++|+|+|.+++.... + ....+ ..++.+.+++
T Consensus 194 ~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir 273 (338)
T 1z41_A 194 YRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIR 273 (338)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHH
Confidence 4557889999999999999999863 23 5578889999999999874211 1 11122 2456778888
Q ss_pred HHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 114 KAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 114 ~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
+.+ ++|||++|||++++++.++++.| ||+|++||+++.
T Consensus 274 ~~~--~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~ 312 (338)
T 1z41_A 274 EQA--DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLR 312 (338)
T ss_dssp HHH--CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred HHC--CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHh
Confidence 888 89999999999999999999998 999999999986
No 45
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.32 E-value=1.9e-11 Score=105.22 Aligned_cols=98 Identities=20% Similarity=0.287 Sum_probs=80.4
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeecc--CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNH--GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
.+.++++++. ++|++.+ +.+.++++.+.++|+|+|.+.+. ||+......+++..++++++.+ ++|||++|||++
T Consensus 108 ~~~~~~l~~~-gi~vi~~-v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~ 183 (328)
T 2gjl_A 108 GEHIAEFRRH-GVKVIHK-CTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFAD 183 (328)
T ss_dssp HHHHHHHHHT-TCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCS
T ss_pred HHHHHHHHHc-CCCEEee-CCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCC
Confidence 5688888875 8899865 57889999999999999999763 3332111246778888887766 799999999999
Q ss_pred HHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 131 GTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
++|+.+++++|||+|++||+|+..
T Consensus 184 ~~~v~~al~~GAdgV~vGs~~~~~ 207 (328)
T 2gjl_A 184 GRGLVAALALGADAINMGTRFLAT 207 (328)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHTS
T ss_pred HHHHHHHHHcCCCEEEECHHHHcC
Confidence 999999999999999999999864
No 46
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.31 E-value=1.7e-11 Score=100.67 Aligned_cols=100 Identities=20% Similarity=0.203 Sum_probs=79.6
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEec-----cCH----HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGI-----LTA----EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~-----~~~----~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
.++.+...+.++++++.++ |+++|.+ .+. +.++.+.++|+|+|..+. | ...+..+++.++.+++.+
T Consensus 98 ~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst-g---~~~gga~~~~i~~v~~~v 172 (225)
T 1mzh_A 98 SEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST-G---FAPRGTTLEEVRLIKSSA 172 (225)
T ss_dssp TTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC-S---CSSSCCCHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC-C---CCCCCCCHHHHHHHHHHh
Confidence 4566667778999999888 9999983 343 346888999999995543 2 122345778888888888
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
++++||+++|||+|++|+.+++.+|||.|++++.
T Consensus 173 ~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 173 KGRIKVKASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp TTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred CCCCcEEEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 7789999999999999999999999998888764
No 47
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.31 E-value=1.5e-11 Score=106.18 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=79.4
Q ss_pred HHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeecc--CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCH
Q psy16780 54 SDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNH--GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYG 131 (202)
Q Consensus 54 ~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~ 131 (202)
+.++++++ .++||++|. .+.+.++.+.++|+|+|.+++. ||+. +..+++..++++++.+ ++|||++|||+++
T Consensus 101 ~~i~~l~~-~g~~v~~~v-~~~~~a~~~~~~GaD~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~--~iPViaaGGI~~~ 174 (332)
T 2z6i_A 101 KYMERFHE-AGIIVIPVV-PSVALAKRMEKIGADAVIAEGMEAGGHI--GKLTTMTLVRQVATAI--SIPVIAAGGIADG 174 (332)
T ss_dssp GTHHHHHH-TTCEEEEEE-SSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSH
T ss_pred HHHHHHHH-cCCeEEEEe-CCHHHHHHHHHcCCCEEEEECCCCCCCC--CCccHHHHHHHHHHhc--CCCEEEECCCCCH
Confidence 46777776 489999885 6788999999999999999764 3321 2346778888888877 8999999999999
Q ss_pred HHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 132 TDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 132 ~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
+++.+++++|||+|++||+|+..
T Consensus 175 ~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 175 EGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp HHHHHHHHTTCSEEEECHHHHTB
T ss_pred HHHHHHHHcCCCEEEecHHHhcC
Confidence 99999999999999999999964
No 48
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.31 E-value=1.7e-11 Score=105.68 Aligned_cols=96 Identities=21% Similarity=0.292 Sum_probs=79.9
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeec--cCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSN--HGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~--~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
.+.++++++ .++||+++ +.+.+.++.+.++|+|+|.+++ .||+. +..+++..++++++.+ ++|||++|||++
T Consensus 114 ~~~~~~l~~-~g~~v~~~-v~s~~~a~~a~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~~i~~~~--~iPviaaGGI~~ 187 (326)
T 3bo9_A 114 TKYIRELKE-NGTKVIPV-VASDSLARMVERAGADAVIAEGMESGGHI--GEVTTFVLVNKVSRSV--NIPVIAAGGIAD 187 (326)
T ss_dssp HHHHHHHHH-TTCEEEEE-ESSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCS
T ss_pred HHHHHHHHH-cCCcEEEE-cCCHHHHHHHHHcCCCEEEEECCCCCccC--CCccHHHHHHHHHHHc--CCCEEEECCCCC
Confidence 457777776 47888864 5788999999999999999987 34432 2346788888888877 899999999999
Q ss_pred HHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 131 GTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
++|+.+++++||++|++||+|+..
T Consensus 188 ~~dv~~al~~GA~gV~vGs~~~~~ 211 (326)
T 3bo9_A 188 GRGMAAAFALGAEAVQMGTRFVAS 211 (326)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHTB
T ss_pred HHHHHHHHHhCCCEEEechHHHcC
Confidence 999999999999999999999964
No 49
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.28 E-value=9e-11 Score=96.80 Aligned_cols=101 Identities=15% Similarity=0.080 Sum_probs=81.0
Q ss_pred CccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCC-CCccchHHHHHHHHHHhCCCcEEEEec
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQL-DYVPASIEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~-~~~~~~~~~l~~i~~~~~~~ipiia~G 126 (202)
+|+...+.++.+++. +.++++ .+.+.++++.+.++|+|+|.+.++|.+.. ....++++.+.++++. ++|+|++|
T Consensus 114 ~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~G 188 (232)
T 3igs_A 114 RPVAVEALLARIHHH-HLLTMA-DCSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA---GCRVIAEG 188 (232)
T ss_dssp CSSCHHHHHHHHHHT-TCEEEE-ECCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT---TCCEEEES
T ss_pred CHHHHHHHHHHHHHC-CCEEEE-eCCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc---CCcEEEEC
Confidence 566677888888864 777776 46789999999999999997655443221 1234577888887663 79999999
Q ss_pred CCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 127 GVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
||++++|+.+++++||++|++|++++.
T Consensus 189 GI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 189 RYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp CCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 999999999999999999999999874
No 50
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.26 E-value=5.3e-11 Score=103.59 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=81.6
Q ss_pred ccccHHHHHHHHHhc--CCCEEEEecc--------CH----HHHHHHHHcCCcEEEeeccCcCC---CCCcc-chHHHHH
Q psy16780 49 ETINWSDVTWLKTIT--KLPIVLKGIL--------TA----EDAKIGVEMGASAIMVSNHGGRQ---LDYVP-ASIEALP 110 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~--~~Pv~vK~~~--------~~----~~a~~l~~aG~d~I~v~~~gg~~---~~~~~-~~~~~l~ 110 (202)
+.+..++++++|+.+ +.||.+|++. +. +.++.+.++|+|+|.+++.+-.. ....+ ..++.+.
T Consensus 202 ~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ 281 (349)
T 3hgj_A 202 MRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFAD 281 (349)
T ss_dssp HHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHH
Confidence 345688999999998 7899999973 33 34788899999999998532111 11111 3456678
Q ss_pred HHHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 111 EIAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 111 ~i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
++++.+ ++|||++|||++++++.++++.| ||+|++||+++.
T Consensus 282 ~ir~~~--~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 282 AVRKRV--GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp HHHHHH--CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred HHHHHc--CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh
Confidence 888877 79999999999999999999999 999999999996
No 51
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.26 E-value=1.1e-10 Score=94.73 Aligned_cols=99 Identities=21% Similarity=0.251 Sum_probs=79.6
Q ss_pred ccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCC--CC--ccchHHHHHHHHHHhCCCcEEEEe
Q psy16780 51 INWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQL--DY--VPASIEALPEIAKAVGHKVDVYLD 125 (202)
Q Consensus 51 ~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~--~~--~~~~~~~l~~i~~~~~~~ipiia~ 125 (202)
...+.++++++.+ +.++++ .+.++++++.+.++|+|+|.+++++.+.. +. ..+.++.++++++.+ ++||+++
T Consensus 105 ~~~~~i~~~~~~~~~~~v~~-~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~ 181 (223)
T 1y0e_A 105 TLDELVSYIRTHAPNVEIMA-DIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAE 181 (223)
T ss_dssp CHHHHHHHHHHHCTTSEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEE
T ss_pred CHHHHHHHHHHhCCCceEEe-cCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEe
Confidence 4467899999887 566655 55788899999999999998766543321 11 344667788888776 7999999
Q ss_pred cCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 126 GGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 126 GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
|||++++|+.+++++|||+|++||+++
T Consensus 182 GGI~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 182 GNVITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred cCCCCHHHHHHHHHcCCCEEEEChHHc
Confidence 999999999999999999999999976
No 52
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.25 E-value=1.1e-10 Score=96.12 Aligned_cols=101 Identities=17% Similarity=0.056 Sum_probs=80.7
Q ss_pred CccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCC-CCccchHHHHHHHHHHhCCCcEEEEec
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQL-DYVPASIEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~-~~~~~~~~~l~~i~~~~~~~ipiia~G 126 (202)
+|+...+.++.+++. +.++++ .+.+.++++.+.++|+|+|.+.++|.+.. ....++++.+.++++. ++|||++|
T Consensus 114 ~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~---~ipvIA~G 188 (229)
T 3q58_A 114 RPVDIDSLLTRIRLH-GLLAMA-DCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA---GCRVIAEG 188 (229)
T ss_dssp CSSCHHHHHHHHHHT-TCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT---TCCEEEES
T ss_pred ChHHHHHHHHHHHHC-CCEEEE-ecCCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc---CCCEEEEC
Confidence 566677888888864 777776 46789999999999999997655543221 1234577778877653 79999999
Q ss_pred CCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 127 GVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
||+|++|+.+++++||++|++|++++.
T Consensus 189 GI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 189 RYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp SCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 999999999999999999999999874
No 53
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.20 E-value=2e-10 Score=100.48 Aligned_cols=102 Identities=19% Similarity=0.075 Sum_probs=80.6
Q ss_pred cccHHHHHHHHHhc--CCCEEEEecc---------CH----HHHHHHHHcCCcEEEeeccCcCC---CCCcc-chHHHHH
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGIL---------TA----EDAKIGVEMGASAIMVSNHGGRQ---LDYVP-ASIEALP 110 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~~---------~~----~~a~~l~~aG~d~I~v~~~gg~~---~~~~~-~~~~~l~ 110 (202)
.+..++++++|+.+ ++||.+|++. +. +.++.+.++|+|+|.+++.+-.. ...++ ..++.+.
T Consensus 209 r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ 288 (363)
T 3l5l_A 209 RFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAE 288 (363)
T ss_dssp HHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHH
Confidence 45688999999998 6899999872 12 34788899999999998742111 11112 2456677
Q ss_pred HHHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 111 EIAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 111 ~i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
.+++.+ ++|||++|||++++++.++++.| ||+|++||+++.
T Consensus 289 ~ir~~~--~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 289 RVRREA--KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHHHHH--TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHc--CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh
Confidence 888877 79999999999999999999999 999999999996
No 54
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.16 E-value=4.4e-10 Score=98.27 Aligned_cols=99 Identities=23% Similarity=0.319 Sum_probs=78.9
Q ss_pred cHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeecc--Cc---CCCCCc------cchHHHHHHHHHHhCCCc
Q psy16780 52 NWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNH--GG---RQLDYV------PASIEALPEIAKAVGHKV 120 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~--gg---~~~~~~------~~~~~~l~~i~~~~~~~i 120 (202)
..+.++++++ .++||+++ +.+.++++.+.++|+|+|.+++. || +..... ..++..++++++.+ ++
T Consensus 134 ~~~~i~~~~~-~g~~v~~~-v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~i 209 (369)
T 3bw2_A 134 DREVIARLRR-AGTLTLVT-ATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DI 209 (369)
T ss_dssp CHHHHHHHHH-TTCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SS
T ss_pred cHHHHHHHHH-CCCeEEEE-CCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--Cc
Confidence 3678888887 47888875 56889999999999999999663 22 221111 23477788887776 89
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 121 DVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
|||+.|||++++++.+++++|||+|++||+|+..
T Consensus 210 PViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~ 243 (369)
T 3bw2_A 210 PVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLAT 243 (369)
T ss_dssp CEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred eEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 9999999999999999999999999999999853
No 55
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.13 E-value=5.8e-10 Score=96.95 Aligned_cols=103 Identities=17% Similarity=0.109 Sum_probs=80.3
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEecc--------CH----HHHHHHHHcCCcEEEeeccCcCCC--CCcc-chHHHHH
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGIL--------TA----EDAKIGVEMGASAIMVSNHGGRQL--DYVP-ASIEALP 110 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~~--------~~----~~a~~l~~aG~d~I~v~~~gg~~~--~~~~-~~~~~l~ 110 (202)
.+.+..++++++|+.+ ++||.+|++. +. +.++.+.++ +|+|.++..+-... ...+ ..++.+.
T Consensus 192 R~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3kru_A 192 RARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAE 270 (343)
T ss_dssp HTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHH
Confidence 3456789999999998 7899999873 22 446788889 99999964211110 0111 2456677
Q ss_pred HHHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 111 EIAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 111 ~i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
.+++.+ ++|||++|||++++++.++++.| ||+|++||+++.
T Consensus 271 ~ir~~~--~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 271 TIKKRC--NIKTSAVGLITTQELAEEILSNERADLVALGRELLR 312 (343)
T ss_dssp HHHHHH--TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHhc--CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhc
Confidence 888888 79999999999999999999998 999999999996
No 56
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.11 E-value=1.3e-09 Score=89.75 Aligned_cols=130 Identities=18% Similarity=0.156 Sum_probs=92.2
Q ss_pred hhhccCccccHHHHHHHHHhcCCCEEEEeccC-------HHHHHHHHHcCCcEEEeeccC--------------c-----
Q psy16780 43 ITSQLDETINWSDVTWLKTITKLPIVLKGILT-------AEDAKIGVEMGASAIMVSNHG--------------G----- 96 (202)
Q Consensus 43 ~~~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~-------~~~a~~l~~aG~d~I~v~~~g--------------g----- 96 (202)
++...+.....+.++++++.+++||.+....+ .+.++.+.++|+|+|++..-. |
T Consensus 59 l~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~ 138 (248)
T 1geq_A 59 LKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVF 138 (248)
T ss_dssp HHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEE
T ss_pred HHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEE
Confidence 33444556678899999999999999876433 478899999999999986311 0
Q ss_pred -----CC----------CC---------C--cc-----c-hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCE
Q psy16780 97 -----RQ----------LD---------Y--VP-----A-SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKM 144 (202)
Q Consensus 97 -----~~----------~~---------~--~~-----~-~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~ 144 (202)
+. .+ + +. + ..+.+.++++.+ ++||+++|||++++++.+++.+|||+
T Consensus 139 ~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~ 216 (248)
T 1geq_A 139 LAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANG 216 (248)
T ss_dssp EECTTCCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred EECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCE
Confidence 00 01 0 11 1 234566676665 79999999999999999999999999
Q ss_pred EEEcHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 145 VFVGRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 145 V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
|.+||+++.....+. +.+.++++.+++.|+
T Consensus 217 vivGsai~~~~~~~~-~~~~~~~~~~~~~~~ 246 (248)
T 1geq_A 217 VVVGSALVKIIGEKG-REATEFLKKKVEELL 246 (248)
T ss_dssp EEECHHHHHHHHHHG-GGCHHHHHHHHHHHH
T ss_pred EEEcHHHHhhHhhCh-HHHHHHHHHHHHHhc
Confidence 999999987532122 556666666655543
No 57
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.08 E-value=4.7e-10 Score=98.61 Aligned_cols=101 Identities=12% Similarity=-0.063 Sum_probs=77.7
Q ss_pred ccccHHHHHHHHHhcCC-CEEEEeccC---------------HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHH
Q psy16780 49 ETINWSDVTWLKTITKL-PIVLKGILT---------------AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEI 112 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~-Pv~vK~~~~---------------~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i 112 (202)
+.+..++++++|+.++- ||.+|++.. .+.++.+.++|+|+|.++++.-.+...+ ..++.+..+
T Consensus 216 ~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~i 294 (377)
T 2r14_A 216 ARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQM 294 (377)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHH
Confidence 34578899999999842 999998631 2447889999999999976421111111 145667788
Q ss_pred HHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 113 AKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 113 ~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
++.+ ++|||++||| +++++.++++.| ||+|++||+++.
T Consensus 295 k~~~--~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 295 RQRF--KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp HHHC--CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHC--CCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 8887 7999999999 699999999998 999999999996
No 58
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=99.08 E-value=1.8e-09 Score=91.05 Aligned_cols=102 Identities=14% Similarity=0.126 Sum_probs=81.6
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeeccCcC---------------------------------
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNHGGR--------------------------------- 97 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~gg~--------------------------------- 97 (202)
..+.++.+++.+++||+.|.- .++.++..+..+|||+|.+...--.
T Consensus 108 s~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~ 187 (272)
T 3tsm_A 108 APEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALK 187 (272)
T ss_dssp CHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh
Confidence 678999999999999999964 6777888899999999988642100
Q ss_pred -----------CCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 98 -----------QLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 98 -----------~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+..-.++++...++.+.++.++|+|+.|||++++|+.++..+||++|.+|+++++
T Consensus 188 ~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr 254 (272)
T 3tsm_A 188 LSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMR 254 (272)
T ss_dssp SCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHT
T ss_pred cCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcC
Confidence 00111234556667777777689999999999999999999999999999999996
No 59
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.08 E-value=8.9e-10 Score=96.45 Aligned_cols=99 Identities=14% Similarity=0.051 Sum_probs=78.4
Q ss_pred ccccHHHHHHHHHhcCC-CEEEEecc-----------CH----HHHHHHHHcCCcEEEeeccCcCCCCCcc-chHHHHHH
Q psy16780 49 ETINWSDVTWLKTITKL-PIVLKGIL-----------TA----EDAKIGVEMGASAIMVSNHGGRQLDYVP-ASIEALPE 111 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~-Pv~vK~~~-----------~~----~~a~~l~~aG~d~I~v~~~gg~~~~~~~-~~~~~l~~ 111 (202)
+.+..++++++|+.++- ||.+|++. +. +.++.+.++|+|+|.+++..- ++.+ ..++.+..
T Consensus 211 ~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~---~~~~~~~~~~~~~ 287 (365)
T 2gou_A 211 LRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW---DDAPDTPVSFKRA 287 (365)
T ss_dssp THHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT---TBCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc---CCCCCccHHHHHH
Confidence 44677899999998842 99999874 12 337889999999999987421 1111 13456778
Q ss_pred HHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 112 IAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 112 i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
+++.+ ++|||++||| +++++.++++.| ||+|++||+++.
T Consensus 288 i~~~~--~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 288 LREAY--QGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp HHHHC--CSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHC--CCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 88877 7999999999 999999999998 999999999996
No 60
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=99.06 E-value=1.6e-09 Score=91.37 Aligned_cols=102 Identities=19% Similarity=0.261 Sum_probs=79.5
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeecc--C--------------cC-----------------
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNH--G--------------GR----------------- 97 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~--g--------------g~----------------- 97 (202)
..+.++.+++.+++||+.|.. .++.++..+..+|+|+|.+... . |.
T Consensus 101 s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~ 180 (272)
T 3qja_A 101 SLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALK 180 (272)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 467999999999999999964 6777788899999999998421 0 10
Q ss_pred -----------CCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 98 -----------QLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 98 -----------~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+..-.++++.+.++++.++.++|+++.|||++++|+.++..+||++|.+|++++.
T Consensus 181 ~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~ 247 (272)
T 3qja_A 181 AGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVT 247 (272)
T ss_dssp HTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred CCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 00011234556666666665579999999999999999999999999999999985
No 61
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.06 E-value=8.6e-10 Score=98.23 Aligned_cols=103 Identities=10% Similarity=0.087 Sum_probs=80.5
Q ss_pred cccHHHHHHHHHhc------CCCEEEEecc----------CH----HHHHHHHH-cCCcEEEeeccCcCC--C---CCcc
Q psy16780 50 TINWSDVTWLKTIT------KLPIVLKGIL----------TA----EDAKIGVE-MGASAIMVSNHGGRQ--L---DYVP 103 (202)
Q Consensus 50 ~~~~~~i~~i~~~~------~~Pv~vK~~~----------~~----~~a~~l~~-aG~d~I~v~~~gg~~--~---~~~~ 103 (202)
.|..++++++|+.+ ++||.+|++. +. +.++.+.+ +|+|+|.|++.+... . ..+.
T Consensus 222 Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~ 301 (419)
T 3l5a_A 222 RLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGD 301 (419)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSST
T ss_pred HHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCc
Confidence 56788999999987 6899999863 22 45788889 999999998753210 1 1111
Q ss_pred -chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 104 -ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 104 -~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.....+..+++.+.+++|||++|||++++++.++++. ||+|++||+++.
T Consensus 302 ~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 302 HFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp TTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred cccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 2345667777777667999999999999999999999 999999999985
No 62
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.03 E-value=3e-09 Score=86.93 Aligned_cols=97 Identities=15% Similarity=0.140 Sum_probs=76.0
Q ss_pred ccHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEE--EeeccC-cCCCCCccchHHHHHHHHHHhCCCcEEEEec
Q psy16780 51 INWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAI--MVSNHG-GRQLDYVPASIEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 51 ~~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I--~v~~~g-g~~~~~~~~~~~~l~~i~~~~~~~ipiia~G 126 (202)
...+.++.+++.+ +.++++ .+.++++++.+.++|+|+| .+.+.. ++. ....++++.++++++. ++||+++|
T Consensus 119 ~~~~~i~~i~~~~~~~~v~~-~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~-~~~~~~~~~i~~~~~~---~ipvia~G 193 (234)
T 1yxy_A 119 DIASFIRQVKEKYPNQLLMA-DISTFDEGLVAHQAGIDFVGTTLSGYTPYSR-QEAGPDVALIEALCKA---GIAVIAEG 193 (234)
T ss_dssp CHHHHHHHHHHHCTTCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTSC-CSSSCCHHHHHHHHHT---TCCEEEES
T ss_pred cHHHHHHHHHHhCCCCeEEE-eCCCHHHHHHHHHcCCCEEeeeccccCCCCc-CCCCCCHHHHHHHHhC---CCCEEEEC
Confidence 4467999999887 667665 4568889999999999999 555431 221 1123466777777653 69999999
Q ss_pred CCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 127 GVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
||+|.+|+.+++++|||+|++||+++
T Consensus 194 GI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 194 KIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp CCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 99999999999999999999999886
No 63
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.03 E-value=2.3e-09 Score=93.80 Aligned_cols=100 Identities=11% Similarity=-0.060 Sum_probs=78.6
Q ss_pred ccccHHHHHHHHHhcC-CCEEEEeccC------------H----HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHH
Q psy16780 49 ETINWSDVTWLKTITK-LPIVLKGILT------------A----EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPE 111 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~-~Pv~vK~~~~------------~----~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~ 111 (202)
+.+..++++++|+.++ .||.+|++.. . +.++.+.++|+|+|.++++.-.+. ....++.+.+
T Consensus 211 ~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--~~~~~~~~~~ 288 (364)
T 1vyr_A 211 ARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG--KPYSEAFRQK 288 (364)
T ss_dssp THHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--CCCCHHHHHH
T ss_pred hhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC--CcccHHHHHH
Confidence 4467889999999983 3999998732 2 237889999999999986421111 1124566778
Q ss_pred HHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 112 IAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 112 i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
+++.+ ++|||++||| +++++.++++.| ||+|++||+++.
T Consensus 289 v~~~~--~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 289 VRERF--HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp HHHHC--CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHC--CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 88877 7999999999 999999999998 999999999986
No 64
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.03 E-value=1.2e-09 Score=96.82 Aligned_cols=102 Identities=12% Similarity=-0.016 Sum_probs=78.6
Q ss_pred ccccHHHHHHHHHhcC-CCEEEEeccC---------------HHHHHHHHHcC------CcEEEeeccCcCCCCCcc---
Q psy16780 49 ETINWSDVTWLKTITK-LPIVLKGILT---------------AEDAKIGVEMG------ASAIMVSNHGGRQLDYVP--- 103 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~-~Pv~vK~~~~---------------~~~a~~l~~aG------~d~I~v~~~gg~~~~~~~--- 103 (202)
+.+..+++++||+.++ .||.+|++.. .+.++.+.++| +|+|.+++....+....+
T Consensus 221 ~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~ 300 (402)
T 2hsa_B 221 CKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGR 300 (402)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTT
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCcccc
Confidence 5567889999999984 4999998631 24578889999 999999764211101011
Q ss_pred -----chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 104 -----ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 104 -----~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
..++.+..+++.+ ++|||++||| +++++.++++.| ||+|++||+++.
T Consensus 301 ~~~~~~~~~~~~~vk~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 301 LGSEEEEARLMRTLRNAY--QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp TTHHHHHHHHHHHHHHHC--SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ccCCcchHHHHHHHHHHC--CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh
Confidence 1345567777777 7999999999 999999999998 999999999986
No 65
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.01 E-value=6.9e-10 Score=97.54 Aligned_cols=102 Identities=16% Similarity=-0.032 Sum_probs=76.7
Q ss_pred ccccHHHHHHHHHhcCC-CEEEEecc---------------CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHH
Q psy16780 49 ETINWSDVTWLKTITKL-PIVLKGIL---------------TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEI 112 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~-Pv~vK~~~---------------~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i 112 (202)
+.+..++++++|+.++- ||.+|++. ..+.++.+.++|+|+|.+++..-.+.......+..+..+
T Consensus 217 ~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~v 296 (376)
T 1icp_A 217 CRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPM 296 (376)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHH
T ss_pred HHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHH
Confidence 45578899999999842 99999962 135578889999999999764211100011123445677
Q ss_pred HHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 113 AKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 113 ~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
++.+ ++|||++||| +++++.++++.| ||+|++||+++.
T Consensus 297 r~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 297 RKAY--KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp HHHC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHc--CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHh
Confidence 7777 7999999999 899999999987 999999999986
No 66
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.01 E-value=5.7e-09 Score=86.89 Aligned_cols=86 Identities=22% Similarity=0.190 Sum_probs=70.1
Q ss_pred CCCEEEEeccCHHHHHHHHHcCCcEEEeecc-CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCC
Q psy16780 64 KLPIVLKGILTAEDAKIGVEMGASAIMVSNH-GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGA 142 (202)
Q Consensus 64 ~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GA 142 (202)
++.|+.=...++..++++.++|+++|..-+. .|+. .+..+++.++.+++.. ++|||+.|||.+++|+.+++++||
T Consensus 135 Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG--~Gi~~~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~AmeLGA 210 (265)
T 1wv2_A 135 GFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSG--LGICNPYNLRIILEEA--KVPVLVDAGVGTASDAAIAMELGC 210 (265)
T ss_dssp TCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHHTC
T ss_pred CCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCC--CCcCCHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHHcCC
Confidence 6666644568899999999999999976443 2221 1345778888888865 899999999999999999999999
Q ss_pred CEEEEcHHHHH
Q psy16780 143 KMVFVGRPALW 153 (202)
Q Consensus 143 d~V~ig~~~l~ 153 (202)
|+|++|+++..
T Consensus 211 dgVlVgSAI~~ 221 (265)
T 1wv2_A 211 EAVLMNTAIAH 221 (265)
T ss_dssp SEEEESHHHHT
T ss_pred CEEEEChHHhC
Confidence 99999999974
No 67
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.98 E-value=2.8e-10 Score=97.12 Aligned_cols=131 Identities=21% Similarity=0.190 Sum_probs=85.4
Q ss_pred cHHHHHHHHHhcCCCEEEEecc-CHHHHHHHHHcCCcEEEeeccCc-----CCC--------------------------
Q psy16780 52 NWSDVTWLKTITKLPIVLKGIL-TAEDAKIGVEMGASAIMVSNHGG-----RQL-------------------------- 99 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~-~~~~a~~l~~aG~d~I~v~~~gg-----~~~-------------------------- 99 (202)
..+.++++++.+++|+++|... ..+.++.+.++|+|+|+.+.... ...
T Consensus 66 ~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~G 145 (305)
T 2nv1_A 66 DPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEG 145 (305)
T ss_dssp CHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCCEEecccccchHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCC
Confidence 4678899998899999998763 35667777778888886321100 000
Q ss_pred -C------------------------------------C-------ccchHHHHHHHHHHhCCCcEEE--EecCCCCHHH
Q psy16780 100 -D------------------------------------Y-------VPASIEALPEIAKAVGHKVDVY--LDGGVRYGTD 133 (202)
Q Consensus 100 -~------------------------------------~-------~~~~~~~l~~i~~~~~~~ipii--a~GGI~~~~D 133 (202)
+ . .+.+++.+.++++.. ++||+ ++|||++++|
T Consensus 146 ad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~--~iPvi~~a~GGI~~~~d 223 (305)
T 2nv1_A 146 ASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDG--KLPVVNFAAGGVATPAD 223 (305)
T ss_dssp CSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHT--SCSSCEEBCSCCCSHHH
T ss_pred CCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhc--CCCEEEEeccCCCCHHH
Confidence 0 0 012334556665554 78998 9999999999
Q ss_pred HHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhh
Q psy16780 134 VFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQ 190 (202)
Q Consensus 134 ~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~ 190 (202)
+.+++.+|||+|++||+++.. ..+ ...++.+++.++.++...+..+++++.
T Consensus 224 ~~~~~~~GadgV~vGsai~~~---~~p---~~~~~~l~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 2nv1_A 224 AALMMQLGADGVFVGSGIFKS---DNP---AKFAKAIVEATTHFTDYKLIAELSKEL 274 (305)
T ss_dssp HHHHHHTTCSCEEECGGGGGS---SCH---HHHHHHHHHHHHTTTCHHHHHHHTSCC
T ss_pred HHHHHHcCCCEEEEcHHHHcC---CCH---HHHHHHHHHHHHHhcChhhHHHHHHHh
Confidence 999999999999999999852 222 234455555555554444443444443
No 68
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.97 E-value=2.2e-09 Score=93.91 Aligned_cols=95 Identities=9% Similarity=-0.085 Sum_probs=76.5
Q ss_pred CccccHHHHHHHHHhcCC-CEEEEeccC---------------HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHH
Q psy16780 48 DETINWSDVTWLKTITKL-PIVLKGILT---------------AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPE 111 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~-Pv~vK~~~~---------------~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~ 111 (202)
.+.+..+++++||+.++- ||.+|++.. .+.++.+.++|+|+|.+++.. . ++ ..+..
T Consensus 210 R~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~----~-~~---~~~~~ 281 (361)
T 3gka_A 210 RARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF----G-GD---AIGQQ 281 (361)
T ss_dssp HSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC----S-TT---CCHHH
T ss_pred cHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC----C-CH---HHHHH
Confidence 345678999999999843 999998731 234788899999999997642 1 11 34566
Q ss_pred HHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 112 IAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 112 i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
+++.+ ++|||++||+ +++++.++++.| ||+|++||+++.
T Consensus 282 ik~~~--~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 282 LKAAF--GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp HHHHH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHc--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 77777 7899999999 999999999998 999999999996
No 69
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.97 E-value=2e-09 Score=94.10 Aligned_cols=94 Identities=16% Similarity=-0.011 Sum_probs=75.8
Q ss_pred ccccHHHHHHHHHhcC-CCEEEEeccC-----------H----HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHH
Q psy16780 49 ETINWSDVTWLKTITK-LPIVLKGILT-----------A----EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEI 112 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~-~Pv~vK~~~~-----------~----~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i 112 (202)
+.+..+++++||+.++ -||.+|++.. . +.++.+.++|+|+|.+++.. . ++ ..+..+
T Consensus 203 ~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~----~-~~---~~~~~i 274 (362)
T 4ab4_A 203 ARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE----A-DD---SIGPLI 274 (362)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC----C-TT---CCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC----C-CH---HHHHHH
Confidence 4467889999999984 3999998731 2 33788899999999998643 1 11 345667
Q ss_pred HHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 113 AKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 113 ~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
++.+ ++|||++||+ +++++.++++.| ||+|++||+++.
T Consensus 275 k~~~--~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 275 KEAF--GGPYIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp HHHH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHC--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 7777 7899999999 999999999998 999999999986
No 70
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.96 E-value=3e-08 Score=82.49 Aligned_cols=130 Identities=15% Similarity=0.119 Sum_probs=85.6
Q ss_pred hccCccccHHHHHHHHHhcCCCEEEEeccCHH---HHHHHHHcCCcEEEeeccC--------------c----------C
Q psy16780 45 SQLDETINWSDVTWLKTITKLPIVLKGILTAE---DAKIGVEMGASAIMVSNHG--------------G----------R 97 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~~~~---~a~~l~~aG~d~I~v~~~g--------------g----------~ 97 (202)
...+++...+.++++|+.+++|+++-...++. ..+.+.++|+|++++.... | +
T Consensus 75 ~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t 154 (262)
T 1rd5_A 75 SGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAI 154 (262)
T ss_dssp TTCCHHHHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTS
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCC
Confidence 33456667889999999999999875323321 1344889999998875311 0 0
Q ss_pred C-------------------CC--Ccc-----c-hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 98 Q-------------------LD--YVP-----A-SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 98 ~-------------------~~--~~~-----~-~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
. .. .+. + ..+.+.++++.. ++||++.|||++++++.+++.+|||+|.+||+
T Consensus 155 ~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSa 232 (262)
T 1rd5_A 155 PEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIGSA 232 (262)
T ss_dssp CHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEEChH
Confidence 0 00 111 1 223566666655 79999999999999999999999999999999
Q ss_pred HHHHhhh-cChHHHHHHHHHHHHHHHH
Q psy16780 151 ALWGLAH-SGKSGVRKVLDILINEFDQ 176 (202)
Q Consensus 151 ~l~~~~~-~G~~~v~~~i~~l~~~L~~ 176 (202)
+...... ..++...+.+..+.+.|+.
T Consensus 233 i~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (262)
T 1rd5_A 233 MVRQLGEAASPKQGLRRLEEYARGMKN 259 (262)
T ss_dssp HHHHHHSSSSHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHhccChhHHHHHHHHHHHHHHH
Confidence 9986532 2222222344555555543
No 71
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.92 E-value=2.5e-08 Score=83.99 Aligned_cols=132 Identities=11% Similarity=0.082 Sum_probs=88.5
Q ss_pred HhhhccCccccHHHHHHHHHh-cCCCEEEEecc------C-HHHHHHHHHcCCcEEEeeccC--------------c---
Q psy16780 42 YITSQLDETINWSDVTWLKTI-TKLPIVLKGIL------T-AEDAKIGVEMGASAIMVSNHG--------------G--- 96 (202)
Q Consensus 42 ~~~~~~d~~~~~~~i~~i~~~-~~~Pv~vK~~~------~-~~~a~~l~~aG~d~I~v~~~g--------------g--- 96 (202)
.+......+..++.++++|+. .++|+++-.-. . ...++.+.++|+|++++..-+ |
T Consensus 74 AL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~ 153 (271)
T 3nav_A 74 ALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQP 153 (271)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEE
T ss_pred HHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeE
Confidence 344555666788999999988 79999875421 1 356899999999998874210 0
Q ss_pred -------CC-------------------CCC--c-----cch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCC
Q psy16780 97 -------RQ-------------------LDY--V-----PAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGA 142 (202)
Q Consensus 97 -------~~-------------------~~~--~-----~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GA 142 (202)
+. ..+ | +.. .+.+.++++.. ++|++..+||++++++.+++..||
T Consensus 154 I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gA 231 (271)
T 3nav_A 154 IFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGA 231 (271)
T ss_dssp EEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTC
T ss_pred EEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCC
Confidence 00 000 1 111 23456666554 799999999999999999999999
Q ss_pred CEEEEcHHHHHHhhhc--ChHHHHHHHHHHHHHHH
Q psy16780 143 KMVFVGRPALWGLAHS--GKSGVRKVLDILINEFD 175 (202)
Q Consensus 143 d~V~ig~~~l~~~~~~--G~~~v~~~i~~l~~~L~ 175 (202)
|+|.+||++...+... +++...+.+..+.++|+
T Consensus 232 DgvIVGSAiv~~i~~~~~~~~~~~~~~~~~~~~l~ 266 (271)
T 3nav_A 232 AGAISGSAVVKIIETHLDNPAKQLTELANFTQAMK 266 (271)
T ss_dssp SEEEESHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CEEEECHHHHHHHHhhccchHHHHHHHHHHHHHHH
Confidence 9999999999865432 22222233444444444
No 72
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.90 E-value=4.4e-08 Score=82.29 Aligned_cols=131 Identities=13% Similarity=0.100 Sum_probs=87.2
Q ss_pred hhhccCccccHHHHHHHHHh-cCCCEEEEeccC-------HHHHHHHHHcCCcEEEeeccC--------------c----
Q psy16780 43 ITSQLDETINWSDVTWLKTI-TKLPIVLKGILT-------AEDAKIGVEMGASAIMVSNHG--------------G---- 96 (202)
Q Consensus 43 ~~~~~d~~~~~~~i~~i~~~-~~~Pv~vK~~~~-------~~~a~~l~~aG~d~I~v~~~g--------------g---- 96 (202)
+....+.+..++.++++|+. .++|+++-.-.+ ...++.+.++|+|++++..-. |
T Consensus 73 L~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 73 LAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEE
T ss_pred HHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEE
Confidence 44455666778999999988 799988753322 356899999999998884210 0
Q ss_pred ------CC-------------------CC---Cc----cc-hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCC
Q psy16780 97 ------RQ-------------------LD---YV----PA-SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAK 143 (202)
Q Consensus 97 ------~~-------------------~~---~~----~~-~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd 143 (202)
+. .. +. ++ ..+.+.++++.. ++||+..|||++++++.+++..|||
T Consensus 153 ~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gAD 230 (267)
T 3vnd_A 153 FIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAA 230 (267)
T ss_dssp CEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCS
T ss_pred EEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCC
Confidence 00 00 11 11 123455555544 7999999999999999999999999
Q ss_pred EEEEcHHHHHHhhhc--ChHHHHHHHHHHHHHHH
Q psy16780 144 MVFVGRPALWGLAHS--GKSGVRKVLDILINEFD 175 (202)
Q Consensus 144 ~V~ig~~~l~~~~~~--G~~~v~~~i~~l~~~L~ 175 (202)
+|.+||++++.+... ..+...+.+..+.++|+
T Consensus 231 gvVVGSaiv~~i~~~~~~~~~~~~~~~~~~~~l~ 264 (267)
T 3vnd_A 231 GAISGSAVVKIIEAHQHDEATLLAKLAEFTTAMK 264 (267)
T ss_dssp EEEECHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 999999999865432 22223333444444444
No 73
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.89 E-value=5e-08 Score=81.66 Aligned_cols=120 Identities=18% Similarity=0.047 Sum_probs=81.8
Q ss_pred HHHHHHHHHhc--CCCEEEEeccCHHHHHHHHHcCCcEEEeecc-CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC
Q psy16780 53 WSDVTWLKTIT--KLPIVLKGILTAEDAKIGVEMGASAIMVSNH-GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR 129 (202)
Q Consensus 53 ~~~i~~i~~~~--~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~ 129 (202)
.+.++..++.+ ++.++.-...+.+.++.+.+.|+|+|...+. .|+. .+..+.+.++.+++.. ++||++.|||+
T Consensus 113 ~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~--~~~~~~~~l~~i~~~~--~iPviv~gGI~ 188 (264)
T 1xm3_A 113 VETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSG--QGILNPLNLSFIIEQA--KVPVIVDAGIG 188 (264)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCC
T ss_pred HHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCC--CCCCCHHHHHHHHhcC--CCCEEEEeCCC
Confidence 35667676653 5556543456788999999999999943121 1222 1223456777777754 89999999999
Q ss_pred CHHHHHHHHHhCCCEEEEcHHHHHHhhhcCh-HHHHHHHHHHHHHHHHHHH
Q psy16780 130 YGTDVFKALALGAKMVFVGRPALWGLAHSGK-SGVRKVLDILINEFDQALA 179 (202)
Q Consensus 130 ~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~-~~v~~~i~~l~~~L~~~m~ 179 (202)
+++|+.+++++|||+|.+||+++.. ..+ +.+.++.+.++.....++.
T Consensus 189 t~eda~~~~~~GAdgViVGSAi~~a---~dp~~~~~~l~~~v~~~~~~~~~ 236 (264)
T 1xm3_A 189 SPKDAAYAMELGADGVLLNTAVSGA---DDPVKMARAMKLAVEAGRLSYEA 236 (264)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHTS---SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEcHHHhCC---CCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998752 222 3445555555554444443
No 74
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.88 E-value=2.1e-09 Score=91.68 Aligned_cols=96 Identities=24% Similarity=0.283 Sum_probs=75.5
Q ss_pred HHHHHHHh-cCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCC-----------------------CC-------cc
Q psy16780 55 DVTWLKTI-TKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQL-----------------------DY-------VP 103 (202)
Q Consensus 55 ~i~~i~~~-~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~-----------------------~~-------~~ 103 (202)
.++.+++. .+.++++ .+.+.+++.++.++|+|.|.+.|.+|+.. +. ..
T Consensus 115 li~~i~~~~~g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~ 193 (297)
T 4adt_A 115 EYNHINKHKFKTPFVC-GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLR 193 (297)
T ss_dssp SSCCCCGGGCSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHT
T ss_pred HHHHHHhcCCCCeEEE-EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCC
Confidence 45555553 4788887 57888999999999999999987655431 11 13
Q ss_pred chHHHHHHHHHHhCCCcEEE--EecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 104 ASIEALPEIAKAVGHKVDVY--LDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 104 ~~~~~l~~i~~~~~~~ipii--a~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
++++.++++++.+ ++|++ +.|||++++|+.+++.+|||+|++|+.|+.
T Consensus 194 ~~~~ll~~i~~~~--~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~ 243 (297)
T 4adt_A 194 APIDLILLTRKLK--RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFE 243 (297)
T ss_dssp CCHHHHHHHHHHT--SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred CCHHHHHHHHHhc--CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHc
Confidence 4566778887776 57776 999999999999999999999999999985
No 75
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.88 E-value=1e-09 Score=93.03 Aligned_cols=123 Identities=22% Similarity=0.222 Sum_probs=87.8
Q ss_pred CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCC---------------------CCC---------ccchHHHHHHHH
Q psy16780 64 KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQ---------------------LDY---------VPASIEALPEIA 113 (202)
Q Consensus 64 ~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~---------------------~~~---------~~~~~~~l~~i~ 113 (202)
++++++. +.+++.+..+.++|+|+|.+.+-.+.. ... .+++++.+.+++
T Consensus 125 ~i~l~~~-v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~ 203 (297)
T 2zbt_A 125 KVPFVCG-ARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVH 203 (297)
T ss_dssp SSCEEEE-ESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHH
T ss_pred CceEEee-cCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHH
Confidence 6777764 467888888999999999886310100 000 123455677776
Q ss_pred HHhCCCcEEE--EecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhh
Q psy16780 114 KAVGHKVDVY--LDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQR 191 (202)
Q Consensus 114 ~~~~~~ipii--a~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~ 191 (202)
+.. ++|++ ++|||++++|+.+++.+|||+|++||+++.. .. ....++.+++.++.++...++.+++++++
T Consensus 204 ~~~--~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~---~d---p~~~~~~l~~~i~~~~~~~~~~~~~~~~g 275 (297)
T 2zbt_A 204 DHG--RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS---GD---PRKRARAIVRAVAHYNDPEVLAEVSEDLG 275 (297)
T ss_dssp HHS--SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS---SC---HHHHHHHHHHHHHTTTCHHHHHHHHTTCC
T ss_pred Hhc--CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC---CC---HHHHHHHHHHHHHHHhchHhhhHHHHhcC
Confidence 655 78888 9999999999999999999999999998742 22 23566777777777777667777788776
Q ss_pred cccc
Q psy16780 192 EMVV 195 (202)
Q Consensus 192 ~~~~ 195 (202)
..+.
T Consensus 276 ~~~~ 279 (297)
T 2zbt_A 276 EPMV 279 (297)
T ss_dssp CCC-
T ss_pred ceeE
Confidence 6543
No 76
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.87 E-value=8.7e-09 Score=90.61 Aligned_cols=97 Identities=5% Similarity=-0.184 Sum_probs=75.1
Q ss_pred cccHHHHHHHHHhcC-CCEEEEeccC---------------HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHH
Q psy16780 50 TINWSDVTWLKTITK-LPIVLKGILT---------------AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIA 113 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~-~Pv~vK~~~~---------------~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~ 113 (202)
.+..++++++|+.++ .||.+|++.. .+.++.+.++|+|+|.+++..-.. ...+ .+ +..++
T Consensus 228 r~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~~~-~~-~~~ir 303 (379)
T 3aty_A 228 QLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQIG-DV-VAWVR 303 (379)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CCCC-CH-HHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CCcc-HH-HHHHH
Confidence 356788999999884 4899998631 244678889999999998742111 0112 24 66777
Q ss_pred HHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 114 KAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 114 ~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
+.+ ++|||++||| +++++.++++.| ||+|++||+++.
T Consensus 304 ~~~--~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 304 GSY--SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp TTC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHC--CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 666 7999999999 999999999998 999999999996
No 77
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.84 E-value=1.1e-07 Score=79.60 Aligned_cols=105 Identities=10% Similarity=0.053 Sum_probs=77.3
Q ss_pred CccccHHHHHHHHHh-cCCCEEEEec-cC-------HHHHHHHHHcCCcEEEeeccCc----------------------
Q psy16780 48 DETINWSDVTWLKTI-TKLPIVLKGI-LT-------AEDAKIGVEMGASAIMVSNHGG---------------------- 96 (202)
Q Consensus 48 d~~~~~~~i~~i~~~-~~~Pv~vK~~-~~-------~~~a~~l~~aG~d~I~v~~~gg---------------------- 96 (202)
..+...+.++++|+. +++||++ .. .+ ...++.+.++|+|++++..-..
T Consensus 77 ~~~~~~~~v~~ir~~~~~~Pv~l-m~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~ 155 (268)
T 1qop_A 77 TPAQCFEMLAIIREKHPTIPIGL-LMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICP 155 (268)
T ss_dssp CHHHHHHHHHHHHHHCSSSCEEE-EECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEEC
T ss_pred CHHHHHHHHHHHHhcCCCCCEEE-EEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEC
Confidence 345567899999999 7999876 22 11 4778899999999988753110
Q ss_pred --CC-------------------CC--Cc------cchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 97 --RQ-------------------LD--YV------PASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 97 --~~-------------------~~--~~------~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~i 147 (202)
+. .. +| +...+.+.++++.. ++||++.|||++++++.+++..|||+|.+
T Consensus 156 p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVV 233 (268)
T 1qop_A 156 PNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAIS 233 (268)
T ss_dssp TTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 00 00 01 11245667776655 79999999999999999999999999999
Q ss_pred cHHHHHHh
Q psy16780 148 GRPALWGL 155 (202)
Q Consensus 148 g~~~l~~~ 155 (202)
||++....
T Consensus 234 GSai~~~~ 241 (268)
T 1qop_A 234 GSAIVKII 241 (268)
T ss_dssp CHHHHHHH
T ss_pred ChHHhhhH
Confidence 99999864
No 78
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.84 E-value=2.1e-08 Score=82.88 Aligned_cols=100 Identities=24% Similarity=0.138 Sum_probs=76.1
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEec-----cCHHHHH----HHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGI-----LTAEDAK----IGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~-----~~~~~a~----~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
.+|.+...+.|+.+++.++- ..+|.+ ++.+... .+.++|+|+|..|.+- ..+..+.+.+..+++.+
T Consensus 123 ~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf----~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 123 AKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGF----GTHGATPEDVKLMKDTV 197 (239)
T ss_dssp TTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSS----SSCCCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCC----CCCCCCHHHHHHHHHhh
Confidence 57888888899999998852 256654 4555544 4489999999987431 12235666666666667
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
+++++|.++||||+.+|+.+++++||+.++..+.
T Consensus 198 g~~v~VKasGGIrt~~da~~~i~aGA~riGtS~~ 231 (239)
T 3ngj_A 198 GDKALVKAAGGIRTFDDAMKMINNGASRIGASAG 231 (239)
T ss_dssp GGGSEEEEESSCCSHHHHHHHHHTTEEEEEESCH
T ss_pred CCCceEEEeCCCCCHHHHHHHHHhcccceecccH
Confidence 7789999999999999999999999998877654
No 79
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.83 E-value=6.3e-08 Score=78.37 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=61.2
Q ss_pred ccCHHHHHHHHHcCCcEEEeeccCcCCC-CC-ccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 72 ILTAEDAKIGVEMGASAIMVSNHGGRQL-DY-VPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 72 ~~~~~~a~~l~~aG~d~I~v~~~gg~~~-~~-~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
+.++++++.+.+.|+|+|.+++..+++. .+ .+..++.+.++++.+ ++||++.||| +++++.+++.+||++|.+||
T Consensus 117 v~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 117 VHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TPDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp ECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CGGGHHHHHHTTCSEEEESH
T ss_pred cCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CHHHHHHHHHcCCCEEEEhH
Confidence 3688999999999999999865322221 11 133566777777666 7999999999 99999999999999999999
Q ss_pred HHHH
Q psy16780 150 PALW 153 (202)
Q Consensus 150 ~~l~ 153 (202)
.++.
T Consensus 194 ~i~~ 197 (221)
T 1yad_A 194 GIFS 197 (221)
T ss_dssp HHHT
T ss_pred HhhC
Confidence 9974
No 80
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.81 E-value=9.2e-09 Score=96.04 Aligned_cols=104 Identities=17% Similarity=0.038 Sum_probs=79.5
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEecc--------CH----HHHHHHHHcCCcEEEeeccCcCC------CCCcc-chH
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGIL--------TA----EDAKIGVEMGASAIMVSNHGGRQ------LDYVP-ASI 106 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~~--------~~----~~a~~l~~aG~d~I~v~~~gg~~------~~~~~-~~~ 106 (202)
++.+..++++++|+.+ ++||++|++. +. +.++.+.++|+|+|.++++.... ....+ ..+
T Consensus 190 r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~ 269 (671)
T 1ps9_A 190 RMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFS 269 (671)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTH
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHH
Confidence 3556788999999998 7999999872 23 45788899999999997632111 00111 123
Q ss_pred HHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 107 EALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 107 ~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
+.+..+++.+ ++|||++|||++++++.++++.| ||+|++||+++.
T Consensus 270 ~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 270 WVTRKLKGHV--SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLA 315 (671)
T ss_dssp HHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred HHHHHHHHhc--CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHh
Confidence 4566666655 79999999999999999999998 999999999986
No 81
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.81 E-value=2.7e-08 Score=82.95 Aligned_cols=101 Identities=15% Similarity=0.192 Sum_probs=77.9
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeecc--CcC-----------CC------------------
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNH--GGR-----------QL------------------ 99 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~--gg~-----------~~------------------ 99 (202)
..+.++.+++.+++||..|.- .+..++..+.++|||+|.+... ... .+
T Consensus 94 ~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~ 173 (254)
T 1vc4_A 94 SLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVEVHTERELEIALEA 173 (254)
T ss_dssp CHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchHHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence 678999999999999999974 6777888899999999998542 100 00
Q ss_pred ------------CCccchHHHHHHHHHHhCC---CcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 100 ------------DYVPASIEALPEIAKAVGH---KVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 100 ------------~~~~~~~~~l~~i~~~~~~---~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
..-.++++.+.++++.++. ++|+|+.|||+|++|+.++.. ||++|.+|++++.
T Consensus 174 gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~ 241 (254)
T 1vc4_A 174 GAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMR 241 (254)
T ss_dssp TCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHT
T ss_pred CCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcC
Confidence 0112344455555555533 689999999999999999999 9999999999986
No 82
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.80 E-value=7e-08 Score=82.89 Aligned_cols=45 Identities=33% Similarity=0.457 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCCcEE--EEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 107 EALPEIAKAVGHKVDV--YLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 107 ~~l~~i~~~~~~~ipi--ia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
+.+.++++.. ++|| ++.|||.|++|+.+++.+|||+|++||+++.
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK 276 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhc
Confidence 4455565544 7888 6999999999999999999999999999985
No 83
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.80 E-value=9.8e-08 Score=79.40 Aligned_cols=106 Identities=11% Similarity=0.231 Sum_probs=82.7
Q ss_pred Cccc---cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeeccC----------------c-----------
Q psy16780 48 DETI---NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNHG----------------G----------- 96 (202)
Q Consensus 48 d~~~---~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~g----------------g----------- 96 (202)
|+++ +.+.+..+|+.+++||..|.- .++.++..+..+|||+|-+...- |
T Consensus 85 d~~~F~Gs~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~ 164 (258)
T 4a29_A 85 EEKYFNGSYETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILINDEN 164 (258)
T ss_dssp CSTTTCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHH
T ss_pred CCCCCCCCHHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHH
Confidence 5554 688999999999999999964 78888888888999998765320 0
Q ss_pred -----------------CCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 97 -----------------RQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 97 -----------------~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
|++..-..+.....++...++.++.+|+.+||++++|+.++...|+|+|.||.+|++
T Consensus 165 El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr 238 (258)
T 4a29_A 165 DLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMR 238 (258)
T ss_dssp HHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhC
Confidence 001111234445556666677789999999999999999999999999999999997
No 84
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.79 E-value=2.3e-08 Score=81.80 Aligned_cols=76 Identities=18% Similarity=0.143 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHh---CCCEEEEcHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALAL---GAKMVFVGRPA 151 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~---GAd~V~ig~~~ 151 (202)
.+.++.+.++|++.|.+++....+... .++++.+.++++.+ ++|||++|||++.+|+.+++++ ||++|++||++
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~~~-g~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGTLG-GPNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTTTS-CCCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred HHHHHHHHhCCCCEEEEEecCCccccC-CCCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHH
Confidence 677899999999999987642111111 24777888887655 8999999999999999999998 99999999999
Q ss_pred HH
Q psy16780 152 LW 153 (202)
Q Consensus 152 l~ 153 (202)
+.
T Consensus 229 ~~ 230 (244)
T 2y88_A 229 YA 230 (244)
T ss_dssp HT
T ss_pred HC
Confidence 85
No 85
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.78 E-value=5e-08 Score=80.19 Aligned_cols=76 Identities=24% Similarity=0.268 Sum_probs=62.2
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.+.|++.+.+++.+..+... .++++.+.++++.+ ++|||++|||++++|+.+++.+|||+|++||+++.
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~-g~~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~ 230 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKE-GYDLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHF 230 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCS-CCCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcC-CCCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHc
Confidence 577899999999999886432111112 24688888888877 89999999999999999999999999999999985
No 86
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.78 E-value=9.1e-08 Score=80.94 Aligned_cols=102 Identities=20% Similarity=0.215 Sum_probs=72.8
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEec-----cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGI-----LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~-----~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
.+|-+...+.|+.+++.++-| .+|.+ ++.+. ++.+.++|+|+|..+.+-++. ...+.+...++++.+..
T Consensus 154 ~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~-GAT~edv~lmr~~v~~~ 231 (288)
T 3oa3_A 154 EKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGP-GASIENVSLMSAVCDSL 231 (288)
T ss_dssp TTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSC-CCCHHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCCC-CCCHHHHHHHHHHHHHh
Confidence 466677888999999988777 47876 45555 567789999999987421110 01122344444444333
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
..+++|.++||||+.+|+.+++.+||+.++..+
T Consensus 232 g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 232 QSETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp SSCCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 568999999999999999999999999766655
No 87
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.77 E-value=7.2e-08 Score=78.52 Aligned_cols=76 Identities=22% Similarity=0.295 Sum_probs=61.1
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.+.|+|.|.+.+....... ..++++.+.++++.+ ++||+++|||++.+|+.+++.+||++|++||+++.
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~-~~~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTG-LGYDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTC-SCCCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCc-CcCCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 47789999999999998653211111 123677788887766 79999999999999999999999999999999975
No 88
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.76 E-value=1.2e-08 Score=105.08 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=70.9
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHH----HHcCCcEEE---eecc--CcC-C-CCCccchHHHHHHHHHHhCCCcEEE
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIG----VEMGASAIM---VSNH--GGR-Q-LDYVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l----~~aG~d~I~---v~~~--gg~-~-~~~~~~~~~~l~~i~~~~~~~ipii 123 (202)
.++.++ ..+++++ +.+.+..+++.+ .++|+|+|+ +.|. ||. . .+...+....++++++.+ ++|||
T Consensus 684 ~~~~l~-~~gi~~i-~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~--~ipvi 759 (2060)
T 2uva_G 684 ANEYIQ-TLGIRHI-SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS--NIVLV 759 (2060)
T ss_dssp HHHHHH-HSCCSEE-EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTST--TEEEE
T ss_pred HHHHHH-HcCCeEE-EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHc--CCCEE
Confidence 444444 4589988 455555555544 899999999 5542 222 1 122244566778887766 79999
Q ss_pred EecCCCCHHHHHHHH-----------HhCCCEEEEcHHHHHH
Q psy16780 124 LDGGVRYGTDVFKAL-----------ALGAKMVFVGRPALWG 154 (202)
Q Consensus 124 a~GGI~~~~D~~kal-----------~~GAd~V~ig~~~l~~ 154 (202)
+.|||.+++|+.+++ ++|||+|+|||.|+..
T Consensus 760 aaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t 801 (2060)
T 2uva_G 760 AGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTA 801 (2060)
T ss_dssp EESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGB
T ss_pred EeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcC
Confidence 999999999999999 9999999999999864
No 89
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.75 E-value=4.8e-08 Score=80.10 Aligned_cols=76 Identities=24% Similarity=0.175 Sum_probs=61.9
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHh-----C-CCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALAL-----G-AKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~-----G-Ad~V~ig 148 (202)
.+.++.+.++|++.|.+++....+... .++++.+.++++.+ ++|||++|||++++|+.+++.. | ||+|++|
T Consensus 147 ~e~~~~~~~~G~~~i~~t~~~~~g~~~-g~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vg 223 (241)
T 1qo2_A 147 VSLLKRLKEYGLEEIVHTEIEKDGTLQ-EHDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVG 223 (241)
T ss_dssp HHHHHHHHTTTCCEEEEEETTHHHHTC-CCCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEEC
T ss_pred HHHHHHHHhCCCCEEEEEeecccccCC-cCCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEee
Confidence 355788999999999997642111111 24688888888887 8999999999999999999998 9 9999999
Q ss_pred HHHHH
Q psy16780 149 RPALW 153 (202)
Q Consensus 149 ~~~l~ 153 (202)
|+|+.
T Consensus 224 sal~~ 228 (241)
T 1qo2_A 224 RAFLE 228 (241)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 99985
No 90
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.75 E-value=8.1e-08 Score=80.15 Aligned_cols=87 Identities=16% Similarity=0.104 Sum_probs=65.7
Q ss_pred CCCEEEEeccCHHHHHHHHHcCCcEEEeecc-CcCCCCCccchHHHHHHHHHHhCCC-cEEEEecCCCCHHHHHHHHHhC
Q psy16780 64 KLPIVLKGILTAEDAKIGVEMGASAIMVSNH-GGRQLDYVPASIEALPEIAKAVGHK-VDVYLDGGVRYGTDVFKALALG 141 (202)
Q Consensus 64 ~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~-ipiia~GGI~~~~D~~kal~~G 141 (202)
++.|+-....++..++++.++|+++|.--+. -|++ .+..+.+.+..+++.. .+ +|||+.|||.+++|+.+++++|
T Consensus 124 Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG--~Gi~~~~~L~~i~~~~-~~~vPVI~~GGI~tpsDAa~AmeLG 200 (268)
T 2htm_A 124 DFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSG--WGVRTRALLELFAREK-ASLPPVVVDAGLGLPSHAAEVMELG 200 (268)
T ss_dssp TCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTC--CCSTTHHHHHHHHHTT-TTSSCBEEESCCCSHHHHHHHHHTT
T ss_pred CCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCC--cccCCHHHHHHHHHhc-CCCCeEEEeCCCCCHHHHHHHHHcC
Confidence 4344322357899999999999999965332 2321 1344566778877622 26 9999999999999999999999
Q ss_pred CCEEEEcHHHHH
Q psy16780 142 AKMVFVGRPALW 153 (202)
Q Consensus 142 Ad~V~ig~~~l~ 153 (202)
||+|.+|+++..
T Consensus 201 AdgVlVgSAI~~ 212 (268)
T 2htm_A 201 LDAVLVNTAIAE 212 (268)
T ss_dssp CCEEEESHHHHT
T ss_pred CCEEEEChHHhC
Confidence 999999999875
No 91
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.74 E-value=5.4e-08 Score=80.05 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=60.8
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.+.|++.|.+++... ......++++.+.++++.+ ++|||++|||++.+|+.+++.+|||+|++||+++.
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~-~g~~~g~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDR-DGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTT-TTSCSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHCCCCEEEEEeccC-CCCCCCCCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 4678999999999998864321 1111124677888887665 79999999999999999999999999999999985
No 92
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.73 E-value=5.9e-08 Score=77.50 Aligned_cols=99 Identities=21% Similarity=0.170 Sum_probs=68.4
Q ss_pred cHHHHHHHHHhc--CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCc-------------------CCC----------C
Q psy16780 52 NWSDVTWLKTIT--KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGG-------------------RQL----------D 100 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg-------------------~~~----------~ 100 (202)
..+.++.+|+.+ ++++.+..+.++++++.+.++|+|+| ++.... +.- +
T Consensus 48 ~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad 126 (205)
T 1wa3_A 48 ADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHT 126 (205)
T ss_dssp HHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCC
Confidence 345788888876 34544444578999999999999999 643211 000 0
Q ss_pred --C-cc---chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 101 --Y-VP---ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 101 --~-~~---~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
. .+ ...+.++++++.++ ++||+++|||. .+++.+++.+||++|.+||.++.
T Consensus 127 ~vk~~~~~~~g~~~~~~l~~~~~-~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 127 ILKLFPGEVVGPQFVKAMKGPFP-NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp EEEETTHHHHHHHHHHHHHTTCT-TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred EEEEcCccccCHHHHHHHHHhCC-CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 0 01 11233444444332 79999999996 78999999999999999999874
No 93
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.73 E-value=2.8e-08 Score=81.51 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=60.3
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHh---CCCEEEEcHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALAL---GAKMVFVGRPA 151 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~---GAd~V~ig~~~ 151 (202)
.+.++.+.+.|++.|.+.+... ......++++.+.++++.+ ++|||++|||++++|+.+++++ |||+|++||++
T Consensus 149 ~e~~~~~~~~G~~~i~~~~~~~-~~~~~g~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al 225 (244)
T 1vzw_A 149 YETLDRLNKEGCARYVVTDIAK-DGTLQGPNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKAL 225 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEEC--------CCCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred HHHHHHHHhCCCCEEEEeccCc-ccccCCCCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHH
Confidence 4667999999999998875311 1111124678888888766 7999999999999999999998 99999999999
Q ss_pred HH
Q psy16780 152 LW 153 (202)
Q Consensus 152 l~ 153 (202)
+.
T Consensus 226 ~~ 227 (244)
T 1vzw_A 226 YA 227 (244)
T ss_dssp HT
T ss_pred Hc
Confidence 84
No 94
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.72 E-value=3.3e-08 Score=93.25 Aligned_cols=103 Identities=11% Similarity=0.029 Sum_probs=77.2
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEecc---------C-H----HHHHHHHHcCCcEEEeeccCcCCC--------CCcc
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGIL---------T-A----EDAKIGVEMGASAIMVSNHGGRQL--------DYVP 103 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~~---------~-~----~~a~~l~~aG~d~I~v~~~gg~~~--------~~~~ 103 (202)
.+.|..++++++|+.+ +.||++|++. + . +.++.+.+ |+|.+.+++.+...+ ....
T Consensus 198 R~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~ 276 (729)
T 1o94_A 198 RARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQ 276 (729)
T ss_dssp HTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCT
T ss_pred HhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCc
Confidence 4566889999999998 8999999862 1 2 33455554 899999976431000 0111
Q ss_pred -chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 104 -ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 104 -~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
..+.....+++.+ ++|||++|||++++++.++++.| ||+|++||+++.
T Consensus 277 ~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 277 GHTIPWVKLVKQVS--KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp TTTHHHHHHHHTTC--SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHH
T ss_pred cccHHHHHHHHHHC--CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhc
Confidence 1355667777766 89999999999999999999998 999999999985
No 95
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.70 E-value=3.1e-08 Score=92.81 Aligned_cols=102 Identities=9% Similarity=-0.073 Sum_probs=75.1
Q ss_pred ccccHHHHHHHHHhc--CCCEEEEecc--------CH----HHHHHHHHcCCcEEEeeccCc-----CCC-CCccchHHH
Q psy16780 49 ETINWSDVTWLKTIT--KLPIVLKGIL--------TA----EDAKIGVEMGASAIMVSNHGG-----RQL-DYVPASIEA 108 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~--~~Pv~vK~~~--------~~----~~a~~l~~aG~d~I~v~~~gg-----~~~-~~~~~~~~~ 108 (202)
..|..++++++|+.+ ++||.+|++. +. +.++.+.+ |+|.+.++..+- ... ......+..
T Consensus 207 ~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~ 285 (690)
T 3k30_A 207 MRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEF 285 (690)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHH
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHH
Confidence 347789999999998 6799999862 23 33566655 899999976321 000 111112344
Q ss_pred HHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 109 LPEIAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 109 l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
...+++.+ ++|||++|||++++++.++++.| ||+|++||+++.
T Consensus 286 ~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 286 VAGLKKLT--TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp HTTSGGGC--SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHc--CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHh
Confidence 55566666 79999999999999999999998 999999999985
No 96
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.70 E-value=5.6e-08 Score=81.60 Aligned_cols=89 Identities=26% Similarity=0.354 Sum_probs=70.9
Q ss_pred hcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCC---------------------C-C---------CccchHHHHH
Q psy16780 62 ITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQ---------------------L-D---------YVPASIEALP 110 (202)
Q Consensus 62 ~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~---------------------~-~---------~~~~~~~~l~ 110 (202)
.+++|+.+ .+.+.+++.+.++.|+|.|-..+..||. + + ...++++.+.
T Consensus 113 ~f~vpfv~-~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~ 191 (291)
T 3o07_A 113 KFKVPFVC-GAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLK 191 (291)
T ss_dssp GCSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHH
T ss_pred cCCCcEEe-eCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHH
Confidence 45788876 5788999999999999999886543332 1 1 0135677888
Q ss_pred HHHHHhCCCcEE--EEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 111 EIAKAVGHKVDV--YLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 111 ~i~~~~~~~ipi--ia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
++++.. ++|| |++|||.|++|+.+++.+|||+|++||.++.
T Consensus 192 ~Ike~~--~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 192 DVLEKG--KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFK 234 (291)
T ss_dssp HHHHHT--SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred HHHHcc--CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhC
Confidence 887775 7888 5699999999999999999999999998875
No 97
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.69 E-value=2e-07 Score=77.88 Aligned_cols=99 Identities=23% Similarity=0.229 Sum_probs=75.2
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEec-----cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGI-----LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~-----~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
.++-+...+.|+.+++.++ ...+|.+ ++.+. ++.+.++|+|+|..|.+ +..+..+.+.+..+++.+
T Consensus 139 ~g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTG----f~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 139 AKEWEYVYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTG----FGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp TTCHHHHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCS----SSSCCCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCC----CCCCCCCHHHHHHHHHHh
Confidence 4677777888999998875 3446865 35444 35678999999998743 122345666677777777
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
+++++|-++||||+.+|+.+++.+||+-++..+
T Consensus 214 g~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 214 GDEMGVKASGGIRTFEDAVKMIMYGADRIGTSS 246 (260)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCceEEEeCCCCCHHHHHHHHHcCCceeecch
Confidence 789999999999999999999999999776654
No 98
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.69 E-value=6.6e-08 Score=86.74 Aligned_cols=130 Identities=15% Similarity=0.179 Sum_probs=94.4
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeeccCcC--------------C------------------
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNHGGR--------------Q------------------ 98 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~gg~--------------~------------------ 98 (202)
..+.|+.+|+.+++||+.|.- .++.++..+..+|||+|-+...--. +
T Consensus 96 s~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~ 175 (452)
T 1pii_A 96 SFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIA 175 (452)
T ss_dssp CTTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 577999999999999999964 5566677788999999887643110 0
Q ss_pred ------------CCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHH
Q psy16780 99 ------------LDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKV 166 (202)
Q Consensus 99 ------------~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~ 166 (202)
+..-.++++...++.+.++.++++|+.|||+|++|+.++..+ |++|.+|+++++. +.....
T Consensus 176 lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~------~d~~~~ 248 (452)
T 1pii_A 176 LGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAH------DDLHAA 248 (452)
T ss_dssp TTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTC------SCHHHH
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCC------cCHHHH
Confidence 011123455666777777778999999999999999999999 9999999999963 222333
Q ss_pred HHHHHHHHHHHHHHhCCCCHHhhhh
Q psy16780 167 LDILINEFDQALALSGCTSVGEIQR 191 (202)
Q Consensus 167 i~~l~~~L~~~m~~~G~~~i~el~~ 191 (202)
++.+.. ....-||.++.++.+.
T Consensus 249 ~~~l~~---~~~KICGit~~eda~~ 270 (452)
T 1pii_A 249 VRRVLL---GENKVCGLTRGQDAKA 270 (452)
T ss_dssp HHHHHH---CSCEECCCCSHHHHHH
T ss_pred HHHHHH---HhccccCCCcHHHHHH
Confidence 444432 2345788888887753
No 99
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.68 E-value=8e-08 Score=88.30 Aligned_cols=76 Identities=16% Similarity=0.098 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHH-hCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALA-LGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~-~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|++.|.+++....+...+ ++++.+.++++.+ ++|||++|||++.+|+.+++. .||++|++||+|+.
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~ 531 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHR 531 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHc
Confidence 5889999999999999865321111223 5888999998887 899999999999999999998 79999999999974
No 100
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.68 E-value=4.1e-08 Score=81.43 Aligned_cols=76 Identities=12% Similarity=0.099 Sum_probs=60.2
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.+.|++.|.+++........ .++++.+.++++.+ ++|||++|||++++|+.+++.+|||+|++||+++.
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~-g~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCS-CCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcC-CCCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHc
Confidence 466799999999999986532111111 24677788887766 89999999999999999999999999999999875
No 101
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.64 E-value=2.4e-07 Score=77.88 Aligned_cols=122 Identities=16% Similarity=0.117 Sum_probs=81.5
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEec--------cCHHHHHHHHHcCCcEEEeeccCcC------------CC------
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGI--------LTAEDAKIGVEMGASAIMVSNHGGR------------QL------ 99 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~--------~~~~~a~~l~~aG~d~I~v~~~gg~------------~~------ 99 (202)
....+...+.++++|+..++|+++ +. .....++.+.++|+|++++-.-.-. .+
T Consensus 73 G~~~~~~~~~v~~ir~~~~~Pii~-m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~li 151 (271)
T 1ujp_A 73 GMSVQGALELVREVRALTEKPLFL-MTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLL 151 (271)
T ss_dssp TCCHHHHHHHHHHHHHHCCSCEEE-ECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEE-EecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEe
Confidence 344455678999999998999987 22 1246678899999998876421000 00
Q ss_pred -------------------------C--Cc------cchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEE
Q psy16780 100 -------------------------D--YV------PASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVF 146 (202)
Q Consensus 100 -------------------------~--~~------~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ 146 (202)
. .| .+..+.+.++++.. ++||++.|||++++++.++ .|||+|.
T Consensus 152 ap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVI 227 (271)
T 1ujp_A 152 APTSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVV 227 (271)
T ss_dssp CTTCCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEE
T ss_pred CCCCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEE
Confidence 0 01 01134556665544 7999999999999999996 9999999
Q ss_pred EcHHHHHHhhhcChHHHHHHHHHHHHHH
Q psy16780 147 VGRPALWGLAHSGKSGVRKVLDILINEF 174 (202)
Q Consensus 147 ig~~~l~~~~~~G~~~v~~~i~~l~~~L 174 (202)
+||++...... + +.+.++++.++..+
T Consensus 228 VGSAi~~~~~~-~-~~~~~fv~~l~~~~ 253 (271)
T 1ujp_A 228 VGSALVRALEE-G-RSLAPLLQEIRQGL 253 (271)
T ss_dssp ECHHHHHHHHT-T-CCHHHHHHHHHHHH
T ss_pred EChHHhcccch-H-HHHHHHHHHHHHHH
Confidence 99999986421 1 34555555554444
No 102
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.64 E-value=5.4e-08 Score=81.36 Aligned_cols=74 Identities=9% Similarity=0.042 Sum_probs=59.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC--CcEEEEecCCCCHHHHHHHHHh--CCCEEEEcHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH--KVDVYLDGGVRYGTDVFKALAL--GAKMVFVGRPA 151 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~--~ipiia~GGI~~~~D~~kal~~--GAd~V~ig~~~ 151 (202)
+.++.+.+. ++.+.++.....+...+ ++++.+.++++.+++ ++|||++|||++.+|+.+++.+ ||++|++||++
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G-~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGG-IDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CC-CCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCC-CCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 889999999 99999965321122223 488899999887632 6999999999999999999987 99999999997
No 103
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.64 E-value=2e-07 Score=75.36 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=68.7
Q ss_pred HHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeecc--CcCCCC-CccchHHHHHHHHHHhCCCcEEEEecCCCCH
Q psy16780 56 VTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNH--GGRQLD-YVPASIEALPEIAKAVGHKVDVYLDGGVRYG 131 (202)
Q Consensus 56 i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~--gg~~~~-~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~ 131 (202)
+..+++..+. ++++.. .++++++.+.+.|+|++.++.- +++... ..+..++.+.++++.++ ++|+++.|||. +
T Consensus 107 ~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~ 183 (227)
T 2tps_A 107 AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-I 183 (227)
T ss_dssp HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-T
T ss_pred HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-H
Confidence 4555555554 455543 5777788899999999997431 111111 22346777888777662 39999999999 9
Q ss_pred HHHHHHHHhCCCEEEEcHHHHH
Q psy16780 132 TDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 132 ~D~~kal~~GAd~V~ig~~~l~ 153 (202)
+++.+++.+||++|.+||.++.
T Consensus 184 ~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 184 DNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp TTSHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEhHHhhc
Confidence 9999999999999999999874
No 104
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.64 E-value=4.1e-07 Score=75.21 Aligned_cols=103 Identities=16% Similarity=0.164 Sum_probs=79.0
Q ss_pred ccccHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeeccC--------------cCC---------------
Q psy16780 49 ETINWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNHG--------------GRQ--------------- 98 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~g--------------g~~--------------- 98 (202)
.....+.++++.+.+.+|+.+.+- .+.++++.++++|+|.|++...- |.+
T Consensus 60 ~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~ 139 (243)
T 4gj1_A 60 SKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYV 139 (243)
T ss_dssp GGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEE
T ss_pred chhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCE
Confidence 444578999999999999999965 78999999999999999986320 000
Q ss_pred -----C------------------------------CC--ccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhC
Q psy16780 99 -----L------------------------------DY--VPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALG 141 (202)
Q Consensus 99 -----~------------------------------~~--~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~G 141 (202)
+ ++ ..++.+.+..+++.+ +++|||++||+++.+|+.+. ..+
T Consensus 140 v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~-~~ipviasGGv~~~~Dl~~l-~~~ 217 (243)
T 4gj1_A 140 VAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIF-PNICIQASGGVASLKDLENL-KGI 217 (243)
T ss_dssp EC--------CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHHHHHHHHC-TTSEEEEESCCCSHHHHHHT-TTT
T ss_pred EEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHHHHHHHhc-CCCCEEEEcCCCCHHHHHHH-Hcc
Confidence 0 11 125667777776654 36999999999999999764 667
Q ss_pred CCEEEEcHHHHH
Q psy16780 142 AKMVFVGRPALW 153 (202)
Q Consensus 142 Ad~V~ig~~~l~ 153 (202)
+++|.+|++|+.
T Consensus 218 ~~gvivg~Al~~ 229 (243)
T 4gj1_A 218 CSGVIVGKALLD 229 (243)
T ss_dssp CSEEEECHHHHT
T ss_pred CchhehHHHHHC
Confidence 999999999874
No 105
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.63 E-value=5.9e-07 Score=75.01 Aligned_cols=124 Identities=12% Similarity=0.036 Sum_probs=83.1
Q ss_pred hhccCccccHHHHHHHHHhc-CCCEEEEec-cC-------HHHHHHHHHcCCcEEEeeccC--------------c----
Q psy16780 44 TSQLDETINWSDVTWLKTIT-KLPIVLKGI-LT-------AEDAKIGVEMGASAIMVSNHG--------------G---- 96 (202)
Q Consensus 44 ~~~~d~~~~~~~i~~i~~~~-~~Pv~vK~~-~~-------~~~a~~l~~aG~d~I~v~~~g--------------g---- 96 (202)
......+...+.++++|+.+ ++|+++ .. .+ ..+++.+.++|+|++++..-. |
T Consensus 73 ~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i 151 (262)
T 2ekc_A 73 KNGIRFEDVLELSETLRKEFPDIPFLL-MTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFV 151 (262)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTSCEEE-ECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEEC
T ss_pred HcCCCHHHHHHHHHHHHhhcCCCCEEE-EecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEE
Confidence 33344456778999999998 899987 32 11 366788999999998874210 0
Q ss_pred ------CC-------------------CCC--c-c-----c-hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCC
Q psy16780 97 ------RQ-------------------LDY--V-P-----A-SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGA 142 (202)
Q Consensus 97 ------~~-------------------~~~--~-~-----~-~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GA 142 (202)
+. ..+ | . . ..+.+.++++.. ++||+..+||++++++.+ +..||
T Consensus 152 ~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gA 228 (262)
T 2ekc_A 152 PLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFA 228 (262)
T ss_dssp CEECTTCCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTS
T ss_pred EEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCC
Confidence 00 000 0 0 1 113456666654 799999999999999999 88899
Q ss_pred CEEEEcHHHHHHhhhcChHHHHHHHHHHH
Q psy16780 143 KMVFVGRPALWGLAHSGKSGVRKVLDILI 171 (202)
Q Consensus 143 d~V~ig~~~l~~~~~~G~~~v~~~i~~l~ 171 (202)
|+|.+||++......+..+.+.++++.++
T Consensus 229 DgvIVGSai~~~~~~~~~~~~~~~~~~~~ 257 (262)
T 2ekc_A 229 DGVVVGSALVKLAGQKKIEDLGNLVKELK 257 (262)
T ss_dssp SEEEECHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CEEEECHHHHhhhhhhhHHHHHHHHHHHH
Confidence 99999999998643333444544444443
No 106
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.63 E-value=3.6e-07 Score=75.15 Aligned_cols=100 Identities=23% Similarity=0.245 Sum_probs=75.8
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEec-----c----CHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHH
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGI-----L----TAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEI 112 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~-----~----~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i 112 (202)
.++-+...+.|+.+++.++ ...+|.+ + +.+. ++.+.++|+|+|..+.+-+ ..+..+.+.++.+
T Consensus 108 ~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~---~~~gAt~edv~lm 183 (231)
T 3ndo_A 108 AGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFH---PSGGASVQAVEIM 183 (231)
T ss_dssp TTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCC---TTCSCCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCC---CCCCCCHHHHHHH
Confidence 4677778889999999885 3456865 4 5544 3556799999999875311 0234566777777
Q ss_pred HHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 113 AKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 113 ~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
++.++++++|-++||||+.+|+.+++.+||+-++..+
T Consensus 184 ~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 184 ARTVGERLGVKASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp HHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred HHHhCCCceEEEeCCCCCHHHHHHHHHhcchhcccch
Confidence 7777789999999999999999999999999766654
No 107
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.63 E-value=3.1e-07 Score=76.12 Aligned_cols=80 Identities=14% Similarity=0.094 Sum_probs=60.1
Q ss_pred cCHHHHHHHHHcCCcEEEeeccCcCCCC--CccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 73 LTAEDAKIGVEMGASAIMVSNHGGRQLD--YVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 73 ~~~~~a~~l~~aG~d~I~v~~~gg~~~~--~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
.++++++.+.+.|+|+|.++.-..+... ..+..++.+.++++....++|+++.||| +.+++.+++.+||++|.++++
T Consensus 143 ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sa 221 (243)
T 3o63_A 143 HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRA 221 (243)
T ss_dssp CSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESHH
T ss_pred CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHH
Confidence 5788899999999999999763222211 1233566677765542237999999999 899999999999999999999
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
++.
T Consensus 222 i~~ 224 (243)
T 3o63_A 222 ITS 224 (243)
T ss_dssp HHT
T ss_pred HhC
Confidence 985
No 108
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.62 E-value=2.9e-07 Score=75.75 Aligned_cols=76 Identities=14% Similarity=0.092 Sum_probs=61.9
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|+|.|.+....+. ......+++.+.++++.+ ++||+++|||++++|+.++++.|||+|.+|++++.
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRD-GTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTT-TCSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCcc-cCCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh
Confidence 57899999999999998653211 111234677788887776 89999999999999999999999999999998874
No 109
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.58 E-value=2.4e-07 Score=74.36 Aligned_cols=114 Identities=12% Similarity=0.123 Sum_probs=78.5
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
.+.++..+ ..+.++++. +.+++++..+.+.|+|+|.+..+ .+..++.+.++++.++.++||++.|||. .+
T Consensus 91 ~~~~~~~~-~~g~~~~~g-~~t~~e~~~a~~~G~d~v~v~~t-------~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~ 160 (212)
T 2v82_A 91 SEVIRRAV-GYGMTVCPG-CATATEAFTALEAGAQALKIFPS-------SAFGPQYIKALKAVLPSDIAVFAVGGVT-PE 160 (212)
T ss_dssp HHHHHHHH-HTTCEEECE-ECSHHHHHHHHHTTCSEEEETTH-------HHHCHHHHHHHHTTSCTTCEEEEESSCC-TT
T ss_pred HHHHHHHH-HcCCCEEee-cCCHHHHHHHHHCCCCEEEEecC-------CCCCHHHHHHHHHhccCCCeEEEeCCCC-HH
Confidence 34554444 457777765 67888999999999999987321 1223556667666553259999999997 99
Q ss_pred HHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHH
Q psy16780 133 DVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQAL 178 (202)
Q Consensus 133 D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m 178 (202)
++.+++.+||++|.+||.++..- +..+...+.++.+++.++...
T Consensus 161 ~i~~~~~~Ga~gv~vGsai~~~~--~~~~d~~~~~~~l~~~~~~~~ 204 (212)
T 2v82_A 161 NLAQWIDAGCAGAGLGSDLYRAG--QSVERTAQQAAAFVKAYREAV 204 (212)
T ss_dssp THHHHHHHTCSEEEECTTTCCTT--CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEChHHhCCC--CCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987420 111334455555555555444
No 110
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.58 E-value=8.5e-09 Score=84.99 Aligned_cols=76 Identities=14% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|++.|.+++........ .++++.+.++++.+ ++|||++|||++++|+.+++.+|||+|++||+++.
T Consensus 159 ~~~a~~~~~~G~~~i~~t~~~~~g~~~-g~~~~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCEEEEecccCCCCcC-CCCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 356788889999999986532111111 24566777777766 89999999999999999999999999999999985
No 111
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.58 E-value=6.5e-07 Score=73.15 Aligned_cols=99 Identities=21% Similarity=0.210 Sum_probs=73.1
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEec-----cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGI-----LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~-----~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
.++-+...+.|.++++.++-+ .+|.+ ++.+. ++.+.++|+|+|..+.+- ..+..+.+.+..+++.+
T Consensus 99 ~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf----~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 99 AGDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGF----GPRGASLEDVALLVRVA 173 (220)
T ss_dssp TTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSS----SSCCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCC----CCCCCCHHHHHHHHHhh
Confidence 456666788999999988555 66754 45544 466789999999987521 11234566666666666
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
..++||.++|||++.+|+.+.+.+||+-++..+
T Consensus 174 g~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~ 206 (220)
T 1ub3_A 174 QGRAQVKAAGGIRDRETALRMLKAGASRLGTSS 206 (220)
T ss_dssp TTSSEEEEESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred CCCCeEEEECCCCCHHHHHHHHHCCCcccchhH
Confidence 678999999999999999999999999555443
No 112
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.58 E-value=6.5e-07 Score=71.49 Aligned_cols=78 Identities=21% Similarity=0.206 Sum_probs=61.0
Q ss_pred cCHHHHHHHHHcCCcEEEeecc--CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 73 LTAEDAKIGVEMGASAIMVSNH--GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 73 ~~~~~a~~l~~aG~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
.+++++..+.+.|+|+|.+++. ++......+..++.+.++++.. ++|+++.|||. ++++.+++.+||++|.+||.
T Consensus 116 ~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 116 YSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVISA 192 (215)
T ss_dssp SSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESHH
T ss_pred CCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHH
Confidence 6777888888999999998651 1111112344677788887766 79999999999 99999999999999999999
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+..
T Consensus 193 i~~ 195 (215)
T 1xi3_A 193 VMG 195 (215)
T ss_dssp HHT
T ss_pred HhC
Confidence 874
No 113
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.54 E-value=3.9e-07 Score=72.93 Aligned_cols=95 Identities=21% Similarity=0.230 Sum_probs=68.3
Q ss_pred HHHHHHHHhcCCCEEEEec--cCH-HHHHHHHHcCCcEEEeecc-CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC
Q psy16780 54 SDVTWLKTITKLPIVLKGI--LTA-EDAKIGVEMGASAIMVSNH-GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR 129 (202)
Q Consensus 54 ~~i~~i~~~~~~Pv~vK~~--~~~-~~a~~l~~aG~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~ 129 (202)
+.++.+++ .+.++++-.. .++ +.++.+.+.|+|+|.+... +|... .+...+.+.++++.+ +++|++++|||+
T Consensus 94 ~~~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~--~~~~~~~i~~l~~~~-~~~~i~~~gGI~ 169 (211)
T 3f4w_A 94 SCIRAAKE-AGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAA--GRKPIDDLITMLKVR-RKARIAVAGGIS 169 (211)
T ss_dssp HHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHT--TCCSHHHHHHHHHHC-SSCEEEEESSCC
T ss_pred HHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCccccc--CCCCHHHHHHHHHHc-CCCcEEEECCCC
Confidence 35555554 3777776422 343 6689999999999887531 11111 123556777777665 379999999996
Q ss_pred CHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 130 YGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 130 ~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
++++.+++.+|||+|.+||+++.
T Consensus 170 -~~~~~~~~~~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 170 -SQTVKDYALLGPDVVIVGSAITH 192 (211)
T ss_dssp -TTTHHHHHTTCCSEEEECHHHHT
T ss_pred -HHHHHHHHHcCCCEEEECHHHcC
Confidence 99999999999999999999885
No 114
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.54 E-value=1.3e-06 Score=72.63 Aligned_cols=80 Identities=24% Similarity=0.399 Sum_probs=62.3
Q ss_pred cCCCEEEEec---------cCH---HHH-HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC
Q psy16780 63 TKLPIVLKGI---------LTA---EDA-KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR 129 (202)
Q Consensus 63 ~~~Pv~vK~~---------~~~---~~a-~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~ 129 (202)
.++|+++... .+. +.+ +.+.++|+|+|.++. +..++.+.++++.+ ++||+++|||+
T Consensus 144 ~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~--~ipvva~GGi~ 212 (273)
T 2qjg_A 144 WGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGC--PAPVVVAGGPK 212 (273)
T ss_dssp HTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHC--SSCEEEECCSC
T ss_pred cCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhC--CCCEEEEeCCC
Confidence 5899998751 333 333 788999999998863 13567788887776 79999999999
Q ss_pred C--HHH----HHHHHHhCCCEEEEcHHHHH
Q psy16780 130 Y--GTD----VFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 130 ~--~~D----~~kal~~GAd~V~ig~~~l~ 153 (202)
+ .+| +.+++.+||++|.+||.++.
T Consensus 213 ~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 213 TNTDEEFLQMIKDAMEAGAAGVAVGRNIFQ 242 (273)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEECCHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEeeHHhhC
Confidence 5 778 55556799999999999975
No 115
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.44 E-value=1.3e-06 Score=70.50 Aligned_cols=93 Identities=16% Similarity=0.162 Sum_probs=71.0
Q ss_pred ccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 51 INWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 51 ~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
...+.++..++ .++|++.. +.|++++..+.+.|+|+|.+.. .. .-+ ..+.++.++..+ +++|+++.|||.
T Consensus 92 ~d~~v~~~~~~-~g~~~i~G-~~t~~e~~~A~~~Gad~v~~fp--a~-~~g---G~~~lk~l~~~~-~~ipvvaiGGI~- 161 (207)
T 2yw3_A 92 LLEEVAALAQA-RGVPYLPG-VLTPTEVERALALGLSALKFFP--AE-PFQ---GVRVLRAYAEVF-PEVRFLPTGGIK- 161 (207)
T ss_dssp CCHHHHHHHHH-HTCCEEEE-ECSHHHHHHHHHTTCCEEEETT--TT-TTT---HHHHHHHHHHHC-TTCEEEEBSSCC-
T ss_pred CCHHHHHHHHH-hCCCEEec-CCCHHHHHHHHHCCCCEEEEec--Cc-ccc---CHHHHHHHHhhC-CCCcEEEeCCCC-
Confidence 34456666555 68898885 7889999999999999999832 11 001 235567776655 379999999997
Q ss_pred HHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 131 GTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+++.+.+++||++|.+||.++.
T Consensus 162 ~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 162 EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp GGGHHHHHTCSSBSCEEESGGGS
T ss_pred HHHHHHHHhCCCcEEEEehhhhC
Confidence 69999999999999999998763
No 116
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.42 E-value=7.4e-06 Score=67.07 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=86.0
Q ss_pred ccHHHHHHHHHh--cCCCEEEEec-cCH-HHHHHHHHcCCcEEEeeccCc------------------------CCC---
Q psy16780 51 INWSDVTWLKTI--TKLPIVLKGI-LTA-EDAKIGVEMGASAIMVSNHGG------------------------RQL--- 99 (202)
Q Consensus 51 ~~~~~i~~i~~~--~~~Pv~vK~~-~~~-~~a~~l~~aG~d~I~v~~~gg------------------------~~~--- 99 (202)
+-.+.++++|+. .++|+-+++- .++ ..++.+.++|+|.|+++.-.. +..
T Consensus 49 ~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l 128 (228)
T 3ovp_A 49 FGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYL 128 (228)
T ss_dssp BCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGT
T ss_pred cCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHH
Confidence 356799999998 4889988864 444 457788899999999964211 100
Q ss_pred -------C-----------Cc----cchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhh
Q psy16780 100 -------D-----------YV----PASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAH 157 (202)
Q Consensus 100 -------~-----------~~----~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~ 157 (202)
| ++ +..++.++++++.. .+++|.++|||+ .+.+.++..+|||.+.+||++..+
T Consensus 129 ~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a--- 203 (228)
T 3ovp_A 129 APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRS--- 203 (228)
T ss_dssp GGGGGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTC---
T ss_pred HHHhccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCC---
Confidence 0 11 22444566666543 468999999995 799999999999999999988742
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHh
Q psy16780 158 SGKSGVRKVLDILINEFDQALALS 181 (202)
Q Consensus 158 ~G~~~v~~~i~~l~~~L~~~m~~~ 181 (202)
+...+.++.+++.++......
T Consensus 204 ---~dp~~~~~~l~~~~~~~~~~~ 224 (228)
T 3ovp_A 204 ---EDPRSVINLLRNVCSEAAQKR 224 (228)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHHHHHHHHHhhc
Confidence 223355677777777666543
No 117
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=98.41 E-value=2.8e-07 Score=81.64 Aligned_cols=104 Identities=16% Similarity=0.045 Sum_probs=74.0
Q ss_pred CccccHHHHHHHHHhcC-CCEEEEecc-----------C--------HHHHHHH---HHcC--CcEEEeeccC-cCCCCC
Q psy16780 48 DETINWSDVTWLKTITK-LPIVLKGIL-----------T--------AEDAKIG---VEMG--ASAIMVSNHG-GRQLDY 101 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~-~Pv~vK~~~-----------~--------~~~a~~l---~~aG--~d~I~v~~~g-g~~~~~ 101 (202)
...|..+++++||+.++ .||.+|++. + .+.++.+ .++| +|+|.++... ....+.
T Consensus 217 r~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~ 296 (407)
T 3tjl_A 217 RARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDV 296 (407)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEEC
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcC
Confidence 34567889999999885 489999872 2 2346778 7889 9999997421 111111
Q ss_pred ccc-hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHh---C-CCEEEEcHHHHH
Q psy16780 102 VPA-SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALAL---G-AKMVFVGRPALW 153 (202)
Q Consensus 102 ~~~-~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~---G-Ad~V~ig~~~l~ 153 (202)
.+. .+..+..+++.+ ++|||++|||.+.+|+.+++.. | ||+|++||+++.
T Consensus 297 ~~~~~~~~~~~ir~~~--~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia 351 (407)
T 3tjl_A 297 SEEDQAGDNEFVSKIW--KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS 351 (407)
T ss_dssp CGGGCCCCSHHHHHHC--CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH
T ss_pred CccchhHHHHHHHHHh--CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh
Confidence 111 123345566666 6899999999999988888776 5 999999999986
No 118
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.37 E-value=3.8e-06 Score=69.86 Aligned_cols=95 Identities=12% Similarity=0.060 Sum_probs=74.1
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHc-CCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEM-GASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~a-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~ 131 (202)
.+.++..++ .+.-++| .+.+.++++.+.++ |+|.|-+.+++-+ +-..+++...++.+.++.++++|+.|||+|+
T Consensus 140 ~~l~~~a~~-lGl~~lv-Ev~~~eE~~~A~~l~g~~iIGinnr~l~---t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~ 214 (251)
T 1i4n_A 140 KEIYEAAEE-LGMDSLV-EVHSREDLEKVFSVIRPKIIGINTRDLD---TFEIKKNVLWELLPLVPDDTVVVAESGIKDP 214 (251)
T ss_dssp HHHHHHHHT-TTCEEEE-EECSHHHHHHHHTTCCCSEEEEECBCTT---TCCBCTTHHHHHGGGSCTTSEEEEESCCCCG
T ss_pred HHHHHHHHH-cCCeEEE-EeCCHHHHHHHHhcCCCCEEEEeCcccc---cCCCCHHHHHHHHHhCCCCCEEEEeCCCCCH
Confidence 344544444 4777776 67899999999999 9999988775432 2234455556666666667999999999999
Q ss_pred HHHHHHHHhCCCEEEEcHHHHH
Q psy16780 132 TDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 132 ~D~~kal~~GAd~V~ig~~~l~ 153 (202)
+|+.++..+ |++|.+|+++++
T Consensus 215 edv~~~~~~-a~avLVG~aimr 235 (251)
T 1i4n_A 215 RELKDLRGK-VNAVLVGTSIMK 235 (251)
T ss_dssp GGHHHHTTT-CSEEEECHHHHH
T ss_pred HHHHHHHHh-CCEEEEcHHHcC
Confidence 999999999 999999999997
No 119
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.34 E-value=2.8e-06 Score=69.60 Aligned_cols=76 Identities=25% Similarity=0.277 Sum_probs=59.2
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|+|.|.++..... .......++.+.++++.+ ++||++.|||++.+++.+++++|||+|.+|+.++.
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISAT-HEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSS-TTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCcc-ccCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 46788999999999998743211 011223455667776655 79999999999999999999999999999998874
No 120
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.34 E-value=3.2e-06 Score=69.30 Aligned_cols=76 Identities=16% Similarity=0.208 Sum_probs=59.2
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|+|.+.+....+.. .+....++.+.++++.+ ++|+++.|||++++++.+++++|||.|.+|+..+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASV-EKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 467889999999999987643211 11223455667776554 79999999999999999999999999999998875
No 121
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=98.32 E-value=8.3e-06 Score=66.79 Aligned_cols=103 Identities=22% Similarity=0.144 Sum_probs=71.8
Q ss_pred ccCccccHHHHHHHHHhcCCCEEEEec-----cCHHH----HHHHHHcCCcEEEeeccCcC------CCCCccchHHHHH
Q psy16780 46 QLDETINWSDVTWLKTITKLPIVLKGI-----LTAED----AKIGVEMGASAIMVSNHGGR------QLDYVPASIEALP 110 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~~Pv~vK~~-----~~~~~----a~~l~~aG~d~I~v~~~gg~------~~~~~~~~~~~l~ 110 (202)
.++-+...+.|+++++.++-. .+|.+ ++.+. ++.+.++|+|+|..|.+-+. ..+.+..+.+.+.
T Consensus 94 ~g~~~~v~~ei~~v~~a~~~~-~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~ 172 (226)
T 1vcv_A 94 SRRWAEVRRDLISVVGAAGGR-VVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAA 172 (226)
T ss_dssp TTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCC-CceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHH
Confidence 566777788999999987432 56744 45544 45678999999998753210 0112334444444
Q ss_pred HHHHH---hCCCcEEEEecCCCCHHHHHHHHHh---CCC----EEEEcH
Q psy16780 111 EIAKA---VGHKVDVYLDGGVRYGTDVFKALAL---GAK----MVFVGR 149 (202)
Q Consensus 111 ~i~~~---~~~~ipiia~GGI~~~~D~~kal~~---GAd----~V~ig~ 149 (202)
.+++. ++++++|-++||||+.+|+.+.+.+ ||+ -++..+
T Consensus 173 lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~ 221 (226)
T 1vcv_A 173 AIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTST 221 (226)
T ss_dssp HHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEESC
T ss_pred HHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecCc
Confidence 44443 7778999999999999999999999 999 776554
No 122
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.31 E-value=5.2e-06 Score=66.66 Aligned_cols=100 Identities=18% Similarity=0.210 Sum_probs=70.4
Q ss_pred HHHHHHHHHhcCCCEEEEec-cCH-HHHHHHHHcCCcEEEeeccCc------------------------CCC-------
Q psy16780 53 WSDVTWLKTITKLPIVLKGI-LTA-EDAKIGVEMGASAIMVSNHGG------------------------RQL------- 99 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~-~~~-~~a~~l~~aG~d~I~v~~~gg------------------------~~~------- 99 (202)
.+.++++++.++.|+.+-+- .++ +.++.+.++|+|+|+++...+ +..
T Consensus 50 ~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~ 129 (220)
T 2fli_A 50 ADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLL 129 (220)
T ss_dssp HHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGT
T ss_pred HHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH
Confidence 78999999888888887654 333 457889999999998864211 000
Q ss_pred ---C-----------Cc----cchHHHHHHHHHHhC---CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 100 ---D-----------YV----PASIEALPEIAKAVG---HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 100 ---~-----------~~----~~~~~~l~~i~~~~~---~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
+ ++ +...+.+.++++... .++|++++|||+ ++++.+++.+|||+|.+||+++.
T Consensus 130 ~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~ 203 (220)
T 2fli_A 130 DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFK 203 (220)
T ss_dssp TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 0 01 111233444544331 268999999999 79999999999999999999985
No 123
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.28 E-value=8e-06 Score=66.21 Aligned_cols=77 Identities=27% Similarity=0.277 Sum_probs=60.7
Q ss_pred CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 74 TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 74 ~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
..+.++.+.++|+|++.++...+.. .......+.+.++++.+ ++|+++.||+++.+++.+++++|||+|.++++++.
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 4578899999999999987532211 11223455677777766 79999999999999999999999999999998774
No 124
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.27 E-value=1.8e-05 Score=66.05 Aligned_cols=94 Identities=26% Similarity=0.361 Sum_probs=69.4
Q ss_pred cccHHHHHHHHHh---cCCCEEEEecc---------CHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHH
Q psy16780 50 TINWSDVTWLKTI---TKLPIVLKGIL---------TAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIA 113 (202)
Q Consensus 50 ~~~~~~i~~i~~~---~~~Pv~vK~~~---------~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~ 113 (202)
+...+.++++++. .++|+++=.-. +.+. ++.+.++|+|+|.++.. .+.+.+++++
T Consensus 121 ~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~---------~~~e~~~~~~ 191 (263)
T 1w8s_A 121 WKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYT---------GDPKTFSWAV 191 (263)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECC---------SSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHH
Confidence 3355566666654 38998874223 4443 46678999999998731 2456777777
Q ss_pred HHhCCCcEEEEecCCC--CHHHHHHHH----HhCCCEEEEcHHHHH
Q psy16780 114 KAVGHKVDVYLDGGVR--YGTDVFKAL----ALGAKMVFVGRPALW 153 (202)
Q Consensus 114 ~~~~~~ipiia~GGI~--~~~D~~kal----~~GAd~V~ig~~~l~ 153 (202)
+.+ +.+||+++|||+ +.+|+.+.+ .+||+++.+||.++.
T Consensus 192 ~~~-~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~ 236 (263)
T 1w8s_A 192 KVA-GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQ 236 (263)
T ss_dssp HHT-TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHT
T ss_pred HhC-CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcC
Confidence 766 345999999999 889988877 789999999999875
No 125
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.25 E-value=2.6e-06 Score=70.92 Aligned_cols=121 Identities=15% Similarity=0.135 Sum_probs=78.5
Q ss_pred HhhhccCccccHHHHHHHHHhcCCCEEEEecc------C-HHHHHHHHHcCCcEEEeeccC--------------c----
Q psy16780 42 YITSQLDETINWSDVTWLKTITKLPIVLKGIL------T-AEDAKIGVEMGASAIMVSNHG--------------G---- 96 (202)
Q Consensus 42 ~~~~~~d~~~~~~~i~~i~~~~~~Pv~vK~~~------~-~~~a~~l~~aG~d~I~v~~~g--------------g---- 96 (202)
.+....+.+..++.++++|+. +|+++=.=. . ...++.+.++|+|++++-.-. |
T Consensus 68 AL~~g~~~~~~~~~~~~~r~~--~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I 145 (252)
T 3tha_A 68 ALDQGVDIHSVFELLARIKTK--KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALI 145 (252)
T ss_dssp HHHTTCCHHHHHHHHHHCCCS--SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEEC
T ss_pred HHHCCCCHHHHHHHHHHHhcC--CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEE
Confidence 455666777788888888865 788763211 1 356788999999999874210 0
Q ss_pred ------CC-------------C------CC--ccc-h-----HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCC
Q psy16780 97 ------RQ-------------L------DY--VPA-S-----IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAK 143 (202)
Q Consensus 97 ------~~-------------~------~~--~~~-~-----~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd 143 (202)
+. + .+ |.. . .+.+.++++.. ++|++.-+||++++++.++.. +||
T Consensus 146 ~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~~-~AD 222 (252)
T 3tha_A 146 TLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMRK-VAD 222 (252)
T ss_dssp EEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHTT-TSS
T ss_pred EEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHHh-cCC
Confidence 00 0 01 111 1 12344444433 799999999999999987655 699
Q ss_pred EEEEcHHHHHHhhhcChHHHHHHH
Q psy16780 144 MVFVGRPALWGLAHSGKSGVRKVL 167 (202)
Q Consensus 144 ~V~ig~~~l~~~~~~G~~~v~~~i 167 (202)
+|.+||+++..+...+.+...+.+
T Consensus 223 GVIVGSAiVk~i~~~~~~~~~~~~ 246 (252)
T 3tha_A 223 GVIVGTSIVKCFKQGNLDIIMKDI 246 (252)
T ss_dssp EEEECHHHHHHTTSSCHHHHHHHH
T ss_pred EEEECHHHHHHHHhcCHHHHHHHH
Confidence 999999999876544444333333
No 126
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.24 E-value=2.2e-06 Score=69.32 Aligned_cols=97 Identities=14% Similarity=0.185 Sum_probs=63.7
Q ss_pred HHHHHHHHhcCCCEEEEe--ccCHHHHHHHHHcCCcEEEeecc--CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC
Q psy16780 54 SDVTWLKTITKLPIVLKG--ILTAEDAKIGVEMGASAIMVSNH--GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR 129 (202)
Q Consensus 54 ~~i~~i~~~~~~Pv~vK~--~~~~~~a~~l~~aG~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~ 129 (202)
+.++.+++. +++..+.. +.|++.++.+.+.|+|++.+... ++. .+.......+..+++....++|+++.|||
T Consensus 100 ~~~~~~~~~-g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~~~--~g~~~~~~~l~~i~~~~~~~~pi~v~GGI- 175 (218)
T 3jr2_A 100 ACKKVADEL-NGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAEL--AGIGWTTDDLDKMRQLSALGIELSITGGI- 175 (218)
T ss_dssp HHHHHHHHH-TCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHH--HTCCSCHHHHHHHHHHHHTTCEEEEESSC-
T ss_pred HHHHHHHHh-CCccceeeeecCCHHHHHHHHHcCccceeeeecccccc--CCCcCCHHHHHHHHHHhCCCCCEEEECCC-
Confidence 455555543 66655432 36788889999999999876321 111 11111223334443332237999999999
Q ss_pred CHHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 130 YGTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 130 ~~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
+.+++.+++.+|||++.+||++..+
T Consensus 176 ~~~~~~~~~~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 176 VPEDIYLFEGIKTKTFIAGRALAGA 200 (218)
T ss_dssp CGGGGGGGTTSCEEEEEESGGGSHH
T ss_pred CHHHHHHHHHcCCCEEEEchhhcCC
Confidence 5899999999999999999998753
No 127
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.24 E-value=1.6e-05 Score=65.92 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=79.6
Q ss_pred cHHHHHHHHHhc-CCCEEEEec-cCH-HHHHHHHHcCCcEEEeeccCc------------------------CCC-----
Q psy16780 52 NWSDVTWLKTIT-KLPIVLKGI-LTA-EDAKIGVEMGASAIMVSNHGG------------------------RQL----- 99 (202)
Q Consensus 52 ~~~~i~~i~~~~-~~Pv~vK~~-~~~-~~a~~l~~aG~d~I~v~~~gg------------------------~~~----- 99 (202)
-.+.++++|+.+ ++|+-+.+- .++ ..++.+.++|+|.|++..-.. |..
T Consensus 73 G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~ 152 (246)
T 3inp_A 73 GPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKY 152 (246)
T ss_dssp CHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTT
T ss_pred CHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHH
Confidence 467999999998 899998874 333 567888999999999963110 110
Q ss_pred -----C-----------Cc----cchHHHHHHHHHHh---CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhh
Q psy16780 100 -----D-----------YV----PASIEALPEIAKAV---GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLA 156 (202)
Q Consensus 100 -----~-----------~~----~~~~~~l~~i~~~~---~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~ 156 (202)
| ++ +.+++-++++++.. +.+++|.++|||+ .+.+.++.++|||.+.+||++..+
T Consensus 153 ~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a-- 229 (246)
T 3inp_A 153 VESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNS-- 229 (246)
T ss_dssp TGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTS--
T ss_pred HHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCC--
Confidence 0 11 23445555555443 2368999999998 688999999999999999987642
Q ss_pred hcChHHHHHHHHHHHHHH
Q psy16780 157 HSGKSGVRKVLDILINEF 174 (202)
Q Consensus 157 ~~G~~~v~~~i~~l~~~L 174 (202)
.. ..+.++.|++.+
T Consensus 230 -~d---p~~~i~~l~~~i 243 (246)
T 3inp_A 230 -DS---YKQTIDKMRDEL 243 (246)
T ss_dssp -SC---HHHHHHHHHHHH
T ss_pred -CC---HHHHHHHHHHHH
Confidence 22 234455555544
No 128
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.23 E-value=9.8e-06 Score=66.01 Aligned_cols=75 Identities=29% Similarity=0.262 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|+|.+.+....+.. .+.... ..+.++++.+ ++|+++.|||++++++.+++++|||.|.+|+..+.
T Consensus 34 ~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 34 VDAALGWQRDGAEWIHLVDLDAAF-GRGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHT-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCcccc-cCCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 477889999999999997532211 112334 7778887776 89999999999999999999999999999998764
No 129
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=98.21 E-value=1.4e-05 Score=67.94 Aligned_cols=87 Identities=17% Similarity=0.224 Sum_probs=70.3
Q ss_pred HHHHHHHHHhcCC-CEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCH
Q psy16780 53 WSDVTWLKTITKL-PIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~-Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~ 131 (202)
.+.++.+++..+- ++++ ++-+.++++.+.++|+|+|.+++ .+.+.+.++++.++++++|.++||| +.
T Consensus 196 ~~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~----------~~~e~l~~~v~~~~~~~~I~ASGGI-t~ 263 (296)
T 1qap_A 196 RQAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDN----------FNTDQMREAVKRVNGQARLEVSGNV-TA 263 (296)
T ss_dssp HHHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESS----------CCHHHHHHHHHTTCTTCCEEECCCS-CH
T ss_pred HHHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEEEECCC-CH
Confidence 3467777777643 5666 56778999999999999999976 2446666766667668999999999 99
Q ss_pred HHHHHHHHhCCCEEEEcHHH
Q psy16780 132 TDVFKALALGAKMVFVGRPA 151 (202)
Q Consensus 132 ~D~~kal~~GAd~V~ig~~~ 151 (202)
+.+.+....|+|.+.+|+..
T Consensus 264 ~~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 264 ETLREFAETGVDFISVGALT 283 (296)
T ss_dssp HHHHHHHHTTCSEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEeHHH
Confidence 99999999999999999844
No 130
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=98.20 E-value=5.2e-06 Score=72.28 Aligned_cols=100 Identities=15% Similarity=0.001 Sum_probs=69.4
Q ss_pred ccHHHHHHHHHhc-CCCEEEEecc-----------C----HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHH
Q psy16780 51 INWSDVTWLKTIT-KLPIVLKGIL-----------T----AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAK 114 (202)
Q Consensus 51 ~~~~~i~~i~~~~-~~Pv~vK~~~-----------~----~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~ 114 (202)
|..+++++||+.+ +-+|.+|+.. . ...++.+.+.|++.+.++...-...............+++
T Consensus 204 f~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~ 283 (358)
T 4a3u_A 204 LLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRK 283 (358)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHH
Confidence 5678999999987 4568899861 1 1235677889999999876421111111111123345555
Q ss_pred HhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHH
Q psy16780 115 AVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALW 153 (202)
Q Consensus 115 ~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~ 153 (202)
.. ..||+ .||+.+++++.++++.| ||+|++||+|+.
T Consensus 284 ~~--~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~la 320 (358)
T 4a3u_A 284 VF--KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIG 320 (358)
T ss_dssp HC--CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHH
T ss_pred hc--CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHh
Confidence 55 55665 57889999999999999 999999999996
No 131
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.19 E-value=6.6e-06 Score=72.21 Aligned_cols=98 Identities=18% Similarity=0.165 Sum_probs=72.3
Q ss_pred CccccHHHHHHHHHhcCCCEEEEecc--CHHHHHHHHHcCCcEEEeeccCcCCCCCcc-chHHHHHHHHHHhCCCcEEEE
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGIL--TAEDAKIGVEMGASAIMVSNHGGRQLDYVP-ASIEALPEIAKAVGHKVDVYL 124 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~--~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipiia 124 (202)
|++...+.++++++. ++|++++... ..+.++.+.++|+|.+.+++....+....+ .++..+.++++.. ++||++
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~ 216 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIA 216 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEE
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEE
Confidence 777777788888876 8999998763 356678888999999988643211111111 1455567777776 799999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 125 DGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 125 ~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
||+.+++|+.+++.+|||+|.+|+
T Consensus 217 -ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 217 -GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp -ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred -CCcCCHHHHHHHHHcCCCEEEECC
Confidence 999999999999999999999976
No 132
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.17 E-value=1.3e-05 Score=65.49 Aligned_cols=75 Identities=27% Similarity=0.275 Sum_probs=59.5
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|+|.+.+....+.. .+.... +.+.++++.. ++|++..|||++++++.+++.+|||.|.+|+..+.
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhh
Confidence 466888999999999997532211 112344 6678887776 89999999999999999999999999999998764
No 133
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.16 E-value=7e-06 Score=69.02 Aligned_cols=88 Identities=22% Similarity=0.118 Sum_probs=68.1
Q ss_pred HHHHHHHHHhcC--CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhC---CCcEEEEecC
Q psy16780 53 WSDVTWLKTITK--LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVG---HKVDVYLDGG 127 (202)
Q Consensus 53 ~~~i~~i~~~~~--~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipiia~GG 127 (202)
.+.++.+++..+ +++.+ .+.+.++++.+.++|+|+|.+++. +.+.++++++.++ +++||.++||
T Consensus 169 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~~~~i~AsGG 237 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNL----------SVLETKEIAAYRDAHYPFVLLEASGN 237 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETC----------CHHHHHHHHHHHHHHCTTCEEEEESS
T ss_pred HHHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCcEEEEECC
Confidence 457888888764 46666 667889999999999999999763 1234444333332 3599999999
Q ss_pred CCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 128 VRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 128 I~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
| +.+.+.+..++|||.+.+|+.+.
T Consensus 238 I-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 238 I-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp C-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred C-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 9 89999999999999999999854
No 134
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.15 E-value=2.4e-06 Score=88.18 Aligned_cols=91 Identities=10% Similarity=0.085 Sum_probs=65.5
Q ss_pred hcCCCEEEEeccCH---HHHHHHHHcCCcEE---Eeecc--CcCC-C-CCccchHHHHHHHHHHhCCCcEEEEecCCCCH
Q psy16780 62 ITKLPIVLKGILTA---EDAKIGVEMGASAI---MVSNH--GGRQ-L-DYVPASIEALPEIAKAVGHKVDVYLDGGVRYG 131 (202)
Q Consensus 62 ~~~~Pv~vK~~~~~---~~a~~l~~aG~d~I---~v~~~--gg~~-~-~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~ 131 (202)
..+++++.....+. ..+..+.++|+|++ ++.|. ||.. . +-..++...++++++.+ ++|||+.|||.++
T Consensus 697 ~lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~--~ipviaaGGi~dg 774 (2051)
T 2uv8_G 697 TLGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHP--NIMLIFGSGFGSA 774 (2051)
T ss_dssp HSCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCT--TBCCEEESSCCSH
T ss_pred HcCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcC--CceEEEeCCCCCH
Confidence 34888886544333 44577788899994 33332 3331 1 11233444567777766 8999999999999
Q ss_pred HHHHHHH-----------HhCCCEEEEcHHHHHH
Q psy16780 132 TDVFKAL-----------ALGAKMVFVGRPALWG 154 (202)
Q Consensus 132 ~D~~kal-----------~~GAd~V~ig~~~l~~ 154 (202)
.+++.+| ++|||+|+||+.|+..
T Consensus 775 ~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t 808 (2051)
T 2uv8_G 775 DDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIA 808 (2051)
T ss_dssp HHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTS
T ss_pred HHHHHHHccccccccCccCCCCceeeechHHHhC
Confidence 9999999 8999999999999853
No 135
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.14 E-value=2.9e-06 Score=69.40 Aligned_cols=75 Identities=19% Similarity=0.179 Sum_probs=59.1
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|+|.|.++...... .....+++.+.+++ .+ ++|+++.|||++.+++.+++++|||.|.+|+.++.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EF--AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GG--GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecccccc-cCCchhHHHHHHHH-hc--CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 477899999999999997521100 01234566777776 55 79999999999999999999999999999998874
No 136
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.13 E-value=1e-05 Score=66.44 Aligned_cols=94 Identities=16% Similarity=0.211 Sum_probs=72.6
Q ss_pred ccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCC
Q psy16780 49 ETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGV 128 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI 128 (202)
|.+..++++..++. ++|++. ++.|+.++..+.++|+|.|.+.-.. .. ...+.++.++..+ +++|+++.|||
T Consensus 113 P~~~~~vi~~~~~~-gi~~ip-Gv~TptEi~~A~~~Gad~vK~FPa~--~~----gG~~~lkal~~p~-p~ip~~ptGGI 183 (232)
T 4e38_A 113 PGFNPNTVRACQEI-GIDIVP-GVNNPSTVEAALEMGLTTLKFFPAE--AS----GGISMVKSLVGPY-GDIRLMPTGGI 183 (232)
T ss_dssp SSCCHHHHHHHHHH-TCEEEC-EECSHHHHHHHHHTTCCEEEECSTT--TT----THHHHHHHHHTTC-TTCEEEEBSSC
T ss_pred CCCCHHHHHHHHHc-CCCEEc-CCCCHHHHHHHHHcCCCEEEECcCc--cc----cCHHHHHHHHHHh-cCCCeeeEcCC
Confidence 44566677776654 899887 4679999999999999999984421 10 1246677776555 47999999999
Q ss_pred CCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 129 RYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 129 ~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
. .+++.+.+++||.++.+|+.+.
T Consensus 184 ~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 184 T-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp C-TTTHHHHHTSTTBCCEEECGGG
T ss_pred C-HHHHHHHHHCCCeEEEECchhc
Confidence 5 8999999999999999898765
No 137
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.12 E-value=1.5e-05 Score=64.66 Aligned_cols=102 Identities=20% Similarity=0.277 Sum_probs=71.6
Q ss_pred ccHHHHHHHHHhcCCCEEEEec-cCH-HHHHHHHHcCCcEEEeecc--CcCC----------------------------
Q psy16780 51 INWSDVTWLKTITKLPIVLKGI-LTA-EDAKIGVEMGASAIMVSNH--GGRQ---------------------------- 98 (202)
Q Consensus 51 ~~~~~i~~i~~~~~~Pv~vK~~-~~~-~~a~~l~~aG~d~I~v~~~--gg~~---------------------------- 98 (202)
...+.++++++.++.|+.+-.. .++ +.++.+.++|+|+|+++.. ....
T Consensus 55 ~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~ 134 (230)
T 1rpx_A 55 IGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAI 134 (230)
T ss_dssp CCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGG
T ss_pred cCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHH
Confidence 3478999999888788777654 344 4688889999999987654 2100
Q ss_pred --C----C-----------Ccc----chHHHHHHHHHHhC---CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 99 --L----D-----------YVP----ASIEALPEIAKAVG---HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 99 --~----~-----------~~~----~~~~~l~~i~~~~~---~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
. + ++. ...+.+.++++.+. .++|+++.|||+ ++++.+++.+|||+|.+||++..
T Consensus 135 ~~~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~ 212 (230)
T 1rpx_A 135 EYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 212 (230)
T ss_dssp TTTTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred HHHHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhC
Confidence 0 0 011 11233444544331 269999999998 78998999999999999999874
No 138
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.11 E-value=1e-05 Score=68.11 Aligned_cols=70 Identities=19% Similarity=0.241 Sum_probs=56.9
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
++...+.|.+.|.+...+ .+...+.+.++++.+.+.+||++.|||+|.+|+.+++.+|||.|.+||+++.
T Consensus 192 a~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp HHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred HHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 344567788888887532 2446678888888764479999999999999999999999999999999874
No 139
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=98.11 E-value=8.1e-06 Score=68.20 Aligned_cols=94 Identities=26% Similarity=0.270 Sum_probs=67.1
Q ss_pred ccCccccHHHHHHHHHhcC-CCEEEEecc------CHH----HHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHH
Q psy16780 46 QLDETINWSDVTWLKTITK-LPIVLKGIL------TAE----DAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAK 114 (202)
Q Consensus 46 ~~d~~~~~~~i~~i~~~~~-~Pv~vK~~~------~~~----~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~ 114 (202)
.++-+...+.|+++++.++ .+..+|.++ +.+ .++.+.++|+|+|..|.+- ..+..+.+.+..+++
T Consensus 113 ~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf----~~~gAt~e~v~lm~~ 188 (260)
T 1p1x_A 113 AGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGK----VAVNATPESARIMME 188 (260)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSC----SSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCC----CCCCCCHHHHHHHHH
Confidence 5677778889999998874 245678762 344 2456789999999987531 112345554444444
Q ss_pred H-----hCCCcEEEEecCCCCHHHHHHHHHhCCC
Q psy16780 115 A-----VGHKVDVYLDGGVRYGTDVFKALALGAK 143 (202)
Q Consensus 115 ~-----~~~~ipiia~GGI~~~~D~~kal~~GAd 143 (202)
. ++.+++|-++||||+.+|+.+.+.+||+
T Consensus 189 ~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 189 VIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp HHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 3 4568999999999999999999999876
No 140
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=98.11 E-value=1.2e-05 Score=67.77 Aligned_cols=93 Identities=17% Similarity=0.151 Sum_probs=65.1
Q ss_pred ccCcc---ccHHHHHHHHHhcCCCEEEEecc------CHH----HHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHH
Q psy16780 46 QLDET---INWSDVTWLKTITKLPIVLKGIL------TAE----DAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEI 112 (202)
Q Consensus 46 ~~d~~---~~~~~i~~i~~~~~~Pv~vK~~~------~~~----~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i 112 (202)
.++-+ ...+.|+++++.++ +..+|.++ +.+ .++.+.++|+|+|..+.+- ..+..+.+.+..+
T Consensus 134 sg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf----~~~gAT~edv~lm 208 (281)
T 2a4a_A 134 ENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGK----VQINATPSSVEYI 208 (281)
T ss_dssp HSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSC----SSCCCCHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCC----CCCCCCHHHHHHH
Confidence 45556 67788999998875 35678762 334 2466789999999987531 1122344443333
Q ss_pred HHHh----------CCCcEEEEecCCCCHHHHHHHHHhCCC
Q psy16780 113 AKAV----------GHKVDVYLDGGVRYGTDVFKALALGAK 143 (202)
Q Consensus 113 ~~~~----------~~~ipiia~GGI~~~~D~~kal~~GAd 143 (202)
++.+ +.+++|-++|||||.+|+.+.+.+||+
T Consensus 209 ~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 209 IKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp HHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 3333 668999999999999999999999886
No 141
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.10 E-value=2.3e-05 Score=63.99 Aligned_cols=93 Identities=16% Similarity=0.175 Sum_probs=70.8
Q ss_pred cccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC
Q psy16780 50 TINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR 129 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~ 129 (202)
....+.++..++ .+.|+++. +.|++++..+.+.|+|+|.+.. ... ....+.+++++..+ +++|+++.|||
T Consensus 97 ~~d~~v~~~ar~-~g~~~i~G-v~t~~e~~~A~~~Gad~vk~Fp--a~~----~gG~~~lk~l~~~~-~~ipvvaiGGI- 166 (224)
T 1vhc_A 97 GLNPKIVKLCQD-LNFPITPG-VNNPMAIEIALEMGISAVKFFP--AEA----SGGVKMIKALLGPY-AQLQIMPTGGI- 166 (224)
T ss_dssp SCCHHHHHHHHH-TTCCEECE-ECSHHHHHHHHHTTCCEEEETT--TTT----TTHHHHHHHHHTTT-TTCEEEEBSSC-
T ss_pred CCCHHHHHHHHH-hCCCEEec-cCCHHHHHHHHHCCCCEEEEee--Ccc----ccCHHHHHHHHhhC-CCCeEEEECCc-
Confidence 344556777777 78998885 8889999999999999999933 110 11245677776555 36999999999
Q ss_pred CHHHHHHHHHh-CCCEEEEcHHHHH
Q psy16780 130 YGTDVFKALAL-GAKMVFVGRPALW 153 (202)
Q Consensus 130 ~~~D~~kal~~-GAd~V~ig~~~l~ 153 (202)
+.+++.+.+++ |+++|. ||.+..
T Consensus 167 ~~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 167 GLHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp CTTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred CHHHHHHHHhcCCCEEEE-EchhcC
Confidence 55889999998 899999 887764
No 142
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.09 E-value=8e-05 Score=60.44 Aligned_cols=114 Identities=17% Similarity=0.201 Sum_probs=74.1
Q ss_pred HHHHHHHHHhcCCCEEEEec--cCHHHHHHHHHc--CCcEEEeec-cCcC-CCCCccchHHHHHHHHHHhCCCcEEEEec
Q psy16780 53 WSDVTWLKTITKLPIVLKGI--LTAEDAKIGVEM--GASAIMVSN-HGGR-QLDYVPASIEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~--~~~~~a~~l~~a--G~d~I~v~~-~gg~-~~~~~~~~~~~l~~i~~~~~~~ipiia~G 126 (202)
.+.++.+++. ++++++-.. ...+..+...+. ++|+|.+.. ++|+ .....+...+.+.++++.. .++|+++.|
T Consensus 103 ~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~-~~~pi~v~G 180 (228)
T 1h1y_A 103 QELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKY-PSLDIEVDG 180 (228)
T ss_dssp HHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHC-TTSEEEEES
T ss_pred HHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhc-CCCCEEEEC
Confidence 4567777654 677775542 223445666665 999998854 2221 1112233455667776654 379999999
Q ss_pred CCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 127 GVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
||.. +++.+++.+|||.+.+||+++.+ .. ..+.++.+++.++
T Consensus 181 GI~~-~ni~~~~~aGaD~vvvGsai~~~---~d---~~~~~~~l~~~~~ 222 (228)
T 1h1y_A 181 GLGP-STIDVAASAGANCIVAGSSIFGA---AE---PGEVISALRKSVE 222 (228)
T ss_dssp SCST-TTHHHHHHHTCCEEEESHHHHTS---SC---HHHHHHHHHHHHH
T ss_pred CcCH-HHHHHHHHcCCCEEEECHHHHCC---CC---HHHHHHHHHHHHH
Confidence 9987 88989999999999999998742 12 3344555555443
No 143
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=98.07 E-value=2.8e-05 Score=63.93 Aligned_cols=90 Identities=20% Similarity=0.263 Sum_probs=63.6
Q ss_pred ccHHHHHHHHHhc---CCCEEEEec-----cCHHH----HHHHHHcCCcEEEeeccCcCCCCC-ccchHHHHHH--HHHH
Q psy16780 51 INWSDVTWLKTIT---KLPIVLKGI-----LTAED----AKIGVEMGASAIMVSNHGGRQLDY-VPASIEALPE--IAKA 115 (202)
Q Consensus 51 ~~~~~i~~i~~~~---~~Pv~vK~~-----~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~-~~~~~~~l~~--i~~~ 115 (202)
...+.|.++++.+ +.|+ |.+ ++.+. ++.+.++|+|+|..+.+. .. +..+.+.+.. +++.
T Consensus 117 ~v~~ei~~v~~a~~~~g~~l--KvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~----~~~~gAt~~dv~l~~m~~~ 190 (234)
T 1n7k_A 117 AVYREVSGIVKLAKSYGAVV--KVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGV----YTKGGDPVTVFRLASLAKP 190 (234)
T ss_dssp HHHHHHHHHHHHHHHTTCEE--EEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSS----SCCCCSHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhhcCCeE--EEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCC----CCCCCCCHHHHHHHHHHHH
Confidence 5566777887765 3554 755 35444 466789999999987521 11 2345555454 6666
Q ss_pred hCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 116 VGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 116 ~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
++ +||.++|||++.+|+.+.+.+||+-++..
T Consensus 191 v~--v~VKaaGGirt~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 191 LG--MGVKASGGIRSGIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp GT--CEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred HC--CCEEEecCCCCHHHHHHHHHcCccccchH
Confidence 64 99999999999999999999999955544
No 144
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.05 E-value=1.1e-05 Score=66.03 Aligned_cols=103 Identities=18% Similarity=0.237 Sum_probs=72.6
Q ss_pred cccHHHHHHHHHhcCCCEEEEec-cCH-HHHHHHHHcCCcEEEeecc--CcCC---------------------------
Q psy16780 50 TINWSDVTWLKTITKLPIVLKGI-LTA-EDAKIGVEMGASAIMVSNH--GGRQ--------------------------- 98 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~~Pv~vK~~-~~~-~~a~~l~~aG~d~I~v~~~--gg~~--------------------------- 98 (202)
.+..+.++++|+.++.|+.+-+- .++ ..++.+.++|+|+|+++.- ....
T Consensus 48 ~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~ 127 (230)
T 1tqj_A 48 TIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDF 127 (230)
T ss_dssp CBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGG
T ss_pred hhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHH
Confidence 34468999999988888875443 343 3578889999999988643 1100
Q ss_pred -------CC-----------Cc----cchHHHHHHHHHHh---CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 99 -------LD-----------YV----PASIEALPEIAKAV---GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 99 -------~~-----------~~----~~~~~~l~~i~~~~---~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.| ++ +...+.+.++++.. +.++||.+.|||.. +++.++..+|||.+.+||+++.
T Consensus 128 ~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 128 LEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp GTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred HHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 00 11 22345566665544 22699999999998 8899999999999999999874
No 145
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.05 E-value=7.5e-06 Score=67.64 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=59.6
Q ss_pred CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 74 TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 74 ~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
..+.++.+.++|++.|.++.-.... .......+.+.++++.+ ++|+++.|||++.+++.+++.+|||+|.+|+.++
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~-~~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDG-TKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSS-CSSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHHCCCCEEEEEecCccc-CCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 3577899999999999996532111 11224567777777665 7999999999999999999999999999999877
No 146
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.03 E-value=6.3e-05 Score=61.63 Aligned_cols=77 Identities=13% Similarity=0.180 Sum_probs=57.6
Q ss_pred HHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcCh
Q psy16780 81 GVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGK 160 (202)
Q Consensus 81 l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~ 160 (202)
+.-.|.+.|.+.+ .|+. .+.+.+.++++.+. ++|++.-|||++++++.+++ .|||.|.+|+++.. .+
T Consensus 149 a~~~g~~~VYld~-sG~~-----~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~-----~p 215 (228)
T 3vzx_A 149 SELLQLPIFYLEY-SGVL-----GDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE-----DF 215 (228)
T ss_dssp HHHTTCSEEEEEC-TTSC-----CCHHHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH-----CH
T ss_pred HHHcCCCEEEecC-CCCc-----CCHHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc-----CH
Confidence 3445688898877 3431 25777888877652 59999999999999999987 79999999999986 45
Q ss_pred HHHHHHHHHH
Q psy16780 161 SGVRKVLDIL 170 (202)
Q Consensus 161 ~~v~~~i~~l 170 (202)
+-+.++++.+
T Consensus 216 ~~~~~~v~a~ 225 (228)
T 3vzx_A 216 DRALKTVAAV 225 (228)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 147
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=98.01 E-value=6.7e-05 Score=63.43 Aligned_cols=88 Identities=25% Similarity=0.289 Sum_probs=68.4
Q ss_pred HHHHHHHHHhcC--CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 53 WSDVTWLKTITK--LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 53 ~~~i~~i~~~~~--~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
.+.++..|+..+ .+|.+ .+.+.++++.+.++|+|+|.+++. +.+.++++.+.+++++|+.++||| +
T Consensus 183 ~~av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~AsGGI-t 250 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEASGNM-T 250 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEEESSC-C
T ss_pred HHHHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCC-C
Confidence 346777777763 46666 667899999999999999999763 233455555556567999999998 5
Q ss_pred HHHHHHHHHhCCCEEEEcHHHH
Q psy16780 131 GTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~ig~~~l 152 (202)
.+.+.+..++|+|++.+|+...
T Consensus 251 ~eni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 251 LERAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp HHHHHHHHHHTCSEEECTHHHH
T ss_pred HHHHHHHHHcCCCEEEEcHHHc
Confidence 8999999999999999988543
No 148
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=98.00 E-value=1.5e-05 Score=67.87 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=66.7
Q ss_pred HHHHHHHHHhcC--CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh---CCCcEEEEecC
Q psy16780 53 WSDVTWLKTITK--LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV---GHKVDVYLDGG 127 (202)
Q Consensus 53 ~~~i~~i~~~~~--~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~---~~~ipiia~GG 127 (202)
.+.++.+++..+ .++++ ++.+.++++.+.++|+|+|.+++. +.+.+.++++.+ .+++||.++||
T Consensus 184 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~~~~I~ASGG 252 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDNF----------KPEELHPTATVLKAQFPSVAVEASGG 252 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSEEEEESS
T ss_pred HHHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCeeEEEECC
Confidence 346677777664 56776 677889999999999999999763 134444433333 23599999999
Q ss_pred CCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 128 VRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 128 I~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
| +.+.+.+..++|||.+.+|+.+.
T Consensus 253 I-t~~ni~~~~~aGaD~i~vGs~i~ 276 (299)
T 2jbm_A 253 I-TLDNLPQFCGPHIDVISMGMLTQ 276 (299)
T ss_dssp C-CTTTHHHHCCTTCCEEECTHHHH
T ss_pred C-CHHHHHHHHHCCCCEEEEChhhc
Confidence 9 99999999999999999999553
No 149
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.99 E-value=7e-05 Score=63.61 Aligned_cols=89 Identities=20% Similarity=0.288 Sum_probs=61.3
Q ss_pred cHHHHHHHHHh---cCCCEEEEec------cCHH----HHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 52 NWSDVTWLKTI---TKLPIVLKGI------LTAE----DAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 52 ~~~~i~~i~~~---~~~Pv~vK~~------~~~~----~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
..+.+.++++. .++|+++=.. .+++ .++.+.++|+|+|.++-. + +.+.++++..
T Consensus 156 ~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t-~----------e~~~~vv~~~-- 222 (295)
T 3glc_A 156 SIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYV-E----------KGFERIVAGC-- 222 (295)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECC-T----------TTHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCC-H----------HHHHHHHHhC--
Confidence 44455566554 4799987211 2333 457788999999988621 1 2356665554
Q ss_pred CcEEEEecCCCC-HHH----HHHHHHhCCCEEEEcHHHHH
Q psy16780 119 KVDVYLDGGVRY-GTD----VFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 119 ~ipiia~GGI~~-~~D----~~kal~~GAd~V~ig~~~l~ 153 (202)
++||+++||+.. .+| +.+++.+||+++.+||.++.
T Consensus 223 ~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q 262 (295)
T 3glc_A 223 PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQ 262 (295)
T ss_dssp SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhc
Confidence 799999999985 433 44666899999999999874
No 150
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.97 E-value=4.1e-05 Score=60.77 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=56.8
Q ss_pred HHHHHHHHHcCCcEEEeecc--CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNH--GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
.+.++.+...|+..+.+.+. .|+. .+ ..++.+.++.... ++|+|+.||+.+++|+.+++..||++|++|++++
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~--~g-~~~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~ 207 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTK--SG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFH 207 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCC--SC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCcc--cc-ccHHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHH
Confidence 36678888889987776552 2221 12 2366677776554 7999999999999999999999999999999997
Q ss_pred H
Q psy16780 153 W 153 (202)
Q Consensus 153 ~ 153 (202)
.
T Consensus 208 ~ 208 (237)
T 3cwo_X 208 F 208 (237)
T ss_dssp T
T ss_pred c
Confidence 4
No 151
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.95 E-value=6.4e-05 Score=63.52 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=68.9
Q ss_pred HHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 54 SDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 54 ~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
+.+++.|+.. ..|+.| ++-+.++++.+.++|+|.|.++|. +.+.++++.+.+++++++.+|||| +.+
T Consensus 187 ~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~ieaSGGI-t~~ 254 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEVSGNI-DRN 254 (287)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEEESSC-CTT
T ss_pred HHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEEECCC-CHH
Confidence 4566666653 578877 778899999999999999999873 335566666666678999999999 678
Q ss_pred HHHHHHHhCCCEEEEcHHH
Q psy16780 133 DVFKALALGAKMVFVGRPA 151 (202)
Q Consensus 133 D~~kal~~GAd~V~ig~~~ 151 (202)
.+.+....|+|.+.+|+..
T Consensus 255 ~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 255 SIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp THHHHHTTTCSEEECSHHH
T ss_pred HHHHHHHcCCCEEEEChhh
Confidence 8888888999999999754
No 152
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.90 E-value=0.00032 Score=58.94 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=66.3
Q ss_pred eccCHHHHHHHHHcCCcEEEeecc---CcCCCCCc---cch-HHHHHHH---HHHhCCCcEEEEec-CCCCHHHHHHHHH
Q psy16780 71 GILTAEDAKIGVEMGASAIMVSNH---GGRQLDYV---PAS-IEALPEI---AKAVGHKVDVYLDG-GVRYGTDVFKALA 139 (202)
Q Consensus 71 ~~~~~~~a~~l~~aG~d~I~v~~~---gg~~~~~~---~~~-~~~l~~i---~~~~~~~ipiia~G-GI~~~~D~~kal~ 139 (202)
.+.++++++.+.++|+|.|.+.-. +|.-..+. ... .+.+.++ .+.+++++.|++-| ||.+++|+..++.
T Consensus 169 ~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~ 248 (286)
T 2p10_A 169 YVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILD 248 (286)
T ss_dssp EECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHH
T ss_pred ecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHh
Confidence 458999999999999999998542 11111111 111 2233333 34456778777766 9999999999999
Q ss_pred h--CCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 140 L--GAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 140 ~--GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
+ |++++..+|.+.+. + .+..+..+.+.++
T Consensus 249 ~t~G~~G~~gASsier~------p-~e~ai~~~~~~fk 279 (286)
T 2p10_A 249 SCQGCHGFYGASSMERL------P-AEEAIRSQTLAFK 279 (286)
T ss_dssp HCTTCCEEEESHHHHHH------H-HHHHHHHHHHHHH
T ss_pred cCCCccEEEeehhhhcC------C-HHHHHHHHHHHHH
Confidence 8 99999999999874 2 4455555555544
No 153
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.89 E-value=2.7e-05 Score=62.58 Aligned_cols=80 Identities=18% Similarity=0.041 Sum_probs=58.3
Q ss_pred ccCHHHHHHHHHcCCcEEEeeccCcCC---CCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 72 ILTAEDAKIGVEMGASAIMVSNHGGRQ---LDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 72 ~~~~~~a~~l~~aG~d~I~v~~~gg~~---~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+.+++++..+. .|+|+|.++.-..+. ..+.+..++.+.++++.+..++|+++.|||. ++++.+++.+||++|.++
T Consensus 95 ~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~ 172 (210)
T 3ceu_A 95 CHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVL 172 (210)
T ss_dssp ECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEES
T ss_pred cCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEh
Confidence 36788888887 999999875421111 1112335667777766521379999999998 899999999999999999
Q ss_pred HHHHH
Q psy16780 149 RPALW 153 (202)
Q Consensus 149 ~~~l~ 153 (202)
|.+..
T Consensus 173 s~i~~ 177 (210)
T 3ceu_A 173 GDLWN 177 (210)
T ss_dssp HHHHT
T ss_pred HHhHc
Confidence 99974
No 154
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.88 E-value=9.6e-05 Score=62.72 Aligned_cols=85 Identities=15% Similarity=0.135 Sum_probs=68.1
Q ss_pred HHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 54 SDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 54 ~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
+.++++|+.. ..|+.| ++-+.++++.++++|+|.|-++|. +.+.++++.+.+++++.+.+|||| +.+
T Consensus 196 ~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn~----------s~~~l~~av~~~~~~v~leaSGGI-t~~ 263 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDNM----------SISEIKKAVDIVNGKSVLEVSGCV-NIR 263 (300)
T ss_dssp HHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSC-CTT
T ss_pred HHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHhhcCceEEEEECCC-CHH
Confidence 4667777664 467666 678899999999999999999873 345666666666778999999998 667
Q ss_pred HHHHHHHhCCCEEEEcHH
Q psy16780 133 DVFKALALGAKMVFVGRP 150 (202)
Q Consensus 133 D~~kal~~GAd~V~ig~~ 150 (202)
.+.+..+.|+|.+.+|+.
T Consensus 264 ~i~~~A~tGVD~IsvGal 281 (300)
T 3l0g_A 264 NVRNIALTGVDYISIGCI 281 (300)
T ss_dssp THHHHHTTTCSEEECGGG
T ss_pred HHHHHHHcCCCEEEeCcc
Confidence 888888899999999964
No 155
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.88 E-value=9.3e-05 Score=59.92 Aligned_cols=90 Identities=19% Similarity=0.203 Sum_probs=66.7
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
.+.++. ++..+.|++.. +.|++++..+.+.|+|+|.+.. ... ....+.+..++..+ +++|+++.|||. .+
T Consensus 99 ~~v~~~-~~~~g~~~i~G-~~t~~e~~~A~~~Gad~v~~Fp--a~~----~gG~~~lk~i~~~~-~~ipvvaiGGI~-~~ 168 (214)
T 1wbh_A 99 EPLLKA-ATEGTIPLIPG-ISTVSELMLGMDYGLKEFKFFP--AEA----NGGVKALQAIAGPF-SQVRFCPTGGIS-PA 168 (214)
T ss_dssp HHHHHH-HHHSSSCEEEE-ESSHHHHHHHHHTTCCEEEETT--TTT----TTHHHHHHHHHTTC-TTCEEEEBSSCC-TT
T ss_pred HHHHHH-HHHhCCCEEEe-cCCHHHHHHHHHCCCCEEEEec--Ccc----ccCHHHHHHHhhhC-CCCeEEEECCCC-HH
Confidence 334444 44578898885 8889999999999999999932 110 01245667776554 379999999994 58
Q ss_pred HHHHHHHh-CCCEEEEcHHHHH
Q psy16780 133 DVFKALAL-GAKMVFVGRPALW 153 (202)
Q Consensus 133 D~~kal~~-GAd~V~ig~~~l~ 153 (202)
++.+.+++ |+++|. ||.+..
T Consensus 169 n~~~~l~agg~~~v~-gS~i~~ 189 (214)
T 1wbh_A 169 NYRDYLALKSVLCIG-GSWLVP 189 (214)
T ss_dssp THHHHHTSTTBSCEE-EGGGSC
T ss_pred HHHHHHhcCCCeEEE-eccccC
Confidence 89999998 899999 887764
No 156
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.85 E-value=8.1e-05 Score=59.05 Aligned_cols=93 Identities=17% Similarity=0.149 Sum_probs=57.4
Q ss_pred HHHHHHHhcCCCEEEEec-c-CHHH-HHHHHHcCCcEEEeec-cCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 55 DVTWLKTITKLPIVLKGI-L-TAED-AKIGVEMGASAIMVSN-HGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~-~-~~~~-a~~l~~aG~d~I~v~~-~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
.++.+++ .+.++.+-.. . ++++ ++.+.+.|+|.|.+.. ..+......+.. +.++++++. ++|+++.|||+
T Consensus 95 ~~~~~~~-~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~-~~i~~~~~~---~~pi~v~GGI~- 168 (207)
T 3ajx_A 95 AVKAAQA-HNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN-GLLAAGEKA---RVPFSVAGGVK- 168 (207)
T ss_dssp HHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH-HHHHHHHHH---TSCEEEESSCC-
T ss_pred HHHHHHH-cCCceEEEEecCCChHHHHHHHHHhCCCEEEEEecccccccCCCchH-HHHHHhhCC---CCCEEEECCcC-
Confidence 3344433 2666533221 1 5555 6777788999984432 110000001112 444444332 68999999998
Q ss_pred HHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 131 GTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
++++.+++++|||+|.+||+++.
T Consensus 169 ~~~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 169 VATIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp GGGHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEeeeccC
Confidence 78899999999999999999875
No 157
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.85 E-value=1.7e-05 Score=67.30 Aligned_cols=87 Identities=18% Similarity=0.198 Sum_probs=54.2
Q ss_pred HHHHHHHHHhcC--CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC------cEEEE
Q psy16780 53 WSDVTWLKTITK--LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK------VDVYL 124 (202)
Q Consensus 53 ~~~i~~i~~~~~--~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~------ipiia 124 (202)
.+.++.+++..+ +++++ ++.+.++++.+.++|+|+|.+++.+ .+.+.++++.++.+ +||.+
T Consensus 186 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~~~v~I~A 254 (294)
T 3c2e_A 186 TNAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGKKHFLLEC 254 (294)
T ss_dssp HHHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC-------------------------------CCEEEE
T ss_pred HHHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCCCCeEEEE
Confidence 346777777664 56776 6667789999999999999987631 23344444444333 99999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEcHHH
Q psy16780 125 DGGVRYGTDVFKALALGAKMVFVGRPA 151 (202)
Q Consensus 125 ~GGI~~~~D~~kal~~GAd~V~ig~~~ 151 (202)
+||| +.+.+.+...+|+|.+.+|+..
T Consensus 255 SGGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 255 SGGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp ECCC-CC------CCCSCSEEECGGGT
T ss_pred ECCC-CHHHHHHHHHcCCCEEEEechh
Confidence 9999 9999999999999999999864
No 158
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.84 E-value=0.0002 Score=61.35 Aligned_cols=85 Identities=19% Similarity=0.268 Sum_probs=68.2
Q ss_pred HHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 54 SDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 54 ~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
+.+++.++.. ..|+.| ++-+.++++.++++|+|.|.+++. +.+.++++++.+++++++.+||||. .+
T Consensus 220 ~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaSGGIt-~~ 287 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENSGNIT-LD 287 (320)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-HH
T ss_pred HHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCCC-HH
Confidence 4667777665 356766 678899999999999999999773 3456677666676789999999984 78
Q ss_pred HHHHHHHhCCCEEEEcHH
Q psy16780 133 DVFKALALGAKMVFVGRP 150 (202)
Q Consensus 133 D~~kal~~GAd~V~ig~~ 150 (202)
.+.+..+.|+|.+.+|+.
T Consensus 288 ~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 288 NLKECAETGVDYISVGAL 305 (320)
T ss_dssp HHHHHHTTTCSEEECTHH
T ss_pred HHHHHHHcCCCEEEECce
Confidence 888888899999999984
No 159
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.84 E-value=9.3e-05 Score=62.85 Aligned_cols=85 Identities=13% Similarity=0.283 Sum_probs=65.7
Q ss_pred HHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 54 SDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 54 ~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
+.+++.++.. ..|+.| ++-+.++++.+.++|+|.|.++|. +.+.++++.+.+.+++++.+|||| +.+
T Consensus 198 ~Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaSGGI-~~~ 265 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVSGGV-NFD 265 (298)
T ss_dssp HHHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEESSC-STT
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCC-CHH
Confidence 4566777664 355555 467889999999999999999873 335566655556678999999998 667
Q ss_pred HHHHHHHhCCCEEEEcHH
Q psy16780 133 DVFKALALGAKMVFVGRP 150 (202)
Q Consensus 133 D~~kal~~GAd~V~ig~~ 150 (202)
.+.+....|+|.+.+|+.
T Consensus 266 ~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 266 TVRAIAETGVDRISIGAL 283 (298)
T ss_dssp THHHHHHTTCSEEECGGG
T ss_pred HHHHHHHcCCCEEEECCe
Confidence 888888899999999984
No 160
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.81 E-value=0.0001 Score=60.37 Aligned_cols=119 Identities=16% Similarity=0.161 Sum_probs=78.2
Q ss_pred ccHHHHHHHHHhcCCCEEEEec-cCHH-HHHHHHHcCCcEEEeeccC-c------------------------CC-----
Q psy16780 51 INWSDVTWLKTITKLPIVLKGI-LTAE-DAKIGVEMGASAIMVSNHG-G------------------------RQ----- 98 (202)
Q Consensus 51 ~~~~~i~~i~~~~~~Pv~vK~~-~~~~-~a~~l~~aG~d~I~v~~~g-g------------------------~~----- 98 (202)
+-...++++|+.++.|+-+=+- .+++ .++.+.++|+|+|+++.-. . |.
T Consensus 44 ~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~ 123 (231)
T 3ctl_A 44 LSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMK 123 (231)
T ss_dssp BCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGT
T ss_pred hcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHH
Confidence 3477999999988888776642 4443 4788899999999875321 1 00
Q ss_pred -----C-----------CCc----cchHHHHHHHHHHh---CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc-HHHHHH
Q psy16780 99 -----L-----------DYV----PASIEALPEIAKAV---GHKVDVYLDGGVRYGTDVFKALALGAKMVFVG-RPALWG 154 (202)
Q Consensus 99 -----~-----------~~~----~~~~~~l~~i~~~~---~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig-~~~l~~ 154 (202)
. .++ +...+-++++++.. +.+++|.++|||. .+.+.++..+|||.+.+| |+++.+
T Consensus 124 ~~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~ 202 (231)
T 3ctl_A 124 YYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNH 202 (231)
T ss_dssp TTGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGG
T ss_pred HHHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCC
Confidence 0 011 22344455555443 2268999999997 577889999999999999 887632
Q ss_pred hhhcChHHHHHHHHHHHHHHH
Q psy16780 155 LAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 155 ~~~~G~~~v~~~i~~l~~~L~ 175 (202)
.. ...+.++.+++.++
T Consensus 203 ---~d--~~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 203 ---AE--NIDEAWRIMTAQIL 218 (231)
T ss_dssp ---CS--SHHHHHHHHHHHHH
T ss_pred ---CC--cHHHHHHHHHHHHH
Confidence 12 03345556655444
No 161
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.81 E-value=0.00013 Score=61.61 Aligned_cols=88 Identities=20% Similarity=0.152 Sum_probs=61.0
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEec-----c-CHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGI-----L-TAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~-----~-~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
++-+.+.+.|+++++.++ +..+|.+ + +.+. ++.+.++|+|+|.-|.+-+ .+..+.+.+.-+++.+
T Consensus 132 g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~----~~gAT~edV~lM~~~v 206 (297)
T 4eiv_A 132 DGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLG----ATHATMFTVHLISIAL 206 (297)
T ss_dssp HHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCC----CCCCCHHHHHHHHHHH
Confidence 667777888999998884 6678976 2 3342 3557899999999876422 1223444333333332
Q ss_pred ----------------------CCCcEEEEe-cCCCCHHHHHHHHH
Q psy16780 117 ----------------------GHKVDVYLD-GGVRYGTDVFKALA 139 (202)
Q Consensus 117 ----------------------~~~ipiia~-GGI~~~~D~~kal~ 139 (202)
+.++.|=++ |||||.+|+.+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 207 REYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQ 252 (297)
T ss_dssp HHHHCC------------------CCEEEEECTTCCHHHHHHHHHH
T ss_pred HHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHH
Confidence 457999999 99999999999999
No 162
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.80 E-value=6.1e-05 Score=61.49 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=66.0
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccc-hHHHHHHHHHHhCCCcEEEEecCCCCH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPA-SIEALPEIAKAVGHKVDVYLDGGVRYG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~~ipiia~GGI~~~ 131 (202)
.+.++ .++..++|++.. +.|++++..+.+.|+|+|.+ +.. ... ..+.+..++..+ +++|+++.||| +.
T Consensus 109 ~~v~~-~~~~~g~~~i~G-~~t~~e~~~A~~~Gad~vk~--FPa-----~~~~G~~~lk~i~~~~-~~ipvvaiGGI-~~ 177 (225)
T 1mxs_A 109 EDILE-AGVDSEIPLLPG-ISTPSEIMMGYALGYRRFKL--FPA-----EISGGVAAIKAFGGPF-GDIRFCPTGGV-NP 177 (225)
T ss_dssp HHHHH-HHHHCSSCEECE-ECSHHHHHHHHTTTCCEEEE--TTH-----HHHTHHHHHHHHHTTT-TTCEEEEBSSC-CT
T ss_pred HHHHH-HHHHhCCCEEEe-eCCHHHHHHHHHCCCCEEEE--ccC-----ccccCHHHHHHHHhhC-CCCeEEEECCC-CH
Confidence 33444 444578898875 88999999999999999998 321 011 245566665544 37999999999 56
Q ss_pred HHHHHHHH-hCCCEEEEcHHHHH
Q psy16780 132 TDVFKALA-LGAKMVFVGRPALW 153 (202)
Q Consensus 132 ~D~~kal~-~GAd~V~ig~~~l~ 153 (202)
+.+.+.++ .||++|. ||.+..
T Consensus 178 ~N~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 178 ANVRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp TTHHHHHHSTTBCCEE-ECTTSC
T ss_pred HHHHHHHhccCCEEEE-EchhcC
Confidence 78999999 6999999 887764
No 163
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.79 E-value=5.2e-05 Score=61.63 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=62.2
Q ss_pred cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 73 LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 73 ~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
.+.+.++.+.+.|++.+++.-....+.++...+...+..+++..+.+.+|..+||| +++++.++..+|||.+.+||++.
T Consensus 122 ~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~ 200 (221)
T 3exr_A 122 WTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGIT 200 (221)
T ss_dssp CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHH
T ss_pred CCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHCCCCEEEECchhh
Confidence 35777888888999988874321111222222333445555544347899999999 55677788889999999999977
Q ss_pred HHhhhcChHHHHHHHHHHHHHHHH
Q psy16780 153 WGLAHSGKSGVRKVLDILINEFDQ 176 (202)
Q Consensus 153 ~~~~~~G~~~v~~~i~~l~~~L~~ 176 (202)
.+ ..+ .+.++.++++++.
T Consensus 201 ~a---~dp---~~a~~~~~~~~~~ 218 (221)
T 3exr_A 201 EA---KNP---AGAARAFKDEIKR 218 (221)
T ss_dssp TS---SSH---HHHHHHHHHHHHH
T ss_pred CC---CCH---HHHHHHHHHHHHH
Confidence 42 222 2445566665553
No 164
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.76 E-value=0.00079 Score=54.94 Aligned_cols=114 Identities=11% Similarity=0.125 Sum_probs=75.7
Q ss_pred HHHHH---HHHHhcCCCEEEEec--cCHHHHHHHHHcC-CcEEEeec-cCcC-CCCCccchHHHHHHHHHHhCCCcEEEE
Q psy16780 53 WSDVT---WLKTITKLPIVLKGI--LTAEDAKIGVEMG-ASAIMVSN-HGGR-QLDYVPASIEALPEIAKAVGHKVDVYL 124 (202)
Q Consensus 53 ~~~i~---~i~~~~~~Pv~vK~~--~~~~~a~~l~~aG-~d~I~v~~-~gg~-~~~~~~~~~~~l~~i~~~~~~~ipiia 124 (202)
.+.++ .+++. +..+.+-+. ...+.++.+.+.| +|.|.+-+ +.|. +....+...+-++++++..+ +++|.+
T Consensus 101 ~~~i~~~~~i~~~-G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~-~~~I~V 178 (227)
T 1tqx_A 101 ERCIQLAKEIRDN-NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK-NLNIQV 178 (227)
T ss_dssp HHHHHHHHHHHTT-TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TCEEEE
T ss_pred HHHHHHHHHHHHc-CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc-CCeEEE
Confidence 34677 77753 555555432 2346677788876 99996543 3222 12234556677788777654 799999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 125 DGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 125 ~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
+|||. .+.+.++.++|||.+.+||+++.+ .. ..+.++.+++.++
T Consensus 179 dGGI~-~~ti~~~~~aGAd~~V~GsaIf~~---~d---~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 179 DGGLN-IETTEISASHGANIIVAGTSIFNA---ED---PKYVIDTMRVSVQ 222 (227)
T ss_dssp ESSCC-HHHHHHHHHHTCCEEEESHHHHTC---SS---HHHHHHHHHHHHH
T ss_pred ECCCC-HHHHHHHHHcCCCEEEEeHHHhCC---CC---HHHHHHHHHHHHH
Confidence 99997 679999999999999999998741 12 3345556655443
No 165
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.75 E-value=4.6e-05 Score=64.42 Aligned_cols=87 Identities=24% Similarity=0.236 Sum_probs=65.9
Q ss_pred HHHHHHHHHhcC--CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhC---CCcEEEEecC
Q psy16780 53 WSDVTWLKTITK--LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVG---HKVDVYLDGG 127 (202)
Q Consensus 53 ~~~i~~i~~~~~--~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipiia~GG 127 (202)
.+.++..|+..+ .++.| .+.+.++++.+.++|+|+|.+++. +.+.+.++++.++ .++|+.++||
T Consensus 180 ~~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn~----------~~e~l~~av~~l~~~~~~v~ieASGG 248 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDNL----------SPEEVKDISRRIKDINPNVIVEVSGG 248 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred HHHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCceEEEECC
Confidence 346777777653 57777 677899999999999999999873 2334444444332 3799999999
Q ss_pred CCCHHHHHHHHHhCCCEEEEcHHH
Q psy16780 128 VRYGTDVFKALALGAKMVFVGRPA 151 (202)
Q Consensus 128 I~~~~D~~kal~~GAd~V~ig~~~ 151 (202)
| +.+.+.+..+.|+|.+.+|+..
T Consensus 249 I-t~eni~~~a~tGVD~IsvGslt 271 (285)
T 1o4u_A 249 I-TEENVSLYDFETVDVISSSRLT 271 (285)
T ss_dssp C-CTTTGGGGCCTTCCEEEEGGGT
T ss_pred C-CHHHHHHHHHcCCCEEEEeHHH
Confidence 9 5688888888999999999854
No 166
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.75 E-value=0.00011 Score=60.42 Aligned_cols=73 Identities=21% Similarity=0.248 Sum_probs=58.3
Q ss_pred CHHHHHHHHHcCC-----cEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 74 TAEDAKIGVEMGA-----SAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 74 ~~~~a~~l~~aG~-----d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+++.++...++|. ..|.+.. .|+ ....+.+.++++.. .++|++.-|||++++++.+++. |||.|.+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~-~G~-----~~~~~~i~~i~~~~-~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY-SGT-----YGNPELVAEVKKVL-DKARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC-TTS-----CCCHHHHHHHHHHC-SSSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC-CCC-----cchHHHHHHHHHhC-CCCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 5677877777776 7777765 332 44667788887764 2699999999999999999988 99999999
Q ss_pred HHHHHH
Q psy16780 149 RPALWG 154 (202)
Q Consensus 149 ~~~l~~ 154 (202)
|++...
T Consensus 219 Sa~v~~ 224 (234)
T 2f6u_A 219 NVIYEK 224 (234)
T ss_dssp HHHHHH
T ss_pred hHHHhC
Confidence 999863
No 167
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.73 E-value=0.00018 Score=58.34 Aligned_cols=89 Identities=22% Similarity=0.279 Sum_probs=56.7
Q ss_pred CCCEEEEeccCHHHHHHHHHcCCcEEEeeccC--cCC---CCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHH
Q psy16780 64 KLPIVLKGILTAEDAKIGVEMGASAIMVSNHG--GRQ---LDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKAL 138 (202)
Q Consensus 64 ~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g--g~~---~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal 138 (202)
++.+++ .+.+.+..+++.+.|.+.|-+.+.. ||. ....+.......+..+.+..++||++-|||++++++..+.
T Consensus 111 Gl~~iv-~v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~ 189 (219)
T 2h6r_A 111 GLETIV-CTNNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAAL 189 (219)
T ss_dssp TCEEEE-EESSSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHH
T ss_pred CCeEEE-EeCCchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHh
Confidence 665555 3344445677777888877665432 222 1111111233333333344479999999999999999999
Q ss_pred HhCCCEEEEcHHHHH
Q psy16780 139 ALGAKMVFVGRPALW 153 (202)
Q Consensus 139 ~~GAd~V~ig~~~l~ 153 (202)
..|||+|.+|++++.
T Consensus 190 ~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 190 DLGAEGVLLASGVVK 204 (219)
T ss_dssp TTTCCCEEESHHHHT
T ss_pred hCCCCEEEEcHHHhC
Confidence 999999999999986
No 168
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.70 E-value=0.00025 Score=61.69 Aligned_cols=94 Identities=26% Similarity=0.260 Sum_probs=71.1
Q ss_pred CccccHHHHHHHHHhcCCCEEEEecc-CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEec
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGIL-TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~-~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~G 126 (202)
+++...+.++++++..+.|+.+-... +.+.++.+.++|+|.|++....|. .....+.+.++++.+ ++||++ |
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~----~~~~~~~i~~i~~~~--~~~Viv-g 151 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-G 151 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCS----BHHHHHHHHHHHHHC--CCEEEE-E
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCC----cHHHHHHHHHHHHhc--CCcEEE-c
Confidence 45555678888888778898887653 478899999999999998543221 011234567777766 789987 6
Q ss_pred CCCCHHHHHHHHHhCCCEEEEc
Q psy16780 127 GVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig 148 (202)
++.+.+++.++..+|||+|.+|
T Consensus 152 ~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 152 NVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp EECSHHHHHHHHHTTCSEEEEC
T ss_pred cCCCHHHHHHHHHcCcCEEEEe
Confidence 7899999999999999999985
No 169
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.67 E-value=0.00035 Score=56.11 Aligned_cols=111 Identities=11% Similarity=0.084 Sum_probs=68.8
Q ss_pred HHHHHHHHhcCCCEEEEec--cCHHHHHHHHHcCCcEEEeeccC---cCCCCCccchHHHHHHHHHHhCCCcEEEEecCC
Q psy16780 54 SDVTWLKTITKLPIVLKGI--LTAEDAKIGVEMGASAIMVSNHG---GRQLDYVPASIEALPEIAKAVGHKVDVYLDGGV 128 (202)
Q Consensus 54 ~~i~~i~~~~~~Pv~vK~~--~~~~~a~~l~~aG~d~I~v~~~g---g~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI 128 (202)
..++.+++ .+.++.+++. .+...++.+.+.|.+.+++.-.. ....++ ..+.+..+++..+.++||++.|||
T Consensus 97 ~~~~~~~~-~g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~~~~~G~~g---~~~~i~~lr~~~~~~~~i~v~GGI 172 (216)
T 1q6o_A 97 GALDVAKE-FNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAW---GEADITAIKRLSDMGFKVTVTGGL 172 (216)
T ss_dssp HHHHHHHH-TTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHTTCCC---CHHHHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHHHH-cCCCceeeeeeCCChhhHHHHHhcCcHHHHHHHHHHHHhcCCCC---CHHHHHHHHHhcCCCCcEEEECCc
Confidence 34555554 4677665543 23556677777788777662210 001111 244455555555447899999999
Q ss_pred CCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 129 RYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 129 ~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
+ ++.+.+++.+|||.+.+||+++.+ ..+ .+.++.+++.++
T Consensus 173 ~-~~~~~~~~~aGad~ivvG~~I~~a---~dp---~~~~~~~~~~i~ 212 (216)
T 1q6o_A 173 A-LEDLPLFKGIPIHVFIAGRSIRDA---ASP---VEAARQFKRSIA 212 (216)
T ss_dssp C-GGGGGGGTTSCCSEEEESHHHHTS---SCH---HHHHHHHHHHHH
T ss_pred C-hhhHHHHHHcCCCEEEEeehhcCC---CCH---HHHHHHHHHHHH
Confidence 8 778888999999999999998742 222 344455555544
No 170
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.66 E-value=0.00051 Score=62.82 Aligned_cols=80 Identities=15% Similarity=0.045 Sum_probs=59.0
Q ss_pred cCHHHHHHHHHcC---CcEEEeeccCcCCC--CC--ccchHHHHHHHHHHh----CCCcEEEEecCCCCHHHHHHHHH--
Q psy16780 73 LTAEDAKIGVEMG---ASAIMVSNHGGRQL--DY--VPASIEALPEIAKAV----GHKVDVYLDGGVRYGTDVFKALA-- 139 (202)
Q Consensus 73 ~~~~~a~~l~~aG---~d~I~v~~~gg~~~--~~--~~~~~~~l~~i~~~~----~~~ipiia~GGI~~~~D~~kal~-- 139 (202)
.++++++.+.+.| +|+|-++.-..+.- +. .+..++.++++++.+ ..++|+++-||| +.+++.+.+.
T Consensus 116 ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~ 194 (540)
T 3nl6_A 116 GFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQC 194 (540)
T ss_dssp CSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhh
Confidence 6789999999999 99999854221211 11 122456666666553 137999999999 7899999997
Q ss_pred ------hCCCEEEEcHHHHH
Q psy16780 140 ------LGAKMVFVGRPALW 153 (202)
Q Consensus 140 ------~GAd~V~ig~~~l~ 153 (202)
.||++|.++|+++.
T Consensus 195 ~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 195 VSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp BCTTSSCBCSCEEESHHHHT
T ss_pred cccccccCceEEEEeHHHhc
Confidence 79999999999874
No 171
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.66 E-value=0.00015 Score=59.74 Aligned_cols=71 Identities=14% Similarity=0.237 Sum_probs=55.7
Q ss_pred HHHHHHHHHcCC----cEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 75 AEDAKIGVEMGA----SAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 75 ~~~a~~l~~aG~----d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
++.++...++|. ..|.+.+ .|+ ....+.+.++++.. .++|++.-|||++++++.+++. |||.|.+||+
T Consensus 141 ~~~~~~~a~~g~~~~~~~VYl~s-~G~-----~~~~~~i~~i~~~~-~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa 212 (240)
T 1viz_A 141 MDDIVAYARVSELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVL-ETSTLFYGGGIKDAETAKQYAE-HADVIVVGNA 212 (240)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHTC-SSSEEEEESSCCSHHHHHHHHT-TCSEEEECTH
T ss_pred HHHHHHHHHhCcccCCCEEEEeC-CCc-----cChHHHHHHHHHhc-CCCCEEEEeccCCHHHHHHHHh-CCCEEEEChH
Confidence 567777776664 6676655 333 34667788887653 2689999999999999999888 9999999999
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+..
T Consensus 213 ~v~ 215 (240)
T 1viz_A 213 VYE 215 (240)
T ss_dssp HHH
T ss_pred HHh
Confidence 986
No 172
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.59 E-value=0.00014 Score=59.11 Aligned_cols=94 Identities=15% Similarity=0.125 Sum_probs=70.6
Q ss_pred ccccHHHHHHHHHhcCC------CEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 49 ETINWSDVTWLKTITKL------PIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~------Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
|.+..++++..++. ++ |++- ++.|++++..+.++|+|.|.+.-. .. .+ ....++.++..+ +++|+
T Consensus 92 P~~~~evi~~~~~~-~v~~~~~~~~~P-G~~TptE~~~A~~~Gad~vK~FPa--~~-~g---G~~~lkal~~p~-p~i~~ 162 (217)
T 3lab_A 92 PGLTPELIEKAKQV-KLDGQWQGVFLP-GVATASEVMIAAQAGITQLKCFPA--SA-IG---GAKLLKAWSGPF-PDIQF 162 (217)
T ss_dssp SSCCHHHHHHHHHH-HHHCSCCCEEEE-EECSHHHHHHHHHTTCCEEEETTT--TT-TT---HHHHHHHHHTTC-TTCEE
T ss_pred CCCcHHHHHHHHHc-CCCccCCCeEeC-CCCCHHHHHHHHHcCCCEEEECcc--cc-cc---CHHHHHHHHhhh-cCceE
Confidence 45566677776653 56 8876 679999999999999999988432 11 01 245667766555 47999
Q ss_pred EEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 123 YLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
+++|||. .+.+.+.+++|+.++..|+.+.
T Consensus 163 ~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 163 CPTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp EEBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred EEeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 9999998 7999999999998887776554
No 173
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=97.58 E-value=0.00054 Score=55.92 Aligned_cols=101 Identities=23% Similarity=0.285 Sum_probs=73.2
Q ss_pred cHHHHHHHHHhcCCCEEEEeccCHHH---------HHHHHHcCCcEEEeeccCcCC----------------C-------
Q psy16780 52 NWSDVTWLKTITKLPIVLKGILTAED---------AKIGVEMGASAIMVSNHGGRQ----------------L------- 99 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~~~~~---------a~~l~~aG~d~I~v~~~gg~~----------------~------- 99 (202)
....+..+++.+++||..|.+ ++.+ +..+.+.|+|+|.+.-.-.|. +
T Consensus 47 ~~~~L~~v~~~~~i~v~aQdv-~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 125 (225)
T 1hg3_A 47 QLVDLRMIAESVEIPVFAQHI-DPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN 125 (225)
T ss_dssp CHHHHHHHHHSCSSCBEESCC-CSCCSBSCTTCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES
T ss_pred CHHHHHHHHHhcCCceeeeeC-CcccCCCccCcccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 577889999888999999874 3444 788889999999885322111 0
Q ss_pred -----------------------C-Cc----cchHHHHHHH---HHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 100 -----------------------D-YV----PASIEALPEI---AKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 100 -----------------------~-~~----~~~~~~l~~i---~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
. .+ ..+.+.+.+. .+.+..+++++.-|||.+..|+..+...|+|++.+|
T Consensus 126 e~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG 205 (225)
T 1hg3_A 126 NPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLA 205 (225)
T ss_dssp SHHHHHHHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeC
Confidence 0 12 2233323332 233445799999999999999999999999999999
Q ss_pred HHHHH
Q psy16780 149 RPALW 153 (202)
Q Consensus 149 ~~~l~ 153 (202)
++++.
T Consensus 206 ~a~l~ 210 (225)
T 1hg3_A 206 SGVTK 210 (225)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 99986
No 174
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.58 E-value=4.7e-05 Score=60.76 Aligned_cols=45 Identities=22% Similarity=0.384 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 107 EALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 107 ~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
..+.++++.+ ++|||+.|+|++.+|+.+++.+||++|..++..+|
T Consensus 140 ~iI~~i~~~~--~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW 184 (192)
T 3kts_A 140 EQVQKMTQKL--HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW 184 (192)
T ss_dssp HHHHHHHHHH--CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGG
T ss_pred HHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHh
Confidence 5778888877 89999999999999999999999999999998887
No 175
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.55 E-value=0.00028 Score=59.51 Aligned_cols=86 Identities=13% Similarity=0.122 Sum_probs=64.2
Q ss_pred HHHHHHHHhcC-CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhC---CCcEEEEecCCC
Q psy16780 54 SDVTWLKTITK-LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVG---HKVDVYLDGGVR 129 (202)
Q Consensus 54 ~~i~~i~~~~~-~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipiia~GGI~ 129 (202)
+.+++.|+..+ .|+.| .+.+.++++.+.++|+|.|.+++. +.+.+.++.+.++ .++++.+||||
T Consensus 183 ~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn~----------~~~~~~~~v~~l~~~~~~v~ieaSGGI- 250 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDNF----------AVWQTQTAVQRRDSRAPTVMLESSGGL- 250 (284)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEETC----------CHHHHHHHHHHHHHHCTTCEEEEESSC-
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCeEEEEECCC-
Confidence 46777777652 36766 677899999999999999999773 2233333333322 37999999998
Q ss_pred CHHHHHHHHHhCCCEEEEcHHH
Q psy16780 130 YGTDVFKALALGAKMVFVGRPA 151 (202)
Q Consensus 130 ~~~D~~kal~~GAd~V~ig~~~ 151 (202)
+.+.+.+....|+|.+.+|+..
T Consensus 251 t~~~i~~~a~tGVD~isvG~l~ 272 (284)
T 1qpo_A 251 SLQTAATYAETGVDYLAVGALT 272 (284)
T ss_dssp CTTTHHHHHHTTCSEEECGGGT
T ss_pred CHHHHHHHHhcCCCEEEECHHH
Confidence 6788999999999999999843
No 176
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.55 E-value=3.7e-05 Score=81.99 Aligned_cols=89 Identities=15% Similarity=0.175 Sum_probs=61.5
Q ss_pred CCCEEEEeccCHHHHHHHHHcCCc------EEEeecc--CcCCCCCccchHHHHHHHHHHhC--CCcEEEEecCCCCHHH
Q psy16780 64 KLPIVLKGILTAEDAKIGVEMGAS------AIMVSNH--GGRQLDYVPASIEALPEIAKAVG--HKVDVYLDGGVRYGTD 133 (202)
Q Consensus 64 ~~Pv~vK~~~~~~~a~~l~~aG~d------~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~--~~ipiia~GGI~~~~D 133 (202)
+++++.=.+.+.+.++++.+.|+| +|++.|. ||... .......+......++ .++|||+.|||.++++
T Consensus 543 Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g--~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~ 620 (3089)
T 3zen_D 543 GISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHS--WEDLDDLLLATYSELRSRSNITICVGGGIGTPER 620 (3089)
T ss_dssp HHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSEECC--SCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTT
T ss_pred CCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCC--cccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHH
Confidence 444443124677888889999998 7877663 33221 1122334423323221 2799999999999999
Q ss_pred HHHHH-----------HhCCCEEEEcHHHHHH
Q psy16780 134 VFKAL-----------ALGAKMVFVGRPALWG 154 (202)
Q Consensus 134 ~~kal-----------~~GAd~V~ig~~~l~~ 154 (202)
+..++ ++|||+|+|||.|+..
T Consensus 621 vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t 652 (3089)
T 3zen_D 621 SAEYLSGRWAEVHGYPLMPIDGILVGTAAMAT 652 (3089)
T ss_dssp THHHHHTGGGGTTTCCCCCCSEEECSSTTTTC
T ss_pred HHHHhccccccccCccCCCCCEEEecHHHHhC
Confidence 99999 9999999999999864
No 177
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=97.54 E-value=0.00071 Score=55.26 Aligned_cols=101 Identities=23% Similarity=0.262 Sum_probs=71.9
Q ss_pred cHHHHHHHHHhcCCCEEEEeccCHHH---------HHHHHHcCCcEEEeeccCcCC----------------C-------
Q psy16780 52 NWSDVTWLKTITKLPIVLKGILTAED---------AKIGVEMGASAIMVSNHGGRQ----------------L------- 99 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~~~~~---------a~~l~~aG~d~I~v~~~gg~~----------------~------- 99 (202)
....+..+++.+++||..|.+ ++.+ +..+.+.|+|+|.+.-.-.|. +
T Consensus 44 ~~~~L~~v~~~~~i~v~aQdv-~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 122 (226)
T 1w0m_A 44 NHLELGLVSQSVDIPVYAQGA-DVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAP 122 (226)
T ss_dssp CGGGHHHHHTTCSSCBEESCC-SBSSCSSCTTCCBHHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHHHHHHHHHhcCCceEeeEC-ChhhCCCccCCCCHHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 355788888888999999874 3444 778888999999885432111 0
Q ss_pred -----------------------C-Cc----cchHHHHHHH---HHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 100 -----------------------D-YV----PASIEALPEI---AKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 100 -----------------------~-~~----~~~~~~l~~i---~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
. .+ ..+.+.+.+. .+.+..+++++.-|||.+..|+..+...|+|++.+|
T Consensus 123 e~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG 202 (226)
T 1w0m_A 123 DPRTSLAAAALGPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLA 202 (226)
T ss_dssp SHHHHHHHHHTCCSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHhcCCCCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEEC
Confidence 0 11 2223323332 223445799999999999999999999999999999
Q ss_pred HHHHH
Q psy16780 149 RPALW 153 (202)
Q Consensus 149 ~~~l~ 153 (202)
++++.
T Consensus 203 ~a~l~ 207 (226)
T 1w0m_A 203 SAAVK 207 (226)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 99996
No 178
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=97.53 E-value=0.00014 Score=64.00 Aligned_cols=102 Identities=11% Similarity=-0.103 Sum_probs=61.6
Q ss_pred cccHHHHHHHHHhc-CCCEEEEeccC--------------H----HHHHHHHHcC-----CcEEEeeccCcCC--CCCcc
Q psy16780 50 TINWSDVTWLKTIT-KLPIVLKGILT--------------A----EDAKIGVEMG-----ASAIMVSNHGGRQ--LDYVP 103 (202)
Q Consensus 50 ~~~~~~i~~i~~~~-~~Pv~vK~~~~--------------~----~~a~~l~~aG-----~d~I~v~~~gg~~--~~~~~ 103 (202)
.|..|+|++||+.+ +-||.+|++.. . +.+..+...+ .+.+.+....... .....
T Consensus 223 Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (400)
T 4gbu_A 223 RFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGE 302 (400)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTT
T ss_pred HHHHHHHHHHHHHcCCCcEEEEeccccccCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCccccccc
Confidence 35788999999987 35999998610 1 1223333322 2334433211100 00000
Q ss_pred --chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHh-CCCEEEEcHHHHH
Q psy16780 104 --ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALAL-GAKMVFVGRPALW 153 (202)
Q Consensus 104 --~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~-GAd~V~ig~~~l~ 153 (202)
........+++.+ ++|||++||+.+..++.+.+.. +||+|.+||+|+.
T Consensus 303 ~~~~~~~~~~ir~~~--~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia 353 (400)
T 4gbu_A 303 GEYEGGSNDFVYSIW--KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFIS 353 (400)
T ss_dssp TCCCSCCSTHHHHHC--CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHH
T ss_pred chhhhHHHHHHHHHh--CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHH
Confidence 0001112345555 7999999999998888888876 5999999999996
No 179
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.53 E-value=0.00029 Score=57.93 Aligned_cols=75 Identities=25% Similarity=0.337 Sum_probs=59.5
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
.+.|+...+.|+|.+++-.-.+. .++.....+.+.++++.. .+|+...||||+.+|+.+.+.+||+-|.++|..+
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~ 108 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI 108 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT
T ss_pred HHHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHHcCCCEEEEccccc
Confidence 47789999999999887531110 112345677888888776 7999999999999999999999999999999654
No 180
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.50 E-value=0.00052 Score=54.78 Aligned_cols=80 Identities=18% Similarity=0.236 Sum_probs=55.0
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHHhCCCEEEEcHHHHHHhh
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY-GTDVFKALALGAKMVFVGRPALWGLA 156 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~-~~D~~kal~~GAd~V~ig~~~l~~~~ 156 (202)
++.+.+.|++++.++.+ ..+.+.++++..+. -+++.+|||+. +.++.+++++|||.+.+||+++.+
T Consensus 125 ~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~~-~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a-- 191 (208)
T 2czd_A 125 IEVANEIEPFGVIAPGT----------RPERIGYIRDRLKE-GIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA-- 191 (208)
T ss_dssp HHHHHHHCCSEEECCCS----------STHHHHHHHHHSCT-TCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS--
T ss_pred HHHHHHhCCcEEEECCC----------ChHHHHHHHHhCCC-CeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC--
Confidence 55677889888877542 23445566665533 34679999986 558999999999999999998852
Q ss_pred hcChHHHHHHHHHHHHHH
Q psy16780 157 HSGKSGVRKVLDILINEF 174 (202)
Q Consensus 157 ~~G~~~v~~~i~~l~~~L 174 (202)
.+ ..+.++.+++++
T Consensus 192 -~d---p~~~~~~l~~~i 205 (208)
T 2czd_A 192 -PN---PREAAKAIYDEI 205 (208)
T ss_dssp -SS---HHHHHHHHHHHH
T ss_pred -CC---HHHHHHHHHHHH
Confidence 22 334555555544
No 181
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.45 E-value=0.00061 Score=55.86 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=61.2
Q ss_pred cHHHHHHHHHhcCCC-EEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 52 NWSDVTWLKTITKLP-IVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 52 ~~~~i~~i~~~~~~P-v~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
..+.|+++++.++-. +....+.+.++++.+.++|+|+|+.-+ .+.+.+..+++ . .+|++. |+.|
T Consensus 72 a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~----------~~~~vi~~~~~-~--gi~~ip--Gv~T 136 (232)
T 4e38_A 72 AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG----------FNPNTVRACQE-I--GIDIVP--GVNN 136 (232)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHH-H--TCEEEC--EECS
T ss_pred HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC----------CCHHHHHHHHH-c--CCCEEc--CCCC
Confidence 467899999987443 334446899999999999999996421 13344444433 3 688887 6899
Q ss_pred HHHHHHHHHhCCCEEEE
Q psy16780 131 GTDVFKALALGAKMVFV 147 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~i 147 (202)
+.++.+|+++|||.|.+
T Consensus 137 ptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 137 PSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999987
No 182
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=97.43 E-value=0.00087 Score=58.47 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=68.1
Q ss_pred CccccHHHHHHHHHhcCCCEEEEec---cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEE
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGI---LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYL 124 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~---~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia 124 (202)
+++...+.++++|+.-++++.+-.. ...+.++.+.++|+|.|++....|.. ....+.+.++++.+ +++||++
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~----~~~~~~I~~ik~~~-p~v~Vi~ 154 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHS----EGVLQRIRETRAAY-PHLEIIG 154 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTS----HHHHHHHHHHHHHC-TTCEEEE
T ss_pred CHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCC----HHHHHHHHHHHHhc-CCCceEe
Confidence 4555566788888754555555432 34788999999999999986543321 12334567777665 3688877
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 125 DGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 125 ~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
|.+.+.+++.++..+|||+|.+|
T Consensus 155 -G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 155 -GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp -EEECSHHHHHHHHHHTCSEEEEC
T ss_pred -eeeCCHHHHHHHHHcCCCEEEEe
Confidence 66899999999999999999994
No 183
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=97.39 E-value=0.0043 Score=50.45 Aligned_cols=116 Identities=17% Similarity=0.197 Sum_probs=74.9
Q ss_pred cHHHHHHHHHh--cCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHH---HHhCCCcEEEEec
Q psy16780 52 NWSDVTWLKTI--TKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIA---KAVGHKVDVYLDG 126 (202)
Q Consensus 52 ~~~~i~~i~~~--~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~---~~~~~~ipiia~G 126 (202)
+++=++.++.. -++++-+=.+++..++..+.++|+++|.. .-||-.+.+.+....+.++. +..+.+..|++.
T Consensus 90 T~eGl~A~~~L~~~GI~vn~TlifS~~QA~~Aa~AGa~yISP--fvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~IlaA- 166 (223)
T 3s1x_A 90 TEDGLRAIKTLSSEHINTNCTLVFNPIQALLAAKAGVTYVSP--FVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVA- 166 (223)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEE--BSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEEB-
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCeEEEe--ecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEEE-
Confidence 35544444432 27777777778899999999999998865 33443333333444444443 333335666664
Q ss_pred CCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcC--hHHHHHHHHHH
Q psy16780 127 GVRYGTDVFKALALGAKMVFVGRPALWGLAHSG--KSGVRKVLDIL 170 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G--~~~v~~~i~~l 170 (202)
.+|+..++.++..+|||.+-+.-.++..+.... ..++++|.+.|
T Consensus 167 S~Rn~~~v~~aa~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~Dw 212 (223)
T 3s1x_A 167 SIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDW 212 (223)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHcCCCEEEeCHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 599999999999999999999988887643221 14444444444
No 184
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.38 E-value=0.00088 Score=54.38 Aligned_cols=82 Identities=20% Similarity=0.224 Sum_probs=62.5
Q ss_pred ccHHHHHHHHHhcCCCE-EEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc------EEE
Q psy16780 51 INWSDVTWLKTITKLPI-VLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV------DVY 123 (202)
Q Consensus 51 ~~~~~i~~i~~~~~~Pv-~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i------pii 123 (202)
...+.|+++++.++.++ ....+.+.++++.+.++|+++|+.-+ .+.+.+..+++ . .+ |++
T Consensus 50 ~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~----------~~~evi~~~~~-~--~v~~~~~~~~~ 116 (217)
T 3lab_A 50 AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG----------LTPELIEKAKQ-V--KLDGQWQGVFL 116 (217)
T ss_dssp THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS----------CCHHHHHHHHH-H--HHHCSCCCEEE
T ss_pred cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC----------CcHHHHHHHHH-c--CCCccCCCeEe
Confidence 45679999999885554 34456899999999999999996522 13344444433 2 56 888
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 124 LDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 124 a~GGI~~~~D~~kal~~GAd~V~i 147 (202)
. |+.|+.++.+++.+|+|.|-+
T Consensus 117 P--G~~TptE~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 117 P--GVATASEVMIAAQAGITQLKC 138 (217)
T ss_dssp E--EECSHHHHHHHHHTTCCEEEE
T ss_pred C--CCCCHHHHHHHHHcCCCEEEE
Confidence 8 889999999999999999976
No 185
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.37 E-value=0.0005 Score=55.68 Aligned_cols=86 Identities=14% Similarity=0.207 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY-GTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~-~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.++.+.++|+|+++++.+ ....+..+++.++ + .++.++||+. +.+..+++..|||.+.+||+++.
T Consensus 118 ~~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~ 185 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAPAT----------RPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQ 185 (215)
T ss_dssp HHHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcC
Confidence 35577788999999988542 2344566666664 4 6888999984 33677888999999999999985
Q ss_pred HhhhcChHHHHHHHHHHHHHHHHHH
Q psy16780 154 GLAHSGKSGVRKVLDILINEFDQAL 178 (202)
Q Consensus 154 ~~~~~G~~~v~~~i~~l~~~L~~~m 178 (202)
+ ..+ .+.++.++++++...
T Consensus 186 a---~dp---~~a~~~i~~~i~~~~ 204 (215)
T 3ve9_A 186 S---ADP---VRKLEEIVRSQEEVL 204 (215)
T ss_dssp S---SSH---HHHHHHHHHHHHHHC
T ss_pred C---CCH---HHHHHHHHHHHHHHH
Confidence 3 222 344566666666544
No 186
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.34 E-value=0.0018 Score=52.80 Aligned_cols=87 Identities=14% Similarity=0.150 Sum_probs=62.1
Q ss_pred cHHHHHHHHHhcCCCEE--EEe------c---cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchH-HHHHHHHHHhCCC
Q psy16780 52 NWSDVTWLKTITKLPIV--LKG------I---LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASI-EALPEIAKAVGHK 119 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~--vK~------~---~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~-~~l~~i~~~~~~~ 119 (202)
..+.|+++|+.+++||+ .|. . .+.++++.+.++|+|.|.+....... +... +.+..+++ . .
T Consensus 57 ~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~----p~~l~~~i~~~~~-~--g 129 (229)
T 3q58_A 57 GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSR----PVDIDSLLTRIRL-H--G 129 (229)
T ss_dssp SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCC----SSCHHHHHHHHHH-T--T
T ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCC----hHHHHHHHHHHHH-C--C
Confidence 57899999999999987 231 1 34678999999999999886542211 1222 23444433 2 5
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 120 VDVYLDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~GAd~V~i 147 (202)
+++++ .+++.+++.++..+|||.|.+
T Consensus 130 ~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 130 LLAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp CEEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred CEEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 66665 589999999999999999975
No 187
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.33 E-value=0.0018 Score=52.81 Aligned_cols=87 Identities=18% Similarity=0.270 Sum_probs=61.8
Q ss_pred cHHHHHHHHHhcCCCEEE--Ee------c---cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHH-HHHHHHHHhCCC
Q psy16780 52 NWSDVTWLKTITKLPIVL--KG------I---LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIE-ALPEIAKAVGHK 119 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~v--K~------~---~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~-~l~~i~~~~~~~ 119 (202)
..+.|+++|+.+++||+- |- . .+.++++.+.++|+|.|.+....... +.... .+..+++ . .
T Consensus 57 ~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~----p~~l~~~i~~~~~-~--g 129 (232)
T 3igs_A 57 GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQR----PVAVEALLARIHH-H--H 129 (232)
T ss_dssp SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCC----SSCHHHHHHHHHH-T--T
T ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCC----HHHHHHHHHHHHH-C--C
Confidence 578999999999999962 31 1 35678999999999999886542211 22222 3344432 2 5
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 120 VDVYLDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~GAd~V~i 147 (202)
+++++ .+++.+++.++..+|||.+.+
T Consensus 130 ~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 130 LLTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp CEEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred CEEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 66665 589999999999999999975
No 188
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.30 E-value=0.0017 Score=55.11 Aligned_cols=96 Identities=20% Similarity=0.154 Sum_probs=62.8
Q ss_pred cHHHHHHHHHh---cCCCEEEEec-----c----CH-----HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHH
Q psy16780 52 NWSDVTWLKTI---TKLPIVLKGI-----L----TA-----EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAK 114 (202)
Q Consensus 52 ~~~~i~~i~~~---~~~Pv~vK~~-----~----~~-----~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~ 114 (202)
..+.++++.+. +++|+++=.. . ++ +.++.+.+.|+|.+.+.-.. + +..+++.+.++.+
T Consensus 140 ~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~----~-~~g~~~~~~~vv~ 214 (304)
T 1to3_A 140 RLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPL----Y-GKGARSDLLTASQ 214 (304)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGG----G-GCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCc----C-CCCCHHHHHHHHH
Confidence 34455555554 5899887543 1 12 23677888999999884310 0 0114455555554
Q ss_pred Hh-C-CCcE-EEEecCCCCHH----HHHHHHHhCCCEEEEcHHHHH
Q psy16780 115 AV-G-HKVD-VYLDGGVRYGT----DVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 115 ~~-~-~~ip-iia~GGI~~~~----D~~kal~~GAd~V~ig~~~l~ 153 (202)
.. . ..+| |+++||+ +.+ .+..++..||++|.+||.+..
T Consensus 215 ~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q 259 (304)
T 1to3_A 215 RLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWS 259 (304)
T ss_dssp HHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHG
T ss_pred hccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhC
Confidence 41 1 2789 9999999 553 477778899999999999875
No 189
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=97.29 E-value=0.0043 Score=50.08 Aligned_cols=102 Identities=16% Similarity=0.180 Sum_probs=69.9
Q ss_pred cHHHHHHHHHh--cCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHH---HhCCCcEEEEec
Q psy16780 52 NWSDVTWLKTI--TKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAK---AVGHKVDVYLDG 126 (202)
Q Consensus 52 ~~~~i~~i~~~--~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~---~~~~~ipiia~G 126 (202)
+++=++.++.. -++++-+=.+++..++..+.++|+++|... -||-.+.+.+....+.++.+ ..+.+..|++.
T Consensus 88 T~eGl~A~~~L~~~GI~vn~TlifS~~Qa~~Aa~AGa~yISPf--vgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ilaA- 164 (212)
T 3r8r_A 88 TSDGLKAVRALTDLGIKTNVTLIFNANQALLAARAGATYVSPF--LGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAA- 164 (212)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHHTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCeEEEec--cchhhhcCCChHHHHHHHHHHHHHcCCCCEEEEe-
Confidence 35544444432 377887777789999999999999988652 23433333344445554443 33335666664
Q ss_pred CCCCHHHHHHHHHhCCCEEEEcHHHHHHhh
Q psy16780 127 GVRYGTDVFKALALGAKMVFVGRPALWGLA 156 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig~~~l~~~~ 156 (202)
.+|+..++.++..+|||.+-+.-.++..+.
T Consensus 165 S~R~~~~v~~~a~~G~d~~Tip~~vl~~l~ 194 (212)
T 3r8r_A 165 SIRHPQHVTEAALRGAHIGTMPLKVIHALT 194 (212)
T ss_dssp SCCSHHHHHHHHHTTCSEEEECHHHHHHHT
T ss_pred cCCCHHHHHHHHHcCCCEEEcCHHHHHHHH
Confidence 599999999999999999999988887643
No 190
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.22 E-value=0.0004 Score=57.03 Aligned_cols=47 Identities=13% Similarity=0.277 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 105 SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 105 ~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
+.+.+.++++.. .++|++.-|||++++++.++.. |||+|.+|+++..
T Consensus 173 ~~~~v~~ir~~~-~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 173 DVSKVQAVSEHL-TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp CHHHHHHHHTTC-SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH
T ss_pred CHHHHHHHHHhc-CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec
Confidence 466677776543 3699999999999999998777 9999999999986
No 191
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=97.22 E-value=0.0015 Score=53.12 Aligned_cols=87 Identities=13% Similarity=0.165 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCH-HHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYG-TDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~-~D~~kal~~GAd~V~ig~~~l~ 153 (202)
...++.+.++|+|+++++.+ ..+.+..+++.++ + .++.++||+-. .+..+++..|||.+.+|||++.
T Consensus 125 ~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 45678888999999988542 2244566666664 4 57888999853 3577788899999999999986
Q ss_pred HhhhcChHHHHHHHHHHHHHHHHHHH
Q psy16780 154 GLAHSGKSGVRKVLDILINEFDQALA 179 (202)
Q Consensus 154 ~~~~~G~~~v~~~i~~l~~~L~~~m~ 179 (202)
+ ..+ .+..+.++++++....
T Consensus 193 A---~dP---~~aa~~i~~~i~~~~~ 212 (222)
T 4dbe_A 193 A---GNP---LTALRTINKIIEDKVM 212 (222)
T ss_dssp S---SSH---HHHHHHHHHHHHHHHH
T ss_pred C---CCH---HHHHHHHHHHHHHHHH
Confidence 3 222 2444566666665443
No 192
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=97.21 E-value=0.0011 Score=55.67 Aligned_cols=84 Identities=17% Similarity=0.097 Sum_probs=62.8
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHH-HhCCCcEEEEecCCC
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAK-AVGHKVDVYLDGGVR 129 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~-~~~~~ipiia~GGI~ 129 (202)
..+.|++|++.+++||+-|.. .....++.+..+|+|+|+-+. +.. ..+....+.+ .+ ++|+++ |++
T Consensus 56 dp~~I~~I~~aVsIPVm~k~righ~~EAqilea~GaD~IDese--vlt------pad~~~~I~k~~f--~vpfv~--~~~ 123 (291)
T 3o07_A 56 DPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESE--VLT------PADWTHHIEKDKF--KVPFVC--GAK 123 (291)
T ss_dssp CHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEEEEET--TSC------CSCSSCCCCGGGC--SSCEEE--EES
T ss_pred CHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHcCCCEEeccc--CCC------HHHHHHHhhhhcC--CCcEEe--eCC
Confidence 456999999999999999986 458899999999999996542 111 1111112212 22 678887 689
Q ss_pred CHHHHHHHHHhCCCEEEE
Q psy16780 130 YGTDVFKALALGAKMVFV 147 (202)
Q Consensus 130 ~~~D~~kal~~GAd~V~i 147 (202)
|.+++..++..||+.|..
T Consensus 124 ~l~EAlrri~eGA~mIrT 141 (291)
T 3o07_A 124 DLGEALRRINEGAAMIRT 141 (291)
T ss_dssp SHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHCCCCEEEe
Confidence 999999999999999875
No 193
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.18 E-value=0.0005 Score=63.02 Aligned_cols=76 Identities=22% Similarity=0.194 Sum_probs=56.2
Q ss_pred HHHHHHHHcCCcEEEeeccCcC-CCC-CccchHHHHHHHHHHhCCCcEEEEecCCCCH-----------HHHHHHHHhCC
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGR-QLD-YVPASIEALPEIAKAVGHKVDVYLDGGVRYG-----------TDVFKALALGA 142 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~-~~~-~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~-----------~D~~kal~~GA 142 (202)
+.|+.+.+.|+|.+++.+-.+. ... ....+.+.+.++++.+ .+||+..|||++. +++.+++.+||
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGa 361 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGA 361 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHHHcCC
Confidence 5688889999999988663321 100 1123456667766555 7999999999998 45999999999
Q ss_pred CEEEEcHHHHH
Q psy16780 143 KMVFVGRPALW 153 (202)
Q Consensus 143 d~V~ig~~~l~ 153 (202)
|.|.+|+..+.
T Consensus 362 d~V~igt~~~~ 372 (555)
T 1jvn_A 362 DKVSIGTDAVY 372 (555)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECCHHhh
Confidence 99999998764
No 194
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.10 E-value=0.0026 Score=51.71 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=58.6
Q ss_pred cHHHHHHHHHhcC-CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 52 NWSDVTWLKTITK-LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 52 ~~~~i~~i~~~~~-~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
..+.++++++.++ +-+....+++.+.++.+.++|+|+|+..+ .+.+.+...++ + .+|++. |+.|
T Consensus 55 ~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~----------~d~~v~~~ar~-~--g~~~i~--Gv~t 119 (224)
T 1vhc_A 55 AADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG----------LNPKIVKLCQD-L--NFPITP--GVNN 119 (224)
T ss_dssp HHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHH-T--TCCEEC--EECS
T ss_pred HHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECC----------CCHHHHHHHHH-h--CCCEEe--ccCC
Confidence 3568888888873 33444445788999999999999996421 12333444443 4 456555 4999
Q ss_pred HHHHHHHHHhCCCEEEE
Q psy16780 131 GTDVFKALALGAKMVFV 147 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~i 147 (202)
+.++.+++.+|||.|.+
T Consensus 120 ~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 120 PMAIEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999988
No 195
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.09 E-value=0.0058 Score=48.69 Aligned_cols=94 Identities=15% Similarity=0.124 Sum_probs=65.9
Q ss_pred cHHHHHHHHHhcCCCEEE--E-e--------ccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 52 NWSDVTWLKTITKLPIVL--K-G--------ILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~v--K-~--------~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
..+.++++++.+++|++- | . ..+.+.++.+.++|+|.|.++.......+ ....+.+..+++.+ +..
T Consensus 44 ~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~--~~~~~~i~~~~~~~-~~~ 120 (223)
T 1y0e_A 44 TKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPK--ETLDELVSYIRTHA-PNV 120 (223)
T ss_dssp SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSS--SCHHHHHHHHHHHC-TTS
T ss_pred CHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCcc--cCHHHHHHHHHHhC-CCc
Confidence 457899999999999952 1 1 03467889999999999998653211000 12235567777665 356
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 121 DVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
+++. ++.+.+++.++...|+|.++++.+
T Consensus 121 ~v~~--~~~t~~e~~~~~~~G~d~i~~~~~ 148 (223)
T 1y0e_A 121 EIMA--DIATVEEAKNAARLGFDYIGTTLH 148 (223)
T ss_dssp EEEE--ECSSHHHHHHHHHTTCSEEECTTT
T ss_pred eEEe--cCCCHHHHHHHHHcCCCEEEeCCC
Confidence 6665 578999999999999999987654
No 196
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.09 E-value=0.0026 Score=51.25 Aligned_cols=81 Identities=10% Similarity=0.058 Sum_probs=58.7
Q ss_pred cHHHHHHHHHhcC-CCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 52 NWSDVTWLKTITK-LPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 52 ~~~~i~~i~~~~~-~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
..+.++++++.++ +-+....+.+.+.++.+.++|+|+++..+ .+.+. .+.++.. .+|++. |+.|
T Consensus 54 ~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~----------~d~~v-~~~~~~~--g~~~i~--G~~t 118 (214)
T 1wbh_A 54 AVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG----------LTEPL-LKAATEG--TIPLIP--GIST 118 (214)
T ss_dssp HHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS----------CCHHH-HHHHHHS--SSCEEE--EESS
T ss_pred HHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC----------CCHHH-HHHHHHh--CCCEEE--ecCC
Confidence 3568888888874 33444445788999999999999997532 12222 2333444 567765 4999
Q ss_pred HHHHHHHHHhCCCEEEE
Q psy16780 131 GTDVFKALALGAKMVFV 147 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~i 147 (202)
+.++.+++.+|||.|.+
T Consensus 119 ~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 119 VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999988
No 197
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.00 E-value=0.0056 Score=52.65 Aligned_cols=105 Identities=18% Similarity=0.156 Sum_probs=62.1
Q ss_pred HHHH--HHcCCcEEEeeccCcCC----CCCc------cchHHHHHHHHHHhCCCcEEE-EecCCCCHHHHHHH----HHh
Q psy16780 78 AKIG--VEMGASAIMVSNHGGRQ----LDYV------PASIEALPEIAKAVGHKVDVY-LDGGVRYGTDVFKA----LAL 140 (202)
Q Consensus 78 a~~l--~~aG~d~I~v~~~gg~~----~~~~------~~~~~~l~~i~~~~~~~ipii-a~GGI~~~~D~~ka----l~~ 140 (202)
++.+ .+.|+|.+.+--.+... +..+ ....+.+.++.+.. .+|+| .+||+ +.++..+. +.+
T Consensus 194 ~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG~-~~~~fl~~v~~A~~a 270 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAGV-SAELFQETLVFAHKA 270 (332)
T ss_dssp HHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTTC-CHHHHHHHHHHHHHH
T ss_pred HHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC--CCCEEEECCCC-CHHHHHHHHHHHHHc
Confidence 4556 56799999985332110 1001 11122345544443 79965 69998 55565544 457
Q ss_pred CC--CEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhc
Q psy16780 141 GA--KMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSGCTSVGEIQRE 192 (202)
Q Consensus 141 GA--d~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~ 192 (202)
|| ++|.+||.... .++.-+.+.=.+..+.+|...|..+|++|+..
T Consensus 271 Ga~f~Gv~~GRnvwq-------~~v~~~~~~~~~~~~~~l~~~g~~~i~~l~~v 317 (332)
T 3iv3_A 271 GAKFNGVLCGRATWA-------GSVQVYMEEGKEAARQWLRTSGLQNINELNKV 317 (332)
T ss_dssp TCCCCEEEECHHHHT-------THHHHHHHHCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCcceEEeeHHHHH-------hhhhhhccccHHHHHHHHHHHhHHHHHHHHHH
Confidence 99 99999998764 23333333334456677777777777777654
No 198
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.99 E-value=0.0023 Score=52.08 Aligned_cols=81 Identities=12% Similarity=0.146 Sum_probs=58.9
Q ss_pred cHHHHHHHHHhc-CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 52 NWSDVTWLKTIT-KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 52 ~~~~i~~i~~~~-~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
..+.++++++.+ ++.+....+.+.+.++.+.++|+|+|+..+ .+.+. .+.++.+ .+|++. |+.|
T Consensus 64 ~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p~----------~d~~v-~~~~~~~--g~~~i~--G~~t 128 (225)
T 1mxs_A 64 GLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPG----------ITEDI-LEAGVDS--EIPLLP--GIST 128 (225)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSS----------CCHHH-HHHHHHC--SSCEEC--EECS
T ss_pred HHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeCC----------CCHHH-HHHHHHh--CCCEEE--eeCC
Confidence 355788888877 444555556788999999999999997421 12222 3333444 567665 4999
Q ss_pred HHHHHHHHHhCCCEEEE
Q psy16780 131 GTDVFKALALGAKMVFV 147 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~i 147 (202)
+.++.+++.+|||.|.+
T Consensus 129 ~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 129 PSEIMMGYALGYRRFKL 145 (225)
T ss_dssp HHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999988
No 199
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.0011 Score=55.10 Aligned_cols=68 Identities=18% Similarity=0.066 Sum_probs=55.4
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
.+.|+...+.|++.+.+-.-.+ .+.+.+.++++.+ .+|+...|||++. |+.+.+ +||+-|.+|+..+.
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred HHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Confidence 4678999999999988743211 3567788887776 7999999999987 999999 99999999998774
No 200
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.98 E-value=0.0045 Score=51.24 Aligned_cols=89 Identities=21% Similarity=0.309 Sum_probs=65.1
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
..+.+..+|+.+++||+.|.- .++.++..+..+|||+|.+...- ++ ..++..+.+.++.+ .+.+++. ++|
T Consensus 89 s~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~---l~--~~~l~~l~~~a~~l--Gl~~lvE--v~~ 159 (251)
T 1i4n_A 89 DPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARI---LT--AEQIKEIYEAAEEL--GMDSLVE--VHS 159 (251)
T ss_dssp CTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGG---SC--HHHHHHHHHHHHTT--TCEEEEE--ECS
T ss_pred CHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEeccc---CC--HHHHHHHHHHHHHc--CCeEEEE--eCC
Confidence 678999999999999999964 45556777999999999987641 10 12333333334444 4555553 679
Q ss_pred HHHHHHHHHh-CCCEEEEcH
Q psy16780 131 GTDVFKALAL-GAKMVFVGR 149 (202)
Q Consensus 131 ~~D~~kal~~-GAd~V~ig~ 149 (202)
.+++..++.+ |++.|++-.
T Consensus 160 ~eE~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 160 REDLEKVFSVIRPKIIGINT 179 (251)
T ss_dssp HHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEeC
Confidence 9999999999 999999865
No 201
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.93 E-value=0.0062 Score=50.30 Aligned_cols=72 Identities=22% Similarity=0.078 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
.+.++...++|+++|.+-.-.+ .. ....+.+..+++.+ ++||+.-++|.+..++..++++|||+|.++...+
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~--~f--~G~~~~l~~i~~~v--~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPH--RF--GGSLLDLKRVREAV--DLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCS--SS--CCCHHHHHHHHHHC--CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHHHHHHHcCCCEEEEecchh--hh--ccCHHHHHHHHHhc--CCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 5778999999999999843211 11 12455677777777 8999999999999999999999999999998766
No 202
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.89 E-value=0.0061 Score=52.23 Aligned_cols=95 Identities=18% Similarity=0.053 Sum_probs=65.7
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEeccC---HHHHHHHHHcC--CcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGILT---AEDAKIGVEMG--ASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~~---~~~a~~l~~aG--~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
.+++...+.++++++. ++|+.+-.... .+.++.+.++| ++.+.+....| .....++.+..+++..+ ..|
T Consensus 78 ~~~~~~~~~i~~~~~~-g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G----~~~~~~~~i~~lr~~~~-~~~ 151 (336)
T 1ypf_A 78 FQPEKRISFIRDMQSR-GLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHG----HSNAVINMIQHIKKHLP-ESF 151 (336)
T ss_dssp SSGGGHHHHHHHHHHT-TCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSC----CSHHHHHHHHHHHHHCT-TSE
T ss_pred CCCHHHHHHHHHHHhc-CCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCC----CcHHHHHHHHHHHHhCC-CCE
Confidence 3566666677777653 66777764333 34567788999 99988754211 11345667888877762 244
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 122 VYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
|+ .|++.+.+++.++..+|||+|.++
T Consensus 152 vi-~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 152 VI-AGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp EE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred EE-ECCcCCHHHHHHHHHcCCCEEEEe
Confidence 54 566999999999999999999993
No 203
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.85 E-value=0.0063 Score=52.93 Aligned_cols=69 Identities=14% Similarity=0.082 Sum_probs=52.9
Q ss_pred CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 74 TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 74 ~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+.+.++.+.++|+|.|+++...|.. ...++.+..+++.. +++||++ |++.|.+++.++..+|||+|.+|
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~----~~~~e~I~~ir~~~-~~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHA----KYVGKTLKSLRQLL-GSRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSS----HHHHHHHHHHHHHH-TTCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCc----HhHHHHHHHHHHhc-CCCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 4577899999999999986533321 12345677777765 3688888 67999999999999999999985
No 204
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.83 E-value=0.0013 Score=52.21 Aligned_cols=104 Identities=17% Similarity=0.124 Sum_probs=64.8
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEec------cCHHHHHHHHHcCCcEEEeeccC--------cC-------CCCC----
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGI------LTAEDAKIGVEMGASAIMVSNHG--------GR-------QLDY---- 101 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~------~~~~~a~~l~~aG~d~I~v~~~g--------g~-------~~~~---- 101 (202)
++-....+.++.+++. ++||++=.- .+..-++-+...++|+|+-+-.. |- -.|+
T Consensus 40 g~I~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsTk~~~i~~Akk~GL~tIqR~FliDs~al~ 118 (188)
T 1vkf_A 40 SDILNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITIKPKNYVVAKKNGIPAVLRFFALDSKAVE 118 (188)
T ss_dssp EETTTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEESCHHHHHHHHHTTCCEEEEEECCSHHHHH
T ss_pred CcHHHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcCcHHHHHHHHHcCCEEeeEEEEEEeHHHh
Confidence 3333345578888777 888887532 23444555556688887643210 10 0110
Q ss_pred -------------c--cchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 102 -------------V--PASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 102 -------------~--~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
. .|.. ..+++.+.+ .++|+|+.|+|++.+|+.+ +.+||++|..++.-+|.
T Consensus 119 ~~~~~I~~~kPD~iEiLPg~-v~p~~I~~v-~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 119 RGIEQIETLGVDVVEVLPGA-VAPKVARKI-PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp HHHHHHHHHTCSEEEEESGG-GHHHHHTTS-TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred hhhhhccccCCCeEeecCCC-chHHHHHHh-cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 0 0110 022333333 4789999999999999999 99999999999987774
No 205
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.82 E-value=0.0078 Score=50.91 Aligned_cols=92 Identities=18% Similarity=0.259 Sum_probs=56.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+.+++|||+--|=.+..++++ +-.+|||++++-.|
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 446778899999999988766432212222 2344555666777899987444344444443 23479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
++.. -..+++.++++.+
T Consensus 121 ~y~~---~~~~~l~~~f~~i 137 (304)
T 3cpr_A 121 YYSK---PSQEGLLAHFGAI 137 (304)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 7742 2345454444444
No 206
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.82 E-value=0.006 Score=51.61 Aligned_cols=95 Identities=13% Similarity=0.119 Sum_probs=59.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+--|=.+..++++ +-.+|||++++-.|
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 446778899999999987655322111111 2244555666777899997433334444443 23479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDILINE 173 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l~~~ 173 (202)
+++. -..+++.++++.+.+.
T Consensus 116 ~y~~---~s~~~l~~~f~~va~a 135 (303)
T 2wkj_A 116 FYYP---FSFEEHCDHYRAIIDS 135 (303)
T ss_dssp CSSC---CCHHHHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHHHHh
Confidence 8753 2456666666555443
No 207
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.81 E-value=0.0058 Score=51.43 Aligned_cols=93 Identities=19% Similarity=0.229 Sum_probs=58.2
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++-.|
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 446778899999999988655322111111 2244555666777899998555455566554 33479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDILI 171 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l~ 171 (202)
+++. -..+++.++++.+.
T Consensus 107 ~y~~---~~~~~l~~~f~~ia 124 (292)
T 3daq_A 107 YYNK---TNQRGLVKHFEAIA 124 (292)
T ss_dssp CSSC---CCHHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHHH
Confidence 8753 23444444444443
No 208
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=96.79 E-value=0.0062 Score=51.33 Aligned_cols=92 Identities=14% Similarity=0.203 Sum_probs=56.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHH----HHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKA----LALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~ka----l~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++. -.+|||++++-.|
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 346778899999999988765322111112 22345556667778999984444455555433 3479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 112 ~y~~---~~~~~l~~~f~~v 128 (297)
T 3flu_A 112 YYNK---PSQEGIYQHFKTI 128 (297)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8752 1334444444443
No 209
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.78 E-value=0.0065 Score=51.00 Aligned_cols=92 Identities=20% Similarity=0.283 Sum_probs=55.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+.+.+++++|||+--|=.+..++++ +-.+|||++++-.|
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 446778899999999987655322111111 2344555666777899987434334444443 23479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 105 ~y~~---~s~~~l~~~f~~i 121 (289)
T 2yxg_A 105 YYNK---PTQEGLRKHFGKV 121 (289)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8742 2344444444443
No 210
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.77 E-value=0.0057 Score=51.81 Aligned_cols=78 Identities=24% Similarity=0.266 Sum_probs=51.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHH----HhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKAL----ALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal----~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+.+++|||+.-|=.+..++++.. .+|||++++..|
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 446778899999999988665322111111 224455566677799999854444555555433 379999999999
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+++
T Consensus 120 ~y~ 122 (304)
T 3l21_A 120 YYS 122 (304)
T ss_dssp CSS
T ss_pred CCC
Confidence 875
No 211
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.77 E-value=0.0064 Score=51.12 Aligned_cols=93 Identities=12% Similarity=0.161 Sum_probs=57.2
Q ss_pred HHHHHHHH-cCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcH
Q psy16780 76 EDAKIGVE-MGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~-aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~ 149 (202)
..++.+++ .|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++-.
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 44677888 9999999987655322111111 2344555666777999988444444455443 3347999999999
Q ss_pred HHHHHhhhcChHHHHHHHHHHH
Q psy16780 150 PALWGLAHSGKSGVRKVLDILI 171 (202)
Q Consensus 150 ~~l~~~~~~G~~~v~~~i~~l~ 171 (202)
|+++. -..+++.++++.+.
T Consensus 108 P~y~~---~~~~~l~~~f~~va 126 (293)
T 1f6k_A 108 PFYYK---FSFPEIKHYYDTII 126 (293)
T ss_dssp CCSSC---CCHHHHHHHHHHHH
T ss_pred CCCCC---CCHHHHHHHHHHHH
Confidence 98753 23455555544443
No 212
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=96.77 E-value=0.02 Score=49.71 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=72.3
Q ss_pred CccccHHHHHHHHHhc-CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 48 DETINWSDVTWLKTIT-KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~-~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
++++..+.++.+|+.+ ++|+.+... .+.++ ++.+.+.|++.|.=- . .+.+++.+.++++.+ ++
T Consensus 173 ~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEqP------~--~~~~~~~~~~l~~~~--~i 242 (384)
T 2pgw_A 173 GEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQP------T--VSWSIPAMAHVREKV--GI 242 (384)
T ss_dssp CHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC------S--CTTCHHHHHHHHHHC--SS
T ss_pred CHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeCC------C--ChhhHHHHHHHHhhC--CC
Confidence 5566788999999988 688888743 45444 466778898887510 0 133677788888777 79
Q ss_pred EEEEecCCCCHHHHHHHHHhC-CCEEEEcHHH
Q psy16780 121 DVYLDGGVRYGTDVFKALALG-AKMVFVGRPA 151 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~G-Ad~V~ig~~~ 151 (202)
||++++.+.+..++.+++..| +|+|++....
T Consensus 243 PI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 243 PIVADQAAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp CEEESTTCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred CEEEeCCcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 999999999999999999986 8999997643
No 213
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=96.74 E-value=0.0066 Score=51.09 Aligned_cols=78 Identities=18% Similarity=0.173 Sum_probs=50.2
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++-.|
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 446778899999999987655322111111 2344555666777899987444344444443 23479999999999
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+++
T Consensus 105 ~y~ 107 (294)
T 2ehh_A 105 YYN 107 (294)
T ss_dssp CSS
T ss_pred CCC
Confidence 874
No 214
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.74 E-value=0.006 Score=51.55 Aligned_cols=92 Identities=15% Similarity=0.239 Sum_probs=55.5
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+.+++|||+--|=.+..++++ +-.+|||++++-.|
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 346778899999999987655322111111 2244555666777899987444334444443 33479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 117 ~y~~---~s~~~l~~~f~~v 133 (301)
T 1xky_A 117 YYNK---PSQEGMYQHFKAI 133 (301)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8742 1334444444433
No 215
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=96.73 E-value=0.0057 Score=52.08 Aligned_cols=92 Identities=13% Similarity=0.188 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHH----HHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKA----LALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~ka----l~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++. -.+|||++++..|
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 345678899999999987655322111112 22345556667778999984444455555543 3479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 128 ~y~~---~s~~~l~~~f~~v 144 (314)
T 3qze_A 128 YYNK---PTQEGMYQHFRHI 144 (314)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8752 2344444444443
No 216
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.70 E-value=0.007 Score=50.85 Aligned_cols=92 Identities=14% Similarity=0.245 Sum_probs=57.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++-.|
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 446778899999999987655322111111 2244555666777899998444445555554 33479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 106 ~y~~---~~~~~l~~~f~~i 122 (291)
T 3tak_A 106 YYNK---PTQEGLYQHYKAI 122 (291)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8752 2344444444443
No 217
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.70 E-value=0.0065 Score=52.11 Aligned_cols=91 Identities=10% Similarity=0.032 Sum_probs=55.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccc-hHHHHHHHHHHhCCCcEEEE-ecCCCCHHHHHH----HHHhCCCEEEEcH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPA-SIEALPEIAKAVGHKVDVYL-DGGVRYGTDVFK----ALALGAKMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~~ipiia-~GGI~~~~D~~k----al~~GAd~V~ig~ 149 (202)
..++.+++.|+|+|.+.|+.|....-... -.+.+..+++.+++++|||+ .|+.. ..++++ +-.+|||++++..
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s-t~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALR-TDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSS-HHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC-HHHHHHHHHHHHhcCCCEEEECC
Confidence 44677889999999998866532211111 12344555666777899987 44444 444443 3347999999999
Q ss_pred HHHHHhhhcChHHHHHHHHHH
Q psy16780 150 PALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 150 ~~l~~~~~~G~~~v~~~i~~l 170 (202)
|+++. -..+++.++++.+
T Consensus 138 P~Y~~---~s~~~l~~~f~~V 155 (332)
T 2r8w_A 138 VSYTP---LTQEEAYHHFAAV 155 (332)
T ss_dssp CCSSC---CCHHHHHHHHHHH
T ss_pred CCCCC---CCHHHHHHHHHHH
Confidence 98742 2344444444443
No 218
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.70 E-value=0.011 Score=49.56 Aligned_cols=72 Identities=18% Similarity=0.082 Sum_probs=57.0
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
.+.|+...++||++|.|-.-.+ ..+ ...+.+..+++.+ ++||+.-+.|.+..++.++.++|||+|.+....+
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~--~f~--Gs~~~L~~ir~~v--~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTP--SFQ--GAPEFLTAARQAC--SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCST--TTC--CCHHHHHHHHHTS--SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHHCCCCEEEEecccc--ccC--CCHHHHHHHHHhc--CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 3678899999999998854211 111 2456677777777 8999999999999999999999999999987655
No 219
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=96.70 E-value=0.04 Score=44.91 Aligned_cols=106 Identities=17% Similarity=0.224 Sum_probs=66.7
Q ss_pred CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHH---HHHHhCCCcEEEEecCCCCHHHHHHHHHh
Q psy16780 64 KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPE---IAKAVGHKVDVYLDGGVRYGTDVFKALAL 140 (202)
Q Consensus 64 ~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~---i~~~~~~~ipiia~GGI~~~~D~~kal~~ 140 (202)
++++-+=.+++.+++..+.++|++++...- ||-.+.+.+....+.+ +.+..+.+..+++. ++|++.++.++..+
T Consensus 113 GI~vNvTliFS~~QA~laa~AGa~~iSpFV--gRidd~g~dG~~~v~~i~~~~~~~~~~t~iL~A-S~r~~~~v~~~~l~ 189 (230)
T 1vpx_A 113 GIKTNVTLVFSPAQAILAAKAGATYVSPFV--GRMDDLSNDGMRMLGEIVEIYNNYGFETEIIAA-SIRHPMHVVEAALM 189 (230)
T ss_dssp TCCEEEEEECSHHHHHHHHHHTCSEEEEBH--HHHHHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-SCCSHHHHHHHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHhCCCeEEEecc--chhhhccccHHHHHHHHHHHHHHcCCCeEEEee-ccCCHHHHHHHHHh
Confidence 556655555677778778888888776532 2322222223333433 33444335667775 49999999999999
Q ss_pred CCCEEEEcHHHHHHhhhcC--hHHHHHHHHHHHH
Q psy16780 141 GAKMVFVGRPALWGLAHSG--KSGVRKVLDILIN 172 (202)
Q Consensus 141 GAd~V~ig~~~l~~~~~~G--~~~v~~~i~~l~~ 172 (202)
|+|.+-+.-..+..+...+ .++++.+.+.|.+
T Consensus 190 G~d~~Tip~~~l~~l~~h~lt~~gv~~F~~d~~~ 223 (230)
T 1vpx_A 190 GVDIVTMPFAVLEKLFKHPMTDLGIERFMEDWKK 223 (230)
T ss_dssp TCSEEEECHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 9999999988887654333 2445555544443
No 220
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.69 E-value=0.0059 Score=51.53 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=56.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+--|=.+..++++ +-.+|||++++-.|
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 446778899999999987655322111111 2244555666777899987434334444443 23479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 105 ~y~~---~s~~~l~~~f~~v 121 (297)
T 2rfg_A 105 YYNR---PSQEGLYQHFKMV 121 (297)
T ss_dssp TTTC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8753 2345454444444
No 221
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=96.68 E-value=0.0085 Score=50.58 Aligned_cols=78 Identities=15% Similarity=0.120 Sum_probs=51.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCC-CcEEEEecCCCCHHHHHHH----HHhCCCEEEEcH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGH-KVDVYLDGGVRYGTDVFKA----LALGAKMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~-~ipiia~GGI~~~~D~~ka----l~~GAd~V~ig~ 149 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++ ++|||+.-|=.+..++++. -.+|||++++-.
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 446778899999999987655322111111 2245556677777 8999984444455555543 347999999999
Q ss_pred HHHH
Q psy16780 150 PALW 153 (202)
Q Consensus 150 ~~l~ 153 (202)
|+++
T Consensus 112 P~y~ 115 (301)
T 3m5v_A 112 PYYN 115 (301)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9875
No 222
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=96.68 E-value=0.0046 Score=52.61 Aligned_cols=94 Identities=17% Similarity=0.093 Sum_probs=60.8
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHH----HhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKAL----ALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal----~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+.+++|||+.-|- +..++++.. .+|||++++..|
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P 115 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMP 115 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 345678899999999987655322111111 22455556667779999986553 767766533 479999999998
Q ss_pred HHHHhhhcChHHHHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDILINE 173 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l~~~ 173 (202)
++.. -..+++.++++.+.+.
T Consensus 116 ~y~~---~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 116 IHPY---VTAGGVYAYFRDIIEA 135 (316)
T ss_dssp CCSC---CCHHHHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHHHHh
Confidence 8642 2456666666665544
No 223
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.66 E-value=0.0065 Score=51.76 Aligned_cols=92 Identities=14% Similarity=0.170 Sum_probs=57.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++-.|
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 346778899999999987655322111111 2244555666777899998444445555554 33479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 127 ~y~~---~~~~~l~~~f~~v 143 (315)
T 3si9_A 127 YYNR---PNQRGLYTHFSSI 143 (315)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8752 2334444444443
No 224
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.66 E-value=0.0095 Score=47.61 Aligned_cols=79 Identities=23% Similarity=0.214 Sum_probs=58.3
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
.+.++.+++ -++.+....+.+.+.++.+.++|+|+++..+ .+.+.+... +.. .+|++. |+.|..
T Consensus 52 ~~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~----------~d~~v~~~~-~~~--g~~~i~--G~~t~~ 115 (207)
T 2yw3_A 52 LEALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSPG----------LLEEVAALA-QAR--GVPYLP--GVLTPT 115 (207)
T ss_dssp HHHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEESS----------CCHHHHHHH-HHH--TCCEEE--EECSHH
T ss_pred HHHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC----------CCHHHHHHH-HHh--CCCEEe--cCCCHH
Confidence 467888887 5666666666788999999999999997532 122333333 334 466665 489999
Q ss_pred HHHHHHHhCCCEEEE
Q psy16780 133 DVFKALALGAKMVFV 147 (202)
Q Consensus 133 D~~kal~~GAd~V~i 147 (202)
++.++...|||.|.+
T Consensus 116 e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 116 EVERALALGLSALKF 130 (207)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 999999999999988
No 225
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=96.65 E-value=0.0066 Score=51.54 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=49.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++..++++|||+.-|=.+..++++ +-.+|||++++-.|
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 346778899999999987655322111111 2244555666777999998544344444443 33479999999999
Q ss_pred HH
Q psy16780 151 AL 152 (202)
Q Consensus 151 ~l 152 (202)
++
T Consensus 113 yy 114 (309)
T 3fkr_A 113 YH 114 (309)
T ss_dssp CB
T ss_pred CC
Confidence 75
No 226
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.64 E-value=0.0057 Score=52.09 Aligned_cols=92 Identities=18% Similarity=0.158 Sum_probs=56.9
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++..|
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 446778899999999988655322111111 2244555666777899998444445555544 33479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 129 ~y~~---~s~~~l~~~f~~v 145 (315)
T 3na8_A 129 SYWK---LNEAEVFQHYRAV 145 (315)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8753 1334444444443
No 227
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.63 E-value=0.0045 Score=55.44 Aligned_cols=68 Identities=22% Similarity=0.290 Sum_probs=54.9
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.+.++++.++|+|.+++++.+|. ....++.+.++++.+ +.+|++ .|++.+.+++.+++.+|||+|.+|
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~-p~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGH----SAGVLRKIAEIRAHF-PNRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTT----CHHHHHHHHHHHHHC-SSSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCeEEEeeecCc----chhHHHHHHHHHHHC-CCCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 68899999999999999774431 123455677777766 379998 899999999999999999999887
No 228
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=96.62 E-value=0.0074 Score=50.80 Aligned_cols=95 Identities=14% Similarity=0.136 Sum_probs=57.9
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+.+++|||+.-|=.+..++++ +-.+|||++++-.|
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 446778899999999988655322111111 2234555666677899987433334444443 23479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDILIN 172 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l~~ 172 (202)
+++. .-..+++.++++.+.+
T Consensus 108 ~y~~--~~s~~~l~~~f~~va~ 127 (294)
T 3b4u_A 108 SYFK--NVSDDGLFAWFSAVFS 127 (294)
T ss_dssp CSSC--SCCHHHHHHHHHHHHH
T ss_pred cCCC--CCCHHHHHHHHHHHHH
Confidence 8752 0145656655555544
No 229
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.61 E-value=0.019 Score=46.03 Aligned_cols=89 Identities=16% Similarity=0.140 Sum_probs=62.8
Q ss_pred HHHHHHHHHhcCCCEEE--E-e-------c-cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 53 WSDVTWLKTITKLPIVL--K-G-------I-LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~v--K-~-------~-~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
.+.++.+++.+++|++- | . + .+.+.++.+.++|+|.|.++.......+ +....+.+..+++.+ +..+
T Consensus 58 ~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~-~~~~~~~i~~i~~~~-~~~~ 135 (234)
T 1yxy_A 58 VRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHD-GLDIASFIRQVKEKY-PNQL 135 (234)
T ss_dssp HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTT-CCCHHHHHHHHHHHC-TTCE
T ss_pred HHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCC-CccHHHHHHHHHHhC-CCCe
Confidence 56899999999999852 1 1 1 2468899999999999988653211110 112245667776665 3566
Q ss_pred EEEecCCCCHHHHHHHHHhCCCEE
Q psy16780 122 VYLDGGVRYGTDVFKALALGAKMV 145 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~GAd~V 145 (202)
++. ++++.+++.++..+|||.|
T Consensus 136 v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 136 LMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp EEE--ECSSHHHHHHHHHTTCSEE
T ss_pred EEE--eCCCHHHHHHHHHcCCCEE
Confidence 665 6889999999999999999
No 230
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.59 E-value=0.0061 Score=51.23 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHH----HhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKAL----ALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal----~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++.. .+|||++++-.|
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 446778899999999988765322111111 234455566677789998744444445555433 269999999998
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+++
T Consensus 106 ~y~ 108 (292)
T 2ojp_A 106 YYN 108 (292)
T ss_dssp CSS
T ss_pred CCC
Confidence 774
No 231
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.58 E-value=0.0067 Score=55.25 Aligned_cols=69 Identities=23% Similarity=0.299 Sum_probs=53.3
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
.+-+..|.++|+|.|++....|.. ...++.+..+++.+ ++++||+ |.|.|++-+...+.+|||+|-+|-
T Consensus 283 ~eR~~aLv~AGvD~iviD~ahGhs----~~v~~~i~~ik~~~-p~~~via-GNVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQGNS----VYQIEFIKWIKQTY-PKIDVIA-GNVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCCS----HHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhcCCcEEEEecccccc----HHHHHHHHHHHhhC-CcceEEe-ccccCHHHHHHHHHcCCCEEeecC
Confidence 355788999999999998754432 22355677777665 5788887 889999999999999999997763
No 232
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.57 E-value=0.0067 Score=51.40 Aligned_cols=78 Identities=22% Similarity=0.236 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+--|=.+..++++ +-.+|||++++-.|
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 446778899999999988655322111111 2244555666777899987444344444443 33479999999998
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+++
T Consensus 117 ~y~ 119 (306)
T 1o5k_A 117 YYN 119 (306)
T ss_dssp CSS
T ss_pred CCC
Confidence 774
No 233
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.56 E-value=0.0058 Score=52.01 Aligned_cols=92 Identities=13% Similarity=0.157 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEE-ecCCCCHHHHHHH----HHhCCCEEEEcH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYL-DGGVRYGTDVFKA----LALGAKMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia-~GGI~~~~D~~ka----l~~GAd~V~ig~ 149 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+.+++|||+ .|+ +..++++. -.+|||++++-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHHHHHHHHHcCCCEEEECC
Confidence 446778899999999977655322111111 2344555666777899987 555 55555433 347999999999
Q ss_pred HHHHHhhhcChHHHHHHHHHHHH
Q psy16780 150 PALWGLAHSGKSGVRKVLDILIN 172 (202)
Q Consensus 150 ~~l~~~~~~G~~~v~~~i~~l~~ 172 (202)
|+++. -..+++.++++.+.+
T Consensus 115 P~y~~---~s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 115 PVHPY---ITDAGAVEYYRNIIE 134 (314)
T ss_dssp CCCSC---CCHHHHHHHHHHHHH
T ss_pred CCCCC---CCHHHHHHHHHHHHH
Confidence 98753 234555555555443
No 234
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=96.56 E-value=0.0098 Score=50.69 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=49.9
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHH----HHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKA----LALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~ka----l~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+.+++|||+--|=.+..++++. -.+|||++++-.|
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 346778899999999988765322111111 22445556667778999984443455554433 3479999999999
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+++
T Consensus 116 ~y~ 118 (318)
T 3qfe_A 116 AYF 118 (318)
T ss_dssp CC-
T ss_pred ccc
Confidence 654
No 235
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.56 E-value=0.0077 Score=51.90 Aligned_cols=78 Identities=17% Similarity=0.201 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|+|.+.|+.|....-.... .+.+..+++.+.+++|||+--|=.+..++++ +-.+|||++++-.|
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 446778899999999987655322111111 2344555666777899987444344444443 33479999999999
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+++
T Consensus 136 ~Y~ 138 (343)
T 2v9d_A 136 YYW 138 (343)
T ss_dssp SSS
T ss_pred CCC
Confidence 874
No 236
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.51 E-value=0.0082 Score=48.77 Aligned_cols=81 Identities=19% Similarity=0.237 Sum_probs=48.0
Q ss_pred HHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCH-HHHHHHHHhCCCEEEEcHHHHHHh
Q psy16780 77 DAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYG-TDVFKALALGAKMVFVGRPALWGL 155 (202)
Q Consensus 77 ~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~-~D~~kal~~GAd~V~ig~~~l~~~ 155 (202)
.++.+.+.|+++++++.+ ..+.+..+++..+.+.++ .++||+-. .+. +++.+|||.+.+||+++.+
T Consensus 142 ~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a- 208 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA- 208 (228)
T ss_dssp HHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTS-
T ss_pred HHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC-
Confidence 356677888888877431 234556676666545666 77888753 467 8889999999999998642
Q ss_pred hhcChHHHHHHHHHHHHHHH
Q psy16780 156 AHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 156 ~~~G~~~v~~~i~~l~~~L~ 175 (202)
..+ .+.++.++++++
T Consensus 209 --~dp---~~a~~~~~~~~~ 223 (228)
T 3m47_A 209 --DNP---AAAAAGAIESIK 223 (228)
T ss_dssp --SCH---HHHHHHHHHHC-
T ss_pred --CCH---HHHHHHHHHHHH
Confidence 222 344555555554
No 237
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.50 E-value=0.0079 Score=50.53 Aligned_cols=78 Identities=15% Similarity=0.170 Sum_probs=49.5
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++-.|
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 446778899999999987655322111111 2244555666677899987333334444443 33479999999999
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+++
T Consensus 105 ~y~ 107 (292)
T 2vc6_A 105 YYN 107 (292)
T ss_dssp CSS
T ss_pred CCC
Confidence 774
No 238
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=96.46 E-value=0.0079 Score=51.66 Aligned_cols=92 Identities=15% Similarity=0.160 Sum_probs=70.6
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++.+|+.+ ++|+.++.. .+.++ ++.+.+.|++.|.= + ..+.+++.+.++++.+ +
T Consensus 171 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~---P-----~~~~~~~~~~~l~~~~--~ 240 (359)
T 1mdl_A 171 ALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEE---P-----TLQHDYEGHQRIQSKL--N 240 (359)
T ss_dssp SHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEEC---C-----SCTTCHHHHHHHHHTC--S
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEC---C-----CChhhHHHHHHHHHhC--C
Confidence 5666778999999987 688988854 45544 56677889887741 0 1123677778887766 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||++++.+.+..++.+++..| +|+|++-.
T Consensus 241 iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~ 271 (359)
T 1mdl_A 241 VPVQMGENWLGPEEMFKALSIGACRLAMPDA 271 (359)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred CCEEeCCCCCCHHHHHHHHHcCCCCEEeecc
Confidence 9999999999999999999986 89999864
No 239
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=96.44 E-value=0.011 Score=50.03 Aligned_cols=94 Identities=11% Similarity=0.117 Sum_probs=56.6
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++-.|
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 345677889999999988765322111111 2244555666677899888444345555443 33479999999998
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++.- .-..+++.++++.+
T Consensus 119 ~y~~~-~~s~~~l~~~f~~i 137 (307)
T 3s5o_A 119 CYYRG-RMSSAALIHHYTKV 137 (307)
T ss_dssp CTTGG-GCCHHHHHHHHHHH
T ss_pred CcCCC-CCCHHHHHHHHHHH
Confidence 87520 01345555555444
No 240
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.43 E-value=0.016 Score=45.77 Aligned_cols=80 Identities=19% Similarity=0.205 Sum_probs=57.9
Q ss_pred HHHHHHHHHhcCCCEEEEe--ccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 53 WSDVTWLKTITKLPIVLKG--ILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~--~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
.+.++++++.+++|++++. +.+.+.++.+.++|+|+|.+.. .+.+.+. .++.+ ..+++.. ++|
T Consensus 46 ~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~----------~~~~~~~-~~~~~--g~~~~~g--~~t 110 (212)
T 2v82_A 46 EQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN----------IHSEVIR-RAVGY--GMTVCPG--CAT 110 (212)
T ss_dssp HHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS----------CCHHHHH-HHHHT--TCEEECE--ECS
T ss_pred HHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC----------CCHHHHH-HHHHc--CCCEEee--cCC
Confidence 4577788877788988853 3678899999999999997422 1223333 33444 4555542 899
Q ss_pred HHHHHHHHHhCCCEEEE
Q psy16780 131 GTDVFKALALGAKMVFV 147 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~i 147 (202)
.+++.++..+|+|.|.+
T Consensus 111 ~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 111 ATEAFTALEAGAQALKI 127 (212)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999987
No 241
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=96.41 E-value=0.014 Score=50.32 Aligned_cols=92 Identities=13% Similarity=0.100 Sum_probs=70.5
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++.+|+.+ ++|+.++.. .+.++ ++.+.+.|++.|.=- ..+.+++.+.++++.+ +
T Consensus 173 ~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~ 242 (371)
T 2ovl_A 173 DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIEEP--------TIPDDLVGNARIVRES--G 242 (371)
T ss_dssp SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHHHH--C
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CCcccHHHHHHHHhhC--C
Confidence 5556778999999987 689998854 45544 466677888877410 1123577788888777 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||++++.+.+..++.+++..| +|+|++-.
T Consensus 243 iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 273 (371)
T 2ovl_A 243 HTIAGGENLHTLYDFHNAVRAGSLTLPEPDV 273 (371)
T ss_dssp SCEEECTTCCSHHHHHHHHHHTCCSEECCCT
T ss_pred CCEEeCCCCCCHHHHHHHHHcCCCCEEeeCc
Confidence 9999999999999999999986 89999864
No 242
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.41 E-value=0.0098 Score=53.59 Aligned_cols=68 Identities=22% Similarity=0.248 Sum_probs=53.6
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.+.++.+.++|+|.|.+....+. .....+.+.++++.+ +++||++ |++.+.+++..+..+|||+|.+|
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~----~~~~~~~v~~i~~~~-p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGH----SKGVIERVRWVKQTF-PDVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCS----BHHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhcccceEEecccCCc----chhHHHHHHHHHHHC-CCceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 57789999999999999754331 123455677777766 3688888 77999999999999999999985
No 243
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.40 E-value=0.019 Score=48.76 Aligned_cols=93 Identities=12% Similarity=0.086 Sum_probs=57.4
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHH----HHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKA----LALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~ka----l~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+ +++|||+.-|=.+..++++. -.+|||++++-.|
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 446778899999999987655322111111 23455556667 79999984444455555433 3479999999988
Q ss_pred HHHHhhhcChHHHHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDILINE 173 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l~~~ 173 (202)
+.+ ...+++.++++.+.+.
T Consensus 112 ~~~----~s~~~l~~~f~~va~a 130 (313)
T 3dz1_A 112 PSL----RTDEQITTYFRQATEA 130 (313)
T ss_dssp TTC----CSHHHHHHHHHHHHHH
T ss_pred CCC----CCHHHHHHHHHHHHHh
Confidence 732 2455555555554443
No 244
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.38 E-value=0.02 Score=47.79 Aligned_cols=71 Identities=23% Similarity=0.195 Sum_probs=54.6
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
+.|+...+.||++|.|-.-.+ . -....+.+..+++.+ ++||+.-+.|.+..++..+.++|||+|.++.+.+
T Consensus 76 ~~A~~y~~~GA~~isvltd~~--~--f~Gs~~~l~~ir~~v--~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l 146 (272)
T 3qja_A 76 KLAQAYQDGGARIVSVVTEQR--R--FQGSLDDLDAVRASV--SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAAL 146 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCGG--G--HHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGS
T ss_pred HHHHHHHHcCCCEEEEecChh--h--cCCCHHHHHHHHHhC--CCCEEECccccCHHHHHHHHHcCCCEEEEecccC
Confidence 668888899999999853211 0 011345677777777 8999999999999999999999999999975443
No 245
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.32 E-value=0.011 Score=53.32 Aligned_cols=69 Identities=20% Similarity=0.300 Sum_probs=54.6
Q ss_pred CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 74 TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 74 ~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+.+.++.+.++|+|.|.+....+. .....+.+.++++.+ +++||++ |++.+.+++..+..+|||+|.++
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~----~~~~~~~i~~ir~~~-p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAY-PHLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHC-TTCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHhccCceEEecccccc----chHHHHHHHHHHHHC-CCceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 478899999999999999764321 122445677777766 3688888 77999999999999999999985
No 246
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.31 E-value=0.0074 Score=53.16 Aligned_cols=67 Identities=30% Similarity=0.380 Sum_probs=50.8
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.+.++.++++|+|.|++..+.|. .....+.+.++++.+ .+||++ |++.+.+++.++..+|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~----~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS----BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 57889999999999988543221 011245566665554 688887 67899999999999999999995
No 247
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.29 E-value=0.0045 Score=52.29 Aligned_cols=92 Identities=12% Similarity=0.042 Sum_probs=55.4
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++ +-.+|||++++..|
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 346778899999999877655321111111 2244555666777899887333234444443 33479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
+++. -..+++.++++.+
T Consensus 109 ~y~~---~~~~~l~~~f~~v 125 (300)
T 3eb2_A 109 AYFP---LKDAQIESYFRAI 125 (300)
T ss_dssp CSSC---CCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 8753 2344444444443
No 248
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=96.29 E-value=0.081 Score=42.78 Aligned_cols=102 Identities=11% Similarity=0.116 Sum_probs=67.1
Q ss_pred HHHHHHHHHhc--CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHH---HHHHhCCCcEEEEecC
Q psy16780 53 WSDVTWLKTIT--KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPE---IAKAVGHKVDVYLDGG 127 (202)
Q Consensus 53 ~~~i~~i~~~~--~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~---i~~~~~~~ipiia~GG 127 (202)
++=++.++... ++++-+=.+++.+.+..+.++|++.+...- ||-.+.+.+....+.+ +.+..+.+..+++. +
T Consensus 90 ~eGl~A~~~L~~~GI~vn~TliFS~~QA~~aa~AGa~~iSpfv--gRidd~g~~G~~~i~~~~~~y~~~~~~t~il~A-S 166 (220)
T 1l6w_A 90 AEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAPYV--NRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA-S 166 (220)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECSHHHHHHHHHHTCSEEEEBH--HHHHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-C
T ss_pred HHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEecc--chhhcccccHHHHHHHHHHHHHhcCCCeEEeec-c
Confidence 44444443322 677777777888888888899988876532 3322222233344443 33433335666665 6
Q ss_pred CCCHHHHHHHHHhCCCEEEEcHHHHHHhhh
Q psy16780 128 VRYGTDVFKALALGAKMVFVGRPALWGLAH 157 (202)
Q Consensus 128 I~~~~D~~kal~~GAd~V~ig~~~l~~~~~ 157 (202)
+|++.++.++..+|+|.+-+.-.++..+..
T Consensus 167 ~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~ 196 (220)
T 1l6w_A 167 FKTPRQALDCLLAGCESITLPLDVAQQMIS 196 (220)
T ss_dssp CSSHHHHHHHHHTTCSEEEECHHHHHHTTC
T ss_pred cCCHHHHHHHHHhCCCeEECCHHHHHHHHc
Confidence 999999999999999999999888876543
No 249
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=96.26 E-value=0.016 Score=49.12 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=51.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHH----HHhCC-CEEEEcH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKA----LALGA-KMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~ka----l~~GA-d~V~ig~ 149 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+.+.+++++|||+.-|=.+..++++. -.+|| |++++..
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 456788999999999988765322111111 22445556667778999995554455555543 23697 9999999
Q ss_pred HHHH
Q psy16780 150 PALW 153 (202)
Q Consensus 150 ~~l~ 153 (202)
|+++
T Consensus 112 P~y~ 115 (311)
T 3h5d_A 112 PYYN 115 (311)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9875
No 250
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=96.21 E-value=0.014 Score=50.67 Aligned_cols=92 Identities=15% Similarity=0.195 Sum_probs=56.6
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHH----HHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKA----LALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~ka----l~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+.-|=.+..++++. -++|||++++-.|
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 346778899999999987655322111111 22445556667779999984443445555433 3479999999998
Q ss_pred HHHHhhhcChHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l 170 (202)
++.. -..+++.++++.+
T Consensus 164 yY~k---~sq~gl~~hf~~I 180 (360)
T 4dpp_A 164 YYGK---TSIEGLIAHFQSV 180 (360)
T ss_dssp CSSC---CCHHHHHHHHHTT
T ss_pred CCCC---CCHHHHHHHHHHH
Confidence 7642 2345555554444
No 251
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.18 E-value=0.0069 Score=49.62 Aligned_cols=100 Identities=10% Similarity=-0.016 Sum_probs=60.4
Q ss_pred cHHHHHHHHHhc--------CCCEEEEec-cCH-HHHHHHHHcCCcEEEe-eccCcCC-CCCccchHHHHHHHHHHhCC-
Q psy16780 52 NWSDVTWLKTIT--------KLPIVLKGI-LTA-EDAKIGVEMGASAIMV-SNHGGRQ-LDYVPASIEALPEIAKAVGH- 118 (202)
Q Consensus 52 ~~~~i~~i~~~~--------~~Pv~vK~~-~~~-~~a~~l~~aG~d~I~v-~~~gg~~-~~~~~~~~~~l~~i~~~~~~- 118 (202)
..+.++++++.. ++-+.+=+. .|+ +.++.. ..++|.|.+ +-+.|.. ....+...+.++++++....
T Consensus 106 ~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~-l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~ 184 (237)
T 3cu2_A 106 FALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPY-LDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNR 184 (237)
T ss_dssp HHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTT-TTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHH-hhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhc
Confidence 345777776541 333333222 233 233333 347998865 2222221 11123345556666665532
Q ss_pred --CcEEEEecCCCCHHHHHHHHH--hCCCEEEEcHHHHH
Q psy16780 119 --KVDVYLDGGVRYGTDVFKALA--LGAKMVFVGRPALW 153 (202)
Q Consensus 119 --~ipiia~GGI~~~~D~~kal~--~GAd~V~ig~~~l~ 153 (202)
++||.++|||. .+.+.++.. +|||.+.+||+++.
T Consensus 185 ~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 185 RVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp GGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGGS
T ss_pred CCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHhC
Confidence 58999999997 788999999 99999999999873
No 252
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=96.17 E-value=0.0073 Score=50.73 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=50.3
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHHHH----HHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVFKA----LALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~ka----l~~GAd~V~ig~~ 150 (202)
..++.+++.|+|++.+.|+.|....-.... .+.+..+++.+++++|||+--|=.+..++++. -.+|||++++-.|
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 446778899999999988655322111111 23445556667778999874443444554432 3479999999998
Q ss_pred HHH
Q psy16780 151 ALW 153 (202)
Q Consensus 151 ~l~ 153 (202)
+++
T Consensus 106 ~y~ 108 (291)
T 3a5f_A 106 YYN 108 (291)
T ss_dssp CSS
T ss_pred CCC
Confidence 764
No 253
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.11 E-value=0.017 Score=52.07 Aligned_cols=68 Identities=16% Similarity=0.185 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.+.++.+.++|+|.|.++...|.. ...++.+..+++.+ +++||++ |++.+.+++.++..+|||++.+|
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~----~~~~~~i~~i~~~~-~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNS----VYQIAMVHYIKQKY-PHLQVIG-GNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCS----HHHHHHHHHHHHHC-TTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeeccCCcc----hhHHHHHHHHHHhC-CCCceEe-cccchHHHHHHHHHcCCCEEEEC
Confidence 567888999999999995543311 12356678887776 4789987 77999999999999999999773
No 254
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=96.03 E-value=0.022 Score=48.39 Aligned_cols=62 Identities=23% Similarity=0.211 Sum_probs=43.9
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH----------HHHHHHHhCCCEEEE
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT----------DVFKALALGAKMVFV 147 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~----------D~~kal~~GAd~V~i 147 (202)
++.+.++|+|+++.+.. . +..+++.++ .-.++.++||+-.. .+.+++.+|||.+.+
T Consensus 164 A~~a~~~G~dGvV~s~~----------E---~~~IR~~~~-~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVv 229 (303)
T 3ru6_A 164 SKISYENGLDGMVCSVF----------E---SKKIKEHTS-SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVV 229 (303)
T ss_dssp HHHHHHTTCSEEECCTT----------T---HHHHHHHSC-TTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEECHH----------H---HHHHHHhCC-CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEE
Confidence 45567899999877431 1 345555554 34488899998321 466778899999999
Q ss_pred cHHHHH
Q psy16780 148 GRPALW 153 (202)
Q Consensus 148 g~~~l~ 153 (202)
||+++.
T Consensus 230 Gr~I~~ 235 (303)
T 3ru6_A 230 GRPIYK 235 (303)
T ss_dssp CHHHHT
T ss_pred ChHHhC
Confidence 999875
No 255
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=96.02 E-value=0.064 Score=43.47 Aligned_cols=91 Identities=24% Similarity=0.202 Sum_probs=61.5
Q ss_pred CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHH---HHHhCCCcEEEEecCCCCHHHHHHHHHh
Q psy16780 64 KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEI---AKAVGHKVDVYLDGGVRYGTDVFKALAL 140 (202)
Q Consensus 64 ~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i---~~~~~~~ipiia~GGI~~~~D~~kal~~ 140 (202)
++++-+=++++.+++..+.++|++.+... -||-.+.+.+....+.++ .+..+.+..+++. ++|++.++.++..+
T Consensus 110 GI~vN~TliFS~~Qa~~aa~AGa~~iSpF--VgRidd~g~~G~~~v~~i~~~~~~~~~~t~vl~A-S~r~~~~v~~~~l~ 186 (223)
T 1wx0_A 110 GIKVNMTLIFSANQALLAARAGASYVSPF--LGRVDDISWDGGELLREIVEMIQVQDLPVKVIAA-SIRHPRHVTEAALL 186 (223)
T ss_dssp TCCEEEEEECSHHHHHHHHHTTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHTTCSCEEEEB-CCCSHHHHHHHHHT
T ss_pred CCcEEEEEeCCHHHHHHHHHCCCeEEEec--cchHhhcCCCHHHHHHHHHHHHHHcCCCeEEeec-ccCCHHHHHHHHHh
Confidence 66776666678888888888888877653 233222233334444444 3333335566665 69999999999999
Q ss_pred CCCEEEEcHHHHHHhhh
Q psy16780 141 GAKMVFVGRPALWGLAH 157 (202)
Q Consensus 141 GAd~V~ig~~~l~~~~~ 157 (202)
|+|.+-+.-.++..+..
T Consensus 187 G~d~~Tip~~~l~~l~~ 203 (223)
T 1wx0_A 187 GADIATMPHAVFKQLLK 203 (223)
T ss_dssp TCSEEEECHHHHHHHTC
T ss_pred CCCEEECCHHHHHHHHc
Confidence 99999999888876543
No 256
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=96.00 E-value=0.013 Score=50.46 Aligned_cols=92 Identities=17% Similarity=0.069 Sum_probs=53.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHH----HHHhCCCEEEEcHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFK----ALALGAKMVFVGRPA 151 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~k----al~~GAd~V~ig~~~ 151 (202)
..++.+++.|+|+|.+.|+.|....-.......+.+. .+.+++|||+--|=.+..++++ +-.+|||++++-.|+
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 3456788999999999876553211111122222232 3456899987444344444443 334799999999998
Q ss_pred HHHhhhcChHHHHHHHHHHH
Q psy16780 152 LWGLAHSGKSGVRKVLDILI 171 (202)
Q Consensus 152 l~~~~~~G~~~v~~~i~~l~ 171 (202)
++. .-..+++.++++.+.
T Consensus 129 y~~--~~s~~~l~~~f~~IA 146 (344)
T 2hmc_A 129 LSR--GSVIAAQKAHFKAIL 146 (344)
T ss_dssp SSS--TTCHHHHHHHHHHHH
T ss_pred cCC--CCCHHHHHHHHHHHH
Confidence 752 013455555544443
No 257
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.95 E-value=0.041 Score=45.63 Aligned_cols=78 Identities=24% Similarity=0.415 Sum_probs=50.7
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH----H------HHHHHHhCCCEEEE
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT----D------VFKALALGAKMVFV 147 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~----D------~~kal~~GAd~V~i 147 (202)
++.+.++|+|+++.+. ..+..+++.+++ -.++.+.||+-.. | +.+++.+|||.+.+
T Consensus 150 A~~a~~~G~dGvV~s~-------------~e~~~ir~~~~~-~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVv 215 (259)
T 3tfx_A 150 AKMAKHSGADGVICSP-------------LEVKKLHENIGD-DFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVV 215 (259)
T ss_dssp HHHHHHTTCCEEECCG-------------GGHHHHHHHHCS-SSEEEECCCCCC-----------CHHHHHHTTCSEEEE
T ss_pred HHHHHHhCCCEEEECH-------------HHHHHHHhhcCC-ccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEE
Confidence 4556788999998742 123444555543 3467889998542 2 77888999999999
Q ss_pred cHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 148 GRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 148 g~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
||+++.+ ..+ .+.++.++++++
T Consensus 216 Gr~I~~a---~dp---~~a~~~i~~~~~ 237 (259)
T 3tfx_A 216 GRPITLA---SDP---KAAYEAIKKEFN 237 (259)
T ss_dssp CHHHHTS---SSH---HHHHHHHHHHHT
T ss_pred ChHHhCC---CCH---HHHHHHHHHHHH
Confidence 9998752 222 344556665544
No 258
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.93 E-value=0.0042 Score=52.06 Aligned_cols=79 Identities=24% Similarity=0.301 Sum_probs=57.5
Q ss_pred HhcCCCEEEEeccCHHHHHHHHHcCCcEEEeec--------cCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 61 TITKLPIVLKGILTAEDAKIGVEMGASAIMVSN--------HGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 61 ~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~--------~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
+....|+++ .+...+.++.+.++|+++|.+.. .+|.. .....+.+.++++.+ ++|++...++.+.+
T Consensus 18 ~~~~~~~i~-~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~---~~~~~~~i~~i~~~~--~~Pvi~~~~~~~~~ 91 (297)
T 2zbt_A 18 EMFKGGVIM-DVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVA---RMSDPKIIKEIMAAV--SIPVMAKVRIGHFV 91 (297)
T ss_dssp GGGTTEEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC---CCCCHHHHHHHHTTC--SSCEEEEEETTCHH
T ss_pred HHhhCCeee-eechHHHHHHHHHCCCcEEEeccccchHHHhhcCCc---cCCCHHHHHHHHHhc--CCCeEEEeccCCHH
Confidence 344678876 44568999999999999998721 11111 122455677776655 79999988888888
Q ss_pred HHHHHHHhCCCEE
Q psy16780 133 DVFKALALGAKMV 145 (202)
Q Consensus 133 D~~kal~~GAd~V 145 (202)
++..++++|||+|
T Consensus 92 ~~~~~~~aGad~v 104 (297)
T 2zbt_A 92 EAMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHCCCCEE
Confidence 9999999999999
No 259
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=95.93 E-value=0.041 Score=49.80 Aligned_cols=68 Identities=19% Similarity=0.269 Sum_probs=52.3
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.+.++.+.++|+|.|.+....+. ....++.+.++++.+ +++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~----~~~v~~~i~~i~~~~-~~~~vi~-g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH----SQGVIDKVKEVRAKY-PSLNIIA-GNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhhccceEEecccccc----hhhhhhHHHHHHHhC-CCceEEe-eeeccHHHHHHHHHhCCCEEEEC
Confidence 57788899999999999764321 122445677777766 3588886 77999999999999999999873
No 260
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=95.93 E-value=0.059 Score=45.61 Aligned_cols=85 Identities=19% Similarity=0.171 Sum_probs=63.2
Q ss_pred ccccHHHHHHHHHhcCCCEEEEeccC--------HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 49 ETINWSDVTWLKTITKLPIVLKGILT--------AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~Pv~vK~~~~--------~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
++...+.++++++.++.|+.+-+..+ .+.++.+.+.|+|.|.++.. .+ .+.+..+++. .+
T Consensus 52 ~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g--------~p-~~~~~~l~~~---gi 119 (328)
T 2gjl_A 52 PEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGN--------DP-GEHIAEFRRH---GV 119 (328)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEES--------CC-HHHHHHHHHT---TC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCC--------Cc-HHHHHHHHHc---CC
Confidence 55556778889888888887765543 36788899999999998542 11 3445555442 68
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 121 DVYLDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~GAd~V~i 147 (202)
|++. .+.+.+++.++...|+|++.+
T Consensus 120 ~vi~--~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 120 KVIH--KCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp EEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred CEEe--eCCCHHHHHHHHHcCCCEEEE
Confidence 8885 378999999999999999988
No 261
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=95.88 E-value=0.016 Score=50.36 Aligned_cols=92 Identities=13% Similarity=0.028 Sum_probs=69.7
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
++++ .+.++.+|+.+ ++|+.++.. .+.++ ++.+.+.|++.|.= + ..+.+++.+.++++.+ +
T Consensus 191 ~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~--~ 259 (388)
T 2nql_A 191 DDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFAEA---P-----VWTEDIAGLEKVSKNT--D 259 (388)
T ss_dssp TTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCEEC---C-----SCTTCHHHHHHHHTSC--C
T ss_pred ChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEEC---C-----CChhhHHHHHHHHhhC--C
Confidence 5677 89999999987 689998854 45544 45667788887741 0 1123567777777665 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
+||++++.+.+..++.+++..| +|+|++-..
T Consensus 260 iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 291 (388)
T 2nql_A 260 VPIAVGEEWRTHWDMRARIERCRIAIVQPEMG 291 (388)
T ss_dssp SCEEECTTCCSHHHHHHHHTTSCCSEECCCHH
T ss_pred CCEEEeCCcCCHHHHHHHHHcCCCCEEEecCC
Confidence 9999999999999999999987 899998543
No 262
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=95.84 E-value=0.024 Score=49.06 Aligned_cols=89 Identities=11% Similarity=0.014 Sum_probs=66.9
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
++++..+.++.+|+.+ ++|+.++.. .+.+++ +.+.+.|+ .|. +. .++++.+.++++.+ +
T Consensus 171 ~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------~P---~~~~~~~~~l~~~~--~ 237 (379)
T 2rdx_A 171 DWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILE-------QP---CRSYEECQQVRRVA--D 237 (379)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEE-------CC---SSSHHHHHHHHTTC--C
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEe-------CC---cCCHHHHHHHHhhC--C
Confidence 4566778999999987 589998854 455554 45556777 653 10 11667777777665 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||++++.+.+..++.+++..| +|+|++-.
T Consensus 238 iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 268 (379)
T 2rdx_A 238 QPMKLDECVTGLHMAQRIVADRGAEICCLKI 268 (379)
T ss_dssp SCEEECTTCCSHHHHHHHHHHTCCSEEEEET
T ss_pred CCEEEeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 9999999999999999999987 89999844
No 263
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=95.83 E-value=0.034 Score=48.42 Aligned_cols=93 Identities=11% Similarity=0.075 Sum_probs=69.9
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
++++..+.++.+|+.+ ++|+.+... .+.++ ++.+.+.|++.|.=- ..+.+++.+.++++.+ +
T Consensus 189 ~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~ 258 (393)
T 2og9_A 189 DGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEEP--------LDAYDHEGHAALALQF--D 258 (393)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECC--------SCTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEECC--------CCcccHHHHHHHHHhC--C
Confidence 4566778999999986 689998753 45544 455667788877410 0123567778887777 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
+||++++.+.+..++.+++..| +|+|++--.
T Consensus 259 iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 290 (393)
T 2og9_A 259 TPIATGEMLTSAAEHGDLIRHRAADYLMPDAP 290 (393)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred CCEEeCCCcCCHHHHHHHHHCCCCCEEeeCcc
Confidence 9999999999999999999987 899988543
No 264
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=95.77 E-value=0.044 Score=47.34 Aligned_cols=93 Identities=9% Similarity=0.087 Sum_probs=70.7
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++.+|+.+ ++|+.+... .+.++ ++.+.+.|++.+.=- ..+.+++.+.++++.+ +
T Consensus 182 ~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~ 251 (382)
T 1rvk_A 182 DVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFDWIEEP--------MDEQSLSSYKWLSDNL--D 251 (382)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCSEEECC--------SCTTCHHHHHHHHHHC--S
T ss_pred chHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCC--------CChhhHHHHHHHHhhC--C
Confidence 4566778999999987 688998854 45544 466777888877420 0123567778887776 7
Q ss_pred cEEEEecCCCC-HHHHHHHHHhC-CCEEEEcHH
Q psy16780 120 VDVYLDGGVRY-GTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 120 ipiia~GGI~~-~~D~~kal~~G-Ad~V~ig~~ 150 (202)
+||++++.+.+ ..++.+++..| +|+|++--.
T Consensus 252 iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 252 IPVVGPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp SCEEECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred CCEEEeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 99999999999 99999999987 899998654
No 265
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=95.74 E-value=0.07 Score=46.48 Aligned_cols=93 Identities=6% Similarity=-0.027 Sum_probs=70.7
Q ss_pred Cc-cccHHHHHHHHHhc--CCCEEEEec--c--CHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHH-H
Q psy16780 48 DE-TINWSDVTWLKTIT--KLPIVLKGI--L--TAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAK-A 115 (202)
Q Consensus 48 d~-~~~~~~i~~i~~~~--~~Pv~vK~~--~--~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~-~ 115 (202)
++ +...+.++.+|+.+ ++|+.++.. . +.++ ++.+.+.|++.|.=- . .+.+++.+.++++ .
T Consensus 174 ~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iEqP------~--~~~d~~~~~~l~~~~ 245 (401)
T 2hzg_A 174 GTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEEP------F--DAGALAAHAALAGRG 245 (401)
T ss_dssp SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEECC------S--CTTCHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEECC------C--CccCHHHHHHHHhhC
Confidence 44 56678999999987 689998854 5 7665 466778898887410 0 1235667777766 5
Q ss_pred hCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 116 VGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 116 ~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
+ ++||++++.+.+..++.+++..| +|+|++-..
T Consensus 246 ~--~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 279 (401)
T 2hzg_A 246 A--RVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCG 279 (401)
T ss_dssp C--SSEEEECTTCSSHHHHHHHHHHSCCSEEEECHH
T ss_pred C--CCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcc
Confidence 5 79999999999999999999986 899999654
No 266
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=95.73 E-value=0.036 Score=48.22 Aligned_cols=90 Identities=16% Similarity=0.078 Sum_probs=69.3
Q ss_pred ccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 49 ETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
+++..+.++++|+.+ ++|+.++.. .+.++ ++.+.+.|++.|.-- . .+.+++.+.++++.+ ++
T Consensus 177 ~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP------~--~~~d~~~~~~l~~~~--~i 246 (391)
T 2qgy_A 177 LSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEEP------V--DGENISLLTEIKNTF--NM 246 (391)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEECS------S--CTTCHHHHHHHHHHC--SS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeCC------C--ChhhHHHHHHHHhhC--CC
Confidence 466778999999987 689999854 45544 456677888877520 0 123567778887777 79
Q ss_pred EEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 121 DVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
||++++.+.+..++.+++..| +|+|++-
T Consensus 247 PIa~dE~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 247 KVVTGEKQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp CEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred CEEEcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 999999999999999999987 8999884
No 267
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=95.70 E-value=0.013 Score=46.58 Aligned_cols=46 Identities=24% Similarity=0.297 Sum_probs=40.0
Q ss_pred ccccHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeecc
Q psy16780 49 ETINWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNH 94 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~ 94 (202)
|-..-++|+++++.+++|+++++- .+.++++.++++||++|..++.
T Consensus 135 PGi~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 135 PGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp CTTCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred CchhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 444567999999999999999974 7899999999999999998764
No 268
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=95.68 E-value=0.042 Score=44.96 Aligned_cols=78 Identities=18% Similarity=0.343 Sum_probs=47.3
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH-H---------HHHHHHhCCCEEEE
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT-D---------VFKALALGAKMVFV 147 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~-D---------~~kal~~GAd~V~i 147 (202)
++.+.++|+++++.+.+ . ...+++.++++. ++.+.||+-.. + ..+++.+|||.+.+
T Consensus 150 A~~a~~~g~~GvV~s~~----------e---~~~ir~~~~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVv 215 (239)
T 3tr2_A 150 ATLAKSAGLDGVVCSAQ----------E---AALLRKQFDRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVI 215 (239)
T ss_dssp HHHHHHHTCCEEECCHH----------H---HHHHHTTCCTTS-EEEECCBC----------CCBCHHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEECch----------h---HHHHHHhcCCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEE
Confidence 44556779999987542 1 133444443333 77889998532 2 56788899999999
Q ss_pred cHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 148 GRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 148 g~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
||+++.+ ..+ .+.++.++++++
T Consensus 216 Gr~I~~a---~dp---~~a~~~i~~~i~ 237 (239)
T 3tr2_A 216 GRPITQS---TDP---LKALEAIDKDIK 237 (239)
T ss_dssp CHHHHTS---SSH---HHHHHHHHHHC-
T ss_pred ChHHhCC---CCH---HHHHHHHHHHHh
Confidence 9998752 222 244455555543
No 269
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.64 E-value=0.033 Score=49.91 Aligned_cols=68 Identities=25% Similarity=0.263 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.+.++.+.++|+|.|.++...|. ....++.+..+++.++ ++||++ |++.+.+++.++..+|||++.++
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~----~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGH----SRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEecCCc----hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 57788999999999999654331 1225667788877763 588887 77899999999999999999984
No 270
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=95.59 E-value=0.053 Score=44.85 Aligned_cols=77 Identities=19% Similarity=0.376 Sum_probs=49.6
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC-HHH---------HHHHHHhCCCEEEE
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY-GTD---------VFKALALGAKMVFV 147 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~-~~D---------~~kal~~GAd~V~i 147 (202)
++.+.++|+++++++. .-+..+++.++++. ++.+.||+- +.+ ..+++.+|||.+.+
T Consensus 168 A~~a~~aG~~GvV~sa-------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVv 233 (255)
T 3ldv_A 168 ATLTKNAGLDGVVCSA-------------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVI 233 (255)
T ss_dssp HHHHHHTTCSEEECCH-------------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEECH-------------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEE
Confidence 4455678999998743 12345555565444 667788874 223 56788899999999
Q ss_pred cHHHHHHhhhcChHHHHHHHHHHHHHH
Q psy16780 148 GRPALWGLAHSGKSGVRKVLDILINEF 174 (202)
Q Consensus 148 g~~~l~~~~~~G~~~v~~~i~~l~~~L 174 (202)
||+++.+ ..+ .+.++.+++++
T Consensus 234 Gr~I~~a---~dp---~~a~~~i~~ei 254 (255)
T 3ldv_A 234 GRPITQA---AHP---EVVLEEINSSL 254 (255)
T ss_dssp CHHHHTC---SCH---HHHHHHHHHHC
T ss_pred CHHHhCC---CCH---HHHHHHHHHhh
Confidence 9998852 222 34445565553
No 271
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.56 E-value=0.054 Score=45.78 Aligned_cols=84 Identities=17% Similarity=0.130 Sum_probs=59.6
Q ss_pred HHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcC--CCCCc---cchHHHHHHHHHHhCCCcEEEEecCCCCHHH
Q psy16780 59 LKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGR--QLDYV---PASIEALPEIAKAVGHKVDVYLDGGVRYGTD 133 (202)
Q Consensus 59 i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~--~~~~~---~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D 133 (202)
+.+..+.-|+ ..+.+++.|+...++||+.|.+-...-+ ...++ ..+.+.+.++++.+ .+||++-+++.+..+
T Consensus 16 ~~~~~kggv~-~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v--~iPvl~k~~i~~ide 92 (297)
T 4adt_A 16 WCEMLKGGVI-MDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI--SINVLAKVRIGHFVE 92 (297)
T ss_dssp HHHTTTTCEE-EEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC--CSEEEEEEETTCHHH
T ss_pred HHHHhcCCcc-cCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc--CCCEEEeccCCcHHH
Confidence 3333444444 4667889999999999999987521111 11111 23677888888877 899999888888888
Q ss_pred HHHHHHhCCCEE
Q psy16780 134 VFKALALGAKMV 145 (202)
Q Consensus 134 ~~kal~~GAd~V 145 (202)
+..+.++|||+|
T Consensus 93 ~qil~aaGAD~I 104 (297)
T 4adt_A 93 AQILEELKVDML 104 (297)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHHcCCCEE
Confidence 877788999999
No 272
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=95.46 E-value=0.11 Score=45.10 Aligned_cols=92 Identities=16% Similarity=0.149 Sum_probs=69.4
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.= + ..+.+++.+.++++.. .
T Consensus 176 ~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~--~ 245 (383)
T 3i4k_A 176 DPAEDTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELFEQ---P-----TPADDLETLREITRRT--N 245 (383)
T ss_dssp CHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEES---C-----SCTTCHHHHHHHHHHH--C
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C-----CChhhHHHHHHHHhhC--C
Confidence 5556677899999987 578888754 45544 46677888888751 0 0122466778887777 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||++++.+.+..|+.+++..| +|.|++--
T Consensus 246 iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 246 VSVMADESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp CEEEESTTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred CCEEecCccCCHHHHHHHHHcCCCCEEEEcc
Confidence 9999999999999999999987 89999864
No 273
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=95.44 E-value=0.35 Score=40.93 Aligned_cols=113 Identities=19% Similarity=0.138 Sum_probs=77.8
Q ss_pred cCHHHHHHHHHcCCcEEEeeccCcCCCC--C-ccchHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHHhCCCEEEEc
Q psy16780 73 LTAEDAKIGVEMGASAIMVSNHGGRQLD--Y-VPASIEALPEIAKAVGHKVDVYLDGGVRY-GTDVFKALALGAKMVFVG 148 (202)
Q Consensus 73 ~~~~~a~~l~~aG~d~I~v~~~gg~~~~--~-~~~~~~~l~~i~~~~~~~ipiia~GGI~~-~~D~~kal~~GAd~V~ig 148 (202)
.+|++++...+.|+|.+-++-+.-...+ + ..-+++.|.++.+.+..++|++.-||=.. .+++.+++..|..=|-++
T Consensus 172 T~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 251 (306)
T 3pm6_A 172 TTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVN 251 (306)
T ss_dssp CCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeC
Confidence 4689999988999998887642111111 1 22367789999888865799999987654 566889999999999999
Q ss_pred HHHHHHh----hh----cCh-HHHHHHHHHHHHHHHHHHHHhCCCC
Q psy16780 149 RPALWGL----AH----SGK-SGVRKVLDILINEFDQALALSGCTS 185 (202)
Q Consensus 149 ~~~l~~~----~~----~G~-~~v~~~i~~l~~~L~~~m~~~G~~~ 185 (202)
+-+-.+. .. ..+ .-+....+.+++.++..|..+|+..
T Consensus 252 Tdl~~a~~~~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~g 297 (306)
T 3pm6_A 252 RAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTG 297 (306)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9654321 11 111 1233445667788888899988754
No 274
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.40 E-value=0.083 Score=44.88 Aligned_cols=86 Identities=16% Similarity=0.120 Sum_probs=63.8
Q ss_pred CccccHHHHHHHHHhcCCCEEEEecc-C---HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEE
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGIL-T---AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~-~---~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipii 123 (202)
+++...+.++++++.++.|+.|.+.. + .+.++.+.+.|+|.|.++. + .| ...+..+++ . .++++
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~--g------~p-~~~~~~l~~-~--g~~v~ 128 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGA--G------NP-TKYIRELKE-N--GTKVI 128 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEES--S------CC-HHHHHHHHH-T--TCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECC--C------Cc-HHHHHHHHH-c--CCcEE
Confidence 55556678888888888899988653 2 4667888999999999843 2 12 334455443 2 57777
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 124 LDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 124 a~GGI~~~~D~~kal~~GAd~V~i 147 (202)
. ++.+.+++.++...|||++.+
T Consensus 129 ~--~v~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 129 P--VVASDSLARMVERAGADAVIA 150 (326)
T ss_dssp E--EESSHHHHHHHHHTTCSCEEE
T ss_pred E--EcCCHHHHHHHHHcCCCEEEE
Confidence 6 578999999999999999988
No 275
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=95.40 E-value=0.09 Score=45.13 Aligned_cols=93 Identities=9% Similarity=0.010 Sum_probs=69.0
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.= . ..+.+++.+.++++.+ +
T Consensus 170 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq-------P-~~~~~~~~~~~l~~~~--~ 239 (370)
T 1nu5_A 170 TPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVEQ-------P-VPRANFGALRRLTEQN--G 239 (370)
T ss_dssp CHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEEC-------C-SCTTCHHHHHHHHHHC--S
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceEeC-------C-CCcccHHHHHHHHHhC--C
Confidence 3455677899999876 578888753 45444 46677888887641 0 1123567778887776 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
+||++++.+.+..|+.+++..| +|.|++--.
T Consensus 240 ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (370)
T 1nu5_A 240 VAILADESLSSLSSAFELARDHAVDAFSLKLC 271 (370)
T ss_dssp SEEEESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CCEEeCCCCCCHHHHHHHHHhCCCCEEEEchh
Confidence 9999999999999999999987 899999653
No 276
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=95.36 E-value=0.05 Score=47.55 Aligned_cols=68 Identities=18% Similarity=0.277 Sum_probs=50.4
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.+.++.+.++|+|+|.+....|. ....++.+..+++.++ ++||++ |++.+.+++.++..+|||++.+|
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~----~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGH----STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCCCC----hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 56678889999999998432221 1224556677777653 689987 67889999999999999999983
No 277
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=95.34 E-value=0.55 Score=39.42 Aligned_cols=110 Identities=14% Similarity=0.102 Sum_probs=73.9
Q ss_pred cCHHHHHHHH-HcCCcEEEeeccCcCCCCCcc--chHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHHhCCCEEEEc
Q psy16780 73 LTAEDAKIGV-EMGASAIMVSNHGGRQLDYVP--ASIEALPEIAKAVGHKVDVYLDGGVRY-GTDVFKALALGAKMVFVG 148 (202)
Q Consensus 73 ~~~~~a~~l~-~aG~d~I~v~~~gg~~~~~~~--~~~~~l~~i~~~~~~~ipiia~GGI~~-~~D~~kal~~GAd~V~ig 148 (202)
.+|++++... +.|+|.+-++-+.-...+.+. -+++.|.++++.+ .+|++.-||=.. .+++.+++..|..=|-++
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 236 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKINVN 236 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEC
Confidence 4688988876 699999988642111122222 3677899999888 699999887544 466889999999999999
Q ss_pred HHHHHHhh-------hc-----Ch-HHHHHHHHHHHHHHHHHHHHhCCC
Q psy16780 149 RPALWGLA-------HS-----GK-SGVRKVLDILINEFDQALALSGCT 184 (202)
Q Consensus 149 ~~~l~~~~-------~~-----G~-~~v~~~i~~l~~~L~~~m~~~G~~ 184 (202)
+-+-.+.. .. .+ .-+....+.+++.++..|..+|+.
T Consensus 237 Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 285 (288)
T 3q94_A 237 TENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSN 285 (288)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred hHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 96543211 01 11 223344456777777788877764
No 278
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=95.29 E-value=0.072 Score=44.95 Aligned_cols=68 Identities=18% Similarity=0.095 Sum_probs=49.9
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCC--CC-HHHHHHHHHhCCCEEEEcHHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGV--RY-GTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI--~~-~~D~~kal~~GAd~V~ig~~~l 152 (202)
+.++.+.++|||.|.+-+ .++.+.+.++.+.+ ++|++++.-. .+ .....+.-++|.+.|.++...+
T Consensus 171 ~ra~ay~eAGAd~i~~e~---------~~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 171 ERAQAYVEAGAEMLFPEA---------ITELAMYRQFADAV--QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAF 239 (295)
T ss_dssp HHHHHHHHTTCSEEEETT---------CCSHHHHHHHHHHH--CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHH
T ss_pred HHHHHHHHcCCCEEEEeC---------CCCHHHHHHHHHHc--CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHH
Confidence 456788999999999843 34677788888888 7999875432 22 2334455568999999999887
Q ss_pred HH
Q psy16780 153 WG 154 (202)
Q Consensus 153 ~~ 154 (202)
++
T Consensus 240 ~a 241 (295)
T 1xg4_A 240 RA 241 (295)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 279
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=95.27 E-value=0.052 Score=47.28 Aligned_cols=92 Identities=11% Similarity=0.061 Sum_probs=69.1
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHH-HHhCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIA-KAVGH 118 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~-~~~~~ 118 (202)
+++...+.++++|+.+ ++|+.+... .+.++ ++.+.+.|++.|.=- . .+.+++.+.+++ +.+
T Consensus 177 ~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP------~--~~~d~~~~~~l~~~~~-- 246 (389)
T 3ozy_A 177 APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFEEP------L--SIDDIEGHRILRAQGT-- 246 (389)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEESC------S--CTTCHHHHHHHHTTCC--
T ss_pred CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEECC------C--CcccHHHHHHHHhcCC--
Confidence 5566778899999987 688988854 45544 466778898888510 0 122566677776 655
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++||++++.+.+..|+.+++..| +|.|++--
T Consensus 247 ~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~ 278 (389)
T 3ozy_A 247 PVRIATGENLYTRNAFNDYIRNDAIDVLQADA 278 (389)
T ss_dssp SSEEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 79999999999999999999986 89998854
No 280
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.22 E-value=0.23 Score=41.69 Aligned_cols=103 Identities=14% Similarity=0.223 Sum_probs=68.3
Q ss_pred hccCccccHHHHHHHHHhcCCCEEEEec-------cC-------HHHHHHHHHcCCcEEEeec--cCcC-----------
Q psy16780 45 SQLDETINWSDVTWLKTITKLPIVLKGI-------LT-------AEDAKIGVEMGASAIMVSN--HGGR----------- 97 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~~~Pv~vK~~-------~~-------~~~a~~l~~aG~d~I~v~~--~gg~----------- 97 (202)
.+|-...+...++.+++.+++||.+=++ .+ .++++.+.++|+|+|+++- ..|+
T Consensus 70 ~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~ 149 (287)
T 3iwp_A 70 SEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMA 149 (287)
T ss_dssp GGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHH
Confidence 3555556778999999988999877443 12 2568889999999999973 1111
Q ss_pred -----------CC-----------------------CCcc----chHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHH
Q psy16780 98 -----------QL-----------------------DYVP----ASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALA 139 (202)
Q Consensus 98 -----------~~-----------------------~~~~----~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~ 139 (202)
.+ .++. ..++.|+++.+..+++++|++.|||+. +.+.+.++
T Consensus 150 ~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~-~Ni~~l~~ 228 (287)
T 3iwp_A 150 ICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITD-RNLQRILE 228 (287)
T ss_dssp HHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCCT-TTHHHHHH
T ss_pred HcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCChHHhHHHHHHHHHHhCCCCEEEECCCcCH-HHHHHHHH
Confidence 00 1111 234456666666666899999999864 55666665
Q ss_pred -hCCCEEEEc
Q psy16780 140 -LGAKMVFVG 148 (202)
Q Consensus 140 -~GAd~V~ig 148 (202)
+|++.+=..
T Consensus 229 ~tG~~~~H~S 238 (287)
T 3iwp_A 229 GSGATEFHCS 238 (287)
T ss_dssp HHCCSEEEEC
T ss_pred hhCCCEEeEC
Confidence 898877554
No 281
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=95.20 E-value=0.33 Score=37.82 Aligned_cols=87 Identities=24% Similarity=0.182 Sum_probs=52.9
Q ss_pred HHHHHHHHHhc-CCCEEE--EeccC-HHH-HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE-EEec
Q psy16780 53 WSDVTWLKTIT-KLPIVL--KGILT-AED-AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV-YLDG 126 (202)
Q Consensus 53 ~~~i~~i~~~~-~~Pv~v--K~~~~-~~~-a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi-ia~G 126 (202)
.+.++++++.+ +.|+++ |. .+ ++. ++.+.++|+|+|+++...+ ......+.+..+.. ..++ +..-
T Consensus 41 ~~~i~~l~~~~~~~~i~~~l~~-~di~~~~~~~a~~~Gad~v~vh~~~~------~~~~~~~~~~~~~~--g~~~gv~~~ 111 (207)
T 3ajx_A 41 LSVITAVKKAHPDKIVFADMKT-MDAGELEADIAFKAGADLVTVLGSAD------DSTIAGAVKAAQAH--NKGVVVDLI 111 (207)
T ss_dssp THHHHHHHHHSTTSEEEEEEEE-CSCHHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHH--TCEEEEECT
T ss_pred HHHHHHHHHhCCCCeEEEEEEe-cCccHHHHHHHHhCCCCEEEEeccCC------hHHHHHHHHHHHHc--CCceEEEEe
Confidence 45899999887 789886 74 45 655 8999999999999865322 11222222222222 3444 2122
Q ss_pred CCCCHHHHH-HHHHhCCCEEEEc
Q psy16780 127 GVRYGTDVF-KALALGAKMVFVG 148 (202)
Q Consensus 127 GI~~~~D~~-kal~~GAd~V~ig 148 (202)
...++.+.. .+...|+|.|.+.
T Consensus 112 s~~~p~~~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 112 GIEDKATRAQEVRALGAKFVEMH 134 (207)
T ss_dssp TCSSHHHHHHHHHHTTCSEEEEE
T ss_pred cCCChHHHHHHHHHhCCCEEEEE
Confidence 334667644 4445799998554
No 282
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.12 E-value=0.15 Score=43.25 Aligned_cols=68 Identities=22% Similarity=0.122 Sum_probs=48.8
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEe---cCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLD---GGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~---GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
+.++.+.++|||.|.+-+ .++.+.+.++.+.+ ++|++++ +|-.-.-...+.-++|.+.|.++...+
T Consensus 179 ~Ra~ay~eAGAD~i~~e~---------~~~~~~~~~i~~~~--~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 179 ERANAYVKAGADAIFPEA---------LQSEEEFRLFNSKV--NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSL 247 (305)
T ss_dssp HHHHHHHHHTCSEEEETT---------CCSHHHHHHHHHHS--CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEcC---------CCCHHHHHHHHHHc--CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHH
Confidence 446778999999999843 34667788888888 6888753 442222335556678999999998777
Q ss_pred HH
Q psy16780 153 WG 154 (202)
Q Consensus 153 ~~ 154 (202)
++
T Consensus 248 ra 249 (305)
T 3ih1_A 248 RV 249 (305)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 283
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.12 E-value=0.43 Score=37.20 Aligned_cols=89 Identities=17% Similarity=0.082 Sum_probs=57.1
Q ss_pred cHHHHHHHHHh-cCCCEEEEe--ccCHHH-HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEe-c
Q psy16780 52 NWSDVTWLKTI-TKLPIVLKG--ILTAED-AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLD-G 126 (202)
Q Consensus 52 ~~~~i~~i~~~-~~~Pv~vK~--~~~~~~-a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~-G 126 (202)
..+.++++|+. .+.||.+-. ....+. ++.+.++|+|+|++....+ ...+..+.+..+.. .++++.+ -
T Consensus 40 g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~------~~~~~~~~~~~~~~--g~~~~v~~~ 111 (211)
T 3f4w_A 40 GVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTD------VLTIQSCIRAAKEA--GKQVVVDMI 111 (211)
T ss_dssp TTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHH--TCEEEEECT
T ss_pred cHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCC------hhHHHHHHHHHHHc--CCeEEEEec
Confidence 35789999988 488987533 334555 8999999999999954321 12223222222333 4566543 4
Q ss_pred CCCCH-HHHHHHHHhCCCEEEEc
Q psy16780 127 GVRYG-TDVFKALALGAKMVFVG 148 (202)
Q Consensus 127 GI~~~-~D~~kal~~GAd~V~ig 148 (202)
+..++ +.+.++..+|+|.|.+.
T Consensus 112 ~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 112 CVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp TCSSHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCHHHHHHHHHHcCCCEEEEc
Confidence 45666 44677778999998875
No 284
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=95.12 E-value=0.046 Score=47.01 Aligned_cols=93 Identities=11% Similarity=0.115 Sum_probs=67.0
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHHH-----HHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDAK-----IGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a~-----~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
+++...+.++.+|+.+ ++|+.+... .+.+++. .+.+.|++.+.= . ..+.+++.+.++++.+
T Consensus 167 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iEq-------P-~~~~d~~~~~~l~~~~-- 236 (369)
T 2p8b_A 167 NVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNIDWIEQ-------P-VIADDIDAMAHIRSKT-- 236 (369)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEEC-------C-BCTTCHHHHHHHHHTC--
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEC-------C-CCcccHHHHHHHHHhC--
Confidence 4566678999999987 688888753 3444443 344566665531 0 1123567778887766
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
++||++++.+.+..++.+++..| +|+|++-..
T Consensus 237 ~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 237 DLPLMIDEGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp CSCEEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecc
Confidence 79999999999999999999986 899999654
No 285
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=95.09 E-value=0.098 Score=45.64 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=70.1
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.= .. .+.+++.+.++++.. .
T Consensus 173 ~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq------P~--~~~d~~~~~~l~~~~--~ 242 (393)
T 4dwd_A 173 DIPGDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGYSWFEE------PV--QHYHVGAMGEVAQRL--D 242 (393)
T ss_dssp CHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTCSEEEC------CS--CTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC------CC--CcccHHHHHHHHhhC--C
Confidence 4566778899999986 689998854 45544 46677888888752 00 122566778887776 8
Q ss_pred cEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
+||+++..+.+..|+.+++..|+|.|++--
T Consensus 243 iPIa~dE~~~~~~~~~~~i~~~~d~v~~k~ 272 (393)
T 4dwd_A 243 ITVSAGEQTYTLQALKDLILSGVRMVQPDI 272 (393)
T ss_dssp SEEEBCTTCCSHHHHHHHHHHTCCEECCCT
T ss_pred CCEEecCCcCCHHHHHHHHHcCCCEEEeCc
Confidence 999999999999999999998899998843
No 286
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=95.06 E-value=0.33 Score=40.63 Aligned_cols=90 Identities=22% Similarity=0.193 Sum_probs=60.0
Q ss_pred cHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeecc---CcCCCCC--ccchHHHHHHHHHHhCCCcEEEEec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNH---GGRQLDY--VPASIEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~---gg~~~~~--~~~~~~~l~~i~~~~~~~ipiia~G 126 (202)
++.+.+.+.+..+.++++ .....+.++.+.++|+|+|.+-+. -.+...+ .....+.+.++++.+ ++|+++
T Consensus 9 ~~~~~~~~~~~~~~g~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~--~iPv~~-- 83 (305)
T 2nv1_A 9 TERVKRGMAEMQKGGVIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV--SIPVMA-- 83 (305)
T ss_dssp CHHHHHHHHHTTTTCEEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC--SSCEEE--
T ss_pred cHHHHHHHHHHccCCeee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC--CCCEEe--
Confidence 345555566667778887 556789999999999999943220 0000011 123566777887766 799985
Q ss_pred CCCC--HHHHHHHHHhCCCEEE
Q psy16780 127 GVRY--GTDVFKALALGAKMVF 146 (202)
Q Consensus 127 GI~~--~~D~~kal~~GAd~V~ 146 (202)
+++. .+++..++++|||+|.
T Consensus 84 k~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 84 KARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp EECTTCHHHHHHHHHHTCSEEE
T ss_pred cccccchHHHHHHHHCCCCEEE
Confidence 4444 6777777889999996
No 287
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.01 E-value=0.19 Score=40.75 Aligned_cols=91 Identities=18% Similarity=0.183 Sum_probs=59.4
Q ss_pred cHHHHHHHHHhcCCCEEEEec-c-----C-HHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-L-----T-AEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~-----~-~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
+.+.++.+++.+++|++ |-. . . .+++ ..+....+|++.++..||+.. .-+|+.+..+.. +.
T Consensus 103 ~~~~~~~l~~~~~~~vi-Ka~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~---~fDW~~~~~~~~----~~ 174 (228)
T 4aaj_A 103 LPQTIDTLKKEFGVFVM-KAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSGK---LHDLRVSSLVAR----KI 174 (228)
T ss_dssp CHHHHHHHHHHHCCEEE-EEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC----------CCCHHHHHHHH----HS
T ss_pred CHHHHHHHhhccCceEE-EEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCcC---cCChHHHHHhhh----cC
Confidence 45688889888888887 432 1 1 2222 334556799999987666531 224555555432 57
Q ss_pred EEEEecCCCCHHHHHHHHH-hCCCEEEEcHHH
Q psy16780 121 DVYLDGGVRYGTDVFKALA-LGAKMVFVGRPA 151 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~-~GAd~V~ig~~~ 151 (202)
|++.+||+ +++.+.+|+. .+..+|=+.|.+
T Consensus 175 p~iLAGGL-~peNV~~Ai~~~~P~gVDVsSGV 205 (228)
T 4aaj_A 175 PVIVAGGL-NAENVEEVIKVVKPYGVDVSSGV 205 (228)
T ss_dssp CEEEESSC-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred CeEEECCC-CHHHHHHHHHHhCCCEEEeCCCC
Confidence 99999998 6788989887 699999998855
No 288
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=95.01 E-value=0.31 Score=49.24 Aligned_cols=119 Identities=9% Similarity=0.055 Sum_probs=82.5
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh-----CCCcEEEE-ecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV-----GHKVDVYL-DGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~-----~~~ipiia-~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
+.|..+++.|+..+++|-++-..-....|.+-++..+.+++ +.++-++. +|-+|+.-+++-.+-.||++|-=--
T Consensus 591 ~~a~~av~~g~~iliLsDr~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyl 670 (1479)
T 1ea0_A 591 QETEDAVRGGATHVILTDEAMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYL 670 (1479)
T ss_dssp HHHHHHHHHTCCEEEEECTTCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEECHH
T ss_pred HHHHHHHHCCCcEEEECCCCCCCCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCccccCHHH
Confidence 45677888999999998753211011123444455554443 34577777 7889999999999999999997322
Q ss_pred HH--HHHhhhcC-------hHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccc
Q psy16780 150 PA--LWGLAHSG-------KSGVRKVLDILINEFDQALALSGCTSVGEIQREMV 194 (202)
Q Consensus 150 ~~--l~~~~~~G-------~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~ 194 (202)
+| +..+...| .+.+.++++.+.++|...|..+|.++++.-++..+
T Consensus 671 a~e~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqi 724 (1479)
T 1ea0_A 671 AQEAIAERHRRGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGN 724 (1479)
T ss_dssp HHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCcee
Confidence 22 11222223 35789999999999999999999999998877643
No 289
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=94.98 E-value=0.084 Score=44.39 Aligned_cols=72 Identities=22% Similarity=0.244 Sum_probs=53.2
Q ss_pred cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEe-----cCCCCH--------HHHHHHHH
Q psy16780 73 LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLD-----GGVRYG--------TDVFKALA 139 (202)
Q Consensus 73 ~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~-----GGI~~~--------~D~~kal~ 139 (202)
.+.+.+..+.++|||.|.+...- ...+..|+...+..+++.+ ++||... |++... +|+..+.+
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~l--~~GGlTPS~g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSGL--SEGGTTPSMGVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBCG--GGTCBCCCHHHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCC--CCCCCCCCHHHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 78999999999999999997531 1112245666777776655 6888874 333333 68989999
Q ss_pred hCCCEEEEc
Q psy16780 140 LGAKMVFVG 148 (202)
Q Consensus 140 ~GAd~V~ig 148 (202)
+|||+|.+|
T Consensus 123 ~GAdGvVfG 131 (287)
T 3iwp_A 123 YGADGLVFG 131 (287)
T ss_dssp TTCSEEEEC
T ss_pred cCCCEEEEe
Confidence 999999999
No 290
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=94.96 E-value=0.63 Score=38.99 Aligned_cols=110 Identities=19% Similarity=0.199 Sum_probs=74.4
Q ss_pred cCHHHHHHHH-HcCCcEEEeeccCcCCCCCccc--hHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHHhCCCEEEEc
Q psy16780 73 LTAEDAKIGV-EMGASAIMVSNHGGRQLDYVPA--SIEALPEIAKAVGHKVDVYLDGGVRY-GTDVFKALALGAKMVFVG 148 (202)
Q Consensus 73 ~~~~~a~~l~-~aG~d~I~v~~~gg~~~~~~~~--~~~~l~~i~~~~~~~ipiia~GGI~~-~~D~~kal~~GAd~V~ig 148 (202)
.+|++++... +.|+|.+-++-+.-...+.+.| +++.|.++++.+ ++|++.-||=.. .+++.+++..|..=|-++
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 232 (286)
T 1gvf_A 155 TDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKVNVA 232 (286)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCHHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHHCCCeEEEEC
Confidence 4588888776 7999999886432112222333 667899998887 799999886544 566889999999999999
Q ss_pred HHHHHHh----h---hcC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q psy16780 149 RPALWGL----A---HSG-----K-SGVRKVLDILINEFDQALALSGCT 184 (202)
Q Consensus 149 ~~~l~~~----~---~~G-----~-~~v~~~i~~l~~~L~~~m~~~G~~ 184 (202)
|-+-.+. . ... + .-+....+.+++.++..|..+|+.
T Consensus 233 Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 281 (286)
T 1gvf_A 233 TELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSA 281 (286)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred hHHHHHHHHHHHHHHHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9654331 1 111 1 113334456777788888888764
No 291
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=94.95 E-value=0.14 Score=43.82 Aligned_cols=93 Identities=12% Similarity=0.166 Sum_probs=69.4
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHH--cCCcEEEeeccCcCCCCCccchHHHHHHHHHHhC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVE--MGASAIMVSNHGGRQLDYVPASIEALPEIAKAVG 117 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~--aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~ 117 (202)
+++...+.++.+|+.+ ++++.+... .+.++ ++.+.+ .|++.|. +. ..+.+++.+.++++.+
T Consensus 167 ~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~- 237 (366)
T 1tkk_A 167 DIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVE-------QP-VHKDDLAGLKKVTDAT- 237 (366)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEE-------CC-SCTTCHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEE-------CC-CCcccHHHHHHHHhhC-
Confidence 5566778999999987 688888753 45544 456677 7777664 10 1123667778887776
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
++||++++.+.+..|+.+++..| +|.|++--.
T Consensus 238 -~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 238 -DTPIMADESVFTPRQAFEVLQTRSADLINIKLM 270 (366)
T ss_dssp -SSCEEECTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred -CCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehh
Confidence 79999999999999999999986 899998653
No 292
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=94.93 E-value=0.087 Score=45.89 Aligned_cols=92 Identities=10% Similarity=0.037 Sum_probs=68.7
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++.+|+.+ ++++.+... .+.++ ++.+.+.|++.|.=- ..+.+++.+.++++.+ +
T Consensus 202 ~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~ 271 (398)
T 2pp0_A 202 NCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEP--------LDAYDIEGHAQLAAAL--D 271 (398)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCEECC--------SCTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCceeeCC--------CChhhHHHHHHHHhhC--C
Confidence 4555678999999986 689988754 45544 455667787766410 0123567778887777 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||++++.+.+..++.+++..| +|+|++--
T Consensus 272 iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 302 (398)
T 2pp0_A 272 TPIATGEMLTSFREHEQLILGNASDFVQPDA 302 (398)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CCEEecCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999999987 89998854
No 293
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=94.91 E-value=0.059 Score=47.27 Aligned_cols=86 Identities=8% Similarity=-0.038 Sum_probs=66.7
Q ss_pred cHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEE
Q psy16780 52 NWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipii 123 (202)
..+.++++|+.+ ++|+.+... .+.++ ++.+.+.|++.|..- ..+++.+.++++.+ .+||+
T Consensus 199 ~~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P----------~~d~~~~~~l~~~~--~iPIa 266 (409)
T 3go2_A 199 LRAHLEALRDGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVEID----------SYSPQGLAYVRNHS--PHPIS 266 (409)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECC----------CSCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEeC----------cCCHHHHHHHHhhC--CCCEE
Confidence 467899999986 688998754 45555 455667888888741 13566778887766 79999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 124 LDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 124 a~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+++.+.+..++.+++..| +|.|++--
T Consensus 267 ~dE~~~~~~~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 267 SCETLFGIREFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEEEECH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEeCC
Confidence 999999999999999987 79998854
No 294
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=94.84 E-value=0.2 Score=42.43 Aligned_cols=86 Identities=15% Similarity=0.210 Sum_probs=63.1
Q ss_pred CccccHHHHHHHHHhcCCCEEEEecc-C---HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEE
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGIL-T---AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~~-~---~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipii 123 (202)
+++...+.++++++.++.|+.+.... + .+.++.+.++|+|+|.++. |. + .+.+..+++ . .+||+
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~--g~-----p--~~~i~~l~~-~--g~~v~ 114 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGA--GN-----P--SKYMERFHE-A--GIIVI 114 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECS--SC-----G--GGTHHHHHH-T--TCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECC--CC-----h--HHHHHHHHH-c--CCeEE
Confidence 55555667888888888899888653 3 3567889999999999854 21 1 234455543 2 58888
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 124 LDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 124 a~GGI~~~~D~~kal~~GAd~V~i 147 (202)
.. +.+.+++.++...|+|++.+
T Consensus 115 ~~--v~~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 115 PV--VPSVALAKRMEKIGADAVIA 136 (332)
T ss_dssp EE--ESSHHHHHHHHHTTCSCEEE
T ss_pred EE--eCCHHHHHHHHHcCCCEEEE
Confidence 64 68899998888999999988
No 295
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=94.82 E-value=0.14 Score=42.23 Aligned_cols=73 Identities=21% Similarity=0.221 Sum_probs=53.4
Q ss_pred cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEE-----ecCCCCH--------HHHHHHHH
Q psy16780 73 LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYL-----DGGVRYG--------TDVFKALA 139 (202)
Q Consensus 73 ~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia-----~GGI~~~--------~D~~kal~ 139 (202)
.+.+++..+.+.|||.|.+...- ...+..|+...+..+++.+ ++||.+ .|++... +|+..+..
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L--~~GGlTPS~g~i~~~~~~~--~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~ 84 (256)
T 1twd_A 9 YSMECALTAQQNGADRVELCAAP--KEGGLTPSLGVLKSVRQRV--TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRE 84 (256)
T ss_dssp SSHHHHHHHHHTTCSEEEECBCG--GGTCBCCCHHHHHHHHHHC--CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCc--ccCCCCCCHHHHHHHHHHc--CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 68999999999999999997631 1112246677777777776 788887 4555433 36666777
Q ss_pred hCCCEEEEcH
Q psy16780 140 LGAKMVFVGR 149 (202)
Q Consensus 140 ~GAd~V~ig~ 149 (202)
+|||+|.+|-
T Consensus 85 ~GadGvV~G~ 94 (256)
T 1twd_A 85 LGFPGLVTGV 94 (256)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEEee
Confidence 9999999995
No 296
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=94.82 E-value=0.19 Score=44.04 Aligned_cols=94 Identities=22% Similarity=0.118 Sum_probs=59.9
Q ss_pred HHHHHHHHHhcC--CCEEEEeccC----HHHHHHHHHc--CCcEEEeeccCcCCCCCccchHHHHHHHHHHh---C-CCc
Q psy16780 53 WSDVTWLKTITK--LPIVLKGILT----AEDAKIGVEM--GASAIMVSNHGGRQLDYVPASIEALPEIAKAV---G-HKV 120 (202)
Q Consensus 53 ~~~i~~i~~~~~--~Pv~vK~~~~----~~~a~~l~~a--G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~---~-~~i 120 (202)
.+.++..++.++ .|+++ ++-| .+.+-.+.+. |+|+|.+++...+. + ...+...++++.+ + +++
T Consensus 197 ~~A~~~~~~~~p~~~~~~v-lvDT~d~~~~~al~~a~~l~~~d~IrlDs~~~~~---g-d~~~~v~~v~~~ld~~G~~~~ 271 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVL-LIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSRR---G-NFEALIREVRWELALRGRSDI 271 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEE-ECCSSSCHHHHHHHHHTTCSCCCEEEECCCGGGC---S-CHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHhCCCCCCEEE-EEcCchHHHHHHHHHHHhhcCCcEEEeCCCCCCc---c-cHHHHHHHHHHHHHhCCCCce
Confidence 567777777764 45554 5533 3334333344 99999998742110 0 1222334443322 1 368
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 121 DVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
.|++|||| +.+.+.+..+.|+|.+++|+.+.
T Consensus 272 ~I~aSggl-~~~~i~~l~~~GvD~~gvGt~l~ 302 (398)
T 2i1o_A 272 KIMVSGGL-DENTVKKLREAGAEAFGVGTSIS 302 (398)
T ss_dssp EEEEESSC-CHHHHHHHHHTTCCEEEECHHHH
T ss_pred EEEEeCCC-CHHHHHHHHHcCCCEEEeCcccC
Confidence 99999998 68888888889999999999776
No 297
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=94.77 E-value=0.084 Score=43.05 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=34.0
Q ss_pred HHHHHHHhCCCcEEEEecCCCCHH----------HHHHHHHhCCCEEEEcHHHHH
Q psy16780 109 LPEIAKAVGHKVDVYLDGGVRYGT----------DVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 109 l~~i~~~~~~~ipiia~GGI~~~~----------D~~kal~~GAd~V~ig~~~l~ 153 (202)
+.++++..+ +.+++.+|||+... .+.+++.+|||.+.+||+++.
T Consensus 173 i~~lr~~~~-~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~ 226 (245)
T 1eix_A 173 AVRFKQVFG-QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQ 226 (245)
T ss_dssp HHHHHHHHC-SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHhcC-CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcC
Confidence 566666554 46899999998531 467788899999999999884
No 298
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.77 E-value=0.091 Score=45.27 Aligned_cols=77 Identities=18% Similarity=0.182 Sum_probs=52.8
Q ss_pred CEEEEeccCH---HHHHHHHHc--CCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHh
Q psy16780 66 PIVLKGILTA---EDAKIGVEM--GASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALAL 140 (202)
Q Consensus 66 Pv~vK~~~~~---~~a~~l~~a--G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~ 140 (202)
++.+....+. +.++.+.+. |++.+.++...|. ....++.+.++++..+ ++||++ |++.+.+++.++..+
T Consensus 108 ~v~~~~g~~~~~~~~~~~l~~~~~g~~~i~i~~~~g~----~~~~~~~i~~lr~~~~-~~~vi~-g~v~t~e~A~~a~~a 181 (351)
T 2c6q_A 108 HLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGY----SEHFVEFVKDVRKRFP-QHTIMA-GNVVTGEMVEELILS 181 (351)
T ss_dssp TEEEEECSSHHHHHHHHHHHHHCTTCCEEEEECSCTT----BHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHT
T ss_pred eeEeecCCChHHHHHHHHHHhccCCCCEEEEEecCCC----cHHHHHHHHHHHHhcC-CCeEEE-EeCCCHHHHHHHHHh
Confidence 4554433333 445666776 9999888643221 1224566777777653 688885 678999999999999
Q ss_pred CCCEEEEc
Q psy16780 141 GAKMVFVG 148 (202)
Q Consensus 141 GAd~V~ig 148 (202)
|||+|.++
T Consensus 182 GaD~I~v~ 189 (351)
T 2c6q_A 182 GADIIKVG 189 (351)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999775
No 299
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=94.76 E-value=0.11 Score=45.26 Aligned_cols=92 Identities=11% Similarity=0.125 Sum_probs=67.9
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++.+|+.+ ++|+.+... .+.++ ++.+.+.|++.|.=- ..+.+++.+.++++.+ +
T Consensus 171 ~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~~~~~~~~l~~~~--~ 240 (397)
T 2qde_A 171 PLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKIEQP--------LPAWDLDGMARLRGKV--A 240 (397)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECC--------SCTTCHHHHHHHHTTC--S
T ss_pred CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCCEEECC--------CChhhHHHHHHHHhhC--C
Confidence 5556678899999986 688988753 45544 455667788776410 0123566777776665 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||++++.+.+..++.+++..| +|.|++--
T Consensus 241 iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 241 TPIYADESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp SCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred CCEEEeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 9999999999999999999986 89999854
No 300
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=94.66 E-value=0.096 Score=45.61 Aligned_cols=92 Identities=9% Similarity=0.011 Sum_probs=67.9
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--c-CHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--L-TAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~-~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
+++...+.++++|+.+ ++|+.+... . +.+++ +.+.+.|++.+.=- . .+.+++.+.++++.+
T Consensus 182 ~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iEeP------~--~~~~~~~~~~l~~~~-- 251 (394)
T 3mqt_A 182 SDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIEAC------L--QHDDLIGHQKLAAAI-- 251 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEESC------S--CTTCHHHHHHHHHHS--
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEECC------C--CcccHHHHHHHHhhC--
Confidence 4555677899999886 678888754 5 66554 45566788877520 0 122566778888776
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++||++++.+.+..|+.+++..| +|.|++--
T Consensus 252 ~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 283 (394)
T 3mqt_A 252 NTRLCGAEMSTTRFEAQEWLEKTGISVVQSDY 283 (394)
T ss_dssp SSEEEECTTCCHHHHHHHHHHHHCCSEECCCT
T ss_pred CCCEEeCCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 89999999999999999999986 89998853
No 301
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=94.66 E-value=0.082 Score=42.86 Aligned_cols=60 Identities=22% Similarity=0.203 Sum_probs=39.7
Q ss_pred HHHHHHHHhCCCcEEEEecCCCCHHH----------HHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHH
Q psy16780 108 ALPEIAKAVGHKVDVYLDGGVRYGTD----------VFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEF 174 (202)
Q Consensus 108 ~l~~i~~~~~~~ipiia~GGI~~~~D----------~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L 174 (202)
.+.++++..+ ..+++.+|||+.... ..+++.+|||.+.+||+++.+ .. ..+.++.+++++
T Consensus 165 ~i~~lr~~~~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a---~d---p~~a~~~l~~~i 234 (239)
T 1dbt_A 165 EAKAIYQAVS-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKA---ED---PVKAYKAVRLEW 234 (239)
T ss_dssp GHHHHTTTSC-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTS---SC---HHHHHHHHHHHH
T ss_pred HHHHHHHhcC-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCC---CC---HHHHHHHHHHHH
Confidence 3445544443 468999999986443 367889999999999998842 22 234455555544
No 302
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=94.61 E-value=0.086 Score=42.97 Aligned_cols=60 Identities=22% Similarity=0.316 Sum_probs=39.9
Q ss_pred HHHHHHHhCCCcEEEEecCCCCH-H---------HHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHH
Q psy16780 109 LPEIAKAVGHKVDVYLDGGVRYG-T---------DVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFD 175 (202)
Q Consensus 109 l~~i~~~~~~~ipiia~GGI~~~-~---------D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~ 175 (202)
+..+++..+. .+++.+|||+.. . .+.+++.+|||.+.+||+++.+ .. ..+.++.++++++
T Consensus 167 i~~lr~~~~~-~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a---~d---p~~a~~~l~~~i~ 236 (246)
T 2yyu_A 167 AAFIKERCGA-SFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRA---AD---PLRTYARLQHEWN 236 (246)
T ss_dssp HHHHHHHHCT-TSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTS---SS---HHHHHHHHHHHCC
T ss_pred HHHHHHhcCC-CCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCC---CC---HHHHHHHHHHHHH
Confidence 5666665543 459999999842 2 3777888999999999998852 22 2344555555443
No 303
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=94.61 E-value=0.12 Score=44.64 Aligned_cols=91 Identities=9% Similarity=0.007 Sum_probs=66.8
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHc-CCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEM-GASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~a-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
+++...+.++.+|+.+ ++++.+... .+.+++ +.+.+. |++.|.= + ..+.+++.+.++++.+
T Consensus 166 ~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~-- 235 (382)
T 2gdq_A 166 SFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLEE---P-----LPFDQPQDYAMLRSRL-- 235 (382)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEEC---C-----SCSSCHHHHHHHHTTC--
T ss_pred CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEEEC---C-----CCcccHHHHHHHHhhC--
Confidence 5566778999999987 688888753 455554 555666 7776641 0 0123566777777665
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
++||++++.+.+..++.+++..| +|.|++-
T Consensus 236 ~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 236 SVPVAGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp SSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 79999999999999999999987 8999873
No 304
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=94.59 E-value=0.085 Score=46.40 Aligned_cols=92 Identities=5% Similarity=-0.045 Sum_probs=69.3
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++++|+.+ ++|+.+... .+.++ ++.+.+.|++.|.=- . .+.+++.+.++++.. .+|
T Consensus 214 ~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEeP------~--~~~d~~~~~~l~~~~--~iP 283 (412)
T 3stp_A 214 RENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEPRWLEEP------V--IADDVAGYAELNAMN--IVP 283 (412)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECC------S--CTTCHHHHHHHHHTC--SSC
T ss_pred HHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC------C--CcccHHHHHHHHhCC--CCC
Confidence 45667899999987 688988754 45554 456677888887520 0 122567778887765 899
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEcHHH
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVGRPA 151 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig~~~ 151 (202)
|++++.+.+..|+.+++..| +|.|++--..
T Consensus 284 Ia~dE~~~~~~~~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 284 ISGGEHEFSVIGCAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEecChhh
Confidence 99999999999999999987 8999986544
No 305
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=94.52 E-value=0.076 Score=46.28 Aligned_cols=89 Identities=7% Similarity=0.006 Sum_probs=66.5
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++.+|+.+ ++++.+... .++++ ++.+.+.|++.+.-- ..+.+++.+.++++.+ ++|
T Consensus 202 ~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~iP 271 (410)
T 2gl5_A 202 KMGEARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEEP--------IHPLNSDNMQKVSRST--TIP 271 (410)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECS--------SCSSCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEECC--------CChhhHHHHHHHHhhC--CCC
Confidence 44667899999986 688888754 45544 455667787766420 0123577788888777 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
|++++.+.+..++.+++..| +|+|++-
T Consensus 272 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 272 IATGERSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp EEECTTCCTTHHHHHHHHTTCCSEECCC
T ss_pred EEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 99999999999999999987 7999873
No 306
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.42 E-value=0.17 Score=42.15 Aligned_cols=92 Identities=14% Similarity=0.083 Sum_probs=52.4
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEecCCCCHHHHH---HHHHhCCCEEEEcHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDGGVRYGTDVF---KALALGAKMVFVGRPA 151 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~GGI~~~~D~~---kal~~GAd~V~ig~~~ 151 (202)
..++.+++.|+|++.+.|+.|....-.... .+.++.+++.+.+ -|.+.|+..+.+-+. .+-.+|||++++-.|+
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 100 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPPY 100 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 446778899999999987655322111111 2234455555544 344466554444332 2334799999999998
Q ss_pred HHHhhhcChHHHHHHHHHHH
Q psy16780 152 LWGLAHSGKSGVRKVLDILI 171 (202)
Q Consensus 152 l~~~~~~G~~~v~~~i~~l~ 171 (202)
++. .-..+++.++++.+.
T Consensus 101 y~~--~~s~~~l~~~f~~va 118 (286)
T 2r91_A 101 YFP--RLSERQIAKYFRDLC 118 (286)
T ss_dssp SST--TCCHHHHHHHHHHHH
T ss_pred CCC--CCCHHHHHHHHHHHH
Confidence 752 013455555544443
No 307
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=94.40 E-value=0.08 Score=45.53 Aligned_cols=90 Identities=12% Similarity=0.056 Sum_probs=65.8
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHH-HHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIG-VEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l-~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
+++...+.++.+|+.+ ++|+.+... .+.+++ +.+ .+.|+ .|.= ..++++.+.++++.+
T Consensus 172 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE~----------P~~~~~~~~~l~~~~-- 238 (371)
T 2ps2_A 172 EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-ALEA----------PCATWRECISLRRKT-- 238 (371)
T ss_dssp CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEEC----------CBSSHHHHHHHHTTC--
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCcC----------CcCCHHHHHHHHhhC--
Confidence 4556678999999887 688888754 455554 444 55566 5421 112566777777665
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
++||++++.+.+..++.+++..| +|+|++--.
T Consensus 239 ~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (371)
T 2ps2_A 239 DIPIIYDELATNEMSIVKILADDAAEGIDLKIS 271 (371)
T ss_dssp CSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHH
T ss_pred CCCEEeCCCcCCHHHHHHHHHhCCCCEEEechh
Confidence 79999999999999999999987 899998653
No 308
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=94.30 E-value=0.5 Score=40.55 Aligned_cols=88 Identities=10% Similarity=0.118 Sum_probs=62.0
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEecc--C-------------------------------------HHHHHHHHHcCCc
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGIL--T-------------------------------------AEDAKIGVEMGAS 87 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~--~-------------------------------------~~~a~~l~~aG~d 87 (202)
.+++...+.++++++.++.|+.|.+.. . .+.++.+.+.|+|
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVP 124 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCC
Confidence 345555667888888777787776431 0 3446778899999
Q ss_pred EEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 88 AIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 88 ~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~i 147 (202)
.|.++. | .++.+.+..+++ . .++|+. .+.+.+++.++...|+|++.+
T Consensus 125 ~V~~~~--g------~~~~~~i~~~~~-~--g~~v~~--~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 125 VVSFHF--G------VPDREVIARLRR-A--GTLTLV--TATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp EEEEES--S------CCCHHHHHHHHH-T--TCEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred EEEEeC--C------CCcHHHHHHHHH-C--CCeEEE--ECCCHHHHHHHHHcCCCEEEE
Confidence 998843 2 234455666654 2 577776 478999999999999999988
No 309
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=94.30 E-value=0.12 Score=45.04 Aligned_cols=92 Identities=3% Similarity=-0.057 Sum_probs=67.7
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--c-CHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--L-TAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~-~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
+++...+.++++|+.+ ++++.+... . +.+++ +.+.+.|++.+.-- ..+.+++.+.++++.+
T Consensus 187 ~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEeP--------~~~~d~~~~~~l~~~~-- 256 (394)
T 3mkc_A 187 STKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELYFAEAT--------LQHDDLSGHAKLVENT-- 256 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEESC--------SCTTCHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEECC--------CCchhHHHHHHHHhhC--
Confidence 4455667899999887 678888753 5 66554 55566788777520 0122566778887776
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++||++++.+.+..|+.+++..| +|.|++--
T Consensus 257 ~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 288 (394)
T 3mkc_A 257 RSRICGAEMSTTRFEAEEWITKGKVHLLQSDY 288 (394)
T ss_dssp SSCBEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred CCCEEeCCCCCCHHHHHHHHHcCCCCeEecCc
Confidence 79999999999999999999987 89998843
No 310
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=94.29 E-value=0.33 Score=40.85 Aligned_cols=71 Identities=21% Similarity=0.168 Sum_probs=49.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
+.++.+.++|||.|.+-. +.++.+.+.++.+.+...+|++++-+-....++.+.-++|...|.++...+++
T Consensus 174 ~Ra~ay~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 174 KRAEAYRNAGADAILMHS--------KKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp HHHHHHHHTTCSEEEECC--------CSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHHHHHHHcCCCEEEEcC--------CCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 446788999999999842 13455677788888855599998633111123556667899999999887764
No 311
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=94.29 E-value=0.18 Score=43.57 Aligned_cols=91 Identities=12% Similarity=0.068 Sum_probs=65.9
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.++.. .+.+++ +.+.+.|+ .|. + ..++++.+.++++.. +
T Consensus 171 ~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------q---P~~~~~~~~~l~~~~--~ 237 (378)
T 3eez_A 171 DVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MFE-------Q---PGETLDDIAAIRPLH--S 237 (378)
T ss_dssp CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CEE-------C---CSSSHHHHHHTGGGC--C
T ss_pred CHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EEe-------c---CCCCHHHHHHHHhhC--C
Confidence 4556677899999887 678888854 455554 44555665 442 1 112566666666655 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGRPA 151 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~ 151 (202)
+||++++.+.+..|+.+++..| +|.|++-...
T Consensus 238 iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 238 APVSVDECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp CCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred CCEEECCCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 9999999999999999999986 8999997654
No 312
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=94.28 E-value=0.18 Score=43.21 Aligned_cols=94 Identities=12% Similarity=0.131 Sum_probs=66.1
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.+++ +.+.+.|++.|.= + ..+.+++.+.++++.. .
T Consensus 165 ~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~--~ 234 (354)
T 3jva_A 165 GIEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELVEQ---P-----VKRRDLEGLKYVTSQV--N 234 (354)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEEEC---C-----SCTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C-----CChhhHHHHHHHHHhC--C
Confidence 4445567888888876 578887753 455554 4445566666541 0 0122566777887776 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGRPA 151 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~ 151 (202)
+||++++.+.+..|+.+++..| +|.|++--..
T Consensus 235 iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~ 267 (354)
T 3jva_A 235 TTIMADESCFDAQDALELVKKGTVDVINIKLMK 267 (354)
T ss_dssp SEEEESTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCEEEcCCcCCHHHHHHHHHcCCCCEEEECchh
Confidence 9999999999999999999986 7999987543
No 313
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=94.28 E-value=0.15 Score=44.06 Aligned_cols=93 Identities=10% Similarity=0.067 Sum_probs=69.2
Q ss_pred cCccccHHHHHHHHHhc--CCCEEEEec--cC-HHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhC
Q psy16780 47 LDETINWSDVTWLKTIT--KLPIVLKGI--LT-AEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVG 117 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~-~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~ 117 (202)
++++...+.++++|+.+ ++|+.+... .+ .+++ +.+.+.|++.|.= + . .+.+++.+.++++..
T Consensus 174 ~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iEq---P---~--~~~~~~~~~~l~~~~- 244 (374)
T 3sjn_A 174 DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIEE---P---V--LADSLISYEKLSRQV- 244 (374)
T ss_dssp SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEEC---S---S--CTTCHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEEEC---C---C--CcccHHHHHHHHhhC-
Confidence 36677788999999986 678988854 56 6664 4455677777741 0 0 122567778887776
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
.+||++++.+.+..|+.+++..| +|.|++--
T Consensus 245 -~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 245 -SQKIAGGESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp -SSEEEECTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred -CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 89999999999999999999875 89988743
No 314
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=94.27 E-value=0.099 Score=46.25 Aligned_cols=91 Identities=12% Similarity=0.114 Sum_probs=68.4
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.=- ..+.+++.+.++++.. .+|
T Consensus 187 ~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEeP--------~~~~~~~~~~~l~~~~--~iP 256 (433)
T 3rcy_A 187 SLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEP--------VPPDNVGAMAQVARAV--RIP 256 (433)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHHHS--SSC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEECC--------CChhhHHHHHHHHhcc--CCC
Confidence 44667899999987 678888743 45555 456677888887521 0122567788888776 899
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
|++++.+.+..|+.+++..| +|.|++--.
T Consensus 257 Ia~dE~~~~~~~~~~~l~~g~~D~v~~d~~ 286 (433)
T 3rcy_A 257 VATGERLTTKAEFAPVLREGAAAILQPALG 286 (433)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred EEecCCCCCHHHHHHHHHcCCCCEEEeCch
Confidence 99999999999999999987 899988653
No 315
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=94.22 E-value=0.079 Score=45.95 Aligned_cols=90 Identities=12% Similarity=0.126 Sum_probs=66.5
Q ss_pred ccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 49 ETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
++...+.++.+|+.+ ++++.+... .+.++ ++.+.+.|++.|.- + ..+.+++.+.++++.+ ++
T Consensus 182 ~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~---P-----~~~~~~~~~~~l~~~~--~i 251 (392)
T 2poz_A 182 IELAYRRVKAVRDAAGPEIELMVDLSGGLTTDETIRFCRKIGELDICFVEE---P-----CDPFDNGALKVISEQI--PL 251 (392)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC---C-----SCTTCHHHHHHHHHHC--SS
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C-----CCcccHHHHHHHHhhC--CC
Confidence 345667899999986 688888754 45544 45566777776641 0 0123567778887776 79
Q ss_pred EEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 121 DVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
||++++.+.+..++.+++..| +|+|++-
T Consensus 252 pIa~dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 252 PIAVGERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp CEEECTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred CEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999999987 8999873
No 316
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=94.20 E-value=0.087 Score=45.87 Aligned_cols=89 Identities=9% Similarity=0.130 Sum_probs=66.7
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++.+|+.+ ++++.+..- .+.++ ++.+.+.|++.+.=- ..+.+++.+.++++.+ ++|
T Consensus 199 ~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~iP 268 (407)
T 2o56_A 199 RLGYDRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEEP--------VMPLNPAQMKQVADKV--NIP 268 (407)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEECS--------SCSSSHHHHHHHHHHC--CSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCC--------CChhhHHHHHHHHHhC--CCC
Confidence 44667899999986 688988753 45544 455667788776410 0123577788888777 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
|++++.+.+..++.+++..| +|+|++-
T Consensus 269 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 269 LAAGERIYWRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 99999999999999999987 8999873
No 317
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=94.18 E-value=0.071 Score=44.76 Aligned_cols=45 Identities=11% Similarity=0.128 Sum_probs=39.4
Q ss_pred ccccHHHHHHHHHhc--CCCEEEEe-ccCHHHHHHHHHcCCcEEEeec
Q psy16780 49 ETINWSDVTWLKTIT--KLPIVLKG-ILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~--~~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.....+.|+++++.+ ++||++.+ +.++++++.+.++|||+|++++
T Consensus 210 ~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 210 EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 334578999999999 89999996 4899999999999999999965
No 318
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=94.17 E-value=0.27 Score=42.25 Aligned_cols=92 Identities=10% Similarity=-0.008 Sum_probs=66.1
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHH----HHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAE----DAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~----~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.+ .++.+.+.|++.|.= + ..+.+++.+.++++.. .
T Consensus 170 ~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P-----~~~~~~~~~~~l~~~~--~ 239 (370)
T 1chr_A 170 SPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELIEQ---P-----VGRENTQALRRLSDNN--R 239 (370)
T ss_dssp CSHHHHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTEEEEEC---C-----SCTTCHHHHHHHHHHS--C
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C-----CCcccHHHHHHHHhhC--C
Confidence 4455677888888887 478888743 3333 345667777776641 0 0123456678887776 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||+++..+.+..|+.+++..| +|.|++--
T Consensus 240 iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 240 VAIMADESLSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp SEEEESSSCCSHHHHHHHHTTTSCSEEEECT
T ss_pred CCEEeCCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 9999999999999999999986 89998853
No 319
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=94.14 E-value=0.41 Score=41.42 Aligned_cols=91 Identities=13% Similarity=-0.015 Sum_probs=65.4
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHH--cCCcEEEeeccCcCCCCCccchHHHHHHHHHHhC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVE--MGASAIMVSNHGGRQLDYVPASIEALPEIAKAVG 117 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~--aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~ 117 (202)
+++...+.++.+|+.+ ++++.+... .+.++ ++.+.+ .+++.|.= + ..+.+++.+.++++.+.
T Consensus 172 ~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEq---P-----~~~~~~~~~~~l~~~~~ 243 (389)
T 2oz8_A 172 DFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVED---P-----ILRHDHDGLRTLRHAVT 243 (389)
T ss_dssp SHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEES---C-----BCTTCHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeC---C-----CCCcCHHHHHHHHhhCC
Confidence 4556678999999987 678888753 45544 456677 55555431 0 01235667777776652
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
++||++++.+ +..|+.+++..| +|+|++.
T Consensus 244 -~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 244 -WTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp -SSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred -CCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 6999999999 999999999987 8999996
No 320
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=94.11 E-value=1.1 Score=38.11 Aligned_cols=110 Identities=14% Similarity=0.106 Sum_probs=73.7
Q ss_pred cCHHHHHHHH-HcCCcEEEeeccCcCCCCC--ccc----hHHHHHHHHHHhCCCcEEEEecCC-----------------
Q psy16780 73 LTAEDAKIGV-EMGASAIMVSNHGGRQLDY--VPA----SIEALPEIAKAVGHKVDVYLDGGV----------------- 128 (202)
Q Consensus 73 ~~~~~a~~l~-~aG~d~I~v~~~gg~~~~~--~~~----~~~~l~~i~~~~~~~ipiia~GGI----------------- 128 (202)
.+|+++.... +.|+|.+-++-+.-..... +.| +++.|.++++.+ ++|++.-||=
T Consensus 153 TdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~~gg~~ 230 (323)
T 2isw_A 153 TEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINKYGGKM 230 (323)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHHhcccc
Confidence 4688888776 6999999886422111121 233 356789998888 7999999953
Q ss_pred -----CCHHHHHHHHHhCCCEEEEcHHHHHHh----h----hc----Ch-HHHHHHHHHHHHHHHHHHHHhCCC
Q psy16780 129 -----RYGTDVFKALALGAKMVFVGRPALWGL----A----HS----GK-SGVRKVLDILINEFDQALALSGCT 184 (202)
Q Consensus 129 -----~~~~D~~kal~~GAd~V~ig~~~l~~~----~----~~----G~-~~v~~~i~~l~~~L~~~m~~~G~~ 184 (202)
...+++.+++..|..=|-+++-+-.+. . .. .+ .-+....+.+++.++..|..+|+.
T Consensus 231 ~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 304 (323)
T 2isw_A 231 PDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSA 304 (323)
T ss_dssp TTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 235789999999999999999654321 1 11 11 223444567788888888888863
No 321
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=94.07 E-value=0.12 Score=44.74 Aligned_cols=91 Identities=9% Similarity=-0.071 Sum_probs=65.5
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++.+|+.+ ++++.+... .+.++ ++.+.+.|++.|.= + . .+.+++.+.++++.+ +
T Consensus 192 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~ 261 (392)
T 1tzz_A 192 PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYEE---V---G--DPLDYALQAALAEFY--P 261 (392)
T ss_dssp CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEEC---C---S--CTTCHHHHHHHTTTC--C
T ss_pred CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeecC---C---C--ChhhHHHHHHHHhhC--C
Confidence 4455677899999876 578888743 45544 45566677776641 0 0 123566677776655 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-----CCEEEEc
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-----AKMVFVG 148 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-----Ad~V~ig 148 (202)
+||++++.+.+..++.+++..| +|+|++-
T Consensus 262 iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 262 GPMATGENLFSHQDARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp SCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCC
T ss_pred CCEEECCCCCCHHHHHHHHHcCCCccCCcEEEEC
Confidence 9999999999999999999988 8999884
No 322
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=94.06 E-value=0.88 Score=39.03 Aligned_cols=91 Identities=14% Similarity=0.055 Sum_probs=65.7
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHHHHHHH---cCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDAKIGVE---MGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a~~l~~---aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
+++...+.++.+|+.+ ++|+.+... .+.+++..+.+ .|+ .|. + ..++++.+.++++.+ ++
T Consensus 172 ~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~i-~iE-------q---P~~d~~~~~~l~~~~--~i 238 (378)
T 2qdd_A 172 DPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVRARD-WIE-------Q---PCQTLDQCAHVARRV--AN 238 (378)
T ss_dssp CHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCCCCC-EEE-------C---CSSSHHHHHHHHTTC--CS
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhCCCc-EEE-------c---CCCCHHHHHHHHHhC--CC
Confidence 4556778999999987 688888854 56666644332 344 331 1 112667777777665 79
Q ss_pred EEEEecCCCCHHHHHHHHHhC-CCEEEEcHHH
Q psy16780 121 DVYLDGGVRYGTDVFKALALG-AKMVFVGRPA 151 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~G-Ad~V~ig~~~ 151 (202)
||++++.+.+..++.+++..| +|+|++-...
T Consensus 239 PI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 239 PIMLDECLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp CEEECTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CEEECCCcCCHHHHHHHHHhCCCCEEEecccc
Confidence 999999999999999999986 8999996543
No 323
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=94.05 E-value=0.19 Score=41.97 Aligned_cols=92 Identities=14% Similarity=0.160 Sum_probs=50.5
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchH-HHHHHHHHHhCCCcEEEEecCCCCHHHHHHHH---HhCCCEEEEcHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASI-EALPEIAKAVGHKVDVYLDGGVRYGTDVFKAL---ALGAKMVFVGRPA 151 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~-~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal---~~GAd~V~ig~~~ 151 (202)
..++.+++.|+|++.+.|+.|....-..... +.+..+++.+.+ -|.+.|+..+.+-+..+- .+|||++++-.|+
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPY 101 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 4467788999999999876553211111111 223334444433 344466554444333222 2699999999998
Q ss_pred HHHhhhcChHHHHHHHHHHH
Q psy16780 152 LWGLAHSGKSGVRKVLDILI 171 (202)
Q Consensus 152 l~~~~~~G~~~v~~~i~~l~ 171 (202)
++. .-..+++.++++.+.
T Consensus 102 y~~--~~s~~~l~~~f~~va 119 (293)
T 1w3i_A 102 YYP--RMSEKHLVKYFKTLC 119 (293)
T ss_dssp SCS--SCCHHHHHHHHHHHH
T ss_pred CCC--CCCHHHHHHHHHHHH
Confidence 752 013455555544443
No 324
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=94.04 E-value=0.13 Score=40.91 Aligned_cols=90 Identities=12% Similarity=0.088 Sum_probs=57.4
Q ss_pred HHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeecc----CcCCCCCccchHHHHHHHHHHhCCCcEEEEecC
Q psy16780 53 WSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNH----GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGG 127 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~----gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GG 127 (202)
.+.++.+++ ++|++-... .+.++...+.+..+|++.+++. ||+. ..-+|+.+..+. ..+.|++..||
T Consensus 88 ~~~~~~l~~--~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG---~~fdw~~l~~~~---~~~~p~~LAGG 159 (205)
T 1nsj_A 88 IELCRKIAE--RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSG---KTFDWSLILPYR---DRFRYLVLSGG 159 (205)
T ss_dssp HHHHHHHHT--TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCC---SCCCGGGTGGGG---GGSSCEEEESS
T ss_pred HHHHHHHhc--CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCC---CccCHHHHHhhh---cCCCcEEEECC
Confidence 356666653 477773333 3445555554555999999864 3432 122444443321 12679999999
Q ss_pred CCCHHHHHHHHH-hCCCEEEEcHHH
Q psy16780 128 VRYGTDVFKALA-LGAKMVFVGRPA 151 (202)
Q Consensus 128 I~~~~D~~kal~-~GAd~V~ig~~~ 151 (202)
+ +++.+.+++. .++.+|=+.|.+
T Consensus 160 L-~peNV~~ai~~~~p~gVDvsSGv 183 (205)
T 1nsj_A 160 L-NPENVRSAIDVVRPFAVDVSSGV 183 (205)
T ss_dssp C-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred C-CHHHHHHHHHhcCCCEEEECCce
Confidence 8 7788988887 699999999865
No 325
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=94.04 E-value=0.061 Score=44.64 Aligned_cols=42 Identities=26% Similarity=0.472 Sum_probs=38.0
Q ss_pred cHHHHHHHHHhcCCCEEEEe-ccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKG-ILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.++.|+.+++..++||++.. +.+++++..+.+.|+|+|.|..
T Consensus 175 ~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 175 NPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred CHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 57899999998899999984 5899999999999999999965
No 326
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=94.01 E-value=0.6 Score=40.24 Aligned_cols=91 Identities=16% Similarity=0.090 Sum_probs=61.6
Q ss_pred HHHHHHhcCCCEEEEec--c----CHHHHHHHHHcCCcEEEeecc----CcC------------------CCC-------
Q psy16780 56 VTWLKTITKLPIVLKGI--L----TAEDAKIGVEMGASAIMVSNH----GGR------------------QLD------- 100 (202)
Q Consensus 56 i~~i~~~~~~Pv~vK~~--~----~~~~a~~l~~aG~d~I~v~~~----gg~------------------~~~------- 100 (202)
++++++..+.|.++.+- . +.+.++++.++|++++.+.-. +++ -..
T Consensus 114 ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~ 193 (370)
T 1gox_A 114 VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMD 193 (370)
T ss_dssp HHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---
T ss_pred HHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccc
Confidence 45565555567777752 2 245678889999999988642 110 000
Q ss_pred --Cc-------------cchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 101 --YV-------------PASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 101 --~~-------------~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
.+ ..+++.+..+++.. ++||+. +++.+.+++..+..+|||+|.++.
T Consensus 194 ~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 194 KANDSGLSSYVAGQIDRSLSWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp ------HHHHHHHTBCTTCCHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHHTTCSEEEECC
T ss_pred cccCccHHHHHHhhcCccchHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHHcCCCEEEECC
Confidence 00 11345566777766 799986 778999999999999999999953
No 327
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=94.00 E-value=0.086 Score=46.12 Aligned_cols=90 Identities=12% Similarity=0.078 Sum_probs=67.6
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.=- ..+.+++.+.++++.+ .+|
T Consensus 192 ~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP--------~~~~~~~~~~~l~~~~--~iP 261 (404)
T 4e5t_A 192 ERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLEAYDPLWFEEP--------IPPEKPEDMAEVARYT--SIP 261 (404)
T ss_dssp HHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCcEEECC--------CCcccHHHHHHHHhhC--CCC
Confidence 44567899999987 688988753 45554 456677888887520 0122566778888777 899
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
|++++.+.+..|+.+++..| +|.|++--
T Consensus 262 Ia~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 262 VATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp EEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred EEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 99999999999999999987 78888753
No 328
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=93.95 E-value=0.085 Score=45.87 Aligned_cols=91 Identities=12% Similarity=0.018 Sum_probs=67.0
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++.+|+.+ ++++.+... .+.++ ++.+.+.|++.+.= + ..+.+++.+.++++.+ ++|
T Consensus 193 ~~~~e~v~avr~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~---P-----~~~~d~~~~~~l~~~~--~iP 262 (403)
T 2ox4_A 193 KIGVERVEAIRNAVGPDVDIIVENHGHTDLVSAIQFAKAIEEFNIFFYEE---I-----NTPLNPRLLKEAKKKI--DIP 262 (403)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC---C-----SCTTSTHHHHHHHHTC--CSC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEeC---C-----CChhhHHHHHHHHHhC--CCC
Confidence 44667899999986 688888754 45544 45566777776641 0 0123567778887766 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
|++++.+.+..++.+++..| +|+|++--.
T Consensus 263 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 292 (403)
T 2ox4_A 263 LASGERIYSRWGFLPFLEDRSIDVIQPDLG 292 (403)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCCHH
T ss_pred EEecCCcCCHHHHHHHHHcCCCCEEecCcc
Confidence 99999999999999999987 899998543
No 329
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=93.77 E-value=0.2 Score=41.75 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=49.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchH-HHHHHHHHHhCCCcEEEEecCCCCHHHHHH---HHHhCCCEEEEcHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASI-EALPEIAKAVGHKVDVYLDGGVRYGTDVFK---ALALGAKMVFVGRPA 151 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~-~~l~~i~~~~~~~ipiia~GGI~~~~D~~k---al~~GAd~V~ig~~~ 151 (202)
..++.+++.|+|++.+.|+.|....-..... +.+..+++.+++ -|.+.|+..+.+-+.. +-.+|||++++-.|+
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPY 101 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 4467788999999999876553211111111 123333333333 3344555444433322 223799999999998
Q ss_pred HHHhhhcChHHHHHHHHHH
Q psy16780 152 LWGLAHSGKSGVRKVLDIL 170 (202)
Q Consensus 152 l~~~~~~G~~~v~~~i~~l 170 (202)
++. .-..+++.++++.+
T Consensus 102 y~~--~~s~~~l~~~f~~v 118 (288)
T 2nuw_A 102 YFP--RLPEKFLAKYYEEI 118 (288)
T ss_dssp SSC--SCCHHHHHHHHHHH
T ss_pred CCC--CCCHHHHHHHHHHH
Confidence 752 01345555444444
No 330
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=93.63 E-value=0.11 Score=45.47 Aligned_cols=89 Identities=11% Similarity=0.018 Sum_probs=65.4
Q ss_pred ccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 51 INWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 51 ~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
...+.++++|+.+ ++|+.+... .+.++ ++.+.+.|++.|.=- . .+.+++.+.++++.+ .+||
T Consensus 163 ~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP------~--~~~d~~~~~~l~~~~--~iPI 232 (405)
T 3rr1_A 163 AAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEP------V--LAEQAETYARLAAHT--HLPI 232 (405)
T ss_dssp HHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGGGCCSCEECS------S--CCSSTHHHHHHHTTC--SSCE
T ss_pred HHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC------C--CcccHHHHHHHHhcC--CCCE
Confidence 3467899999987 688888753 45555 456667788777520 0 122556677776655 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++++.+.+..|+.+++..| +|.|++--
T Consensus 233 a~dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 233 AAGERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp EECTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred EecCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 9999999999999999987 89998843
No 331
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=93.62 E-value=0.41 Score=40.38 Aligned_cols=95 Identities=21% Similarity=0.164 Sum_probs=58.8
Q ss_pred HHHHHHHHHhcCCCEEEEecc--CHHH----HHHHHHcCCcEEEeeccCcCC-CCCccchHHHHHHHHHHhCCCcEEEEe
Q psy16780 53 WSDVTWLKTITKLPIVLKGIL--TAED----AKIGVEMGASAIMVSNHGGRQ-LDYVPASIEALPEIAKAVGHKVDVYLD 125 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~--~~~~----a~~l~~aG~d~I~v~~~gg~~-~~~~~~~~~~l~~i~~~~~~~ipiia~ 125 (202)
.+.++++. .++.||++|-.. ++++ ++.+.+.|-+-|++.-.|-+- .+.-..++..++.+++ + .+||+.+
T Consensus 145 ~~LLr~va-~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~--~~PV~~D 220 (298)
T 3fs2_A 145 TDLLIAAA-RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-L--GAPVIFD 220 (298)
T ss_dssp HHHHHHHH-HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-T--TSCEEEE
T ss_pred HHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-c--CCcEEEc
Confidence 44677765 469999999763 5533 455677888877775443211 1111135667777766 5 7999984
Q ss_pred ---------------cCCCCH--HHHHHHHHhCCCEEEEcHHH
Q psy16780 126 ---------------GGVRYG--TDVFKALALGAKMVFVGRPA 151 (202)
Q Consensus 126 ---------------GGI~~~--~D~~kal~~GAd~V~ig~~~ 151 (202)
||-|.. .-...|+++|||+++|=+.+
T Consensus 221 ~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 221 ATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp HHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred CCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecC
Confidence 344332 23446788999998886643
No 332
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=93.58 E-value=0.25 Score=42.99 Aligned_cols=91 Identities=10% Similarity=0.016 Sum_probs=67.5
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGH 118 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~ 118 (202)
+++...+.++++|+.+ ++++.+..- .+.++ ++.+.+.|++.|.= + ..+.+ ++.+.++++..
T Consensus 181 ~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe---P-----~~~~d~~~~~~~l~~~~-- 250 (392)
T 3ddm_A 181 DDARDVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWLEE---P-----LRADRPAAEWAELAQAA-- 250 (392)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC---C-----SCTTSCHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEEC---C-----CCccchHHHHHHHHHhc--
Confidence 4555677899999986 678888754 45554 45566778887751 0 01224 67778887776
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
.+||++++.+.+..|+.+++..| +|.|++-
T Consensus 251 ~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 251 PMPLAGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp SSCEEECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 79999999999999999999987 7888874
No 333
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.55 E-value=0.55 Score=38.75 Aligned_cols=97 Identities=19% Similarity=0.239 Sum_probs=61.1
Q ss_pred HHHHHHHHHhcCCCEEEEecc--CHHHHH----HHHHcCCcEEEeeccCcCCC---CCccchHHHHHHHHHHhCCCcEEE
Q psy16780 53 WSDVTWLKTITKLPIVLKGIL--TAEDAK----IGVEMGASAIMVSNHGGRQL---DYVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~--~~~~a~----~l~~aG~d~I~v~~~gg~~~---~~~~~~~~~l~~i~~~~~~~ipii 123 (202)
...++++.+ ++.||++|... +++++. .+...|-+-+.+--+|++.. .....++..+..+++.. .+||+
T Consensus 120 ~~ll~~~a~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~--~~pVi 196 (262)
T 1zco_A 120 FELLKEVGK-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELS--HLPII 196 (262)
T ss_dssp HHHHHHHTT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEE
T ss_pred HHHHHHHHh-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhh--CCCEE
Confidence 446777765 69999999763 666643 44567876666655554332 11223556777777765 68997
Q ss_pred Eec----CCCCH--HHHHHHHHhCCCEEEEcHHHH
Q psy16780 124 LDG----GVRYG--TDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 124 a~G----GI~~~--~D~~kal~~GAd~V~ig~~~l 152 (202)
++. |.+.. .=+..+.++||+++++=+.+-
T Consensus 197 ~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~ 231 (262)
T 1zco_A 197 VDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPE 231 (262)
T ss_dssp ECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred EEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 743 33331 224456779999999987643
No 334
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=93.55 E-value=0.091 Score=46.19 Aligned_cols=88 Identities=8% Similarity=-0.097 Sum_probs=66.1
Q ss_pred cHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEE
Q psy16780 52 NWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipii 123 (202)
..+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.=- . .+.+++.+.++++.+ .+||+
T Consensus 206 d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP------~--~~~d~~~~~~l~~~~--~iPIa 275 (418)
T 3r4e_A 206 VPKLFEELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLEDC------T--PAENQEAFRLVRQHT--VTPLA 275 (418)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEESC------S--CCSSGGGGHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECC------C--CccCHHHHHHHHhcC--CCCEE
Confidence 467899999987 688988754 45554 466677888887520 0 112455677777776 79999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 124 LDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 124 a~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+++.+.+..|+.+++..| +|.|++--
T Consensus 276 ~dE~~~~~~~~~~~l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 276 VGEIFNTIWDAKDLIQNQLIDYIRATV 302 (418)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EcCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 999999999999999987 89998754
No 335
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=93.53 E-value=0.12 Score=45.62 Aligned_cols=89 Identities=7% Similarity=-0.150 Sum_probs=67.4
Q ss_pred ccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 51 INWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 51 ~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
...+.++++|+.+ ++|+.+... .+.++ ++.+.+.|++.|.--- .+.+++.+.++++.+ ++||
T Consensus 212 ~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~--------~~~d~~~~~~l~~~~--~iPI 281 (425)
T 3vcn_A 212 SVPKLFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSV--------PAENQAGFRLIRQHT--TTPL 281 (425)
T ss_dssp TTHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCS--------CCSSTTHHHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCC--------ChhhHHHHHHHHhcC--CCCE
Confidence 4578899999987 678888754 45555 4666778888875210 112456677887776 8999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++++.+.+..++.+++..| +|.|++--
T Consensus 282 a~dE~~~~~~~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 282 AVGEIFAHVWDAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecCh
Confidence 9999999999999999987 89988754
No 336
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=93.53 E-value=0.092 Score=42.05 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=37.6
Q ss_pred HHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH---H------HHHHHHhCCCEEEE
Q psy16780 77 DAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT---D------VFKALALGAKMVFV 147 (202)
Q Consensus 77 ~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~---D------~~kal~~GAd~V~i 147 (202)
.++. .+.|+| ++.+. ..+..+++.++ .| +.++||+-.. | ..+ +.+|||.+.+
T Consensus 131 ~a~~-~e~G~d-vV~~~-------------~~~~~ir~~~~--~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVv 191 (213)
T 1vqt_A 131 IEKL-NKLGCD-FVLPG-------------PWAKALREKIK--GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVL 191 (213)
T ss_dssp HHHH-HHHTCE-EECCH-------------HHHHHHTTTCC--SC-EEECCBC---------CCBCHHH-HTTTCSEEEE
T ss_pred HHHH-hcCCCE-EEEcH-------------HHHHHHHHHCC--CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEE
Confidence 3556 888999 54421 33444544442 35 8888986532 2 677 8999999999
Q ss_pred cHHHHH
Q psy16780 148 GRPALW 153 (202)
Q Consensus 148 g~~~l~ 153 (202)
||+++.
T Consensus 192 GR~I~~ 197 (213)
T 1vqt_A 192 GREIYL 197 (213)
T ss_dssp SHHHHT
T ss_pred ChhhcC
Confidence 999985
No 337
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=93.52 E-value=1.2 Score=45.18 Aligned_cols=119 Identities=10% Similarity=0.099 Sum_probs=82.9
Q ss_pred HHHHHHHHcCCcEEEeeccCc-CCCCCc---cchHHHHHHHHHH-----hCCCcEEEE-ecCCCCHHHHHHHHHhCCCEE
Q psy16780 76 EDAKIGVEMGASAIMVSNHGG-RQLDYV---PASIEALPEIAKA-----VGHKVDVYL-DGGVRYGTDVFKALALGAKMV 145 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg-~~~~~~---~~~~~~l~~i~~~-----~~~~ipiia-~GGI~~~~D~~kal~~GAd~V 145 (202)
+.|..+++.|+..+++|-++. ...+.. .|.+-++..+.++ ++.++-++. +|-+|+.-+++-.+-.||++|
T Consensus 585 ~~a~~av~~g~~iliLsDr~~~~~~~~~~~~ip~lla~~avh~~Li~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av 664 (1520)
T 1ofd_A 585 KTAIATVQAGAEILVLTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAI 664 (1520)
T ss_dssp HHHHHHHHTTCSEEEEESSGGGCCCCTTEEECCHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHCCCcEEEEcCCCCcCCCCCCccCcCHHHHHHHHHHHHHhcCCcccccEEEEeCCcChHHHHHHHHHcchhhh
Confidence 456778899999999998651 112221 2344444444443 234677777 788999999999999999999
Q ss_pred EEcHHH--HHHh---------hhcC-------hHHHHHHHHHHHHHHHHHHHHhCCCCHHhhhhccc
Q psy16780 146 FVGRPA--LWGL---------AHSG-------KSGVRKVLDILINEFDQALALSGCTSVGEIQREMV 194 (202)
Q Consensus 146 ~ig~~~--l~~~---------~~~G-------~~~v~~~i~~l~~~L~~~m~~~G~~~i~el~~~~~ 194 (202)
-=--+| +..+ ...| .+.+.++++.+.++|...|..+|.++++.-++..+
T Consensus 665 ~Pyla~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqi 731 (1520)
T 1ofd_A 665 CPYLALESVRQWWLDEKTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQI 731 (1520)
T ss_dssp ECHHHHHHHHHHHSCHHHHHHHTTSSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCC
T ss_pred cHHHHHHHHHHHHhcccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCcee
Confidence 732222 1112 1122 35788999999999999999999999998877643
No 338
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=93.51 E-value=0.23 Score=43.50 Aligned_cols=89 Identities=8% Similarity=0.078 Sum_probs=65.8
Q ss_pred ccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 51 INWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 51 ~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
...+.++++|+.+ ++++.+-.. .+.+++ +.+.+.|++.|.-- + ..+.+++.+.++++.. .+||
T Consensus 198 ~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP------~-~~~~~~~~~~~l~~~~--~iPI 268 (410)
T 3dip_A 198 DGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVLWVEDP------I-AKMDNIPAVADLRRQT--RAPI 268 (410)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEECC------B-SCTTCHHHHHHHHHHH--CCCE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC------C-CCcccHHHHHHHHhhC--CCCE
Confidence 4567899999987 578888643 466554 45567788877621 0 0122566778887777 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
++++.+.+..++.+++..| +|.|++-
T Consensus 269 a~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 269 CGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred EecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 9999999999999999987 7999884
No 339
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=93.49 E-value=2.9 Score=35.23 Aligned_cols=110 Identities=18% Similarity=0.174 Sum_probs=73.2
Q ss_pred cCHHHHHHHH-HcCCcEEEeecc---CcCCCCCc-cchHHHHHHHHHHhCCCcEEEEecCC-------------------
Q psy16780 73 LTAEDAKIGV-EMGASAIMVSNH---GGRQLDYV-PASIEALPEIAKAVGHKVDVYLDGGV------------------- 128 (202)
Q Consensus 73 ~~~~~a~~l~-~aG~d~I~v~~~---gg~~~~~~-~~~~~~l~~i~~~~~~~ipiia~GGI------------------- 128 (202)
.+|+++.... +.|+|.+-++-+ |-...++. .-+++.|.++.+.+ .+|++.-||=
T Consensus 153 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~~gg~~~~ 230 (305)
T 1rvg_A 153 TNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRASGGEIGE 230 (305)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHHTTCCCCS
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHhhcccccc
Confidence 4588888776 599999988642 22211121 23667899998888 6999998875
Q ss_pred --C-CHHHHHHHHHhCCCEEEEcHHHHHHh----h---hcC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q psy16780 129 --R-YGTDVFKALALGAKMVFVGRPALWGL----A---HSG-----K-SGVRKVLDILINEFDQALALSGCT 184 (202)
Q Consensus 129 --~-~~~D~~kal~~GAd~V~ig~~~l~~~----~---~~G-----~-~~v~~~i~~l~~~L~~~m~~~G~~ 184 (202)
. ..+++.+++..|..=|-+++-+-.+. . .+. + .-+....+.+++.++..|..+|+.
T Consensus 231 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 302 (305)
T 1rvg_A 231 AAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSV 302 (305)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 45778889999999999999654321 1 111 1 123344456777777778877764
No 340
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=93.44 E-value=0.1 Score=45.95 Aligned_cols=89 Identities=7% Similarity=-0.119 Sum_probs=66.8
Q ss_pred ccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 51 INWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 51 ~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
...+.++++|+.+ ++|+.+... .+.++ ++.+.+.|++.|.=-- .+.+++.+.++++.+ .+||
T Consensus 211 ~d~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~--------~~~d~~~~~~l~~~~--~iPI 280 (424)
T 3v3w_A 211 YIPDVFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDAV--------PAENQESFKLIRQHT--TTPL 280 (424)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCS--------CCSSTTHHHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCC--------ChHhHHHHHHHHhhC--CCCE
Confidence 3467899999987 688988754 45555 4566778888875210 112456677887776 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++++.+.+..++.++++.| +|.|++--
T Consensus 281 a~dE~~~~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 281 AVGEVFNSIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EEccCcCCHHHHHHHHHcCCCCeEeecc
Confidence 9999999999999999987 79988754
No 341
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=93.38 E-value=0.1 Score=43.04 Aligned_cols=42 Identities=21% Similarity=0.500 Sum_probs=37.1
Q ss_pred cHHHHHHHHHhcCCCEEEEe-ccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKG-ILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.++.++++++..++||++.. +.++++++.+.++|+|+|.|+.
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 36789999998899999985 5689999999999999999965
No 342
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=93.36 E-value=0.11 Score=45.28 Aligned_cols=89 Identities=16% Similarity=0.003 Sum_probs=65.5
Q ss_pred ccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 51 INWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 51 ~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
...+.++++|+.+ ++++.+... .+.+++ +.+.+.|++.|.=- . .+.+++.+.++++.+ .+||
T Consensus 186 ~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP------~--~~~~~~~~~~l~~~~--~iPI 255 (401)
T 3sbf_A 186 NTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEVEQYKPYFIEDI------L--PPNQTEWLDNIRSQS--SVSL 255 (401)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEECS------S--CTTCGGGHHHHHTTC--CCCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC------C--ChhHHHHHHHHHhhC--CCCE
Confidence 4467899999987 688998854 455554 55667788777520 0 112455677776655 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++++.+.+..|+.+++..| +|.|++--
T Consensus 256 a~dE~~~~~~~~~~~i~~~~~d~v~~k~ 283 (401)
T 3sbf_A 256 GLGELFNNPEEWKSLIANRRIDFIRCHV 283 (401)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred EeCCccCCHHHHHHHHhcCCCCEEecCc
Confidence 9999999999999999987 89988754
No 343
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=93.34 E-value=0.28 Score=42.18 Aligned_cols=94 Identities=11% Similarity=0.086 Sum_probs=64.3
Q ss_pred Ccc-ccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 48 DET-INWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 48 d~~-~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
++. ...+.++++|+.+ ++++.+... .+.+++ +.+.+.|++.|.= + ..+.+++.+.++++..
T Consensus 166 ~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~-- 235 (367)
T 3dg3_A 166 RPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLFAEE---L-----CPADDVLSRRRLVGQL-- 235 (367)
T ss_dssp SSTHHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEES---C-----SCTTSHHHHHHHHHHC--
T ss_pred ChhhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEEC---C-----CCcccHHHHHHHHHhC--
Confidence 444 4566788888876 567777643 455544 3444556665541 0 0122466677777776
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHH
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPA 151 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~ 151 (202)
.+||++++.+.+..|+.+++..| +|.|++--..
T Consensus 236 ~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~ 269 (367)
T 3dg3_A 236 DMPFIADESVPTPADVTREVLGGSATAISIKTAR 269 (367)
T ss_dssp SSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHH
T ss_pred CCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhh
Confidence 79999999999999999999987 8999985443
No 344
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=93.32 E-value=0.15 Score=44.98 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=65.8
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++.+|+.+ ++++.+... .+.++ ++.+.+.|++.|.=- ..+.+++.+.++++.+ +
T Consensus 211 ~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~ 280 (428)
T 3bjs_A 211 AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWLEEP--------FACNDFASYREVAKIT--P 280 (428)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCEECC--------SCTTCHHHHHHHTTTC--S
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CCccCHHHHHHHHHhC--C
Confidence 4555678899999886 678887743 45544 456777888876410 0123566677776655 6
Q ss_pred -cEEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 120 -VDVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 120 -ipiia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
+||++++.+.+..++.+++..| +|+|++-
T Consensus 281 ~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 281 LVPIAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp SSCEEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred CCcEEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 9999999999999999999987 7888873
No 345
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=93.30 E-value=0.12 Score=42.08 Aligned_cols=41 Identities=27% Similarity=0.190 Sum_probs=36.6
Q ss_pred cHHHHHHHHHhc-CCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT-KLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~-~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++++.+ ++||++.+. .++++++.+. .|||+|++++
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 688999999999 799999964 7999999988 7999999965
No 346
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=93.30 E-value=0.11 Score=42.59 Aligned_cols=41 Identities=32% Similarity=0.304 Sum_probs=36.9
Q ss_pred cHHHHHHHHHhc-CCCEEEEe-ccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT-KLPIVLKG-ILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~-~~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++++.+ ++||++.+ +.++++++.+.+ |||+|++++
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 578999999999 99999996 478999999998 999999954
No 347
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.30 E-value=0.76 Score=39.61 Aligned_cols=128 Identities=21% Similarity=0.239 Sum_probs=76.1
Q ss_pred HHHHHHHHHhcCCCEEEEecc--CHHHH----HHHHHcCCcEEEeeccCcCCCC---CccchHHHHHHHHHHhCCCcEEE
Q psy16780 53 WSDVTWLKTITKLPIVLKGIL--TAEDA----KIGVEMGASAIMVSNHGGRQLD---YVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~--~~~~a----~~l~~aG~d~I~v~~~gg~~~~---~~~~~~~~l~~i~~~~~~~ipii 123 (202)
...++++. .++.||++|-.. +.++. +.+...|-+-+++.-+|.+... ....++..+..+++.. .+||+
T Consensus 203 ~~LL~~va-~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~--~lpVi 279 (350)
T 1vr6_A 203 FRLLSKAG-SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKES--HLPIL 279 (350)
T ss_dssp HHHHHHHH-TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEE
T ss_pred HHHHHHHH-ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhh--CCCEE
Confidence 45677776 468999999653 66554 4456688877777545544331 1223556677777765 68997
Q ss_pred E-ec---CCCC--HHHHHHHHHhCCCEEEEcHHHHHHhh-hcChHHH-HHHHHHHHHHHHHHHHHhCC
Q psy16780 124 L-DG---GVRY--GTDVFKALALGAKMVFVGRPALWGLA-HSGKSGV-RKVLDILINEFDQALALSGC 183 (202)
Q Consensus 124 a-~G---GI~~--~~D~~kal~~GAd~V~ig~~~l~~~~-~~G~~~v-~~~i~~l~~~L~~~m~~~G~ 183 (202)
+ ++ |-+. ..=...++++||++++|=+.+--.-+ +.|+..+ -+-++.+.++++..-...|.
T Consensus 280 ~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir~i~~alg~ 347 (350)
T 1vr6_A 280 VDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKLADALGV 347 (350)
T ss_dssp ECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred EeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHHHHHHHhCc
Confidence 7 22 4443 34455677899999999875432110 1332110 12345666666666666663
No 348
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=93.28 E-value=0.13 Score=45.05 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=66.6
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.=- . .+.+++.+.++++.+ .+|
T Consensus 185 ~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP------~--~~~d~~~~~~l~~~~--~iP 254 (412)
T 4e4u_A 185 DRCELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLEKYDPLWFEEP------V--PPGQEEAIAQVAKHT--SIP 254 (412)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECC------S--CSSCHHHHHHHHHTC--SSC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCcEEECC------C--ChhhHHHHHHHHhhC--CCC
Confidence 34567899999987 578888753 45555 456677888877520 0 122567778887766 899
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
|++++.+.+..++.+++..| +|.|++-
T Consensus 255 Ia~dE~~~~~~~~~~~i~~~a~d~v~~d 282 (412)
T 4e4u_A 255 IATGERLTTKYEFHKLLQAGGASILQLN 282 (412)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred EEecCccCCHHHHHHHHHcCCCCEEEeC
Confidence 99999999999999999987 7998874
No 349
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=93.25 E-value=0.99 Score=37.54 Aligned_cols=96 Identities=20% Similarity=0.229 Sum_probs=60.5
Q ss_pred HHHHHHHHHhcCCCEEEEecc--CHHHH----HHHHHcCCcEEEeeccCcCCC---CCccchHHHHHHHHHHhCCCcEEE
Q psy16780 53 WSDVTWLKTITKLPIVLKGIL--TAEDA----KIGVEMGASAIMVSNHGGRQL---DYVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~--~~~~a----~~l~~aG~d~I~v~~~gg~~~---~~~~~~~~~l~~i~~~~~~~ipii 123 (202)
...++++.+ ++.||++|-.. ++++. ..+...|-+-+++--+|.+.. .....++..+..+++.. .+||+
T Consensus 135 ~~ll~~~a~-~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~--~lpVi 211 (276)
T 1vs1_A 135 FPLLREVGR-SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEAT--HLPVI 211 (276)
T ss_dssp HHHHHHHHH-HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHB--SSCEE
T ss_pred HHHHHHHHc-cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHh--CCCEE
Confidence 446666663 58999999753 66554 345567876566544344332 12234566677777765 68987
Q ss_pred Ee-c---CCCC--HHHHHHHHHhCCCEEEEcHHH
Q psy16780 124 LD-G---GVRY--GTDVFKALALGAKMVFVGRPA 151 (202)
Q Consensus 124 a~-G---GI~~--~~D~~kal~~GAd~V~ig~~~ 151 (202)
++ + |.++ ..=...++++||++++|=+.+
T Consensus 212 ~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 212 VDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp ECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred EeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 62 2 5443 344556778999999998765
No 350
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=93.22 E-value=0.18 Score=44.99 Aligned_cols=85 Identities=15% Similarity=0.079 Sum_probs=55.9
Q ss_pred HHHHHHHHHhc--CCCEEEE-eccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC
Q psy16780 53 WSDVTWLKTIT--KLPIVLK-GILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR 129 (202)
Q Consensus 53 ~~~i~~i~~~~--~~Pv~vK-~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~ 129 (202)
.+...++.+.. +++++.- ++.++++++.+.++ +|++.|+..-=+ .......++++.. +++.|+ |++
T Consensus 195 l~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr----~~d~~~~~~~l~~---~~~KIC---Git 263 (452)
T 1pii_A 195 LNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMA----HDDLHAAVRRVLL---GENKVC---GLT 263 (452)
T ss_dssp THHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHT----CSCHHHHHHHHHH---CSCEEC---CCC
T ss_pred HHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcC----CcCHHHHHHHHHH---Hhcccc---CCC
Confidence 44555555554 4455443 23789999999999 999999542101 1112234555432 355554 699
Q ss_pred CHHHHHHHHHhCCCEEEEc
Q psy16780 130 YGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 130 ~~~D~~kal~~GAd~V~ig 148 (202)
+.+|+..+..+|||++++=
T Consensus 264 ~~eda~~a~~~Gad~iGfI 282 (452)
T 1pii_A 264 RGQDAKAAYDAGAIYGGLI 282 (452)
T ss_dssp SHHHHHHHHHHTCSEEEEE
T ss_pred cHHHHHHHHhcCCCEEEee
Confidence 9999999999999998864
No 351
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=93.20 E-value=0.19 Score=43.89 Aligned_cols=90 Identities=11% Similarity=0.113 Sum_probs=66.0
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|++.|.=- ..+.+++.+.++++.+ ++|
T Consensus 194 ~~~~e~v~avRea~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEeP--------~~~~d~~~~~~l~~~~--~iP 263 (410)
T 2qq6_A 194 EAMVARVAAVREAVGPEVEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEEP--------TPPENLDALAEVRRST--STP 263 (410)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHTTC--SSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCeEECC--------CChhhHHHHHHHHhhC--CCC
Confidence 44567899999886 578888753 455544 55667788876520 0123566777777665 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
|++++.+.+..++.+++..| +|.|++--
T Consensus 264 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~ 292 (410)
T 2qq6_A 264 ICAGENVYTRFDFRELFAKRAVDYVMPDV 292 (410)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECCBH
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 99999999999999999987 89998843
No 352
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=93.19 E-value=1.1 Score=35.47 Aligned_cols=86 Identities=19% Similarity=0.106 Sum_probs=55.5
Q ss_pred HHHHHHHHHhc-CCCEE--EEeccCH-HHHHHHHHcCCcEEEeeccCcCCCCCccchHH-HHHHHHHHhCCCcEEEE-ec
Q psy16780 53 WSDVTWLKTIT-KLPIV--LKGILTA-EDAKIGVEMGASAIMVSNHGGRQLDYVPASIE-ALPEIAKAVGHKVDVYL-DG 126 (202)
Q Consensus 53 ~~~i~~i~~~~-~~Pv~--vK~~~~~-~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~-~l~~i~~~~~~~ipiia-~G 126 (202)
.+.|+++|+.+ +.|++ +|....+ ..++.+.++|+|+++++..++ ..+.. .+..+++ . .++.+. .=
T Consensus 47 ~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~------~~~~~~~~~~~~~-~--g~~~~~d~l 117 (218)
T 3jr2_A 47 MKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAH------IATIAACKKVADE-L--NGEIQIEIY 117 (218)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECC
T ss_pred HHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCC------HHHHHHHHHHHHH-h--CCccceeee
Confidence 56899999884 55654 5655344 357889999999999965322 11222 2333333 3 344443 33
Q ss_pred CCCCHHHHHHHHHhCCCEEEE
Q psy16780 127 GVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~i 147 (202)
|+.|++++.++...|+|.+.+
T Consensus 118 ~~~T~~~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 118 GNWTMQDAKAWVDLGITQAIY 138 (218)
T ss_dssp SSCCHHHHHHHHHTTCCEEEE
T ss_pred ecCCHHHHHHHHHcCccceee
Confidence 457888999888889997765
No 353
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=93.18 E-value=0.41 Score=40.93 Aligned_cols=90 Identities=16% Similarity=0.160 Sum_probs=63.1
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cC---HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LT---AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~---~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
.|+...+.++++|+.+ ++++.+-.. .+ .+.++.+.+.|++.|.= + . .+.+++.+.++++.+ ++
T Consensus 165 ~~~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE~---P---~--~~~~~~~~~~l~~~~--~i 234 (368)
T 1sjd_A 165 EPGWDVEPVRAVRERFGDDVLLQVDANTAYTLGDAPQLARLDPFGLLLIEQ---P---L--EEEDVLGHAELARRI--QT 234 (368)
T ss_dssp BTTBSHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHTTGGGCCSEEEC---C---S--CTTCHHHHHHHHTTC--SS
T ss_pred CchhHHHHHHHHHHhcCCCceEEEeccCCCCHHHHHHHHHHHhcCCCeEeC---C---C--ChhhHHHHHHHHHhC--CC
Confidence 3566788899998876 567766532 23 33444455677776641 0 0 123566677776655 79
Q ss_pred EEEEecCCCCHHHHHHHHHhC-CCEEEE
Q psy16780 121 DVYLDGGVRYGTDVFKALALG-AKMVFV 147 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~G-Ad~V~i 147 (202)
||++++.+.+..++.+++..| +|.|++
T Consensus 235 pIa~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 235 PICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp CEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 999999999999999999987 799988
No 354
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=93.11 E-value=0.77 Score=40.04 Aligned_cols=95 Identities=23% Similarity=0.218 Sum_probs=60.9
Q ss_pred HHHHHHHHHhcCCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCC---ccchHHHHHHHHHHhCCCcEEE
Q psy16780 53 WSDVTWLKTITKLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDY---VPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~---~~~~~~~l~~i~~~~~~~ipii 123 (202)
++.++++. .++.||++|-. .++++. +.+.+.|.+-|++.-.|.+.... ...++..+..+++.. .+||+
T Consensus 239 ~~LL~~~a-~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~--~lpV~ 315 (385)
T 3nvt_A 239 FELLKAAG-RVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKET--HLPVM 315 (385)
T ss_dssp HHHHHHHH-TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEE
T ss_pred HHHHHHHH-ccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhc--CCCEE
Confidence 45666665 46899999965 466554 45567788767665444333222 123566777777666 78997
Q ss_pred Ee----cCCCCHH--HHHHHHHhCCCEEEEcHH
Q psy16780 124 LD----GGVRYGT--DVFKALALGAKMVFVGRP 150 (202)
Q Consensus 124 a~----GGI~~~~--D~~kal~~GAd~V~ig~~ 150 (202)
.+ +|-+... =...|+++||++++|=..
T Consensus 316 ~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H 348 (385)
T 3nvt_A 316 VDVTHSTGRKDLLLPCAKAALAIEADGVMAEVH 348 (385)
T ss_dssp EEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred EcCCCCCCccchHHHHHHHHHHhCCCEEEEEec
Confidence 75 3444432 245678899999988664
No 355
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=93.02 E-value=0.16 Score=44.80 Aligned_cols=89 Identities=15% Similarity=-0.011 Sum_probs=66.2
Q ss_pred ccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 51 INWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 51 ~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
...+.++++|+.+ ++++.+... .+.+++ +.+.+.|++.|.=- . .+.+++.+.++++.+ .+||
T Consensus 207 ~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEqP------~--~~~d~~~~~~l~~~~--~iPI 276 (422)
T 3tji_A 207 NTVEMFHALREKYGWKLHILHDVHERLFPQQAVQLAKQLEPFQPYFIEDI------L--PPQQSAWLEQVRQQS--CVPL 276 (422)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECC------S--CGGGGGGHHHHHHHC--CCCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEECC------C--ChhhHHHHHHHHhhC--CCCE
Confidence 3467899999986 688988754 455554 55667788777510 0 122456677887776 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++++.+.+..|+.+++..| +|.|++--
T Consensus 277 a~dE~~~~~~~~~~ll~~ga~d~v~~k~ 304 (422)
T 3tji_A 277 ALGELFNNPAEWHDLIVNRRIDFIRCHV 304 (422)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCG
T ss_pred EEeCCcCCHHHHHHHHhcCCCCEEecCc
Confidence 9999999999999999987 89998754
No 356
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=93.01 E-value=0.31 Score=42.34 Aligned_cols=93 Identities=12% Similarity=0.133 Sum_probs=65.8
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+++++ +.+.+.|++.|.= + ..+.+++.+.++++.. .
T Consensus 201 ~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~--~ 270 (390)
T 3ugv_A 201 DPAVDIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIEE---P-----VVYDNFDGYAQLRHDL--K 270 (390)
T ss_dssp SHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEEC---C-----SCTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC---C-----CCcccHHHHHHHHHhc--C
Confidence 3445567888888876 577887743 455443 4555667766641 0 0122566778887776 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
+||+++..+.+..|+.+++..| +|.|++--.
T Consensus 271 iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~ 302 (390)
T 3ugv_A 271 TPLMIGENFYGPREMHQALQAGACDLVMPDFM 302 (390)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCBHH
T ss_pred CCEEeCCCcCCHHHHHHHHHcCCCCEEEeCcc
Confidence 9999999999999999999987 799987654
No 357
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=92.97 E-value=0.11 Score=42.50 Aligned_cols=41 Identities=29% Similarity=0.252 Sum_probs=36.9
Q ss_pred cHHHHHHHHHhc-CCCEEEEe-ccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT-KLPIVLKG-ILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~-~~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++++.+ ++|+++.+ +.++++++.+.+ |||+|++++
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGS 219 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGN 219 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEECh
Confidence 578999999999 99999996 478999999999 999999954
No 358
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=92.94 E-value=0.32 Score=41.89 Aligned_cols=91 Identities=11% Similarity=0.095 Sum_probs=63.2
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.+++ +.+.+.|++.|.= + . .+.+++.+.++++.. .
T Consensus 179 ~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~ 248 (372)
T 3tj4_A 179 DPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEE---P---L--WYDDVTSHARLARNT--S 248 (372)
T ss_dssp SHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEEES---C---S--CTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEEC---C---C--CchhHHHHHHHHhhc--C
Confidence 3444567888888886 577877743 455554 3344555555531 0 0 122566777787776 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
+||+++..+.+..|+.+++..| +|.|++-
T Consensus 249 iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 249 IPIALGEQLYTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CCEEeCCCccCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999999999999987 7898874
No 359
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=92.90 E-value=0.58 Score=39.82 Aligned_cols=68 Identities=22% Similarity=0.258 Sum_probs=49.2
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEE---ecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYL---DGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia---~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
+.++.+.++|||.|.+-+ .++.+.+.++.+.+ ++|+.+ .+|-...-+..+.-++|...|.++...+
T Consensus 193 ~Ra~Ay~eAGAd~i~~e~---------~~~~e~~~~i~~~l--~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ 261 (318)
T 1zlp_A 193 RRANLYKEAGADATFVEA---------PANVDELKEVSAKT--KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAV 261 (318)
T ss_dssp HHHHHHHHTTCSEEEECC---------CCSHHHHHHHHHHS--CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEcC---------CCCHHHHHHHHHhc--CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 456788999999999843 35667788888888 699854 3432222335566678999999999877
Q ss_pred HH
Q psy16780 153 WG 154 (202)
Q Consensus 153 ~~ 154 (202)
++
T Consensus 262 ra 263 (318)
T 1zlp_A 262 YA 263 (318)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 360
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=92.86 E-value=0.9 Score=39.52 Aligned_cols=93 Identities=10% Similarity=0.003 Sum_probs=68.0
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cC---HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LT---AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~---~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
+++...+.++++|+.+ ++++.+..- .+ .+.++.+.+.|++.|.= + ..+.+++.+.++++.. .+
T Consensus 187 ~~~~d~~~v~avR~a~G~~~~L~vDaN~~w~~~~~~~~~~l~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~--~i 256 (400)
T 3mwc_A 187 KPGWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQ---P-----LHYEALLDLKELGERI--ET 256 (400)
T ss_dssp BTTBSHHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHHHGGGCCSCEES---C-----SCTTCHHHHHHHHHHS--SS
T ss_pred CcchHHHHHHHHHHhcCCCCEEEEeCCCCCCHHHHHHHHHHHhcCCCEEeC---C-----CChhhHHHHHHHHhhC--CC
Confidence 3555678899999886 678888743 22 45566677777777641 0 0122566777887776 79
Q ss_pred EEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 121 DVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
||+++..+.+..|+.+++..| +|.|++--.
T Consensus 257 PIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 287 (400)
T 3mwc_A 257 PICLDESLISSRVAEFVAKLGISNIWNIKIQ 287 (400)
T ss_dssp CEEESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CEEEeCCcCCHHHHHHHHhcCCCCEEEEcch
Confidence 999999999999999999987 799988653
No 361
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=92.82 E-value=0.35 Score=41.56 Aligned_cols=92 Identities=9% Similarity=0.116 Sum_probs=64.8
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.= + ..+.+++.+.++++.. .
T Consensus 166 ~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq---P-----~~~~~~~~~~~l~~~~--~ 235 (368)
T 3q45_A 166 SKELDVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHCEE---P-----VSRNLYTALPKIRQAC--R 235 (368)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCEEC---C-----BCGGGGGGHHHHHHTC--S
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEEEC---C-----CChhHHHHHHHHHhhC--C
Confidence 4555667888888886 577777643 45544 45566677776641 0 0122455677777765 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||++++.+.+..|+.+++..| +|.|++--
T Consensus 236 iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~ 266 (368)
T 3q45_A 236 IPIMADESCCNSFDAERLIQIQACDSFNLKL 266 (368)
T ss_dssp SCEEESTTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred CCEEEcCCcCCHHHHHHHHHcCCCCeEEech
Confidence 9999999999999999999986 79998764
No 362
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=92.76 E-value=0.48 Score=40.83 Aligned_cols=91 Identities=12% Similarity=0.033 Sum_probs=63.8
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cC----HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LT----AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~----~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++++|+.+ ++++.+... .+ .+.++.+.+.|++.|.= + ..+.+++.+.++++.. .+|
T Consensus 175 ~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~--~ip 244 (377)
T 3my9_A 175 AEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQ---P-----VPRRHLDAMAGFAAAL--DTP 244 (377)
T ss_dssp HHHHHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCCSCEEC---C-----SCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEEEC---C-----CCccCHHHHHHHHHhC--CCC
Confidence 34556788888775 567777643 22 24456666777776641 0 0122466777887776 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
|+++..+.+..|+.+++..| +|.|++--.
T Consensus 245 Ia~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 274 (377)
T 3my9_A 245 ILADESCFDAVDLMEVVRRQAADAISVKIM 274 (377)
T ss_dssp EEESTTCSSHHHHHHHHHHTCCSEEECCHH
T ss_pred EEECCccCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999999999987 899987643
No 363
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=92.70 E-value=0.14 Score=41.82 Aligned_cols=41 Identities=17% Similarity=0.115 Sum_probs=36.6
Q ss_pred cHHHHHHHHHhc-CCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT-KLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~-~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++|+.+ +.|+++... .+++.++.+.+ |+|+|+|++
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGS 215 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGD 215 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECC
Confidence 678999999998 899999964 79999999887 999999965
No 364
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=92.68 E-value=1.6 Score=36.55 Aligned_cols=129 Identities=17% Similarity=0.166 Sum_probs=71.1
Q ss_pred HHHHHHHHHhcCCCEEEEecc--CH----HHHHHHHHcCCcEEEeeccCcCC-CCCccchHHHHHHHHHHhCCCcEEEEe
Q psy16780 53 WSDVTWLKTITKLPIVLKGIL--TA----EDAKIGVEMGASAIMVSNHGGRQ-LDYVPASIEALPEIAKAVGHKVDVYLD 125 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~--~~----~~a~~l~~aG~d~I~v~~~gg~~-~~~~~~~~~~l~~i~~~~~~~ipiia~ 125 (202)
.+.++++. .++.||++|-.. ++ ..++.+.+.|-+-|++.-.|-+- ...-..++..+..+++.. ..+||+.+
T Consensus 124 ~~LLr~va-~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~-~~~pV~~D 201 (285)
T 3sz8_A 124 TDLVVAIA-KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETT-GGCPVIFD 201 (285)
T ss_dssp HHHHHHHH-HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHT-TSCCEEEE
T ss_pred HHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhC-CCCCEEEe
Confidence 45677766 469999999753 54 33566778898878775443211 111123566777777665 24899985
Q ss_pred ---------------cCCCCH--HHHHHHHHhCCCEEEEcHHHHHHh-hhcChHHH-HHHHHHHHHHHHHHHHHhCC
Q psy16780 126 ---------------GGVRYG--TDVFKALALGAKMVFVGRPALWGL-AHSGKSGV-RKVLDILINEFDQALALSGC 183 (202)
Q Consensus 126 ---------------GGI~~~--~D~~kal~~GAd~V~ig~~~l~~~-~~~G~~~v-~~~i~~l~~~L~~~m~~~G~ 183 (202)
||-|.. .-...|+++|||+++|=..+--.- .+.++..+ -+-++.+.++++.+-...|.
T Consensus 202 ~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i~~i~~~lg~ 278 (285)
T 3sz8_A 202 VTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQMKAIDDLVKR 278 (285)
T ss_dssp TTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHHHHHHHHHTT
T ss_pred CCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHHHHHHHHhCC
Confidence 232221 234567789999888866433110 12332100 02234555566666666664
No 365
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=92.57 E-value=0.14 Score=41.53 Aligned_cols=70 Identities=19% Similarity=0.282 Sum_probs=51.5
Q ss_pred cCHHHHHHHHHcCCcEEEeecc---CcCCCCCccchHHHHHHHH---HHhCCCcEEEE-----ecCCCCH--------HH
Q psy16780 73 LTAEDAKIGVEMGASAIMVSNH---GGRQLDYVPASIEALPEIA---KAVGHKVDVYL-----DGGVRYG--------TD 133 (202)
Q Consensus 73 ~~~~~a~~l~~aG~d~I~v~~~---gg~~~~~~~~~~~~l~~i~---~~~~~~ipiia-----~GGI~~~--------~D 133 (202)
.+.+++..+.+.|||.|.+... ||+ .|+...+..++ +.+ ++||.+ .|++... +|
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L~~GGl-----TPS~g~i~~~~~~~~~~--~ipV~vMIRPR~GdF~Ys~~E~~~M~~D 81 (224)
T 2bdq_A 9 ENLTDLTRLDKAIISRVELCDNLAVGGT-----TPSYGVIKEANQYLHEK--GISVAVMIRPRGGNFVYNDLELRIMEED 81 (224)
T ss_dssp ETTTTGGGCCTTTCCEEEEEBCGGGTCB-----CCCHHHHHHHHHHHHHT--TCEEEEECCSSSSCSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCcccCCc-----CCCHHHHHHHHHhhhhc--CCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 5788899999999999999763 332 45666677766 666 789887 4555433 36
Q ss_pred HHHHHHhCCCEEEEcH
Q psy16780 134 VFKALALGAKMVFVGR 149 (202)
Q Consensus 134 ~~kal~~GAd~V~ig~ 149 (202)
+..+..+|||+|.+|-
T Consensus 82 i~~~~~~GadGvV~G~ 97 (224)
T 2bdq_A 82 ILRAVELESDALVLGI 97 (224)
T ss_dssp HHHHHHTTCSEEEECC
T ss_pred HHHHHHcCCCEEEEee
Confidence 6667779999999985
No 366
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=92.55 E-value=0.33 Score=42.05 Aligned_cols=92 Identities=9% Similarity=0.103 Sum_probs=64.2
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.= + ..+.+++.+.++++.. .
T Consensus 195 ~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEe---P-----~~~~d~~~~~~l~~~~--~ 264 (383)
T 3toy_A 195 DLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWIEE---P-----VPQENLSGHAAVRERS--E 264 (383)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC---C-----SCTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC---C-----CCcchHHHHHHHHhhc--C
Confidence 3445566788888875 567777643 45444 35556677766641 0 0122566778887776 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+||+++..+.+..|+.+++..| +|.|++--
T Consensus 265 iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 265 IPIQAGENWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp SCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred CCEEeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999999987 78888753
No 367
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.54 E-value=0.75 Score=40.16 Aligned_cols=87 Identities=10% Similarity=0.011 Sum_probs=64.7
Q ss_pred ccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCC
Q psy16780 49 ETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGV 128 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI 128 (202)
+.--++.+.+.++..++|++- .+++.+.+..+.+.|+|.+.|..+. ..++..|+.+++ ...|||.+-|.
T Consensus 99 ~~e~~~~L~~~~~~~Gi~~~s-tpfD~~svd~l~~~~vd~~KIgS~~-------~~N~pLL~~va~---~gKPViLStGm 167 (385)
T 1vli_A 99 PAEWILPLLDYCREKQVIFLS-TVCDEGSADLLQSTSPSAFKIASYE-------INHLPLLKYVAR---LNRPMIFSTAG 167 (385)
T ss_dssp CGGGHHHHHHHHHHTTCEEEC-BCCSHHHHHHHHTTCCSCEEECGGG-------TTCHHHHHHHHT---TCSCEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCcEEE-ccCCHHHHHHHHhcCCCEEEECccc-------ccCHHHHHHHHh---cCCeEEEECCC
Confidence 333456777777788988774 5689999999999999999996532 235566666643 37999999999
Q ss_pred CCHHHHHHHHH----hCC-CEEE
Q psy16780 129 RYGTDVFKALA----LGA-KMVF 146 (202)
Q Consensus 129 ~~~~D~~kal~----~GA-d~V~ 146 (202)
.|.+++..|+. .|. +.+.
T Consensus 168 aTl~Ei~~Ave~i~~~Gn~~iiL 190 (385)
T 1vli_A 168 AEISDVHEAWRTIRAEGNNQIAI 190 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEE
T ss_pred CCHHHHHHHHHHHHHCCCCcEEE
Confidence 99999888775 376 4444
No 368
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=92.54 E-value=0.14 Score=42.57 Aligned_cols=42 Identities=17% Similarity=0.155 Sum_probs=36.9
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++|+.++.||++... .++++++.+...|+|+++|+.
T Consensus 196 ~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 196 VHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp HHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 467899999999999999854 689999989999999999964
No 369
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.50 E-value=0.23 Score=40.92 Aligned_cols=42 Identities=17% Similarity=0.098 Sum_probs=37.1
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++|+.+++||.+... .+++.++.+..+|+|+++|++
T Consensus 193 ~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 478999999988999999876 459999999999999999965
No 370
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=92.49 E-value=0.84 Score=39.34 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=60.4
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHH
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDV 134 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~ 134 (202)
.+.+.++..++|++- .+++.+.+..+.+.|+|.+.|..+. ..++..|+.+.+ ...|||.+-|..|-+++
T Consensus 82 ~L~~~~~~~Gi~~~s-t~fD~~svd~l~~~~v~~~KI~S~~-------~~N~pLL~~va~---~gKPviLstGmstl~Ei 150 (350)
T 3g8r_A 82 KLVAEMKANGFKAIC-TPFDEESVDLIEAHGIEIIKIASCS-------FTDWPLLERIAR---SDKPVVASTAGARREDI 150 (350)
T ss_dssp HHHHHHHHTTCEEEE-EECSHHHHHHHHHTTCCEEEECSSS-------TTCHHHHHHHHT---SCSCEEEECTTCCHHHH
T ss_pred HHHHHHHHcCCcEEe-ccCCHHHHHHHHHcCCCEEEECccc-------ccCHHHHHHHHh---hCCcEEEECCCCCHHHH
Confidence 445555566888774 6789999999999999999996532 235566676643 37899999999999999
Q ss_pred HHHHH----hCCCEEE
Q psy16780 135 FKALA----LGAKMVF 146 (202)
Q Consensus 135 ~kal~----~GAd~V~ 146 (202)
..++. .|.+.+.
T Consensus 151 ~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 151 DKVVSFMLHRGKDLTI 166 (350)
T ss_dssp HHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 88875 3666444
No 371
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=92.46 E-value=0.69 Score=39.85 Aligned_cols=84 Identities=10% Similarity=0.050 Sum_probs=62.6
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT 132 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~ 132 (202)
++.+.+.++..++|++- .+++.+.+..+.+.|+|.+.|..+. ..++..|+.+.+ ...|||.+-|..|-+
T Consensus 93 ~~~L~~~~~~~Gi~~~s-t~~d~~svd~l~~~~v~~~KI~S~~-------~~n~~LL~~va~---~gkPviLstGmat~~ 161 (349)
T 2wqp_A 93 EIKLKEYVESKGMIFIS-TLFSRAAALRLQRMDIPAYKIGSGE-------CNNYPLIKLVAS---FGKPIILSTGMNSIE 161 (349)
T ss_dssp HHHHHHHHHHTTCEEEE-EECSHHHHHHHHHHTCSCEEECGGG-------TTCHHHHHHHHT---TCSCEEEECTTCCHH
T ss_pred HHHHHHHHHHhCCeEEE-eeCCHHHHHHHHhcCCCEEEECccc-------ccCHHHHHHHHh---cCCeEEEECCCCCHH
Confidence 34566666667888774 6789999999999999999996532 235566666643 379999999999999
Q ss_pred HHHHHHH----hCCCEEEE
Q psy16780 133 DVFKALA----LGAKMVFV 147 (202)
Q Consensus 133 D~~kal~----~GAd~V~i 147 (202)
++..|+. .|.+.+.+
T Consensus 162 Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 162 SIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 9887775 47766554
No 372
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=92.44 E-value=0.6 Score=38.55 Aligned_cols=71 Identities=18% Similarity=0.165 Sum_probs=51.7
Q ss_pred CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 74 TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 74 ~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
++.......++||++|.|-.- ..+.+ .+.+.|..+++.+ ++||+---=|-++-++.++.++|||+|.+=-+
T Consensus 65 dp~~iA~~~~~GA~aiSVLTd--~~~F~--Gs~~~L~~vr~~v--~lPvLrKDFiid~yQI~eAr~~GADaILLI~a 135 (258)
T 4a29_A 65 DPIEYAKFMERYAVGLSITTE--EKYFN--GSYETLRKIASSV--SIPILMSDFIVKESQIDDAYNLGADTVLLIVK 135 (258)
T ss_dssp CHHHHHHHHTTTCSEEEEECC--STTTC--CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHHHTCSEEEEEGG
T ss_pred CHHHHHHHHhCCCeEEEEeCC--CCCCC--CCHHHHHHHHHhc--CCCEeeccccccHHHHHHHHHcCCCeeehHHh
Confidence 454444567899999988442 11111 2456677777766 89999988899999999999999999976433
No 373
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=92.43 E-value=0.23 Score=43.25 Aligned_cols=91 Identities=12% Similarity=-0.030 Sum_probs=66.4
Q ss_pred ccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 49 ETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
++...+.++++|+.+ ++++.+-.. .+.+++ +.+.+.|++.|.--- .+.+.+.+.++++.. .+
T Consensus 193 ~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~--------~~~~~~~~~~l~~~~--~i 262 (400)
T 4dxk_A 193 LKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTFWHEDPI--------KMDSLSSLTRYAAVS--PA 262 (400)
T ss_dssp HHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCSEEECCB--------CTTSGGGHHHHHHHC--SS
T ss_pred HHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCCEEEcCC--------CcccHHHHHHHHHhC--CC
Confidence 344567899999987 578888743 466554 455667887776210 112455677777776 89
Q ss_pred EEEEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 121 DVYLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
||+++..+.+..++.+++..| +|.|++--
T Consensus 263 PIa~dE~~~~~~~~~~~l~~~a~d~v~~d~ 292 (400)
T 4dxk_A 263 PISASETLGSRWAFRDLLETGAAGVVMLDI 292 (400)
T ss_dssp CEEECTTCCHHHHHHHHHHTTCCCEEEECT
T ss_pred CEEecCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999999997 79998853
No 374
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=92.42 E-value=2.5 Score=34.13 Aligned_cols=48 Identities=13% Similarity=0.111 Sum_probs=35.3
Q ss_pred hccCccccHHHHHHHH---HhcCCCEEEEec-------cC-------HHHHHHHHHcCCcEEEee
Q psy16780 45 SQLDETINWSDVTWLK---TITKLPIVLKGI-------LT-------AEDAKIGVEMGASAIMVS 92 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~---~~~~~Pv~vK~~-------~~-------~~~a~~l~~aG~d~I~v~ 92 (202)
.+|-...++..++.++ +.+++||.+=++ .+ .++++.+.++|+|+|+++
T Consensus 32 ~~GGlTPS~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G 96 (224)
T 2bdq_A 32 AVGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLG 96 (224)
T ss_dssp GGTCBCCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred ccCCcCCCHHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 4444455567778887 888999987554 12 256788999999999986
No 375
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=92.38 E-value=0.78 Score=39.30 Aligned_cols=90 Identities=20% Similarity=0.185 Sum_probs=62.1
Q ss_pred ccccHHHHHHHHHhc-CCCEEEEec--cC---HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 49 ETINWSDVTWLKTIT-KLPIVLKGI--LT---AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~-~~Pv~vK~~--~~---~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
|+...+.++++|+.+ ++++.+... .+ .+.++.+.+.|++.|.= .. .+.+++.+.++++.. ++||
T Consensus 173 ~~~d~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iEq------P~--~~~d~~~~~~l~~~~--~ipI 242 (375)
T 1r0m_A 173 PGWDVQPVRATREAFPDIRLTVDANSAYTLADAGRLRQLDEYDLTYIEQ------PL--AWDDLVDHAELARRI--RTPL 242 (375)
T ss_dssp TTBSHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHTTGGGCCSCEEC------CS--CTTCSHHHHHHHHHC--SSCE
T ss_pred hHHHHHHHHHHHHHcCCCeEEEeCCCCCCHHHHHHHHHHHhCCCcEEEC------CC--CcccHHHHHHHHHhC--CCCE
Confidence 455677888888876 567777632 23 23334445566665541 00 123556677777776 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
++++.+.+..|+.+++..| +|.|++-
T Consensus 243 a~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 243 CLDESVASASDARKALALGAGGVINLK 269 (375)
T ss_dssp EESTTCCSHHHHHHHHHHTSCSEEEEC
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEEC
Confidence 9999999999999999987 8999883
No 376
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=92.31 E-value=1.6 Score=37.78 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 105 SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 105 ~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+++.+..+++.+ ++||+.- |+.+.+++.++..+|||+|.++
T Consensus 213 ~~~~i~~i~~~~--~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 213 NWEALRWLRDLW--PHKLLVK-GLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CHHHHHHHHHHC--CSEEEEE-EECCHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHhc--CCCEEEE-ecCcHHHHHHHHHcCCCEEEEc
Confidence 455677777776 7999875 5899999999999999999994
No 377
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=92.12 E-value=0.95 Score=38.62 Aligned_cols=91 Identities=12% Similarity=0.113 Sum_probs=62.2
Q ss_pred ccccHHHHHHHHHhc-CCCEEEEec--cC---HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 49 ETINWSDVTWLKTIT-KLPIVLKGI--LT---AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~-~~Pv~vK~~--~~---~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
|+...+.++++|+.+ ++++.+-.. .+ .+.++.+.+.|++.|.= + . .+.+++.+.++++.. ++||
T Consensus 166 ~~~d~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~ipI 235 (369)
T 2zc8_A 166 PGWDYEVLKAVREAFPEATLTADANSAYSLANLAQLKRLDELRLDYIEQ---P---L--AYDDLLDHAKLQREL--STPI 235 (369)
T ss_dssp TTBSHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHGGGGGCCSCEEC---C---S--CTTCSHHHHHHHHHC--SSCE
T ss_pred hhHHHHHHHHHHHHcCCCeEEEecCCCCCHHHHHHHHHHHhCCCcEEEC---C---C--CcccHHHHHHHHhhC--CCCE
Confidence 455677788888776 567777532 23 23344445566665541 0 0 122456677777766 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+++..+.+..|+.+++..| +|.|++--
T Consensus 236 a~dE~~~~~~~~~~~i~~~~~d~v~ik~ 263 (369)
T 2zc8_A 236 CLDESLTGAEKARKAIELGAGRVFNVKP 263 (369)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred EEcCccCCHHHHHHHHHhCCCCEEEEch
Confidence 9999999999999999988 89999843
No 378
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=92.10 E-value=0.52 Score=38.42 Aligned_cols=78 Identities=13% Similarity=-0.006 Sum_probs=49.1
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHH
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDV 134 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~ 134 (202)
.+..+.+..++|++|- -.. ..+.+.|+|+|.+.... . + ..++++.++....|-++ ++|.+++
T Consensus 87 ~l~~l~~~~~~~liIn--d~~---~lA~~~gAdGVHLg~~d-------l-~---~~~~r~~~~~~~~iG~S--~ht~~Ea 148 (243)
T 3o63_A 87 ILADAAHRYGALFAVN--DRA---DIARAAGADVLHLGQRD-------L-P---VNVARQILAPDTLIGRS--THDPDQV 148 (243)
T ss_dssp HHHHHHHHTTCEEEEE--SCH---HHHHHHTCSEEEECTTS-------S-C---HHHHHHHSCTTCEEEEE--ECSHHHH
T ss_pred HHHHHHHhhCCEEEEe--CHH---HHHHHhCCCEEEecCCc-------C-C---HHHHHHhhCCCCEEEEe--CCCHHHH
Confidence 3444445568998874 223 33667899999884321 1 1 12333434333333333 6999999
Q ss_pred HHHHHhCCCEEEEcHH
Q psy16780 135 FKALALGAKMVFVGRP 150 (202)
Q Consensus 135 ~kal~~GAd~V~ig~~ 150 (202)
.++...|||.|.+|..
T Consensus 149 ~~A~~~GaDyI~vgpv 164 (243)
T 3o63_A 149 AAAAAGDADYFCVGPC 164 (243)
T ss_dssp HHHHHSSCSEEEECCS
T ss_pred HHHhhCCCCEEEEcCc
Confidence 9999999999999863
No 379
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=92.08 E-value=2 Score=34.34 Aligned_cols=111 Identities=21% Similarity=0.284 Sum_probs=68.7
Q ss_pred HHHHHHHHHhcCCCEEEEec-cC----HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecC
Q psy16780 53 WSDVTWLKTITKLPIVLKGI-LT----AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGG 127 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~-~~----~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GG 127 (202)
.+.+++|.+.++.||.+=.. .+ .+.++++.+.+ +.+.+- .|.+++.++.++......+++-++-
T Consensus 41 ~~~~~eI~~~v~G~Vs~EV~a~d~e~mi~ea~~l~~~~-~nv~IK---------IP~T~eGl~A~~~L~~~GI~vn~Tl- 109 (212)
T 3r8r_A 41 HDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAKIA-PNITVK---------IPMTSDGLKAVRALTDLGIKTNVTL- 109 (212)
T ss_dssp HHHHHHHHHHCCSCEEEECCCSSHHHHHHHHHHHHTTC-TTEEEE---------EESSHHHHHHHHHHHHTTCCEEEEE-
T ss_pred HHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHHHhC-CCEEEE---------eCCCHHHHHHHHHHHHCCCcEEEEE-
Confidence 57899999999899987543 22 35677777765 333331 2556666665544333357777654
Q ss_pred CCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhC
Q psy16780 128 VRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILINEFDQALALSG 182 (202)
Q Consensus 128 I~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~~~L~~~m~~~G 182 (202)
|.|..+++.|..+||+.|. ||+-.+...|.+++. +..++..+....|
T Consensus 110 ifS~~Qa~~Aa~AGa~yIS---PfvgRi~d~~~dG~~-----~v~~i~~~~~~~~ 156 (212)
T 3r8r_A 110 IFNANQALLAARAGATYVS---PFLGRLDDIGHNGLD-----LISEVKQIFDIHG 156 (212)
T ss_dssp ECSHHHHHHHHHHTCSEEE---EBHHHHHHTTSCHHH-----HHHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHcCCeEEE---eccchhhhcCCChHH-----HHHHHHHHHHHcC
Confidence 8999999999999999874 333322233445542 2344444555555
No 380
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=92.04 E-value=0.41 Score=39.78 Aligned_cols=90 Identities=16% Similarity=0.107 Sum_probs=53.3
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEE-ecCCCCHHHHHH----HHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYL-DGGVRYGTDVFK----ALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia-~GGI~~~~D~~k----al~~GAd~V~ig~~ 150 (202)
..++.+++. +|++.+.|+.|... .-+.+--.++.+.+..++|||+ .|+..+ .++++ +-++|||++++-.|
T Consensus 23 ~lv~~li~~-v~gl~v~GttGE~~---~Ls~~Er~~v~~~~~~rvpviaGvg~~~t-~~ai~la~~A~~~Gadavlv~~P 97 (283)
T 2pcq_A 23 ELAQALEPL-VDGLLVYGSNGEGV---HLTPEERARGLRALRPRKPFLVGLMEETL-PQAEGALLEAKAAGAMALLATPP 97 (283)
T ss_dssp HHHHHHGGG-SSCCEETCTTTTGG---GSCHHHHHHHHHTCCCSSCCEEEECCSSH-HHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHhh-CCEEEECCcCcCch---hcCHHHHHHHHHHHHhCCcEEEeCCCCCH-HHHHHHHHHHHhcCCCEEEecCC
Confidence 345667888 99999977655321 1122323333333323899887 444444 44433 33479999999999
Q ss_pred HHHHhhhcChHHHHHHHHHHHH
Q psy16780 151 ALWGLAHSGKSGVRKVLDILIN 172 (202)
Q Consensus 151 ~l~~~~~~G~~~v~~~i~~l~~ 172 (202)
+++.. ...+++.++++.+.+
T Consensus 98 ~y~~~--~~~~~l~~~f~~va~ 117 (283)
T 2pcq_A 98 RYYHG--SLGAGLLRYYEALAE 117 (283)
T ss_dssp CTTGG--GTTTHHHHHHHHHHH
T ss_pred cCCCC--CCHHHHHHHHHHHhc
Confidence 87532 134666666666544
No 381
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=91.98 E-value=0.36 Score=42.70 Aligned_cols=89 Identities=8% Similarity=-0.077 Sum_probs=65.5
Q ss_pred ccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 51 INWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 51 ~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
...+.++++|+.+ ++++.+... .+.+++ +.+.+.|++.|.= + . .+.+++.+.++++.. .+||
T Consensus 225 ~d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe---P---~--~~~d~~~~~~l~~~~--~iPI 294 (440)
T 3t6c_A 225 SIPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLED---P---V--APENTEWLKMLRQQS--STPI 294 (440)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC---S---S--CGGGGGGHHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEEC---C---C--ChhhHHHHHHHHhhc--CCCE
Confidence 3466899999987 678998854 466554 4556677777741 0 0 122456677887776 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
+++..+.+..|+.+++..| +|.|++--
T Consensus 295 a~dE~~~~~~~~~~~i~~~a~d~v~~k~ 322 (440)
T 3t6c_A 295 AMGELFVNVNEWKPLIDNKLIDYIRCHI 322 (440)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred EeCcccCCHHHHHHHHHcCCccceeech
Confidence 9999999999999999987 78888754
No 382
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=91.98 E-value=0.26 Score=40.19 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=36.4
Q ss_pred cHHHHHHHHHhcCCCEEEEecc-CHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGIL-TAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~-~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++++.+++||++.+.. +++.+..+.++|+|++++++
T Consensus 189 ~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGS 231 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGS 231 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 4568899999889999998765 59999999999999999965
No 383
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=91.98 E-value=2.1 Score=35.66 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=62.7
Q ss_pred ccccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcC---CC-CCccchHHH-H---HHHHHHhCCCc
Q psy16780 49 ETINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGR---QL-DYVPASIEA-L---PEIAKAVGHKV 120 (202)
Q Consensus 49 ~~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~---~~-~~~~~~~~~-l---~~i~~~~~~~i 120 (202)
+..+...+++.++. +-|+.+=...+.-.|+.+.++|+|.|.++...+. .. +..+.+.+- + +.+++.. ++.
T Consensus 14 ~~~t~~~lr~~~~~-g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~-~~~ 91 (275)
T 3vav_A 14 PAVTVPKLQAMREA-GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ-PRA 91 (275)
T ss_dssp CCCCHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC-CSS
T ss_pred CCcCHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC-CCC
Confidence 34455566666554 5688776678999999999999999955422211 11 333445543 3 3343333 358
Q ss_pred EEEEec---CCCCHHHHH----HHHHhCCCEEEEc
Q psy16780 121 DVYLDG---GVRYGTDVF----KALALGAKMVFVG 148 (202)
Q Consensus 121 piia~G---GI~~~~D~~----kal~~GAd~V~ig 148 (202)
||+++- |-.++++++ +.+..||++|-+=
T Consensus 92 ~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 92 LIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp EEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 999964 456788875 4566799999873
No 384
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=91.90 E-value=0.33 Score=43.67 Aligned_cols=70 Identities=23% Similarity=0.235 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
.+.++.+.++|++.+.+....|.. ...++.+..+++..++++|++ .|++.+.+++.++..+|||++.+|.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~----~~~~~~i~~lk~~~~~~~~Vi-~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFS----EWQKITIGWIREKYGDKVKVG-AGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCS----HHHHHHHHHHHHHHGGGSCEE-EEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhhhccceEEecccCcc----cchhhHHHHHHHhCCCCceEe-eccccCHHHHHHHHHhCCCeEEecc
Confidence 455788889999999885543321 113445666666552127887 4889999999999999999998764
No 385
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.74 E-value=0.2 Score=41.58 Aligned_cols=42 Identities=17% Similarity=0.130 Sum_probs=37.1
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++|+.+++||.+... .++++++.+..+|+|+++|++
T Consensus 194 ~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 194 IENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp HHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 567899999999999999865 579999999999999999964
No 386
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=91.72 E-value=0.25 Score=42.33 Aligned_cols=94 Identities=14% Similarity=0.149 Sum_probs=65.7
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+.++ ++.+.+.|++.|.= + . .+.+++.+.++++.. .
T Consensus 166 ~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P---~--~~~d~~~~~~l~~~~--~ 235 (356)
T 3ro6_B 166 DEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFIEQ---P---F--PAGRTDWLRALPKAI--R 235 (356)
T ss_dssp CHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCCCEEC---C---S--CTTCHHHHHTSCHHH--H
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEC---C---C--CCCcHHHHHHHHhcC--C
Confidence 4555667888888876 577887743 34444 45566777777741 0 0 112456666666655 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC--CCEEEEcHHH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG--AKMVFVGRPA 151 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G--Ad~V~ig~~~ 151 (202)
+||++++.+.+..|+.+++..| +|.|++--..
T Consensus 236 iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 236 RRIAADESLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp HTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred CCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 9999999999999999999875 8999987543
No 387
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=91.72 E-value=1 Score=38.86 Aligned_cols=82 Identities=23% Similarity=0.243 Sum_probs=57.6
Q ss_pred CCCEEEEec------cCHHHHHHHHHcCCcEEEeecc-C--c-C----------------------------CC---C--
Q psy16780 64 KLPIVLKGI------LTAEDAKIGVEMGASAIMVSNH-G--G-R----------------------------QL---D-- 100 (202)
Q Consensus 64 ~~Pv~vK~~------~~~~~a~~l~~aG~d~I~v~~~-g--g-~----------------------------~~---~-- 100 (202)
+.|+++-+- .+.+.++++.++|+++++++-. + | + .+ .
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~ 211 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGA 211 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhc
Confidence 678887652 2346678889999999987642 1 1 0 00 0
Q ss_pred -CccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 101 -YVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 101 -~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
....+++.+..+++.. ++||+.=| +.+.+|+.++..+|||+|.+.
T Consensus 212 ~d~~~~~~~i~~lr~~~--~~PvivK~-v~~~e~a~~a~~~Gad~I~vs 257 (368)
T 2nli_A 212 SKQKISPRDIEEIAGHS--GLPVFVKG-IQHPEDADMAIKRGASGIWVS 257 (368)
T ss_dssp BCSBCCHHHHHHHHHHS--SSCEEEEE-ECSHHHHHHHHHTTCSEEEEC
T ss_pred cCchhhHHHHHHHHHHc--CCCEEEEc-CCCHHHHHHHHHcCCCEEEEc
Confidence 0123556677777776 78998864 789999999999999999984
No 388
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=91.70 E-value=1.6 Score=37.04 Aligned_cols=85 Identities=20% Similarity=0.090 Sum_probs=55.9
Q ss_pred hcCCCEEEEec--cCHHHH-HHHHHcCCcEEEeeccCcCCC-C-Cccc----hHHHHHHHHHHhCCCcEEEEe--cCCCC
Q psy16780 62 ITKLPIVLKGI--LTAEDA-KIGVEMGASAIMVSNHGGRQL-D-YVPA----SIEALPEIAKAVGHKVDVYLD--GGVRY 130 (202)
Q Consensus 62 ~~~~Pv~vK~~--~~~~~a-~~l~~aG~d~I~v~~~gg~~~-~-~~~~----~~~~l~~i~~~~~~~ipiia~--GGI~~ 130 (202)
..+.|+++... .+++.. +.+..+|+|+|.+........ . .+.+ .++.+.++++.+ ++||+.- |...+
T Consensus 114 ~~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~ 191 (349)
T 1p0k_A 114 NPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMS 191 (349)
T ss_dssp CSSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCC
T ss_pred CCCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCC
Confidence 35789987654 455554 445578999998864311110 0 0111 345677777766 7898885 55578
Q ss_pred HHHHHHHHHhCCCEEEEc
Q psy16780 131 GTDVFKALALGAKMVFVG 148 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~ig 148 (202)
.+++..+..+|||+|.+.
T Consensus 192 ~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 999999999999999984
No 389
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=91.59 E-value=1.3 Score=38.07 Aligned_cols=90 Identities=12% Similarity=0.120 Sum_probs=61.9
Q ss_pred HHHHHHhc-CCCEEEEec------cCHHHHHHHHHcCCcEEEeecc---Cc-CC-----------------C--------
Q psy16780 56 VTWLKTIT-KLPIVLKGI------LTAEDAKIGVEMGASAIMVSNH---GG-RQ-----------------L-------- 99 (202)
Q Consensus 56 i~~i~~~~-~~Pv~vK~~------~~~~~a~~l~~aG~d~I~v~~~---gg-~~-----------------~-------- 99 (202)
+++|.+.. +-|.+..+- .+.+.++++.++|+.+++++-. .| |. +
T Consensus 112 ~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~ 191 (352)
T 3sgz_A 112 LEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKP 191 (352)
T ss_dssp HHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC--------
T ss_pred HHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccc
Confidence 44444444 357777653 2345678899999999988631 11 10 0
Q ss_pred --------CCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 100 --------DYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 100 --------~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.....+|+.+..+++.. ++||+.-| +.+.+|+.++..+|||++.+.
T Consensus 192 ~~~~~~~~~d~~~~w~~i~~lr~~~--~~PvivK~-v~~~e~A~~a~~~GaD~I~vs 245 (352)
T 3sgz_A 192 TQSVPVLFPKASFCWNDLSLLQSIT--RLPIILKG-ILTKEDAELAMKHNVQGIVVS 245 (352)
T ss_dssp -------CCCTTCCHHHHHHHHHHC--CSCEEEEE-ECSHHHHHHHHHTTCSEEEEC
T ss_pred cchhhhhccCCCCCHHHHHHHHHhc--CCCEEEEe-cCcHHHHHHHHHcCCCEEEEe
Confidence 00124677888888876 78998854 689999999999999999984
No 390
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=91.56 E-value=0.78 Score=39.70 Aligned_cols=82 Identities=16% Similarity=0.048 Sum_probs=54.2
Q ss_pred CCCEEEEec--cCHHHHHHH-HHcCCcEEEeeccCcC---CCCC--ccchH-HHHHHHHHHhCCCcEEEEecCC---CCH
Q psy16780 64 KLPIVLKGI--LTAEDAKIG-VEMGASAIMVSNHGGR---QLDY--VPASI-EALPEIAKAVGHKVDVYLDGGV---RYG 131 (202)
Q Consensus 64 ~~Pv~vK~~--~~~~~a~~l-~~aG~d~I~v~~~gg~---~~~~--~~~~~-~~l~~i~~~~~~~ipiia~GGI---~~~ 131 (202)
+.|++.=+. .+.+.+.++ ...|+|++.+.-.... +..+ ...++ +.+.++++.+ ++||++-+ + .+.
T Consensus 144 ~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~-vg~g~s~ 220 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKE-VGFGMDV 220 (365)
T ss_dssp -CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEE-CSSCCCH
T ss_pred CCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEE-CCCCCCH
Confidence 567764332 456665554 4789999998654221 1111 11123 5677787776 79999974 6 789
Q ss_pred HHHHHHHHhCCCEEEEc
Q psy16780 132 TDVFKALALGAKMVFVG 148 (202)
Q Consensus 132 ~D~~kal~~GAd~V~ig 148 (202)
+++.++..+|||+|.++
T Consensus 221 e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 99999999999999883
No 391
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=91.55 E-value=0.28 Score=39.02 Aligned_cols=108 Identities=13% Similarity=0.056 Sum_probs=61.8
Q ss_pred HHHHHHHHhcCCCEEEEecc-CHHHHHHHHHcCCcEEEeecc-CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCH
Q psy16780 54 SDVTWLKTITKLPIVLKGIL-TAEDAKIGVEMGASAIMVSNH-GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYG 131 (202)
Q Consensus 54 ~~i~~i~~~~~~Pv~vK~~~-~~~~a~~l~~aG~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~ 131 (202)
+.++.++. ++|++-.... +.++. .+.+..+|++.+++. ||+. ..-+|..+..+.. .+.|++..||+ ++
T Consensus 88 ~~~~~l~~--~~~vika~~v~~~~~l-~~~~~~~d~~LlD~~~gGtG---~~fdW~~l~~~~~---~~~p~~LAGGL-~p 157 (203)
T 1v5x_A 88 EWAEAVGR--FYPVIKAFPLEGPARP-EWADYPAQALLLDGKRPGSG---EAYPRAWAKPLLA---TGRRVILAGGI-AP 157 (203)
T ss_dssp HHHHHHTT--TSCEEEEEECSSSCCG-GGGGSSCSEEEEECSSTTSC---CCCCGGGGHHHHH---TTSCEEECSSC-CS
T ss_pred HHHHHhcc--CCCEEEEEEcCChHhh-hhhhcCCCEEEEcCCCCCCC---CccCHHHHHhhhc---cCCcEEEECCC-CH
Confidence 45565632 5788733332 22222 333344899998864 3332 1234555544211 25799999998 67
Q ss_pred HHHHHHHHhCCCEEEEcHHHHHHhhhcChHHHHHHHHHHH
Q psy16780 132 TDVFKALALGAKMVFVGRPALWGLAHSGKSGVRKVLDILI 171 (202)
Q Consensus 132 ~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~v~~~i~~l~ 171 (202)
+.+.+++..++.+|=+.|.+=..-..+..+.+.++++.++
T Consensus 158 eNV~~ai~~~p~gVDvsSGvE~~pG~KD~~ki~~fi~~~r 197 (203)
T 1v5x_A 158 ENLEEVLALRPYALDLASGVEEAPGVKSAEKLRALFARLA 197 (203)
T ss_dssp TTHHHHHHHCCSEEEESGGGEEETTEECHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEeCCceecCCCCcCHHHHHHHHHHHH
Confidence 8888888669999999986521001123444555555443
No 392
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.47 E-value=1.2 Score=37.48 Aligned_cols=67 Identities=18% Similarity=0.102 Sum_probs=47.5
Q ss_pred HHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEe---cCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 77 DAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLD---GGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 77 ~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~---GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
-++...++|||.|-+-+ ..+.+.+.++++.+ ++|++++ +|-.-.-+..+.-++|.+.|.++...++
T Consensus 176 Ra~ay~~AGAD~if~~~---------~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~r 244 (298)
T 3eoo_A 176 RAIAYVEAGADMIFPEA---------MKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYR 244 (298)
T ss_dssp HHHHHHHTTCSEEEECC---------CCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHH
T ss_pred HHHhhHhcCCCEEEeCC---------CCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHH
Confidence 35667899999998843 34667788888888 5888663 4422223455566789999999988776
Q ss_pred H
Q psy16780 154 G 154 (202)
Q Consensus 154 ~ 154 (202)
+
T Consensus 245 a 245 (298)
T 3eoo_A 245 A 245 (298)
T ss_dssp H
T ss_pred H
Confidence 4
No 393
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=91.46 E-value=1.7 Score=36.33 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=58.0
Q ss_pred cHHHHHHHHHhcCCCEEEEecc--CHHH----HHHHHHcCCcEEEeeccCcCCCCCcc--chHHHHHHHHHHhCCCcEEE
Q psy16780 52 NWSDVTWLKTITKLPIVLKGIL--TAED----AKIGVEMGASAIMVSNHGGRQLDYVP--ASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~--~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~--~~~~~l~~i~~~~~~~ipii 123 (202)
..+.++++. .++.||++|-.. ++++ +..+...|-+-+++.-.|++. .... .++..+..+++.. ...||+
T Consensus 121 n~~Ll~~~a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~-~y~~~~~dl~~i~~lk~~~-~~~pV~ 197 (292)
T 1o60_A 121 QTDLVEAMA-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNF-GYDNLIVDMLGFSVMKKAS-KGSPVI 197 (292)
T ss_dssp CHHHHHHHH-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHHHT-TSCCEE
T ss_pred CHHHHHHHH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHhhC-CCCCEE
Confidence 355788877 569999999762 5544 345567888666665544421 1111 3556677666553 258999
Q ss_pred Ee-----------cCCCCH-----HHHH-HHHHhCCCEEEEcHHH
Q psy16780 124 LD-----------GGVRYG-----TDVF-KALALGAKMVFVGRPA 151 (202)
Q Consensus 124 a~-----------GGI~~~-----~D~~-kal~~GAd~V~ig~~~ 151 (202)
.+ |+-..+ ..+. .++++||++++|=+-+
T Consensus 198 ~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 198 FDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHP 242 (292)
T ss_dssp EEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEES
T ss_pred EECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecC
Confidence 83 222233 2333 5667899999998755
No 394
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.42 E-value=1.2 Score=37.06 Aligned_cols=63 Identities=21% Similarity=0.258 Sum_probs=46.4
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEec--CCCCHHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDG--GVRYGTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~G--GI~~~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
++.+.++|+|.|.+-+ .++.+.+.++.+.+ ++|+.... +..+ +.+.-++|.+.|.++...++.
T Consensus 174 a~ay~eAGAd~i~~e~---------~~~~~~~~~i~~~~--~~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 174 GQAYADAGADGIFVPL---------ALQSQDIRALADAL--RVPLNVMAFPGSPV---PRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp HHHHHHTTCSEEECTT---------CCCHHHHHHHHHHC--SSCEEEECCTTSCC---HHHHHHTTCSEEECTTHHHHH
T ss_pred HHHHHHCCCCEEEECC---------CCCHHHHHHHHHhc--CCCEEEecCCCCCC---HHHHHHcCCcEEEEChHHHHH
Confidence 5677899999998843 35567778888888 67876653 3344 455567999999999887764
No 395
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=91.40 E-value=2.8 Score=35.99 Aligned_cols=126 Identities=14% Similarity=0.117 Sum_probs=72.8
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHH----HHHHHcCCcEEEeeccCcCCCCC--ccchHHHHHHHHHHhCCCcEEEE
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDA----KIGVEMGASAIMVSNHGGRQLDY--VPASIEALPEIAKAVGHKVDVYL 124 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~--~~~~~~~l~~i~~~~~~~ipiia 124 (202)
.+..|+++.+ ++.||++|-- .|.++. +.+.+.|.+.+.+.+. +.... ...++..++.+++.+ +.+||..
T Consensus 137 n~~LL~~va~-~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~--s~Yp~~~~~~nL~ai~~lk~~f-~~lpVg~ 212 (349)
T 2wqp_A 137 NYPLIKLVAS-FGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCT--NIYPTPYEDVRLGGMNDLSEAF-PDAIIGL 212 (349)
T ss_dssp CHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECC--CCSSCCGGGCCTHHHHHHHHHC-TTSEEEE
T ss_pred CHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecc--CCCCCChhhcCHHHHHHHHHHC-CCCCEEe
Confidence 3567777765 5899999965 455553 4455678766666432 12211 122455677776654 2489987
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhhhcChHH---H-HHHHHHHHHHHHHHHHHhCC
Q psy16780 125 DGGVRYGTDVFKALALGAKMVFVGRPALWGLAHSGKSG---V-RKVLDILINEFDQALALSGC 183 (202)
Q Consensus 125 ~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~---v-~~~i~~l~~~L~~~m~~~G~ 183 (202)
++-=....-...|+++||+.+- +.|--.-...|.++ + -+-+..|.++++..-..+|.
T Consensus 213 sdHt~G~~~~~AAvAlGA~iIE--kH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 213 SDHTLDNYACLGAVALGGSILE--RHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp ECCSSSSHHHHHHHHHTCCEEE--EEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCcHHHHHHHHHhCCCEEE--eCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 7644345556677889999443 22211101123211 0 13456777888888888885
No 396
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=91.28 E-value=1.6 Score=36.79 Aligned_cols=90 Identities=16% Similarity=0.121 Sum_probs=63.5
Q ss_pred CccccHHHHHHHHHhc-CCCEEEEec--cCHHH----HHHHHHcCCc--EEEeeccCcCCCCCccchHHHHHHHHHHhCC
Q psy16780 48 DETINWSDVTWLKTIT-KLPIVLKGI--LTAED----AKIGVEMGAS--AIMVSNHGGRQLDYVPASIEALPEIAKAVGH 118 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~-~~Pv~vK~~--~~~~~----a~~l~~aG~d--~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~ 118 (202)
+++...+.++++|+.- ++++.+-.. .+.++ ++.+.+.|++ .+.= .. .+.+++.+.++++.+
T Consensus 165 ~~~~d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE~------P~--~~~~~~~~~~l~~~~-- 234 (345)
T 2zad_A 165 NLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQ------PV--RREDIEGLKFVRFHS-- 234 (345)
T ss_dssp CHHHHHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEEC------CS--CTTCHHHHHHHHHHS--
T ss_pred CHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeeeC------CC--CcccHHHHHHHHHhC--
Confidence 4455567888888772 356665422 34444 4566778887 6531 00 123566778887776
Q ss_pred CcEEEEecCCCCHHHHHHHHHhC-CCEEEE
Q psy16780 119 KVDVYLDGGVRYGTDVFKALALG-AKMVFV 147 (202)
Q Consensus 119 ~ipiia~GGI~~~~D~~kal~~G-Ad~V~i 147 (202)
++||++++.+.+..++.+++..| +|.|++
T Consensus 235 ~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 235 PFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp SSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 79999999999999999999987 899999
No 397
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=91.28 E-value=0.44 Score=41.93 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=64.3
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++.+|+.+ ++++.+... .+.+++ +.+.+.|++.|.= + ..+.+++.+.++++.+. .
T Consensus 224 ~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~~-~ 294 (441)
T 2hxt_A 224 NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEE---P-----TSPDDVLGHAAIRQGIT-P 294 (441)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCEEC---C-----SCTTCHHHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeC---C-----CCHHHHHHHHHHHhhCC-C
Confidence 4555677888888876 577877643 455554 3445566665531 0 01235667777777662 5
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
+||++++.+.+..++.+++..| +|+|++-
T Consensus 295 iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 295 VPVSTGEHTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp SCEEECTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred CCEEEeCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999999999999987 7999874
No 398
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=91.20 E-value=0.68 Score=36.91 Aligned_cols=92 Identities=14% Similarity=0.011 Sum_probs=59.8
Q ss_pred cccHHHHHHHHHhcCCCEEEEec-cC-HHHHHHHHHcCCcEEEeeccCcCCCCCccch-HHHHHHHHHHhCCCcEEEEec
Q psy16780 50 TINWSDVTWLKTITKLPIVLKGI-LT-AEDAKIGVEMGASAIMVSNHGGRQLDYVPAS-IEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~~Pv~vK~~-~~-~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipiia~G 126 (202)
.+..+.++++++.++.|+.+-+- .+ .+.++.+.++|+|+|+++.. .. ... ...++.+++. .+.++.+=
T Consensus 50 ~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~--~~----~~~~~~~~~~i~~~---g~~igv~~ 120 (228)
T 1h1y_A 50 TIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIE--VS----RDNWQELIQSIKAK---GMRPGVSL 120 (228)
T ss_dssp CBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGG--GC----TTTHHHHHHHHHHT---TCEEEEEE
T ss_pred hhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCC--Cc----ccHHHHHHHHHHHc---CCCEEEEE
Confidence 33468999999988777775543 33 34588888899999999542 11 112 2344554332 45555544
Q ss_pred CCCCHHHHHHHHHh---CCCEEEEcHH
Q psy16780 127 GVRYGTDVFKALAL---GAKMVFVGRP 150 (202)
Q Consensus 127 GI~~~~D~~kal~~---GAd~V~ig~~ 150 (202)
.-.++.+..+.+.. ++|.|.+++.
T Consensus 121 ~p~t~~e~~~~~~~~~~~~d~vl~~sv 147 (228)
T 1h1y_A 121 RPGTPVEEVFPLVEAENPVELVLVMTV 147 (228)
T ss_dssp CTTSCGGGGHHHHHSSSCCSEEEEESS
T ss_pred eCCCCHHHHHHHHhcCCCCCEEEEEee
Confidence 55677666777766 9999999653
No 399
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=91.17 E-value=2.1 Score=34.53 Aligned_cols=86 Identities=19% Similarity=0.210 Sum_probs=59.7
Q ss_pred HHHHHHHHHhcCCCEEEEec-cC----HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecC
Q psy16780 53 WSDVTWLKTITKLPIVLKGI-LT----AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGG 127 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~-~~----~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GG 127 (202)
.+.+++|.+.++.||.+-.. .+ .+.++.+.+.+- -+.+- .|.+++.++.++......+++-++-
T Consensus 43 ~~~~~ei~~~v~G~Vs~EV~a~d~e~mi~eA~~L~~~~~-nv~IK---------IP~T~eGl~A~~~L~~~GI~vn~Tl- 111 (223)
T 3s1x_A 43 GDIIREILKIVDGPVSVEVVSTKYEGMVEEARKIHGLGD-NAVVK---------IPMTEDGLRAIKTLSSEHINTNCTL- 111 (223)
T ss_dssp HHHHHHHHHHCSSCEEEECCCCSHHHHHHHHHHHHHTCT-TEEEE---------EESSHHHHHHHHHHHHTTCCEEEEE-
T ss_pred HHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHHHHHhCC-CEEEE---------eCCCHHHHHHHHHHHHCCCcEEEEE-
Confidence 46889999988889998654 22 466788888763 33331 2556666666544333357777654
Q ss_pred CCCHHHHHHHHHhCCCEEE--EcH
Q psy16780 128 VRYGTDVFKALALGAKMVF--VGR 149 (202)
Q Consensus 128 I~~~~D~~kal~~GAd~V~--ig~ 149 (202)
|.|..+++.|..+||+.|. +||
T Consensus 112 ifS~~QA~~Aa~AGa~yISPfvgR 135 (223)
T 3s1x_A 112 VFNPIQALLAAKAGVTYVSPFVGR 135 (223)
T ss_dssp ECSHHHHHHHHHTTCSEEEEBSHH
T ss_pred eCCHHHHHHHHHcCCeEEEeecch
Confidence 8999999999999999874 444
No 400
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=91.12 E-value=0.99 Score=34.98 Aligned_cols=65 Identities=22% Similarity=0.179 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
+.++.+.+.|++.|.++... +...+.+..+++.++.+. ++..|-+.+.+++..+...|||++ ++.
T Consensus 26 ~~~~~~~~~G~~~iev~~~~-------~~~~~~i~~ir~~~~~~~-~ig~~~v~~~~~~~~a~~~Gad~i-v~~ 90 (205)
T 1wa3_A 26 EKALAVFEGGVHLIEITFTV-------PDADTVIKELSFLKEKGA-IIGAGTVTSVEQCRKAVESGAEFI-VSP 90 (205)
T ss_dssp HHHHHHHHTTCCEEEEETTS-------TTHHHHHHHTHHHHHTTC-EEEEESCCSHHHHHHHHHHTCSEE-ECS
T ss_pred HHHHHHHHCCCCEEEEeCCC-------hhHHHHHHHHHHHCCCCc-EEEecccCCHHHHHHHHHcCCCEE-EcC
Confidence 44677888999999885421 112344666666553234 455566889999999999999999 654
No 401
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=91.06 E-value=1 Score=38.02 Aligned_cols=66 Identities=18% Similarity=0.155 Sum_probs=44.1
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEE---ecCCCCHHHHHHHHHhCCCEEEEcHHHHH
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYL---DGGVRYGTDVFKALALGAKMVFVGRPALW 153 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia---~GGI~~~~D~~kal~~GAd~V~ig~~~l~ 153 (202)
++...++|+|.|-+-+ .++.+.+.++++.++ .+|+.+ .||-...-.+.+.-++|.+.|..+..+++
T Consensus 184 a~ay~eAGAD~ifi~~---------~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~r 252 (307)
T 3lye_A 184 LRAARDEGADVGLLEG---------FRSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLA 252 (307)
T ss_dssp HHHHHHTTCSEEEECC---------CSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHH
T ss_pred HHHHHHCCCCEEEecC---------CCCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHH
Confidence 4667899999998843 345667788888774 367654 34422122345555789999999886665
No 402
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=90.95 E-value=3 Score=35.97 Aligned_cols=65 Identities=22% Similarity=0.172 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
.+.++.+.++|+|.|.++-.. ..+.+++.++++.. ++|++++-- +++.-+.+++..|+|.+=+--
T Consensus 49 v~Qi~~l~~aG~diVRvavp~-------~~~a~al~~I~~~~--~vPlvaDiH-f~~~lal~a~e~G~dklRINP 113 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRVAVPH-------KEDVEALEEIVKKS--PMPVIADIH-FAPSYAFLSMEKGVHGIRINP 113 (366)
T ss_dssp HHHHHHHHHTTCCEEEEECCS-------HHHHHHHHHHHHHC--SSCEEEECC-SCHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEeCCCC-------hHHHHHHHHHHhcC--CCCEEEeCC-CCHHHHHHHHHhCCCeEEECC
Confidence 567889999999999995421 23456788888877 899999643 778889999999999987754
No 403
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=90.80 E-value=1.2 Score=38.65 Aligned_cols=89 Identities=7% Similarity=-0.011 Sum_probs=65.7
Q ss_pred cHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEE
Q psy16780 52 NWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipii 123 (202)
..+.++++|+.+ ++++.+... .++++ ++.+.+.|+..+.= + ..+.+++.+.++++.+ .+||+
T Consensus 185 ~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEe---P-----~~~~d~~~~~~l~~~~--~iPIa 254 (388)
T 3tcs_A 185 TEEIIPTMRRELGDDVDLLIDANSCYTPDRAIEVGHMLQDHGFCHFEE---P-----CPYWELAQTKQVTDAL--DIDVT 254 (388)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHHHTTCCEEEC---C-----SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCeEEEC---C-----CCccCHHHHHHHHHhc--CCCEE
Confidence 457889999986 678888754 45554 45667788877641 0 0122566778887776 79999
Q ss_pred EecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 124 LDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 124 a~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
++..+.+..|+.+++..| +|.|++--.
T Consensus 255 ~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 255 GGEQDCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp ECTTCCCHHHHHHHHHHTCCSEECCCHH
T ss_pred cCCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 999999999999999986 789887643
No 404
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=90.79 E-value=1 Score=37.78 Aligned_cols=71 Identities=20% Similarity=0.161 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHHHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPALWG 154 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~l~~ 154 (202)
+.++.+.++|||.|.+-+ +.++.+.+.++.+.+..++|++++-.-...-+..+.-++| .+.|.++...+++
T Consensus 170 ~Ra~ay~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~ra 241 (290)
T 2hjp_A 170 RRGQAYEEAGADAILIHS--------RQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRA 241 (290)
T ss_dssp HHHHHHHHTTCSEEEECC--------CCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHH
T ss_pred HHHHHHHHcCCcEEEeCC--------CCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHH
Confidence 446778999999999843 1345566788888885559999742100122345556789 9999999987764
No 405
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=90.76 E-value=2.4 Score=36.54 Aligned_cols=83 Identities=18% Similarity=0.140 Sum_probs=53.8
Q ss_pred cCCCEEEEec-------cCHHHHHHHH-HcCCcEEEeeccCcC---CCCCc--c--chHHHHHHHHHHhCCCcEEEEe--
Q psy16780 63 TKLPIVLKGI-------LTAEDAKIGV-EMGASAIMVSNHGGR---QLDYV--P--ASIEALPEIAKAVGHKVDVYLD-- 125 (202)
Q Consensus 63 ~~~Pv~vK~~-------~~~~~a~~l~-~aG~d~I~v~~~gg~---~~~~~--~--~~~~~l~~i~~~~~~~ipiia~-- 125 (202)
-+.|++.-+. .+++.++++. ..+++++.++-.... +..+. . ..++.+..+++.+ ++||++-
T Consensus 118 p~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~--~vPVivK~v 195 (368)
T 3vkj_A 118 PTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKEL--SVPIIVKES 195 (368)
T ss_dssp SSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC--SSCEEEECS
T ss_pred cCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHc--CCCEEEEeC
Confidence 3688876432 2467776644 357777776532110 00111 1 1455677776665 7999995
Q ss_pred cCCCCHHHHHHHHHhCCCEEEE
Q psy16780 126 GGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 126 GGI~~~~D~~kal~~GAd~V~i 147 (202)
|+-.+++++.++..+|||+|.+
T Consensus 196 G~g~s~~~A~~l~~aGad~I~V 217 (368)
T 3vkj_A 196 GNGISMETAKLLYSYGIKNFDT 217 (368)
T ss_dssp SSCCCHHHHHHHHHTTCCEEEC
T ss_pred CCCCCHHHHHHHHhCCCCEEEE
Confidence 6557999999999999999988
No 406
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=90.72 E-value=0.35 Score=40.12 Aligned_cols=41 Identities=20% Similarity=0.064 Sum_probs=35.4
Q ss_pred ccHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 51 INWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 51 ~~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
...+.++++|+.+++||++... .+++.++.+ .|+|+++|++
T Consensus 189 ~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 189 EVKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred cHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 3467899999999999999965 569999997 9999999965
No 407
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=90.64 E-value=1.4 Score=36.85 Aligned_cols=92 Identities=15% Similarity=0.076 Sum_probs=0.0
Q ss_pred cHHHHHHHHHhcCCCEEEEeccC------HHHHHHHHHcCC------cEEEeeccCcCCCCCcc-chHHHHHHHHHHhCC
Q psy16780 52 NWSDVTWLKTITKLPIVLKGILT------AEDAKIGVEMGA------SAIMVSNHGGRQLDYVP-ASIEALPEIAKAVGH 118 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~~------~~~a~~l~~aG~------d~I~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~ 118 (202)
..+.++++. .++.||++|-... ...++.+.+.|. +-|++.-.|-+-..... .++..+..+++ .
T Consensus 120 n~~LLr~~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~-- 195 (288)
T 3tml_A 120 QTDFIHACA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRE-T-- 195 (288)
T ss_dssp CHHHHHHHH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGG-G--
T ss_pred CHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHh-c--
Q ss_pred CcEEEEe---------------cCCCCHH--HHHHHHHhCCCEEEE
Q psy16780 119 KVDVYLD---------------GGVRYGT--DVFKALALGAKMVFV 147 (202)
Q Consensus 119 ~ipiia~---------------GGI~~~~--D~~kal~~GAd~V~i 147 (202)
.+||+.+ ||-|... -...|+++|||+++|
T Consensus 196 ~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~i 241 (288)
T 3tml_A 196 NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFM 241 (288)
T ss_dssp SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEE
T ss_pred CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEE
No 408
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=90.63 E-value=1 Score=38.60 Aligned_cols=88 Identities=18% Similarity=0.142 Sum_probs=55.6
Q ss_pred CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCC------C-------ccchHHHHHHHH---HHhCCCcEEEEecC
Q psy16780 64 KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLD------Y-------VPASIEALPEIA---KAVGHKVDVYLDGG 127 (202)
Q Consensus 64 ~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~------~-------~~~~~~~l~~i~---~~~~~~ipiia~GG 127 (202)
++++-+=.+++...+..+.++|+..|...- ||-.| + .-+....+.++. +..+.+.-|++. .
T Consensus 154 GI~~N~TliFS~~Qa~~aa~AGa~~ISPFV--gRi~D~~~~~~g~~~~~~~~d~Gv~~v~~i~~~y~~~g~~T~vl~A-S 230 (334)
T 3hjz_A 154 GIKCNLTLLFNFCQAVTCANANITLISPFV--GRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYFKEKGFKTEVMGA-S 230 (334)
T ss_dssp TCCEEEESCCSHHHHHHHHHTTCSEECCBH--HHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHHHHHTCCCEEEEB-C
T ss_pred CCcEEEEEeCCHHHHHHHHHcCCcEEEeec--cHHHHHhhhccCCcccccccCcHHHHHHHHHHHHHHcCCCCEEEEe-c
Confidence 566666666788888888899988876521 22111 0 012233344443 333345556554 5
Q ss_pred CCCHHHHHHHHHhCCCEEEEcHHHHHHhh
Q psy16780 128 VRYGTDVFKALALGAKMVFVGRPALWGLA 156 (202)
Q Consensus 128 I~~~~D~~kal~~GAd~V~ig~~~l~~~~ 156 (202)
+|+..++.. .+|||.+-+.-.++..+.
T Consensus 231 fRn~~~v~~--laG~d~~Tipp~ll~~L~ 257 (334)
T 3hjz_A 231 FRNLDEIKE--LAGCDLLTIAPKFLEELK 257 (334)
T ss_dssp CSSHHHHHH--TTTCSEEEECHHHHHHHH
T ss_pred CCCHHHHHH--HhCCCEEEcCHHHHHHHH
Confidence 999999987 569999999988887643
No 409
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=90.62 E-value=0.23 Score=43.80 Aligned_cols=87 Identities=7% Similarity=-0.136 Sum_probs=63.7
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEE
Q psy16780 53 WSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYL 124 (202)
Q Consensus 53 ~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia 124 (202)
.+.++++|+.+ ++++.+... .+.+++ +.+.+.|++.|.--- .+.+++.+.++++.+ .+||++
T Consensus 215 ~e~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~--------~~~d~~~~~~l~~~~--~iPIa~ 284 (426)
T 4e4f_A 215 PKLFEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMEDPT--------PAENQACFRLIRQHT--VTPIAV 284 (426)
T ss_dssp HHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECCS--------CCSSGGGGHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCC--------ChHHHHHHHHHHhcC--CCCEEe
Confidence 46899999987 688988754 455554 555677887775210 112455667776655 799999
Q ss_pred ecCCCCHHHHHHHHHhC-CCEEEEcH
Q psy16780 125 DGGVRYGTDVFKALALG-AKMVFVGR 149 (202)
Q Consensus 125 ~GGI~~~~D~~kal~~G-Ad~V~ig~ 149 (202)
++.+.+..++.+++..| +|.|++--
T Consensus 285 dE~~~~~~~~~~~i~~ga~d~v~~k~ 310 (426)
T 4e4f_A 285 GEVFNSIWDCKQLIEEQLIDYIRTTI 310 (426)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999987 78888743
No 410
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=90.61 E-value=2.8 Score=34.78 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=57.0
Q ss_pred cHHHHHHHHHhcCCCEEEEecc--CHHH----HHHHHHcCCcEEEeeccCcCCCCCc--cchHHHHHHHHHHhCCCcEEE
Q psy16780 52 NWSDVTWLKTITKLPIVLKGIL--TAED----AKIGVEMGASAIMVSNHGGRQLDYV--PASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~--~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~--~~~~~~l~~i~~~~~~~ipii 123 (202)
..+.++++. .++.||++|... ++++ +..+...|-+-+++.-.|++- ... ..+...+..+++.. ...||+
T Consensus 118 n~~ll~~~a-~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~~~~~~dl~~i~~lk~~~-~~~pV~ 194 (280)
T 2qkf_A 118 QTDLVVAMA-KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF-GYDNLVVDMLGFGVMKQTC-GNLPVI 194 (280)
T ss_dssp BHHHHHHHH-HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHHHT-TTCCEE
T ss_pred CHHHHHHHH-cCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHHhC-CCCCEE
Confidence 355777874 579999999762 5544 345567887666665544421 111 13555677776653 257999
Q ss_pred Ee-----------cCCCCH-----HH-HHHHHHhCCCEEEEcHHHH
Q psy16780 124 LD-----------GGVRYG-----TD-VFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 124 a~-----------GGI~~~-----~D-~~kal~~GAd~V~ig~~~l 152 (202)
.+ ||-..+ .. +..++++||++++|=+.+-
T Consensus 195 ~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 195 FDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPD 240 (280)
T ss_dssp EEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC---
T ss_pred EECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCC
Confidence 85 333333 23 3355678999999988765
No 411
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=90.56 E-value=0.9 Score=35.52 Aligned_cols=72 Identities=14% Similarity=0.035 Sum_probs=47.9
Q ss_pred HHHHHHHHHcCCcEEEeeccCcC-CCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHH-HHHHHHHhCCCEEEEcH
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGR-QLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGT-DVFKALALGAKMVFVGR 149 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~-~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~-D~~kal~~GAd~V~ig~ 149 (202)
.+.++.+.++|+|.+.+.-..|+ ... .....+.+.++++.+ +.|+.+.+.+.+.. .+..+..+|||.|.+..
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~-~~~g~~~i~~i~~~~--~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~ 92 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPN-ISFGADVVASMRKHS--KLVFDCHLMVVDPERYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSC-BCBCHHHHHHHHTTC--CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCc-cccCHHHHHHHHHhC--CCCEEEEEeecCHHHHHHHHHHcCCCEEEEcc
Confidence 46688889999999766432121 110 011145566666544 68999999999976 46666679999998853
No 412
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=90.49 E-value=7.2 Score=32.87 Aligned_cols=110 Identities=14% Similarity=0.073 Sum_probs=70.7
Q ss_pred cCHHHHHHHH-HcCCcEEEeecc---CcCCCCCc-cchHHHHHHHHHHhCCCcEEEEecCC-------------------
Q psy16780 73 LTAEDAKIGV-EMGASAIMVSNH---GGRQLDYV-PASIEALPEIAKAVGHKVDVYLDGGV------------------- 128 (202)
Q Consensus 73 ~~~~~a~~l~-~aG~d~I~v~~~---gg~~~~~~-~~~~~~l~~i~~~~~~~ipiia~GGI------------------- 128 (202)
.+|+++.... +.|+|.+-++-+ |-....+. .-+++.|.++.+.. ++|++.-||=
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~--~~PLVlHGgS~vp~~~~~~~~~~gg~~~~ 232 (307)
T 3n9r_A 155 VNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT--NIPLVLHGASAIPDNVRKSYLDAGGDLKG 232 (307)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH--CSCEEESSCCCCCHHHHHHHHHTTCCCTT
T ss_pred CCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC--CCCeEEeCCCCcchHHHHHHHHhcCccCC
Confidence 3688888765 699999988642 22211122 23677788886655 6999998864
Q ss_pred ---CCHHHHHHHHHhCCCEEEEcHHHHHHh----h---hcC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q psy16780 129 ---RYGTDVFKALALGAKMVFVGRPALWGL----A---HSG-----K-SGVRKVLDILINEFDQALALSGCT 184 (202)
Q Consensus 129 ---~~~~D~~kal~~GAd~V~ig~~~l~~~----~---~~G-----~-~~v~~~i~~l~~~L~~~m~~~G~~ 184 (202)
...+++.+++..|..=|-+++-+-.+. . .+. + .-+....+.+++-++..|..+|+.
T Consensus 233 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 304 (307)
T 3n9r_A 233 SKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSA 304 (307)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 236788899999999999999654321 1 111 1 123333455677777777777764
No 413
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=90.19 E-value=1.4 Score=38.06 Aligned_cols=91 Identities=11% Similarity=0.021 Sum_probs=60.6
Q ss_pred cccHHHHHHHHHhc-CCCEEEEec--cCH----HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEE
Q psy16780 50 TINWSDVTWLKTIT-KLPIVLKGI--LTA----EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDV 122 (202)
Q Consensus 50 ~~~~~~i~~i~~~~-~~Pv~vK~~--~~~----~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipi 122 (202)
+...+.++++|+.+ ++++.+... .+. +.++.+.+.|++.|.= + ..+.+++.+.++++.. .+||
T Consensus 177 ~~d~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEq---P-----~~~~d~~~~~~l~~~~--~iPI 246 (385)
T 3i6e_A 177 AFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIEQ---P-----VRAHHFELMARLRGLT--DVPL 246 (385)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEEC---C-----SCTTCHHHHHHHHTTC--SSCE
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC---C-----CCcccHHHHHHHHHhC--CCCE
Confidence 33456777777775 556666642 232 3445566667666541 0 0122466677776655 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 123 YLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 123 ia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
+++.-+.+..|+.+++..| +|.|++--.
T Consensus 247 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 247 LADESVYGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EEeCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 9999999999999999987 799988643
No 414
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=90.07 E-value=0.92 Score=38.35 Aligned_cols=87 Identities=22% Similarity=0.358 Sum_probs=57.1
Q ss_pred HHHHHHHHHh---cCCCEEEE--e--------c--cCHHH----HHHHHHcCCc----EEEeeccCcCCCCCccchHHHH
Q psy16780 53 WSDVTWLKTI---TKLPIVLK--G--------I--LTAED----AKIGVEMGAS----AIMVSNHGGRQLDYVPASIEAL 109 (202)
Q Consensus 53 ~~~i~~i~~~---~~~Pv~vK--~--------~--~~~~~----a~~l~~aG~d----~I~v~~~gg~~~~~~~~~~~~l 109 (202)
.+.+.++.+. +++|+++= . . .+++. ++.+.+.|+| .|.+-- + +.+
T Consensus 162 l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y-----------~-e~f 229 (307)
T 3fok_A 162 LEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPV-----------V-EEM 229 (307)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEEC-----------C-TTH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCC-----------c-HHH
Confidence 4445555443 58998773 1 1 34444 5677889999 887721 1 345
Q ss_pred HHHHHHhCCCcEEEEecCCC--CHHHHH----HHHH-hCCCEEEEcHHHHH
Q psy16780 110 PEIAKAVGHKVDVYLDGGVR--YGTDVF----KALA-LGAKMVFVGRPALW 153 (202)
Q Consensus 110 ~~i~~~~~~~ipiia~GGI~--~~~D~~----kal~-~GAd~V~ig~~~l~ 153 (202)
.++.+.. .+||+..||=. +.++++ +++. .||.++.+||-++.
T Consensus 230 ~~Vv~a~--~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 230 ERVMEST--TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp HHHGGGC--SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred HHHHHhC--CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 6665555 69999999876 345555 4556 59999999998763
No 415
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=89.79 E-value=3.4 Score=35.44 Aligned_cols=91 Identities=12% Similarity=0.088 Sum_probs=60.9
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++++|+.+ ++++.+-.. .++++ ++.+.+.|+..|.= + ..+.+++.+.++++.. ++|
T Consensus 177 ~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEe---P-----~~~~d~~~~~~l~~~~--~ip 246 (381)
T 3fcp_A 177 ATDLRHTRAIVEALGDRASIRVDVNQAWDAATGAKGCRELAAMGVDLIEQ---P-----VSAHDNAALVRLSQQI--ETA 246 (381)
T ss_dssp HHHHHHHHHHHHHTCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCSEEEC---C-----BCTTCHHHHHHHHHHS--SSE
T ss_pred HHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHhhcCccceeC---C-----CCcccHHHHHHHHHhC--CCC
Confidence 44556777777776 356665532 34444 34455666655530 0 0123567778887776 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
|+++..+.+..|+.+++..| +|.|++--.
T Consensus 247 Ia~dE~~~~~~~~~~~~~~~a~d~v~~k~~ 276 (381)
T 3fcp_A 247 ILADEAVATAYDGYQLAQQGFTGAYALKIA 276 (381)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred EEECCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999999999986 899988643
No 416
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=89.39 E-value=1.8 Score=37.39 Aligned_cols=94 Identities=14% Similarity=0.060 Sum_probs=64.3
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHH--cCCcEEEeeccCcCCCCCccchHHHHHHHHHHhC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVE--MGASAIMVSNHGGRQLDYVPASIEALPEIAKAVG 117 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~--aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~ 117 (202)
+++...+.++++|+.+ ++++.+-.- .+.+++ +.+.+ .|+..+.= + ..+.+++.+.++++..
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iEe---P-----~~~~d~~~~~~l~~~~- 238 (379)
T 3r0u_A 168 DFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNVEIIEQ---P-----VKYYDIKAMAEITKFS- 238 (379)
T ss_dssp CHHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEEC---C-----SCTTCHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEEC---C-----CCcccHHHHHHHHhcC-
Confidence 4445567888888887 467777643 455554 44555 45555531 0 0122466778887776
Q ss_pred CCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHH
Q psy16780 118 HKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPA 151 (202)
Q Consensus 118 ~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~ 151 (202)
.+||.++..+.+..|+.+++..| +|.|++--..
T Consensus 239 -~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 239 -NIPVVADESVFDAKDAERVIDEQACNMINIKLAK 272 (379)
T ss_dssp -SSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH
T ss_pred -CCCEEeCCccCCHHHHHHHHHcCCCCEEEECccc
Confidence 79999999999999999999987 7999886543
No 417
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=89.38 E-value=0.59 Score=40.48 Aligned_cols=91 Identities=5% Similarity=-0.019 Sum_probs=62.8
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHh---
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAV--- 116 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~--- 116 (202)
+.+...+.++++|+.+ ++++.+-.- .+.+++ +.+.+.|++.+.= ... .+++.+.++++.+
T Consensus 183 ~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~------P~~---~d~~~~~~l~~~l~~~ 253 (392)
T 3p3b_A 183 GTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVNLYWLEE------AFH---EDEALYEDLKEWLGQR 253 (392)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSCEEEEEC------SSS---CCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEec------CCc---ccHHHHHHHHHhhccC
Confidence 3455677899999876 688887543 456554 4444556665531 011 3566677777761
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALG-AKMVFVG 148 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig 148 (202)
+.++||++++ +.+..++.+++..| +|+|++-
T Consensus 254 g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 254 GQNVLIADGE-GLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp TCCCEEEECC-SSCCTTHHHHHHTTSCCEECCB
T ss_pred CCCccEEecC-CCCHHHHHHHHHcCCCCEEEeC
Confidence 0279999999 99999999999988 7988873
No 418
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=89.28 E-value=5.6 Score=33.32 Aligned_cols=90 Identities=19% Similarity=0.244 Sum_probs=58.8
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccC-c---CC-CCCccchHH----HHHHHHHHhCCCcEEEEe
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHG-G---RQ-LDYVPASIE----ALPEIAKAVGHKVDVYLD 125 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g-g---~~-~~~~~~~~~----~l~~i~~~~~~~ipiia~ 125 (202)
.++++++. +-|+.+=...+.-.|+.+.++|+|+|-+++.+ + .. .|.++.+++ .++.+.+.. ++||+++
T Consensus 13 ~lr~l~~~-~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD 89 (298)
T 3eoo_A 13 KFRAAVAA-EQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVD 89 (298)
T ss_dssp HHHHHHHH-SSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEE
T ss_pred HHHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEE
Confidence 45555443 56888777889999999999999999998721 1 11 233444443 234455554 7999997
Q ss_pred c--CCCCHHHHHH----HHHhCCCEEEE
Q psy16780 126 G--GVRYGTDVFK----ALALGAKMVFV 147 (202)
Q Consensus 126 G--GI~~~~D~~k----al~~GAd~V~i 147 (202)
. |-.++.++.+ ...+||.+|-+
T Consensus 90 ~d~Gyg~~~~v~~~v~~l~~aGaagv~i 117 (298)
T 3eoo_A 90 IDTGWGGAFNIARTIRSFIKAGVGAVHL 117 (298)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 6 4446655543 34579998865
No 419
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=88.98 E-value=4.9 Score=34.95 Aligned_cols=123 Identities=11% Similarity=0.117 Sum_probs=66.9
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHH----HHHHHcCC-cEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEe
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDA----KIGVEMGA-SAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLD 125 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a----~~l~~aG~-d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~ 125 (202)
.+..|+++.+ ++.||++|-- .|.++. +.+.+.|. +.+.+.+.....-.....++..+..+++.++ .+||..+
T Consensus 147 N~pLL~~va~-~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~-~lpVG~S 224 (385)
T 1vli_A 147 HLPLLKYVAR-LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFP-EAVIGFS 224 (385)
T ss_dssp CHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHST-TSEEEEE
T ss_pred CHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcC-CCCEEeC
Confidence 3567777765 5899999965 466553 44556787 4444433211110111224556777766542 5899777
Q ss_pred cCCCC-HHHHHHHHHhCCCEEEEcHHHHHHhhhcChHH---H-HHHHHHHHHHHHHHH
Q psy16780 126 GGVRY-GTDVFKALALGAKMVFVGRPALWGLAHSGKSG---V-RKVLDILINEFDQAL 178 (202)
Q Consensus 126 GGI~~-~~D~~kal~~GAd~V~ig~~~l~~~~~~G~~~---v-~~~i~~l~~~L~~~m 178 (202)
+--.. ..-...|+++||+.+- +.|--.-...|++. + -+-+..|.++++..-
T Consensus 225 dHt~G~~~~~~AAvAlGA~iIE--kHftldra~~G~D~~~SL~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 225 DHSEHPTEAPCAAVRLGAKLIE--KHFTIDKNLPGADHSFALNPDELKEMVDGIRKTE 280 (385)
T ss_dssp ECCSSSSHHHHHHHHTTCSEEE--EEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHcCCCEEE--eCCCccccCCCCchhhhCCHHHHHHHHHHHHHHH
Confidence 64333 5556678889999443 22211101122211 0 133566777777777
No 420
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=88.93 E-value=4.5 Score=32.50 Aligned_cols=78 Identities=21% Similarity=0.119 Sum_probs=51.5
Q ss_pred CCEEEEec--cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHH-hC
Q psy16780 65 LPIVLKGI--LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALA-LG 141 (202)
Q Consensus 65 ~Pv~vK~~--~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~-~G 141 (202)
-+..||++ .++++++ +.++|+|++=+.-.... ....+.+...++.+.. ..|+...|=..+.+++.+.+. .+
T Consensus 19 ~~M~VKICGit~~ed~~-a~~~gaD~iGfIf~~~S---pR~V~~~~A~~i~~~~--~~~~~~v~v~v~~~ei~~~i~~~~ 92 (228)
T 4aaj_A 19 SHMFVKICGIKSLEELE-IVEKHADATGVVVNSNS---KRRIPLEKAREIIENS--AIPVFLVSTMVGFSEWAMAIERTG 92 (228)
T ss_dssp -CCEEEECCCCSHHHHH-HHHTTCSEEEEECSSSS---TTBCCHHHHHHHHHHC--SSCEEEEECCCCHHHHHHHHHHHT
T ss_pred CceEEEECCCCcHHHHH-HHHcCCCEEEEEecCCC---CCCCCHHHHHHHHHhh--CCCCEEEeccCchHHHHHHHHhcc
Confidence 35689987 5788886 67899999854332211 0122445556666555 566777776667888887775 68
Q ss_pred CCEEEEc
Q psy16780 142 AKMVFVG 148 (202)
Q Consensus 142 Ad~V~ig 148 (202)
.|.|++=
T Consensus 93 ld~vQLH 99 (228)
T 4aaj_A 93 AQYIQVH 99 (228)
T ss_dssp CSEEEEC
T ss_pred chheecc
Confidence 9999984
No 421
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=88.85 E-value=1.4 Score=38.09 Aligned_cols=92 Identities=10% Similarity=-0.031 Sum_probs=66.2
Q ss_pred CccccHHHHHHHHHhc--CCCEE-EEec--cCHHHH----HHHHHcCC--cEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 48 DETINWSDVTWLKTIT--KLPIV-LKGI--LTAEDA----KIGVEMGA--SAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~-vK~~--~~~~~a----~~l~~aG~--d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
+++...+.++++|+.+ ++++. +..- .+++++ +.+.+.|+ +.|.= + . .+.+++.+.++++.+
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iEq---P---~--~~~d~~~~~~l~~~~ 239 (391)
T 3gd6_A 168 NLDADEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIES---P---A--PRNDFDGLYQLRLKT 239 (391)
T ss_dssp CHHHHHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEEC---C---S--CTTCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceecC---C---C--ChhhHHHHHHHHHHc
Confidence 5566677899999886 67888 7643 455554 55666777 66641 0 0 122567778887776
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHhC-CCEEEEcHHH
Q psy16780 117 GHKVDVYLDGGVRYGTDVFKALALG-AKMVFVGRPA 151 (202)
Q Consensus 117 ~~~ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~~ 151 (202)
.+|| +..+.+..|+.+++..| +|.|++--..
T Consensus 240 --~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 271 (391)
T 3gd6_A 240 --DYPI--SEHVWSFKQQQEMIKKDAIDIFNISPVF 271 (391)
T ss_dssp --SSCE--EEECCCHHHHHHHHHHTCCSEEEECHHH
T ss_pred --CCCc--CCCCCCHHHHHHHHHcCCCCEEEECchh
Confidence 7999 78899999999999987 8999987644
No 422
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=88.78 E-value=6 Score=33.23 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=58.2
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCc----CC-CCCccchHHH-HHHHHHHhC--CCcEEEEec
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGG----RQ-LDYVPASIEA-LPEIAKAVG--HKVDVYLDG 126 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg----~~-~~~~~~~~~~-l~~i~~~~~--~~ipiia~G 126 (202)
.++++.+.-+.|+.+=.+.+.-.|+.+.++|+|++-+++.+- .. .|.+..+++- +..++...+ .++||+++.
T Consensus 8 ~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~ 87 (302)
T 3fa4_A 8 SLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADA 87 (302)
T ss_dssp HHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEEC
T ss_pred HHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEEC
Confidence 455555444457776677899999999999999999976311 11 2334445443 333322222 379999976
Q ss_pred --CCCCHHHHH----HHHHhCCCEEEE
Q psy16780 127 --GVRYGTDVF----KALALGAKMVFV 147 (202)
Q Consensus 127 --GI~~~~D~~----kal~~GAd~V~i 147 (202)
|-.++.++. +...+||.+|.+
T Consensus 88 d~Gyg~~~~v~~tv~~l~~aGaagv~i 114 (302)
T 3fa4_A 88 DTGYGGPIMVARTTEQYSRSGVAAFHI 114 (302)
T ss_dssp TTTTSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 444555544 344589999976
No 423
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=88.77 E-value=0.57 Score=41.79 Aligned_cols=65 Identities=22% Similarity=0.191 Sum_probs=46.9
Q ss_pred HHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 75 AEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 75 ~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
.+.+..+.++|+|.+++.+.+|.. ...++.+..+++.. .+|++ .|+|.+.+++..++ |||+|.+|
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~----~~~L~~I~~l~~~~--~vpvi-~k~v~~~~~a~~l~--G~d~v~vg 294 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHN----LKAIKSMKEMRQKV--DADFI-VGNIANPKAVDDLT--FADAVKVG 294 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCC----HHHHHHHHHHHHTC--CSEEE-EEEECCHHHHTTCT--TSSEEEEC
T ss_pred HHHHHHHHHhcCCceEEEecCCcE----eehhhHHHHHHHHh--CCccc-cCCcCCHHHHHHhh--CCCeEEEe
Confidence 466788899999999887644321 12334456666655 79997 57888999887666 99999984
No 424
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=88.76 E-value=1.5 Score=37.74 Aligned_cols=91 Identities=12% Similarity=0.071 Sum_probs=59.2
Q ss_pred cccHHHHHHHHHhc--CCCEEEEec--cCHHH----HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcE
Q psy16780 50 TINWSDVTWLKTIT--KLPIVLKGI--LTAED----AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVD 121 (202)
Q Consensus 50 ~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ip 121 (202)
+...+.++++|+.+ ++++.+... .+.++ ++.+.+.|+..|. +. ..+.+++.+.++++.. .+|
T Consensus 178 ~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ip 247 (382)
T 3dgb_A 178 DRDLAHVIAIKKALGDSASVRVDVNQAWDEAVALRACRILGGNGIDLIE-------QP-ISRNNRAGMVRLNASS--PAP 247 (382)
T ss_dssp HHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHHHTTTCCCEE-------CC-BCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHhhcCcCeee-------CC-CCccCHHHHHHHHHhC--CCC
Confidence 33455666776665 356666532 34433 3344555555443 00 0122566778887776 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 122 VYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 122 iia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
|+++..+.+..|+.+++..| +|.|++--.
T Consensus 248 Ia~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 277 (382)
T 3dgb_A 248 IMADESIECVEDAFNLAREGAASVFALKIA 277 (382)
T ss_dssp EEESTTCSSHHHHHHHHHHTCCSEEEECHH
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999999999986 899988643
No 425
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=88.40 E-value=0.57 Score=37.53 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=35.6
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++++.+++||++.+. .+.++++.+.++|+|+++++.
T Consensus 179 ~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGs 221 (248)
T 1geq_A 179 AYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGS 221 (248)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcH
Confidence 456889999888999998865 556999999999999999964
No 426
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=88.36 E-value=8.4 Score=32.42 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=59.2
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccC-c---CC-CCCccchHHH-HHHHHHHhC--C-CcEEE
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHG-G---RQ-LDYVPASIEA-LPEIAKAVG--H-KVDVY 123 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g-g---~~-~~~~~~~~~~-l~~i~~~~~--~-~ipii 123 (202)
-+.++++.+.-+.|+.+=...+.-.|+.+.++|+|+|-++|.+ + .. .|.++.+++. +..++...+ . ++||+
T Consensus 13 a~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~Pvi 92 (307)
T 3lye_A 13 AKKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLI 92 (307)
T ss_dssp HHHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEE
T ss_pred HHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEE
Confidence 3455665554446777767789999999999999999997631 1 11 2334445443 333322222 2 59999
Q ss_pred Eec--CCCCHHHHH----HHHHhCCCEEEE
Q psy16780 124 LDG--GVRYGTDVF----KALALGAKMVFV 147 (202)
Q Consensus 124 a~G--GI~~~~D~~----kal~~GAd~V~i 147 (202)
++. |-.++.++. +...+||.+|-+
T Consensus 93 aD~d~Gyg~~~~v~~~v~~l~~aGaagv~i 122 (307)
T 3lye_A 93 ADMDTGYGGPIMVARTVEHYIRSGVAGAHL 122 (307)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 976 444555544 344589999866
No 427
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=88.31 E-value=2.8 Score=34.66 Aligned_cols=95 Identities=21% Similarity=0.160 Sum_probs=56.8
Q ss_pred cHHHHHHHHHhcCCCEEEEecc--CHHH----HHHHHHcCCcEEEeeccCcCCCCCc--cchHHHHHHHHHHhCCCcEEE
Q psy16780 52 NWSDVTWLKTITKLPIVLKGIL--TAED----AKIGVEMGASAIMVSNHGGRQLDYV--PASIEALPEIAKAVGHKVDVY 123 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~--~~~~----a~~l~~aG~d~I~v~~~gg~~~~~~--~~~~~~l~~i~~~~~~~ipii 123 (202)
..+.++++. .++.||++|... ++++ +..+...|-+-+++.-+|++. ... ..+...+..+++ . . ||+
T Consensus 107 n~~ll~~~a-~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~~-~y~~~~~dl~~i~~lk~-~--~-pVi 180 (267)
T 2nwr_A 107 QTDLLLAAA-KTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTF-GYNNLVVDFRSLPIMKQ-W--A-KVI 180 (267)
T ss_dssp CHHHHHHHH-TTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEEC-SSSCEECCTTHHHHHTT-T--S-EEE
T ss_pred CHHHHHHHH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHH-c--C-CEE
Confidence 345777774 679999999763 4433 455667887666665555421 111 134456666544 2 4 998
Q ss_pred Ee---------------cCCCCH-HH-HHHHHHhCCCEEEEcHHHH
Q psy16780 124 LD---------------GGVRYG-TD-VFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 124 a~---------------GGI~~~-~D-~~kal~~GAd~V~ig~~~l 152 (202)
.+ +|-+.. .+ +..++++||++++|=+.+-
T Consensus 181 vD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~~ 226 (267)
T 2nwr_A 181 YDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPE 226 (267)
T ss_dssp EETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEESC
T ss_pred EcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecCC
Confidence 85 342221 23 3456678999999977543
No 428
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=88.30 E-value=8.9 Score=31.78 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=59.7
Q ss_pred cHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcC---CC-CCccchHHH-H---HHHHHHhCCCcEEE
Q psy16780 52 NWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGR---QL-DYVPASIEA-L---PEIAKAVGHKVDVY 123 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~---~~-~~~~~~~~~-l---~~i~~~~~~~ipii 123 (202)
+...+++.++. +-|+.+=...+.-.|+.+.++|+|.|-++...+. .. +..+.+++- + +.+++.. +..+|+
T Consensus 5 t~~~lr~~k~~-g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vv 82 (275)
T 1o66_A 5 TVNTLQKMKAA-GEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIV 82 (275)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEE
T ss_pred CHHHHHHHHhC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEE
Confidence 34455555543 5688776678999999999999999965322111 11 333445553 2 3344443 346788
Q ss_pred EecCC----CCHHHHH----HHHHhCCCEEEE
Q psy16780 124 LDGGV----RYGTDVF----KALALGAKMVFV 147 (202)
Q Consensus 124 a~GGI----~~~~D~~----kal~~GAd~V~i 147 (202)
++=+. .++++++ +.+..||++|-+
T Consensus 83 aD~pfgsy~~s~~~a~~na~rl~kaGa~aVkl 114 (275)
T 1o66_A 83 SDLPFGAYQQSKEQAFAAAAELMAAGAHMVKL 114 (275)
T ss_dssp EECCTTSSSSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EECCCCCccCCHHHHHHHHHHHHHcCCcEEEE
Confidence 88554 3577776 466789999987
No 429
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=88.25 E-value=0.4 Score=37.31 Aligned_cols=44 Identities=20% Similarity=0.327 Sum_probs=37.9
Q ss_pred cccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeec
Q psy16780 50 TINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
...++.++++++..++|+++-+..+++.+..+.++|+|+|.++.
T Consensus 148 ~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEESH
T ss_pred CcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEhH
Confidence 45688999999888999998776778999999999999999865
No 430
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=88.21 E-value=9.5 Score=31.66 Aligned_cols=40 Identities=15% Similarity=0.255 Sum_probs=28.6
Q ss_pred HHHHHHHHhc--CCCEEEEec-cC----HHHHHHHHHcCCcEEEeec
Q psy16780 54 SDVTWLKTIT--KLPIVLKGI-LT----AEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 54 ~~i~~i~~~~--~~Pv~vK~~-~~----~~~a~~l~~aG~d~I~v~~ 93 (202)
++++.+++.+ ++||++... .+ .+.++.+.++|+|++.+..
T Consensus 69 ~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 69 ALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3556555554 689999865 22 4567888999999998853
No 431
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=88.18 E-value=1.8 Score=36.40 Aligned_cols=69 Identities=20% Similarity=0.152 Sum_probs=43.5
Q ss_pred HHHHHHHcCCcEEEeeccCcCCCCCccc---hHH----HHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 77 DAKIGVEMGASAIMVSNHGGRQLDYVPA---SIE----ALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 77 ~a~~l~~aG~d~I~v~~~gg~~~~~~~~---~~~----~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
.++...+.|||.|+|.+-+.+......+ .++ .+..+++.+ ++||..+. .+++-+.+++.+||+.+-=-+
T Consensus 68 ~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~--~vpiSIDT--~~~~V~~aAl~aGa~iINdvs 143 (297)
T 1tx2_A 68 HAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV--KLPISIDT--YKAEVAKQAIEAGAHIINDIW 143 (297)
T ss_dssp HHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS--CSCEEEEC--SCHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC--CceEEEeC--CCHHHHHHHHHcCCCEEEECC
Confidence 3577889999999998643211111111 111 123333333 78998877 688889999999999886554
No 432
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=88.00 E-value=2.1 Score=36.08 Aligned_cols=67 Identities=15% Similarity=0.173 Sum_probs=44.5
Q ss_pred HHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEe---cCCCCHHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 78 AKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLD---GGVRYGTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 78 a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~---GGI~~~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
++...++|+|.|-+-+ ..+.+.+.++++.++ ..|+.++ +|-...-.+.+.-++|.+.|..+..++++
T Consensus 176 a~ay~eAGAD~ifi~g---------~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 176 LRAARDAGADVGFLEG---------ITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp HHHHHTTTCSEEEETT---------CCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHH
T ss_pred HHHHHHcCCCEEeecC---------CCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 4567899999998743 235567778877773 3677653 33221223455557899999999877753
No 433
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=87.84 E-value=7.9 Score=32.54 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=58.1
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccC-c--CC-CCCccchHH----HHHHHHHHhCCCcEEEEec
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHG-G--RQ-LDYVPASIE----ALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g-g--~~-~~~~~~~~~----~l~~i~~~~~~~ipiia~G 126 (202)
.++++++. +-|+.+=...+.-.|+.+.++|+|+|-+++.+ + .. .|.++.+++ .++.+++.. ++||+++.
T Consensus 20 ~lr~l~~~-~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~ 96 (305)
T 3ih1_A 20 RFRALVEA-NEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT--DLPVLVDI 96 (305)
T ss_dssp HHHHHHHS-SSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH--CCCEEEEC
T ss_pred HHHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc--CCCEEEEC
Confidence 44444433 56887767788999999999999999998721 1 01 233344443 234455555 68999976
Q ss_pred --CCCCHHHHHH----HHHhCCCEEEE
Q psy16780 127 --GVRYGTDVFK----ALALGAKMVFV 147 (202)
Q Consensus 127 --GI~~~~D~~k----al~~GAd~V~i 147 (202)
|-.++.++.+ ...+||++|-+
T Consensus 97 d~Gyg~~~~v~~~v~~l~~aGaagv~i 123 (305)
T 3ih1_A 97 DTGFGGVLNVARTAVEMVEAKVAAVQI 123 (305)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEE
Confidence 4445555543 34579999865
No 434
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=87.74 E-value=0.56 Score=36.99 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=37.5
Q ss_pred cccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeec
Q psy16780 50 TINWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.+.++.++++++..++||++=+..+++.+..+.++|+++|.++.
T Consensus 150 ~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 150 GRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTTCSEEEESH
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCEEEEhH
Confidence 45688899998888999988766699999999999999999965
No 435
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=87.59 E-value=8.2 Score=31.79 Aligned_cols=94 Identities=16% Similarity=0.137 Sum_probs=61.0
Q ss_pred cHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcC---CC-CCccchHHH-H---HHHHHHhCCCcEEE
Q psy16780 52 NWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGR---QL-DYVPASIEA-L---PEIAKAVGHKVDVY 123 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~---~~-~~~~~~~~~-l---~~i~~~~~~~ipii 123 (202)
+...+++.++. +-|+.+=...+.-.|+.+.++|+|.|-++...+. .. +..+.+++- + +.+++.. +..+|+
T Consensus 5 t~~~lr~~k~~-g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vv 82 (264)
T 1m3u_A 5 TISLLQKYKQE-KKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLL 82 (264)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEE
T ss_pred CHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEE
Confidence 34455555543 5688776678999999999999999988432111 11 333445543 2 3344443 346788
Q ss_pred EecCCC---CHHHHH----HHHHhCCCEEEE
Q psy16780 124 LDGGVR---YGTDVF----KALALGAKMVFV 147 (202)
Q Consensus 124 a~GGI~---~~~D~~----kal~~GAd~V~i 147 (202)
++=+.. ++++++ +.+..||++|-+
T Consensus 83 aD~pfgsy~~~~~a~~~a~rl~kaGa~aVkl 113 (264)
T 1m3u_A 83 ADLPFMAYATPEQAFENAATVMRAGANMVKI 113 (264)
T ss_dssp EECCTTSSSSHHHHHHHHHHHHHTTCSEEEC
T ss_pred EECCCCCcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 876665 777777 466789999987
No 436
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=87.48 E-value=9.2 Score=31.91 Aligned_cols=90 Identities=19% Similarity=0.276 Sum_probs=59.0
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccC-c---CC-CCCccchHHH----HHHHHHHhCCCcEEEEe
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHG-G---RQ-LDYVPASIEA----LPEIAKAVGHKVDVYLD 125 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g-g---~~-~~~~~~~~~~----l~~i~~~~~~~ipiia~ 125 (202)
.++++.+. +-|+.+=...+.-.|+.+.++|+|+|-+++.+ + .. .|.++.+++. ++.+.+.. +.||+++
T Consensus 8 ~lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD 84 (295)
T 1xg4_A 8 AFRAALTK-ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC--SLPLLVD 84 (295)
T ss_dssp HHHHHHHH-SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC--CSCEEEE
T ss_pred HHHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC--CCCEEec
Confidence 34444433 56888777789999999999999999998751 1 11 1334444443 34455555 6899997
Q ss_pred c--CCC-CHHHHHH----HHHhCCCEEEE
Q psy16780 126 G--GVR-YGTDVFK----ALALGAKMVFV 147 (202)
Q Consensus 126 G--GI~-~~~D~~k----al~~GAd~V~i 147 (202)
. |-. ++.++.+ .+.+||++|-+
T Consensus 85 ~d~Gyg~~~~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 85 ADIGFGSSAFNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp CTTCSSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 6 444 5555543 44589999876
No 437
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=87.08 E-value=3.5 Score=37.10 Aligned_cols=41 Identities=27% Similarity=0.449 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 105 SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 105 ~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+++.+..+++.. ++||+.= |+.+.+|+.++..+|||+|.++
T Consensus 331 ~~~~i~~lr~~~--~~PvivK-gv~~~e~A~~a~~aGad~I~vs 371 (511)
T 1kbi_A 331 TWKDIEELKKKT--KLPIVIK-GVQRTEDVIKAAEIGVSGVVLS 371 (511)
T ss_dssp CHHHHHHHHHHC--SSCEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHh--CCcEEEE-eCCCHHHHHHHHHcCCCEEEEc
Confidence 466778887776 7999986 4678999999999999999994
No 438
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=87.03 E-value=3.3 Score=35.08 Aligned_cols=70 Identities=19% Similarity=0.168 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCC----ccchHH-------HHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCE
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDY----VPASIE-------ALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKM 144 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~----~~~~~~-------~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~ 144 (202)
+.++...+.|||.|+|++-..+.... ..+.-+ .+..+++.. ++||-.+. .+++-+.+++.+||+.
T Consensus 53 ~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~--~vpISIDT--~~~~Va~aAl~aGa~i 128 (314)
T 3tr9_A 53 RTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF--PQLISVDT--SRPRVMREAVNTGADM 128 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC--CSEEEEEC--SCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC--CCeEEEeC--CCHHHHHHHHHcCCCE
Confidence 44677899999999998643222111 111111 223333333 68888876 7889999999999988
Q ss_pred EEEcH
Q psy16780 145 VFVGR 149 (202)
Q Consensus 145 V~ig~ 149 (202)
|-=-+
T Consensus 129 INDVs 133 (314)
T 3tr9_A 129 INDQR 133 (314)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 75544
No 439
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=87.03 E-value=3.9 Score=35.11 Aligned_cols=100 Identities=21% Similarity=0.200 Sum_probs=62.3
Q ss_pred cHHHHHHHHHh--cCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCC-----------C---ccchHHHHHHHH--
Q psy16780 52 NWSDVTWLKTI--TKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLD-----------Y---VPASIEALPEIA-- 113 (202)
Q Consensus 52 ~~~~i~~i~~~--~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~-----------~---~~~~~~~l~~i~-- 113 (202)
+|+=++.++.. -++++-+=.+++...+..+.++|+..|...- ||-.+ . ..+....+.++.
T Consensus 163 T~eGi~A~~~L~~eGI~vN~TliFS~~Qa~~aAeAGa~~ISPFV--GRidD~~~~~~~~~~~~~~~~~~Gv~~v~~i~~~ 240 (345)
T 3tkf_A 163 TWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFV--GRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKL 240 (345)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECCHHHHHHHHHTTCSEEEEBS--HHHHHHHHHHTTCSSCCCGGGCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEeec--chHHHHhhhccccccccccccCCHHHHHHHHHHH
Confidence 35544444432 2677777777888999999999998887631 22111 0 012233344443
Q ss_pred -HHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhh
Q psy16780 114 -KAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLA 156 (202)
Q Consensus 114 -~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~ 156 (202)
+..+.+.-|++ -.+|+..++.. .+|||.+-+.-.++..+.
T Consensus 241 yk~~g~~T~Vl~-ASfRn~~~V~a--LaG~d~vTipp~lL~~L~ 281 (345)
T 3tkf_A 241 YKSHGFKTIVMG-ASFRNVEQVIA--LAGCDALTISPVLLEELK 281 (345)
T ss_dssp HHHHTCCSEEEE-BCCSSHHHHHT--TTTSSEEEECHHHHHHHH
T ss_pred HHHcCCCCEEEe-CCCCCHHHHHH--HhCCCEEECCHHHHHHHH
Confidence 33333455555 55999999984 469999999988887654
No 440
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=86.90 E-value=2.1 Score=35.12 Aligned_cols=76 Identities=17% Similarity=0.174 Sum_probs=45.8
Q ss_pred cCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHHhCCC----E--EEEcHHHHHHhh
Q psy16780 84 MGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY-GTDVFKALALGAK----M--VFVGRPALWGLA 156 (202)
Q Consensus 84 aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~-~~D~~kal~~GAd----~--V~ig~~~l~~~~ 156 (202)
+|.++++++.+. .+.+..+++.+++ .+++ +=||+- +.+..+++..|+| . +.+||+++.+
T Consensus 169 ~g~~GvV~~at~----------~~e~~~ir~~~~~-~~~l-~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A-- 234 (255)
T 3qw3_A 169 NGNVGLVVGATD----------PVALARVRARAPT-LWFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA-- 234 (255)
T ss_dssp GSCEEEEECSSC----------HHHHHHHHHHCSS-CCEE-ECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTS--
T ss_pred hCCeEEEECCCC----------HHHHHHHHHHCCC-CeEE-ECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCC--
Confidence 789999886431 2345566666643 4554 455653 3456677778998 3 9999999964
Q ss_pred hcChHHHHHHHHHHHHHHHHH
Q psy16780 157 HSGKSGVRKVLDILINEFDQA 177 (202)
Q Consensus 157 ~~G~~~v~~~i~~l~~~L~~~ 177 (202)
..+ .+..+.++++++..
T Consensus 235 -~dp---~~aa~~i~~~i~~~ 251 (255)
T 3qw3_A 235 -ADP---RAAAKELCEEINAI 251 (255)
T ss_dssp -SCH---HHHHHHHHHHHHHH
T ss_pred -CCH---HHHHHHHHHHHHHH
Confidence 222 34556666666654
No 441
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=86.70 E-value=6 Score=32.76 Aligned_cols=68 Identities=21% Similarity=0.244 Sum_probs=40.7
Q ss_pred HHHHHHHcCCcEEEeeccCcCCCCCccc---hHHHHHHHHHHh-CCCcEEEEecCCCCHHHHHHHHHhCCCEEE
Q psy16780 77 DAKIGVEMGASAIMVSNHGGRQLDYVPA---SIEALPEIAKAV-GHKVDVYLDGGVRYGTDVFKALALGAKMVF 146 (202)
Q Consensus 77 ~a~~l~~aG~d~I~v~~~gg~~~~~~~~---~~~~l~~i~~~~-~~~ipiia~GGI~~~~D~~kal~~GAd~V~ 146 (202)
.++.+.+.|||.|+|++-.-+......+ .++-+..+.+.+ ..++||-.+. +.++-+.+++.+||+.+-
T Consensus 35 ~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT--~~~~Va~~al~aGa~iIN 106 (270)
T 4hb7_A 35 RVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDT--FRSEVAEACLKLGVDMIN 106 (270)
T ss_dssp HHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEEC--SCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEEC--CCHHHHHHHHHhccceec
Confidence 3677899999999997632221111111 122111122233 2357776665 788888899999998875
No 442
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=86.67 E-value=3.1 Score=34.62 Aligned_cols=70 Identities=19% Similarity=0.199 Sum_probs=44.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccc---hHH----HHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPA---SIE----ALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~---~~~----~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+.++...+.|||.|+|++-+.+......+ .++ .+..+++.+ ++||..+. .+++-+..++.+||+.|-=-
T Consensus 42 ~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~--~~piSIDT--~~~~va~aAl~aGa~iINdv 117 (282)
T 1aj0_A 42 KHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF--EVWISVDT--SKPEVIRESAKVGAHIINDI 117 (282)
T ss_dssp HHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC--CCEEEEEC--CCHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc--CCeEEEeC--CCHHHHHHHHHcCCCEEEEC
Confidence 33677889999999998743221111111 122 222333333 68887766 78888889999999988765
Q ss_pred H
Q psy16780 149 R 149 (202)
Q Consensus 149 ~ 149 (202)
+
T Consensus 118 s 118 (282)
T 1aj0_A 118 R 118 (282)
T ss_dssp T
T ss_pred C
Confidence 5
No 443
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=86.67 E-value=0.95 Score=37.54 Aligned_cols=42 Identities=17% Similarity=0.260 Sum_probs=35.8
Q ss_pred cHHHHHHHHH-hcC-CCEEEEe-ccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKT-ITK-LPIVLKG-ILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~-~~~-~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++.+++ ..+ +||++-. +.+++++..+.+.|+|+|.+..
T Consensus 164 ~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 164 TRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp THHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred CHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 3567899998 678 9999875 4799999999999999999965
No 444
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=86.66 E-value=3.7 Score=34.00 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=59.3
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC-CH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR-YG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~-~~ 131 (202)
++.++++++..++|++. .+.+++.+..+.+. +|.+.+..+. ..+...+.++.+ . ..||+.+-|.. +.
T Consensus 91 l~~l~~~~~~~Gl~~~t-e~~d~~~~~~l~~~-vd~~kIgs~~-------~~n~~ll~~~a~-~--~kPV~lk~G~~~t~ 158 (276)
T 1vs1_A 91 LKLLRRAGDEAGLPVVT-EVLDPRHVETVSRY-ADMLQIGARN-------MQNFPLLREVGR-S--GKPVLLKRGFGNTV 158 (276)
T ss_dssp HHHHHHHHHHHTCCEEE-ECCCGGGHHHHHHH-CSEEEECGGG-------TTCHHHHHHHHH-H--TCCEEEECCTTCCH
T ss_pred HHHHHHHHHHcCCcEEE-ecCCHHHHHHHHHh-CCeEEECccc-------ccCHHHHHHHHc-c--CCeEEEcCCCCCCH
Confidence 45677777788999986 67888888888888 9999996532 224456666653 3 78999999997 98
Q ss_pred HHHHHHHH----hCCC
Q psy16780 132 TDVFKALA----LGAK 143 (202)
Q Consensus 132 ~D~~kal~----~GAd 143 (202)
+++..++. .|..
T Consensus 159 ~ei~~Ave~i~~~Gn~ 174 (276)
T 1vs1_A 159 EELLAAAEYILLEGNW 174 (276)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCC
Confidence 98887765 4763
No 445
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=86.66 E-value=2.3 Score=36.93 Aligned_cols=91 Identities=11% Similarity=0.037 Sum_probs=64.9
Q ss_pred CccccHHHHHHHHHhc-CCCEEEEec--cCHHHH----HHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCc
Q psy16780 48 DETINWSDVTWLKTIT-KLPIVLKGI--LTAEDA----KIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKV 120 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~-~~Pv~vK~~--~~~~~a----~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i 120 (202)
+++...+.++++|+.+ ++++.+-.- .+.+++ +.+.+.|+..|.= ..++++.+.++++.. .+
T Consensus 195 ~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~iEq----------P~~d~~~~~~l~~~~--~i 262 (398)
T 4dye_A 195 DCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAGIALEELDLEYLED----------PCVGIEGMAQVKAKV--RI 262 (398)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC----------CSSHHHHHHHHHHHC--CS
T ss_pred CHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcCCCEEcC----------CCCCHHHHHHHHhhC--CC
Confidence 4555667888888886 566776532 455554 4455667666641 112566777887776 79
Q ss_pred EEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 121 DVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
||.++.-+.+..|+.+++..| +|.|++--.
T Consensus 263 PIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~ 293 (398)
T 4dye_A 263 PLCTNMCVVRFEDFAPAMRLNAVDVIHGDVY 293 (398)
T ss_dssp CEEESSSCCSGGGHHHHHHTTCCSEEEECHH
T ss_pred CEEeCCcCCCHHHHHHHHHhCCCCEEEeCcc
Confidence 999999999999999999987 899988654
No 446
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=86.52 E-value=8.2 Score=31.82 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=28.1
Q ss_pred HHHHHHHhc--CCCEEEEec-cC----HHHHHHHHHcCCcEEEeec
Q psy16780 55 DVTWLKTIT--KLPIVLKGI-LT----AEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 55 ~i~~i~~~~--~~Pv~vK~~-~~----~~~a~~l~~aG~d~I~v~~ 93 (202)
+++.+.+.+ ++||++... .+ .+.++.+.++|+|++.+..
T Consensus 59 v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 59 VIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 555555554 689999765 22 4557889999999998863
No 447
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=86.45 E-value=6.6 Score=32.71 Aligned_cols=92 Identities=11% Similarity=0.125 Sum_probs=58.6
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccC-c---CC-CCCccchHHH-HHHHHHHh-CCCcEEEEec-
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHG-G---RQ-LDYVPASIEA-LPEIAKAV-GHKVDVYLDG- 126 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g-g---~~-~~~~~~~~~~-l~~i~~~~-~~~ipiia~G- 126 (202)
.++++++. +-|+.+=...+.-.|+.+.++|+|+|-+++.+ + .. .|.++.+++. +..++... ..++||+++.
T Consensus 12 ~lr~l~~~-~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d 90 (287)
T 3b8i_A 12 MFRALLDS-SRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADAD 90 (287)
T ss_dssp HHHHHHHS-SCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECT
T ss_pred HHHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34444432 56887767789999999999999999998752 1 11 2334445543 33332222 1278999976
Q ss_pred -CCCCHHHHHH----HHHhCCCEEEE
Q psy16780 127 -GVRYGTDVFK----ALALGAKMVFV 147 (202)
Q Consensus 127 -GI~~~~D~~k----al~~GAd~V~i 147 (202)
|-.+++++.+ .+.+||++|-+
T Consensus 91 ~Gyg~~~~~~~~v~~l~~aGa~gv~i 116 (287)
T 3b8i_A 91 HGYGNALNVMRTVVELERAGIAALTI 116 (287)
T ss_dssp TCSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 4447666543 44589999987
No 448
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=86.44 E-value=1.1 Score=36.60 Aligned_cols=41 Identities=17% Similarity=0.118 Sum_probs=34.8
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++|+.+++||.+..- .+++.++. +.+|+|+++|++
T Consensus 194 ~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 194 IKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECH
T ss_pred HHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECH
Confidence 357899999989999999865 56999999 688999999965
No 449
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=86.39 E-value=3.1 Score=36.17 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 105 SIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 105 ~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+++.+..+++.. ++||+.= |+.+.+|+.++..+|||+|.++
T Consensus 240 ~~~~i~~lr~~~--~~PvivK-gv~~~e~A~~a~~aGad~I~vs 280 (392)
T 2nzl_A 240 SWEDIKWLRRLT--SLPIVAK-GILRGDDAREAVKHGLNGILVS 280 (392)
T ss_dssp CHHHHHHHC--C--CSCEEEE-EECCHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHhh--CCCEEEE-ecCCHHHHHHHHHcCCCEEEeC
Confidence 344455555544 6898886 4689999999999999999994
No 450
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=86.36 E-value=3.2 Score=36.15 Aligned_cols=92 Identities=13% Similarity=0.195 Sum_probs=56.0
Q ss_pred HHHHHHHHhcC--CCEEEEeccCH-HHHHHHHH------cCCcEEEeeccCcCCCCCccchHHHHHHHHHHh---C-CCc
Q psy16780 54 SDVTWLKTITK--LPIVLKGILTA-EDAKIGVE------MGASAIMVSNHGGRQLDYVPASIEALPEIAKAV---G-HKV 120 (202)
Q Consensus 54 ~~i~~i~~~~~--~Pv~vK~~~~~-~~a~~l~~------aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~---~-~~i 120 (202)
+.++..++..+ .|+++ ++-+. ..+..+++ .|+|+|.+++.+.+. + ...+...++++.+ + +++
T Consensus 195 ~A~~~~~~~~p~~~~~~v-lvDT~d~~~~~al~~~~~~~~~~d~IrlDs~~~~~---g-d~~~~v~~~r~~ld~~G~~~~ 269 (395)
T 2i14_A 195 KAWKYFDEVIEEEVPRIA-LVDTFYDEKVEAVMAAEALGKKLFAVRLDTPSSRR---G-NFRKIIEEVRWELKVRGYDWV 269 (395)
T ss_dssp HHHHHHHHHSCSSSCCEE-ECCSSBCHHHHHHHHHTTTGGGCCEEEECCCTTTC---S-CHHHHHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHhCCCCccEEE-EeccchHHHHHHHHHHHHhccCCcEEEeCCCCCCc---c-cHHHHHHHHHHHHHhCCCCce
Confidence 46666666664 44554 55332 12222333 789999998753110 0 1222334443322 1 368
Q ss_pred EEEEecCCCCHHHHHHHHHhCCCEEEEcHHHH
Q psy16780 121 DVYLDGGVRYGTDVFKALALGAKMVFVGRPAL 152 (202)
Q Consensus 121 piia~GGI~~~~D~~kal~~GAd~V~ig~~~l 152 (202)
.|++|||| +.+.+.+..+. .|.+++|+.+.
T Consensus 270 ~I~aSggl-~~~~i~~l~~~-vD~~gvGt~l~ 299 (395)
T 2i14_A 270 KIFVSGGL-DEEKIKEIVDV-VDAFGVGGAIA 299 (395)
T ss_dssp EEEEESSC-CHHHHHTTGGG-CSEEEECHHHH
T ss_pred EEEEECCC-CHHHHHHHHHh-CCEEEeCcccC
Confidence 99999998 67777777778 99999999776
No 451
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=86.36 E-value=4.6 Score=34.39 Aligned_cols=83 Identities=25% Similarity=0.325 Sum_probs=56.2
Q ss_pred HHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeecc--------CcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCC
Q psy16780 59 LKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNH--------GGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRY 130 (202)
Q Consensus 59 i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~--------gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~ 130 (202)
+.+..+.-||+ -+.+.+.|+.+.++|+++|.+-+. +|. ....+.+.+.++++++ ++||++==-|..
T Consensus 12 ~~~~~kgGvI~-d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~---arm~~p~~i~~I~~av--~iPV~~K~rig~ 85 (330)
T 2yzr_A 12 FAKMVKHGVVM-DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGV---ARMSDPALIEEIMDAV--SIPVMAKCRIGH 85 (330)
T ss_dssp HHHTTTTSEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCC---CCCCCHHHHHHHHHHC--SSCEEEEEETTC
T ss_pred HHHHccCCcee-eCCHHHHHHHHHHcCCCEEEecCCccccccCCcch---hhcCCHHHHHHHHHhc--CCCeEEEEeecc
Confidence 33445667887 667899999999999999954321 221 1134677888888888 899998554533
Q ss_pred HHHHHHHHHhCCCEEEE
Q psy16780 131 GTDVFKALALGAKMVFV 147 (202)
Q Consensus 131 ~~D~~kal~~GAd~V~i 147 (202)
-.++.-.-++|||+|-.
T Consensus 86 ~~e~qilea~GaD~Id~ 102 (330)
T 2yzr_A 86 TTEALVLEAIGVDMIDE 102 (330)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHHcCCCEEeh
Confidence 44433333489999875
No 452
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=86.35 E-value=0.46 Score=37.42 Aligned_cols=41 Identities=20% Similarity=0.131 Sum_probs=32.9
Q ss_pred ccc-cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 49 ETI-NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 49 ~~~-~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
|.. .-++++++ +++|+++.+- .+.|+++. +++||++|+.++
T Consensus 136 Pg~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 136 PGAVAPKVARKI---PGRTVIAAGLVETEEEARE-ILKHVSAISTSS 178 (188)
T ss_dssp SGGGHHHHHTTS---TTSEEEEESCCCSHHHHHH-HTTTSSEEEECC
T ss_pred CCCchHHHHHHh---cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCC
Confidence 444 34567666 6899999864 79999999 999999998876
No 453
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=86.34 E-value=9.1 Score=31.88 Aligned_cols=89 Identities=19% Similarity=0.110 Sum_probs=57.3
Q ss_pred HHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccC-c--CC-CCCccchHHH-H---HHHHHHhCCCcEEEEec-
Q psy16780 56 VTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHG-G--RQ-LDYVPASIEA-L---PEIAKAVGHKVDVYLDG- 126 (202)
Q Consensus 56 i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g-g--~~-~~~~~~~~~~-l---~~i~~~~~~~ipiia~G- 126 (202)
++++.+. +-|+.+=...+.-.|+.+.++|+|+|-+++.+ + .. .|.++.+++. + +.+.+.. ++||+++.
T Consensus 7 lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~d 83 (290)
T 2hjp_A 7 LRAALDS-GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTV--SIPLIADID 83 (290)
T ss_dssp HHHHHHH-CCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTC--SSCEEEECT
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEECC
Confidence 4444432 56887767789999999999999999998631 1 11 1334445443 3 3333333 79999966
Q ss_pred -CCCCHHHHH----HHHHhCCCEEEE
Q psy16780 127 -GVRYGTDVF----KALALGAKMVFV 147 (202)
Q Consensus 127 -GI~~~~D~~----kal~~GAd~V~i 147 (202)
|-.++.++. +.+.+||++|-+
T Consensus 84 ~Gyg~~~~~~~~v~~l~~aGa~gv~i 109 (290)
T 2hjp_A 84 TGFGNAVNVHYVVPQYEAAGASAIVM 109 (290)
T ss_dssp TTTSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 444666554 344589999876
No 454
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=86.11 E-value=9.1 Score=32.82 Aligned_cols=129 Identities=12% Similarity=0.073 Sum_probs=68.5
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHH----HHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAK----IGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~----~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~G 126 (202)
.+..|+++.+ ++.||++|-. .+.++.. .+.+.|-+.+.+....+........++..++.+++.+ +.+||-.|+
T Consensus 124 N~pLL~~va~-~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~f-p~lpVG~Sd 201 (350)
T 3g8r_A 124 DWPLLERIAR-SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQY-AGVRIGYST 201 (350)
T ss_dssp CHHHHHHHHT-SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHC-TTSEEEEEE
T ss_pred CHHHHHHHHh-hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHC-CCCCEEcCC
Confidence 3567777764 5899999965 4665543 3445677644443321111111123455677776665 358987774
Q ss_pred CCC--CHHHHHHHHHhCCCEEEEcHHHHHHh--hhcChHH-HHHHHHHHHHHHHHHHHHhCCC
Q psy16780 127 GVR--YGTDVFKALALGAKMVFVGRPALWGL--AHSGKSG-VRKVLDILINEFDQALALSGCT 184 (202)
Q Consensus 127 GI~--~~~D~~kal~~GAd~V~ig~~~l~~~--~~~G~~~-v~~~i~~l~~~L~~~m~~~G~~ 184 (202)
--. ...-+..|+++||+.+-. .|--.- ...+..+ --+-+..|.++++..-..+|..
T Consensus 202 Ht~g~~~~~~~AAvAlGA~vIEk--H~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG~~ 262 (350)
T 3g8r_A 202 HEDPDLMEPIMLAVAQGATVFEK--HVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGDG 262 (350)
T ss_dssp CCCSSCCHHHHHHHHTTCCEEEE--EBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHCCT
T ss_pred CCCCCccHHHHHHHHcCCCEEEE--ecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 211 012345788999974432 211100 0111100 0134567777778888888863
No 455
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=86.02 E-value=2.4 Score=34.87 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=56.0
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC-CH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR-YG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~-~~ 131 (202)
++.++++++..++|++. .+.+++.+..+.+. +|.+.+..+. ..+...++++++ ...||+.+-|.. +.
T Consensus 76 l~~l~~~~~~~Gl~~~t-e~~d~~~~~~l~~~-vd~~kIga~~-------~~n~~ll~~~a~---~~kPV~lk~G~~~t~ 143 (262)
T 1zco_A 76 LRWMREAADEYGLVTVT-EVMDTRHVELVAKY-SDILQIGARN-------SQNFELLKEVGK---VENPVLLKRGMGNTI 143 (262)
T ss_dssp HHHHHHHHHHHTCEEEE-ECCCGGGHHHHHHH-CSEEEECGGG-------TTCHHHHHHHTT---SSSCEEEECCTTCCH
T ss_pred HHHHHHHHHHcCCcEEE-eeCCHHhHHHHHhh-CCEEEECccc-------ccCHHHHHHHHh---cCCcEEEecCCCCCH
Confidence 44667777778999886 67788888888888 9999996532 123445566543 379999999997 99
Q ss_pred HHHHHHHH
Q psy16780 132 TDVFKALA 139 (202)
Q Consensus 132 ~D~~kal~ 139 (202)
+++..+++
T Consensus 144 ~e~~~Av~ 151 (262)
T 1zco_A 144 QELLYSAE 151 (262)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998885
No 456
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=85.93 E-value=10 Score=29.70 Aligned_cols=78 Identities=19% Similarity=0.055 Sum_probs=51.5
Q ss_pred EEEec--cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHH-hCCCE
Q psy16780 68 VLKGI--LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALA-LGAKM 144 (202)
Q Consensus 68 ~vK~~--~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~-~GAd~ 144 (202)
.+|++ .++++++.+.++|+|++=+.-.... ....+.+...++.+.+++.+..++.===.+.+.+.+... ++.|+
T Consensus 2 ~vKICGit~~eda~~a~~~GaD~iGfif~~~S---pR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 78 (203)
T 1v5x_A 2 RVKICGITRLEDALLAEALGAFALGFVLAPGS---RRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQV 78 (203)
T ss_dssp EEEECCCCCHHHHHHHHHHTCSEEEEECCTTC---TTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSE
T ss_pred cEEEcCCCcHHHHHHHHHcCCCEEEEEecCCC---CCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 47876 6899999999999999876532111 011244556667666655555555422246777777765 69999
Q ss_pred EEEc
Q psy16780 145 VFVG 148 (202)
Q Consensus 145 V~ig 148 (202)
|++-
T Consensus 79 vQLH 82 (203)
T 1v5x_A 79 AQLH 82 (203)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 457
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=85.93 E-value=0.8 Score=37.64 Aligned_cols=41 Identities=22% Similarity=0.198 Sum_probs=34.7
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~ 93 (202)
..+.++++|+.++.||.+... .++++++.+.+ ++|+++|++
T Consensus 187 ~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 187 LQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred HHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 356899999999999999864 68999998876 699999965
No 458
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=85.89 E-value=3.4 Score=35.06 Aligned_cols=73 Identities=19% Similarity=0.198 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCcEEEee---ccCcCCCCCcc---chHHHHHHHHHHhCCCcEEEEec--CCCCHHHHHHHHHhCCCEEEE
Q psy16780 76 EDAKIGVEMGASAIMVS---NHGGRQLDYVP---ASIEALPEIAKAVGHKVDVYLDG--GVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~---~~gg~~~~~~~---~~~~~l~~i~~~~~~~ipiia~G--GI~~~~D~~kal~~GAd~V~i 147 (202)
+.++.+.++|+|.|.++ |.++.....++ .+++.++.+++.. .++++.+-+ |.....++.++.++|++.|-+
T Consensus 34 ~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~-~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I 112 (345)
T 1nvm_A 34 AIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEI-SHAQIATLLLPGIGSVHDLKNAYQAGARVVRV 112 (345)
T ss_dssp HHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTC-SSSEEEEEECBTTBCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhC-CCCEEEEEecCCcccHHHHHHHHhCCcCEEEE
Confidence 55788889999999995 12222222232 3556666666543 367887764 455789999999999999888
Q ss_pred cH
Q psy16780 148 GR 149 (202)
Q Consensus 148 g~ 149 (202)
..
T Consensus 113 ~~ 114 (345)
T 1nvm_A 113 AT 114 (345)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 459
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=85.78 E-value=1.3 Score=36.17 Aligned_cols=76 Identities=17% Similarity=0.139 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccc-hHHHHHHHHHHhCC-CcEEEEecCCCCHHHHHHH----HHhCCCEEEEcH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPA-SIEALPEIAKAVGH-KVDVYLDGGVRYGTDVFKA----LALGAKMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~-~ipiia~GGI~~~~D~~ka----l~~GAd~V~ig~ 149 (202)
.+++.+++.|||.|++.-.-|.-.++... -.+-+..+++..++ -+++|..-|.-+.+.+.++ ..+|||+|-.++
T Consensus 99 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTST 178 (239)
T 3ngj_A 99 YETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTST 178 (239)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCC
Confidence 56788999999999976432211111111 12234555555532 3788887777888889888 668999999886
Q ss_pred HH
Q psy16780 150 PA 151 (202)
Q Consensus 150 ~~ 151 (202)
.|
T Consensus 179 Gf 180 (239)
T 3ngj_A 179 GF 180 (239)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 460
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=85.59 E-value=1.4 Score=37.43 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=36.8
Q ss_pred cccHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcC-CcEEEee
Q psy16780 50 TINWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMG-ASAIMVS 92 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG-~d~I~v~ 92 (202)
...++.++++++.+++||+.-+. .++++++.+++.| +|.|.++
T Consensus 263 ~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 263 GYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp TTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEEC
T ss_pred cccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEec
Confidence 34678999999999999997655 6899999999999 9999883
No 461
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=85.57 E-value=11 Score=29.64 Aligned_cols=78 Identities=18% Similarity=-0.055 Sum_probs=51.6
Q ss_pred EEEec--cCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHH-hCCCE
Q psy16780 68 VLKGI--LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVRYGTDVFKALA-LGAKM 144 (202)
Q Consensus 68 ~vK~~--~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~-~GAd~ 144 (202)
.+|++ .++++++.+.++|+|++=+.-.... ....+.+...++.+.+++.+..++.===.+.+.+.+... ++.|+
T Consensus 3 ~vKICGit~~eda~~a~~~GaD~iGfif~~~S---pR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 79 (205)
T 1nsj_A 3 RVKICGITNLEDALFSVESGADAVGFVFYPKS---KRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNA 79 (205)
T ss_dssp EEEECCCCSHHHHHHHHHHTCSEEEEECCTTC---TTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSE
T ss_pred cEEECCCCcHHHHHHHHHcCCCEEEEEecCCC---CCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 47877 6899999999999999876532111 011244556667666655555554422246777777765 69999
Q ss_pred EEEc
Q psy16780 145 VFVG 148 (202)
Q Consensus 145 V~ig 148 (202)
|++-
T Consensus 80 vQLH 83 (205)
T 1nsj_A 80 VQLH 83 (205)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9983
No 462
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=85.50 E-value=0.55 Score=36.95 Aligned_cols=44 Identities=20% Similarity=0.215 Sum_probs=37.3
Q ss_pred cccHHHHHHHHHhcC-CCEEEEeccCHHHHHHHHHcCCcEEEeec
Q psy16780 50 TINWSDVTWLKTITK-LPIVLKGILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~-~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
...++.++++++.++ +||++-+-.+++.+..+.++|+|+|.++.
T Consensus 157 ~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 157 VQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp CCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESH
T ss_pred ccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhH
Confidence 346889999998887 99998776778888889999999999965
No 463
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=85.35 E-value=5 Score=33.54 Aligned_cols=73 Identities=16% Similarity=0.093 Sum_probs=44.3
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccc---hHHHHHHHHHHhC-CCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPA---SIEALPEIAKAVG-HKVDVYLDGGVRYGTDVFKALALGAKMVFVGRP 150 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~---~~~~l~~i~~~~~-~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~ 150 (202)
+.++...+.|||.|+|++-+.+......+ .++-+..+.+.+. .++||..+. .+++-+.+++.+||+.|-=-+.
T Consensus 50 ~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT--~~~~Va~aAl~aGa~iINdVsg 126 (294)
T 2y5s_A 50 RRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDT--YKPAVMRAALAAGADLINDIWG 126 (294)
T ss_dssp HHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEEC--CCHHHHHHHHHHTCSEEEETTT
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEC--CCHHHHHHHHHcCCCEEEECCC
Confidence 44678899999999998732221111111 1221111222222 268888766 6888899999999988865443
No 464
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=85.08 E-value=0.89 Score=39.29 Aligned_cols=42 Identities=21% Similarity=0.348 Sum_probs=36.1
Q ss_pred cHHHHHHHHHhc--CCCEEEE-eccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT--KLPIVLK-GILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK-~~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.++.|+++++.+ ++||+.= ++.+.+++..++++|||+|.+..
T Consensus 284 a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 284 STQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 328 (367)
T ss_dssp HHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 568999999999 8999854 45899999999999999999853
No 465
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=84.99 E-value=1.2 Score=37.23 Aligned_cols=68 Identities=22% Similarity=0.245 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEe-cCCCCHHHHHHHHHhCCCEEEEcHHHHHH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLD-GGVRYGTDVFKALALGAKMVFVGRPALWG 154 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~-GGI~~~~D~~kal~~GAd~V~ig~~~l~~ 154 (202)
+.++.+.++|||.|.+-+ .++.+.+.++.+.+ ++|++.. +|-...-+..+.-++|.+.|..+...+++
T Consensus 172 ~Ra~ay~eAGAd~i~~e~---------~~~~~~~~~i~~~~--~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 240 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLVG---------VRDFAHLEAIAEHL--HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFA 240 (287)
T ss_dssp HHHHHHHHTTCSEEEEEC---------CCSHHHHHHHHTTC--CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHHHH
T ss_pred HHHHHHHHcCCCEEEecC---------CCCHHHHHHHHHhC--CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 456788999999999853 34567778887777 6888843 33332334556667999999999988764
No 466
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=84.94 E-value=14 Score=30.20 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=36.6
Q ss_pred hccCccccHHHHHHHHHhcCCCEEEEec-------cC-------HHHHHHHHHcCCcEEEeec
Q psy16780 45 SQLDETINWSDVTWLKTITKLPIVLKGI-------LT-------AEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 45 ~~~d~~~~~~~i~~i~~~~~~Pv~vK~~-------~~-------~~~a~~l~~aG~d~I~v~~ 93 (202)
.+|-...+...++.+++.+++||.+=++ .+ .++++.+.++|+|+|+++-
T Consensus 32 ~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~ 94 (256)
T 1twd_A 32 KEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGV 94 (256)
T ss_dssp GGTCBCCCHHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ccCCCCCCHHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEee
Confidence 4455555677888889999999987554 12 2567889999999999864
No 467
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=84.77 E-value=4.1 Score=34.81 Aligned_cols=83 Identities=7% Similarity=-0.052 Sum_probs=56.9
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcC-CcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMG-ASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR 129 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~ 129 (202)
.++..+++++.+++||+.-+. .++++++.+++.| +|.|.+.-. .-++......+..+++.. .++++..+..-
T Consensus 225 ~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~----~~GGit~~~~i~~~A~~~--g~~~~~~~~~e 298 (379)
T 2rdx_A 225 SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKIS----NLGGLSKARRTRDFLIDN--RMPVVAEDSWG 298 (379)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETT----TTTSHHHHHHHHHHHHHT--TCCEEEECSBC
T ss_pred CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecc----ccCCHHHHHHHHHHHHHc--CCeEEEeeccC
Confidence 788999999999999998776 5788998887665 898887432 112333344445555555 78888876666
Q ss_pred CHHHHHHHHHh
Q psy16780 130 YGTDVFKALAL 140 (202)
Q Consensus 130 ~~~D~~kal~~ 140 (202)
++.-...++.+
T Consensus 299 s~i~~~a~~~l 309 (379)
T 2rdx_A 299 GEIASAAVAHF 309 (379)
T ss_dssp SHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 66555544443
No 468
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=84.52 E-value=6.7 Score=32.93 Aligned_cols=83 Identities=18% Similarity=0.113 Sum_probs=59.8
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC-CH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR-YG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~-~~ 131 (202)
.+.+++++++.++|++- .+.+++.+..+.+. +|.+.+.... ..+.+.++++.+ . ..||+.+-|.. +.
T Consensus 101 L~~L~~~~~e~GLpv~T-ev~D~~~v~~l~~~-vd~lkIgA~~-------~~n~~LLr~va~-~--gkPVilK~Gms~t~ 168 (298)
T 3fs2_A 101 LEVFSDLKKEYGFPVLT-DIHTEEQCAAVAPV-VDVLQIPAFL-------CRQTDLLIAAAR-T--GRVVNVKKGQFLAP 168 (298)
T ss_dssp HHHHHHHHHHHCCCEEE-ECCSHHHHHHHTTT-CSEEEECGGG-------TTCHHHHHHHHH-T--TSEEEEECCTTCCG
T ss_pred HHHHHHHHHhcCCeEEE-EeCCHHHHHHHHhh-CCEEEECccc-------cCCHHHHHHHHc-c--CCcEEEeCCCCCCH
Confidence 34667777778999885 67899999999888 9999986542 224556666643 3 78999999995 88
Q ss_pred HHHHHHHH----hCCCEEEE
Q psy16780 132 TDVFKALA----LGAKMVFV 147 (202)
Q Consensus 132 ~D~~kal~----~GAd~V~i 147 (202)
+|+..+.+ .|.+-|.+
T Consensus 169 ~ei~~ave~i~~~Gn~~iiL 188 (298)
T 3fs2_A 169 WDMKNVLAKITESGNPNVLA 188 (298)
T ss_dssp GGHHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHHHHHHcCCCeEEE
Confidence 77766554 47654544
No 469
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=84.44 E-value=3.8 Score=33.77 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=42.1
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHH----HHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHh--CCCEEE
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIE----ALPEIAKAVGHKVDVYLDGGVRYGTDVFKALAL--GAKMVF 146 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~----~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~--GAd~V~ 146 (202)
+.++...+.|||.|+|.+... ....++ .+..+++.. ++||..++ .+++-+.+++.+ |++.+-
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~-----~~eE~~rv~~vi~~l~~~~--~~pisIDT--~~~~v~~aal~a~~Ga~iIN 105 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPT-----ADDPVRVMEWLVKTIQEVV--DLPCCLDS--TNPDAIEAGLKVHRGHAMIN 105 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSC-----SSCHHHHHHHHHHHHHHHC--CCCEEEEC--SCHHHHHHHHHHCCSCCEEE
T ss_pred HHHHHHHHCCCCEEEEcCCcC-----chhHHHHHHHHHHHHHHhC--CCeEEEeC--CCHHHHHHHHHhCCCCCEEE
Confidence 346778899999999976431 111222 234444444 78888877 488888888888 998886
No 470
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=84.36 E-value=8 Score=37.58 Aligned_cols=91 Identities=16% Similarity=0.047 Sum_probs=55.7
Q ss_pred HHHHHHHhc-CCCEEEEec--cCH----HHHHHHHHcCCcEEEeeccC-cC-CCC--Cc--cch----HHHHHHHHHHhC
Q psy16780 55 DVTWLKTIT-KLPIVLKGI--LTA----EDAKIGVEMGASAIMVSNHG-GR-QLD--YV--PAS----IEALPEIAKAVG 117 (202)
Q Consensus 55 ~i~~i~~~~-~~Pv~vK~~--~~~----~~a~~l~~aG~d~I~v~~~g-g~-~~~--~~--~~~----~~~l~~i~~~~~ 117 (202)
.++++++.. +.|+++=+. .++ +.++.+.++|+|+|.+.-.- -+ ... +. ... .+.+..+++.+
T Consensus 624 ~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~- 702 (1025)
T 1gte_A 624 SVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV- 702 (1025)
T ss_dssp HHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-
Confidence 456667655 678887552 334 44567778999999996421 11 000 11 012 23455555555
Q ss_pred CCcEEEE--ecCCCCHHHHHHHH-HhCCCEEEE
Q psy16780 118 HKVDVYL--DGGVRYGTDVFKAL-ALGAKMVFV 147 (202)
Q Consensus 118 ~~ipiia--~GGI~~~~D~~kal-~~GAd~V~i 147 (202)
++||+. +.++.+..++++++ +.|+|++.+
T Consensus 703 -~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 703 -QIPFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp -SSCEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred -CCceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 688886 56677777766665 589999998
No 471
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=84.21 E-value=9.4 Score=31.85 Aligned_cols=90 Identities=21% Similarity=0.108 Sum_probs=55.2
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccC-cCC---CCCccchHH----HHHHHHHHhCCCcEEEEec
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHG-GRQ---LDYVPASIE----ALPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g-g~~---~~~~~~~~~----~l~~i~~~~~~~ipiia~G 126 (202)
.++++.+ .+-|+.+=...+.-.|+.+.++|+|+|-+++.+ +.. .|.+..+++ .++.+.+.. ++||+++.
T Consensus 10 ~lr~l~~-~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~ 86 (295)
T 1s2w_A 10 QLKQMLN-SKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS--DVPILLDA 86 (295)
T ss_dssp HHHHHHH-SSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC--SSCEEEEC
T ss_pred HHHHHHh-CCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEecC
Confidence 3444443 256887777789999999999999999998631 111 122233333 233444444 79999975
Q ss_pred --CCCCHHHHH----HHHHhCCCEEEE
Q psy16780 127 --GVRYGTDVF----KALALGAKMVFV 147 (202)
Q Consensus 127 --GI~~~~D~~----kal~~GAd~V~i 147 (202)
|-.+..++. +.+.+||.+|-+
T Consensus 87 d~Gyg~~~~v~~~v~~l~~aGaagv~i 113 (295)
T 1s2w_A 87 DTGYGNFNNARRLVRKLEDRGVAGACL 113 (295)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 445655554 344589999876
No 472
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=84.20 E-value=1.3 Score=37.71 Aligned_cols=41 Identities=22% Similarity=0.228 Sum_probs=35.8
Q ss_pred ccHHHHHHHHHhc-CCCEEEEec-cCHHHHHHHHHcCCcEEEee
Q psy16780 51 INWSDVTWLKTIT-KLPIVLKGI-LTAEDAKIGVEMGASAIMVS 92 (202)
Q Consensus 51 ~~~~~i~~i~~~~-~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~ 92 (202)
..|+.++++++.+ ++||++-+. .+++++..+++ |+|+|.++
T Consensus 183 ~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 183 LRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp CCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred ccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 4689999999998 899997654 78999999998 99999885
No 473
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae}
Probab=84.17 E-value=8.8 Score=32.72 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=62.6
Q ss_pred cHHHHHHHHHh-c--CCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCC------------ccchHHHHHHH---H
Q psy16780 52 NWSDVTWLKTI-T--KLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDY------------VPASIEALPEI---A 113 (202)
Q Consensus 52 ~~~~i~~i~~~-~--~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~------------~~~~~~~l~~i---~ 113 (202)
+|+=|+.++.. . ++++-+=++++...+..+.++|+..|... -||-.++ +.+....+..+ .
T Consensus 148 T~eGi~A~~~L~~~eGI~vNvTLiFS~~Qa~aaa~AGa~~iSpF--VgRidd~~~~~~~~~~~~~~d~Gv~~v~~iy~~y 225 (339)
T 3cq0_A 148 TWEGIQAARELEVKHGIHCNMTLLFSFTQAVACAEANVTLISPF--VGRIMDFYKALSGKDYTAETDPGVLSVKKIYSYY 225 (339)
T ss_dssp SHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHTTCSEEEEB--SHHHHHHHHHC---CCCTTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCceeEeeeCCHHHHHHHHHcCCcEEEec--ccHHHHHhhhhcccccccccChHHHHHHHHHHHH
Confidence 35545544443 2 67777777788888888899998877653 2221110 11123333333 3
Q ss_pred HHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhh
Q psy16780 114 KAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLA 156 (202)
Q Consensus 114 ~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~ 156 (202)
+....+.-|++ -.+|+..++.. .+|+|.+-+.-.++..+.
T Consensus 226 ~~~~~~T~v~~-AS~r~~~~V~~--LaG~d~vTipp~~l~~l~ 265 (339)
T 3cq0_A 226 KRHGYATEVMA-ASFRNLDELKA--LAGIDNMTLPLNLLEQLY 265 (339)
T ss_dssp HHHTCCCEEEE-BCCCSHHHHHH--HTTSSEEEEEHHHHHHHH
T ss_pred HHcCCCcEEEe-cCCCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 33333454555 56999999997 579999999988887654
No 474
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=84.16 E-value=13 Score=30.33 Aligned_cols=90 Identities=20% Similarity=0.157 Sum_probs=58.1
Q ss_pred HHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeecc-CcC--C-CCCccchHHH----HHHHHHHhCCCcEEEEec
Q psy16780 55 DVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNH-GGR--Q-LDYVPASIEA----LPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 55 ~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~-gg~--~-~~~~~~~~~~----l~~i~~~~~~~ipiia~G 126 (202)
.++++++. +-|+.+=...+.-.|+.+.++|+|.|-+++. -+. . .|..+.+++. .+.+++.. ++||+++.
T Consensus 11 ~lr~l~~~-~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~ 87 (255)
T 2qiw_A 11 KFASDHES-GKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV--SIPVSVDV 87 (255)
T ss_dssp HHHHHHHT-CCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC--SSCEEEEC
T ss_pred HHHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC--CCCEEecc
Confidence 34444432 5677765668899999999999999999863 111 1 1333444442 34455555 69999976
Q ss_pred CCCC----HHHHHHHHHhCCCEEEE
Q psy16780 127 GVRY----GTDVFKALALGAKMVFV 147 (202)
Q Consensus 127 GI~~----~~D~~kal~~GAd~V~i 147 (202)
--.. ...+.+.+.+||++|-+
T Consensus 88 ~~Gyg~~~~~~~~~l~~aGa~gv~i 112 (255)
T 2qiw_A 88 ESGYGLSPADLIAQILEAGAVGINV 112 (255)
T ss_dssp TTCTTCCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCcHHHHHHHHHHHcCCcEEEE
Confidence 3222 45566677789999976
No 475
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1
Probab=84.07 E-value=5.4 Score=33.98 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=61.7
Q ss_pred cHHHHHHHHHh--cCCCEEEEeccCHHHHHHHHHcCCcEEEeec-c---------CcCCCCC-ccchHHHHHHHHH---H
Q psy16780 52 NWSDVTWLKTI--TKLPIVLKGILTAEDAKIGVEMGASAIMVSN-H---------GGRQLDY-VPASIEALPEIAK---A 115 (202)
Q Consensus 52 ~~~~i~~i~~~--~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~-~---------gg~~~~~-~~~~~~~l~~i~~---~ 115 (202)
+|+=++.++.. -++++-+=.+++...+..+.++|+..|...- + ++..... ..+....+.++.+ .
T Consensus 144 T~eGl~A~~~L~~~GI~~N~TliFS~~Qa~aaA~AGa~~ISPFVgRidd~~~~~~~~~~~~~~~~~Gv~~v~~i~~~y~~ 223 (329)
T 3m16_A 144 TWEGIQAAKILEAEGIHCNLTLLFHFAQAQACAEAGTTLISPFVGRILDWYKANSGQSEYSASEDPGVVSVTEIYNFYKS 223 (329)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEBHHHHHHHHHTTSSCCCCCTTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEeehhHHHHHhhhcccccccccccCcHHHHHHHHHHHHHH
Confidence 35544444432 2677777777888899999999998887531 1 1111100 0122334444433 3
Q ss_pred hCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcHHHHHHhh
Q psy16780 116 VGHKVDVYLDGGVRYGTDVFKALALGAKMVFVGRPALWGLA 156 (202)
Q Consensus 116 ~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~~~l~~~~ 156 (202)
.+.+.-|++ -.+|+..++.. .+|||.+-+.-.++..+.
T Consensus 224 ~g~~T~v~~-ASfRn~~~V~a--LaG~d~vTipp~~l~~l~ 261 (329)
T 3m16_A 224 HGFKTIVMG-ASFRNTGEIEE--LAGCDRLTISPELLAQLE 261 (329)
T ss_dssp TTCCCEEEE-BCCSCHHHHHT--TTTSSEEEECHHHHHHHH
T ss_pred cCCCCEEEe-CCCCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 333444444 56999999984 469999999988887654
No 476
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=83.92 E-value=11 Score=31.20 Aligned_cols=95 Identities=19% Similarity=0.153 Sum_probs=58.3
Q ss_pred cCccccHHHHHHHHHhcCCCEEEEecc---------CHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhC
Q psy16780 47 LDETINWSDVTWLKTITKLPIVLKGIL---------TAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVG 117 (202)
Q Consensus 47 ~d~~~~~~~i~~i~~~~~~Pv~vK~~~---------~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~ 117 (202)
..|+ ..+.|+-.+ ..++++..++.. -.+..+.+.+.|.+.|.+|...- ..+.-+.++-+.++.
T Consensus 78 l~~~-l~ekI~l~~-~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti-----~l~~~~~~~lI~~a~- 149 (276)
T 1u83_A 78 LTKD-LEEKISTLK-EHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTL-----PMTNKEKAAYIADFS- 149 (276)
T ss_dssp GCTT-HHHHHHHHH-HTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSS-----CCCHHHHHHHHHHHT-
T ss_pred hhHH-HHHHHHHHH-HcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcc-----cCCHHHHHHHHHHHH-
Confidence 3444 444555444 459999998741 23567889999999999987421 122323333344433
Q ss_pred CCcEEEEecCCCCH------------HHHHHHHHhCCCEEEEcH
Q psy16780 118 HKVDVYLDGGVRYG------------TDVFKALALGAKMVFVGR 149 (202)
Q Consensus 118 ~~ipiia~GGI~~~------------~D~~kal~~GAd~V~ig~ 149 (202)
+...|+..=|..++ +.+.+.|++||+.|++=.
T Consensus 150 ~~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 193 (276)
T 1u83_A 150 DEFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEA 193 (276)
T ss_dssp TTSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC-
T ss_pred hhcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 34667776566555 344567779999999865
No 477
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=83.65 E-value=1.2 Score=37.72 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=36.2
Q ss_pred ccHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcC-CcEEEee
Q psy16780 51 INWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMG-ASAIMVS 92 (202)
Q Consensus 51 ~~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG-~d~I~v~ 92 (202)
..++.++++++.+++||+.-+. .+++++..+++.| +|.|.++
T Consensus 264 ~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 264 YQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp TTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEEC
T ss_pred chHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeec
Confidence 4578899999999999997665 5899999999998 9999883
No 478
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=83.64 E-value=4.7 Score=34.71 Aligned_cols=91 Identities=15% Similarity=0.030 Sum_probs=61.3
Q ss_pred CccccHHHHHHHHHhc--CCCEEEEec--cCHHHHHHHH-Hc--CCc-EEEeeccCcCCCCCccchHHHHHHHHHHhCCC
Q psy16780 48 DETINWSDVTWLKTIT--KLPIVLKGI--LTAEDAKIGV-EM--GAS-AIMVSNHGGRQLDYVPASIEALPEIAKAVGHK 119 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~--~~Pv~vK~~--~~~~~a~~l~-~a--G~d-~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 119 (202)
+++...+.++++|+.+ ++++.+... .+++++..+. .. +.+ .|. ...++++.+.++++.. .
T Consensus 176 ~~~~d~~~v~avR~a~G~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~i~iE----------eP~~~~~~~~~l~~~~--~ 243 (386)
T 3fv9_G 176 GPALDAERITACLADRQPGEWYLADANNGLTVEHALRMLSLLPPGLDIVLE----------APCASWAETKSLRARC--A 243 (386)
T ss_dssp HHHHHHHHHHHHTTTCCTTCEEEEECTTCCCHHHHHHHHHHSCSSCCCEEE----------CCCSSHHHHHHHHTTC--C
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHhhccCCcEEe----------cCCCCHHHHHHHHhhC--C
Confidence 3455667888888876 567777753 5666664432 22 111 221 1123566667776655 7
Q ss_pred cEEEEecCCCCHHHHHHHHHhC-CCEEEEcHH
Q psy16780 120 VDVYLDGGVRYGTDVFKALALG-AKMVFVGRP 150 (202)
Q Consensus 120 ipiia~GGI~~~~D~~kal~~G-Ad~V~ig~~ 150 (202)
+||.++..+.+..|+.+++..| +|.|++--.
T Consensus 244 iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~ 275 (386)
T 3fv9_G 244 LPLLLDELIQTETDLIAAIRDDLCDGVGLKVS 275 (386)
T ss_dssp SCEEESTTCCSHHHHHHHHHTTCCSEEEEEHH
T ss_pred CCEEeCCCcCCHHHHHHHHHhCCCCEEEECcc
Confidence 9999999999999999999986 899988643
No 479
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=83.61 E-value=0.79 Score=39.31 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=35.6
Q ss_pred cHHHHHHHHHhc--CCCEEEE-eccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT--KLPIVLK-GILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK-~~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.++.+.++++.+ ++||+.= ++.+.+++.+++.+|||+|.+..
T Consensus 261 a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igr 305 (345)
T 3oix_A 261 ALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGT 305 (345)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEECh
Confidence 478999999998 6998854 46899999999999999999843
No 480
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=83.38 E-value=3.5 Score=34.83 Aligned_cols=68 Identities=24% Similarity=0.199 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCcc---chHH----HHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEE
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVP---ASIE----ALPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFV 147 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~---~~~~----~l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~i 147 (202)
+.++.+.+.|||.|+|++-..+...... ..++ .+..+++.. ++||-.+. .+++-+..++.+||+.|-=
T Consensus 37 ~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~--~vpiSIDT--~~~~Va~aAl~aGa~iIND 111 (314)
T 2vef_A 37 QQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES--DVLISIDT--WKSQVAEAALAAGADLVND 111 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC--CCEEEEEC--SCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC--CceEEEeC--CCHHHHHHHHHcCCCEEEE
Confidence 3367789999999999773211100000 0111 122233332 67877765 6788888888888887763
No 481
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=83.25 E-value=20 Score=30.27 Aligned_cols=90 Identities=23% Similarity=0.231 Sum_probs=58.6
Q ss_pred HHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccC-c---CC-CCCccchHHH----HHHHHHHhCCCcEEEEec
Q psy16780 56 VTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHG-G---RQ-LDYVPASIEA----LPEIAKAVGHKVDVYLDG 126 (202)
Q Consensus 56 i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~g-g---~~-~~~~~~~~~~----l~~i~~~~~~~ipiia~G 126 (202)
++++.+. +-|+.+=...+.-.|+.+.++|+|+|-+++.+ + .. .|.+..+++. ++.+.+.. .++||+++.
T Consensus 31 lr~l~~~-~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~-~~~PviaD~ 108 (318)
T 1zlp_A 31 MHRLIEE-HGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAA-PNLCVVVDG 108 (318)
T ss_dssp HHHHHHH-SSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHS-SSSEEEEEC
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhc-cCCCEEEeC
Confidence 4444432 46887777789999999999999999998731 1 11 2334444443 34444443 269999976
Q ss_pred --CCCCHHHHH----HHHHhCCCEEEE
Q psy16780 127 --GVRYGTDVF----KALALGAKMVFV 147 (202)
Q Consensus 127 --GI~~~~D~~----kal~~GAd~V~i 147 (202)
|-.++.++. +.+.+||.+|-+
T Consensus 109 d~Gyg~~~~v~~tv~~l~~aGaagv~i 135 (318)
T 1zlp_A 109 DTGGGGPLNVQRFIRELISAGAKGVFL 135 (318)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 444665554 345589999876
No 482
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=83.25 E-value=11 Score=27.29 Aligned_cols=94 Identities=12% Similarity=-0.008 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHhcCCCEEEEeccCHHHH-HHHHHcCCcEEEeecc-CcCCCCCccchHHHHHHHHHHh-CCCcEEEEec
Q psy16780 50 TINWSDVTWLKTITKLPIVLKGILTAEDA-KIGVEMGASAIMVSNH-GGRQLDYVPASIEALPEIAKAV-GHKVDVYLDG 126 (202)
Q Consensus 50 ~~~~~~i~~i~~~~~~Pv~vK~~~~~~~a-~~l~~aG~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~-~~~ipiia~G 126 (202)
....+.++.+-+..+..++ ....+.+.| +.+.+...|.|.++-. ++ ..-++.++.+++.- ..++|||...
T Consensus 22 ~~~r~~l~~~L~~~G~~~v-~~a~~g~~al~~~~~~~~DlillD~~MP~------mdG~el~~~ir~~~~~~~ipvI~lT 94 (134)
T 3to5_A 22 STMRRIVKNLLRDLGFNNT-QEADDGLTALPMLKKGDFDFVVTDWNMPG------MQGIDLLKNIRADEELKHLPVLMIT 94 (134)
T ss_dssp HHHHHHHHHHHHHTTCCCE-EEESSHHHHHHHHHHHCCSEEEEESCCSS------SCHHHHHHHHHHSTTTTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCcEE-EEECCHHHHHHHHHhCCCCEEEEcCCCCC------CCHHHHHHHHHhCCCCCCCeEEEEE
Confidence 3345566666666665422 234555555 3445566888877643 11 12345666765432 2369999988
Q ss_pred CCCCHHHHHHHHHhCCCEEEEcHHH
Q psy16780 127 GVRYGTDVFKALALGAKMVFVGRPA 151 (202)
Q Consensus 127 GI~~~~D~~kal~~GAd~V~ig~~~ 151 (202)
+-.+.++..+++.+||+.+. ..||
T Consensus 95 a~~~~~~~~~~~~~Ga~~yl-~KP~ 118 (134)
T 3to5_A 95 AEAKREQIIEAAQAGVNGYI-VKPF 118 (134)
T ss_dssp SSCCHHHHHHHHHTTCCEEE-ESSC
T ss_pred CCCCHHHHHHHHHCCCCEEE-ECCC
Confidence 99999999999999999775 4555
No 483
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=83.13 E-value=3.5 Score=32.79 Aligned_cols=89 Identities=7% Similarity=0.011 Sum_probs=50.0
Q ss_pred HHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeeccCcCCCCCccc---hHHHHHHHHHHhCCCcEEEEecCCC
Q psy16780 54 SDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPA---SIEALPEIAKAVGHKVDVYLDGGVR 129 (202)
Q Consensus 54 ~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~---~~~~l~~i~~~~~~~ipiia~GGI~ 129 (202)
+.++.+++ .++.+.+-.. ........+.+..+|.|.++..--+.....+. -...+..+++.+ .+.+|+.| |-
T Consensus 147 ~~l~~L~~-~G~~ialDdfG~g~s~l~~L~~l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l--~~~viaeG-VE 222 (250)
T 4f3h_A 147 QFLASVSA-MGCKVGLEQFGSGLDSFQLLAHFQPAFLKLDRSITGDIASARESQEKIREITSRAQPT--GILTVAEF-VA 222 (250)
T ss_dssp HHHHHHHT-TTCEEEEEEETSSTHHHHHHTTSCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHH--TCEEEECC-CC
T ss_pred HHHHHHHH-CCCEEEEeCCCCCchHHHHHhhCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHc--CCEEEEec-cC
Confidence 34444443 2555555433 23344555556666666665321011111111 223334445555 78899865 99
Q ss_pred CHHHHHHHHHhCCCEEE
Q psy16780 130 YGTDVFKALALGAKMVF 146 (202)
Q Consensus 130 ~~~D~~kal~~GAd~V~ 146 (202)
|.++...+..+|++.++
T Consensus 223 t~~~~~~l~~~G~~~~Q 239 (250)
T 4f3h_A 223 DAQSMSSFFTAGVDYVQ 239 (250)
T ss_dssp CHHHHHHHHHHTCSEEC
T ss_pred CHHHHHHHHHcCCCEEe
Confidence 99999999999999875
No 484
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=83.12 E-value=1.3 Score=36.43 Aligned_cols=41 Identities=24% Similarity=0.257 Sum_probs=35.1
Q ss_pred HHHHHHHHHhcCCCEEEEe-ccCHHHHHHHHHcCCcEEEeec
Q psy16780 53 WSDVTWLKTITKLPIVLKG-ILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
++.++++++.+++||+.-+ +.+++++..++++|+|+|.++.
T Consensus 230 ~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~ 271 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVGT 271 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 5788999998899999754 4689999999999999998853
No 485
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=83.11 E-value=9.9 Score=31.34 Aligned_cols=39 Identities=10% Similarity=0.166 Sum_probs=28.2
Q ss_pred HHHHHHHhc--CCCEEEEec-cC----HHHHHHHHHcCCcEEEeec
Q psy16780 55 DVTWLKTIT--KLPIVLKGI-LT----AEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 55 ~i~~i~~~~--~~Pv~vK~~-~~----~~~a~~l~~aG~d~I~v~~ 93 (202)
+++.+.+.+ ++||++... .+ .+.++.+.++|+|++.+..
T Consensus 58 v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 58 VVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC
Confidence 555555554 689998865 22 4567888999999998864
No 486
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=83.04 E-value=4.9 Score=32.00 Aligned_cols=91 Identities=9% Similarity=0.071 Sum_probs=51.8
Q ss_pred cHHHHHHHHHhcCCCEEEEec-cCHHHHHHHHHcCCcEEEeeccCcCCCCCccc---hHHHHHHHHHHhCCCcEEEEecC
Q psy16780 52 NWSDVTWLKTITKLPIVLKGI-LTAEDAKIGVEMGASAIMVSNHGGRQLDYVPA---SIEALPEIAKAVGHKVDVYLDGG 127 (202)
Q Consensus 52 ~~~~i~~i~~~~~~Pv~vK~~-~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~---~~~~l~~i~~~~~~~ipiia~GG 127 (202)
..+.++.+++. ++.+.+-.. ........+....+|.|.++..--+....... -...+..+++.+ .+.+|+.|
T Consensus 141 ~~~~l~~l~~~-G~~ialDdfG~g~ssl~~L~~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~--g~~viaeG- 216 (259)
T 3s83_A 141 AAVILKTLRDA-GAGLALDDFGTGFSSLSYLTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDL--DLEVVAEG- 216 (259)
T ss_dssp HHHHHHHHHHH-TCEEEEECC---CHHHHHHHHSCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHT--TCEEEECC-
T ss_pred HHHHHHHHHHC-CCEEEEECCCCCchhHHHHHhCCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHC--CCeEEEEe-
Confidence 33445555543 555555433 22344556666677777775421001111111 123344445555 78899865
Q ss_pred CCCHHHHHHHHHhCCCEEE
Q psy16780 128 VRYGTDVFKALALGAKMVF 146 (202)
Q Consensus 128 I~~~~D~~kal~~GAd~V~ 146 (202)
|-|.++...+..+|++.++
T Consensus 217 VEt~~~~~~l~~lG~~~~Q 235 (259)
T 3s83_A 217 VENAEMAHALQSLGCDYGQ 235 (259)
T ss_dssp CCSHHHHHHHHHHTCCEEC
T ss_pred CCCHHHHHHHHhcCCCEee
Confidence 9999999999999999876
No 487
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=83.03 E-value=1.1 Score=39.65 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=35.9
Q ss_pred cHHHHHHHHHhc--CCCEEEE-eccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT--KLPIVLK-GILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK-~~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.++.++++++.+ ++|||.= ++.+.+++..++.+|||.|.+..
T Consensus 359 sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigr 403 (443)
T 1tv5_A 359 STKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYS 403 (443)
T ss_dssp HHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESH
T ss_pred HHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 468899999998 8999844 46899999999999999998843
No 488
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.99 E-value=11 Score=31.46 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=29.0
Q ss_pred HHHHHHHHhc-CCCEEEEec-cC----HHHHHHHHHcCCcEEEeec
Q psy16780 54 SDVTWLKTIT-KLPIVLKGI-LT----AEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 54 ~~i~~i~~~~-~~Pv~vK~~-~~----~~~a~~l~~aG~d~I~v~~ 93 (202)
++++.+.+.+ ++||++... .+ .+.++.+.++|+|++.+..
T Consensus 65 ~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 65 AVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp HHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3566666555 789999764 22 4667889999999998853
No 489
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=82.49 E-value=0.8 Score=36.76 Aligned_cols=43 Identities=21% Similarity=0.207 Sum_probs=36.4
Q ss_pred ccHHHHHHHHHhc-----CCCEEEEeccCHHHHHHHHHcCCcEEEeec
Q psy16780 51 INWSDVTWLKTIT-----KLPIVLKGILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 51 ~~~~~i~~i~~~~-----~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
...+.++++|+.. ++|+.+-+..+.+.+..+.++|+|+++++.
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGS 202 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGS 202 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESH
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECH
Confidence 3577888888877 799998887777999999999999999854
No 490
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=81.97 E-value=4.6 Score=34.69 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=60.8
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC-CH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR-YG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~-~~ 131 (202)
++.++++++..++|++. .+.+++.+..+.+. +|.+.+..+. ..+...++++.+ ...||+.+-|.. |.
T Consensus 159 l~~l~~~~~e~Gl~~~t-e~~d~~~~~~l~~~-vd~lkIgAr~-------~~n~~LL~~va~---~~kPVilk~G~~~tl 226 (350)
T 1vr6_A 159 LEYLREAADKYGMYVVT-EALGEDDLPKVAEY-ADIIQIGARN-------AQNFRLLSKAGS---YNKPVLLKRGFMNTI 226 (350)
T ss_dssp HHHHHHHHHHHTCEEEE-ECSSGGGHHHHHHH-CSEEEECGGG-------TTCHHHHHHHHT---TCSCEEEECCTTCCH
T ss_pred HHHHHHHHHHcCCcEEE-EeCCHHHHHHHHHh-CCEEEECccc-------ccCHHHHHHHHc---cCCcEEEcCCCCCCH
Confidence 45777777788999886 67888888888888 9999996532 224456666652 379999999997 88
Q ss_pred HHHHHHHH----hCCCEEEE
Q psy16780 132 TDVFKALA----LGAKMVFV 147 (202)
Q Consensus 132 ~D~~kal~----~GAd~V~i 147 (202)
+++..|+. .|..-+.+
T Consensus 227 ~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 227 EEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp HHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHCCCCeEEE
Confidence 88887765 47643444
No 491
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=81.95 E-value=21 Score=29.70 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=28.5
Q ss_pred HHHHHHHHhc--CCCEEEEec-cC----HHHHHHHHHcCC-cEEEeec
Q psy16780 54 SDVTWLKTIT--KLPIVLKGI-LT----AEDAKIGVEMGA-SAIMVSN 93 (202)
Q Consensus 54 ~~i~~i~~~~--~~Pv~vK~~-~~----~~~a~~l~~aG~-d~I~v~~ 93 (202)
++++.+.+.+ ++||++... .+ .+.++.+.++|+ |++.+..
T Consensus 64 ~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 64 ELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 3666666665 689999765 22 455778899997 9998763
No 492
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=81.66 E-value=5 Score=33.56 Aligned_cols=69 Identities=28% Similarity=0.218 Sum_probs=38.9
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCC-C--CccchHHHHHHHHHHh-CCCcEEEEecCCCCHHHHHHHHHhCCCEEE
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQL-D--YVPASIEALPEIAKAV-GHKVDVYLDGGVRYGTDVFKALALGAKMVF 146 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~-~--~~~~~~~~l~~i~~~~-~~~ipiia~GGI~~~~D~~kal~~GAd~V~ 146 (202)
+.++...+.|||.|+|++-+.+.. . .....++-+..+.+.+ ..++||..+. .+++-+.+++.+||+.|-
T Consensus 56 ~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT--~~~~Va~aAl~aGa~iIN 128 (294)
T 2dqw_A 56 ERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDT--RKPEVAEEALKLGAHLLN 128 (294)
T ss_dssp HHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEEC--SCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEC--CCHHHHHHHHHhCCCEEE
Confidence 557888999999999987321110 0 0111222111111222 1267777765 678888888888887664
No 493
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=81.36 E-value=1.8 Score=35.94 Aligned_cols=42 Identities=24% Similarity=0.264 Sum_probs=35.8
Q ss_pred cHHHHHHHHHhc--CCCEEEEe-ccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT--KLPIVLKG-ILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK~-~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.++.++++++.+ ++||+.=+ +.+++++..++.+|||+|.++.
T Consensus 228 ~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~ 272 (311)
T 1jub_A 228 ALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGT 272 (311)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEch
Confidence 478999999998 89998654 5799999999999999999854
No 494
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=81.32 E-value=5.1 Score=33.23 Aligned_cols=72 Identities=18% Similarity=0.119 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCC-C--CccchHHHHHHHHHHh-CCCcEEEEecCCCCHHHHHHHHHhCCCEEEEcH
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQL-D--YVPASIEALPEIAKAV-GHKVDVYLDGGVRYGTDVFKALALGAKMVFVGR 149 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~-~--~~~~~~~~l~~i~~~~-~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig~ 149 (202)
+.++...+.|||.|+|++-..+.. . .....+.-+..+.+.+ ..++||..+. .+++-+..++.+||+.|-=-+
T Consensus 33 ~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT--~~~~va~aAl~aGa~iINdvs 108 (280)
T 1eye_A 33 KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDT--MRADVARAALQNGAQMVNDVS 108 (280)
T ss_dssp HHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEEC--SCHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeC--CCHHHHHHHHHcCCCEEEECC
Confidence 346778999999999986321110 0 0011122111111212 1167887765 688888888888888876544
No 495
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=81.24 E-value=22 Score=29.52 Aligned_cols=89 Identities=18% Similarity=0.088 Sum_probs=0.0
Q ss_pred CccccHHHHHHHHHhcCCCEEEEec------cCHHH----HHHHHH-cCCcEEEeeccCcCCCCCccchHHHHHHHHHHh
Q psy16780 48 DETINWSDVTWLKTITKLPIVLKGI------LTAED----AKIGVE-MGASAIMVSNHGGRQLDYVPASIEALPEIAKAV 116 (202)
Q Consensus 48 d~~~~~~~i~~i~~~~~~Pv~vK~~------~~~~~----a~~l~~-aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~ 116 (202)
..+-.....+.|++.++.|+++--. .+++. +.++.+ +|+++|.+ +++....+.++.+.++
T Consensus 78 Tldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVkl--------Edg~e~~~~I~al~~a- 148 (281)
T 1oy0_A 78 SIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKL--------EGGERVAEQIACLTAA- 148 (281)
T ss_dssp CGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEE--------EBSGGGHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEE--------CCcHHHHHHHHHHHHC-
Q ss_pred CCCcEEE-----------EecCCC----------CHHHHHHHHHhCCCEEEE
Q psy16780 117 GHKVDVY-----------LDGGVR----------YGTDVFKALALGAKMVFV 147 (202)
Q Consensus 117 ~~~ipii-----------a~GGI~----------~~~D~~kal~~GAd~V~i 147 (202)
.+||+ ..||.+ --+|+....++||+++.+
T Consensus 149 --gIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivl 198 (281)
T 1oy0_A 149 --GIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVM 198 (281)
T ss_dssp --TCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred --CCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEE
No 496
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=81.20 E-value=5.6 Score=33.18 Aligned_cols=75 Identities=7% Similarity=-0.030 Sum_probs=50.0
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC-CH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR-YG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~-~~ 131 (202)
++.++++++..++|++- .+.+++.+..+.+ .+|.+.+....- .+.+.+++++ .. ..||+.+-|.. +.
T Consensus 78 l~~l~~~~~~~Glp~~t-e~~d~~~~~~l~~-~vd~~kIgA~~~-------~n~~Ll~~~a-~~--~kPV~lk~G~~~t~ 145 (292)
T 1o60_A 78 LKIFQELKDTFGVKIIT-DVHEIYQCQPVAD-VVDIIQLPAFLA-------RQTDLVEAMA-KT--GAVINVKKPQFLSP 145 (292)
T ss_dssp HHHHHHHHHHHCCEEEE-ECCSGGGHHHHHT-TCSEEEECGGGT-------TCHHHHHHHH-HT--TCEEEEECCTTSCG
T ss_pred HHHHHHHHHHcCCcEEE-ecCCHHHHHHHHh-cCCEEEECcccc-------cCHHHHHHHH-cC--CCcEEEeCCCCCCH
Confidence 44666777778999885 6788888888888 799999965321 2334555554 23 67777777765 66
Q ss_pred HHHHHHHH
Q psy16780 132 TDVFKALA 139 (202)
Q Consensus 132 ~D~~kal~ 139 (202)
+++..+.+
T Consensus 146 ~ei~~Av~ 153 (292)
T 1o60_A 146 SQMGNIVE 153 (292)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 497
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=81.12 E-value=6.1 Score=32.72 Aligned_cols=75 Identities=8% Similarity=0.042 Sum_probs=51.6
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcCCcEEEeeccCcCCCCCccchHHHHHHHHHHhCCCcEEEEecCCC-CH
Q psy16780 53 WSDVTWLKTITKLPIVLKGILTAEDAKIGVEMGASAIMVSNHGGRQLDYVPASIEALPEIAKAVGHKVDVYLDGGVR-YG 131 (202)
Q Consensus 53 ~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipiia~GGI~-~~ 131 (202)
++.++++++..++|++- .+.++..+..+.+. +|.+.+....- .+.+.++++. .. ..||+.+-|.. +.
T Consensus 75 l~~l~~~~~~~Gl~~~t-e~~d~~~~~~l~~~-~d~~kIga~~~-------~n~~ll~~~a-~~--~kPV~lk~G~~~t~ 142 (280)
T 2qkf_A 75 LKIFEKVKAEFGIPVIT-DVHEPHQCQPVAEV-CDVIQLPAFLA-------RQTDLVVAMA-KT--GNVVNIKKPQFLSP 142 (280)
T ss_dssp HHHHHHHHHHHCCCEEE-ECCSGGGHHHHHHH-CSEEEECGGGT-------TBHHHHHHHH-HT--CCEEEEECCTTSCG
T ss_pred HHHHHHHHHHcCCcEEE-ecCCHHHHHHHHhh-CCEEEECcccc-------cCHHHHHHHH-cC--CCcEEEECCCCCCH
Confidence 44666777778999885 67888888888888 99999966432 2344555553 23 67777777775 66
Q ss_pred HHHHHHHH
Q psy16780 132 TDVFKALA 139 (202)
Q Consensus 132 ~D~~kal~ 139 (202)
+++..+.+
T Consensus 143 ~e~~~A~~ 150 (280)
T 2qkf_A 143 SQMKNIVE 150 (280)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 498
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=80.77 E-value=5.2 Score=33.87 Aligned_cols=69 Identities=16% Similarity=-0.005 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCcEEEeeccCcCCCCCccchHHH-------HHHHHHHhCCCcEEEEecCCCCHHHHHHHHHhCCCEEEEc
Q psy16780 76 EDAKIGVEMGASAIMVSNHGGRQLDYVPASIEA-------LPEIAKAVGHKVDVYLDGGVRYGTDVFKALALGAKMVFVG 148 (202)
Q Consensus 76 ~~a~~l~~aG~d~I~v~~~gg~~~~~~~~~~~~-------l~~i~~~~~~~ipiia~GGI~~~~D~~kal~~GAd~V~ig 148 (202)
+.++...+.|||.|+|++-..+.. ...+.-+. +..+++.+ .++||-.+. .+++-+.+++.+||+.|-=-
T Consensus 69 ~~A~~~v~~GAdIIDIGgeSTrPG-~~v~~~eEl~Rv~pvI~~l~~~~-~~vpISIDT--~~~~VaeaAl~aGa~iINDV 144 (318)
T 2vp8_A 69 DAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAY-PDQLISVDT--WRAQVAKAACAAGADLINDT 144 (318)
T ss_dssp HHHHHHHHTTCSEEEEC-----------CHHHHHHHHHHHHHHHHHHS-TTCEEEEEC--SCHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHCCCCEEEECCCcCCCC-CCCCHHHHHHHHHHHHHHHHhhC-CCCeEEEeC--CCHHHHHHHHHhCCCEEEEC
Confidence 346778999999999976321111 11111111 22233222 268887766 68888889999999977543
No 499
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=80.16 E-value=2.5 Score=36.23 Aligned_cols=42 Identities=19% Similarity=0.052 Sum_probs=36.6
Q ss_pred ccHHHHHHHHHhcCCCEEEEeccCHHHHHHHHHcC-CcEEEee
Q psy16780 51 INWSDVTWLKTITKLPIVLKGILTAEDAKIGVEMG-ASAIMVS 92 (202)
Q Consensus 51 ~~~~~i~~i~~~~~~Pv~vK~~~~~~~a~~l~~aG-~d~I~v~ 92 (202)
..++.++++++.+++||+.-+..++++++.+++.| +|.|-++
T Consensus 281 ~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 281 YSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred ccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEEC
Confidence 35778999999999999987767999999999998 9999873
No 500
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=80.11 E-value=1.2 Score=39.13 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=35.6
Q ss_pred cHHHHHHHHHhc--CCCEEEE-eccCHHHHHHHHHcCCcEEEeec
Q psy16780 52 NWSDVTWLKTIT--KLPIVLK-GILTAEDAKIGVEMGASAIMVSN 93 (202)
Q Consensus 52 ~~~~i~~i~~~~--~~Pv~vK-~~~~~~~a~~l~~aG~d~I~v~~ 93 (202)
.++.|+++++.+ ++||+.= ++.+.+++..++.+|||+|.+..
T Consensus 331 al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgr 375 (415)
T 3i65_A 331 STKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYS 375 (415)
T ss_dssp HHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESH
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 468999999988 7998843 45899999999999999999853
Done!