Your job contains 1 sequence.
>psy16786
TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG
NPKLKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKL
EESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAFFQP
CDGELVILLHFHLKNAIMFGKKKHVDVQFYT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16786
(211 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9W603 - symbol:supt16h "FACT complex subunit S... 605 2.2e-61 2
FB|FBgn0002183 - symbol:dre4 "dre4" species:7227 "Drosoph... 623 5.1e-60 1
ZFIN|ZDB-GENE-031118-96 - symbol:supt16h "suppressor of T... 599 2.0e-57 1
UNIPROTKB|E1BNP8 - symbol:SUPT16H "Uncharacterized protei... 595 4.7e-57 1
UNIPROTKB|E2REU7 - symbol:SUPT16H "Uncharacterized protei... 595 4.7e-57 1
RGD|1310032 - symbol:Supt16h "suppressor of Ty 16 homolog... 595 4.7e-57 1
UNIPROTKB|F1S8K5 - symbol:SUPT16H "Uncharacterized protei... 595 4.7e-57 1
MGI|MGI:1890948 - symbol:Supt16 "suppressor of Ty 16" spe... 594 6.1e-57 1
UNIPROTKB|Q9Y5B9 - symbol:SUPT16H "FACT complex subunit S... 592 1.0e-56 1
WB|WBGene00018849 - symbol:F55A3.3 species:6239 "Caenorha... 554 1.2e-52 1
WB|WBGene00018852 - symbol:F55A3.7 species:6239 "Caenorha... 344 2.6e-31 1
POMBASE|SPBP8B7.19 - symbol:spt16 "FACT complex subunit S... 324 5.9e-28 1
ASPGD|ASPL0000031805 - symbol:AN5102 species:162425 "Emer... 319 2.0e-27 1
DICTYBASE|DDB_G0282677 - symbol:spt16 "FACT complex subun... 290 4.2e-27 2
TAIR|locus:2139217 - symbol:GTC2 species:3702 "Arabidopsi... 299 1.5e-26 1
TAIR|locus:2132756 - symbol:SPT16 "global transcription f... 304 8.9e-26 1
SGD|S000003175 - symbol:SPT16 "Subunit of the heterodimer... 286 7.7e-25 2
CGD|CAL0005222 - symbol:CDC68 species:5476 "Candida albic... 276 8.6e-23 1
UNIPROTKB|Q5A1D5 - symbol:SPT16 "FACT complex subunit SPT... 276 8.6e-23 1
UNIPROTKB|E1BDE7 - symbol:SAFB2 "Uncharacterized protein"... 116 0.00048 1
DICTYBASE|DDB_G0293138 - symbol:DDB_G0293138 "Protein SRC... 114 0.00081 1
DICTYBASE|DDB_G0274493 - symbol:lig1 "DNA ligase I" speci... 115 0.00082 1
UNIPROTKB|B1WB17 - symbol:wibg "Partner of Y14 and mago" ... 104 0.00087 1
>UNIPROTKB|Q9W603 [details] [associations]
symbol:supt16h "FACT complex subunit SPT16" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
CTD:11198 HOVERGEN:HBG092544 InterPro:IPR013953 Pfam:PF08644
EMBL:AB004794 EMBL:BC072746 RefSeq:NP_001084166.1 UniGene:Xl.7983
ProteinModelPortal:Q9W603 PRIDE:Q9W603 GeneID:399345
KEGG:xla:399345 Xenbase:XB-GENE-979310 Uniprot:Q9W603
Length = 1035
Score = 605 (218.0 bits), Expect = 2.2e-61, Sum P(2) = 2.2e-61
Identities = 111/154 (72%), Positives = 132/154 (85%)
Query: 61 NPK---LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQ 117
NP+ +K++TYR+SN + PG PS PS NL FR+IKEVQK++++REAEEKEKE +VKQ
Sbjct: 591 NPEATFVKEITYRASNVKTPGDPSVPSLNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQ 650
Query: 118 DKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAF 177
D L + ++ NPKLKDLY+RPNI KRM GSLEAHVNGFR+TSVRGDKVDILYNNIKHA
Sbjct: 651 DSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHAL 710
Query: 178 FQPCDGELVILLHFHLKNAIMFGKKKHVDVQFYT 211
FQPCDGE++I+LHFHLKNAIMFGKK+H DVQFYT
Sbjct: 711 FQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYT 744
Score = 225 (84.3 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 43/70 (61%), Positives = 54/70 (77%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYR+SN + PG PS PS NL FR+IKEVQK++++REAEEKEKE +VKQD L + ++
Sbjct: 601 TYRASNVKTPGDPSVPSLNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS 660
Query: 61 NPKLKDLTYR 70
NPKLKDL R
Sbjct: 661 NPKLKDLYIR 670
Score = 56 (24.8 bits), Expect = 2.2e-61, Sum P(2) = 2.2e-61
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 17 STNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLTYRSSNQ 74
+T L V + +K V F +E EE+E+E+ +D+ E+ +G+ LT R+ N+
Sbjct: 416 ATVLTNVKKKVKNVGI-FLKKEDEEEEEEE---KDEAEDLLGRGSRAAALLTERTRNE 469
Score = 46 (21.3 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 105 EAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKR 144
EA + ++E L ++ +EE +S GN K K PN KR
Sbjct: 997 EARKADRESLYEE--VEEQKS-GNRKRKGHAPLPNPSKKR 1033
Score = 41 (19.5 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 96 EVQKKFRSREAEEKEKEDLVKQDKLEESRSKGN 128
E + S E+ + E+E D+LEE K +
Sbjct: 970 ETEDSVDSEESADSEEESGKDWDELEEEARKAD 1002
Score = 37 (18.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 101 FRSREAEEKEKEDLVKQ--DKLEES 123
F E EE+E+ED + D+ E+S
Sbjct: 950 FNPSEDEEEEEEDSDEDYSDETEDS 974
>FB|FBgn0002183 [details] [associations]
symbol:dre4 "dre4" species:7227 "Drosophila melanogaster"
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0001672 "regulation of
chromatin assembly or disassembly" evidence=IMP] [GO:0035101 "FACT
complex" evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005694 EMBL:AE014296
GO:GO:0022008 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0003682 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0032968
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OMA:GARYKNY EMBL:AF023269
EMBL:AF023270 EMBL:BT010116 EMBL:AB083008 PIR:T13928 PIR:T13929
RefSeq:NP_476610.2 RefSeq:NP_728686.2 UniGene:Dm.5723
ProteinModelPortal:Q8IRG6 SMR:Q8IRG6 STRING:Q8IRG6 PaxDb:Q8IRG6
EnsemblMetazoa:FBtr0072865 GeneID:38248 KEGG:dme:Dmel_CG1828
CTD:38248 FlyBase:FBgn0002183 InParanoid:Q8IRG6 OrthoDB:EOG40CFXV
GenomeRNAi:38248 NextBio:807718 Bgee:Q8IRG6 GermOnline:CG1828
Uniprot:Q8IRG6
Length = 1083
Score = 623 (224.4 bits), Expect = 5.1e-60, P = 5.1e-60
Identities = 118/148 (79%), Positives = 132/148 (89%)
Query: 64 LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEES 123
+K++TYRSSN +E G+ PS NLN FRLIKEVQK+F++REAEE+EKEDLVKQD L S
Sbjct: 601 VKEVTYRSSNVKEHGEVGAPSANLNNAFRLIKEVQKRFKTREAEEREKEDLVKQDTLILS 660
Query: 124 RSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAFFQPCDG 183
++KGNPKLKDLY+RPNIV KRMTGSLEAH NGFRY SVRGDKVDILYNNIK AFFQPCDG
Sbjct: 661 QNKGNPKLKDLYIRPNIVTKRMTGSLEAHSNGFRYISVRGDKVDILYNNIKSAFFQPCDG 720
Query: 184 ELVILLHFHLKNAIMFGKKKHVDVQFYT 211
E++ILLHFHLK AIMFGKKKHVDVQFYT
Sbjct: 721 EMIILLHFHLKYAIMFGKKKHVDVQFYT 748
Score = 245 (91.3 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 49/70 (70%), Positives = 57/70 (81%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYRSSN +E G+ PS NLN FRLIKEVQK+F++REAEE+EKEDLVKQD L S++KG
Sbjct: 605 TYRSSNVKEHGEVGAPSANLNNAFRLIKEVQKRFKTREAEEREKEDLVKQDTLILSQNKG 664
Query: 61 NPKLKDLTYR 70
NPKLKDL R
Sbjct: 665 NPKLKDLYIR 674
>ZFIN|ZDB-GENE-031118-96 [details] [associations]
symbol:supt16h "suppressor of Ty 16 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0009987 "cellular
process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000994 Pfam:PF00557 ZFIN:ZDB-GENE-031118-96
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:BX248243 EMBL:CABZ01078837
IPI:IPI00997833 Ensembl:ENSDART00000126840 ArrayExpress:E7F5E9
Bgee:E7F5E9 Uniprot:E7F5E9
Length = 1077
Score = 599 (215.9 bits), Expect = 2.0e-57, P = 2.0e-57
Identities = 110/154 (71%), Positives = 131/154 (85%)
Query: 61 NPK---LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQ 117
NP+ +K++TYR+SN + PG S PSTNL FR+IKEVQK++++REAEEKEKE +VKQ
Sbjct: 634 NPEATFVKEITYRASNLKSPGDHSVPSTNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQ 693
Query: 118 DKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAF 177
D L + ++ NPKLKDLY+RPNI KRM GSLEAH NGFR+TSVRGDKVDILYNNIKHA
Sbjct: 694 DSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHTNGFRFTSVRGDKVDILYNNIKHAI 753
Query: 178 FQPCDGELVILLHFHLKNAIMFGKKKHVDVQFYT 211
FQPCDGE++I+LHFHLKNAIMFGKK+H DVQFYT
Sbjct: 754 FQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYT 787
Score = 224 (83.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 47/87 (54%), Positives = 62/87 (71%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYR+SN + PG S PSTNL FR+IKEVQK++++REAEEKEKE +VKQD L + ++
Sbjct: 644 TYRASNLKSPGDHSVPSTNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS 703
Query: 61 NPKLKDLTYRSSNQREPGQPSTPS-TN 86
NPKLKDL R + ++ Q S + TN
Sbjct: 704 NPKLKDLYIRPNIAQKRMQGSLEAHTN 730
>UNIPROTKB|E1BNP8 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:DAAA02028315 IPI:IPI00696830 RefSeq:NP_001179321.1
UniGene:Bt.2157 PRIDE:E1BNP8 Ensembl:ENSBTAT00000027214
GeneID:514989 KEGG:bta:514989 NextBio:20871607 Uniprot:E1BNP8
Length = 1047
Score = 595 (214.5 bits), Expect = 4.7e-57, P = 4.7e-57
Identities = 108/154 (70%), Positives = 132/154 (85%)
Query: 61 NPK---LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQ 117
NP+ +K++TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQ
Sbjct: 589 NPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQ 648
Query: 118 DKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAF 177
D L + ++ NPKLKDLY+RPNI KRM GSLEAHVNGFR+TSVRGDKVDILYNNIKHA
Sbjct: 649 DSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHAL 708
Query: 178 FQPCDGELVILLHFHLKNAIMFGKKKHVDVQFYT 211
FQPCDGE++I+LHFHLKNAIMFGKK+H DVQFYT
Sbjct: 709 FQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYT 742
Score = 215 (80.7 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQD L + ++
Sbjct: 599 TYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS 658
Query: 61 NPKLKDLTYR 70
NPKLKDL R
Sbjct: 659 NPKLKDLYIR 668
Score = 41 (19.5 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 96 EVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNG 155
E ++ S+E+ E+E D+LEE K + + + Y + M+ +A V+
Sbjct: 969 EAEESDYSKESLGSEEESGKDWDELEEEARKADRESR--YEEEEEQSRSMSRKRKASVHS 1026
Query: 156 FRYTSVRGDK 165
S RG +
Sbjct: 1027 SGRGSNRGSR 1036
>UNIPROTKB|E2REU7 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512
CTD:11198 OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:AAEX03009852 RefSeq:XP_851566.1
Ensembl:ENSCAFT00000009018 GeneID:612874 KEGG:cfa:612874
NextBio:20898360 Uniprot:E2REU7
Length = 1047
Score = 595 (214.5 bits), Expect = 4.7e-57, P = 4.7e-57
Identities = 108/154 (70%), Positives = 132/154 (85%)
Query: 61 NPK---LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQ 117
NP+ +K++TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQ
Sbjct: 589 NPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQ 648
Query: 118 DKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAF 177
D L + ++ NPKLKDLY+RPNI KRM GSLEAHVNGFR+TSVRGDKVDILYNNIKHA
Sbjct: 649 DSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHAL 708
Query: 178 FQPCDGELVILLHFHLKNAIMFGKKKHVDVQFYT 211
FQPCDGE++I+LHFHLKNAIMFGKK+H DVQFYT
Sbjct: 709 FQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYT 742
Score = 215 (80.7 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQD L + ++
Sbjct: 599 TYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS 658
Query: 61 NPKLKDLTYR 70
NPKLKDL R
Sbjct: 659 NPKLKDLYIR 668
Score = 41 (19.5 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 96 EVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNG 155
E ++ S+E+ E+E D+LEE K + + + Y + M+ +A V+
Sbjct: 969 EAEESDYSKESLGSEEESGKDWDELEEEARKADRESR--YEEEEEQSRSMSRKRKASVHS 1026
Query: 156 FRYTSVRGDK 165
S RG +
Sbjct: 1027 SGRGSNRGSR 1036
>RGD|1310032 [details] [associations]
symbol:Supt16h "suppressor of Ty 16 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 RGD:1310032
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 EMBL:CH474040
InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
OrthoDB:EOG40K7Z3 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 IPI:IPI00869870 RefSeq:NP_001100731.1
UniGene:Rn.93187 Ensembl:ENSRNOT00000016288 GeneID:305851
KEGG:rno:305851 UCSC:RGD:1310032 NextBio:655127 Uniprot:D4A4J0
Length = 1047
Score = 595 (214.5 bits), Expect = 4.7e-57, P = 4.7e-57
Identities = 108/154 (70%), Positives = 132/154 (85%)
Query: 61 NPK---LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQ 117
NP+ +K++TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQ
Sbjct: 589 NPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQ 648
Query: 118 DKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAF 177
D L + ++ NPKLKDLY+RPNI KRM GSLEAHVNGFR+TSVRGDKVDILYNNIKHA
Sbjct: 649 DSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHAL 708
Query: 178 FQPCDGELVILLHFHLKNAIMFGKKKHVDVQFYT 211
FQPCDGE++I+LHFHLKNAIMFGKK+H DVQFYT
Sbjct: 709 FQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYT 742
Score = 215 (80.7 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQD L + ++
Sbjct: 599 TYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS 658
Query: 61 NPKLKDLTYR 70
NPKLKDL R
Sbjct: 659 NPKLKDLYIR 668
Score = 41 (19.5 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 96 EVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNG 155
E ++ S+E+ E+E D+LEE K + + + Y + M+ +A V+
Sbjct: 969 EAEESDYSKESLGSEEESGKDWDELEEEARKADRESR--YEEEEEQSRSMSRKRKASVHS 1026
Query: 156 FRYTSVRGDK 165
S RG +
Sbjct: 1027 SGRGSNRGSR 1036
>UNIPROTKB|F1S8K5 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:CT797461 Ensembl:ENSSSCT00000031400 Uniprot:F1S8K5
Length = 1048
Score = 595 (214.5 bits), Expect = 4.7e-57, P = 4.7e-57
Identities = 108/154 (70%), Positives = 132/154 (85%)
Query: 61 NPK---LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQ 117
NP+ +K++TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQ
Sbjct: 589 NPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQ 648
Query: 118 DKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAF 177
D L + ++ NPKLKDLY+RPNI KRM GSLEAHVNGFR+TSVRGDKVDILYNNIKHA
Sbjct: 649 DSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHAL 708
Query: 178 FQPCDGELVILLHFHLKNAIMFGKKKHVDVQFYT 211
FQPCDGE++I+LHFHLKNAIMFGKK+H DVQFYT
Sbjct: 709 FQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYT 742
Score = 215 (80.7 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQD L + ++
Sbjct: 599 TYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS 658
Query: 61 NPKLKDLTYR 70
NPKLKDL R
Sbjct: 659 NPKLKDLYIR 668
Score = 41 (19.5 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 96 EVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNG 155
E ++ S+E+ E+E D+LEE K + + + Y + M+ +A V+
Sbjct: 970 EAEESDYSKESLGSEEESGKDWDELEEEARKADRESR--YEEEEEQSRSMSRKRKASVHS 1027
Query: 156 FRYTSVRGDK 165
S RG +
Sbjct: 1028 SGRGSNRGSR 1037
>MGI|MGI:1890948 [details] [associations]
symbol:Supt16 "suppressor of Ty 16" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0009987 "cellular process" evidence=IEA] InterPro:IPR000994
Pfam:PF00557 MGI:MGI:1890948 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
UniGene:Mm.21662 MEROPS:M24.974 eggNOG:COG5406 HOGENOM:HOG000209079
HOVERGEN:HBG092544 OrthoDB:EOG40K7Z3 InterPro:IPR013953
Pfam:PF08644 EMBL:AF323667 EMBL:AK148506 EMBL:AK158116
EMBL:BC012433 IPI:IPI00120344 RefSeq:NP_291096.2 UniGene:Mm.489682
ProteinModelPortal:Q920B9 SMR:Q920B9 DIP:DIP-55972N IntAct:Q920B9
STRING:Q920B9 PhosphoSite:Q920B9 PaxDb:Q920B9 PRIDE:Q920B9
GeneID:114741 KEGG:mmu:114741 UCSC:uc007tor.1 CTD:114741
InParanoid:Q920B9 NextBio:368789 CleanEx:MM_SUPT16H
Genevestigator:Q920B9 GermOnline:ENSMUSG00000035726 Uniprot:Q920B9
Length = 1047
Score = 594 (214.2 bits), Expect = 6.1e-57, P = 6.1e-57
Identities = 107/154 (69%), Positives = 132/154 (85%)
Query: 61 NPK---LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQ 117
NP+ +K++TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQ
Sbjct: 589 NPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQ 648
Query: 118 DKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAF 177
D L + ++ NPKLKDLY+RPNI KRM GSLEAHVNGFR+TSVRGDKVDILYNNIKHA
Sbjct: 649 DSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHAL 708
Query: 178 FQPCDGELVILLHFHLKNAIMFGKKKHVDVQFYT 211
FQPCDGE++I+LHFHLKNA+MFGKK+H DVQFYT
Sbjct: 709 FQPCDGEMIIVLHFHLKNAVMFGKKRHTDVQFYT 742
Score = 215 (80.7 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQD L + ++
Sbjct: 599 TYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS 658
Query: 61 NPKLKDLTYR 70
NPKLKDL R
Sbjct: 659 NPKLKDLYIR 668
Score = 41 (19.5 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 96 EVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNG 155
E ++ S+E+ E+E D+LEE K + + + Y + M+ +A V+
Sbjct: 969 EAEESDYSKESLGSEEESGKDWDELEEEARKADRESR--YEEEEEQSRSMSRKRKASVHS 1026
Query: 156 FRYTSVRGDK 165
S RG +
Sbjct: 1027 SGRGSNRGSR 1036
>UNIPROTKB|Q9Y5B9 [details] [associations]
symbol:SUPT16H "FACT complex subunit SPT16" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=TAS]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0050434 "positive regulation of viral transcription"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000994 Pfam:PF00557
Reactome:REACT_116125 GO:GO:0005694 GO:GO:0005654 GO:GO:0016032
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006337 Reactome:REACT_1788 GO:GO:0050434
Reactome:REACT_1892 GO:GO:0032786 InterPro:IPR013719 Pfam:PF08512
EMBL:AF152961 EMBL:BC000565 EMBL:BC014046 EMBL:BC064561
EMBL:BC073849 EMBL:AF164924 IPI:IPI00026970 RefSeq:NP_009123.1
UniGene:Hs.213724 ProteinModelPortal:Q9Y5B9 SMR:Q9Y5B9
DIP:DIP-42757N IntAct:Q9Y5B9 MINT:MINT-2823866 STRING:Q9Y5B9
MEROPS:M24.974 PhosphoSite:Q9Y5B9 DMDM:74753511 PaxDb:Q9Y5B9
PeptideAtlas:Q9Y5B9 PRIDE:Q9Y5B9 Ensembl:ENST00000216297
GeneID:11198 KEGG:hsa:11198 UCSC:uc001wao.2 CTD:11198
GeneCards:GC14M021819 HGNC:HGNC:11465 HPA:CAB022551 MIM:605012
neXtProt:NX_Q9Y5B9 PharmGKB:PA36251 eggNOG:COG5406
HOGENOM:HOG000209079 HOVERGEN:HBG092544 InParanoid:Q9Y5B9
OMA:MEIIDAD OrthoDB:EOG40K7Z3 PhylomeDB:Q9Y5B9 ChiTaRS:SUPT16H
GenomeRNAi:11198 NextBio:42621 ArrayExpress:Q9Y5B9 Bgee:Q9Y5B9
CleanEx:HS_SUPT16H Genevestigator:Q9Y5B9 GermOnline:ENSG00000092201
InterPro:IPR013953 Pfam:PF08644 Uniprot:Q9Y5B9
Length = 1047
Score = 592 (213.5 bits), Expect = 1.0e-56, P = 1.0e-56
Identities = 108/154 (70%), Positives = 132/154 (85%)
Query: 61 NPK---LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQ 117
NP+ +K++TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQ
Sbjct: 589 NPEATFVKEITYRASNIKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQ 648
Query: 118 DKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAF 177
D L + ++ NPKLKDLY+RPNI KRM GSLEAHVNGFR+TSVRGDKVDILYNNIKHA
Sbjct: 649 DSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHAL 708
Query: 178 FQPCDGELVILLHFHLKNAIMFGKKKHVDVQFYT 211
FQPCDGE++I+LHFHLKNAIMFGKK+H DVQFYT
Sbjct: 709 FQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYT 742
Score = 212 (79.7 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 40/70 (57%), Positives = 54/70 (77%)
Query: 1 TYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKG 60
TYR+SN + PG+ + P+ NL FR+IKEVQK++++REAEEKEKE +VKQD L + ++
Sbjct: 599 TYRASNIKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRS 658
Query: 61 NPKLKDLTYR 70
NPKLKDL R
Sbjct: 659 NPKLKDLYIR 668
Score = 41 (19.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 96 EVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNG 155
E ++ S+E+ E+E D+LEE K + + + Y + M+ +A V+
Sbjct: 969 EAEESDYSKESLGSEEESGKDWDELEEEARKADRESR--YEEEEEQSRSMSRKRKASVHS 1026
Query: 156 FRYTSVRGDK 165
S RG +
Sbjct: 1027 SGRGSNRGSR 1036
>WB|WBGene00018849 [details] [associations]
symbol:F55A3.3 species:6239 "Caenorhabditis elegans"
[GO:0009987 "cellular process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005694 GO:GO:0006355 GO:GO:0006260
GO:GO:0018996 GO:GO:0006281 GO:GO:0006351 GO:GO:0000910
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
RefSeq:NP_492821.1 ProteinModelPortal:Q9N5R9 SMR:Q9N5R9
STRING:Q9N5R9 PaxDb:Q9N5R9 EnsemblMetazoa:F55A3.3.1
EnsemblMetazoa:F55A3.3.2 GeneID:172984 KEGG:cel:CELE_F55A3.3
UCSC:F55A3.3 CTD:172984 WormBase:F55A3.3
GeneTree:ENSGT00390000014495 InParanoid:Q9N5R9 OMA:GARYKNY
NextBio:877797 Uniprot:Q9N5R9
Length = 1030
Score = 554 (200.1 bits), Expect = 1.2e-52, P = 1.2e-52
Identities = 102/149 (68%), Positives = 129/149 (86%)
Query: 64 LKDLTYRSSNQREPGQPST-PSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEE 122
+K+LT+R+SN ++ ST PS NL+T FRLIKE+QK+F++ EAEE+EKE VKQDKL
Sbjct: 594 MKELTFRASNIKDHHSDSTAPSHNLSTAFRLIKEMQKRFKTEEAEEREKEGAVKQDKLIL 653
Query: 123 SRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAFFQPCD 182
S++K NPKLKDL +RPNI+ KR+TGSLEAH NGFRYTS+RGD++D+LYNNIKHAFFQPCD
Sbjct: 654 SQNKLNPKLKDLLIRPNIIQKRITGSLEAHTNGFRYTSLRGDRIDVLYNNIKHAFFQPCD 713
Query: 183 GELVILLHFHLKNAIMFGKKKHVDVQFYT 211
E++ILLHFHLKN +++GKKK+ DVQFYT
Sbjct: 714 NEMIILLHFHLKNPVLWGKKKYKDVQFYT 742
Score = 200 (75.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 43/71 (60%), Positives = 55/71 (77%)
Query: 1 TYRSSNQREPGQPST-PSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSK 59
T+R+SN ++ ST PS NL+T FRLIKE+QK+F++ EAEE+EKE VKQDKL S++K
Sbjct: 598 TFRASNIKDHHSDSTAPSHNLSTAFRLIKEMQKRFKTEEAEEREKEGAVKQDKLILSQNK 657
Query: 60 GNPKLKDLTYR 70
NPKLKDL R
Sbjct: 658 LNPKLKDLLIR 668
>WB|WBGene00018852 [details] [associations]
symbol:F55A3.7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR000994 GO:GO:0009792 GO:GO:0018996
GO:GO:0000910 Gene3D:3.90.230.10 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 RefSeq:NP_492820.3
ProteinModelPortal:Q9N5S0 SMR:Q9N5S0 STRING:Q9N5S0 PaxDb:Q9N5S0
EnsemblMetazoa:F55A3.7 GeneID:186272 KEGG:cel:CELE_F55A3.7
UCSC:F55A3.7 CTD:186272 WormBase:F55A3.7 InParanoid:Q9N5S0
NextBio:931258 Uniprot:Q9N5S0
Length = 450
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 68/112 (60%), Positives = 90/112 (80%)
Query: 64 LKDLTYRSSNQREPGQPST-PSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEE 122
+K+ T+R+SN ++ ST PS NL+T FR IKE+QK+F+S EAE++EKE VKQDKL
Sbjct: 329 MKEFTFRASNIKDHHSDSTAPSRNLSTAFRFIKEMQKRFKSEEAEQREKEGAVKQDKLIL 388
Query: 123 SRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIK 174
S++K NPKL +L + PNI+ K +TGSLEAH NGFRYTS+RGD++D+LYNNIK
Sbjct: 389 SQNKLNPKL-NLLICPNIIQKLITGSLEAHTNGFRYTSLRGDRIDVLYNNIK 439
Score = 179 (68.1 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 1 TYRSSNQREPGQPST-PSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSK 59
T+R+SN ++ ST PS NL+T FR IKE+QK+F+S EAE++EKE VKQDKL S++K
Sbjct: 333 TFRASNIKDHHSDSTAPSRNLSTAFRFIKEMQKRFKSEEAEQREKEGAVKQDKLILSQNK 392
Query: 60 GNPKL 64
NPKL
Sbjct: 393 LNPKL 397
>POMBASE|SPBP8B7.19 [details] [associations]
symbol:spt16 "FACT complex subunit Spt16" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0035101 "FACT
complex" evidence=IDA] [GO:0043486 "histone exchange" evidence=IC]
[GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 PomBase:SPBP8B7.19 GO:GO:0006355
GO:GO:0044732 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006261 GO:GO:0000790 GO:GO:0006368 GO:GO:0043486
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0035101
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644 OrthoDB:EOG4QC4DF
PIR:T40813 RefSeq:NP_596526.1 PDB:3CB5 PDB:3CB6 PDBsum:3CB5
PDBsum:3CB6 ProteinModelPortal:O94267 SMR:O94267 DIP:DIP-44081N
STRING:O94267 EnsemblFungi:SPBP8B7.19.1 GeneID:2541355
KEGG:spo:SPBP8B7.19 EvolutionaryTrace:O94267 NextBio:20802464
Uniprot:O94267
Length = 1019
Score = 324 (119.1 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 66/149 (44%), Positives = 99/149 (66%)
Query: 64 LKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEES 123
++ T+RSSN ++ ++ VF+ I++++K RE E KE D+++QDKL E
Sbjct: 606 IRSFTFRSSN----------NSRMSQVFKDIQDMKKAATKRETERKEFADVIEQDKLIEI 655
Query: 124 RSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTS-VRGDK-VDILYNNIKHAFFQPC 181
++K + D+Y+RP I KR+ G +E H NG RY S +R D +D+L++N+KH FFQPC
Sbjct: 656 KNKRPAHINDVYVRPAIDGKRLPGFIEIHQNGIRYQSPLRSDSHIDLLFSNMKHLFFQPC 715
Query: 182 DGELVILLHFHLKNAIMFGKKKHVDVQFY 210
+GEL++L+H HLK IM GK+K DVQFY
Sbjct: 716 EGELIVLIHVHLKAPIMVGKRKTQDVQFY 744
>ASPGD|ASPL0000031805 [details] [associations]
symbol:AN5102 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009987 "cellular
process" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
EMBL:BN001305 Gene3D:3.90.230.10 SUPFAM:SSF55920 EMBL:AACD01000088
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
InterPro:IPR013953 Pfam:PF08644 RefSeq:XP_662706.1 STRING:Q5B2X8
GeneID:2871397 KEGG:ani:AN5102.2 OMA:FENIKHV OrthoDB:EOG4QC4DF
Uniprot:Q5B2X8
Length = 1019
Score = 319 (117.4 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 61/118 (51%), Positives = 83/118 (70%)
Query: 94 IKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHV 153
I E++K RE E+KE ED+V+QDKL E R++ KL D+Y+RP + KR+ G +E H
Sbjct: 628 ITELRKNALRREQEKKEMEDVVEQDKLVEIRNRRPVKLPDVYLRPPLDGKRVPGEVEIHQ 687
Query: 154 NGFRYTS-VRGDKVDILYNNIKHAFFQPCDGELVILLHFHLKNAIMFGKKKHVDVQFY 210
NG RY S R + VD+L++N+KH FFQPC EL++L+H HLK IM GK+K D+QFY
Sbjct: 688 NGLRYVSPFRNEHVDVLFSNVKHLFFQPCAHELIVLIHVHLKTPIMIGKRKTRDIQFY 745
>DICTYBASE|DDB_G0282677 [details] [associations]
symbol:spt16 "FACT complex subunit SPT16"
species:44689 "Dictyostelium discoideum" [GO:0009987 "cellular
process" evidence=IEA] [GO:0035101 "FACT complex" evidence=ISS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISS] [GO:0001672 "regulation of chromatin
assembly or disassembly" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557
dictyBase:DDB_G0282677 GO:GO:0005694 GO:GO:0006355
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0006260
GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 OMA:GARYKNY
RefSeq:XP_640196.1 ProteinModelPortal:Q54S43 STRING:Q54S43
EnsemblProtists:DDB0231753 GeneID:8623736 KEGG:ddi:DDB_G0282677
Uniprot:Q54S43
Length = 1072
Score = 290 (107.1 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
Identities = 63/132 (47%), Positives = 87/132 (65%)
Query: 83 PSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVM 142
P N + RLIKE++KKF +RE E++EK +L+ Q+KL R K P+L +++ RP +
Sbjct: 631 PKVLANNI-RLIKELKKKFTTRETEDREKRNLITQEKLILLRGKF-PRLPEVHARPTLSG 688
Query: 143 KRMT-GSLEAHVNGFRY--TSVRG-DKVDILYNNIKHAFFQPCDGELVILLHFHLKNAIM 198
R T G LEAH NG R+ TS + +D+LY NIKHA +Q D E + ++HFHL +A+M
Sbjct: 689 ARRTIGILEAHENGIRFNPTSTKDRTPIDVLYKNIKHAIYQQADQESMAVIHFHLHDALM 748
Query: 199 FGKKKHVDVQFY 210
GKKK DVQFY
Sbjct: 749 IGKKKTKDVQFY 760
Score = 54 (24.1 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
Identities = 14/63 (22%), Positives = 32/63 (50%)
Query: 29 EVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLTYRSSNQREPGQPSTPSTNLN 88
E ++K +S E ++ + +++Q L+E+ +K +K +T + + P T T L
Sbjct: 486 ETKEKSKSVEERRRDHQKMLEQKNLQEAENK----IKAMTDPNGKKGTPEVDYTAITKLQ 541
Query: 89 TVF 91
++
Sbjct: 542 PIY 544
Score = 49 (22.3 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 13/63 (20%), Positives = 26/63 (41%)
Query: 32 KKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLTYRSSNQREP-GQPSTPSTNLNTV 90
K R E KEK V++ + + + L++ + +P G+ TP + +
Sbjct: 478 KGITGRTIETKEKSKSVEERRRDHQKMLEQKNLQEAENKIKAMTDPNGKKGTPEVDYTAI 537
Query: 91 FRL 93
+L
Sbjct: 538 TKL 540
>TAIR|locus:2139217 [details] [associations]
symbol:GTC2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644 IPI:IPI00536333
RefSeq:NP_192805.2 UniGene:At.54263 EnsemblPlants:AT4G10670.1
GeneID:826660 KEGG:ath:AT4G10670 ArrayExpress:F4JME7 Uniprot:F4JME7
Length = 343
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 62/129 (48%), Positives = 86/129 (66%)
Query: 84 STNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNP-KLKDLYMRPNIV- 141
S + + V + +K +++K +RE+E E+ LV Q+KL+ R+ P L +L++RP
Sbjct: 72 SRHSSDVVQQVKSLRRKVMARESERAERTSLVNQEKLQIVRNNSKPLSLSNLWIRPPFSG 131
Query: 142 MKRMTGSLEAHVNGFRYTSVRGDKVDILYNNIKHAFFQPCDGELVILLHFHLKNAIMFGK 201
K+ G+LEAHVNGFRY S ++VD+L+ NIKHAFFQP + E+ LLHFHL N IM G
Sbjct: 132 RKKNRGTLEAHVNGFRY-STTNERVDVLFANIKHAFFQPAEKEMTTLLHFHLHNHIMVGT 190
Query: 202 KKHVDVQFY 210
KK DVQFY
Sbjct: 191 KKTKDVQFY 199
>TAIR|locus:2132756 [details] [associations]
symbol:SPT16 "global transcription factor C" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009987 "cellular process" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005719 "nuclear euchromatin"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0007346
"regulation of mitotic cell cycle" evidence=RCA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR000994
Pfam:PF00557 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0010228 GO:GO:0005719 Gene3D:3.90.230.10 SUPFAM:SSF55920
EMBL:AF080119 EMBL:AL161518 GO:GO:0035101 InterPro:IPR013719
Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 EMBL:AB493678 IPI:IPI00520940
PIR:T01906 RefSeq:NP_192809.1 UniGene:At.27606
ProteinModelPortal:O82491 SMR:O82491 STRING:O82491 PaxDb:O82491
PRIDE:O82491 EnsemblPlants:AT4G10710.1 GeneID:826665
KEGG:ath:AT4G10710 TAIR:At4g10710 InParanoid:O82491
PhylomeDB:O82491 ProtClustDB:CLSN2686053 Genevestigator:O82491
GermOnline:AT4G10710 Uniprot:O82491
Length = 1074
Score = 304 (112.1 bits), Expect = 8.9e-26, P = 8.9e-26
Identities = 66/157 (42%), Positives = 103/157 (65%)
Query: 57 RSKGNPKLKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVK 116
+++G LK++++R+ + R + V + IK ++++ +RE+E E+ LV
Sbjct: 615 KNQGAIYLKEVSFRTKDSRHSSE----------VTQQIKTLRRQVMARESERAERATLVT 664
Query: 117 QDKLEESRSKGNP-KLKDLYMRPNIV-MKRMTGSLEAHVNGFRYTSVRGD-KVDILYNNI 173
Q+KL+ + +K P +L +L++RP K++ G+LEAH NGFRY++ R D +VD+L+ NI
Sbjct: 665 QEKLQLAGNKFKPLRLSELWIRPPFSGRKKIPGTLEAHANGFRYSTTRPDERVDVLFANI 724
Query: 174 KHAFFQPCDGELVILLHFHLKNAIMFGKKKHVDVQFY 210
KHAFFQP + E++ LLHFHL N IM G KK DVQFY
Sbjct: 725 KHAFFQPAEKEMITLLHFHLHNHIMVGTKKTKDVQFY 761
>SGD|S000003175 [details] [associations]
symbol:SPT16 "Subunit of the heterodimeric FACT complex
(Spt16p-Pob3p), which assoc" species:4932 "Saccharomyces
cerevisiae" [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IPI]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IDA] [GO:0031298 "replication fork protection complex"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IGI;IPI]
[GO:0008023 "transcription elongation factor complex" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IPI] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IMP] [GO:0006334 "nucleosome
assembly" evidence=IDA] [GO:0009987 "cellular process"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0034724 "DNA
replication-independent nucleosome organization" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 SGD:S000003175 EMBL:BK006941
GO:GO:0006281 GO:GO:0006261 GO:GO:0000790 GO:GO:0034401
GO:GO:0006368 GO:GO:0045899 EMBL:M27174 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0031298 GO:GO:0060261
GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512 GO:GO:0034724
eggNOG:COG5406 HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OrthoDB:EOG4QC4DF EMBL:M73533
EMBL:Z72729 PIR:S18512 RefSeq:NP_011308.1 PDB:3BIP PDB:3BIQ
PDB:3BIT PDBsum:3BIP PDBsum:3BIQ PDBsum:3BIT
ProteinModelPortal:P32558 SMR:P32558 DIP:DIP-2546N IntAct:P32558
MINT:MINT-427889 STRING:P32558 PaxDb:P32558 PeptideAtlas:P32558
EnsemblFungi:YGL207W GeneID:852665 KEGG:sce:YGL207W CYGD:YGL207w
OMA:THEAVIS EvolutionaryTrace:P32558 NextBio:971957
Genevestigator:P32558 GermOnline:YGL207W Uniprot:P32558
Length = 1035
Score = 286 (105.7 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 62/154 (40%), Positives = 96/154 (62%)
Query: 63 KLKDLTYRSS--NQ--REPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQD 118
K+++L Y S NQ R S ++ F+ I +++K+ RE E K D+V+QD
Sbjct: 608 KVEELPYEESADNQFVRSITLRSKDGDRMSETFKQIADLKKEATKREQERKALADVVQQD 667
Query: 119 KLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTS-VRGD-KVDILYNNIKHA 176
KL E+++ +L +++RPN KR+ ++ H NG R+ S +R D ++DIL++NIK+
Sbjct: 668 KLIENKTGRTKRLDQIFVRPNPDTKRVPSTVFIHENGIRFQSPLRTDSRIDILFSNIKNL 727
Query: 177 FFQPCDGELVILLHFHLKNAIMFGKKKHVDVQFY 210
FQ C GEL++++H HLKN I+ GKKK DVQFY
Sbjct: 728 IFQSCKGELIVVIHIHLKNPILMGKKKIQDVQFY 761
Score = 36 (17.7 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 10 PGQPSTPSTNLNTVFRL-----IKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKGN 61
P +P S L T R ++ QK+ +E ++K E L K L S + N
Sbjct: 466 PSKPDRNSKILRTKLRGEARGGAEDAQKEQIRKENQKKLHEKLEKNGLLRFSAADAN 522
>CGD|CAL0005222 [details] [associations]
symbol:CDC68 species:5476 "Candida albicans" [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0008023 "transcription elongation factor complex"
evidence=IGI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IGI] [GO:0031298 "replication
fork protection complex" evidence=IEA] [GO:0005816 "spindle pole
body" evidence=IEA] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0034724 "DNA replication-independent nucleosome
organization" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222 GO:GO:0005694
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784 EMBL:AACQ01000084
EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047 RefSeq:XP_715540.1
RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5 STRING:Q5A1D5
GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 276 (102.2 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 63/173 (36%), Positives = 100/173 (57%)
Query: 46 DLVKQDKLEESRSKGNPKLKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSRE 105
++ K+ +L S N L+ +T RS +++ + V++ I++++K RE
Sbjct: 624 NVTKKQELPYEDSPDNSFLRSITIRSRDRQR----------MVDVYKAIQDLKKDSVKRE 673
Query: 106 AEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTS----- 160
E+K+ D++ Q L E + KL ++++RP K++ G L+ H NG RY S
Sbjct: 674 QEKKQMADVITQANLIELKGSRVKKLNNVFIRPTPDTKKIGGVLQIHENGLRYQSQPQSQ 733
Query: 161 --VRGD-KVDILYNNIKHAFFQPCDGELVILLHFHLKNAIMFGKKKHVDVQFY 210
+ D +VD+L++NIKH FFQPC EL++L+H HLKN IM GK+K DVQFY
Sbjct: 734 SNFKNDQRVDVLFSNIKHLFFQPCKDELIVLIHCHLKNPIMIGKRKTFDVQFY 786
>UNIPROTKB|Q5A1D5 [details] [associations]
symbol:SPT16 "FACT complex subunit SPT16" species:237561
"Candida albicans SC5314" [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IGI] [GO:0008023
"transcription elongation factor complex" evidence=IGI] [GO:0032784
"regulation of DNA-dependent transcription, elongation"
evidence=IGI] InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222
GO:GO:0005694 GO:GO:0006260 GO:GO:0006281 GO:GO:0006368
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784
EMBL:AACQ01000084 EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047
RefSeq:XP_715540.1 RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5
STRING:Q5A1D5 GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 276 (102.2 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 63/173 (36%), Positives = 100/173 (57%)
Query: 46 DLVKQDKLEESRSKGNPKLKDLTYRSSNQREPGQPSTPSTNLNTVFRLIKEVQKKFRSRE 105
++ K+ +L S N L+ +T RS +++ + V++ I++++K RE
Sbjct: 624 NVTKKQELPYEDSPDNSFLRSITIRSRDRQR----------MVDVYKAIQDLKKDSVKRE 673
Query: 106 AEEKEKEDLVKQDKLEESRSKGNPKLKDLYMRPNIVMKRMTGSLEAHVNGFRYTS----- 160
E+K+ D++ Q L E + KL ++++RP K++ G L+ H NG RY S
Sbjct: 674 QEKKQMADVITQANLIELKGSRVKKLNNVFIRPTPDTKKIGGVLQIHENGLRYQSQPQSQ 733
Query: 161 --VRGD-KVDILYNNIKHAFFQPCDGELVILLHFHLKNAIMFGKKKHVDVQFY 210
+ D +VD+L++NIKH FFQPC EL++L+H HLKN IM GK+K DVQFY
Sbjct: 734 SNFKNDQRVDVLFSNIKHLFFQPCKDELIVLIHCHLKNPIMIGKRKTFDVQFY 786
>UNIPROTKB|E1BDE7 [details] [associations]
symbol:SAFB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR003034 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02037
PROSITE:PS50102 PROSITE:PS50800 SMART:SM00360 SMART:SM00513
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 Gene3D:1.10.720.30
GeneTree:ENSGT00690000102108 OMA:GTEDNGL EMBL:DAAA02019580
IPI:IPI00837910 Ensembl:ENSBTAT00000044703 Uniprot:E1BDE7
Length = 954
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 32/114 (28%), Positives = 61/114 (53%)
Query: 30 VQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLTYRSSN---QREPGQPST---P 83
V+K+ + + EEKE ED+ K++K +E+ K P+ + +S + +R + P
Sbjct: 522 VKKEEKMEKKEEKEPEDIKKEEK-DENELKSGPENRSRVTKSGSRGMERTVVMDKSKGEP 580
Query: 84 STNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLYMR 137
++ T R KE K + R++E KEK D++ DK++E R + + ++ +R
Sbjct: 581 VISVKTTSRS-KERSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIR 633
>DICTYBASE|DDB_G0293138 [details] [associations]
symbol:DDB_G0293138 "Protein SRC1" species:44689
"Dictyostelium discoideum" [GO:0005639 "integral to nuclear inner
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR018996 Pfam:PF09402
dictyBase:DDB_G0293138 EMBL:AAFI02000199 GO:GO:0005639
eggNOG:NOG292066 RefSeq:XP_629358.1 ProteinModelPortal:Q54C61
EnsemblProtists:DDB0191811 GeneID:8629082 KEGG:ddi:DDB_G0293138
InParanoid:Q54C61 OMA:FEYSDSP Uniprot:Q54C61
Length = 942
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 42/149 (28%), Positives = 78/149 (52%)
Query: 17 STNLNTVFRLIKEVQKK-F-RSREAEEKEKE-DLVKQDKLEESRSKGNPKLKDLTYRSSN 73
S+++ + LIK+ ++K F S+E EEKEKE + K+ + E+ + K + T +++
Sbjct: 72 SSSILSADDLIKKNRRKSFGESKEKEEKEKEKEKEKEKEKEKEKEKSSSSTTTTTTTTTS 131
Query: 74 QREPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKD 133
+ +P T S++ ++ E K S E +EKEKE +++K +E++ K N L
Sbjct: 132 KLKPKSTLTSSSSSSSHIATYSEPLKD-HSSEPKEKEKEK--EKEKEKENKDKSNSTLTP 188
Query: 134 LYMRPNIVMKRMTGSLEAHVNGFRYTSVR 162
N+V K S+E+ N F++ +
Sbjct: 189 T----NVVKKLKRKSIESG-NIFQFDQAK 212
>DICTYBASE|DDB_G0274493 [details] [associations]
symbol:lig1 "DNA ligase I" species:44689
"Dictyostelium discoideum" [GO:0051103 "DNA ligation involved in
DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003910 "DNA ligase (ATP) activity"
evidence=IEA;IBA] [GO:0003909 "DNA ligase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IBA] [GO:0006273 "lagging
strand elongation" evidence=IBA] [GO:0006266 "DNA ligation"
evidence=IBA] [GO:0005739 "mitochondrion" evidence=IBA] [GO:0005694
"chromosome" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA;IBA]
[GO:0051301 "cell division" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000977 InterPro:IPR012308
InterPro:IPR012309 InterPro:IPR012310 InterPro:IPR016059
Pfam:PF01068 Pfam:PF04675 Pfam:PF04679 PROSITE:PS00333
PROSITE:PS00697 PROSITE:PS50160 dictyBase:DDB_G0274493
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0051301 GO:GO:0046872 GO:GO:0003677 GenomeReviews:CM000151_GR
EMBL:AAFI02000012 GO:GO:0007049 GO:GO:0006310 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006289 GO:GO:0006273
eggNOG:COG1793 KO:K10747 GO:GO:0003910 GO:GO:0051103
Gene3D:1.10.3260.10 SUPFAM:SSF117018 TIGRFAMs:TIGR00574
RefSeq:XP_644124.1 HSSP:P18858 ProteinModelPortal:Q869E1
STRING:Q869E1 EnsemblProtists:DDB0232265 GeneID:8619554
KEGG:ddi:DDB_G0274493 OMA:SERYSIM Uniprot:Q869E1
Length = 1192
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 31/105 (29%), Positives = 58/105 (55%)
Query: 31 QKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDLTYRSSNQREPGQPSTPSTNLNTV 90
+K+ + +E++EKEK++ K++K E+ + + K K+L + ++ + L
Sbjct: 227 EKELKEKESKEKEKKEKEKKEKEEKDKKEKELKEKELKEKELKDKKEKELKEKEKELKDK 286
Query: 91 FRLIKEVQKKFRSREAEEKEKEDLVKQDK-LEESRSKGNPKLKDL 134
+ KE+++K +E EEKEKE K++K L+E K K K+L
Sbjct: 287 EKKEKELKEK-EKKEKEEKEKEKKEKKEKELKEKEEK-EKKEKEL 329
>UNIPROTKB|B1WB17 [details] [associations]
symbol:wibg "Partner of Y14 and mago" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISS]
[GO:0035145 "exon-exon junction complex" evidence=ISS] [GO:0043022
"ribosome binding" evidence=ISS] [GO:0045727 "positive regulation
of translation" evidence=ISS] InterPro:IPR015362 Pfam:PF09282
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000184
GO:GO:0043022 GO:GO:0045727 GO:GO:0035145
GeneTree:ENSGT00570000079156 SUPFAM:SSF101931 eggNOG:NOG114683
HOGENOM:HOG000215176 KO:K14294 CTD:84305 EMBL:BC161580
EMBL:BC170597 EMBL:BC170601 RefSeq:NP_001016274.1 UniGene:Str.846
ProteinModelPortal:B1WB17 SMR:B1WB17 PRIDE:B1WB17
Ensembl:ENSXETT00000047260 GeneID:549028 KEGG:xtr:549028
Xenbase:XB-GENE-943122 Bgee:B1WB17 Uniprot:B1WB17
Length = 200
Score = 104 (41.7 bits), Expect = 0.00087, P = 0.00087
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 8 REPGQPSTPSTNLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDKLEESRSKGNPKLKDL 67
++P +P +T T R +K +K R +E E+E+ + +QD LE P K+L
Sbjct: 72 QQPSKPDADTTLSKTAKRNMKRKEK--RKQEKGEREQVEDARQD-LERVNISETPVQKNL 128
Query: 68 TYRSSN-QREPGQPSTPST----NLNTVFRLIKEVQKKFRSREAEEKEKEDLVKQDK--- 119
T N P+ NL R ++E+Q+K S E +E KE L K +
Sbjct: 129 TSAHKNGSASSDNPAAEKAKKIKNLRKKLRQVEELQQKIDSGEIKEPSKEQLEKLSRRKA 188
Query: 120 LEE 122
LEE
Sbjct: 189 LEE 191
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 211 211 0.00081 112 3 11 23 0.43 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 552 (59 KB)
Total size of DFA: 138 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.11u 0.07s 36.18t Elapsed: 00:00:20
Total cpu time: 36.12u 0.07s 36.19t Elapsed: 00:00:21
Start: Thu Aug 15 12:27:49 2013 End: Thu Aug 15 12:28:10 2013