Query psy16789
Match_columns 608
No_of_seqs 433 out of 3915
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 22:07:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16789.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16789hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202|consensus 100.0 1.2E-98 3E-103 789.0 33.0 531 63-593 300-970 (972)
2 KOG0204|consensus 100.0 2.7E-89 5.9E-94 717.5 27.5 518 68-588 408-1005(1034)
3 TIGR01523 ATPase-IID_K-Na pota 100.0 9.2E-83 2E-87 733.7 46.1 530 63-593 327-1049(1053)
4 COG0474 MgtA Cation transport 100.0 3.7E-82 8E-87 722.2 36.5 517 63-579 316-902 (917)
5 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2.3E-80 4.9E-85 710.3 45.6 527 66-592 295-883 (884)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 6.8E-80 1.5E-84 712.2 46.2 535 65-600 314-994 (997)
7 TIGR01116 ATPase-IIA1_Ca sarco 100.0 9.9E-80 2.1E-84 706.5 46.1 525 65-590 259-917 (917)
8 TIGR01517 ATPase-IIB_Ca plasma 100.0 6.5E-78 1.4E-82 694.1 44.4 519 67-588 348-938 (941)
9 PRK15122 magnesium-transportin 100.0 1.4E-76 3.1E-81 675.3 44.4 515 65-594 339-900 (903)
10 KOG0203|consensus 100.0 1.2E-77 2.7E-82 629.0 19.0 514 29-600 408-1016(1019)
11 PRK10517 magnesium-transportin 100.0 7.8E-74 1.7E-78 651.8 40.9 512 66-594 342-900 (902)
12 TIGR01524 ATPase-IIIB_Mg magne 100.0 1.7E-72 3.7E-77 641.4 45.1 510 66-592 307-863 (867)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1.6E-69 3.4E-74 630.0 35.0 494 63-566 416-1046(1054)
14 TIGR01652 ATPase-Plipid phosph 100.0 1.5E-64 3.3E-69 590.1 35.6 507 80-598 344-1053(1057)
15 TIGR01647 ATPase-IIIA_H plasma 100.0 9.3E-63 2E-67 554.8 39.2 463 65-548 256-752 (755)
16 PLN03190 aminophospholipid tra 100.0 5.6E-60 1.2E-64 546.2 39.2 503 81-595 439-1145(1178)
17 KOG0208|consensus 100.0 9E-56 2E-60 471.4 26.9 508 74-591 447-1122(1140)
18 KOG0206|consensus 100.0 2.2E-57 4.7E-62 507.1 7.6 509 82-596 374-1081(1151)
19 KOG0210|consensus 100.0 2.4E-56 5.1E-61 457.9 13.3 496 82-594 394-1043(1051)
20 KOG0209|consensus 100.0 5.3E-47 1.2E-51 396.0 34.0 510 75-594 459-1149(1160)
21 PRK14010 potassium-transportin 100.0 1.1E-46 2.4E-51 410.9 23.2 305 63-413 266-589 (673)
22 PRK01122 potassium-transportin 100.0 1.5E-43 3.2E-48 386.8 26.2 306 66-414 269-597 (679)
23 TIGR01497 kdpB K+-transporting 100.0 2.2E-40 4.8E-45 361.0 22.9 292 71-404 275-585 (675)
24 KOG0205|consensus 100.0 1.2E-38 2.5E-43 326.4 15.1 372 63-442 295-697 (942)
25 TIGR01494 ATPase_P-type ATPase 100.0 1.5E-34 3.3E-39 314.6 24.6 273 73-409 208-483 (499)
26 COG2217 ZntA Cation transport 100.0 1.4E-32 3E-37 300.6 23.3 288 75-410 385-682 (713)
27 COG2216 KdpB High-affinity K+ 100.0 9.3E-33 2E-37 277.2 18.9 313 62-413 266-598 (681)
28 KOG0207|consensus 100.0 3E-30 6.6E-35 276.7 25.0 302 78-422 565-879 (951)
29 PRK11033 zntA zinc/cadmium/mer 100.0 1.5E-30 3.4E-35 292.7 22.9 284 75-409 416-710 (741)
30 TIGR01525 ATPase-IB_hvy heavy 100.0 1.1E-28 2.4E-33 271.2 23.7 294 72-410 223-530 (556)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.5E-27 3.2E-32 260.6 23.0 286 72-410 223-509 (536)
32 PRK10671 copA copper exporting 100.0 1.2E-26 2.7E-31 266.3 26.7 287 74-408 496-793 (834)
33 TIGR01511 ATPase-IB1_Cu copper 99.9 5.6E-27 1.2E-31 257.0 21.5 287 74-408 256-547 (562)
34 PF00689 Cation_ATPase_C: Cati 99.9 8.9E-25 1.9E-29 206.1 13.6 173 416-588 1-182 (182)
35 KOG4383|consensus 99.7 1.1E-17 2.5E-22 172.9 14.0 378 224-607 813-1344(1354)
36 PF00702 Hydrolase: haloacid d 99.7 1.3E-17 2.7E-22 161.7 11.7 109 208-346 103-215 (215)
37 COG4087 Soluble P-type ATPase 99.5 3.4E-14 7.4E-19 118.4 9.9 117 226-368 19-137 (152)
38 PF13246 Hydrolase_like2: Puta 99.5 2.5E-14 5.4E-19 117.4 5.7 79 43-128 1-90 (91)
39 KOG0202|consensus 99.5 1.9E-13 4E-18 146.6 10.7 127 2-133 352-513 (972)
40 PLN03190 aminophospholipid tra 99.3 2E-10 4.3E-15 134.9 23.0 123 34-166 531-680 (1178)
41 PF13246 Hydrolase_like2: Puta 99.3 5.7E-13 1.2E-17 109.3 1.3 79 124-202 1-90 (91)
42 PRK10513 sugar phosphate phosp 99.3 5.1E-11 1.1E-15 119.7 13.1 67 314-381 196-266 (270)
43 COG0561 Cof Predicted hydrolas 99.2 9E-11 2E-15 117.5 14.3 151 230-381 12-259 (264)
44 PRK15126 thiamin pyrimidine py 99.2 5.8E-11 1.3E-15 119.4 12.1 143 237-380 19-259 (272)
45 PRK01158 phosphoglycolate phos 99.2 1.1E-10 2.3E-15 114.4 13.2 151 230-381 12-227 (230)
46 COG0474 MgtA Cation transport 99.2 3.5E-09 7.6E-14 122.7 26.8 94 30-129 384-484 (917)
47 PRK10976 putative hydrolase; P 99.2 1.4E-10 3.1E-15 116.2 13.2 67 314-381 190-262 (266)
48 TIGR01487 SPP-like sucrose-pho 99.2 1.7E-10 3.6E-15 111.8 11.8 142 237-379 18-215 (215)
49 PLN02887 hydrolase family prot 99.1 3.6E-10 7.9E-15 123.0 13.2 67 314-381 507-577 (580)
50 PRK10530 pyridoxal phosphate ( 99.1 5.6E-10 1.2E-14 112.3 13.7 67 314-381 199-269 (272)
51 KOG0203|consensus 99.1 8.8E-12 1.9E-16 133.7 -0.2 264 56-358 325-638 (1019)
52 TIGR01482 SPP-subfamily Sucros 99.1 8.5E-10 1.8E-14 107.7 13.4 143 237-380 15-222 (225)
53 PF08282 Hydrolase_3: haloacid 99.1 6.3E-10 1.4E-14 110.2 12.6 143 236-379 14-254 (254)
54 TIGR02137 HSK-PSP phosphoserin 99.1 1.1E-09 2.3E-14 104.4 11.1 131 237-382 68-198 (203)
55 PRK11133 serB phosphoserine ph 99.0 1.6E-09 3.6E-14 110.2 11.5 130 237-379 181-315 (322)
56 TIGR01486 HAD-SF-IIB-MPGP mann 99.0 9.7E-09 2.1E-13 102.3 14.6 151 230-381 8-254 (256)
57 TIGR00099 Cof-subfamily Cof su 99.0 4.9E-09 1.1E-13 104.4 11.8 65 314-379 188-256 (256)
58 TIGR02726 phenyl_P_delta pheny 99.0 3.2E-09 7E-14 97.6 9.6 107 244-376 41-147 (169)
59 TIGR01522 ATPase-IIA2_Ca golgi 99.0 3.5E-07 7.7E-12 106.4 28.7 91 33-128 379-472 (884)
60 TIGR01652 ATPase-Plipid phosph 98.9 3.2E-08 6.9E-13 117.2 20.3 90 33-128 438-552 (1057)
61 TIGR01523 ATPase-IID_K-Na pota 98.9 8.6E-10 1.9E-14 129.1 6.7 92 33-129 445-570 (1053)
62 TIGR01517 ATPase-IIB_Ca plasma 98.9 3.4E-07 7.4E-12 107.2 26.7 90 33-128 415-513 (941)
63 TIGR01116 ATPase-IIA1_Ca sarco 98.9 8.8E-07 1.9E-11 103.4 29.9 90 33-129 349-463 (917)
64 PRK03669 mannosyl-3-phosphogly 98.9 2.1E-08 4.6E-13 100.7 14.0 143 238-381 25-266 (271)
65 COG0560 SerB Phosphoserine pho 98.9 1.2E-08 2.5E-13 97.8 9.8 119 236-367 76-199 (212)
66 TIGR01670 YrbI-phosphatas 3-de 98.8 1.5E-08 3.2E-13 92.4 9.9 106 245-380 36-146 (154)
67 TIGR00338 serB phosphoserine p 98.8 2.5E-08 5.3E-13 96.9 10.8 129 237-378 85-218 (219)
68 PRK00192 mannosyl-3-phosphogly 98.7 1.4E-07 3E-12 94.9 14.2 67 314-381 190-268 (273)
69 KOG0204|consensus 98.7 4.4E-08 9.6E-13 106.0 9.7 94 30-129 472-576 (1034)
70 PRK09484 3-deoxy-D-manno-octul 98.7 1.1E-07 2.4E-12 89.4 10.2 101 244-374 55-159 (183)
71 TIGR01106 ATPase-IIC_X-K sodiu 98.7 1.4E-07 3E-12 110.9 12.5 94 33-129 390-495 (997)
72 TIGR02471 sucr_syn_bact_C sucr 98.6 3.7E-07 8.1E-12 89.7 12.2 67 314-381 159-233 (236)
73 COG1778 Low specificity phosph 98.6 7.8E-08 1.7E-12 83.8 6.2 114 245-388 43-164 (170)
74 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.6 2.3E-07 4.9E-12 88.7 9.6 117 237-364 80-200 (201)
75 PRK08238 hypothetical protein; 98.6 2.8E-05 6E-10 83.6 25.4 94 237-352 72-165 (479)
76 PRK13582 thrH phosphoserine ph 98.5 6.8E-07 1.5E-11 85.8 11.4 125 237-379 68-195 (205)
77 COG0546 Gph Predicted phosphat 98.5 8.4E-07 1.8E-11 86.1 10.1 126 236-379 88-217 (220)
78 TIGR01485 SPP_plant-cyano sucr 98.5 2E-06 4.3E-11 85.2 12.8 145 236-381 20-245 (249)
79 KOG1615|consensus 98.4 5.8E-07 1.3E-11 81.1 6.3 98 238-352 89-199 (227)
80 TIGR01657 P-ATPase-V P-type AT 98.4 3.2E-07 6.9E-12 108.6 5.1 169 36-220 491-681 (1054)
81 PRK13222 phosphoglycolate phos 98.3 2.6E-06 5.7E-11 83.0 10.5 128 236-381 92-223 (226)
82 TIGR03333 salvage_mtnX 2-hydro 98.3 2.1E-06 4.6E-11 83.0 9.6 111 236-352 69-182 (214)
83 KOG0206|consensus 98.3 5.2E-07 1.1E-11 103.6 5.8 135 31-176 459-615 (1151)
84 TIGR01454 AHBA_synth_RP 3-amin 98.3 3E-06 6.6E-11 81.3 9.5 125 237-379 75-203 (205)
85 PLN02954 phosphoserine phospha 98.2 1.1E-05 2.3E-10 78.6 12.3 126 238-377 85-221 (224)
86 PF12710 HAD: haloacid dehalog 98.2 3.8E-06 8.3E-11 79.5 8.9 92 240-343 92-192 (192)
87 TIGR01489 DKMTPPase-SF 2,3-dik 98.2 4.6E-06 1E-10 78.6 9.5 114 236-350 71-186 (188)
88 TIGR02463 MPGP_rel mannosyl-3- 98.2 1.4E-05 3.1E-10 77.6 12.8 40 238-277 17-56 (221)
89 KOG0210|consensus 98.2 9.2E-06 2E-10 86.4 11.7 225 31-271 469-745 (1051)
90 PLN02382 probable sucrose-phos 98.2 1E-05 2.2E-10 85.7 12.1 140 241-381 32-258 (413)
91 TIGR02461 osmo_MPG_phos mannos 98.2 9.2E-06 2E-10 79.0 10.3 48 230-277 8-55 (225)
92 cd01427 HAD_like Haloacid deha 98.2 3.6E-06 7.8E-11 74.4 6.6 115 235-349 22-137 (139)
93 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.1E-05 2.4E-10 78.2 9.9 107 237-350 74-184 (219)
94 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 1.3E-05 2.9E-10 76.6 9.8 104 236-352 86-197 (202)
95 PLN02770 haloacid dehalogenase 98.1 1.3E-05 2.8E-10 79.3 9.9 118 237-370 108-228 (248)
96 PRK13288 pyrophosphatase PpaX; 98.1 1E-05 2.2E-10 78.2 8.9 125 237-379 82-210 (214)
97 TIGR01449 PGP_bact 2-phosphogl 98.1 9.3E-06 2E-10 78.3 8.4 116 237-368 85-204 (213)
98 PRK13226 phosphoglycolate phos 98.1 1.6E-05 3.4E-10 77.7 9.3 124 237-378 95-223 (229)
99 PRK13223 phosphoglycolate phos 98.1 2E-05 4.4E-10 79.0 10.0 126 236-379 100-229 (272)
100 PRK10517 magnesium-transportin 98.0 1.2E-05 2.5E-10 93.5 8.9 84 36-129 401-485 (902)
101 PRK15122 magnesium-transportin 98.0 2.3E-05 5E-10 91.1 10.3 83 37-129 400-483 (903)
102 PRK12702 mannosyl-3-phosphogly 98.0 9.1E-05 2E-09 73.1 12.5 43 236-278 17-59 (302)
103 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.1E-05 2.4E-10 75.2 6.0 100 238-345 74-177 (177)
104 PRK10826 2-deoxyglucose-6-phos 97.9 2.2E-05 4.8E-10 76.3 7.7 97 236-351 91-190 (222)
105 TIGR01422 phosphonatase phosph 97.9 4E-05 8.8E-10 76.1 9.0 95 237-347 99-195 (253)
106 PRK10187 trehalose-6-phosphate 97.9 0.00012 2.5E-09 73.2 12.3 136 237-379 36-240 (266)
107 PLN03243 haloacid dehalogenase 97.9 6E-05 1.3E-09 74.9 9.6 116 237-368 109-225 (260)
108 PRK13225 phosphoglycolate phos 97.9 9.4E-05 2E-09 74.0 11.0 122 237-379 142-267 (273)
109 PRK14502 bifunctional mannosyl 97.8 0.00018 3.9E-09 78.9 12.7 40 238-277 434-473 (694)
110 TIGR01647 ATPase-IIIA_H plasma 97.8 4.4E-05 9.5E-10 87.4 8.4 79 37-128 318-397 (755)
111 TIGR01524 ATPase-IIIB_Mg magne 97.8 0.00015 3.2E-09 84.3 12.8 84 36-129 366-450 (867)
112 PF05116 S6PP: Sucrose-6F-phos 97.8 0.00015 3.3E-09 71.5 10.5 68 313-381 164-244 (247)
113 PTZ00174 phosphomannomutase; P 97.8 0.00017 3.6E-09 71.4 10.7 52 314-366 188-244 (247)
114 TIGR03351 PhnX-like phosphonat 97.8 9.5E-05 2.1E-09 71.7 8.6 98 236-349 86-186 (220)
115 PRK11587 putative phosphatase; 97.7 0.00019 4.2E-09 69.4 9.7 115 237-368 83-198 (218)
116 TIGR01672 AphA HAD superfamily 97.7 0.00016 3.4E-09 70.4 8.9 93 237-352 114-213 (237)
117 PRK13478 phosphonoacetaldehyde 97.7 0.00018 3.9E-09 72.1 9.6 100 237-352 101-205 (267)
118 TIGR01548 HAD-SF-IA-hyp1 haloa 97.6 0.00013 2.8E-09 69.5 7.3 93 236-345 105-197 (197)
119 TIGR01545 YfhB_g-proteo haloac 97.6 0.0003 6.6E-09 67.5 9.0 106 237-352 94-201 (210)
120 PRK11590 hypothetical protein; 97.5 0.00039 8.5E-09 66.9 8.9 106 237-352 95-202 (211)
121 TIGR02253 CTE7 HAD superfamily 97.5 0.00026 5.7E-09 68.6 7.8 100 237-352 94-195 (221)
122 TIGR01428 HAD_type_II 2-haloal 97.5 0.00031 6.8E-09 66.8 8.0 98 237-350 92-189 (198)
123 PLN02575 haloacid dehalogenase 97.5 0.00045 9.7E-09 71.6 9.3 116 237-368 216-332 (381)
124 PRK14501 putative bifunctional 97.5 0.0016 3.5E-08 74.7 14.3 165 203-379 483-720 (726)
125 PRK06698 bifunctional 5'-methy 97.4 0.00071 1.5E-08 73.3 10.6 121 237-379 330-453 (459)
126 TIGR01484 HAD-SF-IIB HAD-super 97.4 0.00085 1.8E-08 64.2 9.9 39 237-275 17-55 (204)
127 PRK14988 GMP/IMP nucleotidase; 97.4 0.00029 6.2E-09 68.5 6.6 96 237-348 93-188 (224)
128 PRK11009 aphA acid phosphatase 97.4 0.00054 1.2E-08 66.6 7.8 86 237-347 114-205 (237)
129 PLN02940 riboflavin kinase 97.4 0.00046 1E-08 72.6 7.7 97 237-349 93-190 (382)
130 PHA02530 pseT polynucleotide k 97.3 0.00054 1.2E-08 69.9 7.8 108 234-350 184-293 (300)
131 TIGR01544 HAD-SF-IE haloacid d 97.3 0.0033 7.3E-08 62.2 12.9 137 236-379 120-273 (277)
132 PF13419 HAD_2: Haloacid dehal 97.3 0.00031 6.8E-09 64.9 5.1 98 236-349 76-173 (176)
133 PRK09449 dUMP phosphatase; Pro 97.3 0.00091 2E-08 65.0 8.5 124 237-379 95-222 (224)
134 TIGR01990 bPGM beta-phosphoglu 97.3 0.00034 7.3E-09 65.7 5.2 94 237-348 87-180 (185)
135 smart00775 LNS2 LNS2 domain. T 97.3 0.0016 3.4E-08 59.4 9.2 104 235-348 25-141 (157)
136 TIGR01509 HAD-SF-IA-v3 haloaci 97.3 0.00075 1.6E-08 63.1 7.2 95 237-348 85-179 (183)
137 PLN02779 haloacid dehalogenase 97.2 0.0012 2.5E-08 66.8 8.3 116 237-368 144-263 (286)
138 TIGR02009 PGMB-YQAB-SF beta-ph 97.2 0.00066 1.4E-08 63.7 5.9 91 237-349 88-182 (185)
139 TIGR02254 YjjG/YfnB HAD superf 97.2 0.00099 2.2E-08 64.6 7.3 95 237-348 97-193 (224)
140 TIGR01685 MDP-1 magnesium-depe 97.1 0.0019 4.2E-08 59.6 8.4 99 231-351 39-155 (174)
141 PRK06769 hypothetical protein; 97.1 0.0011 2.4E-08 61.5 6.8 97 238-350 29-134 (173)
142 PLN02811 hydrolase 97.1 0.0013 2.8E-08 63.7 7.1 97 237-349 78-180 (220)
143 KOG0208|consensus 97.0 0.00054 1.2E-08 76.3 3.8 93 34-131 524-648 (1140)
144 PRK08942 D,D-heptose 1,7-bisph 97.0 0.0037 7.9E-08 58.6 9.0 93 238-348 30-142 (181)
145 TIGR02252 DREG-2 REG-2-like, H 96.9 0.0017 3.7E-08 62.0 6.3 95 237-348 105-200 (203)
146 TIGR01662 HAD-SF-IIIA HAD-supe 96.9 0.0026 5.6E-08 56.1 6.8 94 236-349 24-127 (132)
147 PLN02919 haloacid dehalogenase 96.9 0.0039 8.4E-08 74.1 9.8 131 238-384 162-296 (1057)
148 COG4359 Uncharacterized conser 96.9 0.0014 2.9E-08 59.2 4.6 102 237-351 73-184 (220)
149 TIGR01549 HAD-SF-IA-v1 haloaci 96.7 0.0032 7E-08 57.1 6.2 91 237-346 64-154 (154)
150 TIGR01681 HAD-SF-IIIC HAD-supe 96.7 0.005 1.1E-07 54.0 6.8 88 237-344 29-126 (128)
151 COG4030 Uncharacterized protei 96.6 0.0076 1.7E-07 56.2 7.8 140 238-380 84-262 (315)
152 TIGR00685 T6PP trehalose-phosp 96.6 0.0088 1.9E-07 59.0 9.0 65 310-379 163-239 (244)
153 COG3769 Predicted hydrolase (H 96.6 0.012 2.5E-07 54.9 8.6 38 240-277 26-63 (274)
154 TIGR01261 hisB_Nterm histidino 96.6 0.004 8.8E-08 57.0 5.6 92 238-351 30-145 (161)
155 PF06888 Put_Phosphatase: Puta 96.5 0.0057 1.2E-07 59.2 6.4 103 237-341 71-184 (234)
156 PLN02580 trehalose-phosphatase 96.4 0.044 9.6E-07 57.0 12.9 63 313-380 300-374 (384)
157 TIGR01668 YqeG_hyp_ppase HAD s 96.4 0.0084 1.8E-07 55.5 6.9 107 208-348 21-131 (170)
158 TIGR00213 GmhB_yaeD D,D-heptos 96.4 0.016 3.4E-07 54.0 8.6 27 238-264 27-53 (176)
159 smart00577 CPDc catalytic doma 96.4 0.0042 9.2E-08 56.0 4.4 96 236-351 44-140 (148)
160 PRK14010 potassium-transportin 96.3 0.067 1.4E-06 60.1 14.0 186 34-272 326-521 (673)
161 PRK09456 ?-D-glucose-1-phospha 96.3 0.01 2.2E-07 56.5 6.7 98 237-350 84-182 (199)
162 TIGR01675 plant-AP plant acid 96.3 0.032 7E-07 53.7 10.0 88 236-340 119-210 (229)
163 PRK10563 6-phosphogluconate ph 96.2 0.0037 8E-08 60.6 3.6 96 237-351 88-184 (221)
164 TIGR01656 Histidinol-ppas hist 96.2 0.0091 2E-07 53.8 5.7 93 237-350 27-142 (147)
165 TIGR01533 lipo_e_P4 5'-nucleot 96.2 0.03 6.6E-07 55.4 9.6 85 236-343 117-205 (266)
166 TIGR02247 HAD-1A3-hyp Epoxide 96.0 0.0055 1.2E-07 58.9 3.7 98 236-349 93-192 (211)
167 TIGR01664 DNA-3'-Pase DNA 3'-p 96.0 0.018 3.9E-07 53.0 6.8 95 238-350 43-159 (166)
168 KOG0209|consensus 96.0 0.0029 6.2E-08 69.4 1.4 82 37-121 519-609 (1160)
169 PLN02205 alpha,alpha-trehalose 96.0 0.095 2.1E-06 60.7 13.7 38 237-274 616-654 (854)
170 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.9 0.041 9E-07 54.1 9.5 93 230-346 17-115 (242)
171 COG2179 Predicted hydrolase of 95.8 0.032 6.8E-07 50.0 7.0 110 204-348 20-133 (175)
172 PF13344 Hydrolase_6: Haloacid 95.7 0.021 4.5E-07 47.8 5.4 88 230-346 7-99 (101)
173 PRK10725 fructose-1-P/6-phosph 95.6 0.023 5E-07 53.3 6.1 93 239-349 90-182 (188)
174 TIGR01691 enolase-ppase 2,3-di 95.5 0.053 1.1E-06 52.3 8.2 99 235-351 93-194 (220)
175 PRK05446 imidazole glycerol-ph 95.5 0.057 1.2E-06 55.8 8.8 98 237-351 30-146 (354)
176 PRK01122 potassium-transportin 95.5 0.11 2.5E-06 58.3 11.6 184 36-273 328-526 (679)
177 PRK10444 UMP phosphatase; Prov 95.5 0.076 1.6E-06 52.4 9.2 48 230-277 10-60 (248)
178 TIGR01993 Pyr-5-nucltdase pyri 95.4 0.033 7.1E-07 52.2 6.2 98 237-349 84-181 (184)
179 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.4 0.15 3.4E-06 50.5 11.0 48 230-277 10-64 (257)
180 PLN02423 phosphomannomutase 95.3 0.15 3.2E-06 50.3 10.8 38 314-352 189-231 (245)
181 PLN03017 trehalose-phosphatase 95.3 0.28 6E-06 50.7 12.9 34 237-271 133-166 (366)
182 COG0637 Predicted phosphatase/ 95.2 0.048 1.1E-06 52.8 6.8 97 236-348 85-181 (221)
183 KOG3120|consensus 95.0 0.022 4.7E-07 53.3 3.5 121 237-357 84-214 (256)
184 TIGR01497 kdpB K+-transporting 94.8 0.3 6.5E-06 54.9 12.4 192 35-272 328-526 (675)
185 TIGR01686 FkbH FkbH-like domai 94.5 0.14 3.1E-06 52.6 8.3 91 237-352 31-129 (320)
186 PRK10748 flavin mononucleotide 94.4 0.076 1.7E-06 52.1 5.8 94 237-352 113-207 (238)
187 PF03767 Acid_phosphat_B: HAD 94.2 0.078 1.7E-06 51.5 5.5 88 237-341 115-207 (229)
188 PLN02645 phosphoglycolate phos 94.0 0.12 2.7E-06 52.8 6.7 51 230-280 37-90 (311)
189 PF08235 LNS2: LNS2 (Lipin/Ned 94.0 0.2 4.4E-06 45.1 7.2 104 236-348 26-141 (157)
190 PHA02597 30.2 hypothetical pro 93.2 0.2 4.2E-06 47.5 6.1 91 237-351 74-172 (197)
191 KOG3040|consensus 93.1 0.47 1E-05 44.1 7.9 52 226-277 12-66 (262)
192 TIGR01680 Veg_Stor_Prot vegeta 93.1 0.65 1.4E-05 45.7 9.5 88 235-339 143-235 (275)
193 TIGR01452 PGP_euk phosphoglyco 92.9 1.3 2.8E-05 44.5 11.9 92 230-350 11-108 (279)
194 TIGR01457 HAD-SF-IIA-hyp2 HAD- 92.8 0.63 1.4E-05 45.9 9.4 55 230-284 10-67 (249)
195 TIGR01689 EcbF-BcbF capsule bi 92.8 0.38 8.3E-06 41.8 6.7 32 236-267 23-54 (126)
196 PF09419 PGP_phosphatase: Mito 92.6 0.66 1.4E-05 42.5 8.3 112 207-351 36-163 (168)
197 TIGR01684 viral_ppase viral ph 91.7 0.39 8.4E-06 47.8 6.1 54 238-291 146-200 (301)
198 TIGR01493 HAD-SF-IA-v2 Haloaci 91.6 0.14 3E-06 47.4 2.8 86 237-345 90-175 (175)
199 COG1011 Predicted hydrolase (H 91.4 0.57 1.2E-05 45.3 7.1 97 237-352 99-199 (229)
200 PF02358 Trehalose_PPase: Treh 89.5 1.8 3.9E-05 42.3 8.7 64 306-369 157-233 (235)
201 PLN02151 trehalose-phosphatase 89.3 7 0.00015 40.4 13.0 35 238-273 121-155 (354)
202 PHA03398 viral phosphatase sup 89.2 0.83 1.8E-05 45.5 6.0 52 238-289 148-200 (303)
203 PLN02177 glycerol-3-phosphate 88.1 5.9 0.00013 43.2 12.2 98 238-353 111-215 (497)
204 COG1877 OtsB Trehalose-6-phosp 87.7 4 8.6E-05 40.4 9.6 139 205-346 11-218 (266)
205 TIGR02244 HAD-IG-Ncltidse HAD 87.1 1.8 3.9E-05 44.6 7.1 105 239-346 186-316 (343)
206 COG0647 NagD Predicted sugar p 86.8 14 0.0003 36.7 13.0 110 228-371 15-130 (269)
207 COG0241 HisB Histidinol phosph 86.8 2.1 4.6E-05 39.6 6.7 97 238-348 32-144 (181)
208 KOG3085|consensus 86.7 1.7 3.7E-05 42.1 6.3 105 239-361 115-221 (237)
209 KOG0205|consensus 85.3 1.2 2.5E-05 48.5 4.8 48 75-128 391-439 (942)
210 TIGR01663 PNK-3'Pase polynucle 83.0 2.2 4.7E-05 46.7 5.8 40 238-277 198-249 (526)
211 TIGR02251 HIF-SF_euk Dullard-l 82.0 1.3 2.8E-05 40.5 3.1 92 236-350 41-136 (162)
212 TIGR01460 HAD-SF-IIA Haloacid 81.5 7.7 0.00017 37.8 8.7 50 230-279 7-60 (236)
213 COG3700 AphA Acid phosphatase 81.2 3.8 8.1E-05 37.3 5.6 91 238-351 115-210 (237)
214 TIGR01494 ATPase_P-type ATPase 78.2 7.3 0.00016 42.8 8.0 54 55-127 259-313 (499)
215 PF13242 Hydrolase_like: HAD-h 74.8 2 4.4E-05 33.4 1.9 52 317-368 12-70 (75)
216 PF05822 UMPH-1: Pyrimidine 5' 68.0 35 0.00076 33.3 8.9 134 237-379 90-241 (246)
217 TIGR01459 HAD-SF-IIA-hyp4 HAD- 66.8 2.9 6.3E-05 41.0 1.4 96 239-349 140-237 (242)
218 PF06570 DUF1129: Protein of u 65.9 1.1E+02 0.0023 29.1 11.9 9 585-593 194-202 (206)
219 TIGR01452 PGP_euk phosphoglyco 64.2 35 0.00077 34.1 8.7 32 317-348 210-242 (279)
220 KOG2914|consensus 63.7 22 0.00048 34.2 6.7 115 237-367 92-212 (222)
221 PF12689 Acid_PPase: Acid Phos 58.8 62 0.0013 29.7 8.4 40 238-277 46-86 (169)
222 TIGR01456 CECR5 HAD-superfamil 58.7 54 0.0012 33.6 9.1 51 229-279 8-66 (321)
223 KOG3109|consensus 58.2 67 0.0014 30.7 8.5 104 232-348 94-200 (244)
224 PF13380 CoA_binding_2: CoA bi 55.3 16 0.00034 31.2 3.7 40 238-277 64-104 (116)
225 COG0279 GmhA Phosphoheptose is 53.0 34 0.00073 31.1 5.4 55 201-271 100-154 (176)
226 COG2503 Predicted secreted aci 52.1 97 0.0021 30.1 8.6 86 238-345 123-212 (274)
227 TIGR01501 MthylAspMutase methy 51.4 72 0.0016 28.0 7.2 72 207-278 25-113 (134)
228 PRK14188 bifunctional 5,10-met 50.5 2.8E+02 0.0062 28.0 15.3 165 192-369 10-208 (296)
229 PRK14189 bifunctional 5,10-met 50.4 2.2E+02 0.0048 28.6 11.4 165 192-369 11-208 (285)
230 PF00389 2-Hacid_dh: D-isomer 47.4 1.9E+02 0.004 25.0 11.8 36 316-352 52-89 (133)
231 PRK14194 bifunctional 5,10-met 47.0 3.3E+02 0.007 27.7 15.3 167 190-369 10-209 (301)
232 COG1916 Uncharacterized homolo 46.8 1.1E+02 0.0024 31.6 8.5 41 237-277 96-136 (388)
233 TIGR00216 ispH_lytB (E)-4-hydr 46.8 1.6E+02 0.0034 29.5 9.7 150 199-352 101-262 (280)
234 PTZ00445 p36-lilke protein; Pr 46.7 1.2E+02 0.0026 29.0 8.3 133 203-348 34-200 (219)
235 TIGR02250 FCP1_euk FCP1-like p 44.6 34 0.00074 30.9 4.4 41 237-278 58-98 (156)
236 cd05013 SIS_RpiR RpiR-like pro 44.5 81 0.0017 27.0 6.8 107 241-352 2-112 (139)
237 PRK12360 4-hydroxy-3-methylbut 40.6 2E+02 0.0043 28.9 9.3 148 199-352 104-263 (281)
238 cd02071 MM_CoA_mut_B12_BD meth 40.6 53 0.0011 28.2 4.8 55 224-278 49-105 (122)
239 PRK01045 ispH 4-hydroxy-3-meth 39.7 2E+02 0.0044 29.1 9.3 152 198-352 100-264 (298)
240 cd05017 SIS_PGI_PMI_1 The memb 39.2 62 0.0013 27.5 5.0 36 238-275 55-90 (119)
241 cd00860 ThrRS_anticodon ThrRS 38.0 79 0.0017 24.9 5.2 46 232-277 7-53 (91)
242 TIGR03127 RuMP_HxlB 6-phospho 37.3 2.7E+02 0.0059 25.4 9.4 104 240-352 18-124 (179)
243 PF11019 DUF2608: Protein of u 37.0 1.3E+02 0.0027 29.7 7.3 104 238-344 82-196 (252)
244 PF03419 Peptidase_U4: Sporula 36.4 4.6E+02 0.0099 26.4 12.4 27 568-594 127-153 (293)
245 KOG2882|consensus 35.2 61 0.0013 32.5 4.7 49 229-277 30-81 (306)
246 PRK02261 methylaspartate mutas 35.0 1.8E+02 0.004 25.5 7.4 71 207-277 27-114 (137)
247 TIGR00640 acid_CoA_mut_C methy 34.2 73 0.0016 27.9 4.6 72 207-278 26-108 (132)
248 COG0309 HypE Hydrogenase matur 33.8 1.9E+02 0.0041 29.7 8.0 84 231-333 219-306 (339)
249 PF02401 LYTB: LytB protein; 32.8 1.5E+02 0.0032 29.8 7.0 47 306-352 215-263 (281)
250 cd02072 Glm_B12_BD B12 binding 32.5 98 0.0021 27.0 5.0 72 207-278 23-111 (128)
251 cd02067 B12-binding B12 bindin 31.8 81 0.0018 26.7 4.5 55 224-278 49-105 (119)
252 PRK14167 bifunctional 5,10-met 31.5 5.6E+02 0.012 25.9 11.3 163 193-368 11-210 (297)
253 CHL00200 trpA tryptophan synth 31.0 3.9E+02 0.0085 26.5 9.7 40 313-352 188-231 (263)
254 KOG3128|consensus 30.8 1.8E+02 0.0039 28.5 6.8 134 238-379 139-290 (298)
255 cd05014 SIS_Kpsf KpsF-like pro 30.8 56 0.0012 27.9 3.4 30 238-267 59-88 (128)
256 PRK14179 bifunctional 5,10-met 30.6 5.7E+02 0.012 25.7 14.4 165 192-369 10-208 (284)
257 PF14163 SieB: Superinfection 30.4 1.1E+02 0.0023 27.4 5.3 23 566-588 33-55 (151)
258 cd05008 SIS_GlmS_GlmD_1 SIS (S 30.1 50 0.0011 28.2 2.9 27 239-265 59-85 (126)
259 PF14336 DUF4392: Domain of un 29.8 1.1E+02 0.0024 30.8 5.7 38 240-277 63-101 (291)
260 COG3707 AmiR Response regulato 29.3 2.2E+02 0.0047 26.7 6.9 71 204-278 22-102 (194)
261 PF00875 DNA_photolyase: DNA p 29.0 3.4E+02 0.0074 24.4 8.5 39 240-278 53-91 (165)
262 PRK06552 keto-hydroxyglutarate 28.7 5.2E+02 0.011 24.6 12.0 118 234-352 19-183 (213)
263 PLN02645 phosphoglycolate phos 28.6 92 0.002 31.7 5.1 28 320-347 241-269 (311)
264 TIGR00696 wecB_tagA_cpsF bacte 28.5 3.8E+02 0.0082 24.8 8.6 35 241-276 36-70 (177)
265 cd04906 ACT_ThrD-I_1 First of 28.3 86 0.0019 24.9 3.8 34 231-264 43-77 (85)
266 PF08645 PNK3P: Polynucleotide 28.2 49 0.0011 30.0 2.7 23 239-261 31-53 (159)
267 PRK14719 bifunctional RNAse/5- 27.8 1.2E+02 0.0025 31.8 5.6 99 240-344 8-111 (360)
268 PF03904 DUF334: Domain of unk 27.8 1.6E+02 0.0034 28.2 5.8 25 569-593 201-229 (230)
269 COG1832 Predicted CoA-binding 27.4 1.1E+02 0.0025 26.8 4.5 32 229-260 19-50 (140)
270 COG1436 NtpG Archaeal/vacuolar 27.2 1.6E+02 0.0034 24.6 5.2 58 213-270 4-63 (104)
271 PF06941 NT5C: 5' nucleotidase 26.4 55 0.0012 30.5 2.7 28 237-264 73-100 (191)
272 PF02679 ComA: (2R)-phospho-3- 26.4 54 0.0012 32.0 2.7 110 238-374 52-172 (244)
273 cd05710 SIS_1 A subgroup of th 26.1 60 0.0013 27.7 2.7 29 238-266 59-87 (120)
274 PF03129 HGTP_anticodon: Antic 26.1 1.5E+02 0.0032 23.6 5.0 49 230-278 3-55 (94)
275 PF02254 TrkA_N: TrkA-N domain 26.0 3.8E+02 0.0082 22.1 8.0 101 240-350 8-113 (116)
276 PF01488 Shikimate_DH: Shikima 25.9 1.1E+02 0.0023 26.8 4.3 35 240-274 22-56 (135)
277 PF02547 Queuosine_synth: Queu 25.8 1.9E+02 0.0042 29.8 6.6 78 242-344 186-263 (341)
278 COG1703 ArgK Putative periplas 25.7 7.2E+02 0.016 25.3 12.9 105 229-351 54-171 (323)
279 TIGR03849 arch_ComA phosphosul 25.7 2.1E+02 0.0045 27.9 6.5 72 239-334 40-122 (237)
280 TIGR02854 spore_II_GA sigma-E 25.5 7E+02 0.015 25.0 11.8 14 424-437 8-21 (288)
281 TIGR02230 ATPase_gene1 F0F1-AT 25.1 1.6E+02 0.0035 24.4 4.8 18 529-546 39-56 (100)
282 cd00859 HisRS_anticodon HisRS 25.0 1.4E+02 0.0031 23.1 4.7 46 232-277 7-53 (91)
283 PRK01424 S-adenosylmethionine: 24.9 1.5E+02 0.0033 30.5 5.6 72 242-336 208-279 (366)
284 KOG1250|consensus 24.8 2.4E+02 0.0052 29.6 7.0 73 240-340 99-174 (457)
285 COG0809 QueA S-adenosylmethion 24.7 1E+02 0.0022 31.4 4.2 25 312-336 235-259 (348)
286 COG0078 ArgF Ornithine carbamo 24.7 7.5E+02 0.016 25.1 10.4 35 240-278 90-124 (310)
287 TIGR00129 fdhD_narQ formate de 24.1 1.2E+02 0.0026 29.6 4.6 36 242-277 181-216 (237)
288 PF12017 Tnp_P_element: Transp 23.9 1.2E+02 0.0026 29.5 4.5 39 240-278 196-234 (236)
289 cd06533 Glyco_transf_WecG_TagA 23.7 5E+02 0.011 23.7 8.5 35 241-276 34-68 (171)
290 PRK15108 biotin synthase; Prov 23.7 7.2E+02 0.016 25.7 10.6 85 240-337 111-198 (345)
291 PF13541 ChlI: Subunit ChlI of 23.5 3E+02 0.0064 23.7 6.4 41 221-261 77-119 (121)
292 PRK08309 short chain dehydroge 23.3 5.9E+02 0.013 23.4 9.9 92 243-339 13-118 (177)
293 PF06609 TRI12: Fungal trichot 23.2 8.7E+02 0.019 27.4 11.6 17 521-537 298-315 (599)
294 PF10852 DUF2651: Protein of u 23.1 3.8E+02 0.0083 21.2 6.4 31 564-594 49-79 (82)
295 TIGR02370 pyl_corrinoid methyl 23.1 88 0.0019 29.5 3.4 70 207-278 108-189 (197)
296 PRK00724 formate dehydrogenase 22.9 1.3E+02 0.0029 29.8 4.8 36 242-277 210-245 (263)
297 PF05240 APOBEC_C: APOBEC-like 22.7 1.1E+02 0.0024 22.2 3.0 24 240-263 2-25 (55)
298 PLN02389 biotin synthase 22.7 6.5E+02 0.014 26.5 10.1 86 239-337 152-240 (379)
299 cd01017 AdcA Metal binding pro 22.2 2E+02 0.0043 28.7 6.1 55 223-277 187-245 (282)
300 KOG1504|consensus 21.9 1.7E+02 0.0037 28.6 5.0 37 316-352 178-218 (346)
301 COG1171 IlvA Threonine dehydra 21.8 2.5E+02 0.0054 29.1 6.5 62 255-344 76-138 (347)
302 cd04886 ACT_ThrD-II-like C-ter 21.5 3.3E+02 0.0071 19.8 7.0 55 203-257 15-72 (73)
303 PRK11598 putative metal depend 21.4 4.2E+02 0.0092 29.4 8.7 24 563-586 119-142 (545)
304 PRK11337 DNA-binding transcrip 21.4 4.6E+02 0.01 26.1 8.6 108 240-352 128-239 (292)
305 PRK00147 queA S-adenosylmethio 21.1 2E+02 0.0042 29.7 5.6 78 242-344 186-263 (342)
306 PF04056 Ssl1: Ssl1-like; Int 21.0 4.6E+02 0.0099 24.7 7.6 76 188-275 75-153 (193)
307 cd01137 PsaA Metal binding pro 20.6 2.2E+02 0.0048 28.5 6.0 55 223-277 193-251 (287)
308 TIGR00113 queA S-adenosylmethi 20.6 2.2E+02 0.0047 29.5 5.8 72 242-336 187-258 (344)
309 PRK11557 putative DNA-binding 20.5 6.5E+02 0.014 24.8 9.4 109 240-352 116-227 (278)
310 COG5012 Predicted cobalamin bi 20.5 63 0.0014 30.9 1.8 73 207-279 128-210 (227)
311 PRK05265 pyridoxine 5'-phospha 20.4 1.5E+02 0.0032 28.8 4.3 39 239-278 112-150 (239)
312 PRK14176 bifunctional 5,10-met 20.3 6E+02 0.013 25.6 8.7 166 190-368 14-213 (287)
313 PRK00087 4-hydroxy-3-methylbut 20.3 5.1E+02 0.011 29.5 9.4 148 199-352 101-260 (647)
314 cd05013 SIS_RpiR RpiR-like pro 20.2 99 0.0021 26.4 3.0 27 240-266 74-100 (139)
315 COG1157 FliI Flagellar biosynt 20.2 2.8E+02 0.0062 29.4 6.5 92 223-360 188-283 (441)
316 COG4420 Predicted membrane pro 20.2 1.8E+02 0.0039 27.0 4.5 43 395-437 60-102 (191)
317 PF01380 SIS: SIS domain SIS d 20.2 1.5E+02 0.0033 25.1 4.2 35 236-270 63-97 (131)
318 cd04795 SIS SIS domain. SIS (S 20.1 1.2E+02 0.0026 23.6 3.2 22 239-260 60-81 (87)
No 1
>KOG0202|consensus
Probab=100.00 E-value=1.2e-98 Score=789.05 Aligned_cols=531 Identities=40% Similarity=0.653 Sum_probs=483.1
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--------------------------
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL-------------------------- 116 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~-------------------------- 116 (608)
|+++.++++|..+|.+++.+++++|-.++.++.+|+|.|||||+|+|+|...-+
T Consensus 300 aVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v 379 (972)
T KOG0202|consen 300 AVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEV 379 (972)
T ss_pred chhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCce
Confidence 778888999999999999999999999999999999999999999987655320
Q ss_pred -----cc------------hhhhhccccceeeecccc-----CCCccHHHHHHHHHHcCccccc--cc-----------c
Q psy16789 117 -----HR------------LLEVGCVCNNASIIGDSL-----LGQPTEGALLAAGMKFGLYAVN--EH-----------Y 161 (608)
Q Consensus 117 -----kg------------~~ei~~lc~~a~~~~~~~-----~gdp~E~Al~~~~~~~~~~~~~--~~-----------~ 161 (608)
++ ..++.++||++....+.. .|+|||.||..+++|.++...+ .. |
T Consensus 380 ~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~ 459 (972)
T KOG0202|consen 380 FKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVY 459 (972)
T ss_pred EecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHH
Confidence 00 123779999998887765 9999999999999999986632 22 3
Q ss_pred ----ccceeeeCChHHHHHHhHhhhc----CCcCCCCchhHHHHhhhh----------------------hhhHHHhhcc
Q psy16789 162 ----VRLKEYPFSSEQKMMAVRVHKI----GHNLPSKRDGKMILSQSC----------------------SEYPKFQTLG 211 (608)
Q Consensus 162 ----~~~~~~pF~s~~k~m~v~~~~~----~~~~~~kg~~~~~~~~~~----------------------~~~~~~~~~g 211 (608)
+...++||||++|+|+|.+.+. +..++.|||+|.++++|. +...+|+++|
T Consensus 460 ~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~g 539 (972)
T KOG0202|consen 460 SRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEG 539 (972)
T ss_pred HHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhcc
Confidence 4559999999999999998532 245799999999999773 2346789999
Q ss_pred CceEEEEEcc-------------------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Q psy16789 212 KGLVAMARGS-------------------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS 272 (608)
Q Consensus 212 ~r~l~~a~~~-------------------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~ 272 (608)
+|+|++|+++ .|+||+|+|++|+.||||+++.++|+.|+++||||+|+|||+.+||.+||+
T Consensus 540 LRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r 619 (972)
T KOG0202|consen 540 LRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAR 619 (972)
T ss_pred ceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH
Confidence 9999999983 267999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCC----ccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 273 MVGLDTIHG----KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 273 ~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
++|+...+. ..++|+++++++++++++...+..+|+|++|.+|.++|+.||+.|+.|+|||||.||+||||.||+|
T Consensus 620 ~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 620 EIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred HhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence 999987765 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHH
Q psy16789 349 IAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWIN 428 (608)
Q Consensus 349 ia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 428 (608)
||||.+|++++|+|||+|+.||||++|+.+++|||.+|.|+++|+.|+++.|+.++...+++..++.|.|++|+|+||+|
T Consensus 700 IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiN 779 (972)
T KOG0202|consen 700 IAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWIN 779 (972)
T ss_pred eeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc--ccccccc----------
Q psy16789 429 IIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMS--DNIVSKR---------- 496 (608)
Q Consensus 429 ~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---------- 496 (608)
+++|.+|+.+|+.+|++.++|++|||+.++++++.+.+++++..|++...++++.|.+.+. ++...++
T Consensus 780 lvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~ 859 (972)
T KOG0202|consen 780 LVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCR 859 (972)
T ss_pred eeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcc
Confidence 9999999999999999999999999999999999999999999999877666555544433 2222222
Q ss_pred --------------cchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhccccccccccccc
Q psy16789 497 --------------DTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEA 562 (608)
Q Consensus 497 --------------~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~ 562 (608)
..|++|..+++..++|.+++++...++|.+++|.|+|+.+++.++++++++++|+|+++..|.+.+
T Consensus 860 ~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~ 939 (972)
T KOG0202|consen 860 DFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEP 939 (972)
T ss_pred cccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecC
Confidence 238999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy16789 563 LTINDIAFLTALTSTVFFVSEIKKAIERICE 593 (608)
Q Consensus 563 l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~ 593 (608)
+++.+|++++.+++..++++|++|++.|++.
T Consensus 940 l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 940 LSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred CcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999999999999999999999764
No 2
>KOG0204|consensus
Probab=100.00 E-value=2.7e-89 Score=717.47 Aligned_cols=518 Identities=28% Similarity=0.455 Sum_probs=463.6
Q ss_pred HHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc-------c-------chhh-hh-------cc
Q psy16789 68 GMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL-------H-------RLLE-VG-------CV 125 (608)
Q Consensus 68 ~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~-------k-------g~~e-i~-------~l 125 (608)
+++..++.|.++...++.+...++.+..+++|.|||||+|.|.|.++-. | ..++ +. +.
T Consensus 408 sLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~ 487 (1034)
T KOG0204|consen 408 SLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQ 487 (1034)
T ss_pred HHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhh
Confidence 3444457889999999999999999999999999999999998877641 2 1221 11 12
Q ss_pred ccceeee-------ccccCCCccHHHHHHHHHHcCccc--cccccccceeeeCChHHHHHHhHhhhcCC--cCCCCchhH
Q psy16789 126 CNNASII-------GDSLLGQPTEGALLAAGMKFGLYA--VNEHYVRLKEYPFSSEQKMMAVRVHKIGH--NLPSKRDGK 194 (608)
Q Consensus 126 c~~a~~~-------~~~~~gdp~E~Al~~~~~~~~~~~--~~~~~~~~~~~pF~s~~k~m~v~~~~~~~--~~~~kg~~~ 194 (608)
.++..+. +.++.|+|||.||+.|+.+.|.+. .+.+.+..+.+||+|++|+|+++++.++. +.++||+.|
T Consensus 488 Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsE 567 (1034)
T KOG0204|consen 488 NTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASE 567 (1034)
T ss_pred cCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHH
Confidence 2222221 225789999999999999988754 56788899999999999999999974332 389999999
Q ss_pred HHHhhhh---------------------hhhHHHhhccCceEEEEEcc----------------CCCCceEEEEeeecCC
Q psy16789 195 MILSQSC---------------------SEYPKFQTLGKGLVAMARGS----------------NLQDLCYMGLVGICDP 237 (608)
Q Consensus 195 ~~~~~~~---------------------~~~~~~~~~g~r~l~~a~~~----------------~e~~l~~~G~~~~~d~ 237 (608)
.++.+|+ +.++.|+++|+|++|+||++ .+.+|+++|++|++||
T Consensus 568 iVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDP 647 (1034)
T KOG0204|consen 568 IVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDP 647 (1034)
T ss_pred HHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCC
Confidence 9988654 46789999999999999974 2478999999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.||+++++|+.|++|||.|.|+||||..||++||.+|||..+++ .+++|.+|+++++++++++++++.|++|.+|.||
T Consensus 648 vRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK 727 (1034)
T KOG0204|consen 648 VRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDK 727 (1034)
T ss_pred CCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchH
Confidence 99999999999999999999999999999999999999998877 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhh
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRF 395 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~ 395 (608)
..+|+.+++.|++|+++|||.||+|||++||||+|||..|+++||++||++++||||.+|+++++|||+.|.||+||++|
T Consensus 728 ~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQF 807 (1034)
T KOG0204|consen 728 HLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQF 807 (1034)
T ss_pred HHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHH
Q psy16789 396 QLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASI 475 (608)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~ 475 (608)
+++.|++++...+++++....+|++++|+||+|++||.+.+++||++||.+++|+|+|..++.+++++.||.+++.|+++
T Consensus 808 QLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~Y 887 (1034)
T KOG0204|consen 808 QLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVY 887 (1034)
T ss_pred EEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcc-----cccc--cccccchhhHHHHHHHHHHHHHHhhccc-cceeeeCCccchHHHHHHHHHHHHHHH
Q psy16789 476 IIVGTLYVFKREM-----SDNI--VSKRDTTMTFTCFVFFDMFNALSCRSQI-KSVFTIGLFTNKMFLFAVCASVVGQLF 547 (608)
Q Consensus 476 ~~~~~~~~~~~~~-----~~~~--~~~~~~t~~f~~lv~~~l~~~~~~~~~~-~~~f~~~~~~N~~~~~~~~~~i~~~~~ 547 (608)
+.+.++.+.+... .... .....+|+.|++|+++|+||.++.|..+ .++|+ ++++|++|+..+...+++|++
T Consensus 888 Ql~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFk-gi~~N~~F~~ii~~T~v~Qvi 966 (1034)
T KOG0204|consen 888 QLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFK-GIFRNRLFCVIITITVVSQVI 966 (1034)
T ss_pred HHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHH-HHhcCceEEEEeeeeeehhhh
Confidence 9988888766542 1111 1335679999999999999999999875 46777 899999999999999999999
Q ss_pred HhcccccccccccccCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 548 VIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAI 588 (608)
Q Consensus 548 ii~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~ 588 (608)
++.+ ++.+|+++++++.+|++|++++++.+++..+.|.+
T Consensus 967 IveF--~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 967 IVEF--GGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhhh--cCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 9988 57889999999999999999999999999999966
No 3
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=9.2e-83 Score=733.73 Aligned_cols=530 Identities=28% Similarity=0.434 Sum_probs=462.7
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc----------c----------c----
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL----------H----------R---- 118 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~----------k----------g---- 118 (608)
++++.++++|..+|.+++..+++++..++.+.++++|.|||||+|+|++.+..+ . |
T Consensus 327 ~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~ 406 (1053)
T TIGR01523 327 AVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSG 406 (1053)
T ss_pred HHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccc
Confidence 566777777888999999999999999999999999999999999998754311 0 0
Q ss_pred -------------------------------------------hhhhhccccceeeecc------ccCCCccHHHHHHHH
Q psy16789 119 -------------------------------------------LLEVGCVCNNASIIGD------SLLGQPTEGALLAAG 149 (608)
Q Consensus 119 -------------------------------------------~~ei~~lc~~a~~~~~------~~~gdp~E~Al~~~~ 149 (608)
..+.+.+||++....+ ...|||+|.||++++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a 486 (1053)
T TIGR01523 407 IPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFA 486 (1053)
T ss_pred ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHH
Confidence 0013578998776432 457999999999999
Q ss_pred HHcCccc--------c-------------------ccccccceeeeCChHHHHHHhHhhhc-C--CcCCCCchhHHHHhh
Q psy16789 150 MKFGLYA--------V-------------------NEHYVRLKEYPFSSEQKMMAVRVHKI-G--HNLPSKRDGKMILSQ 199 (608)
Q Consensus 150 ~~~~~~~--------~-------------------~~~~~~~~~~pF~s~~k~m~v~~~~~-~--~~~~~kg~~~~~~~~ 199 (608)
.+.|++. . ..+|+++.++||||++|||++++++. + ..+++||+++.+++.
T Consensus 487 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~ 566 (1053)
T TIGR01523 487 KKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIEC 566 (1053)
T ss_pred HHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHh
Confidence 9877631 0 23578899999999999999998753 2 346899999999987
Q ss_pred hhh----------------------hhHHHhhccCceEEEEEcc--------------------CCCCceEEEEeeecCC
Q psy16789 200 SCS----------------------EYPKFQTLGKGLVAMARGS--------------------NLQDLCYMGLVGICDP 237 (608)
Q Consensus 200 ~~~----------------------~~~~~~~~g~r~l~~a~~~--------------------~e~~l~~~G~~~~~d~ 237 (608)
|.. ..++|+++|+|||++|||+ .|+||+|+|+++++||
T Consensus 567 c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp 646 (1053)
T TIGR01523 567 CSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDP 646 (1053)
T ss_pred hhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecC
Confidence 742 3567999999999999983 2579999999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----------CCccccchhhcccCHHHHHHHhhcceEE
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----------HGKVLSGDQIDQMTEHQLQQVVNSVTVF 307 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----------~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 307 (608)
+|++++++|++|+++||+++|+|||++.||.++|+++||... ...+++|.+++.++++++.+...+..||
T Consensus 647 ~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ 726 (1053)
T TIGR01523 647 PRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVI 726 (1053)
T ss_pred CchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEE
Confidence 999999999999999999999999999999999999999754 3479999999999999999999999999
Q ss_pred EEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHH
Q psy16789 308 YRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFY 387 (608)
Q Consensus 308 ~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~ 387 (608)
+|++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|++.++++||+++.+++|.++.+++++||++|+
T Consensus 727 ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ 806 (1053)
T TIGR01523 727 ARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFD 806 (1053)
T ss_pred EecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhc----C-CCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcc
Q psy16789 388 NIRNFVRFQLSTSIAALSLIALATLLR----I-PNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMIT 462 (608)
Q Consensus 388 ~i~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~ 462 (608)
|+++++.|.+++|+..+++.+++.+++ . +.||+|+|+||+|+++|.+|+++++++||++++|++||++++.++++
T Consensus 807 ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~ 886 (1053)
T TIGR01523 807 NIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQ 886 (1053)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccC
Confidence 999999999999999998888888873 3 47999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhc---cccc--------------ccccccchhhHHHHHHHHHHHHHHhhccccceee
Q psy16789 463 RALVVNVLMSASIIIVGTLYVFKRE---MSDN--------------IVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFT 525 (608)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------~~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~ 525 (608)
+.++..++..|++.++..+..|++. +..+ .....++|++|.+++++|+++.+++|+.+.++|+
T Consensus 887 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~ 966 (1053)
T TIGR01523 887 KELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFN 966 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhh
Confidence 9999888888887766655554321 1000 0122468999999999999999999998888876
Q ss_pred eC---------------CccchHHHHHHHHHHHHHHHHhccccccc-ccccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 526 IG---------------LFTNKMFLFAVCASVVGQLFVIYFPPLQK-VFQTEALTINDIAFLTALTSTVFFVSEIKKAIE 589 (608)
Q Consensus 526 ~~---------------~~~N~~~~~~~~~~i~~~~~ii~~p~l~~-~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~ 589 (608)
.+ .++|++++++++++++++++++|+|+++. +|++.|+++ .|+++++++++.++++|++|+++
T Consensus 967 ~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~ 1045 (1053)
T TIGR01523 967 LHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGK 1045 (1053)
T ss_pred cCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 67999999999999999999999999986 999999996 89999999999999999999987
Q ss_pred Hhhh
Q psy16789 590 RICE 593 (608)
Q Consensus 590 r~~~ 593 (608)
|+.+
T Consensus 1046 r~~~ 1049 (1053)
T TIGR01523 1046 RRLF 1049 (1053)
T ss_pred Hhcc
Confidence 6654
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-82 Score=722.22 Aligned_cols=517 Identities=32% Similarity=0.508 Sum_probs=453.5
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccch--------------------hhh
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRL--------------------LEV 122 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~--------------------~ei 122 (608)
+.++.++..|..++.+++..++++|..++.++++++|.|||||+|||++.+..+.-. ...
T Consensus 316 ~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 395 (917)
T COG0474 316 AVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLA 395 (917)
T ss_pred HHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHH
Confidence 556677777778999999999999999999999999999999999999877543211 114
Q ss_pred hccccceeeec--cccCCCccHHHHHHHHHHcCc--cc--cccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhH
Q psy16789 123 GCVCNNASIIG--DSLLGQPTEGALLAAGMKFGL--YA--VNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGK 194 (608)
Q Consensus 123 ~~lc~~a~~~~--~~~~gdp~E~Al~~~~~~~~~--~~--~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~ 194 (608)
+++||++.... +...|||+|.||++++.+.|. .. ...+|++++++||||+||||+++++... ...++|||++
T Consensus 396 ~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe 475 (917)
T COG0474 396 AALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPE 475 (917)
T ss_pred HHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChH
Confidence 56999877654 556899999999999999876 33 4456678999999999999999997433 4569999999
Q ss_pred HHHhhh-----------------hhhhHHHhhccCceEEEEEc------------cCCCCceEEEEeeecCCCChhHHHH
Q psy16789 195 MILSQS-----------------CSEYPKFQTLGKGLVAMARG------------SNLQDLCYMGLVGICDPPRPHVREC 245 (608)
Q Consensus 195 ~~~~~~-----------------~~~~~~~~~~g~r~l~~a~~------------~~e~~l~~~G~~~~~d~~r~~~~~~ 245 (608)
.+++.| ++..++|+++|+||+++||| ..|+||+|+|+++++||||++++++
T Consensus 476 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~a 555 (917)
T COG0474 476 VILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEA 555 (917)
T ss_pred HHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHH
Confidence 998544 34568899999999999997 3578999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 246 MSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 246 I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
|+.|+++||++||+||||..||++||++||+..+.. .+++|++++.++++++.+.+.++.||||++|+||.++|+.+|
T Consensus 556 I~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq 635 (917)
T COG0474 556 IEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQ 635 (917)
T ss_pred HHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999988874 499999999999999999999999999999999999999999
Q ss_pred HCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHH
Q psy16789 324 ANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAA 403 (608)
Q Consensus 324 ~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~ 403 (608)
+.|+.|+|||||.||+||||+|||||||+++|++++|++||+++.+++|..+..+++|||++|.|+++++.|.+++|+..
T Consensus 636 ~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~ 715 (917)
T COG0474 636 KSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGE 715 (917)
T ss_pred hCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-CchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHH-HHHHHHHH
Q psy16789 404 LSLIALATLLRIP-NPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSA-SIIIVGTL 481 (608)
Q Consensus 404 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ 481 (608)
++..+++.+++.+ .|++++|++|+|+++|.+|+++++.++|+.+.|++||++++.++++++.++.++... ...++..+
T Consensus 716 ~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~ 795 (917)
T COG0474 716 VLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFI 795 (917)
T ss_pred HHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHH
Confidence 9888888888777 899999999999999999999999999999999999999999999999999965554 44333333
Q ss_pred Hhhhhcccccc--------cccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccc
Q psy16789 482 YVFKREMSDNI--------VSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPP 553 (608)
Q Consensus 482 ~~~~~~~~~~~--------~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~ 553 (608)
+.|...+.... .....+|+.|..+++++.++.+.+++...+++...++.|+.++++++++.++++++.++|+
T Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~ 875 (917)
T COG0474 796 LTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPP 875 (917)
T ss_pred HHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHH
Confidence 33322221110 1445789999999999999999999988888888888999999999999999999999998
Q ss_pred cc-cccccccCChhHHHHHHHHHHHHH
Q psy16789 554 LQ-KVFQTEALTINDIAFLTALTSTVF 579 (608)
Q Consensus 554 l~-~~f~~~~l~~~~w~~~~~~~~~~~ 579 (608)
+. ..|...+++...|+++++......
T Consensus 876 ~~~~~f~~~~~~~~~~~~~~~~~~~~~ 902 (917)
T COG0474 876 LNLKIFQPTPLSLFEWLIAIAVALLLL 902 (917)
T ss_pred hHhhhccCCCCcHHHHHHHHHHHHHHH
Confidence 88 789999999888888777764443
No 5
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.3e-80 Score=710.32 Aligned_cols=527 Identities=52% Similarity=0.836 Sum_probs=473.4
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cc------------------------
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HR------------------------ 118 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg------------------------ 118 (608)
..+...|..++.++...++..+..++.+.++++|.|||||+|+|++.+..+ .+
T Consensus 295 t~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (884)
T TIGR01522 295 TVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLH 374 (884)
T ss_pred HHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccc
Confidence 345555667888899999999999999999999999999999998765322 11
Q ss_pred ------hhh---hhccccceeeec--cccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhh---cC
Q psy16789 119 ------LLE---VGCVCNNASIIG--DSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHK---IG 184 (608)
Q Consensus 119 ------~~e---i~~lc~~a~~~~--~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~---~~ 184 (608)
..+ ..++||++.... ++..|||+|.|+++++.+.++...+..|+.++++||+|++|+|+++++. +.
T Consensus 375 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~ 454 (884)
T TIGR01522 375 GFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRS 454 (884)
T ss_pred cccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCe
Confidence 012 347788876533 3567999999999999988776555678899999999999999998764 23
Q ss_pred CcCCCCchhHHHHhhhh---------------------hhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHH
Q psy16789 185 HNLPSKRDGKMILSQSC---------------------SEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVR 243 (608)
Q Consensus 185 ~~~~~kg~~~~~~~~~~---------------------~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~ 243 (608)
...+.||+++.+++.|. +..++++++|+|++++||++.+++|+|+|+++++||+|++++
T Consensus 455 ~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~ 534 (884)
T TIGR01522 455 EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVK 534 (884)
T ss_pred EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHH
Confidence 34689999998887653 234568899999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
++|++|+++|++++|+|||+..||.++|+++|+......+++|++++.++++++.+.+.+..+|+|++|+||.++|+.+|
T Consensus 535 ~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq 614 (884)
T TIGR01522 535 EAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQ 614 (884)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred HCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHH
Q psy16789 324 ANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAA 403 (608)
Q Consensus 324 ~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~ 403 (608)
+.|+.|+|+|||.||+||+++|||||+||.++++.++++||+++.+++|..+.+++++||++|+|+++++.|.++.|+..
T Consensus 615 ~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~ 694 (884)
T TIGR01522 615 KRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAA 694 (884)
T ss_pred HCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 99999999999999999999999999998679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHh
Q psy16789 404 LSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYV 483 (608)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 483 (608)
+.+.+++.+++.+.|++++|++|+|+++|.+|+++++++||++++|++||++++++++++.++..++++|+++.++.++.
T Consensus 695 ~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 774 (884)
T TIGR01522 695 LSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFV 774 (884)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999888777766
Q ss_pred hhhcccccccccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccC
Q psy16789 484 FKREMSDNIVSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEAL 563 (608)
Q Consensus 484 ~~~~~~~~~~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l 563 (608)
|+..+..+.....++|++|.+++++|++|.+++|+.+.++|+.++++|++++++++++++++++++|+|+++.+|++.|+
T Consensus 775 ~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l 854 (884)
T TIGR01522 775 FVREMQDGVITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEAL 854 (884)
T ss_pred HHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 66544333223456899999999999999999999888889888899999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy16789 564 TINDIAFLTALTSTVFFVSEIKKAIERIC 592 (608)
Q Consensus 564 ~~~~w~~~~~~~~~~~~~~~l~K~~~r~~ 592 (608)
++.+|+++++++++.++++|++|+++|++
T Consensus 855 ~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 855 SIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999887654
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=6.8e-80 Score=712.24 Aligned_cols=535 Identities=28% Similarity=0.428 Sum_probs=459.5
Q ss_pred HHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---------cc-----------------
Q psy16789 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---------HR----------------- 118 (608)
Q Consensus 65 l~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---------kg----------------- 118 (608)
+..+...+..++.++...+++.+..++.+.++++|.|||||+|+|++.+..+ .+
T Consensus 314 v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (997)
T TIGR01106 314 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWL 393 (997)
T ss_pred HHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHH
Confidence 3334444556788889999999999999999999999999999998776421 10
Q ss_pred -hhhhhccccceeeecc---------ccCCCccHHHHHHHHHHcCcc--ccccccccceeeeCChHHHHHHhHhhhc---
Q psy16789 119 -LLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGLY--AVNEHYVRLKEYPFSSEQKMMAVRVHKI--- 183 (608)
Q Consensus 119 -~~ei~~lc~~a~~~~~---------~~~gdp~E~Al~~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~--- 183 (608)
..+++++||++....+ ...|||+|.||++++.+.+.+ ..+++|+.+.++||||+||+|++++...
T Consensus 394 ~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~ 473 (997)
T TIGR01106 394 ALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPR 473 (997)
T ss_pred HHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCC
Confidence 1125688998765322 357999999999999875432 2456788999999999999999876421
Q ss_pred --CCcCCCCchhHHHHhhhh--------------------hhhHHHhhccCceEEEEEccC-------------------
Q psy16789 184 --GHNLPSKRDGKMILSQSC--------------------SEYPKFQTLGKGLVAMARGSN------------------- 222 (608)
Q Consensus 184 --~~~~~~kg~~~~~~~~~~--------------------~~~~~~~~~g~r~l~~a~~~~------------------- 222 (608)
...++.||+++.+++.|. +.+++++++|+||+++||++.
T Consensus 474 ~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~ 553 (997)
T TIGR01106 474 DPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFP 553 (997)
T ss_pred CceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhcc
Confidence 234589999999988763 235679999999999999731
Q ss_pred CCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC----------------------
Q psy16789 223 LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH---------------------- 280 (608)
Q Consensus 223 e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~---------------------- 280 (608)
|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+..++
T Consensus 554 e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~ 633 (997)
T TIGR01106 554 TDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRD 633 (997)
T ss_pred ccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhcccccccccccc
Confidence 6799999999999999999999999999999999999999999999999999996542
Q ss_pred --CccccchhhcccCHHHHHHHhhcce--EEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc
Q psy16789 281 --GKVLSGDQIDQMTEHQLQQVVNSVT--VFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGT 356 (608)
Q Consensus 281 --~~vi~g~~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~ 356 (608)
..+++|.+++.++++++.+.+.++. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|+
T Consensus 634 ~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~ 713 (997)
T TIGR01106 634 AKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGS 713 (997)
T ss_pred ccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCccc
Confidence 2589999999999999999998764 999999999999999999999999999999999999999999999997799
Q ss_pred HHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhH
Q psy16789 357 DVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPA 436 (608)
Q Consensus 357 ~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 436 (608)
+.++++||+++.+++|.+++++++|||++|.|+++++.|.++.|+..+++.+++.+++.++|++++|++|+|+++|.+|+
T Consensus 714 ~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~ 793 (997)
T TIGR01106 714 DVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPA 793 (997)
T ss_pred HHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCccccccCCCCC-CCCCcchHHHHHHH-HHHHHHHHHHHHhhhhccc----------c-----c-----c--
Q psy16789 437 QSLGVEPVDDDVKIQKPRNV-KEPMITRALVVNVL-MSASIIIVGTLYVFKREMS----------D-----N-----I-- 492 (608)
Q Consensus 437 ~~l~~~~~~~~~~~~~P~~~-~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~-----~-----~-- 492 (608)
++++++||++++|++||+++ ..+++++.++..++ ..|+++++..++.++..+. . . .
T Consensus 794 ~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 873 (997)
T TIGR01106 794 ISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLE 873 (997)
T ss_pred HHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccc
Confidence 99999999999999999985 67899988776643 3455555444443322110 0 0 0
Q ss_pred -c-------------ccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhccccccccc
Q psy16789 493 -V-------------SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVF 558 (608)
Q Consensus 493 -~-------------~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f 558 (608)
. ....+|+.|.+++++|+++++++|+.+.++|+.+ +.|++++.++++.++++++++|+|+++.+|
T Consensus 874 ~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~-~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f 952 (997)
T TIGR01106 874 DSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQG-MKNKILIFGLFEETALAAFLSYCPGMGVAL 952 (997)
T ss_pred cccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccC-CcCHHHHHHHHHHHHHHHHHHHhhhhHHHh
Confidence 0 0135899999999999999999999888888867 799999999999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy16789 559 QTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRSS 600 (608)
Q Consensus 559 ~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~~~~~ 600 (608)
++.|+++.+|+++++++++.+++.++.|++.|+++++|+++.
T Consensus 953 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~~~~~~~~~ 994 (997)
T TIGR01106 953 RMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRNPGGWVEKE 994 (997)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchhhHh
Confidence 999999999999999999999999999999998877777764
No 7
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=9.9e-80 Score=706.49 Aligned_cols=525 Identities=33% Similarity=0.532 Sum_probs=462.1
Q ss_pred HHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--c-------------c-----------
Q psy16789 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--H-------------R----------- 118 (608)
Q Consensus 65 l~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--k-------------g----------- 118 (608)
+..+...|..++.++...++..+..++.+.++++|.|||||+|+|++.+..+ . +
T Consensus 259 vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (917)
T TIGR01116 259 ITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIK 338 (917)
T ss_pred HHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccc
Confidence 3445555667888899999999999999999999999999999988765322 0 0
Q ss_pred -----------hhh----hhccccceeeecc------ccCCCccHHHHHHHHHHcCcccc------------------cc
Q psy16789 119 -----------LLE----VGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLYAV------------------NE 159 (608)
Q Consensus 119 -----------~~e----i~~lc~~a~~~~~------~~~gdp~E~Al~~~~~~~~~~~~------------------~~ 159 (608)
..+ ++++||++....+ ...|||+|.||++++.+.|++.. ++
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 418 (917)
T TIGR01116 339 DDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWND 418 (917)
T ss_pred cCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHh
Confidence 011 4678998876432 24699999999999998775421 34
Q ss_pred ccccceeeeCChHHHHHHhHhhhc-CCcCCCCchhHHHHhhhh---------------------hhhHHHhh-ccCceEE
Q psy16789 160 HYVRLKEYPFSSEQKMMAVRVHKI-GHNLPSKRDGKMILSQSC---------------------SEYPKFQT-LGKGLVA 216 (608)
Q Consensus 160 ~~~~~~~~pF~s~~k~m~v~~~~~-~~~~~~kg~~~~~~~~~~---------------------~~~~~~~~-~g~r~l~ 216 (608)
+|++++++||||+||||++++++. +..++.||+++.+++.|. +.+++|++ +|+||++
T Consensus 419 ~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~ 498 (917)
T TIGR01116 419 KFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLA 498 (917)
T ss_pred hcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 577899999999999999998753 344689999999988663 23567899 9999999
Q ss_pred EEEccC------------------CCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 217 MARGSN------------------LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 217 ~a~~~~------------------e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
+|||+. |+||+|+|+++++||+|++++++|++|+++|++++|+|||+..||.++|+++|+..
T Consensus 499 ~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 499 LAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFS 578 (917)
T ss_pred EEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCC
Confidence 999853 67999999999999999999999999999999999999999999999999999976
Q ss_pred CCC----ccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCC
Q psy16789 279 IHG----KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQ 354 (608)
Q Consensus 279 ~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~ 354 (608)
++. ..++|++++.+++++..+...+..||+|++|+||.++|+.+|+.|++|+|+|||.||++|+++|||||+|+ +
T Consensus 579 ~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~ 657 (917)
T TIGR01116 579 PDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-S 657 (917)
T ss_pred CCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-C
Confidence 543 46899999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred CcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhh
Q psy16789 355 GTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGP 434 (608)
Q Consensus 355 ~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 434 (608)
|++.+|++||+++.+++|..+.++++|||++|.|+++++.|.+++|+..++..+++.+++.+.||+++|++|+|+++|.+
T Consensus 658 g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~l 737 (917)
T TIGR01116 658 GTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGL 737 (917)
T ss_pred CcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred hHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc-c---------------c------
Q psy16789 435 PAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSD-N---------------I------ 492 (608)
Q Consensus 435 ~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~------ 492 (608)
|++++++++|++++|++||++++++++++++++.|+++|++++++++..|.+.+.. + .
T Consensus 738 p~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (917)
T TIGR01116 738 PATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYV 817 (917)
T ss_pred HHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999988876644443321110 0 0
Q ss_pred --cccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChhHHHH
Q psy16789 493 --VSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAF 570 (608)
Q Consensus 493 --~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~~w~~ 570 (608)
....++|++|.+++++|++|.+++|+.+.++|+.++++|++++++++++++++++++|+|+++..|++.|+++.+|++
T Consensus 818 ~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~ 897 (917)
T TIGR01116 818 FEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLM 897 (917)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHH
Confidence 123467999999999999999999998888898888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy16789 571 LTALTSTVFFVSEIKKAIER 590 (608)
Q Consensus 571 ~~~~~~~~~~~~~l~K~~~r 590 (608)
+++++++.++++|+.|+++|
T Consensus 898 ~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 898 VLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998763
No 8
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=6.5e-78 Score=694.08 Aligned_cols=519 Identities=28% Similarity=0.429 Sum_probs=451.9
Q ss_pred HHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc--cc---------------hhh---hhccc
Q psy16789 67 AGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--HR---------------LLE---VGCVC 126 (608)
Q Consensus 67 ~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--kg---------------~~e---i~~lc 126 (608)
.+...+..++.++...++..+..++.+.++++|.|||||+|+|++.+..+ .+ ..+ ....|
T Consensus 348 i~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (941)
T TIGR01517 348 IALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISL 427 (941)
T ss_pred HHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHh
Confidence 34444556788889999999999999999999999999999998765322 11 011 12334
Q ss_pred cceee-ec-----cccCCCccHHHHHHHHHHcCccc--cccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHH
Q psy16789 127 NNASI-IG-----DSLLGQPTEGALLAAGMKFGLYA--VNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMI 196 (608)
Q Consensus 127 ~~a~~-~~-----~~~~gdp~E~Al~~~~~~~~~~~--~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~ 196 (608)
|+... .. ....|||+|.|+++++.+.+.+. .+.+|+.++++||+|++|+|+++++..+ ...+.||+++.+
T Consensus 428 ~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~i 507 (941)
T TIGR01517 428 NSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIV 507 (941)
T ss_pred CCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHH
Confidence 44332 21 14679999999999998876543 3356788899999999999999987543 346899999988
Q ss_pred Hhhhh--------------------hhhHHHhhccCceEEEEEccC-----------CCCceEEEEeeecCCCChhHHHH
Q psy16789 197 LSQSC--------------------SEYPKFQTLGKGLVAMARGSN-----------LQDLCYMGLVGICDPPRPHVREC 245 (608)
Q Consensus 197 ~~~~~--------------------~~~~~~~~~g~r~l~~a~~~~-----------e~~l~~~G~~~~~d~~r~~~~~~ 245 (608)
++.|. +.+++++++|+||+++||++. |+||+|+|+++++||+|++++++
T Consensus 508 l~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~a 587 (941)
T TIGR01517 508 LKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREA 587 (941)
T ss_pred HHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHH
Confidence 87654 234678999999999999863 68999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHC
Q psy16789 246 MSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN 325 (608)
Q Consensus 246 I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~ 325 (608)
|++|+++||+++|+|||++.||.++|+++|+..++..+++|++++.++++++.+.+.+..+|||++|+||.++|+.+|+.
T Consensus 588 I~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~ 667 (941)
T TIGR01517 588 VQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDM 667 (941)
T ss_pred HHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999888889999999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHH
Q psy16789 326 GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALS 405 (608)
Q Consensus 326 g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~ 405 (608)
|++|+|+|||.||+|||++||||||||.+|++.|+++||+++.+++|.++.+++++||++|.|+++++.|.+++|+..+.
T Consensus 668 g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~ 747 (941)
T TIGR01517 668 GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVI 747 (941)
T ss_pred CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhh
Q psy16789 406 LIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFK 485 (608)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (608)
+.+++.+++.++|++++|++|+|+++|.+|++++++++|++++|++||++++.+++++.++.+++.+|+++.+..+.+++
T Consensus 748 ~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~ 827 (941)
T TIGR01517 748 LTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLF 827 (941)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888889999999999999999999999999999999999999999999999999999999999887776665554
Q ss_pred hcc-----ccc-----ccccccchhhHHHHHHHHHHHHHHhhcccc-ceeeeCCccchHHHHHHHHHHHHHHHHhccccc
Q psy16789 486 REM-----SDN-----IVSKRDTTMTFTCFVFFDMFNALSCRSQIK-SVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPL 554 (608)
Q Consensus 486 ~~~-----~~~-----~~~~~~~t~~f~~lv~~~l~~~~~~~~~~~-~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l 554 (608)
... ... ......+|+.|.+++++|+++.+++|+.+. ++|+ ++++|++++.+++++++++++++ |++
T Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~l~~~~~--~~~ 904 (941)
T TIGR01517 828 AGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFE-GLFKNRIFVTIMGFTFGFQVIIV--EFG 904 (941)
T ss_pred HHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccc-cccccHHHHHHHHHHHHHHHHHH--HHH
Confidence 321 110 012457899999999999999999999764 5666 88899999999998888886555 457
Q ss_pred ccccccccCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 555 QKVFQTEALTINDIAFLTALTSTVFFVSEIKKAI 588 (608)
Q Consensus 555 ~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~ 588 (608)
+.+|++.|+++.+|+++++++++.+++.++.|.+
T Consensus 905 ~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 905 GSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999976
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.4e-76 Score=675.30 Aligned_cols=515 Identities=23% Similarity=0.278 Sum_probs=433.2
Q ss_pred HHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cch--hhhh---ccccceeeecccc
Q psy16789 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRL--LEVG---CVCNNASIIGDSL 136 (608)
Q Consensus 65 l~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~--~ei~---~lc~~a~~~~~~~ 136 (608)
+..+...|..++.++...+++++.-++.+.++++|.|||||+|+|++.+... .|. .+++ .+|+. ....
T Consensus 339 vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~----~~~~ 414 (903)
T PRK15122 339 VSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSF----HQSG 414 (903)
T ss_pred HHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCC----CCCC
Confidence 3445555666788899999999999999999999999999999998876543 332 1222 22211 1233
Q ss_pred CCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhh--cCCcCCCCchhHHHHhhhh-------------
Q psy16789 137 LGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHK--IGHNLPSKRDGKMILSQSC------------- 201 (608)
Q Consensus 137 ~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~--~~~~~~~kg~~~~~~~~~~------------- 201 (608)
.|||+|.|+++++.+.+......+|+...++||++.+|+|++++++ +....+.||+++.+++.|.
T Consensus 415 ~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 494 (903)
T PRK15122 415 MKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDE 494 (903)
T ss_pred CCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCH
Confidence 6899999999999987654444568889999999999999998764 2344689999998887653
Q ss_pred -------hhhHHHhhccCceEEEEEcc-------------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcC
Q psy16789 202 -------SEYPKFQTLGKGLVAMARGS-------------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTG 261 (608)
Q Consensus 202 -------~~~~~~~~~g~r~l~~a~~~-------------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TG 261 (608)
+..++++++|+|++++||++ .|+||+|+|+++++||+|++++++|++|+++||+++|+||
T Consensus 495 ~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTG 574 (903)
T PRK15122 495 ARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTG 574 (903)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECC
Confidence 23567899999999999974 3678999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHH
Q psy16789 262 DGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVA 341 (608)
Q Consensus 262 d~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~a 341 (608)
|++.||.++|+++||.. +.+++|.+++.++++++.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+||
T Consensus 575 D~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPA 652 (903)
T PRK15122 575 DNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPA 652 (903)
T ss_pred CCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHH
Confidence 99999999999999963 4699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhH
Q psy16789 342 LKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNA 421 (608)
Q Consensus 342 l~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (608)
|++|||||||+ +|++.||++||+++.+++|.++++++++||++|+|+++++.|.++.|+..++..+++.++..+.|++|
T Consensus 653 Lk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~ 731 (903)
T PRK15122 653 LRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLA 731 (903)
T ss_pred HHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHH
Confidence 99999999999 99999999999999999999999999999999999999999999999998888777777766689999
Q ss_pred HHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccc--cccch
Q psy16789 422 MQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS--KRDTT 499 (608)
Q Consensus 422 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t 499 (608)
.|+||+|+++|. |++++++|||++++| +||++++.+++++.++...+..+++ .++.++++++.+..+... ...+|
T Consensus 732 ~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~t 808 (903)
T PRK15122 732 IHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSIF-DITTFALMWFVFAANSVEMQALFQS 808 (903)
T ss_pred HHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhccCcHhhhhhhHH
Confidence 999999999996 899999999999999 9999999999998777544433333 333333322221111101 12347
Q ss_pred hhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccc--cccccccccCChhHHHHHHHHHHH
Q psy16789 500 MTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPP--LQKVFQTEALTINDIAFLTALTST 577 (608)
Q Consensus 500 ~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~--l~~~f~~~~l~~~~w~~~~~~~~~ 577 (608)
..|.+++++|+++++++|+.+. ++|.|++.+..+.++++++++++|+|+ ++.+|++.|+++.+|++++++++.
T Consensus 809 ~~f~~l~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~ 883 (903)
T PRK15122 809 GWFIEGLLSQTLVVHMLRTQKI-----PFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLG 883 (903)
T ss_pred HHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 7899999999999999999754 345677777788888889999999996 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q psy16789 578 VFFVSEIKKAIERICER 594 (608)
Q Consensus 578 ~~~~~~l~K~~~r~~~~ 594 (608)
.+++.++.|.+..+..+
T Consensus 884 ~~~~~e~~k~~~~r~~~ 900 (903)
T PRK15122 884 YCLVAQGMKRFYIRRFG 900 (903)
T ss_pred HHHHHHHHHHHHhhhcc
Confidence 99999999965554443
No 10
>KOG0203|consensus
Probab=100.00 E-value=1.2e-77 Score=629.01 Aligned_cols=514 Identities=29% Similarity=0.449 Sum_probs=454.6
Q ss_pred CCCchHHHHHHHHhhhhhceeeeCC---------ccccCchHHHHHHHHHhc-C-chhhhhhccccccccccccccccee
Q psy16789 29 IRSKPETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKF-G-LYAVNEHYVRLKEYPFSSEQKMMAV 97 (608)
Q Consensus 29 ~~~~~~~~~ll~~~~l~n~a~~~~~---------~~~G~pte~All~~~~~~-g-~~~~~~~~~~v~~~pF~s~~k~m~v 97 (608)
...++.+.++++++++||.|.+..+ ...||+.|.||+.++... | ...+|++++.+.++||+|++|+...
T Consensus 408 ~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqls 487 (1019)
T KOG0203|consen 408 DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLS 487 (1019)
T ss_pred cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEE
Confidence 4456788899999999999998754 357999999999999755 3 3689999999999999999999999
Q ss_pred eecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHH
Q psy16789 98 RCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMM 176 (608)
Q Consensus 98 ~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m 176 (608)
++..++.. +...++.+||++| ++..|++-.+ ...+.|.|.+.+..
T Consensus 488 ih~~~d~~---~~~~~l~mKGape~il~~CSTi~i-------------------------------~g~e~pld~~~~~~ 533 (1019)
T KOG0203|consen 488 IHETEDPS---DPRFLLVMKGAPERILDRCSTILI-------------------------------NGEEKPLDEKLKEA 533 (1019)
T ss_pred EEecCCCC---CccceeeecCChHHHHhhccceee-------------------------------cCCCCCcCHHHHHH
Confidence 88765432 4567889999999 9999998322 23345555554443
Q ss_pred HhHhhhcCCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEcc-------------------CCCCceEEEEeeecCC
Q psy16789 177 AVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGS-------------------NLQDLCYMGLVGICDP 237 (608)
Q Consensus 177 ~v~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~-------------------~e~~l~~~G~~~~~d~ 237 (608)
. ++.+.++...|.||+++|++. ...+|.|+|++++-||
T Consensus 534 f-----------------------~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idP 590 (1019)
T KOG0203|consen 534 F-----------------------QEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDP 590 (1019)
T ss_pred H-----------------------HHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCC
Confidence 3 336677778888888877651 2478999999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC------------------------CCccccchhhcccC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI------------------------HGKVLSGDQIDQMT 293 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~------------------------~~~vi~g~~~~~~~ 293 (608)
||..+|+++.+|++|||+++|+|||++.||+++|++.||... ...|++|.++.+++
T Consensus 591 PR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~ 670 (1019)
T KOG0203|consen 591 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMS 670 (1019)
T ss_pred CcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccC
Confidence 999999999999999999999999999999999999997432 14578999999999
Q ss_pred HHHHHHHhhcc--eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC
Q psy16789 294 EHQLQQVVNSV--TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD 371 (608)
Q Consensus 294 ~~~~~~~~~~~--~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~ 371 (608)
.+++++++.+. .||||.||+||..||+.||+.|..|+++|||.||+||+|+||||||||..|++++|++||+++.|+|
T Consensus 671 ~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDN 750 (1019)
T KOG0203|consen 671 SEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 750 (1019)
T ss_pred HHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCc
Confidence 99999999875 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCcccccc
Q psy16789 372 FNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQ 451 (608)
Q Consensus 372 ~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 451 (608)
|.+|+..+++||.+|+|++|.+.|.+++|+..+.+.+++.+++.|.|+.++++|.+++.+|.+|+++|+||+|+.++|++
T Consensus 751 FASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r 830 (1019)
T KOG0203|consen 751 FASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLR 830 (1019)
T ss_pred chhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCCCCcchHHHHH-HHHHHHHHHHHHHHhhhhccccccccc----------------------------------
Q psy16789 452 KPRN-VKEPMITRALVVN-VLMSASIIIVGTLYVFKREMSDNIVSK---------------------------------- 495 (608)
Q Consensus 452 ~P~~-~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 495 (608)
+||+ +++.++|.+.+.. +...|.+++++.|+.|+..+..++..|
T Consensus 831 ~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~l 910 (1019)
T KOG0203|consen 831 PPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYL 910 (1019)
T ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHH
Confidence 9998 6789999887665 666788998888888776543332211
Q ss_pred --ccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChhHHHHHHH
Q psy16789 496 --RDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTINDIAFLTA 573 (608)
Q Consensus 496 --~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~~w~~~~~ 573 (608)
..+|..|.+++.+|++.++.+++++.++|+++ ++||.+++++++-+++..++.|.|++...+++.|+.+.+|+..+.
T Consensus 911 e~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqG-mrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P 989 (1019)
T KOG0203|consen 911 EYTCYTAFFISIVVVQWADLIICKTRRNSIFQQG-MRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFP 989 (1019)
T ss_pred HHhhhhheeeeehHHhHhhHHhhhcchhHHHHhh-hhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEeccc
Confidence 13577789999999999999999999999988 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhc
Q psy16789 574 LTSTVFFVSEIKKAIERICERKCLRSS 600 (608)
Q Consensus 574 ~~~~~~~~~~l~K~~~r~~~~~~~~~~ 600 (608)
++++.++.+|+.|++.|+++..|.++-
T Consensus 990 ~~ilIfvydE~Rk~~IR~~P~gw~e~e 1016 (1019)
T KOG0203|consen 990 FGILIFVYDEVRKLFIRRYPGGWLEKE 1016 (1019)
T ss_pred ceeeeeeHHHHHhHhhhhCCCchhhhh
Confidence 999999999999999999999998863
No 11
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=7.8e-74 Score=651.78 Aligned_cols=512 Identities=22% Similarity=0.294 Sum_probs=414.6
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cch--hhhh---ccccceeeeccccC
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRL--LEVG---CVCNNASIIGDSLL 137 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~--~ei~---~lc~~a~~~~~~~~ 137 (608)
..+...|..++.++...+++++..++.+.++++|.|||||+|+|++.+... .|. .+++ .+|+. . +...
T Consensus 342 t~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~--~--~~~~ 417 (902)
T PRK10517 342 TSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSH--Y--QTGL 417 (902)
T ss_pred HHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCC--c--CCCC
Confidence 344455666788999999999999999999999999999999999877543 222 2222 22221 1 1236
Q ss_pred CCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhc--CCcCCCCchhHHHHhhhh--------------
Q psy16789 138 GQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKI--GHNLPSKRDGKMILSQSC-------------- 201 (608)
Q Consensus 138 gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~--~~~~~~kg~~~~~~~~~~-------------- 201 (608)
|||+|.|+++++++.+.....+.|+...++|||+++|+|++++++. .+..++||+++.+++.|.
T Consensus 418 ~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 497 (902)
T PRK10517 418 KNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDI 497 (902)
T ss_pred CCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHH
Confidence 9999999999988754333445788899999999999999987532 244689999998887653
Q ss_pred ------hhhHHHhhccCceEEEEEcc-----------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcH
Q psy16789 202 ------SEYPKFQTLGKGLVAMARGS-----------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQ 264 (608)
Q Consensus 202 ------~~~~~~~~~g~r~l~~a~~~-----------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~ 264 (608)
+..++++++|+||+++||++ .|+|++|+|+++++||+|++++++|++|+++||+++|+|||++
T Consensus 498 ~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~ 577 (902)
T PRK10517 498 MLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSE 577 (902)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 22467899999999999974 3679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHh
Q psy16789 265 ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 265 ~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~ 344 (608)
.||.++|+++||. .+.+++|.+++.++++++.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++
T Consensus 578 ~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ 655 (902)
T PRK10517 578 LVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRA 655 (902)
T ss_pred HHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHh
Confidence 9999999999995 35699999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHH
Q psy16789 345 ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424 (608)
Q Consensus 345 A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (608)
|||||||+ +|++.||++||+++.+++|.++.+++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|+|+
T Consensus 656 ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qi 734 (902)
T PRK10517 656 ADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHL 734 (902)
T ss_pred CCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999888888777754479999999
Q ss_pred HHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccc--cccchhhH
Q psy16789 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS--KRDTTMTF 502 (608)
Q Consensus 425 l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~f 502 (608)
||+|+++| +|+++++++|+++++|++||+ ++...+.+.++...+..+++. ++.|+++++.+...... ...++..|
T Consensus 735 L~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~F 811 (902)
T PRK10517 735 LIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLGRFMVFFGPISSIFD-ILTFCLMWWVFHANTPETQTLFQSGWF 811 (902)
T ss_pred HHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccccchhhHhHHHHHHH
Confidence 99999999 679999999999999999987 232233333333333333222 22222222221111000 11233459
Q ss_pred HHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhccc--ccccccccccCC--hhHHHHHHHHHHHH
Q psy16789 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFP--PLQKVFQTEALT--INDIAFLTALTSTV 578 (608)
Q Consensus 503 ~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p--~l~~~f~~~~l~--~~~w~~~~~~~~~~ 578 (608)
..++++|+++++++|+.+. ++|+|++.+..++.+++++++++++| +++.+|++.+++ +..|+++++++..
T Consensus 812 ~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~- 885 (902)
T PRK10517 812 VVGLLSQTLIVHMIRTRRI-----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM- 885 (902)
T ss_pred HHHHHHHHHHHHhhccCCC-----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH-
Confidence 9999999999999998643 45688999999999999999999988 889999999999 4556665555544
Q ss_pred HHHHHHHHHHHHhhhh
Q psy16789 579 FFVSEIKKAIERICER 594 (608)
Q Consensus 579 ~~~~~l~K~~~r~~~~ 594 (608)
++.++.|.++.+..+
T Consensus 886 -~~~e~~K~~~~~~~~ 900 (902)
T PRK10517 886 -TLTQLVKGFYSRRYG 900 (902)
T ss_pred -HHHHHHHHHHHHhhc
Confidence 667887765444333
No 12
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.7e-72 Score=641.39 Aligned_cols=510 Identities=20% Similarity=0.284 Sum_probs=414.7
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cch--hhhhc---cccceeeeccccC
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRL--LEVGC---VCNNASIIGDSLL 137 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~--~ei~~---lc~~a~~~~~~~~ 137 (608)
..+...|..++.++...+++.+.-++.+.++++|.|||||+|+|++.+..+ .|. .+++. +|+. . +...
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~--~--~~~~ 382 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSY--F--QTGW 382 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCC--C--CCCC
Confidence 344455566788999999999999999999999999999999998877543 232 22222 2221 1 1235
Q ss_pred CCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHHHhhhh--------------
Q psy16789 138 GQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMILSQSC-------------- 201 (608)
Q Consensus 138 gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~~~~~~-------------- 201 (608)
+||+|.|+++++.+......+.+|+..+++||||++|+|++++++.+ ...+.||+++.+++.|.
T Consensus 383 ~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 462 (867)
T TIGR01524 383 KNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSES 462 (867)
T ss_pred CChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHH
Confidence 79999999999886533334457788999999999999999876533 34689999998876542
Q ss_pred ------hhhHHHhhccCceEEEEEcc-----------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcH
Q psy16789 202 ------SEYPKFQTLGKGLVAMARGS-----------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQ 264 (608)
Q Consensus 202 ------~~~~~~~~~g~r~l~~a~~~-----------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~ 264 (608)
+.+++++++|+|++++|+++ .|++|+|+|+++++||+|++++++|++|+++||+++|+|||++
T Consensus 463 ~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~ 542 (867)
T TIGR01524 463 EKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542 (867)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 34567899999999999974 3678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHh
Q psy16789 265 ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 265 ~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~ 344 (608)
.||.++|+++||.. +.+++|.+++.++++++.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++
T Consensus 543 ~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~ 620 (867)
T TIGR01524 543 IVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRK 620 (867)
T ss_pred HHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHh
Confidence 99999999999964 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHH
Q psy16789 345 ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQI 424 (608)
Q Consensus 345 A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (608)
|||||||+ +|++.+|++||+++.+++|..+.+++++||++|+|+++++.|.++.|+..++..+++.++..+.|++|.|+
T Consensus 621 AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qi 699 (867)
T TIGR01524 621 ADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHL 699 (867)
T ss_pred CCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999888888777766689999999
Q ss_pred HHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccccccc--ccccchhhH
Q psy16789 425 LWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIV--SKRDTTMTF 502 (608)
Q Consensus 425 l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~t~~f 502 (608)
+|+|+++| +|+++++++||++++|++||+ ++.+.+.+.++...+..+++ .++.++++++....... ....+|..|
T Consensus 700 l~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~t~~f 776 (867)
T TIGR01524 700 LIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRFMLCIGPVSSIF-DIATFLLMWFVFSANTVEEQALFQSGWF 776 (867)
T ss_pred HHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccchhhhhHHHHHHH
Confidence 99999999 699999999999999986665 66654444433332222222 22222222211111100 112367789
Q ss_pred HHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccc--cccccccccCChh--HHHHHHHHHHHH
Q psy16789 503 TCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPP--LQKVFQTEALTIN--DIAFLTALTSTV 578 (608)
Q Consensus 503 ~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~--l~~~f~~~~l~~~--~w~~~~~~~~~~ 578 (608)
..++++|+++++++|+.+. ++|.|++.+.+++++++++++++++|+ ++.+|++.|+|+. .|++++++++
T Consensus 777 ~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~-- 849 (867)
T TIGR01524 777 VVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY-- 849 (867)
T ss_pred HHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHH--
Confidence 9999999999999998644 456799999999999999999999997 4889999988655 4555554444
Q ss_pred HHHHHHHHHHHHhh
Q psy16789 579 FFVSEIKKAIERIC 592 (608)
Q Consensus 579 ~~~~~l~K~~~r~~ 592 (608)
+++.++.|++..+.
T Consensus 850 ~~~~e~~k~~~~~~ 863 (867)
T TIGR01524 850 MATMQLVKTFYIRR 863 (867)
T ss_pred HHHHHHHHHHHHHh
Confidence 46778888655444
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.6e-69 Score=630.03 Aligned_cols=494 Identities=20% Similarity=0.268 Sum_probs=406.7
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccc---------------------hhh
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHR---------------------LLE 121 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg---------------------~~e 121 (608)
+.+..+...+..++.++...+++.+..+..+..+++|.|||||+|+|++.+.-+.. ...
T Consensus 416 ~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1054)
T TIGR01657 416 AELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHK 495 (1054)
T ss_pred HHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHH
Confidence 34455666667888999999999999999999999999999999998876643210 011
Q ss_pred hhccccceeeeccccCCCccHHHHHHHHHHcCcc-c----------------cccccccceeeeCChHHHHHHhHhhhcC
Q psy16789 122 VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLY-A----------------VNEHYVRLKEYPFSSEQKMMAVRVHKIG 184 (608)
Q Consensus 122 i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~-~----------------~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 184 (608)
+++.||++...++...|||+|.|+++++.+.... . ...+|++++++||+|++|||+++++..+
T Consensus 496 ~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~ 575 (1054)
T TIGR01657 496 ALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTND 575 (1054)
T ss_pred HHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcC
Confidence 6789999887777889999999999987542111 0 0246788999999999999999987533
Q ss_pred ---CcCCCCchhHHHHhhhh---------hhhHHHhhccCceEEEEEcc----------------CCCCceEEEEeeecC
Q psy16789 185 ---HNLPSKRDGKMILSQSC---------SEYPKFQTLGKGLVAMARGS----------------NLQDLCYMGLVGICD 236 (608)
Q Consensus 185 ---~~~~~kg~~~~~~~~~~---------~~~~~~~~~g~r~l~~a~~~----------------~e~~l~~~G~~~~~d 236 (608)
...++||++|.+++.|. +.+++|+++|+|||++|||+ .|+||+|+|+++++|
T Consensus 576 ~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d 655 (1054)
T TIGR01657 576 ERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFEN 655 (1054)
T ss_pred CCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEec
Confidence 23699999999998664 46788999999999999984 267999999999999
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC-----------------------------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG----------------------------------- 281 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~----------------------------------- 281 (608)
|+|++++++|++|+++||+++|+|||++.||.++|+++||..+..
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEI 735 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccc
Confidence 999999999999999999999999999999999999999964331
Q ss_pred ------------------ccccchhhcc---cCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHH
Q psy16789 282 ------------------KVLSGDQIDQ---MTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGV 340 (608)
Q Consensus 282 ------------------~vi~g~~~~~---~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~ 340 (608)
.+++|++++. ..++++.+.+.++.||||++|+||.++|+.+|+.|+.|+|||||.||++
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ 815 (1054)
T TIGR01657 736 PYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCG 815 (1054)
T ss_pred cCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 3566766654 4557888999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchh
Q psy16789 341 ALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLN 420 (608)
Q Consensus 341 al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (608)
|||+|||||||+ ++ + |+.+||+++.+++|+++.++|++||+++.|+++.++|.+..++.......+ ++..+.|++
T Consensus 816 ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~ 890 (1054)
T TIGR01657 816 ALKQADVGISLS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLG 890 (1054)
T ss_pred HHHhcCcceeec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCc
Confidence 999999999998 33 3 457999999999999999999999999999999999999988876544433 334458899
Q ss_pred HHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccc--------
Q psy16789 421 AMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNI-------- 492 (608)
Q Consensus 421 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 492 (608)
++|++|+|++++.+++++++.++|++++|++|| ..+++++.++.+++.+++++.++.++.+......+.
T Consensus 891 ~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1054)
T TIGR01657 891 DGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVD 967 (1054)
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCC
Confidence 999999999999999999999999999999998 468999999999999999888777666654322111
Q ss_pred -----cccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHH-HHh-cccccccccccccCCh
Q psy16789 493 -----VSKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQL-FVI-YFPPLQKVFQTEALTI 565 (608)
Q Consensus 493 -----~~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~-~ii-~~p~l~~~f~~~~l~~ 565 (608)
.....+|++|... ..+.+..+.+++. .++|+.++++|+++++++++++++++ +++ +.|+++..|++.|+|.
T Consensus 968 ~~~~~~~~~~~T~~f~~~-~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 968 LEKENFPNLLNTVLFFVS-SFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred cccccCccHHHHHHHHHH-HHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 0011247777444 4455555666664 77899999999999999888777665 333 6889999999999986
Q ss_pred h
Q psy16789 566 N 566 (608)
Q Consensus 566 ~ 566 (608)
.
T Consensus 1046 ~ 1046 (1054)
T TIGR01657 1046 E 1046 (1054)
T ss_pred H
Confidence 4
No 14
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.5e-64 Score=590.13 Aligned_cols=507 Identities=18% Similarity=0.203 Sum_probs=388.5
Q ss_pred cccccccccccccccceeeecCCCCCccccceEEEEc--------c-------------c--------------------
Q psy16789 80 YVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--------H-------------R-------------------- 118 (608)
Q Consensus 80 ~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--------k-------------g-------------------- 118 (608)
...++..+-.++.+.++++|.|||||+|+|.+.+..+ + +
T Consensus 344 ~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (1057)
T TIGR01652 344 PASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVD 423 (1057)
T ss_pred cceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCc
Confidence 3688999999999999999999999999988766432 0 0
Q ss_pred ----------------hhh---hhccccceeeec--cc------cCCCccHHHHHHHHHHcCccc---------------
Q psy16789 119 ----------------LLE---VGCVCNNASIIG--DS------LLGQPTEGALLAAGMKFGLYA--------------- 156 (608)
Q Consensus 119 ----------------~~e---i~~lc~~a~~~~--~~------~~gdp~E~Al~~~~~~~~~~~--------------- 156 (608)
..+ ++++||++.... +. ..|||+|.||+++|+..|+..
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~ 503 (1057)
T TIGR01652 424 PRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMH 503 (1057)
T ss_pred HHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeC
Confidence 112 568999987652 21 258999999999999988632
Q ss_pred -cccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHHHhhhh-----------hhhHHHhhccCceEEEEEcc-
Q psy16789 157 -VNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMILSQSC-----------SEYPKFQTLGKGLVAMARGS- 221 (608)
Q Consensus 157 -~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~~~~~~-----------~~~~~~~~~g~r~l~~a~~~- 221 (608)
...+|++++++||+|+||||++++++.+ ..+++|||++.+++.|+ +.+++|+++|+||+++|+|.
T Consensus 504 ~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l 583 (1057)
T TIGR01652 504 GETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYREL 583 (1057)
T ss_pred CCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEEC
Confidence 1246899999999999999999998643 34699999998887654 34678999999999999973
Q ss_pred --------------------------------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHH
Q psy16789 222 --------------------------------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATA 269 (608)
Q Consensus 222 --------------------------------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ 269 (608)
+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+.+||.+
T Consensus 584 ~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~ 663 (1057)
T TIGR01652 584 SEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAIN 663 (1057)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHH
Confidence 268999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCC-----------------------------------------ccccchhhcccCHH----HHHHHhhcc
Q psy16789 270 IASMVGLDTIHG-----------------------------------------KVLSGDQIDQMTEH----QLQQVVNSV 304 (608)
Q Consensus 270 ia~~~gi~~~~~-----------------------------------------~vi~g~~~~~~~~~----~~~~~~~~~ 304 (608)
+|++||+...+. .+++|++++...++ ++.+.+.++
T Consensus 664 IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~ 743 (1057)
T TIGR01652 664 IGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKC 743 (1057)
T ss_pred HHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhC
Confidence 999999976542 26777777644433 344455555
Q ss_pred e--EEEEeCchhHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH-H
Q psy16789 305 T--VFYRVTPRHKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI-E 380 (608)
Q Consensus 305 ~--v~~r~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i-~ 380 (608)
. ||||++|+||.++|+.+|+. |++|+|+|||.||++||++|||||++.+.+..+|+.+||+++. +|..+.+++ .
T Consensus 744 ~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~ 821 (1057)
T TIGR01652 744 KAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLV 821 (1057)
T ss_pred CEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHh
Confidence 4 99999999999999999998 9999999999999999999999999875666689999999997 599999987 8
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHhhhhHhhhcc--CCCCccccccCCC-
Q psy16789 381 EGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRI---PNPLNAMQILWINIIMDGPPAQSLGV--EPVDDDVKIQKPR- 454 (608)
Q Consensus 381 ~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~P~- 454 (608)
|||++|.|+++++.|.+++|+..+++.+++.++.. .+++++++++|+|++++.+|+++++. +++++++|.++|+
T Consensus 822 ~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~l 901 (1057)
T TIGR01652 822 HGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQL 901 (1057)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHH
Confidence 99999999999999999999998888877766533 35799999999999999999999976 5677889999997
Q ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccc--------cccchhhHHHHHHHHHHHHHHhhccccce
Q psy16789 455 ---NVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS--------KRDTTMTFTCFVFFDMFNALSCRSQIKSV 523 (608)
Q Consensus 455 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~t~~f~~lv~~~l~~~~~~~~~~~~~ 523 (608)
.++.++++.+.++.|++.|++++++.+++.+..+..+... ....++.|.++++...+.++...
T Consensus 902 y~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 975 (1057)
T TIGR01652 902 YREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEI------ 975 (1057)
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHH------
Confidence 5678899999999999999998877766544433221100 01112233333332222222111
Q ss_pred eeeCCccchHHHHHHHHHHHHHHHHh-ccc---ccccc---cccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy16789 524 FTIGLFTNKMFLFAVCASVVGQLFVI-YFP---PLQKV---FQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKC 596 (608)
Q Consensus 524 f~~~~~~N~~~~~~~~~~i~~~~~ii-~~p---~l~~~---f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~ 596 (608)
. .++++.++++.+++++.+++. .++ .-... +...-.++.+|+.+++..+++++++.++|.+++.+.+..
T Consensus 976 ---~-~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~ 1051 (1057)
T TIGR01652 976 ---N-RWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPD 1051 (1057)
T ss_pred ---h-HhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 1 223333333333433332221 111 10111 112223577999999999999999999999999887764
Q ss_pred hh
Q psy16789 597 LR 598 (608)
Q Consensus 597 ~~ 598 (608)
.+
T Consensus 1052 ~~ 1053 (1057)
T TIGR01652 1052 YD 1053 (1057)
T ss_pred HH
Confidence 33
No 15
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=9.3e-63 Score=554.78 Aligned_cols=463 Identities=22% Similarity=0.326 Sum_probs=374.2
Q ss_pred HHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEcc----ch--hh---hhccccceeeeccc
Q psy16789 65 LAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLH----RL--LE---VGCVCNNASIIGDS 135 (608)
Q Consensus 65 l~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~k----g~--~e---i~~lc~~a~~~~~~ 135 (608)
+..+...|..++.++...+++.+.-++.+.++++|.|||||+|+|++.+..+. +. .+ ..++|+. .
T Consensus 256 ~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~------~ 329 (755)
T TIGR01647 256 LSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASR------E 329 (755)
T ss_pred HHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCC------C
Confidence 34445556678889999999999999999999999999999999987765431 11 12 2233432 3
Q ss_pred cCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhc---CCcCCCCchhHHHHhhh----------hh
Q psy16789 136 LLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKI---GHNLPSKRDGKMILSQS----------CS 202 (608)
Q Consensus 136 ~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~---~~~~~~kg~~~~~~~~~----------~~ 202 (608)
..+||+|.|+++++.+.+ ..+..|+..+.+||++.+|+|++++++. +...+.||+++.+++.| .+
T Consensus 330 ~~~~pi~~Ai~~~~~~~~--~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~ 407 (755)
T TIGR01647 330 EDQDAIDTAVLGSAKDLK--EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEE 407 (755)
T ss_pred CCCChHHHHHHHHHHHhH--HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHH
Confidence 458999999999987643 2234577888999999999999887642 23347899999888765 33
Q ss_pred hhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC---
Q psy16789 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI--- 279 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~--- 279 (608)
.+++++++|+|++++|+++.|++|+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||...
T Consensus 408 ~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~ 487 (755)
T TIGR01647 408 KVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYT 487 (755)
T ss_pred HHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcC
Confidence 45778999999999999887899999999999999999999999999999999999999999999999999999753
Q ss_pred CCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHH
Q psy16789 280 HGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVC 359 (608)
Q Consensus 280 ~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a 359 (608)
...+.+|++.+.++++++.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||+ +|++.+
T Consensus 488 ~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvA 566 (755)
T TIGR01647 488 ADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAA 566 (755)
T ss_pred HHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHH
Confidence 1234455555678889999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred HhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhh
Q psy16789 360 KEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSL 439 (608)
Q Consensus 360 ~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l 439 (608)
|++||+++.+++|.++.+++++||++|+|+++++.|.++.|+..+++.+++.++. +.|++|+|++|+|+++|. +++++
T Consensus 567 keaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~-~~~l~~~~il~~~l~~d~-~~~~l 644 (755)
T TIGR01647 567 RSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILIL-NFYFPPIMVVIIAILNDG-TIMTI 644 (755)
T ss_pred HHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh-CcchhHHHHHHHHHHHhH-hHhhc
Confidence 9999999999999999999999999999999999999999999887766666532 245999999999999997 59999
Q ss_pred ccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc------ccc---cccccchhhHHHHHHHHH
Q psy16789 440 GVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMS------DNI---VSKRDTTMTFTCFVFFDM 510 (608)
Q Consensus 440 ~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~t~~f~~lv~~~l 510 (608)
+++++++. ++|+.+ .+. .++..++..|.+..+..++.+++.+. ... .....+|+.|..++++|+
T Consensus 645 ~~~~~~~~---~~p~~~---~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~ 717 (755)
T TIGR01647 645 AYDNVKPS---KLPQRW---NLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQ 717 (755)
T ss_pred cCCCCCCC---CCCCcc---chH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHH
Confidence 99988742 344333 343 56666777777766665555544331 111 123578999999999999
Q ss_pred HHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHH
Q psy16789 511 FNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFV 548 (608)
Q Consensus 511 ~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~i 548 (608)
++++++|+.+.+.++ ..+++++.+.++.+++..++
T Consensus 718 ~~~~~~r~~~~~~~~---~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 718 ATIFVTRTHGFFWSE---RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred HHHheeccCCCCccc---CCcHHHHHHHHHHHHHHHHH
Confidence 999999997654332 35666666666665554443
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=5.6e-60 Score=546.18 Aligned_cols=503 Identities=17% Similarity=0.182 Sum_probs=374.7
Q ss_pred ccccccccccccccceeeecCCCCCccccceEEEEc--------c-----------------c-----------------
Q psy16789 81 VRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL--------H-----------------R----------------- 118 (608)
Q Consensus 81 ~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~--------k-----------------g----------------- 118 (608)
..++...-+++++....++.|||||+|+|.|.+..+ + +
T Consensus 439 ~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1178)
T PLN03190 439 FQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLE 518 (1178)
T ss_pred ceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHh
Confidence 357888999999999999999999999997765321 0 0
Q ss_pred -------------hhh---hhccccceeee--cc----------ccCCCccHHHHHHHHHHcCcc--------------c
Q psy16789 119 -------------LLE---VGCVCNNASII--GD----------SLLGQPTEGALLAAGMKFGLY--------------A 156 (608)
Q Consensus 119 -------------~~e---i~~lc~~a~~~--~~----------~~~gdp~E~Al~~~~~~~~~~--------------~ 156 (608)
..+ ++++||++... ++ ...+||||.||+++|.+.|+. .
T Consensus 519 ~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~ 598 (1178)
T PLN03190 519 LSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG 598 (1178)
T ss_pred hhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeecc
Confidence 012 57899998763 11 123499999999999998861 2
Q ss_pred cccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHHHhhhh------------hhhHHHhhccCceEEEEEcc-
Q psy16789 157 VNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMILSQSC------------SEYPKFQTLGKGLVAMARGS- 221 (608)
Q Consensus 157 ~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~~~~~~------------~~~~~~~~~g~r~l~~a~~~- 221 (608)
.+.+|+.++++||+|+||||+|++++++ ..+++|||++.+++.|. +.+++|+++|+|||++|||.
T Consensus 599 ~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l 678 (1178)
T PLN03190 599 ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMREL 678 (1178)
T ss_pred ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeC
Confidence 4568999999999999999999997543 34699999999887653 45788999999999999983
Q ss_pred --------------------------------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHH
Q psy16789 222 --------------------------------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATA 269 (608)
Q Consensus 222 --------------------------------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ 269 (608)
+|+||+++|+++++|++|++++++|+.|+++||++||+|||+.+||.+
T Consensus 679 ~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~ 758 (1178)
T PLN03190 679 NDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAIS 758 (1178)
T ss_pred CHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence 268999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCC-------------------------------------------------ccccchhhcccCH----HH
Q psy16789 270 IASMVGLDTIHG-------------------------------------------------KVLSGDQIDQMTE----HQ 296 (608)
Q Consensus 270 ia~~~gi~~~~~-------------------------------------------------~vi~g~~~~~~~~----~~ 296 (608)
||++||+..++. .+++|.+++.+.+ ++
T Consensus 759 IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~ 838 (1178)
T PLN03190 759 IGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQ 838 (1178)
T ss_pred HHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHH
Confidence 999999964431 3556666665543 45
Q ss_pred HHHHhhcce--EEEEeCchhHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcc
Q psy16789 297 LQQVVNSVT--VFYRVTPRHKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFN 373 (608)
Q Consensus 297 ~~~~~~~~~--v~~r~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~ 373 (608)
+.++..++. ||||++|.||+++|+.+|+. +.+|+|+|||+||++||++|||||++.+.++.+|+.+|||++. .|.
T Consensus 839 f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr 916 (1178)
T PLN03190 839 LFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFR 916 (1178)
T ss_pred HHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhH
Confidence 566666655 79999999999999999997 5889999999999999999999999987888899999999997 566
Q ss_pred hHHHHH-HHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHhhhhHhhhcc-C--CCCc
Q psy16789 374 TIIAAI-EEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRI---PNPLNAMQILWINIIMDGPPAQSLGV-E--PVDD 446 (608)
Q Consensus 374 ~i~~~i-~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~l~~-~--~~~~ 446 (608)
-+.+++ .|||+.|.|+.+.+.|.+++|++..++.+.+.++.. .+.+.++.+.++|++++.+|.++++. + -+++
T Consensus 917 ~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~ 996 (1178)
T PLN03190 917 FLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRR 996 (1178)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHH
Confidence 677666 499999999999999999999998888887766544 35678899999999999999999966 2 2344
Q ss_pred cccccCCC---CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccc-cccchhhHHHHHHHHHHHHHHhhccccc
Q psy16789 447 DVKIQKPR---NVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVS-KRDTTMTFTCFVFFDMFNALSCRSQIKS 522 (608)
Q Consensus 447 ~~~~~~P~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~f~~lv~~~l~~~~~~~~~~~~ 522 (608)
.+++.|-. .++...++.+.|+.|++.|++++++.|++.+..+...... ....++.+.+.++..-+.++...
T Consensus 997 ~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~----- 1071 (1178)
T PLN03190 997 TLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDI----- 1071 (1178)
T ss_pred HHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHH-----
Confidence 44444322 2356789999999999999999887776655443222111 01112222222222211111111
Q ss_pred eeeeCCccchHHHHHHHHHHHHHH----HHhcccccccccc--cccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy16789 523 VFTIGLFTNKMFLFAVCASVVGQL----FVIYFPPLQKVFQ--TEALTINDIAFLTALTSTVFFVSEIKKAIERICERK 595 (608)
Q Consensus 523 ~f~~~~~~N~~~~~~~~~~i~~~~----~ii~~p~l~~~f~--~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~ 595 (608)
. .++++.++++.+++++.+ ++..+|....++. ...-++.+|+.++++.+++++++.++|.++|.+.+.
T Consensus 1072 ----~-~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~ 1145 (1178)
T PLN03190 1072 ----I-RWNWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPC 1145 (1178)
T ss_pred ----h-hhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 123332233333333222 2222332222111 112357789999999999999999999998877664
No 17
>KOG0208|consensus
Probab=100.00 E-value=9e-56 Score=471.36 Aligned_cols=508 Identities=19% Similarity=0.277 Sum_probs=377.1
Q ss_pred hhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc-----------------------------cc--hh--
Q psy16789 74 YAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL-----------------------------HR--LL-- 120 (608)
Q Consensus 74 ~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~-----------------------------kg--~~-- 120 (608)
.+++++....-...-.-.-+...+.|.|||||+|+++-.+.-+ ++ .+
T Consensus 447 ~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 526 (1140)
T KOG0208|consen 447 SRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMG 526 (1140)
T ss_pred HHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchH
Confidence 3444444333222222334678899999999999775433221 11 11
Q ss_pred --h-hhccccceeeeccccCCCccHHHHHHHHHHcCcc----c--------------------------cc-ccccccee
Q psy16789 121 --E-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLY----A--------------------------VN-EHYVRLKE 166 (608)
Q Consensus 121 --e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~----~--------------------------~~-~~~~~~~~ 166 (608)
- .++.||.....++++.|||.|..+++...+.-.+ . .. .++.+++.
T Consensus 527 ~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~ 606 (1140)
T KOG0208|consen 527 NLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQ 606 (1140)
T ss_pred HHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEe
Confidence 1 5688998888899999999999999876652210 0 00 14778899
Q ss_pred eeCChHHHHHHhHhhhcCCc---CCCCchhHHHHh---------hhhhhhHHHhhccCceEEEEEcc-------------
Q psy16789 167 YPFSSEQKMMAVRVHKIGHN---LPSKRDGKMILS---------QSCSEYPKFQTLGKGLVAMARGS------------- 221 (608)
Q Consensus 167 ~pF~s~~k~m~v~~~~~~~~---~~~kg~~~~~~~---------~~~~~~~~~~~~g~r~l~~a~~~------------- 221 (608)
+||+|..|||||+++.++.+ .+.||++|.+.+ .+++.++.|+.+|+||+|+|+|+
T Consensus 607 feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~ 686 (1140)
T KOG0208|consen 607 FEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLS 686 (1140)
T ss_pred cccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhcc
Confidence 99999999999999865433 499999998876 46778999999999999999983
Q ss_pred ---CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc----------------
Q psy16789 222 ---NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK---------------- 282 (608)
Q Consensus 222 ---~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~---------------- 282 (608)
.|+||+|+|++.+|+++|++++++|++|.+|+||++|+||||..||..+||+||+..+...
T Consensus 687 Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~ 766 (1140)
T KOG0208|consen 687 RDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQ 766 (1140)
T ss_pred HhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCce
Confidence 5899999999999999999999999999999999999999999999999999999554311
Q ss_pred ---------------------------------------cccchhhc---ccCHHHHHHHhhcceEEEEeCchhHHHHHH
Q psy16789 283 ---------------------------------------VLSGDQID---QMTEHQLQQVVNSVTVFYRVTPRHKLTIVK 320 (608)
Q Consensus 283 ---------------------------------------vi~g~~~~---~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~ 320 (608)
.++|+.++ +...+.+.+++.+..|||||+|.||.++|+
T Consensus 767 i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie 846 (1140)
T KOG0208|consen 767 IVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIE 846 (1140)
T ss_pred eEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHH
Confidence 12333332 224567788888999999999999999999
Q ss_pred HHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhH
Q psy16789 321 AFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTS 400 (608)
Q Consensus 321 ~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~ 400 (608)
.+|+.|+.|+|||||+||+.|||+||+||+++.+ +|.-||.++..-.+..++.+.|+|||+.+.....+++| +..
T Consensus 847 ~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea---EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkY--Mal 921 (1140)
T KOG0208|consen 847 ALQKLGYKVGFCGDGANDCGALKAADVGISLSEA---EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKY--MAL 921 (1140)
T ss_pred HHHhcCcEEEecCCCcchhhhhhhcccCcchhhh---hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHH--HHH
Confidence 9999999999999999999999999999999843 44558999998899999999999999999554444444 455
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q psy16789 401 IAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGT 480 (608)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~ 480 (608)
++++.+..+..++.....+++.|.++++++...+.+++++..+|..++-..|| ...+++++.+...+.|.++..+..
T Consensus 922 Ys~iqFisv~~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q 998 (1140)
T KOG0208|consen 922 YSAIQFISVVFLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQ 998 (1140)
T ss_pred HHHHHHHhhheeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHH
Confidence 55555566666777788999999999999999999999999999999988877 456888888888777777766666
Q ss_pred HHhhhhccccccc-----------ccccchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHHHHHHHHHHHHh
Q psy16789 481 LYVFKREMSDNIV-----------SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVI 549 (608)
Q Consensus 481 ~~~~~~~~~~~~~-----------~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii 549 (608)
+..+......+.. .....|..|..-.+..+++.+... ..++|+.++|+|+.+...+....+..+.++
T Consensus 999 ~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S--~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~ 1076 (1140)
T KOG0208|consen 999 WILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLS--KGSPFRRPLWKNVLFKVFITVIILSTIYLL 1076 (1140)
T ss_pred HhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeec--cCCcccCchhcCceeeeehhhHHhhhhhhh
Confidence 5554433221111 112335556555555555444332 467899999999988777666666655555
Q ss_pred cccccc---cccccccCChhHH-HHHHHHHHHHHHHHHHHHHHHHh
Q psy16789 550 YFPPLQ---KVFQTEALTINDI-AFLTALTSTVFFVSEIKKAIERI 591 (608)
Q Consensus 550 ~~p~l~---~~f~~~~l~~~~w-~~~~~~~~~~~~~~~l~K~~~r~ 591 (608)
+.+... ..+..++.+-+.. +++++.....+....+.+-..+.
T Consensus 1077 ~~~~~~~~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~~~~~~~~ 1122 (1140)
T KOG0208|consen 1077 FVNYLFIEWKLLQLTYIPTTFDRFIILLVVISYFALNYIQPSVGRM 1122 (1140)
T ss_pred hccccchhhhhhceeccCcchhHHHHHHHHHHHHHHHHhhhhhhch
Confidence 544222 3466777766433 34444444555555555444443
No 18
>KOG0206|consensus
Probab=100.00 E-value=2.2e-57 Score=507.14 Aligned_cols=509 Identities=18% Similarity=0.221 Sum_probs=376.0
Q ss_pred cccccccccccccceeeecCCCCCccccceEEEEc------------------------------------------c--
Q psy16789 82 RLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL------------------------------------------H-- 117 (608)
Q Consensus 82 ~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~------------------------------------------k-- 117 (608)
..+.-.-+++.+....+..|||||+|+|.|....+ +
T Consensus 374 ~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 453 (1151)
T KOG0206|consen 374 QARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGL 453 (1151)
T ss_pred ccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccc
Confidence 44556667888999999999999999886544210 0
Q ss_pred -----c---hhh---hhccccceeeecc-------ccCCCccHHHHHHHHHHcCccc--------------cccccccce
Q psy16789 118 -----R---LLE---VGCVCNNASIIGD-------SLLGQPTEGALLAAGMKFGLYA--------------VNEHYVRLK 165 (608)
Q Consensus 118 -----g---~~e---i~~lc~~a~~~~~-------~~~gdp~E~Al~~~~~~~~~~~--------------~~~~~~~~~ 165 (608)
+ ..+ .+++||++....+ ....+|+|.|+++.|+..|... ..++|+.++
T Consensus 454 ~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~ 533 (1151)
T KOG0206|consen 454 WSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLN 533 (1151)
T ss_pred cccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEE
Confidence 0 112 6799999877652 2457999999999999988632 246899999
Q ss_pred eeeCChHHHHHHhHhhhcCCc--CCCCchhHHHHhhh-----------hhhhHHHhhccCceEEEEEc------------
Q psy16789 166 EYPFSSEQKMMAVRVHKIGHN--LPSKRDGKMILSQS-----------CSEYPKFQTLGKGLVAMARG------------ 220 (608)
Q Consensus 166 ~~pF~s~~k~m~v~~~~~~~~--~~~kg~~~~~~~~~-----------~~~~~~~~~~g~r~l~~a~~------------ 220 (608)
..||+|.||||||+|+++... +++|||+..+.+++ ++++++|+.+|+||||+|||
T Consensus 534 iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~ 613 (1151)
T KOG0206|consen 534 VLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNE 613 (1151)
T ss_pred EeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHH
Confidence 999999999999999976544 59999998777643 35789999999999999998
Q ss_pred ---------------------cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC
Q psy16789 221 ---------------------SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI 279 (608)
Q Consensus 221 ---------------------~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~ 279 (608)
.+|+||+++|.+++||+++++||++|++|++||||+||+|||+.+||.+|+..|++..+
T Consensus 614 ~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~ 693 (1151)
T KOG0206|consen 614 RYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQ 693 (1151)
T ss_pred HHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCC
Confidence 25899999999999999999999999999999999999999999999999999999655
Q ss_pred C-----------------------------------------------CccccchhhcccCHHH----HHHHh--hcceE
Q psy16789 280 H-----------------------------------------------GKVLSGDQIDQMTEHQ----LQQVV--NSVTV 306 (608)
Q Consensus 280 ~-----------------------------------------------~~vi~g~~~~~~~~~~----~~~~~--~~~~v 306 (608)
+ +.+++|+++....+.+ +.+.. .+..+
T Consensus 694 ~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sVi 773 (1151)
T KOG0206|consen 694 DMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVI 773 (1151)
T ss_pred CceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEE
Confidence 3 2344444443322221 12222 23459
Q ss_pred EEEeCchhHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHH
Q psy16789 307 FYRVTPRHKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGI 385 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~ 385 (608)
|||++|.||+.+|+..++. +..+++||||+||++||+.|||||++++.++.+|..+||+.+....|.....++ |||+.
T Consensus 774 CCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~ 852 (1151)
T KOG0206|consen 774 CCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWS 852 (1151)
T ss_pred EccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee-eccee
Confidence 9999999999999999854 889999999999999999999999999999999999999999877766655444 99999
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHh---cCCCchhHHHHHHHHHHHhhhhHhhhcc--CCCCccccccCCC----CC
Q psy16789 386 FYNIRNFVRFQLSTSIAALSLIALATLL---RIPNPLNAMQILWINIIMDGPPAQSLGV--EPVDDDVKIQKPR----NV 456 (608)
Q Consensus 386 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~P~----~~ 456 (608)
|.|+.+++.|.+++|+...+..+.+.++ +....+.++++.++|++++.+|.+.+|. .+.+...+.+.|. ..
T Consensus 853 Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~ 932 (1151)
T KOG0206|consen 853 YIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQ 932 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhh
Confidence 9999999999999999988777777665 3446889999999999999999999988 2334444444453 33
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccccccccccchh---hHHHHHHHHHHHHHHhhccccceeeeCCccchH
Q psy16789 457 KEPMITRALVVNVLMSASIIIVGTLYVFKREMSDNIVSKRDTTM---TFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKM 533 (608)
Q Consensus 457 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~---~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~ 533 (608)
+...++.+.++.|+..|+++.+++|++.+..+.+......+++. +|.+.+++.++...+.+ -....+.| +|+
T Consensus 933 ~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~----iaL~~~yw-T~i 1007 (1151)
T KOG0206|consen 933 LNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLK----IALETSYW-TWI 1007 (1151)
T ss_pred hccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEee----eeeeehhe-eHH
Confidence 56789999999999999999988887766555432222222222 22222222222222111 11222222 222
Q ss_pred HHHHHHHHHHHHH--HHhc---ccccc------cccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy16789 534 FLFAVCASVVGQL--FVIY---FPPLQ------KVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKC 596 (608)
Q Consensus 534 ~~~~~~~~i~~~~--~ii~---~p~l~------~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~ 596 (608)
-++.+.+++++.+ .++| .|.+. ..+....-++.+|+.+++.++++++++.++|.+.+.+.++.
T Consensus 1008 ~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~ 1081 (1151)
T KOG0206|consen 1008 NHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTD 1081 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcH
Confidence 2222222222222 1122 11111 12222334678999999999999999999999998887773
No 19
>KOG0210|consensus
Probab=100.00 E-value=2.4e-56 Score=457.87 Aligned_cols=496 Identities=19% Similarity=0.226 Sum_probs=378.0
Q ss_pred cccccccccccccceeeecCCCCCccccceEEEE---------------------------------------------c
Q psy16789 82 RLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF---------------------------------------------L 116 (608)
Q Consensus 82 ~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~---------------------------------------------~ 116 (608)
.++.-.--++.++.+-+..|||||+|||++..-- +
T Consensus 394 vvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv 473 (1051)
T KOG0210|consen 394 VVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARV 473 (1051)
T ss_pred eeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHH
Confidence 4555555688999999999999999999765521 0
Q ss_pred cchhhhhccccceeeecc------ccCCCccHHHHHHHHHHcCccc---------------cccccccceeeeCChHHHH
Q psy16789 117 HRLLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLYA---------------VNEHYVRLKEYPFSSEQKM 175 (608)
Q Consensus 117 kg~~ei~~lc~~a~~~~~------~~~gdp~E~Al~~~~~~~~~~~---------------~~~~~~~~~~~pF~s~~k~ 175 (608)
+.+.+.+++||++++..+ ....+|+|+||++|.+..|+.. ...+|++++.+||+|+.||
T Consensus 474 ~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKR 553 (1051)
T KOG0210|consen 474 RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKR 553 (1051)
T ss_pred HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccce
Confidence 112336799999876322 3678999999999999888632 1248999999999999999
Q ss_pred HHhHhhhcCCc---CCCCchhHHHH------hhhhhhhHHHhhccCceEEEEEc--------------------------
Q psy16789 176 MAVRVHKIGHN---LPSKRDGKMIL------SQSCSEYPKFQTLGKGLVAMARG-------------------------- 220 (608)
Q Consensus 176 m~v~~~~~~~~---~~~kg~~~~~~------~~~~~~~~~~~~~g~r~l~~a~~-------------------------- 220 (608)
|+++|++++.. .+.|||+-.+- +..+++...|+++|+|+|.+|+|
T Consensus 554 MGIIVr~e~~~evtfylKGAD~VMs~iVq~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~ 633 (1051)
T KOG0210|consen 554 MGIIVRDETTEEVTFYLKGADVVMSGIVQYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQ 633 (1051)
T ss_pred eeEEEecCCCceEEEEEecchHHHhcccccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHH
Confidence 99999976433 48899986443 24567778899999999999998
Q ss_pred --------cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC------------
Q psy16789 221 --------SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH------------ 280 (608)
Q Consensus 221 --------~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~------------ 280 (608)
.+|+||.++|+.|.||+++++++.+++.||+|||++||+|||+.+||+.+|+..++...+
T Consensus 634 ~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr 713 (1051)
T KOG0210|consen 634 KMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSR 713 (1051)
T ss_pred HHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCc
Confidence 147999999999999999999999999999999999999999999999999999995432
Q ss_pred ----------------Cccccchhhccc---CHHHHHHHhhc--ceEEEEeCchhHHHHHHHHHHC-CCEEEEEcCCcCc
Q psy16789 281 ----------------GKVLSGDQIDQM---TEHQLQQVVNS--VTVFYRVTPRHKLTIVKAFQAN-GVIVGMTGDGVND 338 (608)
Q Consensus 281 ----------------~~vi~g~~~~~~---~~~~~~~~~~~--~~v~~r~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND 338 (608)
..+++|+.++-. -++|+.++... ..++||++|.||+++++.+|+. |..|+++|||.||
T Consensus 714 ~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGND 793 (1051)
T KOG0210|consen 714 GDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGND 793 (1051)
T ss_pred hHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCcc
Confidence 456777776632 34566665554 4599999999999999999986 8999999999999
Q ss_pred HHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH-HHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCC
Q psy16789 339 GVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI-EEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPN 417 (608)
Q Consensus 339 ~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (608)
++||++||+||++.++++.+|.-|||+.++ .|..+.+++ .|||..|+|..+..+|.+...+.......+++......
T Consensus 794 VsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~ 871 (1051)
T KOG0210|consen 794 VSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFA 871 (1051)
T ss_pred chheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhc
Confidence 999999999999988999999999999997 677887776 58999999999999999988877655554444333323
Q ss_pred c---hhHHHHHHHHHHHhhhhHhhhccCC-CCccccccCCCC----CCCCCcchHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy16789 418 P---LNAMQILWINIIMDGPPAQSLGVEP-VDDDVKIQKPRN----VKEPMITRALVVNVLMSASIIIVGTLYVFKREMS 489 (608)
Q Consensus 418 ~---~~~~~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~P~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (608)
| +..+.+.-+.-+++.+|.+++..+. ..+++....|.- .+++.++.+.|+.|.+.+++++....+.++..+.
T Consensus 872 ~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~ 951 (1051)
T KOG0210|consen 872 PVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFD 951 (1051)
T ss_pred chHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhh
Confidence 3 3344566677789999999999863 344444444431 2567788888888888888776555443332222
Q ss_pred ccccccccchhhHHHHHHHHHHHH-HHhhccccceeeeCCccchHHHHHHHHHHHHHHHHhcccccccccccccCC-hhH
Q psy16789 490 DNIVSKRDTTMTFTCFVFFDMFNA-LSCRSQIKSVFTIGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALT-IND 567 (608)
Q Consensus 490 ~~~~~~~~~t~~f~~lv~~~l~~~-~~~~~~~~~~f~~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~-~~~ 567 (608)
.. .-..-++.|.++++..+... +..+ .++|.++.+-++++.+ .++.+|.+.++|....+. +.+
T Consensus 952 ~e--f~~ivaisFtaLi~tELiMVaLtv~-----------tw~~~m~vae~lsL~~--Yivsl~~l~~yfd~~f~~~~~F 1016 (1051)
T KOG0210|consen 952 TE--FIHIVAISFTALILTELIMVALTVR-----------TWHWLMVVAELLSLAL--YIVSLAFLHEYFDRYFILTYVF 1016 (1051)
T ss_pred hh--heEeeeeeeHHHHHHHHHHHhhhhh-----------hhhHHHHHHHHHHHHH--HHHHHHHHHhHHHHHHHHHHHH
Confidence 21 11245788999998887543 3222 2556666666666555 455566678888776643 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy16789 568 IAFLTALTSTVFFVSEIKKAIERICER 594 (608)
Q Consensus 568 w~~~~~~~~~~~~~~~l~K~~~r~~~~ 594 (608)
+.-+.++.++++++.++.|.++|++.+
T Consensus 1017 l~k~t~I~~vS~Lpl~~~K~lrrk~sP 1043 (1051)
T KOG0210|consen 1017 LWKVTVITLVSCLPLYFIKALRRKLSP 1043 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 445677888889999999999998755
No 20
>KOG0209|consensus
Probab=100.00 E-value=5.3e-47 Score=395.98 Aligned_cols=510 Identities=20% Similarity=0.237 Sum_probs=375.4
Q ss_pred hhhhhcccccccccc-cccccceeeecCCCCCccccceEEEEccc-------------hh----hhhccccceeeecccc
Q psy16789 75 AVNEHYVRLKEYPFS-SEQKMMAVRCIPKEGSSCDVDTRFFFLHR-------------LL----EVGCVCNNASIIGDSL 136 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~-s~~k~m~v~~~~~~gt~~~~~~~~~~~kg-------------~~----ei~~lc~~a~~~~~~~ 136 (608)
.+.+.+....| ||- +-.+...++|.|||||+|.+.+.+--+.| ++ ++++.||.-...++.+
T Consensus 459 ALak~~vyCTE-PFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~l 537 (1160)
T KOG0209|consen 459 ALAKLGVYCTE-PFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKL 537 (1160)
T ss_pred HHHHhceeecC-ccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcc
Confidence 44455544443 443 44588999999999999988777765555 22 2778899877777789
Q ss_pred CCCccHHHHHHHHHHcCccc--------cccccccceeeeCChHHHHHHhHhhhcC------CcCCCCchhHHHHh----
Q psy16789 137 LGQPTEGALLAAGMKFGLYA--------VNEHYVRLKEYPFSSEQKMMAVRVHKIG------HNLPSKRDGKMILS---- 198 (608)
Q Consensus 137 ~gdp~E~Al~~~~~~~~~~~--------~~~~~~~~~~~pF~s~~k~m~v~~~~~~------~~~~~kg~~~~~~~---- 198 (608)
.|||.|.|.++...|.--.. .....++++.+.|+|..|||++++...+ +....|||+|.+-+
T Consensus 538 VGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d 617 (1160)
T KOG0209|consen 538 VGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD 617 (1160)
T ss_pred cCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh
Confidence 99999999999886532111 1124577899999999999999986532 22378999995543
Q ss_pred ---hhhhhhHHHhhccCceEEEEEc----------------cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEE
Q psy16789 199 ---QSCSEYPKFQTLGKGLVAMARG----------------SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLV 259 (608)
Q Consensus 199 ---~~~~~~~~~~~~g~r~l~~a~~----------------~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~ 259 (608)
++.+.+.+|+++|.||||++|| +.|+||+|.|++.+..|+|++++++|++|++.+++++|+
T Consensus 618 vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMI 697 (1160)
T KOG0209|consen 618 VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMI 697 (1160)
T ss_pred CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEE
Confidence 5667788999999999999998 358999999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHcCCCCC-----------------------------------------CCccccchhhcccCH-HHH
Q psy16789 260 TGDGQETATAIASMVGLDTI-----------------------------------------HGKVLSGDQIDQMTE-HQL 297 (608)
Q Consensus 260 TGd~~~ta~~ia~~~gi~~~-----------------------------------------~~~vi~g~~~~~~~~-~~~ 297 (608)
||||+.||.++|+++|+... ++.+++|+.++++.. +.+
T Consensus 698 TGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l 777 (1160)
T KOG0209|consen 698 TGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQL 777 (1160)
T ss_pred eCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHH
Confidence 99999999999999998432 134567777776543 457
Q ss_pred HHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHH------------------
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVC------------------ 359 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a------------------ 359 (608)
..++.++.||+|+.|.||..++..+++.|+.++|||||.||+.|+|+||||||+- ++....
T Consensus 778 ~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~ 856 (1160)
T KOG0209|consen 778 RRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAK 856 (1160)
T ss_pred HHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCchh
Confidence 7888999999999999999999999999999999999999999999999999985 222210
Q ss_pred -----------------------------------------------------HhccCEEEecCCcchHHHHHHHHHHHH
Q psy16789 360 -----------------------------------------------------KEAADMILVDDDFNTIIAAIEEGKGIF 386 (608)
Q Consensus 360 -----------------------------------------------------~~~ad~v~~~~~~~~i~~~i~~gR~~~ 386 (608)
.-||.+.....+.+++.+.|++||+..
T Consensus 857 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctL 936 (1160)
T KOG0209|consen 857 QTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTL 936 (1160)
T ss_pred hHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhH
Confidence 114566666667888999999999998
Q ss_pred HhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHH
Q psy16789 387 YNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALV 466 (608)
Q Consensus 387 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~ 466 (608)
-+.-+ .|.+..--+.+..+..+.++--+.-|++.|....-+++.. .-+.+...+|-+++.+..|. ..+||...+
T Consensus 937 VtTlQ--MfKILALN~LisAYslSvlyldGVKfgD~QaTisGlLla~-cFlfISrskPLetLSkeRP~---~nIFN~Y~i 1010 (1160)
T KOG0209|consen 937 VTTLQ--MFKILALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAA-CFLFISRSKPLETLSKERPL---PNIFNVYII 1010 (1160)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHH-HHhheecCCchhhHhhcCCC---CCcchHHHH
Confidence 55544 3444333344555666666666778999998887777655 34667778999999988884 468999989
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccc----------cccc-cchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHH
Q psy16789 467 VNVLMSASIIIVGTLYVFKREMSDNI----------VSKR-DTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFL 535 (608)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~ 535 (608)
..++.|-.++....+++......... +.+. .+|..|..-...|+.. |... ....+|+.++..|+.++
T Consensus 1011 ~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsT-FAVN-Y~G~PF~Esl~eNK~l~ 1088 (1160)
T KOG0209|consen 1011 LSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVST-FAVN-YQGRPFRESLRENKGLL 1088 (1160)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHH-hhhh-ccCcchhhhhhhccchH
Confidence 88888888877666655433221111 1111 2233333333333332 2222 23568888999999988
Q ss_pred HHHHHHHHHHHH--HhcccccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy16789 536 FAVCASVVGQLF--VIYFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICER 594 (608)
Q Consensus 536 ~~~~~~i~~~~~--ii~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~ 594 (608)
++++++..+.+. .-+.|.++..|.+.+++-.+-..+++...+-++.++++..+-+.+.+
T Consensus 1089 y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1089 YGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred HHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888776655443 33578888999999998776666666555556666655555444444
No 21
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.1e-46 Score=410.91 Aligned_cols=305 Identities=23% Similarity=0.264 Sum_probs=257.1
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE---ccchh--hh---hccccceeeecc
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF---LHRLL--EV---GCVCNNASIIGD 134 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~---~kg~~--ei---~~lc~~a~~~~~ 134 (608)
+++..+...|..++.+++..++..+.-++.+.++++|.|||||+|+++..... ..|.. ++ ..+|+.+
T Consensus 266 ~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~~~~----- 340 (673)
T PRK14010 266 GLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIA----- 340 (673)
T ss_pred HHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHhcCC-----
Confidence 44555556677888999999999999999999999999999999996544322 33331 22 2345431
Q ss_pred ccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhhh-----------hh
Q psy16789 135 SLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSC-----------SE 203 (608)
Q Consensus 135 ~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~~-----------~~ 203 (608)
..+|++.|+++++++.++... ....+.+||++++|+|++.+++ ....||+++.+++.|. +.
T Consensus 341 --s~~P~~~AIv~~a~~~~~~~~---~~~~~~~pF~~~~k~~gv~~~g---~~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 341 --DDTPEGRSIVKLAYKQHIDLP---QEVGEYIPFTAETRMSGVKFTT---REVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred --CCChHHHHHHHHHHHcCCCch---hhhcceeccccccceeEEEECC---EEEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 248999999999988765321 1223458999999999986432 2345999988876553 33
Q ss_pred hHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCcc
Q psy16789 204 YPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKV 283 (608)
Q Consensus 204 ~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~v 283 (608)
.++++++|+|+++++. |++++|+++++||+|++++++|++||++||+++|+|||++.||.++|+++|++.
T Consensus 413 ~~~~a~~G~~~l~v~~-----~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----- 482 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-----DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----- 482 (673)
T ss_pred HHHHHhCCCeEEEEEE-----CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----
Confidence 4678899999999874 679999999999999999999999999999999999999999999999999974
Q ss_pred ccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhcc
Q psy16789 284 LSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAA 363 (608)
Q Consensus 284 i~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~a 363 (608)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||+ +|++.+|++|
T Consensus 483 ----------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAA 539 (673)
T PRK14010 483 ----------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAA 539 (673)
T ss_pred ----------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhC
Confidence 89999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHh
Q psy16789 364 DMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLL 413 (608)
Q Consensus 364 d~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 413 (608)
|+++.+++|..+.+++++||++|.|+++++.|.+..|++.++..+...+.
T Consensus 540 DiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 540 NLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred CEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999977666554443
No 22
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.5e-43 Score=386.81 Aligned_cols=306 Identities=25% Similarity=0.314 Sum_probs=250.4
Q ss_pred HHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE---ccchhh--h---hccccceeeeccccC
Q psy16789 66 AAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF---LHRLLE--V---GCVCNNASIIGDSLL 137 (608)
Q Consensus 66 ~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~---~kg~~e--i---~~lc~~a~~~~~~~~ 137 (608)
..+...|..++.+++..++....-++.+..+++|.|||||+|++++.... ..|..+ + ..+|+.+ .
T Consensus 269 ~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~s~~-------s 341 (679)
T PRK01122 269 SAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLSSLA-------D 341 (679)
T ss_pred HHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHhcCC-------C
Confidence 33334466788899999999999999999999999999999998876543 334322 2 2344332 1
Q ss_pred CCccHHHHHHHHHH-cCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhh-----------hhhhH
Q psy16789 138 GQPTEGALLAAGMK-FGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQS-----------CSEYP 205 (608)
Q Consensus 138 gdp~E~Al~~~~~~-~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~-----------~~~~~ 205 (608)
-+|...|+++++++ .+....+..|+..+.+||++++|+|++.++ ...+.||+++.+++.| .+..+
T Consensus 342 ~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~---g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~ 418 (679)
T PRK01122 342 ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLD---GREIRKGAVDAIRRYVESNGGHFPAELDAAVD 418 (679)
T ss_pred CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEEC---CEEEEECCHHHHHHHHHhcCCcChHHHHHHHH
Confidence 25888999999987 344332233567788999999888887542 2457889988776654 33456
Q ss_pred HHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCcccc
Q psy16789 206 KFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLS 285 (608)
Q Consensus 206 ~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~ 285 (608)
+++++|.|++++|+ |++++|+++++|++|+++++++++||++||+++|+|||++.||.++|+++|+++
T Consensus 419 ~~a~~G~~~l~va~-----~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------- 486 (679)
T PRK01122 419 EVARKGGTPLVVAE-----DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------- 486 (679)
T ss_pred HHHhCCCcEEEEEE-----CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-------
Confidence 78999999999996 568999999999999999999999999999999999999999999999999964
Q ss_pred chhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCE
Q psy16789 286 GDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADM 365 (608)
Q Consensus 286 g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~ 365 (608)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||+ +|++.+|++||+
T Consensus 487 --------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADi 545 (679)
T PRK01122 487 --------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNM 545 (679)
T ss_pred --------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCE
Confidence 89999999999999999999999999999999999999999999999 999999999999
Q ss_pred EEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHH---HHHHHHHHHHhc
Q psy16789 366 ILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIA---ALSLIALATLLR 414 (608)
Q Consensus 366 v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~ 414 (608)
++.++||..+.+++++||+..-.-.....|++..-++ .+++..+...++
T Consensus 546 VLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~ 597 (679)
T PRK01122 546 VDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYP 597 (679)
T ss_pred EEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCc
Confidence 9999999999999999999985444556777664443 455555554443
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.2e-40 Score=360.99 Aligned_cols=292 Identities=22% Similarity=0.304 Sum_probs=247.9
Q ss_pred cCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cchhh--hh---ccccceeeeccccCCCccH
Q psy16789 71 FGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRLLE--VG---CVCNNASIIGDSLLGQPTE 142 (608)
Q Consensus 71 ~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~~e--i~---~lc~~a~~~~~~~~gdp~E 142 (608)
.|+.++.+++..++.....++.+..+++|.|||||+|+|++.+..+ +|..+ ++ .+|+.+ ..+|++
T Consensus 275 ag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~~~~-------s~hP~a 347 (675)
T TIGR01497 275 AGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLA-------DDTPEG 347 (675)
T ss_pred HHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHhcCC-------CCCcHH
Confidence 4567888999999999999999999999999999999998766433 34322 33 334331 246899
Q ss_pred HHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhh-----------hhhhhHHHhhcc
Q psy16789 143 GALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQ-----------SCSEYPKFQTLG 211 (608)
Q Consensus 143 ~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~-----------~~~~~~~~~~~g 211 (608)
.|+++++++.+.......++..+..||++++|+|++.+.+ ...+.||+++.+++. +.+.+++++++|
T Consensus 348 ~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~--g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G 425 (675)
T TIGR01497 348 KSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDN--GRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQG 425 (675)
T ss_pred HHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeC--CeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCC
Confidence 9999999987764433344567789999998777654322 245788998766543 344567889999
Q ss_pred CceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcc
Q psy16789 212 KGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQ 291 (608)
Q Consensus 212 ~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~ 291 (608)
.|++++|++ .+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+++
T Consensus 426 ~r~l~va~~-----~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------------- 487 (675)
T TIGR01497 426 GTPLVVCED-----NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------------- 487 (675)
T ss_pred CeEEEEEEC-----CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------
Confidence 999999974 58999999999999999999999999999999999999999999999999964
Q ss_pred cCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC
Q psy16789 292 MTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD 371 (608)
Q Consensus 292 ~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~ 371 (608)
++++++|++|.++++.+|++|+.|+|+|||.||+|||++||+||||+ +|++.++++||+++.+++
T Consensus 488 --------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~ 552 (675)
T TIGR01497 488 --------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSD 552 (675)
T ss_pred --------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCC
Confidence 78999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHH
Q psy16789 372 FNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAAL 404 (608)
Q Consensus 372 ~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~ 404 (608)
|..+.+++++||+++.+......|++...++-.
T Consensus 553 ~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~ 585 (675)
T TIGR01497 553 PTKLIEVVHIGKQLLITRGALTTFSIANDVAKY 585 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeecccHHHH
Confidence 999999999999999888888999988776633
No 24
>KOG0205|consensus
Probab=100.00 E-value=1.2e-38 Score=326.36 Aligned_cols=372 Identities=27% Similarity=0.346 Sum_probs=297.9
Q ss_pred HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceE-----E-EEccchhh--hhccccceeeecc
Q psy16789 63 ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTR-----F-FFLHRLLE--VGCVCNNASIIGD 134 (608)
Q Consensus 63 All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~-----~-~~~kg~~e--i~~lc~~a~~~~~ 134 (608)
+++...++.|..++.++..+++++...++..-|.++|.|||||+|.|+.. + +++||... ++-.+..|+..
T Consensus 295 tVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~-- 372 (942)
T KOG0205|consen 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRK-- 372 (942)
T ss_pred eeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhh--
Confidence 57777788888889999999999999999999999999999999866421 3 67788654 44333333322
Q ss_pred ccCCCccHHHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcC--CcCCCCchhHHHHhhhh----------h
Q psy16789 135 SLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIG--HNLPSKRDGKMILSQSC----------S 202 (608)
Q Consensus 135 ~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~--~~~~~kg~~~~~~~~~~----------~ 202 (608)
-..|..|.|++...... ...+..|+.++..||+...||....+.++. .....||+++.+++-|+ +
T Consensus 373 -en~DAID~A~v~~L~dP--Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~ 449 (942)
T KOG0205|consen 373 -ENQDAIDAAIVGMLADP--KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHS 449 (942)
T ss_pred -cChhhHHHHHHHhhcCH--HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHH
Confidence 23689999999887652 445678899999999999999887665433 33488999998887554 5
Q ss_pred hhHHHhhccCceEEEEEcc--------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc
Q psy16789 203 EYPKFQTLGKGLVAMARGS--------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV 274 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~--------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~ 274 (608)
.+++|+++|+|-+++|++. ......|+|+..+-||||.++.++|+.....|.+|.|+|||...-++..++++
T Consensus 450 ~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrl 529 (942)
T KOG0205|consen 450 IIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (942)
T ss_pred HHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhh
Confidence 6889999999999999985 23568999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC--ccccchh-hcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 275 GLDTIHG--KVLSGDQ-IDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 275 gi~~~~~--~vi~g~~-~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
|+-..-. .-+-|.+ -+.+...++++.+.+..-|+.+.|++|.++|+.+|++++.++|+|||.||+|++|+||+||++
T Consensus 530 gmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiav 609 (942)
T KOG0205|consen 530 GMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAV 609 (942)
T ss_pred ccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceee
Confidence 9865321 1111111 122233345666777788999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHH
Q psy16789 352 GKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIM 431 (608)
Q Consensus 352 ~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 431 (608)
. .+++.++.++|+|+++...+-++.++..+|.+|+|++.+..|.+..++-.++...+..+. +...|+|...+++-++.
T Consensus 610 a-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alI-w~~df~pfmvliiailn 687 (942)
T KOG0205|consen 610 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALI-WEFDFSPFMVLIIAILN 687 (942)
T ss_pred c-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHhc
Confidence 9 999999999999999999999999999999999999999999988887755332222222 23567888888888777
Q ss_pred hhhhHhhhccC
Q psy16789 432 DGPPAQSLGVE 442 (608)
Q Consensus 432 ~~~~~~~l~~~ 442 (608)
|.. .++++.+
T Consensus 688 d~t-~mtis~d 697 (942)
T KOG0205|consen 688 DGT-IMTISKD 697 (942)
T ss_pred CCc-eEEEEcc
Confidence 764 3444443
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.5e-34 Score=314.56 Aligned_cols=273 Identities=34% Similarity=0.503 Sum_probs=236.9
Q ss_pred chhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhhhhccccceeeeccccCCCccHHHHHHHHHHc
Q psy16789 73 LYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF 152 (608)
Q Consensus 73 ~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~ei~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~ 152 (608)
..++.++...++.....++.+.+.++|.|||||+|++++.+..+.... .+...++|+|.|+++++++.
T Consensus 208 ~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~------------~~~~s~hp~~~ai~~~~~~~ 275 (499)
T TIGR01494 208 DARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLG------------GEYLSGHPDERALVKSAKWK 275 (499)
T ss_pred HHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecC------------CCcCCCChHHHHHHHHhhhc
Confidence 346667788999999999999999999999999999888765432110 02456899999999998752
Q ss_pred CccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhh---hhhhHHHhhccCceEEEEEccCCCCceEE
Q psy16789 153 GLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQS---CSEYPKFQTLGKGLVAMARGSNLQDLCYM 229 (608)
Q Consensus 153 ~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~---~~~~~~~~~~g~r~l~~a~~~~e~~l~~~ 229 (608)
.....||++.+|+|+++++..+ ..+.||+++.+.+.| .+..++++.+|+|++++|++. .++
T Consensus 276 ----------~~~~~~f~~~~~~~~~~~~~~~-~~~~~G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~-----~~~ 339 (499)
T TIGR01494 276 ----------ILNVFEFSSVRKRMSVIVRGPD-GTYVKGAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKE-----TLL 339 (499)
T ss_pred ----------CcceeccCCCCceEEEEEecCC-cEEEeCCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECC-----eEE
Confidence 2356899999999998876522 246789998887765 334566888999999999876 799
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR 309 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r 309 (608)
|++.++|++|++++++|+.|+++|++++|+|||+..++..+|+++|+ +++
T Consensus 340 g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------------------------------~~~ 389 (499)
T TIGR01494 340 GLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------------------------------FAR 389 (499)
T ss_pred EEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------------------------------eec
Confidence 99999999999999999999999999999999999999999999987 477
Q ss_pred eCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhh
Q psy16789 310 VTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNI 389 (608)
Q Consensus 310 ~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i 389 (608)
.+|++|.++|+.+|+.|+.|+|+|||.||++|+++||+||+|+ ++++||+++.++++..+..++++||+.+.++
T Consensus 390 ~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i 463 (499)
T TIGR01494 390 VTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTI 463 (499)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999996 6889999999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHH
Q psy16789 390 RNFVRFQLSTSIAALSLIAL 409 (608)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~ 409 (608)
++++.|.+.+|+..+.+.+.
T Consensus 464 ~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 464 KSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987666554
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-32 Score=300.61 Aligned_cols=288 Identities=27% Similarity=0.364 Sum_probs=227.2
Q ss_pred hhhhhcccccccccccccccceeeecCCCCCccccceEEEEccch--h--hhhccccceeeeccccCCCccHHHHHHHHH
Q psy16789 75 AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRL--L--EVGCVCNNASIIGDSLLGQPTEGALLAAGM 150 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~--~--ei~~lc~~a~~~~~~~~gdp~E~Al~~~~~ 150 (608)
.-.++...++.-.+-+..+...+++.|||||+|+++..+.-+... . |++.+.... +.....|.-.|++++++
T Consensus 385 ~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~~e~~~L~laAal----E~~S~HPiA~AIv~~a~ 460 (713)
T COG2217 385 RAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDGDEDELLALAAAL----EQHSEHPLAKAIVKAAA 460 (713)
T ss_pred HHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCCCHHHHHHHHHHH----HhcCCChHHHHHHHHHH
Confidence 345677788888888999999999999999999998888766543 2 255444332 22346899999999988
Q ss_pred HcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHh------hhhhhhHHHhhccCceEEEEEccCCC
Q psy16789 151 KFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILS------QSCSEYPKFQTLGKGLVAMARGSNLQ 224 (608)
Q Consensus 151 ~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~------~~~~~~~~~~~~g~r~l~~a~~~~e~ 224 (608)
..+.... +..+++| -.++.-+-++. ...-|...-+-+ ...+..+.+..+|..++.++...
T Consensus 461 ~~~~~~~----~~~~~i~------G~Gv~~~v~g~-~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg--- 526 (713)
T COG2217 461 ERGLPDV----EDFEEIP------GRGVEAEVDGE-RVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDG--- 526 (713)
T ss_pred hcCCCCc----cceeeec------cCcEEEEECCE-EEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECC---
Confidence 7663221 1122222 01111000000 011111111110 12345677788898888888764
Q ss_pred CceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcc
Q psy16789 225 DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304 (608)
Q Consensus 225 ~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 304 (608)
.++|+++++|++|++++++|++||+.|++++|+|||+..+|.++|+++||++
T Consensus 527 --~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-------------------------- 578 (713)
T COG2217 527 --KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-------------------------- 578 (713)
T ss_pred --EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh--------------------------
Confidence 8899999999999999999999999999999999999999999999999975
Q ss_pred eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHH
Q psy16789 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKG 384 (608)
Q Consensus 305 ~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~ 384 (608)
+++.+.|++|.++|+.+|++|++|+|+|||.||+|||++|||||||| .|++.++++||+++.++++..+.++++.+|+
T Consensus 579 -v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~ 656 (713)
T COG2217 579 -VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRA 656 (713)
T ss_pred -heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999 7999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHH
Q psy16789 385 IFYNIRNFVRFQLSTSIAALSLIALA 410 (608)
Q Consensus 385 ~~~~i~~~~~~~~~~~~~~~~~~~~~ 410 (608)
++++|++++.|.+.+|...+.....+
T Consensus 657 t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 657 TRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998877665555
No 27
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-33 Score=277.22 Aligned_cols=313 Identities=25% Similarity=0.354 Sum_probs=250.6
Q ss_pred HHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccc---eEEEEccchhh--hhccccceeeecccc
Q psy16789 62 GALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVD---TRFFFLHRLLE--VGCVCNNASIIGDSL 136 (608)
Q Consensus 62 ~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~---~~~~~~kg~~e--i~~lc~~a~~~~~~~ 136 (608)
++||....-.|++++.+-+.+...--..+.-+-..++.-|||||+|-++ ..+...+|..+ ....|..+++.++
T Consensus 266 GgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~De-- 343 (681)
T COG2216 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLADE-- 343 (681)
T ss_pred HHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhccC--
Confidence 3666666666777877777777777788888999999999999998433 45667788765 5555655555444
Q ss_pred CCCccHHHHHHHHHHcCccccccccc-cceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHh-----------hhhhhh
Q psy16789 137 LGQPTEGALLAAGMKFGLYAVNEHYV-RLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILS-----------QSCSEY 204 (608)
Q Consensus 137 ~gdp~E~Al~~~~~~~~~~~~~~~~~-~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~-----------~~~~~~ 204 (608)
.|.-..++++|++.+.....+... ....+||+.+.|+.++...+. ...-||+...+.+ +++...
T Consensus 344 --TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~ 419 (681)
T COG2216 344 --TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAV 419 (681)
T ss_pred --CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCCCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHH
Confidence 456688999999987654333333 346789999998887765433 4466888775544 355667
Q ss_pred HHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccc
Q psy16789 205 PKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVL 284 (608)
Q Consensus 205 ~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi 284 (608)
++-++.|-..|+++... .++|++.++|-++++.+|-+.+||+.|||.+|+||||+.||..||++.|+++
T Consensus 420 ~~vs~~GGTPL~V~~~~-----~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------ 488 (681)
T COG2216 420 DEVSRLGGTPLVVVENG-----RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------ 488 (681)
T ss_pred HHHHhcCCCceEEEECC-----EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------
Confidence 88899999999998754 8899999999999999999999999999999999999999999999999987
Q ss_pred cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC
Q psy16789 285 SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364 (608)
Q Consensus 285 ~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad 364 (608)
..+.++|++|.+.++.-|..|+-|+|+|||.||+||+.+||||+||. +|++.||++++
T Consensus 489 ---------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaN 546 (681)
T COG2216 489 ---------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAAN 546 (681)
T ss_pred ---------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhc
Confidence 55788999999999999999999999999999999999999999999 99999999999
Q ss_pred EEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHH---HHHHHHHHHHh
Q psy16789 365 MILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIA---ALSLIALATLL 413 (608)
Q Consensus 365 ~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~ 413 (608)
.|=.|.|...+.+.++.|++.+-.=-..-.|++..-++ .+++..+...+
T Consensus 547 MVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~ 598 (681)
T COG2216 547 MVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAY 598 (681)
T ss_pred ccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999874333344566543333 44455544444
No 28
>KOG0207|consensus
Probab=99.97 E-value=3e-30 Score=276.66 Aligned_cols=302 Identities=25% Similarity=0.303 Sum_probs=222.8
Q ss_pred hhcccccccccccccccceeeecCCCCCccccceEEEEccchhh------hhccccceeeeccccCCCccHHHHHHHHHH
Q psy16789 78 EHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE------VGCVCNNASIIGDSLLGQPTEGALLAAGMK 151 (608)
Q Consensus 78 ~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e------i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~ 151 (608)
++..+++.-..-+......+++.|||||+|+++..+..++-..+ .+.+...+ +.....|.-.|+++||++
T Consensus 565 ~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~----Es~SeHPig~AIv~yak~ 640 (951)
T KOG0207|consen 565 TNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAM----ESGSEHPIGKAIVDYAKE 640 (951)
T ss_pred hcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHH----hcCCcCchHHHHHHHHHh
Confidence 44555655555556666778889999999988766655433222 22222211 123457999999999998
Q ss_pred cCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHH-------HHhhhhhhhHHHhhccCceEEEEEccCCC
Q psy16789 152 FGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKM-------ILSQSCSEYPKFQTLGKGLVAMARGSNLQ 224 (608)
Q Consensus 152 ~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~-------~~~~~~~~~~~~~~~g~r~l~~a~~~~e~ 224 (608)
.......+. ......|..+-+. +-+.-.+.. ..-|..+- +.++..+.+++....|..+..++...
T Consensus 641 ~~~~~~~~~--~~~~~~~pg~g~~--~~~~~~~~~-i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~--- 712 (951)
T KOG0207|consen 641 KLVEPNPEG--VLSFEYFPGEGIY--VTVTVDGNE-VLIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNG--- 712 (951)
T ss_pred cccccCccc--cceeecccCCCcc--cceEEeeeE-EeechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECC---
Confidence 762211110 1111111111111 111100000 11111111 11234455666678899999998875
Q ss_pred CceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcc
Q psy16789 225 DLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSV 304 (608)
Q Consensus 225 ~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 304 (608)
.+.|++.++|++|+|+..+|+.||+.||+++|+||||..+|..+|+++|++.
T Consensus 713 --~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~-------------------------- 764 (951)
T KOG0207|consen 713 --QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN-------------------------- 764 (951)
T ss_pred --EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce--------------------------
Confidence 7899999999999999999999999999999999999999999999999765
Q ss_pred eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHH
Q psy16789 305 TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKG 384 (608)
Q Consensus 305 ~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~ 384 (608)
|++...|+||.+.|+.+|+++..|+|+|||.||+|||.+|||||+++ .|++.|.++||+++..+++..++.+|+.+|+
T Consensus 765 -V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrk 842 (951)
T KOG0207|consen 765 -VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRK 842 (951)
T ss_pred -EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999 8899999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHH
Q psy16789 385 IFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAM 422 (608)
Q Consensus 385 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (608)
...|++.++.|.+++|+..+. ...+.|.+++..+.|+
T Consensus 843 t~~rIk~N~~~A~~yn~~~Ip-IAagvF~P~~~~L~Pw 879 (951)
T KOG0207|consen 843 TVKRIKLNFVWALIYNLVGIP-IAAGVFAPFGIVLPPW 879 (951)
T ss_pred HHhhHHHHHHHHHHHHHhhhh-hheecccCCccccCch
Confidence 999999999999999988764 3444555555334443
No 29
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=99.97 E-value=1.5e-30 Score=292.71 Aligned_cols=284 Identities=24% Similarity=0.310 Sum_probs=223.9
Q ss_pred hhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cchhh--hhccccceeeeccccCCCccHHHHHHHH
Q psy16789 75 AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRLLE--VGCVCNNASIIGDSLLGQPTEGALLAAG 149 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~~e--i~~lc~~a~~~~~~~~gdp~E~Al~~~~ 149 (608)
...++...++....-+..+.+.++|.|||||+|++++.+..+ ++..+ ++.++..+ .....+|.+.|+++++
T Consensus 416 ~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa~~----e~~s~hPia~Ai~~~a 491 (741)
T PRK11033 416 AAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAAAV----EQGSTHPLAQAIVREA 491 (741)
T ss_pred HHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHHHHHHH----hcCCCCHHHHHHHHHH
Confidence 345777889999999999999999999999999998776543 33322 44444321 1234689999999999
Q ss_pred HHcCccccccccccceeeeCChHHHHHHhH-hhh--cCCcCCCCchhHHH---HhhhhhhhHHHhhccCceEEEEEccCC
Q psy16789 150 MKFGLYAVNEHYVRLKEYPFSSEQKMMAVR-VHK--IGHNLPSKRDGKMI---LSQSCSEYPKFQTLGKGLVAMARGSNL 223 (608)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~-~~~--~~~~~~~kg~~~~~---~~~~~~~~~~~~~~g~r~l~~a~~~~e 223 (608)
++.+.. +|+.++.+.+... ++. .+.. ..-|+.+.+ -++..+.++++..+|.++++++++
T Consensus 492 ~~~~~~-----------~~~~~~~~~~~g~Gv~~~~~g~~-~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~--- 556 (741)
T PRK11033 492 QVRGLA-----------IPEAESQRALAGSGIEGQVNGER-VLICAPGKLPPLADAFAGQINELESAGKTVVLVLRN--- 556 (741)
T ss_pred HhcCCC-----------CCCCcceEEEeeEEEEEEECCEE-EEEecchhhhhccHHHHHHHHHHHhCCCEEEEEEEC---
Confidence 876542 2444443333110 110 0110 111222222 123444567788999999999974
Q ss_pred CCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhc
Q psy16789 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNS 303 (608)
Q Consensus 224 ~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 303 (608)
..++|+++++|++|++++++|+.|+++|++++|+|||+..++..+|+++|+..
T Consensus 557 --~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~------------------------- 609 (741)
T PRK11033 557 --DDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF------------------------- 609 (741)
T ss_pred --CEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe-------------------------
Confidence 58999999999999999999999999999999999999999999999999952
Q ss_pred ceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHH
Q psy16789 304 VTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGK 383 (608)
Q Consensus 304 ~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR 383 (608)
+++..|++|.++++.+|+. +.|+|+|||.||+||+++||+||+|+ ++++.++++||+++.++++.++.++++.||
T Consensus 610 ---~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr 684 (741)
T PRK11033 610 ---RAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSR 684 (741)
T ss_pred ---ecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHH
Confidence 3456799999999999965 58999999999999999999999999 899999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhhHHHHHHHHHH
Q psy16789 384 GIFYNIRNFVRFQLSTSIAALSLIAL 409 (608)
Q Consensus 384 ~~~~~i~~~~~~~~~~~~~~~~~~~~ 409 (608)
+++.||++++.|.+.+|...+...++
T Consensus 685 ~~~~~I~~nl~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 685 ATHANIRQNITIALGLKAIFLVTTLL 710 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876655443
No 30
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.96 E-value=1.1e-28 Score=271.17 Aligned_cols=294 Identities=27% Similarity=0.375 Sum_probs=229.9
Q ss_pred CchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cch---hh-hhccccceeeeccccCCCccHHH
Q psy16789 72 GLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRL---LE-VGCVCNNASIIGDSLLGQPTEGA 144 (608)
Q Consensus 72 g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~---~e-i~~lc~~a~~~~~~~~gdp~E~A 144 (608)
+...+.++...++....-+..+.+.++|.|||||+|++++.+..+ .+. .+ ++.+|..+. ....+|++.|
T Consensus 223 ~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e----~~~~hp~~~A 298 (556)
T TIGR01525 223 AIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALE----QSSSHPLARA 298 (556)
T ss_pred HHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHh----ccCCChHHHH
Confidence 345677888999999999999999999999999999998776543 222 23 555554332 2356899999
Q ss_pred HHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHH------HhhhhhhhHHHhhccCceEEEE
Q psy16789 145 LLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMI------LSQSCSEYPKFQTLGKGLVAMA 218 (608)
Q Consensus 145 l~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~------~~~~~~~~~~~~~~g~r~l~~a 218 (608)
+++++++.+..... .+ ...++|- +.....++ +......|+.+.+ .++..+.++.++++|+|++.++
T Consensus 299 i~~~~~~~~~~~~~-~~-~~~~~~~----~gi~~~~~--g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 370 (556)
T TIGR01525 299 IVRYAKKRGLELPK-QE-DVEEVPG----KGVEATVD--GQEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVA 370 (556)
T ss_pred HHHHHHhcCCCccc-cc-CeeEecC----CeEEEEEC--CeeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEE
Confidence 99999987654311 00 1111110 00011111 1001111222211 1112234566788999999998
Q ss_pred EccCCCCceEEEEeeecCCCChhHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHH
Q psy16789 219 RGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSG-VKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQL 297 (608)
Q Consensus 219 ~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~ 297 (608)
+. .+++|.+.++|+++++++++|++|+++| +++.++|||+..++..+++++|+..
T Consensus 371 ~~-----~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------------------- 426 (556)
T TIGR01525 371 VD-----GELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------------------- 426 (556)
T ss_pred EC-----CEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-------------------
Confidence 64 4899999999999999999999999999 9999999999999999999999964
Q ss_pred HHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
+|+++.|++|.++++.+++.++.|+|+|||.||++|++.||+|++++ ++++.+++.||+++.++++..+.+
T Consensus 427 --------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~ 497 (556)
T TIGR01525 427 --------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPT 497 (556)
T ss_pred --------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHH
Confidence 67788899999999999999999999999999999999999999999 889999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHH
Q psy16789 378 AIEEGKGIFYNIRNFVRFQLSTSIAALSLIALA 410 (608)
Q Consensus 378 ~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~ 410 (608)
+++.||+++.|+++++.|.+.+|+..+.+.+.+
T Consensus 498 ~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 498 AIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987655443
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.96 E-value=1.5e-27 Score=260.61 Aligned_cols=286 Identities=27% Similarity=0.361 Sum_probs=221.9
Q ss_pred CchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhhhhccccceeeeccccCCCccHHHHHHHHHH
Q psy16789 72 GLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMK 151 (608)
Q Consensus 72 g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~ei~~lc~~a~~~~~~~~gdp~E~Al~~~~~~ 151 (608)
+..++.++...+++...-+..+.+.++|.|||||+|++++.+..+... +++..+... +....+|.+.|+++++++
T Consensus 223 ~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~-~~l~~a~~~----e~~~~hp~~~Ai~~~~~~ 297 (536)
T TIGR01512 223 AISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA-EVLRLAAAA----EQASSHPLARAIVDYARK 297 (536)
T ss_pred HHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-HHHHHHHHH----hccCCCcHHHHHHHHHHh
Confidence 345677888899999999999999999999999999998887655332 333332211 123468999999999886
Q ss_pred cCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEE
Q psy16789 152 FGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGL 231 (608)
Q Consensus 152 ~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~ 231 (608)
.+ ......+.|- +.+...++ +.. ..-|+.+.+.+. ....+..+|.+++.++. |..++|.
T Consensus 298 ~~------~~~~~~~~~g----~gi~~~~~--g~~-~~ig~~~~~~~~---~~~~~~~~~~~~~~v~~-----~~~~~g~ 356 (536)
T TIGR01512 298 RE------NVESVEEVPG----EGVRAVVD--GGE-VRIGNPRSLEAA---VGARPESAGKTIVHVAR-----DGTYLGY 356 (536)
T ss_pred cC------CCcceEEecC----CeEEEEEC--CeE-EEEcCHHHHhhc---CCcchhhCCCeEEEEEE-----CCEEEEE
Confidence 53 1111222221 00000001 111 111222221111 11245667878777764 4689999
Q ss_pred eeecCCCChhHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 232 VGICDPPRPHVRECMSTLLQSGV-KVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 232 ~~~~d~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
+.++|++|++++++|+.|+++|+ ++.++|||+..++..+++++|+.. +|++.
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~ 409 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAEL 409 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhcc
Confidence 99999999999999999999999 999999999999999999999964 56677
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHhhh
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYNIR 390 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~ 390 (608)
.|++|.++++.+++.++.|+|+|||.||++|++.||+|++++.++++.++++||+++.++++..+.++++.||+++++++
T Consensus 410 ~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~ 489 (536)
T TIGR01512 410 LPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVK 489 (536)
T ss_pred CcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999866889999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHH
Q psy16789 391 NFVRFQLSTSIAALSLIALA 410 (608)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~ 410 (608)
+++.|.+.+|+..+.+.+++
T Consensus 490 ~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 490 QNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999998877665543
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.95 E-value=1.2e-26 Score=266.29 Aligned_cols=287 Identities=23% Similarity=0.285 Sum_probs=223.8
Q ss_pred hhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---cchhh--hhccccceeeeccccCCCccHHHHHHH
Q psy16789 74 YAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---HRLLE--VGCVCNNASIIGDSLLGQPTEGALLAA 148 (608)
Q Consensus 74 ~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---kg~~e--i~~lc~~a~~~~~~~~gdp~E~Al~~~ 148 (608)
....++...++....-+..+.+.++|.|||||+|+++..+... .+..+ ++.++..+ .....+|++.|++++
T Consensus 496 ~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~----e~~s~hp~a~Ai~~~ 571 (834)
T PRK10671 496 GRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALRLAAAL----EQGSSHPLARAILDK 571 (834)
T ss_pred HHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCCCHHHHHHHHHHH----hCCCCCHHHHHHHHH
Confidence 4566888899999999999999999999999999998776533 33222 33222111 122468999999998
Q ss_pred HHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHH------hhhhhhhHHHhhccCceEEEEEccC
Q psy16789 149 GMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMIL------SQSCSEYPKFQTLGKGLVAMARGSN 222 (608)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~------~~~~~~~~~~~~~g~r~l~~a~~~~ 222 (608)
+....... ..+++...-...+ ..+ ++. ....|+.+.+. ++..+.++.+..+|.+++.++++.
T Consensus 572 ~~~~~~~~-~~~~~~~~g~Gv~-------~~~--~g~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~- 639 (834)
T PRK10671 572 AGDMTLPQ-VNGFRTLRGLGVS-------GEA--EGH-ALLLGNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDG- 639 (834)
T ss_pred HhhCCCCC-cccceEecceEEE-------EEE--CCE-EEEEeCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECC-
Confidence 86432211 0111100000000 000 011 11223333221 234445677788999999998754
Q ss_pred CCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhh
Q psy16789 223 LQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVN 302 (608)
Q Consensus 223 e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 302 (608)
.++|.+.+.|++|++++++|++|++.|++++|+|||+..++..+++++|+..
T Consensus 640 ----~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------ 691 (834)
T PRK10671 640 ----KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------ 691 (834)
T ss_pred ----EEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------
Confidence 7899999999999999999999999999999999999999999999999964
Q ss_pred cceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHH
Q psy16789 303 SVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382 (608)
Q Consensus 303 ~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~g 382 (608)
++++..|++|.++++.++.+++.|+|+|||.||++|++.||+||+|| ++++.++++||+++.++++.++.++++.|
T Consensus 692 ---~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~ 767 (834)
T PRK10671 692 ---VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAIS 767 (834)
T ss_pred ---EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 67888899999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhHHHHHHHHH
Q psy16789 383 KGIFYNIRNFVRFQLSTSIAALSLIA 408 (608)
Q Consensus 383 R~~~~~i~~~~~~~~~~~~~~~~~~~ 408 (608)
|..+.++++++.|.+.+|+..+.+..
T Consensus 768 r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 768 RATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988776543
No 33
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.95 E-value=5.6e-27 Score=256.96 Aligned_cols=287 Identities=24% Similarity=0.344 Sum_probs=219.3
Q ss_pred hhhhhhcccccccccccccccceeeecCCCCCccccceEEEEcc---chh--hhhccccceeeeccccCCCccHHHHHHH
Q psy16789 74 YAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLH---RLL--EVGCVCNNASIIGDSLLGQPTEGALLAA 148 (608)
Q Consensus 74 ~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~k---g~~--ei~~lc~~a~~~~~~~~gdp~E~Al~~~ 148 (608)
....++...++....-+..+.+.++|.|||||+|+++..+..+. +.. +++.++..+. ....+|.+.|++++
T Consensus 256 ~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~l~~aa~~e----~~s~HPia~Ai~~~ 331 (562)
T TIGR01511 256 GLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRDRTELLALAAALE----AGSEHPLAKAIVSY 331 (562)
T ss_pred HHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCCHHHHHHHHHHHh----ccCCChHHHHHHHH
Confidence 45667888899999999999999999999999999887765442 222 2454443221 12358999999999
Q ss_pred HHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceE
Q psy16789 149 GMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCY 228 (608)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~ 228 (608)
+++.+.... +.+...++| .+.+...+++ .....|+..-+ ++....+.+..++|.+++.++. |.++
T Consensus 332 ~~~~~~~~~--~~~~~~~~~----g~Gi~~~~~g---~~~~iG~~~~~-~~~~~~~~~~~~~g~~~~~~~~-----~~~~ 396 (562)
T TIGR01511 332 AKEKGITLV--EVSDFKAIP----GIGVEGTVEG---TKIQLGNEKLL-GENAIKIDGKAEQGSTSVLVAV-----NGEL 396 (562)
T ss_pred HHhcCCCcC--CCCCeEEEC----CceEEEEECC---EEEEEECHHHH-HhCCCCCChhhhCCCEEEEEEE-----CCEE
Confidence 987654321 111111111 0000000110 00111222221 1111112334578888888765 4589
Q ss_pred EEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE
Q psy16789 229 MGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 229 ~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
+|.+.++|++|++++++|++|++.|+++.|+|||+..++..+++++|++ +++
T Consensus 397 ~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------------------~~~ 448 (562)
T TIGR01511 397 AGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------------------VRA 448 (562)
T ss_pred EEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc----------------------------EEc
Confidence 9999999999999999999999999999999999999999999999994 456
Q ss_pred EeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHHHHHh
Q psy16789 309 RVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKGIFYN 388 (608)
Q Consensus 309 r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~~~~~ 388 (608)
+..|++|.++++.++++++.|+|+|||.||++|+++||+||+++ ++++.++++||+++.++++..+.++++.+|+++++
T Consensus 449 ~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~ 527 (562)
T TIGR01511 449 EVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRR 527 (562)
T ss_pred cCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 67799999999999999999999999999999999999999999 78999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHHHH
Q psy16789 389 IRNFVRFQLSTSIAALSLIA 408 (608)
Q Consensus 389 i~~~~~~~~~~~~~~~~~~~ 408 (608)
+++++.|.+.+|+..+...+
T Consensus 528 i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 528 IKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988665444
No 34
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.92 E-value=8.9e-25 Score=206.11 Aligned_cols=173 Identities=37% Similarity=0.637 Sum_probs=147.4
Q ss_pred CCchhHHHHHHHHHHHhhhhHhhhccCCCCccccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhhcccc-ccc-
Q psy16789 416 PNPLNAMQILWINIIMDGPPAQSLGVEPVDDDVKIQKPRNVKEPMITRALVVNVLMSASIIIVGTLYVFKREMSD-NIV- 493 (608)
Q Consensus 416 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 493 (608)
|.|+++.|+||+|+++|.+|+++++.||||+++|++||+++++++++++++..++.+|++.++.++..|+..... +..
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 679999999999999999999999999999999999999999999999999999999999888888877655431 111
Q ss_pred ------ccccchhhHHHHHHHHHHHHHHhhccccceee-eCCccchHHHHHHHHHHHHHHHHhcccccccccccccCChh
Q psy16789 494 ------SKRDTTMTFTCFVFFDMFNALSCRSQIKSVFT-IGLFTNKMFLFAVCASVVGQLFVIYFPPLQKVFQTEALTIN 566 (608)
Q Consensus 494 ------~~~~~t~~f~~lv~~~l~~~~~~~~~~~~~f~-~~~~~N~~~~~~~~~~i~~~~~ii~~p~l~~~f~~~~l~~~ 566 (608)
...++|++|.+++++|+++.+++|+.+.+.|+ .++++|++++.+++++++++++++|+|+++..|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 12379999999999999999999998888888 78889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy16789 567 DIAFLTALTSTVFFVSEIKKAI 588 (608)
Q Consensus 567 ~w~~~~~~~~~~~~~~~l~K~~ 588 (608)
+|+++++++++.++++|++|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999985
No 35
>KOG4383|consensus
Probab=99.75 E-value=1.1e-17 Score=172.88 Aligned_cols=378 Identities=16% Similarity=0.177 Sum_probs=237.3
Q ss_pred CCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcc------------
Q psy16789 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQ------------ 291 (608)
Q Consensus 224 ~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~------------ 291 (608)
++.+|.|++....+.+.+....|+.|-++-||.+..|-++....+..|+++|++..++..|+-.+-.+
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 78899999999999999999999999999999999999999999999999999765543332111000
Q ss_pred ------------------------cC----------------------------------------HHHHHHHhhcceEE
Q psy16789 292 ------------------------MT----------------------------------------EHQLQQVVNSVTVF 307 (608)
Q Consensus 292 ------------------------~~----------------------------------------~~~~~~~~~~~~v~ 307 (608)
+. .++++++..-+.+|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 00 01223333334589
Q ss_pred EEeCchhHHHHHHHHHHCCCEEEEEcCCcC--cHHHHHhCCeeEEeCCCCcHH--------------H------------
Q psy16789 308 YRVTPRHKLTIVKAFQANGVIVGMTGDGVN--DGVALKKADIGIAMGKQGTDV--------------C------------ 359 (608)
Q Consensus 308 ~r~~p~~K~~~v~~l~~~g~~v~~~GDg~N--D~~al~~A~vgia~~~~~~~~--------------a------------ 359 (608)
.+++|+.-.++++.+|++|+++++.|...| ..-.+-+||++|++..-..+. |
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiS 1052 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQIS 1052 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeec
Confidence 999999999999999999999999999987 344566799999985311111 0
Q ss_pred ----HhccCEEEecCCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhh
Q psy16789 360 ----KEAADMILVDDDFNTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPP 435 (608)
Q Consensus 360 ----~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 435 (608)
.-+.|+.......-.+..+|+.+|.....+|+++.|.+.+.+......+++.++..|..|+-.+++|+.++..++.
T Consensus 1053 gqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL 1132 (1354)
T KOG4383|consen 1053 GQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLL 1132 (1354)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHH
Confidence 1123444433345567888999999999999999999999999999999999999999999999999999998877
Q ss_pred Hhh-hccCCCCccccccC-CC-------CCCCCCcchHHHHHHHHHHHH--HHHH-HHHhhhhcc---c--------ccc
Q psy16789 436 AQS-LGVEPVDDDVKIQK-PR-------NVKEPMITRALVVNVLMSASI--IIVG-TLYVFKREM---S--------DNI 492 (608)
Q Consensus 436 ~~~-l~~~~~~~~~~~~~-P~-------~~~~~l~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~---~--------~~~ 492 (608)
.+. +-..++.+.+|.+. |. +.+..++....+ +....+.. +.++ .+..+--.+ + ++.
T Consensus 1133 ~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFil-kFsls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S 1211 (1354)
T KOG4383|consen 1133 FIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFIL-KFSLSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGS 1211 (1354)
T ss_pred HHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHhhhhhccccccceeeccCCC
Confidence 666 43455555555433 21 111111111111 11111111 1111 111111110 0 000
Q ss_pred cccc--------------cchhhHHHHHHHHHHHHHHhhccccceeeeCCccchHHHHHH---------HHHHHHHHHHh
Q psy16789 493 VSKR--------------DTTMTFTCFVFFDMFNALSCRSQIKSVFTIGLFTNKMFLFAV---------CASVVGQLFVI 549 (608)
Q Consensus 493 ~~~~--------------~~t~~f~~lv~~~l~~~~~~~~~~~~~f~~~~~~N~~~~~~~---------~~~i~~~~~ii 549 (608)
...+ ++...-.-.+.-.++..+...+..++.++....+|.||-+.+ ...+.+|+..-
T Consensus 1212 ~ddqa~a~FedfangL~saQkl~aa~iilH~ifiqIThih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~th 1291 (1354)
T KOG4383|consen 1212 ADDQALAEFEDFANGLGSAQKLLAAEIILHIIFIQITHIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTH 1291 (1354)
T ss_pred cCcccchhHHHHHhhhhhHHHHHHHHHHHHhheeEEEEEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhc
Confidence 0000 011111111111222222333334555555555665543332 22222222222
Q ss_pred cccccccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q psy16789 550 YFPPLQKVFQTEALTINDIAFLTALTSTVFFVSEIKKAIERICERKCLRSSKKQSMDF 607 (608)
Q Consensus 550 ~~p~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~~~~~~~r~~~~~~ 607 (608)
+-. +--|+....|+..|++.++...++.+.+|++|..+-+.+.+ ++|||+|+|
T Consensus 1292 rd~--~VHfgldd~pLL~~~igcisi~iiVitNEiiKiheIR~~~R---~QkRqK~eF 1344 (1354)
T KOG4383|consen 1292 RDR--GVHFGLDDFPLLPLGIGCISICIIVITNEIIKIHEIRQFTR---EQKRQKFEF 1344 (1354)
T ss_pred ccc--ceeeccccchhHHHHHHHHheeeeeehhhHHHHHHHHHHHH---HHHhhhhee
Confidence 221 23466666788889888888888888999999887776664 677777765
No 36
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.73 E-value=1.3e-17 Score=161.65 Aligned_cols=109 Identities=42% Similarity=0.693 Sum_probs=97.5
Q ss_pred hhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccch
Q psy16789 208 QTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGD 287 (608)
Q Consensus 208 ~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~ 287 (608)
...|...+.++. ++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||...
T Consensus 103 ~~~~~~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~-------- 169 (215)
T PF00702_consen 103 ESQGRTVIVLAV-----NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS-------- 169 (215)
T ss_dssp HHHHHHCEEEEE-----SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE--------
T ss_pred HhhCCcccceee-----cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc--------
Confidence 445555555554 6799999999999999999999999999999999999999999999999999432
Q ss_pred hhcccCHHHHHHHhhcceEEEEe--CchhH--HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCC
Q psy16789 288 QIDQMTEHQLQQVVNSVTVFYRV--TPRHK--LTIVKAFQANGVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~r~--~p~~K--~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~ 346 (608)
.++++. +|++| .++++.++..+..|+|+|||.||++|+++||
T Consensus 170 -----------------~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 -----------------IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----------------EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----------------cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 388999 99999 9999999977779999999999999999997
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.54 E-value=3.4e-14 Score=118.37 Aligned_cols=117 Identities=25% Similarity=0.322 Sum_probs=105.1
Q ss_pred ceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcce
Q psy16789 226 LCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVT 305 (608)
Q Consensus 226 l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 305 (608)
....+.++--.++-++++++|++|++. +++.+.|||..-+....|+..|++...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 356788888899999999999999999 999999999999999999999987653
Q ss_pred EEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCC--CCcHHHHhccCEEEe
Q psy16789 306 VFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGK--QGTDVCKEAADMILV 368 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~--~~~~~a~~~ad~v~~ 368 (608)
+++-..|+.|..+++.+++.++.|.|+|||.||.+|+++||+||+.-+ +..+.+.++||+++.
T Consensus 73 v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 788888999999999999999999999999999999999999998742 345666789999886
No 38
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.50 E-value=2.5e-14 Score=117.38 Aligned_cols=79 Identities=32% Similarity=0.514 Sum_probs=67.5
Q ss_pred hhhhceeeeCC------ccccCchHHHHHHHHHhcCc----hhhhhhcccccccccccccccceeeecCCCCCccccceE
Q psy16789 43 CVCNNASIIGD------SLLGQPTEGALLAAGMKFGL----YAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTR 112 (608)
Q Consensus 43 ~l~n~a~~~~~------~~~G~pte~All~~~~~~g~----~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~ 112 (608)
+|||++.+..+ +..|||||.||+.++.++|. ...+..++++.++||+|+||+|+|+++ + +...
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~-----~~~~ 73 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--N-----DGKY 73 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--C-----CCEE
Confidence 58999998532 27899999999999999964 478899999999999999999999998 2 2346
Q ss_pred EEEccchhh-hhccccc
Q psy16789 113 FFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 113 ~~~~kg~~e-i~~lc~~ 128 (608)
++++||++| ++..|+.
T Consensus 74 ~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 74 ILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEcCCChHHHHHhcCC
Confidence 779999999 9999975
No 39
>KOG0202|consensus
Probab=99.46 E-value=1.9e-13 Score=146.63 Aligned_cols=127 Identities=26% Similarity=0.343 Sum_probs=96.0
Q ss_pred cccceeeeecCccceecccccCcCCCC------------CCCchHHHHHHHHhhhhhceeeeCCcc-----ccCchHHHH
Q psy16789 2 KLFDLIRLEFRPSFLEKVHGDGRNSSR------------IRSKPETGTLLEVGCVCNNASIIGDSL-----LGQPTEGAL 64 (608)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~~l~n~a~~~~~~~-----~G~pte~Al 64 (608)
|+|..+..+-.. .-++++|.+|.+.+ ..+.+.+.++++++++||++.+..++. +|+|||+||
T Consensus 352 ~i~~~~~~~~~~-~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL 430 (972)
T KOG0202|consen 352 KIFIPDGGTATV-DEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGAL 430 (972)
T ss_pred EEEecccccccc-cccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHH
Confidence 344444443332 22455677766554 235578999999999999999886665 999999999
Q ss_pred HHHHHhcCchhhh-----------------hhcccccccccccccccceeeecCCCCCccccceEEEEccchhh-hhccc
Q psy16789 65 LAAGMKFGLYAVN-----------------EHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVC 126 (608)
Q Consensus 65 l~~~~~~g~~~~~-----------------~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc 126 (608)
..++.|+|+.+.+ +.++++.++||+|+||+|++.|.++.+. ..+..|+||++| ++..|
T Consensus 431 ~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~----~~~~~fvKGA~E~Vl~rc 506 (972)
T KOG0202|consen 431 IVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQ----SGYKMFVKGAPESVLERC 506 (972)
T ss_pred HHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCC----ccceEEecCChHHHHHhh
Confidence 9999999985422 3345669999999999999999987753 456889999999 99999
Q ss_pred cceeeec
Q psy16789 127 NNASIIG 133 (608)
Q Consensus 127 ~~a~~~~ 133 (608)
++.....
T Consensus 507 s~~~~~~ 513 (972)
T KOG0202|consen 507 STYYGSD 513 (972)
T ss_pred hcEEccC
Confidence 8765544
No 40
>PLN03190 aminophospholipid translocase; Provisional
Probab=99.30 E-value=2e-10 Score=134.92 Aligned_cols=123 Identities=20% Similarity=0.206 Sum_probs=87.9
Q ss_pred HHHHHHHHhhhhhceeee--CC---------cccc-CchHHHHHHHHHhcCc--------------hhhhhhcccccccc
Q psy16789 34 ETGTLLEVGCVCNNASII--GD---------SLLG-QPTEGALLAAGMKFGL--------------YAVNEHYVRLKEYP 87 (608)
Q Consensus 34 ~~~~ll~~~~l~n~a~~~--~~---------~~~G-~pte~All~~~~~~g~--------------~~~~~~~~~v~~~p 87 (608)
...+++.+.++||++... .+ .+.| +|+|.||+.+|.+.|+ ...++++++++++|
T Consensus 531 ~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~p 610 (1178)
T PLN03190 531 HVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHE 610 (1178)
T ss_pred HHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEec
Confidence 356789999999998763 11 1445 9999999999999985 24567889999999
Q ss_pred cccccccceeeecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCcccccccccccee
Q psy16789 88 FSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKE 166 (608)
Q Consensus 88 F~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~ 166 (608)
|+|+||+|+|++++++++ ..+++||++| ++.+|+.... ...-...+..+-++|. .|++...-.|+.+..
T Consensus 611 F~S~rKrMSvIv~~~~~~------~~l~~KGA~e~il~~~~~~~~---~~~~~~~~~~l~~~a~-~GlRtL~lA~k~l~~ 680 (1178)
T PLN03190 611 FDSDRKRMSVILGCPDKT------VKVFVKGADTSMFSVIDRSLN---MNVIRATEAHLHTYSS-LGLRTLVVGMRELND 680 (1178)
T ss_pred ccccccEEEEEEEcCCCc------EEEEEecCcHHHHHhhccccc---chhHHHHHHHHHHHHh-cCCceEEEEEEeCCH
Confidence 999999999999875543 6899999999 8899975210 0011224455555654 377665545555543
No 41
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.30 E-value=5.7e-13 Score=109.32 Aligned_cols=79 Identities=37% Similarity=0.543 Sum_probs=65.5
Q ss_pred ccccceeeecc------ccCCCccHHHHHHHHHHcCcc----ccccccccceeeeCChHHHHHHhHhhhcCCc-CCCCch
Q psy16789 124 CVCNNASIIGD------SLLGQPTEGALLAAGMKFGLY----AVNEHYVRLKEYPFSSEQKMMAVRVHKIGHN-LPSKRD 192 (608)
Q Consensus 124 ~lc~~a~~~~~------~~~gdp~E~Al~~~~~~~~~~----~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~-~~~kg~ 192 (608)
++||++.+..+ ...|||+|.||++++.+.|.. ..+..|++++++||||++|+|++++++.+.. +++|||
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~~~~~~~~~~KGA 80 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVRNDGKYILYVKGA 80 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEeCCCEEEEEcCCC
Confidence 48999887332 289999999999999998643 3567899999999999999999999744434 499999
Q ss_pred hHHHHhhhhh
Q psy16789 193 GKMILSQSCS 202 (608)
Q Consensus 193 ~~~~~~~~~~ 202 (608)
++.++++|..
T Consensus 81 ~e~il~~Ct~ 90 (91)
T PF13246_consen 81 PEVILDRCTH 90 (91)
T ss_pred hHHHHHhcCC
Confidence 9999998864
No 42
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.26 E-value=5.1e-11 Score=119.75 Aligned_cols=67 Identities=31% Similarity=0.347 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..|+++|||.||.+|++.|++|+||+ |+.+.+|+.||+|..+++-+++.++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 566666665543 3 45999999999999999999999999 9999999999999999999999998854
No 43
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.25 E-value=9e-11 Score=117.50 Aligned_cols=151 Identities=26% Similarity=0.349 Sum_probs=108.3
Q ss_pred EEeeecCC-CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-----------Cccccchhhc-------
Q psy16789 230 GLVGICDP-PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-----------GKVLSGDQID------- 290 (608)
Q Consensus 230 G~~~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-----------~~vi~g~~~~------- 290 (608)
|++.-.+. +.+.+.++|+++++.|++++++|||+...+..+.+++++..+. +.++....++
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 8999999999999999999999999999999999999996420 0000000000
Q ss_pred ---------------------------------------------------------c---cCHHHHHHHhh-----cce
Q psy16789 291 ---------------------------------------------------------Q---MTEHQLQQVVN-----SVT 305 (608)
Q Consensus 291 ---------------------------------------------------------~---~~~~~~~~~~~-----~~~ 305 (608)
. ...+++...+. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 00111111111 111
Q ss_pred EEE-------EeCch--hHHHHHHHHHH-CCC---EEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCc
Q psy16789 306 VFY-------RVTPR--HKLTIVKAFQA-NGV---IVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDF 372 (608)
Q Consensus 306 v~~-------r~~p~--~K~~~v~~l~~-~g~---~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~ 372 (608)
.+. ...|. +|...++.+.+ .|. .|+++||+.||.+||+.|+.||||+ |+.+.+|+.||++..+++.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccc
Confidence 222 22332 78888887766 354 4999999999999999999999999 9999999999999899999
Q ss_pred chHHHHHHH
Q psy16789 373 NTIIAAIEE 381 (608)
Q Consensus 373 ~~i~~~i~~ 381 (608)
+|+.++|++
T Consensus 251 ~Gv~~~l~~ 259 (264)
T COG0561 251 DGVAEALEK 259 (264)
T ss_pred hHHHHHHHH
Confidence 999999865
No 44
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.23 E-value=5.8e-11 Score=119.41 Aligned_cols=143 Identities=17% Similarity=0.240 Sum_probs=100.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CCccc-c--ch-----hh---------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HGKVL-S--GD-----QI--------------- 289 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~~vi-~--g~-----~~--------------- 289 (608)
.+.+.+.++|++++++|++++++|||+...+..+.+++|+..+ ++..+ + +. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 4889999999999999999999999999999999999998432 10000 0 00 00
Q ss_pred -------------------------------------ccc------------CHHH---HHHHhh-----cceE------
Q psy16789 290 -------------------------------------DQM------------TEHQ---LQQVVN-----SVTV------ 306 (608)
Q Consensus 290 -------------------------------------~~~------------~~~~---~~~~~~-----~~~v------ 306 (608)
... .+++ +.+.+. ...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000 0011 111110 0111
Q ss_pred EEEeCch--hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCE--EEecCCcchHHHH
Q psy16789 307 FYRVTPR--HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADM--ILVDDDFNTIIAA 378 (608)
Q Consensus 307 ~~r~~p~--~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~--v~~~~~~~~i~~~ 378 (608)
+...+|. .|...++.+.+. | ..|+++|||.||.+||+.|+.|+||+ |+.+.+|++||+ ++.+++.+|+.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 1123333 577777776554 3 45999999999999999999999999 999999999996 7778899999998
Q ss_pred HH
Q psy16789 379 IE 380 (608)
Q Consensus 379 i~ 380 (608)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 85
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.22 E-value=1.1e-10 Score=114.40 Aligned_cols=151 Identities=23% Similarity=0.283 Sum_probs=106.1
Q ss_pred EEeeecCC-CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CCc-ccc---chh-----hc-----
Q psy16789 230 GLVGICDP-PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HGK-VLS---GDQ-----ID----- 290 (608)
Q Consensus 230 G~~~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~~-vi~---g~~-----~~----- 290 (608)
|++.-.|. +.+.+.++|++++++|++++++|||+...+..+.+.+|+..+ ++. +.. +.. ++
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 44443444 778999999999999999999999999999999999998532 111 110 000 00
Q ss_pred -------------------------------ccCHHHHHHHhhcc----eE-----EEEeCch--hHHHHHHHHHHC-C-
Q psy16789 291 -------------------------------QMTEHQLQQVVNSV----TV-----FYRVTPR--HKLTIVKAFQAN-G- 326 (608)
Q Consensus 291 -------------------------------~~~~~~~~~~~~~~----~v-----~~r~~p~--~K~~~v~~l~~~-g- 326 (608)
....+++.+.+.+. .+ +....|. .|...++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00011122222111 11 1233333 477777766543 3
Q ss_pred --CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 327 --VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 327 --~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..++++||+.||.+|++.|++|++|+ |+.+.+|+.||++..+++-+|+.++|++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 45999999999999999999999999 9999999999999999999999998853
No 46
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.21 E-value=3.5e-09 Score=122.69 Aligned_cols=94 Identities=30% Similarity=0.435 Sum_probs=77.5
Q ss_pred CCchHHHHHHHHhhhhhceeeeC--CccccCchHHHHHHHHHhcCc--h--hhhhhcccccccccccccccceeeecCCC
Q psy16789 30 RSKPETGTLLEVGCVCNNASIIG--DSLLGQPTEGALLAAGMKFGL--Y--AVNEHYVRLKEYPFSSEQKMMAVRCIPKE 103 (608)
Q Consensus 30 ~~~~~~~~ll~~~~l~n~a~~~~--~~~~G~pte~All~~~~~~g~--~--~~~~~~~~v~~~pF~s~~k~m~v~~~~~~ 103 (608)
..++...+++..+++||++.... +...|||||.||++++.+.|. . .++..+++++++||+|+||+|++++++++
T Consensus 384 ~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~ 463 (917)
T COG0474 384 KDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDE 463 (917)
T ss_pred ccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCC
Confidence 34456667899999999988654 345899999999999999886 3 56677889999999999999999998554
Q ss_pred CCccccceEEEEccchhh-hhccccce
Q psy16789 104 GSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 104 gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
|. +.+++||++| ++..|...
T Consensus 464 ~~------~~~~~KGApe~il~~~~~~ 484 (917)
T COG0474 464 GK------YILFVKGAPEVILERCKSI 484 (917)
T ss_pred Cc------EEEEEcCChHHHHHHhccc
Confidence 32 7899999999 88888763
No 47
>PRK10976 putative hydrolase; Provisional
Probab=99.20 E-value=1.4e-10 Score=116.23 Aligned_cols=67 Identities=21% Similarity=0.230 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC--EEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD--MILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad--~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..|+++||+.||.+||+.|+.|+||+ |+.+.+|+.|| +++.+++.+|+.++|++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 466666665543 3 35999999999999999999999999 99999999988 78888999999998853
No 48
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.18 E-value=1.7e-10 Score=111.80 Aligned_cols=142 Identities=19% Similarity=0.256 Sum_probs=101.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CC-ccccc-hhh--cc-----------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HG-KVLSG-DQI--DQ----------------- 291 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~-~vi~g-~~~--~~----------------- 291 (608)
++.+++.++|++++++|++++++|||+...+..+++.+++..+ ++ .+... ..+ ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 3889999999999999999999999999999999999998532 11 11110 000 00
Q ss_pred ------------------cCHHHHHHHhhcc--eE-----EEEeC--chhHHHHHHHHHHC-C---CEEEEEcCCcCcHH
Q psy16789 292 ------------------MTEHQLQQVVNSV--TV-----FYRVT--PRHKLTIVKAFQAN-G---VIVGMTGDGVNDGV 340 (608)
Q Consensus 292 ------------------~~~~~~~~~~~~~--~v-----~~r~~--p~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~ 340 (608)
...+.+.+.+.+. .+ +...+ ...|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011122222111 11 11222 34788888777653 3 35899999999999
Q ss_pred HHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 341 ALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 341 al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
|++.|++|++|+ |+.+.+|+.||++..+++-+++.++|
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999 99999999999999888888887653
No 49
>PLN02887 hydrolase family protein
Probab=99.14 E-value=3.6e-10 Score=122.95 Aligned_cols=67 Identities=33% Similarity=0.384 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+. | ..|+++|||.||.+||+.|++||||+ |+.+.+|+.||+|..+++.+||.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 344444444332 2 35999999999999999999999999 9999999999999999999999998863
No 50
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.13 E-value=5.6e-10 Score=112.33 Aligned_cols=67 Identities=30% Similarity=0.380 Sum_probs=56.4
Q ss_pred hHHHHHHHHHH-CC---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQA-NG---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~-~g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+ .| ..++++||+.||.+|++.|++|++|+ |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 46655554433 33 35999999999999999999999999 8999999999999999999999998853
No 51
>KOG0203|consensus
Probab=99.12 E-value=8.8e-12 Score=133.75 Aligned_cols=264 Identities=17% Similarity=0.165 Sum_probs=168.3
Q ss_pred ccCchHH--HHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc---------------cc
Q psy16789 56 LGQPTEG--ALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL---------------HR 118 (608)
Q Consensus 56 ~G~pte~--All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~---------------kg 118 (608)
+++-+|+ |.++.++.+-.++|++++..++.+...++.+..+++|.|++||+|||.+.+..+ +|
T Consensus 325 vAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~ 404 (1019)
T KOG0203|consen 325 VANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSG 404 (1019)
T ss_pred EecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhc
Confidence 4555565 444555555557889999999999999999999999999999999998877542 22
Q ss_pred ------------hhhhhccccceeeecc---------ccCCCccHHHHHHHHHHcC--ccccccccccceeeeCChHHHH
Q psy16789 119 ------------LLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFG--LYAVNEHYVRLKEYPFSSEQKM 175 (608)
Q Consensus 119 ------------~~ei~~lc~~a~~~~~---------~~~gdp~E~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ 175 (608)
...+..+||.|....+ ...||+.|.||+++++..- ....++.++.+.++||+|.+|.
T Consensus 405 ~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Ky 484 (1019)
T KOG0203|consen 405 QSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKY 484 (1019)
T ss_pred ccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccce
Confidence 1127789999887433 4789999999999998632 2345677889999999999999
Q ss_pred HHhHhhhc-----CCcCCCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHH
Q psy16789 176 MAVRVHKI-----GHNLPSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLL 250 (608)
Q Consensus 176 m~v~~~~~-----~~~~~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~ 250 (608)
...+-+.. ...+..||++|.++++|+...-...+. .+..+.+++..++-.++-
T Consensus 485 qlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~----------------------pld~~~~~~f~~ay~~lg 542 (1019)
T KOG0203|consen 485 QLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEK----------------------PLDEKLKEAFQEAYLELG 542 (1019)
T ss_pred EEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCC----------------------CcCHHHHHHHHHHHHHhh
Confidence 77654321 223478999999999998765331110 112233444555555555
Q ss_pred hCCCeEEEEcCCcHHHHHHHHHHcCCCC--CCCccccchhhcccCHHHHHHHhhcceEEEEeCch--hHHHHHHHHHHCC
Q psy16789 251 QSGVKVKLVTGDGQETATAIASMVGLDT--IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR--HKLTIVKAFQANG 326 (608)
Q Consensus 251 ~~Gi~v~~~TGd~~~ta~~ia~~~gi~~--~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~--~K~~~v~~l~~~g 326 (608)
..|-||. ..|...=... +.....+-+... ...+ .+..+...+-+.|. .-.+.|..|+..|
T Consensus 543 ~~GerVl-----------gF~~~~l~~~~~p~~~~f~~d~~n-~p~~----nl~FlGl~s~idPPR~~vP~Av~~CrsAG 606 (1019)
T KOG0203|consen 543 GLGERVL-----------GFCDLELPDEKFPRGFQFDTDDVN-FPTD----NLRFLGLISMIDPPRAAVPDAVGKCRSAG 606 (1019)
T ss_pred hcchHHH-----------HHHHHhcchhcCCCceEeecCCCC-Ccch----hccccchhhccCCCcccCchhhhhhhhhC
Confidence 5665543 2222111100 000011101100 0000 11112223333332 3347899999999
Q ss_pred CEEEE-EcCCcCcHHHHHhCCeeEEeCCCCcHH
Q psy16789 327 VIVGM-TGDGVNDGVALKKADIGIAMGKQGTDV 358 (608)
Q Consensus 327 ~~v~~-~GDg~ND~~al~~A~vgia~~~~~~~~ 358 (608)
.+|.| +||..-.+.|+. .+|||.-+++++..
T Consensus 607 IkvimVTgdhpiTAkAiA-~~vgIi~~~~et~e 638 (1019)
T KOG0203|consen 607 IKVIMVTGDHPITAKAIA-KSVGIISEGSETVE 638 (1019)
T ss_pred ceEEEEecCccchhhhhh-hheeeecCCchhhh
Confidence 98888 999999999998 78998876444433
No 52
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.11 E-value=8.5e-10 Score=107.65 Aligned_cols=143 Identities=20% Similarity=0.262 Sum_probs=100.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CC-ccccch--------hhcc------------
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HG-KVLSGD--------QIDQ------------ 291 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~-~vi~g~--------~~~~------------ 291 (608)
.+.+.+.++|++++++|++++++|||+...+..+.+.+|+..+ ++ .+...+ .+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 3778999999999999999999999999999999999996422 11 011000 0000
Q ss_pred ---------------------cCHHHHHHHhhcce----E-----EEEeCc--hhHHHHHHHHHHC-C---CEEEEEcCC
Q psy16789 292 ---------------------MTEHQLQQVVNSVT----V-----FYRVTP--RHKLTIVKAFQAN-G---VIVGMTGDG 335 (608)
Q Consensus 292 ---------------------~~~~~~~~~~~~~~----v-----~~r~~p--~~K~~~v~~l~~~-g---~~v~~~GDg 335 (608)
.+.+.+.....+.. + +....| ..|...++.+.+. | ..++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00111111111111 1 122233 3688777776553 3 469999999
Q ss_pred cCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch----HHHHHH
Q psy16789 336 VNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT----IIAAIE 380 (608)
Q Consensus 336 ~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~----i~~~i~ 380 (608)
.||.+|++.|++|++|+ |+.+.+|+.||+|..+++.++ +.+.++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999998889999 666654
No 53
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.11 E-value=6.3e-10 Score=110.21 Aligned_cols=143 Identities=25% Similarity=0.325 Sum_probs=101.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC------------CCccccchhhc-------------
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI------------HGKVLSGDQID------------- 290 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~------------~~~vi~g~~~~------------- 290 (608)
..+.+++.+++++++++|+++++.|||+...+..+.+++++..+ .+.++.-..++
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 44779999999999999999999999999999999999998521 00000000000
Q ss_pred -----------------c------------------------------------cCHH-------HHHHHhhcceEE---
Q psy16789 291 -----------------Q------------------------------------MTEH-------QLQQVVNSVTVF--- 307 (608)
Q Consensus 291 -----------------~------------------------------------~~~~-------~~~~~~~~~~v~--- 307 (608)
. .+.+ ++.+.......+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0 0011 112222211111
Q ss_pred ----EEeCc--hhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 308 ----YRVTP--RHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 308 ----~r~~p--~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
...+| ..|...++.+.+. ...++++||+.||.+|++.||.|++|+ |+.+..+..||+++...+-+++++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 12333 3788888877653 357999999999999999999999999 999999999999999887799987
Q ss_pred HH
Q psy16789 378 AI 379 (608)
Q Consensus 378 ~i 379 (608)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 65
No 54
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.06 E-value=1.1e-09 Score=104.42 Aligned_cols=131 Identities=18% Similarity=0.134 Sum_probs=95.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.+.|+.+++.| ++.++||.....+..+++++|+.......+..++-.. +... . ...++.|.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~---------~tG~-~--~~~~~~K~ 134 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR---------VVGY-Q--LRQKDPKR 134 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCe---------eECe-e--ecCcchHH
Confidence 57899999999999975 9999999999999999999999753321111000000 0000 0 13467899
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEG 382 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~g 382 (608)
..++.+++.|..+.++|||.||.+|++.||+|+++. +.+..+++||-.-.-.+.+.+...+.++
T Consensus 135 ~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 135 QSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 999999888888999999999999999999999996 6666666665433334666666666554
No 55
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.02 E-value=1.6e-09 Score=110.18 Aligned_cols=130 Identities=22% Similarity=0.269 Sum_probs=97.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE-EeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY-RVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~-r~~p~~K 315 (608)
++.+++.+.++.|++.|+++.++||.....+..+.+++|+...... .++-.. . .+. ..+.. -+..+.|
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an-----~lei~d-g----~lt-g~v~g~iv~~k~K 249 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN-----ELEIMD-G----KLT-GNVLGDIVDAQYK 249 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe-----EEEEEC-C----EEE-eEecCccCCcccH
Confidence 4789999999999999999999999998888899999998642111 000000 0 000 00000 0234578
Q ss_pred HHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 316 LTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 316 ~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.++.+.+. | ..+.++|||.||.+|++.||+|+++ |+.+..++.||.++...++++++.++
T Consensus 250 ~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 250 ADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred HHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 8888777654 3 5799999999999999999999999 78999999999999888888888765
No 56
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.97 E-value=9.7e-09 Score=102.27 Aligned_cols=151 Identities=17% Similarity=0.163 Sum_probs=99.0
Q ss_pred EEeeecCC-CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCC----CC-ccccchh--------h--cccC
Q psy16789 230 GLVGICDP-PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTI----HG-KVLSGDQ--------I--DQMT 293 (608)
Q Consensus 230 G~~~~~d~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~----~~-~vi~g~~--------~--~~~~ 293 (608)
|++.-.+. ..+.+.++|++++++|++++++|||+...+..+.+++|+..+ ++ .+..... + ..++
T Consensus 8 GTll~~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~ 87 (256)
T TIGR01486 8 GTLLDPHGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIP 87 (256)
T ss_pred CCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCC
Confidence 33333343 445789999999999999999999999999999999997432 11 1111100 0 0001
Q ss_pred HHH-----------------------------------------------------------HHHHhhc--ceE-----E
Q psy16789 294 EHQ-----------------------------------------------------------LQQVVNS--VTV-----F 307 (608)
Q Consensus 294 ~~~-----------------------------------------------------------~~~~~~~--~~v-----~ 307 (608)
.+. +.+.+.+ +.+ +
T Consensus 88 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 167 (256)
T TIGR01486 88 YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRF 167 (256)
T ss_pred HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCce
Confidence 000 0001110 111 1
Q ss_pred EEeCc--hhHHHHHHHHHHC------CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc---HHHHhc--c-CEEEecCCcc
Q psy16789 308 YRVTP--RHKLTIVKAFQAN------GVIVGMTGDGVNDGVALKKADIGIAMGKQGT---DVCKEA--A-DMILVDDDFN 373 (608)
Q Consensus 308 ~r~~p--~~K~~~v~~l~~~------g~~v~~~GDg~ND~~al~~A~vgia~~~~~~---~~a~~~--a-d~v~~~~~~~ 373 (608)
....| ..|...++.+.+. ...++++||+.||.+|++.||+|+||+ |+. +..|+. | +++..+++-+
T Consensus 168 ~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~d 246 (256)
T TIGR01486 168 YHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPE 246 (256)
T ss_pred EEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcH
Confidence 11222 2577666655433 456999999999999999999999999 776 468876 4 5888899999
Q ss_pred hHHHHHHH
Q psy16789 374 TIIAAIEE 381 (608)
Q Consensus 374 ~i~~~i~~ 381 (608)
|+.+++++
T Consensus 247 Gva~~l~~ 254 (256)
T TIGR01486 247 GWREALEH 254 (256)
T ss_pred HHHHHHHH
Confidence 99998864
No 57
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.95 E-value=4.9e-09 Score=104.44 Aligned_cols=65 Identities=28% Similarity=0.357 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.|...++.+.+. | ..++++||+.||.+|++.|++|++|+ ++.+.+|+.|++++.+++.+++.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 577777776654 2 45999999999999999999999998 89999999999999999999987653
No 58
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.95 E-value=3.2e-09 Score=97.59 Aligned_cols=107 Identities=16% Similarity=0.234 Sum_probs=83.0
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ 323 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~ 323 (608)
..|+.|+++|+++.++|+.+...+....+.+|+......+ ...|+....+++.++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~-------------------------kpkp~~~~~~~~~l~ 95 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI-------------------------KKKTEPYAQMLEEMN 95 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC-------------------------CCCHHHHHHHHHHcC
Confidence 4899999999999999999999999999999997422100 011222223333333
Q ss_pred HCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHH
Q psy16789 324 ANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTII 376 (608)
Q Consensus 324 ~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~ 376 (608)
-....++++||+.||.+|++.|+++++|+ |+.+.++..|++++..++-++.+
T Consensus 96 ~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 96 ISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred cCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCHH
Confidence 33457999999999999999999999999 99999999999998766655543
No 59
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.95 E-value=3.5e-07 Score=106.37 Aligned_cols=91 Identities=41% Similarity=0.695 Sum_probs=75.7
Q ss_pred hHHHHHHHHhhhhhceeeeCC--ccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccc
Q psy16789 33 PETGTLLEVGCVCNNASIIGD--SLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVD 110 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~--~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~ 110 (608)
+...+++.++++||++..... ...|||+|.|++.++.+.|....++.+++++++||+|++|+|++++.++. ++
T Consensus 379 ~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~-----~~ 453 (884)
T TIGR01522 379 VAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQ-----DR 453 (884)
T ss_pred HHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcC-----CC
Confidence 456788999999999876533 45799999999999999888766778899999999999999999987542 23
Q ss_pred eEEEEccchhh-hhccccc
Q psy16789 111 TRFFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 111 ~~~~~~kg~~e-i~~lc~~ 128 (608)
.+..++||++| ++..|+.
T Consensus 454 ~~~~~~KGape~il~~c~~ 472 (884)
T TIGR01522 454 SEMCFMKGAYEQVLKYCTY 472 (884)
T ss_pred eEEEEEeCChHHHHHhhhh
Confidence 46889999999 9999975
No 60
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=98.95 E-value=3.2e-08 Score=117.20 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=72.1
Q ss_pred hHHHHHHHHhhhhhceeeeC--Cc------cccCchHHHHHHHHHhcCchh----------------hhhhccccccccc
Q psy16789 33 PETGTLLEVGCVCNNASIIG--DS------LLGQPTEGALLAAGMKFGLYA----------------VNEHYVRLKEYPF 88 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~--~~------~~G~pte~All~~~~~~g~~~----------------~~~~~~~v~~~pF 88 (608)
+...+++.++++||++.... ++ ..|||+|.||+.+|.+.|..- ..+++++++++||
T Consensus 438 ~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF 517 (1057)
T TIGR01652 438 KRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEF 517 (1057)
T ss_pred HHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEeccc
Confidence 34677899999999987653 21 148999999999999998631 2246788999999
Q ss_pred ccccccceeeecCCCCCccccceEEEEccchhh-hhccccc
Q psy16789 89 SSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 89 ~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~ 128 (608)
+|+||+|++++++++| ...+++||++| ++.+|..
T Consensus 518 ~s~rKrmSviv~~~~~------~~~l~~KGA~e~il~~~~~ 552 (1057)
T TIGR01652 518 NSDRKRMSVIVRNPDG------RIKLLCKGADTVIFKRLSS 552 (1057)
T ss_pred CCCCCeEEEEEEeCCC------eEEEEEeCcHHHHHHHhhc
Confidence 9999999999987653 36789999999 8888874
No 61
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=98.94 E-value=8.6e-10 Score=129.06 Aligned_cols=92 Identities=28% Similarity=0.378 Sum_probs=73.0
Q ss_pred hHHHHHHHHhhhhhceeeeCC------ccccCchHHHHHHHHHhcCch--------hh-------------------hhh
Q psy16789 33 PETGTLLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLY--------AV-------------------NEH 79 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~------~~~G~pte~All~~~~~~g~~--------~~-------------------~~~ 79 (608)
+.+.+++.++++||++.+..+ ...|||||+||+.++.+.|.+ .. +.+
T Consensus 445 ~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1053)
T TIGR01523 445 DLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQ 524 (1053)
T ss_pred HHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccc
Confidence 346779999999999887532 357999999999999988862 11 234
Q ss_pred cccccccccccccccceeeecCCCCCccccceEEEEccchhh-hhccccce
Q psy16789 80 YVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 80 ~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
+++++++||+|+||+|++++++.++ ..+++++||++| ++..|+..
T Consensus 525 ~~~~~~~pFds~rK~msvv~~~~~~-----~~~~~~~KGApe~il~~c~~~ 570 (1053)
T TIGR01523 525 FEFIAEFPFDSEIKRMASIYEDNHG-----ETYNIYAKGAFERIIECCSSS 570 (1053)
T ss_pred cceEEEeccCCCCCeEEEEEEeCCC-----CEEEEEEeCChHHHHHhhhHh
Confidence 6789999999999999999875432 236789999999 99999753
No 62
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=98.91 E-value=3.4e-07 Score=107.20 Aligned_cols=90 Identities=29% Similarity=0.285 Sum_probs=70.9
Q ss_pred hHHHHHHHHhhhhhceeeeC------CccccCchHHHHHHHHHhcCch--hhhhhcccccccccccccccceeeecCCCC
Q psy16789 33 PETGTLLEVGCVCNNASIIG------DSLLGQPTEGALLAAGMKFGLY--AVNEHYVRLKEYPFSSEQKMMAVRCIPKEG 104 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~------~~~~G~pte~All~~~~~~g~~--~~~~~~~~v~~~pF~s~~k~m~v~~~~~~g 104 (608)
+...+++..+++||+..... ....|||+|.|++.++.+.|.+ ..++++++++++||+|++|+|++++...++
T Consensus 415 ~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~ 494 (941)
T TIGR01517 415 KHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGG 494 (941)
T ss_pred HHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCC
Confidence 44566778888888776432 1467999999999999887753 455677888999999999999999876432
Q ss_pred CccccceEEEEccchhh-hhccccc
Q psy16789 105 SSCDVDTRFFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 105 t~~~~~~~~~~~kg~~e-i~~lc~~ 128 (608)
.+.+++||++| ++..|+.
T Consensus 495 ------~~~~~~KGA~e~il~~c~~ 513 (941)
T TIGR01517 495 ------KVREFRKGASEIVLKPCRK 513 (941)
T ss_pred ------cEEEEEECChHHHHHhhhH
Confidence 36789999999 8899975
No 63
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.91 E-value=8.8e-07 Score=103.42 Aligned_cols=90 Identities=29% Similarity=0.429 Sum_probs=72.0
Q ss_pred hHHHHHHHHhhhhhceeeeCC------ccccCchHHHHHHHHHhcCchh------------------hhhhccccccccc
Q psy16789 33 PETGTLLEVGCVCNNASIIGD------SLLGQPTEGALLAAGMKFGLYA------------------VNEHYVRLKEYPF 88 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~------~~~G~pte~All~~~~~~g~~~------------------~~~~~~~v~~~pF 88 (608)
+...+++.++++||++.+..+ ...|||||.||+.++.+.|.+. .++++++++++||
T Consensus 349 ~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF 428 (917)
T TIGR01116 349 AGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEF 428 (917)
T ss_pred HHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeeccc
Confidence 346678899999999876532 2369999999999999887531 2456779999999
Q ss_pred ccccccceeeecCCCCCccccceEEEEccchhh-hhccccce
Q psy16789 89 SSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 89 ~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
+|+||+|++++++. +.+.+++||++| ++..|+..
T Consensus 429 ~s~rK~msviv~~~-------~~~~~~~KGApe~il~~c~~~ 463 (917)
T TIGR01116 429 SRDRKSMSVLCKPS-------TGNKLFVKGAPEGVLERCTHI 463 (917)
T ss_pred ChhhCeEEEEEeeC-------CcEEEEEcCChHHHHHhccce
Confidence 99999999998753 235789999999 99999753
No 64
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.90 E-value=2.1e-08 Score=100.68 Aligned_cols=143 Identities=14% Similarity=0.115 Sum_probs=95.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC-C----CC-ccccchh--------h-c-ccCHHH-----
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT-I----HG-KVLSGDQ--------I-D-QMTEHQ----- 296 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~-~----~~-~vi~g~~--------~-~-~~~~~~----- 296 (608)
+.+.+.++|++++++|++++++|||+...+..+.+++|+.. + ++ .+..... + . .++.+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 55789999999999999999999999999999999999842 1 11 1111100 0 0 011100
Q ss_pred --------------------------------------------------------HHHHhh--cceE-----EEEeCc-
Q psy16789 297 --------------------------------------------------------LQQVVN--SVTV-----FYRVTP- 312 (608)
Q Consensus 297 --------------------------------------------------------~~~~~~--~~~v-----~~r~~p- 312 (608)
+.+.+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 000000 0111 112233
Q ss_pred -hhHHHHHHHHHH-------CCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCc-HH-----HHhccCEEEecCCcchHHHH
Q psy16789 313 -RHKLTIVKAFQA-------NGVIVGMTGDGVNDGVALKKADIGIAMGKQGT-DV-----CKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 313 -~~K~~~v~~l~~-------~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~-~~-----a~~~ad~v~~~~~~~~i~~~ 378 (608)
..|...++.+.+ ....|+++||+.||.+||+.|++|+||+ ++. +. .+..+|++....+-+|+.++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 267766666544 3357999999999999999999999999 433 21 45578999998899999988
Q ss_pred HHH
Q psy16789 379 IEE 381 (608)
Q Consensus 379 i~~ 381 (608)
+++
T Consensus 264 l~~ 266 (271)
T PRK03669 264 LDH 266 (271)
T ss_pred HHH
Confidence 864
No 65
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.85 E-value=1.2e-08 Score=97.78 Aligned_cols=119 Identities=24% Similarity=0.262 Sum_probs=88.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE-EeCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY-RVTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~-r~~p~~ 314 (608)
.++++++.+.++.++++|.+|+++||-...-+..+++.+|++...+..+.-++ .... . .+.. .+..+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~lt---------G-~v~g~~~~~~~ 144 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLT---------G-RVVGPICDGEG 144 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEe---------c-eeeeeecCcch
Confidence 56789999999999999999999999999999999999999875433332221 0000 0 1222 344578
Q ss_pred HHHHHHHHHH-CCC---EEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEE
Q psy16789 315 KLTIVKAFQA-NGV---IVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMIL 367 (608)
Q Consensus 315 K~~~v~~l~~-~g~---~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~ 367 (608)
|.+.++.+.+ .|. .+.+.|||.||.||++.||.++++. +.+..+..|+...
T Consensus 145 K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 145 KAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred HHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 8888865554 465 4999999999999999999999996 5555556666544
No 66
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.85 E-value=1.5e-08 Score=92.45 Aligned_cols=106 Identities=18% Similarity=0.241 Sum_probs=83.6
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH-
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ- 323 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~- 323 (608)
+|++|+++|+++.++||++...+..+.+.+|+.... ++ ...|.+.++.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~----~~-------------------------~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY----QG-------------------------QSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE----ec-------------------------ccchHHHHHHHHH
Confidence 899999999999999999999999999999987521 11 123444444433
Q ss_pred H---CCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch-HHHHHH
Q psy16789 324 A---NGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT-IIAAIE 380 (608)
Q Consensus 324 ~---~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~-i~~~i~ 380 (608)
+ ....++++||+.||.+|++.|++++++. ++.+..+..|++++.++.-++ +.++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 2 2457999999999999999999999998 788889999999998776555 655553
No 67
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.81 E-value=2.5e-08 Score=96.90 Aligned_cols=129 Identities=24% Similarity=0.282 Sum_probs=93.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-eCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-VTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-~~p~~K 315 (608)
++.+++.+.++.|+++|+++.++||.....+..+.+.+|+.......+.-++ . .+. ..+... ..+..|
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~--~--------~~~-~~~~~~~~~~~~k 153 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVED--G--------KLT-GLVEGPIVDASYK 153 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEEC--C--------EEE-EEecCcccCCccc
Confidence 5789999999999999999999999999999999999999753221111000 0 000 000001 113346
Q ss_pred HHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcchHHHH
Q psy16789 316 LTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 316 ~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
..+++.+.+. + ..+.++||+.+|.++.+.||++++++ +.+..+++||+++.+.++..+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 7777765544 3 35889999999999999999999985 678888999999998887766543
No 68
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.75 E-value=1.4e-07 Score=94.88 Aligned_cols=67 Identities=21% Similarity=0.135 Sum_probs=54.2
Q ss_pred hHHHHHHHHHH----CC-CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHH----hcc-CEEE--ecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQA----NG-VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCK----EAA-DMIL--VDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~----~g-~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~----~~a-d~v~--~~~~~~~i~~~i~~ 381 (608)
.|...++.+.+ .. ..|+++||+.||.+|++.|++|++|+ |+.+.+| .+| +.+. ..++-+|+.++|++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 56666665553 24 78999999999999999999999999 9999999 666 5666 56678899888853
No 69
>KOG0204|consensus
Probab=98.71 E-value=4.4e-08 Score=106.02 Aligned_cols=94 Identities=31% Similarity=0.359 Sum_probs=78.7
Q ss_pred CCchHHHHHHHHhhhhhceeee--------CCccccCchHHHHHHHHHhcCc--hhhhhhcccccccccccccccceeee
Q psy16789 30 RSKPETGTLLEVGCVCNNASII--------GDSLLGQPTEGALLAAGMKFGL--YAVNEHYVRLKEYPFSSEQKMMAVRC 99 (608)
Q Consensus 30 ~~~~~~~~ll~~~~l~n~a~~~--------~~~~~G~pte~All~~~~~~g~--~~~~~~~~~v~~~pF~s~~k~m~v~~ 99 (608)
..++.+.+++..++..|+..-. ..+++|+|||+|||.++.++|. +.+|.+...++.+||+|+||+|.++.
T Consensus 472 ~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi 551 (1034)
T KOG0204|consen 472 NLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVI 551 (1034)
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEE
Confidence 4678899999999998864421 1147899999999999999987 47888889999999999999999999
Q ss_pred cCCCCCccccceEEEEccchhh-hhccccce
Q psy16789 100 IPKEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 100 ~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
..++|. .+ +++||+.| ++..|+.-
T Consensus 552 ~~~~~~-----~y-~~~KGAsEiVL~~C~~~ 576 (1034)
T KOG0204|consen 552 KLPDGG-----HY-VHWKGASEIVLKSCEYY 576 (1034)
T ss_pred EcCCCC-----eE-EEEcChHHHHHHhhhhe
Confidence 877653 24 99999999 99999873
No 70
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.68 E-value=1.1e-07 Score=89.36 Aligned_cols=101 Identities=18% Similarity=0.233 Sum_probs=79.4
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHH-
Q psy16789 244 ECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAF- 322 (608)
Q Consensus 244 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l- 322 (608)
.+++.|+++|+++.++||++...+..+++++|+..... ..+.|...++.+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~-----------------------------g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ-----------------------------GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec-----------------------------CCCcHHHHHHHHH
Confidence 68999999999999999999999999999999864221 123344444433
Q ss_pred HHCC---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch
Q psy16789 323 QANG---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT 374 (608)
Q Consensus 323 ~~~g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~ 374 (608)
++.| ..++|+||+.||.+|++.|+++++++ ++.+..+..||+++..+.-.+
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g 159 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRG 159 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCC
Confidence 3333 46999999999999999999999987 788888889999986544333
No 71
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=98.66 E-value=1.4e-07 Score=110.89 Aligned_cols=94 Identities=18% Similarity=0.191 Sum_probs=72.7
Q ss_pred hHHHHHHHHhhhhhceeeeCC---------ccccCchHHHHHHHHHhcCc--hhhhhhcccccccccccccccceeeecC
Q psy16789 33 PETGTLLEVGCVCNNASIIGD---------SLLGQPTEGALLAAGMKFGL--YAVNEHYVRLKEYPFSSEQKMMAVRCIP 101 (608)
Q Consensus 33 ~~~~~ll~~~~l~n~a~~~~~---------~~~G~pte~All~~~~~~g~--~~~~~~~~~v~~~pF~s~~k~m~v~~~~ 101 (608)
+....++.++++||++.+..+ ...|||+|.||+.++.+.+. ...+++++++.++||+|+||+|++++..
T Consensus 390 ~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~ 469 (997)
T TIGR01106 390 ATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHEN 469 (997)
T ss_pred HHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEec
Confidence 345578889999998876422 35799999999999986543 3567789999999999999999988754
Q ss_pred CCCCccccceEEEEccchhh-hhccccce
Q psy16789 102 KEGSSCDVDTRFFFLHRLLE-VGCVCNNA 129 (608)
Q Consensus 102 ~~gt~~~~~~~~~~~kg~~e-i~~lc~~a 129 (608)
.+.. ++.+.+++||++| ++..|+..
T Consensus 470 ~~~~---~~~~~~~~KGApe~Il~~c~~~ 495 (997)
T TIGR01106 470 EDPR---DPRHLLVMKGAPERILERCSSI 495 (997)
T ss_pred cCCC---CceEEEEEeCChHHHHHHhhHH
Confidence 2210 2346789999999 99999753
No 72
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.61 E-value=3.7e-07 Score=89.68 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC----EEEecCCcchHHHHHHH
Q psy16789 314 HKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD----MILVDDDFNTIIAAIEE 381 (608)
Q Consensus 314 ~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad----~v~~~~~~~~i~~~i~~ 381 (608)
.|...++.+.++ | ..++++||+.||.+|++.+++||+|+ |+.+.+|+.|+ ++...++-.++.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 677777777553 3 25899999999999999999999999 99999999999 88878888999998864
No 73
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.60 E-value=7.8e-08 Score=83.79 Aligned_cols=114 Identities=20% Similarity=0.303 Sum_probs=90.7
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH
Q psy16789 245 CMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324 (608)
Q Consensus 245 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 324 (608)
.|+.+.+.||++.++||++....+.=++++|+..-. .--++|....+.+.+
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~-----------------------------qG~~dK~~a~~~L~~ 93 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLY-----------------------------QGISDKLAAFEELLK 93 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceee-----------------------------echHhHHHHHHHHHH
Confidence 689999999999999999999999999999997522 113467766655544
Q ss_pred C----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC----cchHHHHHHHHHHHHHh
Q psy16789 325 N----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD----FNTIIAAIEEGKGIFYN 388 (608)
Q Consensus 325 ~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~----~~~i~~~i~~gR~~~~~ 388 (608)
+ .+.|+++||-.||.|+++..++++|+. ++.+..++.||+|+.... ...+.++|..++..++-
T Consensus 94 ~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 94 KLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 3 356999999999999999999999998 999999999999986543 44456666666655443
No 74
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.58 E-value=2.3e-07 Score=88.70 Aligned_cols=117 Identities=24% Similarity=0.193 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++++++.+.++.|+++|+++.++|+.....+..+++.+|+.......+..++-....+ ..+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p----------~~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQP----------DGIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEec----------ceeeEEccccHH
Confidence 4789999999999999999999999999999999999998643222221111000000 011223456677
Q ss_pred HHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccC
Q psy16789 317 TIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAAD 364 (608)
Q Consensus 317 ~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad 364 (608)
++++.+.+. ...+.++||+.+|.+|++.||++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 776665443 346999999999999999999999997 44444555554
No 75
>PRK08238 hypothetical protein; Validated
Probab=98.55 E-value=2.8e-05 Score=83.63 Aligned_cols=94 Identities=20% Similarity=0.218 Sum_probs=72.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
|.++++.+.+++++++|+++.++|+.+...+..+++.+|+. +.++.+++.. +..|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF---d~Vigsd~~~------------------~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF---DGVFASDGTT------------------NLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CEEEeCCCcc------------------ccCCchHH
Confidence 47899999999999999999999999999999999999982 2344443321 23466676
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
+.++..... +.+.++||+.+|.++.+.|+-.++++
T Consensus 131 ~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 131 AALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred HHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 544422111 22567899999999999999999997
No 76
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.53 E-value=6.8e-07 Score=85.78 Aligned_cols=125 Identities=26% Similarity=0.303 Sum_probs=88.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE--EeCchh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY--RVTPRH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~--r~~p~~ 314 (608)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.......+..++-. .+.. -..|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------------~i~~~~~~~p~~ 132 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG--------------MITGYDLRQPDG 132 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------eEECccccccch
Confidence 4579999999999999 9999999999999999999999864321111110000 0000 013677
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCE-EEecCCcchHHHHH
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADM-ILVDDDFNTIIAAI 379 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~-v~~~~~~~~i~~~i 379 (608)
|...++.++..+..+.|+|||.||.+|.+.|++|+..+ .........+++ ++ +++..+.+.+
T Consensus 133 k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc--CCHHHHHHHH
Confidence 88888888888899999999999999999999999876 333333344554 33 2455554444
No 77
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.46 E-value=8.4e-07 Score=86.13 Aligned_cols=126 Identities=21% Similarity=0.375 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
..+-++++++++.|+++|++..++|+++...+..+.+..|+......++.+++....+ ..|...
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~K----------------P~P~~l 151 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPK----------------PDPEPL 151 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCC----------------cCHHHH
Confidence 4678999999999999999999999999999999999999998776666545443322 124444
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCC---eeEEeCCC-CcHHHHhccCEEEecCCcchHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKAD---IGIAMGKQ-GTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~---vgia~~~~-~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
..+.+.+....+.++|+||+.+|+.|-+.|+ +|+..|.+ +.......+|+++. ++..+...+
T Consensus 152 ~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 152 LLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred HHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 4444544444347999999999999999999 77777743 45566667898875 455544433
No 78
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.45 E-value=2e-06 Score=85.23 Aligned_cols=145 Identities=14% Similarity=0.152 Sum_probs=98.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC------Cccc-cch-hhc-----------------
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH------GKVL-SGD-QID----------------- 290 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~------~~vi-~g~-~~~----------------- 290 (608)
.+..+.+.+++++++++|++++++|||.....+.+.+++++..+. +..+ .+. ...
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 446789999999999999999999999999999999988886542 1111 000 000
Q ss_pred --------cc-----------------CH-------HHHHHHhhc----ceE-EE-----EeCc--hhHHHHHHHHHHC-
Q psy16789 291 --------QM-----------------TE-------HQLQQVVNS----VTV-FY-----RVTP--RHKLTIVKAFQAN- 325 (608)
Q Consensus 291 --------~~-----------------~~-------~~~~~~~~~----~~v-~~-----r~~p--~~K~~~v~~l~~~- 325 (608)
.+ .. +++.+.+.+ +.+ .+ ...| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 00 111222211 111 11 2333 3788888887654
Q ss_pred ---CCEEEEEcCCcCcHHHHHh-CCeeEEeCCCCcHHHHhccC-------EEEecCCcchHHHHHHH
Q psy16789 326 ---GVIVGMTGDGVNDGVALKK-ADIGIAMGKQGTDVCKEAAD-------MILVDDDFNTIIAAIEE 381 (608)
Q Consensus 326 ---g~~v~~~GDg~ND~~al~~-A~vgia~~~~~~~~a~~~ad-------~v~~~~~~~~i~~~i~~ 381 (608)
...|+++||+.||.+|++. ++.|++|+ |+.+..|+.++ ++.....-+|+.+++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 3569999999999999998 67999999 99988887543 66666677888887753
No 79
>KOG1615|consensus
Probab=98.39 E-value=5.8e-07 Score=81.11 Aligned_cols=98 Identities=26% Similarity=0.341 Sum_probs=76.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC--Ccc---------ccchhhcccCHHHHHHHhhcceE
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH--GKV---------LSGDQIDQMTEHQLQQVVNSVTV 306 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~--~~v---------i~g~~~~~~~~~~~~~~~~~~~v 306 (608)
+.+++++.+..|++.|.++.++||--...+..+|.++||+..+ ... .++++....
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt-------------- 154 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPT-------------- 154 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCcc--------------
Confidence 5799999999999999999999999999999999999998632 111 111111110
Q ss_pred EEEeCchhHHHHHHHHHHC--CCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 307 FYRVTPRHKLTIVKAFQAN--GVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~~--g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
.....|.++++.+++. -..++|+|||.||.+|...|+.=++.+
T Consensus 155 ---sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 ---SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ---ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 1234788999999885 357899999999999999988777765
No 80
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=98.36 E-value=3.2e-07 Score=108.58 Aligned_cols=169 Identities=12% Similarity=0.122 Sum_probs=98.9
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhc-Cc-hh--h-------------hhhcccccccccccccccceee
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF-GL-YA--V-------------NEHYVRLKEYPFSSEQKMMAVR 98 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~-g~-~~--~-------------~~~~~~v~~~pF~s~~k~m~v~ 98 (608)
..++.+.+.||++....+...|||+|.|+++++... .. .+ . .+++.+++++||+|++|+|+++
T Consensus 491 ~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvv 570 (1054)
T TIGR01657 491 SITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVI 570 (1054)
T ss_pred hHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEE
Confidence 356778899999887666789999999999976321 10 00 0 2457788999999999999999
Q ss_pred ecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeeeCChHH--HH
Q psy16789 99 CIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQ--KM 175 (608)
Q Consensus 99 ~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~--k~ 175 (608)
++..+ +....+++||++| ++.+|+.... -+..+..+-+++. .|++...-.|+.+...+++... .|
T Consensus 571 v~~~~-----~~~~~~~~KGApE~Il~~c~~~~~------p~~~~~~~~~~a~-~G~RVLalA~k~l~~~~~~~~~~~~r 638 (1054)
T TIGR01657 571 VSTND-----ERSPDAFVKGAPETIQSLCSPETV------PSDYQEVLKSYTR-EGYRVLALAYKELPKLTLQKAQDLSR 638 (1054)
T ss_pred EEEcC-----CCeEEEEEECCHHHHHHHcCCcCC------ChhHHHHHHHHHh-cCCEEEEEEEeecCccchhhhhhccH
Confidence 87643 2335789999999 9999985211 1223334444544 3665544444444322211100 01
Q ss_pred HHhHhhhcCCcCCCC--chhHHHHhhhhhhhHHHhhccCceEEEEEc
Q psy16789 176 MAVRVHKIGHNLPSK--RDGKMILSQSCSEYPKFQTLGKGLVAMARG 220 (608)
Q Consensus 176 m~v~~~~~~~~~~~k--g~~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 220 (608)
-. ++. +.. +.+ +-.+.+-++..+.++.+.+.|.|+.-+.-+
T Consensus 639 ~~--~E~-~L~-flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD 681 (1054)
T TIGR01657 639 DA--VES-NLT-FLGFIVFENPLKPDTKEVIKELKRASIRTVMITGD 681 (1054)
T ss_pred HH--Hhc-Cce-EEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCC
Confidence 00 110 000 000 000012223455777888888888777654
No 81
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.35 E-value=2.6e-06 Score=82.99 Aligned_cols=128 Identities=18% Similarity=0.299 Sum_probs=88.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.++++|+++.++||........+.+..|+......+++++...... ..|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k----------------p~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKK----------------PDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCC----------------cChHHH
Confidence 4578999999999999999999999999999999999999976554444443322111 112222
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEeC--CC-CcHHHHhccCEEEecCCcchHHHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAMG--KQ-GTDVCKEAADMILVDDDFNTIIAAIEE 381 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~~--~~-~~~~a~~~ad~v~~~~~~~~i~~~i~~ 381 (608)
..+.+.++.....++++||+.+|+.+.+.+|+ +|.+. .. ..+.....+++++ +++..+...+.+
T Consensus 156 ~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 156 LLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 23444444445679999999999999999997 44443 11 2334455788877 467777666643
No 82
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.34 E-value=2.1e-06 Score=82.95 Aligned_cols=111 Identities=15% Similarity=0.097 Sum_probs=76.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC---CccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH---GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~---~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
-++++++.+.++.+++.|+++.++||........+.+.++..... ....+++.+....+. ....-+.....
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~------~~~~~~~~~cg 142 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH------PCDGTCQNQCG 142 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC------CCccccccCCC
Confidence 468999999999999999999999999999999888877543211 112222222111000 00000000113
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 313 RHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
..|..+++.++.....+.|+|||.||.+|.+.||+.++-+
T Consensus 143 ~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 143 CCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 4688999988887888999999999999999999987743
No 83
>KOG0206|consensus
Probab=98.33 E-value=5.2e-07 Score=103.58 Aligned_cols=135 Identities=19% Similarity=0.229 Sum_probs=106.2
Q ss_pred CchHHHHHHHHhhhhhceeeeCC-c------cccCchHHHHHHHHHhcCch--------------hhhhhcccccccccc
Q psy16789 31 SKPETGTLLEVGCVCNNASIIGD-S------LLGQPTEGALLAAGMKFGLY--------------AVNEHYVRLKEYPFS 89 (608)
Q Consensus 31 ~~~~~~~ll~~~~l~n~a~~~~~-~------~~G~pte~All~~~~~~g~~--------------~~~~~~~~v~~~pF~ 89 (608)
.++...+++++.++|++...+.+ + ..-+|.|.||++.|..+|.. ...+.+.++..++|+
T Consensus 459 ~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~ 538 (1151)
T KOG0206|consen 459 QAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFN 538 (1151)
T ss_pred CcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccc
Confidence 45667788999999998887652 1 23599999999999999851 123678899999999
Q ss_pred cccccceeeecCCCCCccccceEEEEccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccccccccceeee
Q psy16789 90 SEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYP 168 (608)
Q Consensus 90 s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~~~~~~~~~~p 168 (608)
|+||+|+|++++++|. .++++||+.. ++..++. ++......|+.++-+||.+ |+++.+-.|+.+.+-+
T Consensus 539 S~RKRMSVIVR~p~g~------i~LycKGADsvI~erL~~----~~~~~~e~T~~Hl~~yA~e-GLRTLc~A~r~l~e~e 607 (1151)
T KOG0206|consen 539 STRKRMSVIVRDPDGR------ILLYCKGADSVIFERLSK----NGEKLREKTQEHLEEYATE-GLRTLCLAYRELDEEE 607 (1151)
T ss_pred cccceeEEEEEcCCCc------EEEEEcCcchhhHhhhhh----cchHHHHHHHHHHHHHHhh-hhhHhhhhhhccCHHH
Confidence 9999999999999875 5899999999 8888875 2344456788888888876 7888777777777777
Q ss_pred CChHHHHH
Q psy16789 169 FSSEQKMM 176 (608)
Q Consensus 169 F~s~~k~m 176 (608)
|....++-
T Consensus 608 Y~~w~~~~ 615 (1151)
T KOG0206|consen 608 YEEWNERY 615 (1151)
T ss_pred HHHHHHHH
Confidence 76666553
No 84
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.30 E-value=3e-06 Score=81.27 Aligned_cols=125 Identities=19% Similarity=0.285 Sum_probs=84.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++||.+...+....+..|+......+++.++... ....|+--.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------------~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR----------------PKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC----------------CCCChHHHH
Confidence 5789999999999999999999999999999999999999765444444333211 011122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee---EEeCC-CCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG---IAMGK-QGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg---ia~~~-~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+.+.++-....++++||+.+|+.+-+++|+. +..|. +..+..+..+|+++. ++..+..++
T Consensus 139 ~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred HHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 33333333356799999999999999999964 33442 233445667888874 454454433
No 85
>PLN02954 phosphoserine phosphatase
Probab=98.25 E-value=1.1e-05 Score=78.63 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=81.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE------eC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR------VT 311 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r------~~ 311 (608)
+.+++.+.++.|+++|+++.++||.....+..+.+.+|+.... +.. ..+.... +..+.+. ..
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~-~~~~~~~---------~g~~~g~~~~~~~~~ 152 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFA-NQILFGD---------SGEYAGFDENEPTSR 152 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEE-eEEEEcC---------CCcEECccCCCcccC
Confidence 6799999999999999999999999999999999999996311 110 0000000 0000000 11
Q ss_pred chhHHHHHHHHHHC-C-CEEEEEcCCcCcHHHHHh--CCeeEEeCCCC-cHHHHhccCEEEecCCcchHHH
Q psy16789 312 PRHKLTIVKAFQAN-G-VIVGMTGDGVNDGVALKK--ADIGIAMGKQG-TDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 312 p~~K~~~v~~l~~~-g-~~v~~~GDg~ND~~al~~--A~vgia~~~~~-~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
...|.+.++.+.+. | ..+.++||+.||..|.+. ++++++.+... .+.....+|+++. ++..+.+
T Consensus 153 ~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred CccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 23477777766554 3 578999999999999777 45556555222 2334556888875 4444433
No 86
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.25 E-value=3.8e-06 Score=79.49 Aligned_cols=92 Identities=27% Similarity=0.357 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch-h--HH
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR-H--KL 316 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~-~--K~ 316 (608)
+++.+.|+.++++|++++++||.....+..+++.+|+.... ++ +.++.... +.....+.++. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~-~~~~~~~~---------~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VI-GNELFDNG---------GGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EE-EEEEECTT---------CCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EE-EEeeeecc---------cceeeeeECCCCCCcHH
Confidence 77779999999999999999999999999999999997632 11 11111000 22345555555 4 99
Q ss_pred HHHHHH------HHCCCEEEEEcCCcCcHHHHH
Q psy16789 317 TIVKAF------QANGVIVGMTGDGVNDGVALK 343 (608)
Q Consensus 317 ~~v~~l------~~~g~~v~~~GDg~ND~~al~ 343 (608)
..++.+ +.....+.++|||.||.+|+|
T Consensus 160 ~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 999988 345789999999999999986
No 87
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.25 E-value=4.6e-06 Score=78.63 Aligned_cols=114 Identities=13% Similarity=0.128 Sum_probs=79.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE-eCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR-VTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r-~~p~~ 314 (608)
-++.+++.+.++.|++.|+++.++|+.+......+.+..|+......+++.+...+. ...+.....++..+.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN-DGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-CCcEEEecCCCCccCcCCCCCC
Confidence 367899999999999999999999999999999999999987654444433221110 0000000001111111 12235
Q ss_pred HHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 315 KLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 315 K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
|.++++.+++. ...+.++|||.||..|.+.||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 88999998887 8899999999999999999987654
No 88
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.24 E-value=1.4e-05 Score=77.63 Aligned_cols=40 Identities=18% Similarity=0.271 Sum_probs=36.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
.-+.+.++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3345899999999999999999999999999999999986
No 89
>KOG0210|consensus
Probab=98.23 E-value=9.2e-06 Score=86.37 Aligned_cols=225 Identities=15% Similarity=0.175 Sum_probs=129.4
Q ss_pred CchHHHHHHHHhhhhhceeeeCCc------cccCchHHHHHHHHHhcCch---------------hhhhhcccccccccc
Q psy16789 31 SKPETGTLLEVGCVCNNASIIGDS------LLGQPTEGALLAAGMKFGLY---------------AVNEHYVRLKEYPFS 89 (608)
Q Consensus 31 ~~~~~~~ll~~~~l~n~a~~~~~~------~~G~pte~All~~~~~~g~~---------------~~~~~~~~v~~~pF~ 89 (608)
.+..+++...+.++|++.....+. ...+|.|+|++++....|+. +...+|.++..+||.
T Consensus 469 ~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFt 548 (1051)
T KOG0210|consen 469 MSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFT 548 (1051)
T ss_pred ccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccc
Confidence 346677889999999998865332 35799999999999988862 112478899999999
Q ss_pred cccccceeeecCCCCCccccceEEEEccchhhhh-ccccceeeeccccCCCccHHHHHHHHHHcCccc--------cccc
Q psy16789 90 SEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLEVG-CVCNNASIIGDSLLGQPTEGALLAAGMKFGLYA--------VNEH 160 (608)
Q Consensus 90 s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~ei~-~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~--------~~~~ 160 (608)
|+.|+|..++++.+ .+....+.||+.-++ ..-....+.++ -.|+- | +.|+++ ..++
T Consensus 549 sEtKRMGIIVr~e~-----~~evtfylKGAD~VMs~iVq~NdWleE-E~gNM--------A-REGLRtLVvakK~Ls~~e 613 (1051)
T KOG0210|consen 549 SETKRMGIIVRDET-----TEEVTFYLKGADVVMSGIVQYNDWLEE-ECGNM--------A-REGLRTLVVAKKVLSEEE 613 (1051)
T ss_pred cccceeeEEEecCC-----CceEEEEEecchHHHhcccccchhhhh-hhhhh--------h-hhcceEEEEEecccCHHH
Confidence 99999999999875 345677889988744 22221111100 01110 0 112221 1112
Q ss_pred ccc------ceeeeCChHHHHHHhHhhh-cCC--cCCC-CchhHHHHhhhhhhhHHHhhccCceEEEEEccCC-------
Q psy16789 161 YVR------LKEYPFSSEQKMMAVRVHK-IGH--NLPS-KRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNL------- 223 (608)
Q Consensus 161 ~~~------~~~~pF~s~~k~m~v~~~~-~~~--~~~~-kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e------- 223 (608)
|+. -....++...+.|+.++++ -.. .+.+ -|--+..=++....++-+...|.++--+.-..+|
T Consensus 614 ye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAk 693 (1051)
T KOG0210|consen 614 YEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAK 693 (1051)
T ss_pred HHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeeh
Confidence 211 1122344455666666542 111 1111 1211122223344566666777665433332221
Q ss_pred -----CCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q psy16789 224 -----QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA 271 (608)
Q Consensus 224 -----~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia 271 (608)
+.-..+-++ -+-.-|.++..-++.+|..+-...++.|++.+......
T Consensus 694 Ss~L~sR~q~ihv~-~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yy 745 (1051)
T KOG0210|consen 694 SSRLFSRGQYIHVI-RSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYY 745 (1051)
T ss_pred hccceecCceEEEE-EecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHH
Confidence 111111111 12235788999999999999999999999987765443
No 90
>PLN02382 probable sucrose-phosphatase
Probab=98.22 E-value=1e-05 Score=85.75 Aligned_cols=140 Identities=17% Similarity=0.190 Sum_probs=92.3
Q ss_pred hHHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC------Cc-cccchhhc----------------------
Q psy16789 241 HVRECM-STLLQSGVKVKLVTGDGQETATAIASMVGLDTIH------GK-VLSGDQID---------------------- 290 (608)
Q Consensus 241 ~~~~~I-~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~------~~-vi~g~~~~---------------------- 290 (608)
...+++ +++++.|+.++++|||++.....+.++.++..+. +. +..+..+.
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 344455 8899999999999999999999999999886552 00 10000000
Q ss_pred ----c-----------------cCH-------HHHHHHhh----cceE------EEEeCch--hHHHHHHHHHHC----C
Q psy16789 291 ----Q-----------------MTE-------HQLQQVVN----SVTV------FYRVTPR--HKLTIVKAFQAN----G 326 (608)
Q Consensus 291 ----~-----------------~~~-------~~~~~~~~----~~~v------~~r~~p~--~K~~~v~~l~~~----g 326 (608)
. ..+ +++.+.+. .+.+ +..+.|. .|...++.+.+. |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0 001 11122221 1111 2244443 588888877654 3
Q ss_pred ---CEEEEEcCCcCcHHHHHhCC-eeEEeCCCCcHHHHhcc--------CEEE-ecCCcchHHHHHHH
Q psy16789 327 ---VIVGMTGDGVNDGVALKKAD-IGIAMGKQGTDVCKEAA--------DMIL-VDDDFNTIIAAIEE 381 (608)
Q Consensus 327 ---~~v~~~GDg~ND~~al~~A~-vgia~~~~~~~~a~~~a--------d~v~-~~~~~~~i~~~i~~ 381 (608)
..++++||+.||.+||+.++ .||+|+ |+.+..|+.+ +++. .+.+-+|+.++|++
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 47899999999999999999 799999 9999998743 4443 34567888888753
No 91
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.19 E-value=9.2e-06 Score=78.95 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=40.8
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
|++.-.+..-+++.++|++++++|++++++|||+...+..+.+++|+.
T Consensus 8 GTLl~~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 8 GTLLPPGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCcCCCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 333334556678999999999999999999999999999999999974
No 92
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.17 E-value=3.6e-06 Score=74.35 Aligned_cols=115 Identities=21% Similarity=0.243 Sum_probs=73.4
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
..++.+++.+.+++|++.|++++++||+....+....+.+|+......++......................+.+..+..
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDK 101 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHH
Confidence 34789999999999999999999999999999999999999854433333222211100000000000111222233444
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCC-eeE
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKAD-IGI 349 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~-vgi 349 (608)
+..+.+.+......+.++||+.+|+.|.+.++ -++
T Consensus 102 ~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 102 LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 44455555444577999999999999999844 444
No 93
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.15 E-value=1.1e-05 Score=78.25 Aligned_cols=107 Identities=17% Similarity=0.142 Sum_probs=73.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC----CccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH----GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
+++|++.+.++.|++.|+++.++||.....+..+.+.. +.... ....+++.+....++. ...-+.....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p------~~~~~~~~~~ 146 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP------CDEHCQNHCG 146 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC------ccccccccCC
Confidence 57899999999999999999999999999999999887 64311 0111222211100000 0000000001
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 313 RHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..|..+++.++.....+.++|||.||..|.+.||+.++
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 24788888888777789999999999999999999777
No 94
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.12 E-value=1.3e-05 Score=76.56 Aligned_cols=104 Identities=14% Similarity=0.144 Sum_probs=76.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc-ccc-chh-hcccCHHHHHHHhhcceEE-EEeC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK-VLS-GDQ-IDQMTEHQLQQVVNSVTVF-YRVT 311 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~-vi~-g~~-~~~~~~~~~~~~~~~~~v~-~r~~ 311 (608)
.++++++.+.++.++++|++++++||.....+..+++.+|+....+. +.. .+. +.. .+. ..+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g-------------~~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTG-------------NIDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeC-------------CccCCCCC
Confidence 46789999999999999999999999999999999999999653211 110 000 000 000 1123
Q ss_pred chhHHHHHHHHH-HCCC---EEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 312 PRHKLTIVKAFQ-ANGV---IVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 312 p~~K~~~v~~l~-~~g~---~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
++.|...++.+. +.+. .+.++||+.+|.+|++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 567887776654 3343 6889999999999999999999987
No 95
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.12 E-value=1.3e-05 Score=79.32 Aligned_cols=118 Identities=17% Similarity=0.203 Sum_probs=85.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+.....+....+..|+......++.+++..... ..|+--.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~K----------------P~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAK----------------PHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCC----------------CChHHHH
Confidence 467899999999999999999999999999999999999987777777776653322 1133333
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHHHhccCEEEecC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVCKEAADMILVDD 370 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a~~~ad~v~~~~ 370 (608)
.+.+.+.-....++++||+.+|+.+-+.||+ |+..+....+.....+|+++.+.
T Consensus 172 ~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 172 KALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 4444444445679999999999999999995 34333222222344688887643
No 96
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.12 E-value=1e-05 Score=78.16 Aligned_cols=125 Identities=24% Similarity=0.322 Sum_probs=85.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.....+..+.+..|+......++++++..... ..|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~K----------------p~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAK----------------PDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCC----------------CCcHHHH
Confidence 367999999999999999999999999999999999999987655555544332111 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcH-HHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTD-VCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~-~a~~~ad~v~~~~~~~~i~~~i 379 (608)
++.+.+......++++||+.+|+.+-++||+ ++..+....+ .....+|+++. ++..+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 3333333334678999999999999999996 4444422222 33446788764 565555544
No 97
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.10 E-value=9.3e-06 Score=78.31 Aligned_cols=116 Identities=20% Similarity=0.260 Sum_probs=78.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+...+..+.+..|+......++.+++..... ..|+-=.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------p~p~~~~ 148 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRK----------------PHPDPLL 148 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCC----------------CChHHHH
Confidence 578999999999999999999999999999999999999976554444443322111 1122112
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe---CCC-CcHHHHhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM---GKQ-GTDVCKEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~---~~~-~~~~a~~~ad~v~~ 368 (608)
.+.+.+......++++||+.+|+.+.+.||+.... |.. ........+|+++.
T Consensus 149 ~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~ 204 (213)
T TIGR01449 149 LAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD 204 (213)
T ss_pred HHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC
Confidence 33333333346699999999999999999965432 311 12233346788764
No 98
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.07 E-value=1.6e-05 Score=77.71 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=84.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+......++++++.... ...|+--.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~----------------KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAER----------------KPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCC----------------CCCHHHHH
Confidence 46899999999999999999999999998888888889987655444444432211 11232223
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee---EEeCCC-C-cHHHHhccCEEEecCCcchHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG---IAMGKQ-G-TDVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg---ia~~~~-~-~~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.+.+.+.-....++++||+.+|+.+-+.||+. +..|.. . .......+|+++. ++..+.+.
T Consensus 159 ~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~ 223 (229)
T PRK13226 159 VAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNP 223 (229)
T ss_pred HHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHH
Confidence 44444544457799999999999999999954 334421 1 1223456888874 45544443
No 99
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.06 E-value=2e-05 Score=79.00 Aligned_cols=126 Identities=19% Similarity=0.324 Sum_probs=82.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.|+++|+++.++||.+...+..+....|+....+.++++++..... ..|+--
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~K----------------p~p~~~ 163 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKK----------------PDPAAL 163 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCC----------------CCcHHH
Confidence 4678999999999999999999999999998888888888866544444443321110 011111
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCC-CcHHHHhccCEEEecCCcchHHHHH
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQ-GTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~-~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
..+.+.+.-....++++||+.||+.+.+.||+ ++..|.+ ..+..+..+|+++. ++..+.+++
T Consensus 164 ~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 164 LFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 12223222234679999999999999999996 3333322 22334457888874 555555443
No 100
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=98.04 E-value=1.2e-05 Score=93.46 Aligned_cols=84 Identities=17% Similarity=0.239 Sum_probs=63.8
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF 115 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~ 115 (608)
.+++..+++++. .. .-.|||+|.|++.++.+.+....++++++++++||+|++|+|++++...+ +.+.++
T Consensus 401 ~~ll~~a~l~~~--~~--~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~------~~~~~~ 470 (902)
T PRK10517 401 ERVLHSAWLNSH--YQ--TGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENT------EHHQLI 470 (902)
T ss_pred HHHHHHHHhcCC--cC--CCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECC------CeEEEE
Confidence 456777766432 21 23699999999998876554455677889999999999999999876543 235789
Q ss_pred ccchhh-hhccccce
Q psy16789 116 LHRLLE-VGCVCNNA 129 (608)
Q Consensus 116 ~kg~~e-i~~lc~~a 129 (608)
+||++| ++..|+..
T Consensus 471 ~KGa~e~il~~c~~~ 485 (902)
T PRK10517 471 CKGALEEILNVCSQV 485 (902)
T ss_pred EeCchHHHHHhchhh
Confidence 999999 99999864
No 101
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=98.00 E-value=2.3e-05 Score=91.12 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=63.6
Q ss_pred HHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc
Q psy16789 37 TLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL 116 (608)
Q Consensus 37 ~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~ 116 (608)
+++..++++ +.. ....|||+|.|++.++.+.+....+.++++++++||++.+|+|++++.+.+| .++.++
T Consensus 400 ~~l~~a~l~-s~~---~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~------~~~~~~ 469 (903)
T PRK15122 400 RVLQLAWLN-SFH---QSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQG------QHLLIC 469 (903)
T ss_pred HHHHHHHHh-CCC---CCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCC------cEEEEE
Confidence 456666553 221 1236999999999999887765455678899999999999999999875433 367899
Q ss_pred cchhh-hhccccce
Q psy16789 117 HRLLE-VGCVCNNA 129 (608)
Q Consensus 117 kg~~e-i~~lc~~a 129 (608)
||++| ++.+|+..
T Consensus 470 KGa~e~il~~c~~~ 483 (903)
T PRK15122 470 KGAVEEMLAVATHV 483 (903)
T ss_pred CCcHHHHHHhchhh
Confidence 99999 99999763
No 102
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.98 E-value=9.1e-05 Score=73.06 Aligned_cols=43 Identities=9% Similarity=0.119 Sum_probs=39.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
+...+.+.++|++|+++||.+++.||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4467789999999999999999999999999999999999854
No 103
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.98 E-value=1.1e-05 Score=75.23 Aligned_cols=100 Identities=25% Similarity=0.255 Sum_probs=69.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLT 317 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~ 317 (608)
+++++.+.++.+++.|++++++||.....+..+++.+|+....+..+..++-.... .+..--....+..|..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~--------g~~~~~~~~~~~~K~~ 145 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLT--------GPIEGQVNPEGECKGK 145 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEe--------CccCCcccCCcchHHH
Confidence 57999999999999999999999999999999999999874322211111000000 0000001234578888
Q ss_pred HHHHHHHC----CCEEEEEcCCcCcHHHHHhC
Q psy16789 318 IVKAFQAN----GVIVGMTGDGVNDGVALKKA 345 (608)
Q Consensus 318 ~v~~l~~~----g~~v~~~GDg~ND~~al~~A 345 (608)
.++.+++. ...+.++|||.||.+|++.|
T Consensus 146 ~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 146 VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 88876554 34689999999999999865
No 104
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.95 E-value=2.2e-05 Score=76.32 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=72.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
-++.+++.++++.|+++|+++.++|+........+.+..|+......++++++..... ..|+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~K----------------p~~~-- 152 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSK----------------PHPE-- 152 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCC----------------CCHH--
Confidence 3578999999999999999999999999999999999999987666555554332111 1121
Q ss_pred HHHHHHHHHCC---CEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 316 LTIVKAFQANG---VIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 316 ~~~v~~l~~~g---~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
-+.+.+++.| ..++++||+.+|+.+.+.||+....
T Consensus 153 -~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~ 190 (222)
T PRK10826 153 -VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIV 190 (222)
T ss_pred -HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEE
Confidence 2223333333 5699999999999999999976544
No 105
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.91 E-value=4e-05 Score=76.09 Aligned_cols=95 Identities=21% Similarity=0.213 Sum_probs=69.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|+++|+++.++|+.....+..+.+..|+.... +.++++++..... ..|+--
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~K----------------P~p~~~ 162 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGR----------------PAPWMA 162 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCC----------------CCHHHH
Confidence 46799999999999999999999999999999999999987653 5555555432211 112222
Q ss_pred HHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCe
Q psy16789 316 LTIVKAFQAN-GVIVGMTGDGVNDGVALKKADI 347 (608)
Q Consensus 316 ~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~v 347 (608)
..+.+.+.-. ...++++||+.+|+.+-+.||+
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHHHHHHHCCC
Confidence 2333333322 3459999999999999999994
No 106
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.91 E-value=0.00012 Score=73.20 Aligned_cols=136 Identities=17% Similarity=0.260 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHcCCC--CCCCccc---cchh-hccc-----------------
Q psy16789 237 PPRPHVRECMSTLLQ-SGVKVKLVTGDGQETATAIASMVGLD--TIHGKVL---SGDQ-IDQM----------------- 292 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~gi~--~~~~~vi---~g~~-~~~~----------------- 292 (608)
.+.+++.++|++|++ .|++++++|||+......+.+.+++. ..++..+ .+.. ...+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 466899999999998 79999999999999998888776642 1111100 0000 0000
Q ss_pred -----------------------CHHHHHHHh---h-c---ce-----EEEEeCc--hhHHHHHHHHHHC-C---CEEEE
Q psy16789 293 -----------------------TEHQLQQVV---N-S---VT-----VFYRVTP--RHKLTIVKAFQAN-G---VIVGM 331 (608)
Q Consensus 293 -----------------------~~~~~~~~~---~-~---~~-----v~~r~~p--~~K~~~v~~l~~~-g---~~v~~ 331 (608)
..+.+..+. . . .. -+..+.| .+|...++.+.+. | ..+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 011111111 0 0 11 1122233 3788777766544 3 56899
Q ss_pred EcCCcCcHHHHHhC----CeeEEeCCCCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 332 TGDGVNDGVALKKA----DIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 332 ~GDg~ND~~al~~A----~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
+||+.||.+|++.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999998 664 34677665 444555444
No 107
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.88 E-value=6e-05 Score=74.87 Aligned_cols=116 Identities=13% Similarity=0.129 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+......++++++..... ..|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~K----------------P~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGK----------------PDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCC----------------CCHHHHH
Confidence 467999999999999999999999999999999999999987777777776553211 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE-EeCCCCcHHHHhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGI-AMGKQGTDVCKEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi-a~~~~~~~~a~~~ad~v~~ 368 (608)
.+.+.+.-....++++||+.+|+.+-+.||+-. ++.+.........+|+++.
T Consensus 173 ~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~ 225 (260)
T PLN03243 173 YAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR 225 (260)
T ss_pred HHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC
Confidence 334444434566999999999999999999633 3322222322335677754
No 108
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.88 E-value=9.4e-05 Score=74.03 Aligned_cols=122 Identities=16% Similarity=0.216 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+...+..+.+..|+......++++++... .|+.-.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~~-------------------k~~~~~ 202 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPILS-------------------KRRALS 202 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCCC-------------------CHHHHH
Confidence 4679999999999999999999999999999999999999765544444332110 011111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee---EEeCCCCcH-HHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG---IAMGKQGTD-VCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg---ia~~~~~~~-~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+++.+.-....++++||+.+|+.+-+.||+- +..+.+..+ .....+|+++. ++..+...+
T Consensus 203 ~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 203 QLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 22222222345699999999999999999954 333422222 23446888874 566665544
No 109
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.82 E-value=0.00018 Score=78.86 Aligned_cols=40 Identities=5% Similarity=0.118 Sum_probs=36.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
.-+.+.++|++++++|++++++|||.......+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4567899999999999999999999999999999999974
No 110
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.82 E-value=4.4e-05 Score=87.40 Aligned_cols=79 Identities=16% Similarity=0.222 Sum_probs=60.3
Q ss_pred HHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEc
Q psy16789 37 TLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFL 116 (608)
Q Consensus 37 ~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~ 116 (608)
+++..+++||+ ...|||+|.|++..+.+.+ ..+..++++++.||++.+|+|++.+.+.+ ++..+.++
T Consensus 318 ~~l~~a~~~~~------~~~~~pi~~Ai~~~~~~~~--~~~~~~~~~~~~pf~~~~k~~~~~v~~~~-----~g~~~~~~ 384 (755)
T TIGR01647 318 DVLLYAALASR------EEDQDAIDTAVLGSAKDLK--EARDGYKVLEFVPFDPVDKRTEATVEDPE-----TGKRFKVT 384 (755)
T ss_pred HHHHHHHHhCC------CCCCChHHHHHHHHHHHhH--HHHhcCceEEEeccCCCCCeEEEEEEeCC-----CceEEEEE
Confidence 56777777764 1348999999999887643 34556788899999999999999886542 12356789
Q ss_pred cchhh-hhccccc
Q psy16789 117 HRLLE-VGCVCNN 128 (608)
Q Consensus 117 kg~~e-i~~lc~~ 128 (608)
||++| ++..|+.
T Consensus 385 kGa~e~il~~c~~ 397 (755)
T TIGR01647 385 KGAPQVILDLCDN 397 (755)
T ss_pred eCChHHHHHhcCC
Confidence 99999 8899975
No 111
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.82 E-value=0.00015 Score=84.32 Aligned_cols=84 Identities=13% Similarity=0.182 Sum_probs=62.5
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEE
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFF 115 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~ 115 (608)
.+++..+++++.. + ...+||+|.|++.++.+......+.++++++++||+|++|+|++++.+.+ +.+..+
T Consensus 366 ~~~l~~a~l~~~~--~--~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~------~~~~~~ 435 (867)
T TIGR01524 366 ERVLKMAWLNSYF--Q--TGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRA------EVTRLI 435 (867)
T ss_pred HHHHHHHHHhCCC--C--CCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCC------ceEEEE
Confidence 3466666654332 1 23579999999998876544455667889999999999999999886543 235789
Q ss_pred ccchhh-hhccccce
Q psy16789 116 LHRLLE-VGCVCNNA 129 (608)
Q Consensus 116 ~kg~~e-i~~lc~~a 129 (608)
+||++| ++.+|+..
T Consensus 436 ~KGa~e~il~~c~~~ 450 (867)
T TIGR01524 436 CKGAVEEMLTVCTHK 450 (867)
T ss_pred EeCcHHHHHHhchhh
Confidence 999999 88999753
No 112
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.78 E-value=0.00015 Score=71.48 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHC-C---CEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHH-----HHhcc---C-EEEecCCcchHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G---VIVGMTGDGVNDGVALKKADIGIAMGKQGTDV-----CKEAA---D-MILVDDDFNTIIAAI 379 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g---~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~-----a~~~a---d-~v~~~~~~~~i~~~i 379 (608)
..|...++.+++. + ..|+++||+.||.+||..++.||.++ |+.+. ..... . |....+.-.||++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 3799999988865 2 35788999999999999999999999 77777 22222 2 445555666777766
Q ss_pred HH
Q psy16789 380 EE 381 (608)
Q Consensus 380 ~~ 381 (608)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 113
>PTZ00174 phosphomannomutase; Provisional
Probab=97.78 E-value=0.00017 Score=71.38 Aligned_cols=52 Identities=19% Similarity=0.233 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHCCCEEEEEcC----CcCcHHHHHhC-CeeEEeCCCCcHHHHhccCEE
Q psy16789 314 HKLTIVKAFQANGVIVGMTGD----GVNDGVALKKA-DIGIAMGKQGTDVCKEAADMI 366 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GD----g~ND~~al~~A-~vgia~~~~~~~~a~~~ad~v 366 (608)
+|...++.+.+....|+++|| |.||.+||+.| -.|+++. |+.+.+|..+.++
T Consensus 188 sKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 188 DKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred cHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 688888887777778999999 99999999976 4677777 8888888776543
No 114
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.76 E-value=9.5e-05 Score=71.71 Aligned_cols=98 Identities=24% Similarity=0.244 Sum_probs=72.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC--CCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD--TIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
.++.+++.+.++.|+++|+++.++|+........+.+..|+. .....++++++..... ..|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~K----------------P~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGR----------------PAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCC----------------CCHH
Confidence 368899999999999999999999999999999999999987 5555555554432111 1122
Q ss_pred hHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 314 HKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 314 ~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
-=..+.+.+.-. ...++++||+.+|+.+-+.||+..
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 111222333222 357999999999999999999886
No 115
>PRK11587 putative phosphatase; Provisional
Probab=97.70 E-value=0.00019 Score=69.45 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=75.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.+.++.|+++|+++.++|+.+...+...-+..|+.. ...++++++..... ..|+--.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~~~~K----------------P~p~~~~ 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERVKRGK----------------PEPDAYL 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHhcCCC----------------CCcHHHH
Confidence 467999999999999999999999988777776667777743 33444444332111 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee-EEeCCCCcHHHHhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG-IAMGKQGTDVCKEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg-ia~~~~~~~~a~~~ad~v~~ 368 (608)
.+.+.+.-....++++||+.+|+.+-+.||+. |++...........+|+++.
T Consensus 146 ~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 146 LGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 33333433457799999999999999999974 44542222222345677654
No 116
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.70 E-value=0.00016 Score=70.38 Aligned_cols=93 Identities=23% Similarity=0.249 Sum_probs=67.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD----GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
.+.+.+.+.++.++++|+++.++|++ ...++..+.+.+|+......++.++....- .|
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~------------------Kp 175 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQY------------------QY 175 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCC------------------CC
Confidence 35566999999999999999999999 777999999999997654444444432210 01
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeC
Q psy16789 313 RHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMG 352 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~ 352 (608)
+|. ..+++.+ .++|+||+.||..+-+.|++ ++..+
T Consensus 176 -~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 176 -TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 122 2345545 37899999999999999994 44444
No 117
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.69 E-value=0.00018 Score=72.07 Aligned_cols=100 Identities=18% Similarity=0.208 Sum_probs=68.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|+++|+++.++||.....+..+.+..|+.... ..++++++..... ..|+-=
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~K----------------P~p~~~ 164 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGR----------------PYPWMA 164 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCC----------------CChHHH
Confidence 46799999999999999999999999999888888877775532 3444443322111 112221
Q ss_pred HHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCe---eEEeC
Q psy16789 316 LTIVKAFQAN-GVIVGMTGDGVNDGVALKKADI---GIAMG 352 (608)
Q Consensus 316 ~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~v---gia~~ 352 (608)
..+.+.+.-. ...++|+||+.+|+.+-+.||+ |+..+
T Consensus 165 ~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 165 LKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 2223333322 2568999999999999999995 55444
No 118
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.64 E-value=0.00013 Score=69.47 Aligned_cols=93 Identities=19% Similarity=0.246 Sum_probs=69.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
+++.+...++++.|+++|+++.++||.+...+..+.+..|+......++++++... ...|+.-
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-----------------KP~p~~~ 167 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-----------------KPNPEPL 167 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-----------------CcCHHHH
Confidence 44666779999999999999999999999999999999999876655555544321 1223333
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhC
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKA 345 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A 345 (608)
..+.+.+.-....++++||+.+|+.+-+.|
T Consensus 168 ~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 168 ILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 344455544556799999999999987754
No 119
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.58 E-value=0.0003 Score=67.52 Aligned_cols=106 Identities=16% Similarity=0.091 Sum_probs=75.2
Q ss_pred CCChhHHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMS-TLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~-~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.+.|++.++|+ .++++|++++++|+.....+..+++..++.... .++ +.+++..+. .. ..-..+..++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i-~t~le~~~g-------g~-~~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLI-ASQIERGNG-------GW-VLPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEE-EEEeEEeCC-------ce-EcCccCCChHH
Confidence 46899999995 788899999999999999999999986664322 233 333332110 00 01123567788
Q ss_pred HHHHHHHH-HCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 316 LTIVKAFQ-ANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 316 ~~~v~~l~-~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
..-++..- .......+-||+.||.||++.||.++++.
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 87666443 22334567899999999999999999996
No 120
>PRK11590 hypothetical protein; Provisional
Probab=97.52 E-value=0.00039 Score=66.95 Aligned_cols=106 Identities=16% Similarity=0.086 Sum_probs=74.9
Q ss_pred CCChhHHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECM-STLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.+.+++.+.| +.+++.|++++++|+.....+..+++.+|+... ..++ +.+++.. ...-..-..+..+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~-~~~i-~t~l~~~--------~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR-VNLI-ASQMQRR--------YGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc-CceE-EEEEEEE--------EccEECCccCCChHH
Confidence 3479999999 578889999999999999999999999996321 1233 3333220 000001123566788
Q ss_pred HHHHHHH-HHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 316 LTIVKAF-QANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 316 ~~~v~~l-~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
...++.. ........+-||+.||.||++.|+.+++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 8766644 323344567899999999999999999996
No 121
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.52 E-value=0.00026 Score=68.60 Aligned_cols=100 Identities=16% Similarity=0.201 Sum_probs=70.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+.+........+.+|+......++.+++..... ..|+-=.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~K----------------P~~~~~~ 157 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEK----------------PHPKIFY 157 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCC----------------CCHHHHH
Confidence 467999999999999999999999999888888889999976655555554432111 1122111
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee-EEeC
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG-IAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg-ia~~ 352 (608)
.+.+.+.-....++++||+. +|+.+-+.||+- |.+.
T Consensus 158 ~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 158 AALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22333332346799999998 899999999963 4443
No 122
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.51 E-value=0.00031 Score=66.84 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+-+........+..|+....+.+++.++..... ..|+-=.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~K----------------P~~~~~~ 155 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYK----------------PAPQVYQ 155 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCC----------------CCHHHHH
Confidence 467999999999999999999999999999999999999876555555554432211 1111112
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
.+.+.+.-....++++||+.+|+.+-+.+|+-..
T Consensus 156 ~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 156 LALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 3333343345679999999999999999997543
No 123
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.49 E-value=0.00045 Score=71.62 Aligned_cols=116 Identities=12% Similarity=0.131 Sum_probs=82.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.....+..+-+..|+....+.++.+++..... ..|+-=.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~K----------------P~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGK----------------PDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCC----------------CCHHHHH
Confidence 467999999999999999999999999999999999999987766666666543211 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHH-HhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVC-KEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a-~~~ad~v~~ 368 (608)
.+.+.+.-....++|+||+.+|+.|-+.|++-...-..+.+.. ...+|+++.
T Consensus 280 ~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 280 YAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR 332 (381)
T ss_pred HHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC
Confidence 3444444456779999999999999999996433211222121 234777764
No 124
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.46 E-value=0.0016 Score=74.69 Aligned_cols=165 Identities=15% Similarity=0.205 Sum_probs=97.6
Q ss_pred hhHHHhhccCceEEEEEccCCCCceEEEEee--ecCCCChhHHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHcCC--C
Q psy16789 203 EYPKFQTLGKGLVAMARGSNLQDLCYMGLVG--ICDPPRPHVRECMSTLLQ-SGVKVKLVTGDGQETATAIASMVGL--D 277 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~--~~d~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~gi--~ 277 (608)
....|.....|.+.+-+.. +++.... -...+.+++.+++++|.+ .|+.|+++|||+...........++ .
T Consensus 483 ~~~~y~~~~~rLi~~D~DG-----TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~li 557 (726)
T PRK14501 483 IIARYRAASRRLLLLDYDG-----TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLV 557 (726)
T ss_pred HHHHHHhccceEEEEecCc-----cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEE
Confidence 4455555556777765542 2221110 012367899999999999 5999999999999988887665553 1
Q ss_pred CCCCcccc--chhhc-----------------------------------------ccCH-------HHHHHHh----hc
Q psy16789 278 TIHGKVLS--GDQID-----------------------------------------QMTE-------HQLQQVV----NS 303 (608)
Q Consensus 278 ~~~~~vi~--g~~~~-----------------------------------------~~~~-------~~~~~~~----~~ 303 (608)
..++..+. +..+. ..++ +++.+.+ ..
T Consensus 558 aenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~ 637 (726)
T PRK14501 558 AEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSN 637 (726)
T ss_pred EeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 11111110 00000 0000 0111111 11
Q ss_pred --ceE-------EEEeCchhHHHHHHHHHHC--CCEEEEEcCCcCcHHHHHhC---CeeEEeCCCCcHHHHhccCEEEec
Q psy16789 304 --VTV-------FYRVTPRHKLTIVKAFQAN--GVIVGMTGDGVNDGVALKKA---DIGIAMGKQGTDVCKEAADMILVD 369 (608)
Q Consensus 304 --~~v-------~~r~~p~~K~~~v~~l~~~--g~~v~~~GDg~ND~~al~~A---~vgia~~~~~~~~a~~~ad~v~~~ 369 (608)
+.+ -.+....+|...++.+.+. ...++++||+.||.+|++.+ +.+++|| ++ +.+|++.+.+
T Consensus 638 ~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~ 712 (726)
T PRK14501 638 APLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPS 712 (726)
T ss_pred CCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCC
Confidence 111 1122234799888888764 35799999999999999986 6888888 53 4578888874
Q ss_pred CCcchHHHHH
Q psy16789 370 DDFNTIIAAI 379 (608)
Q Consensus 370 ~~~~~i~~~i 379 (608)
. +.+...+
T Consensus 713 ~--~eV~~~L 720 (726)
T PRK14501 713 Q--REVRELL 720 (726)
T ss_pred H--HHHHHHH
Confidence 3 4455554
No 125
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.43 E-value=0.00071 Score=73.29 Aligned_cols=121 Identities=17% Similarity=0.190 Sum_probs=83.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++++++.... ..|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~-----------------~kP~~-- 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSL-----------------NKSDL-- 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCC-----------------CCcHH--
Confidence 57899999999999999999999999999999999999998766666665543210 11221
Q ss_pred HHHHHHHH-CCCEEEEEcCCcCcHHHHHhCCee-EEeCC-CCcHHHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQA-NGVIVGMTGDGVNDGVALKKADIG-IAMGK-QGTDVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~-~g~~v~~~GDg~ND~~al~~A~vg-ia~~~-~~~~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
+...+++ ....+.++||+.+|+.+-+.||+- |++.. ...+.....+|+++. ++..+.+.+
T Consensus 391 -~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 391 -VKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred -HHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 1122222 235699999999999999999963 33321 222222345788764 555555544
No 126
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.43 E-value=0.00085 Score=64.17 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=35.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVG 275 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g 275 (608)
++.+++.+++++|++.|++++++|||.......+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999988754
No 127
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.42 E-value=0.00029 Score=68.55 Aligned_cols=96 Identities=17% Similarity=0.051 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+.+...+....+..|+......++.+++.....+ .|+-=.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP----------------~p~~~~ 156 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKE----------------DQRLWQ 156 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCC----------------CHHHHH
Confidence 5679999999999999999999999988888888888888765555555444322110 111111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
.+.+.+.-....++++||+.+|+.+-+.||+.
T Consensus 157 ~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 157 AVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred HHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 22222322345699999999999999999996
No 128
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.38 E-value=0.00054 Score=66.62 Aligned_cols=86 Identities=19% Similarity=0.296 Sum_probs=63.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHcCC--CCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDG----QETATAIASMVGL--DTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~ta~~ia~~~gi--~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
.+.+++.+.++.+++.|+++.++|||. ..++..+.+..|+ ......++.++..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 467889999999999999999999974 6688999999999 4433333333321
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI 347 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v 347 (608)
.-.+|.. .+++.+. ++++||..+|..+-+.||+
T Consensus 173 ~K~~K~~---~l~~~~i-~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 173 GQYTKTQ---WLKKKNI-RIFYGDSDNDITAAREAGA 205 (237)
T ss_pred CCCCHHH---HHHhcCC-eEEEcCCHHHHHHHHHcCC
Confidence 0123433 4444444 7889999999999999995
No 129
>PLN02940 riboflavin kinase
Probab=97.35 E-value=0.00046 Score=72.61 Aligned_cols=97 Identities=18% Similarity=0.215 Sum_probs=70.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH-HcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS-MVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~-~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.|+++|+++.++|+.....+....+ ..|+....+.++++++..... ..|+-=
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~K----------------P~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGK----------------PSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCC----------------CCHHHH
Confidence 467999999999999999999999999888877665 678876666666655542211 112222
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
..+.+.+.-....++++||+.+|+.+-+.||+..
T Consensus 157 ~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 157 LEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred HHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 2334444434567999999999999999999653
No 130
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.34 E-value=0.00054 Score=69.91 Aligned_cols=108 Identities=12% Similarity=0.005 Sum_probs=74.9
Q ss_pred ecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC-CCCccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 234 ICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT-IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 234 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
..+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. ....+...+... ..+.... -.+..|
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~--------~~~~~~~-~~kp~p 254 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDM--------HFQREQG-DKRPDD 254 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchh--------hhcccCC-CCCCcH
Confidence 467899999999999999999999999999999999999999875 333332222100 0000000 012334
Q ss_pred hhHHHHHHHHHH-CCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 313 RHKLTIVKAFQA-NGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 313 ~~K~~~v~~l~~-~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
+-+...++.+.. ....++|+||..+|+.+-+.||+...
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 455555555433 34779999999999999999997543
No 131
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.34 E-value=0.0033 Score=62.20 Aligned_cols=137 Identities=14% Similarity=0.109 Sum_probs=83.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
-++++++.+.++.|+++|+++.++||-....+..+.++.|+...+..++ ...+....+.. .... ----+....|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~Iv-SN~L~f~~dGv----ltG~-~~P~i~~~~K 193 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVV-SNFMDFDEDGV----LKGF-KGPLIHTFNK 193 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEE-eeeEEECCCCe----EeCC-CCCccccccc
Confidence 3478999999999999999999999999999999999999865442221 11111000000 0000 0000112345
Q ss_pred HHHHHH-----HH--HCCCEEEEEcCCcCcHHHHHhCC-----eeEEeCCCCc-----HHHHhccCEEEecCCcchHHHH
Q psy16789 316 LTIVKA-----FQ--ANGVIVGMTGDGVNDGVALKKAD-----IGIAMGKQGT-----DVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 316 ~~~v~~-----l~--~~g~~v~~~GDg~ND~~al~~A~-----vgia~~~~~~-----~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.+.+.. ++ .....+.++|||.||++|..-.. +.|+.- |.. +.-.++=|+|+.++.=-.++..
T Consensus 194 ~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfl-n~~~e~~l~~y~~~~Divl~~D~t~~v~~~ 272 (277)
T TIGR01544 194 NHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYL-NDRVDELLEKYMDSYDIVLVQDETLEVANS 272 (277)
T ss_pred HHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEec-ccCHHHHHHHHHHhCCEEEECCCCchHHHH
Confidence 554432 22 22367999999999999976541 233322 222 2345678999988765555554
Q ss_pred H
Q psy16789 379 I 379 (608)
Q Consensus 379 i 379 (608)
|
T Consensus 273 i 273 (277)
T TIGR01544 273 I 273 (277)
T ss_pred H
Confidence 4
No 132
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.30 E-value=0.00031 Score=64.85 Aligned_cols=98 Identities=22% Similarity=0.325 Sum_probs=73.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.|++.|++++++|+.+........+..|+......++..++.....+ .|+-=
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp----------------~~~~~ 139 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKP----------------DPDAY 139 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTT----------------SHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhh----------------HHHHH
Confidence 35689999999999999999999999999999999999999865556665554432111 01112
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
..+.+.+.-....++++||+..|+.+-+.||+.-
T Consensus 140 ~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 140 RRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 2344444444567999999999999999999643
No 133
>PRK09449 dUMP phosphatase; Provisional
Probab=97.29 E-value=0.00091 Score=65.00 Aligned_cols=124 Identities=16% Similarity=0.136 Sum_probs=78.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+ +|+++.++|+.....+...-+..|+....+.++.+++..... ..|+-=.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~K----------------P~p~~~~ 157 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAK----------------PDVAIFD 157 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCC----------------CCHHHHH
Confidence 36799999999999 689999999999888888888899876555555544432111 1111111
Q ss_pred HHHHHHHHC-CCEEEEEcCCc-CcHHHHHhCCee-EEeCCCCcH-HHHhccCEEEecCCcchHHHHH
Q psy16789 317 TIVKAFQAN-GVIVGMTGDGV-NDGVALKKADIG-IAMGKQGTD-VCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 317 ~~v~~l~~~-g~~v~~~GDg~-ND~~al~~A~vg-ia~~~~~~~-~a~~~ad~v~~~~~~~~i~~~i 379 (608)
.+++.+.-. ...+.++||+. +|+.+-+.||+- |.+...+.. .....+|+++. ++..+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 158 YALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 233333221 25699999998 699999999975 333311211 11124677663 455555433
No 134
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.28 E-value=0.00034 Score=65.70 Aligned_cols=94 Identities=15% Similarity=0.170 Sum_probs=64.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.|++.++++.|+++|+++.++|+... +....+..|+......++++++..... ..|+-=.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~k----------------p~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGK----------------PDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCC----------------CChHHHH
Confidence 5679999999999999999999997643 356778888876655555555432211 1121111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
.+.+.+.-....+.++||+.+|+.+-+.||+-
T Consensus 149 ~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 149 AAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22222222235699999999999999999974
No 135
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.27 E-value=0.0016 Score=59.40 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=65.9
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHc---CCCCCCCcccc-chhhc-ccCHHHHHHHhhcceE
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT---AIASMV---GLDTIHGKVLS-GDQID-QMTEHQLQQVVNSVTV 306 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~~---gi~~~~~~vi~-g~~~~-~~~~~~~~~~~~~~~v 306 (608)
+|...+++.+++++++++|++++++|||+...+. ....++ |..-+.+.++. ...+. .... .+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~----------e~ 94 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHR----------EV 94 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhc----------cc
Confidence 4678899999999999999999999999988874 555552 32111122221 11111 0000 11
Q ss_pred EEEeCchhHHHHHHHHHH-----CCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 307 FYRVTPRHKLTIVKAFQA-----NGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~-----~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
..+.+-+.|.+.++.+++ ....++.+||+.+|+.+.+++++.
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 122222347777776665 245667799999999999988764
No 136
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.25 E-value=0.00075 Score=63.11 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=66.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.|+++|+++.++|+..... ..+..++|+......++.+++..... ..|+--.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~K----------------P~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGK----------------PDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCC----------------CCHHHHH
Confidence 567999999999999999999999988877 55655688876555555443322111 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
.+.+.+......+.++||+..|+.+-+.+|+-
T Consensus 148 ~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 33333333457799999999999999999863
No 137
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.20 E-value=0.0012 Score=66.80 Aligned_cols=116 Identities=20% Similarity=0.219 Sum_probs=71.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
++.|++.+.++.|++.|+++.++|+.+......+-+..+...... .++.+++.... ...|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~----------------KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKK----------------KPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCC----------------CCCHHH
Confidence 467999999999999999999999998888877766553221111 12222222110 111222
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCC--cHHHHhccCEEEe
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQG--TDVCKEAADMILV 368 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~--~~~a~~~ad~v~~ 368 (608)
=..+.+.+.-....++++||+.+|+.+-+.||+....-..+ .......+|+++.
T Consensus 208 ~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 208 YNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 22333444334567999999999999999999654432122 1111235787764
No 138
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.18 E-value=0.00066 Score=63.71 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=64.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+. ..+..+.+..|+......++.+++... ..|. .
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~------------------~kp~--~ 145 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE------------------GKPH--P 145 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC------------------CCCC--h
Confidence 57899999999999999999999987 557778888888765444544433221 1122 1
Q ss_pred HHH-HHHHHC---CCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 317 TIV-KAFQAN---GVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 317 ~~v-~~l~~~---g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
+++ +.+++. ...++++||+.+|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 222 223333 356889999999999999998753
No 139
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.17 E-value=0.00099 Score=64.60 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=68.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+.++.+++. +++.++|+........+.+..|+....+.++.+.+..... ..|+-=.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~K----------------P~~~~~~ 159 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQK----------------PDKEIFN 159 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCC----------------CCHHHHH
Confidence 4679999999999999 9999999999999999999999977655555544432111 1111112
Q ss_pred HHHHHH-HHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 317 TIVKAF-QANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l-~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
.+.+.+ .-....++++||+. +|+.+-+.+|+.
T Consensus 160 ~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 160 YALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred HHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 333333 22345699999998 899999999963
No 140
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.14 E-value=0.0019 Score=59.64 Aligned_cols=99 Identities=12% Similarity=0.062 Sum_probs=70.1
Q ss_pred EeeecCCCChhHHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHcCCC---------CCCCccccchhhcccCHHHHHHH
Q psy16789 231 LVGICDPPRPHVRECMSTLLQSGVKVKLVTGD-GQETATAIASMVGLD---------TIHGKVLSGDQIDQMTEHQLQQV 300 (608)
Q Consensus 231 ~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~ta~~ia~~~gi~---------~~~~~vi~g~~~~~~~~~~~~~~ 300 (608)
..+-+-++.+++.+.++.|+++|+++.++|+. ....+..+...+|+. .....++.+++
T Consensus 39 ~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~------------ 106 (174)
T TIGR01685 39 KSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYK------------ 106 (174)
T ss_pred CCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccC------------
Confidence 33344457899999999999999999999987 888999999999986 32222222221
Q ss_pred hhcceEEEEeCchhH--HHHHHHHHHC------CCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 301 VNSVTVFYRVTPRHK--LTIVKAFQAN------GVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 301 ~~~~~v~~r~~p~~K--~~~v~~l~~~------g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
.+..| ..+.+.+.+. ...++++||+..|+.+-++|++-...
T Consensus 107 ----------~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 107 ----------PNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ----------CchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 11112 2344444432 35799999999999999999976554
No 141
>PRK06769 hypothetical protein; Validated
Probab=97.12 E-value=0.0011 Score=61.53 Aligned_cols=97 Identities=16% Similarity=0.091 Sum_probs=57.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHH--------HHHHHHHHcCCCCCCCccc-cchhhcccCHHHHHHHhhcceEEE
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQE--------TATAIASMVGLDTIHGKVL-SGDQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~--------ta~~ia~~~gi~~~~~~vi-~g~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
+.+++.+++++|++.|+++.++|+.... ......+..|+........ .+++... .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~----------------~ 92 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC----------------R 92 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC----------------C
Confidence 6799999999999999999999987631 1223344455543110000 0111000 0
Q ss_pred EeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 309 RVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 309 r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
...|+-=..+.+.+......+.++||+.+|+.+-+.|++-..
T Consensus 93 KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 93 KPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 111221123333333334679999999999999999995433
No 142
>PLN02811 hydrolase
Probab=97.08 E-value=0.0013 Score=63.74 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=61.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHH-HHHHcCCCCCCCccccch--hhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATA-IASMVGLDTIHGKVLSGD--QIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~-ia~~~gi~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
++.+++.+.|+.|+++|+++.++||........ ..+..++......+++++ +..... ..|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~K----------------P~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGK----------------PAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCC----------------CCcH
Confidence 467999999999999999999999987654432 222234443333444444 221100 1122
Q ss_pred hHHHHHHHHH---HCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 314 HKLTIVKAFQ---ANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 314 ~K~~~v~~l~---~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
-=..+++.+. -....+.++||+..|+.+-+.||+..
T Consensus 142 ~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 142 IFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 2223334342 22467999999999999999999643
No 143
>KOG0208|consensus
Probab=97.00 E-value=0.00054 Score=76.34 Aligned_cols=93 Identities=18% Similarity=0.344 Sum_probs=68.1
Q ss_pred HHHHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhc--------------C-c-----h------hh-h----hhccc
Q psy16789 34 ETGTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF--------------G-L-----Y------AV-N----EHYVR 82 (608)
Q Consensus 34 ~~~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~--------------g-~-----~------~~-~----~~~~~ 82 (608)
+...++.+.+.|++-....++.+|||.|.-+.+..... + . + +. . ..+..
T Consensus 524 ~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si 603 (1140)
T KOG0208|consen 524 PMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISI 603 (1140)
T ss_pred chHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEE
Confidence 35678888999998777788899999986554432211 0 0 0 00 0 14568
Q ss_pred ccccccccccccceeeecCCCCCccccceEEEEccchhh-hhccccceee
Q psy16789 83 LKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNNASI 131 (608)
Q Consensus 83 v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~a~~ 131 (608)
++.+||+|..++|+|++.+.+ +....+|+||+|| +..+|+.-+.
T Consensus 604 ~k~feF~S~LrRMSVIv~~~~-----e~~~~~ftKGaPE~I~~ic~p~tv 648 (1140)
T KOG0208|consen 604 VKQFEFSSALRRMSVIVSTGG-----EDKMMVFTKGAPESIAEICKPETV 648 (1140)
T ss_pred EEecccchhhheEEEEEecCC-----CCceEeeccCCHHHHHHhcCcccC
Confidence 899999999999999998765 3446789999999 9999998444
No 144
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.99 E-value=0.0037 Score=58.58 Aligned_cols=93 Identities=22% Similarity=0.194 Sum_probs=56.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHcCCCCCCCccccch-----hhcccCHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQ---------------ETATAIASMVGLDTIHGKVLSGD-----QIDQMTEHQL 297 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~vi~g~-----~~~~~~~~~~ 297 (608)
+.+++.+.+++|+++|+++.++|+.+. .....+.+..|+. ...++... +...
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i~~~~~~~~~~~~~------ 101 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGIYYCPHHPEDGCDC------ 101 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcC------
Confidence 579999999999999999999998762 1112233344542 11111110 0000
Q ss_pred HHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
....|+--..+.+.+.-....++|+||+.+|+.+-+.||+.
T Consensus 102 ----------~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 102 ----------RKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred ----------CCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 01112222233333433457799999999999999999964
No 145
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.93 E-value=0.0017 Score=62.02 Aligned_cols=95 Identities=13% Similarity=0.123 Sum_probs=63.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.|+++|+++.++|+-... .....+.+|+......++..++..... ..|+-=.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~K----------------P~~~~~~ 167 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEK----------------PDPKIFQ 167 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCC----------------CCHHHHH
Confidence 46799999999999999999999987654 466777888865544444433322111 1111111
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
.+.+.+.-....++++||+. +|+.+-+.||+-
T Consensus 168 ~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 168 EALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22233332346799999997 899999988864
No 146
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.90 E-value=0.0026 Score=56.13 Aligned_cols=94 Identities=20% Similarity=0.217 Sum_probs=64.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEE
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDG--------QETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVF 307 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 307 (608)
.++.+++.++++.|+++|+++.++|+.. ......+.+.+|+.... ....+ ..
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~-~~------------------ 83 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-LYACP-HC------------------ 83 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-EEECC-CC------------------
Confidence 3577999999999999999999999998 77788888888885321 11111 00
Q ss_pred EEeCchhHHHHHHHHH-HCCCEEEEEcC-CcCcHHHHHhCCeeE
Q psy16789 308 YRVTPRHKLTIVKAFQ-ANGVIVGMTGD-GVNDGVALKKADIGI 349 (608)
Q Consensus 308 ~r~~p~~K~~~v~~l~-~~g~~v~~~GD-g~ND~~al~~A~vgi 349 (608)
....|+-=..+.+.++ -....++|+|| ..+|+.+-+.+|+-.
T Consensus 84 ~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 84 RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 0111222223334442 33467999999 699999999998643
No 147
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.87 E-value=0.0039 Score=74.06 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=88.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC-CCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD-TIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~-~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
+.+++.+.++.|+++|+++.++|+.....+....+..|+. ...+.++.+++..... ..|+-=.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~K----------------P~Pe~~~ 225 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLK----------------PAPDIFL 225 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCC----------------CCHHHHH
Confidence 5799999999999999999999999999999999999986 4345555555443211 1122222
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe---eEEeCCCCcHHHHhccCEEEecCCcchHHHHHHHHHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADI---GIAMGKQGTDVCKEAADMILVDDDFNTIIAAIEEGKG 384 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v---gia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~~gR~ 384 (608)
.+.+.+.-....+.++||..+|+.+-+.|++ ++.-+....+.....+|+++.+-..-.+..++..|-.
T Consensus 226 ~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~ 296 (1057)
T PLN02919 226 AAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSD 296 (1057)
T ss_pred HHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCC
Confidence 3344444445679999999999999999996 3332322233344567888876544455555544433
No 148
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.87 E-value=0.0014 Score=59.16 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=72.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcC----CCCC----CCccccchhhcccCHHHHHHHhhcceEE-
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVG----LDTI----HGKVLSGDQIDQMTEHQLQQVVNSVTVF- 307 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g----i~~~----~~~vi~g~~~~~~~~~~~~~~~~~~~v~- 307 (608)
.++|+.++.++.+++.+++++++|+........+-+.++ +... ++..+..+..-. .++
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~-------------i~~~ 139 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHS-------------IKYT 139 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCcee-------------eecC
Confidence 368999999999999999999999888777777777665 2110 000110000000 000
Q ss_pred -EEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 308 -YRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 308 -~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
...-..+|...|+.+++..+.+.++|||+.|.+|-+.+|+-+|=
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 01224589999999999999999999999999999999988874
No 149
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.72 E-value=0.0032 Score=57.11 Aligned_cols=91 Identities=15% Similarity=0.212 Sum_probs=58.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
+..+++.+.++.|+++|+++.++|+.....+....+.. +......++..++.. ....|+-=.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-----------------~Kp~~~~~~ 125 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-----------------AKPEPEIFL 125 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-----------------CCcCHHHHH
Confidence 34578999999999999999999999998888877765 433332332222111 001111111
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~ 346 (608)
.+.+.+.-.. .++++||+.+|+.+-+.|+
T Consensus 126 ~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2222222224 7899999999999988775
No 150
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.68 E-value=0.005 Score=54.04 Aligned_cols=88 Identities=11% Similarity=0.132 Sum_probs=58.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHcC-------CCCCCCccccchhhcccCHHHHHHHhhcceEEE
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD-GQETATAIASMVG-------LDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~ta~~ia~~~g-------i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+ +......++.+++.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~------------------- 89 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL------------------- 89 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCC-------------------
Confidence 67899999999999999999999999 7877777777666 22211112211110
Q ss_pred EeCchhHHHHHHHHH--HCCCEEEEEcCCcCcHHHHHh
Q psy16789 309 RVTPRHKLTIVKAFQ--ANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 309 r~~p~~K~~~v~~l~--~~g~~v~~~GDg~ND~~al~~ 344 (608)
..|+.=..+.+.+. -....++|+||...|...+++
T Consensus 90 -pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 90 -PKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -cHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 01222223344444 345789999999999887764
No 151
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.64 E-value=0.0076 Score=56.22 Aligned_cols=140 Identities=21% Similarity=0.279 Sum_probs=85.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC--ccccchhhc-----------------ccCHHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG--KVLSGDQID-----------------QMTEHQLQ 298 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~--~vi~g~~~~-----------------~~~~~~~~ 298 (608)
+-|++.++++.+++.=-.++ +|-.-.+.+..+|+.+|+...+- .-++-++.. .++.+++.
T Consensus 84 lvPgA~etm~~l~~~~tp~v-~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQERWTPVV-ISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhccCCceE-EeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 46899999998887655554 45556677889999999954321 111111100 01111111
Q ss_pred HHhhcceEEEEeCchh---------------HHHHHHHHHHC---CCEEEEEcCCcCcHHHHHhCC-e-eEEeCCCCcHH
Q psy16789 299 QVVNSVTVFYRVTPRH---------------KLTIVKAFQAN---GVIVGMTGDGVNDGVALKKAD-I-GIAMGKQGTDV 358 (608)
Q Consensus 299 ~~~~~~~v~~r~~p~~---------------K~~~v~~l~~~---g~~v~~~GDg~ND~~al~~A~-v-gia~~~~~~~~ 358 (608)
+.+. .+|.|..|.. |..+++.+-+. ....+++||++.|+.|++.+. - |+|+.-||.+-
T Consensus 163 e~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 163 EKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 1111 1455555543 44444443332 233577999999999999875 2 36666678888
Q ss_pred HHhccCEEEecCCcchHHHHHH
Q psy16789 359 CKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 359 a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
+-..||+.+.+.+...+..+|+
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 8899999888888777776663
No 152
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.63 E-value=0.0088 Score=58.96 Aligned_cols=65 Identities=22% Similarity=0.230 Sum_probs=45.3
Q ss_pred eCchhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhC--------CeeEEeCCCCcHHHHhccCEEEecCCcchHHH
Q psy16789 310 VTPRHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKA--------DIGIAMGKQGTDVCKEAADMILVDDDFNTIIA 377 (608)
Q Consensus 310 ~~p~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A--------~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~ 377 (608)
..+.+|...++.+.+. ...++++||+.||.+|++.+ +.+++++ .+ ..+..|++++. +...+.+
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHHHH
Confidence 3445788777766544 34699999999999999998 4788885 23 23456888875 4444555
Q ss_pred HH
Q psy16789 378 AI 379 (608)
Q Consensus 378 ~i 379 (608)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
No 153
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.58 E-value=0.012 Score=54.90 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
+.+.+.+.+|+++|++|+.+|.........+-+++|+.
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 34567899999999999999999999999999999986
No 154
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.57 E-value=0.004 Score=56.97 Aligned_cols=92 Identities=20% Similarity=0.180 Sum_probs=60.6
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHcCCCCCCCccccc-----hhhcccCHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGD---------------GQETATAIASMVGLDTIHGKVLSG-----DQIDQMTEHQL 297 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~vi~g-----~~~~~~~~~~~ 297 (608)
+-+++.++++.|+++|+++.++|.. .......+.+..|+. ...++.+ ++...
T Consensus 30 ~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~------ 101 (161)
T TIGR01261 30 FEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC------ 101 (161)
T ss_pred ECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC------
Confidence 5689999999999999999999985 244566777777875 2112211 11110
Q ss_pred HHHhhcceEEEEeCchhHHHHHHHH-HHC---CCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVKAF-QAN---GVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~~l-~~~---g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
..-+..+++.+ ++. ...+.|+||+.+|+.+-+.+++....
T Consensus 102 --------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 102 --------------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred --------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 11222333333 222 35699999999999999999975543
No 155
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.49 E-value=0.0057 Score=59.17 Aligned_cols=103 Identities=20% Similarity=0.217 Sum_probs=69.3
Q ss_pred CCChhHHHHHHHH--HhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHH-hhcceEEEEeCc-
Q psy16789 237 PPRPHVRECMSTL--LQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQV-VNSVTVFYRVTP- 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l--~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~-~~~~~v~~r~~p- 312 (608)
|+.++.++.++.+ ++.|+.++++|.-|......+-+.-|+......+.+-...-+.+.. + .+ .-+..-|.+++|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~-l-~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGR-L-RVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCce-E-EEeCccCCCCCcCCCc
Confidence 5678999999999 4579999999999999999999999997654444433211100000 0 00 000012445555
Q ss_pred hhHHHHHHHHHHC----C---CEEEEEcCCcCcHHH
Q psy16789 313 RHKLTIVKAFQAN----G---VIVGMTGDGVNDGVA 341 (608)
Q Consensus 313 ~~K~~~v~~l~~~----g---~~v~~~GDg~ND~~a 341 (608)
.-|..+++.+++. | .+|..+|||.||...
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 3688888887754 4 689999999999543
No 156
>PLN02580 trehalose-phosphatase
Probab=96.44 E-value=0.044 Score=56.96 Aligned_cols=63 Identities=21% Similarity=0.161 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHC-C-----C-EEEEEcCCcCcHHHHHh-----CCeeEEeCCCCcHHHHhccCEEEecCCcchHHHHHH
Q psy16789 313 RHKLTIVKAFQAN-G-----V-IVGMTGDGVNDGVALKK-----ADIGIAMGKQGTDVCKEAADMILVDDDFNTIIAAIE 380 (608)
Q Consensus 313 ~~K~~~v~~l~~~-g-----~-~v~~~GDg~ND~~al~~-----A~vgia~~~~~~~~a~~~ad~v~~~~~~~~i~~~i~ 380 (608)
-+|...++.+.+. | . .++++||..||-.|++. +++||+|+ ++... ..|+|.+. +...+.+.++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CHHHHHHHHH
Confidence 3899888877654 3 1 24789999999999996 58999998 55433 26778775 4555555553
No 157
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.42 E-value=0.0084 Score=55.49 Aligned_cols=107 Identities=14% Similarity=0.203 Sum_probs=69.5
Q ss_pred hhccCceEEEEEccCCCCceEEEEeee--cCCCChhHHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHcCCCCCCCccc
Q psy16789 208 QTLGKGLVAMARGSNLQDLCYMGLVGI--CDPPRPHVRECMSTLLQSGVKVKLVTGDG-QETATAIASMVGLDTIHGKVL 284 (608)
Q Consensus 208 ~~~g~r~l~~a~~~~e~~l~~~G~~~~--~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~ta~~ia~~~gi~~~~~~vi 284 (608)
.+.|.+.+.+-... .+.- ...+.+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+....
T Consensus 21 ~~~~v~~vv~D~Dg---------tl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---- 87 (170)
T TIGR01668 21 KKVGIKGVVLDKDN---------TLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---- 87 (170)
T ss_pred HHCCCCEEEEecCC---------ccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc----
Confidence 45677777665432 1111 23578999999999999999999999988 67777777877764210
Q ss_pred cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 285 SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 285 ~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
+. ....|+-=..+.+.+.-....++|+||.. .|+.+-+.||+-
T Consensus 88 -~~--------------------~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 88 -HA--------------------VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred -CC--------------------CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 00 00112111122222222345699999998 799999999963
No 158
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.40 E-value=0.016 Score=54.01 Aligned_cols=27 Identities=22% Similarity=0.202 Sum_probs=24.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQ 264 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~ 264 (608)
+.+++.+++++|+++|+++.++|+-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999998763
No 159
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.36 E-value=0.0042 Score=56.04 Aligned_cols=96 Identities=13% Similarity=0.010 Sum_probs=68.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
-+++|++.+.++.|+ .++++.++|+-+...+..+.+.+|+.... ..++++++..... |.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~K------------------P~- 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVK------------------GK- 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccC------------------Ce-
Confidence 357999999999998 57999999999999999999999885432 4455554432211 21
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 315 KLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 315 K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
=....+.+......+.++||..+|..+-+.+++-|.-
T Consensus 104 ~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 104 YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 0112233333457899999999999988777666553
No 160
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.27 E-value=0.067 Score=60.09 Aligned_cols=186 Identities=15% Similarity=0.176 Sum_probs=101.8
Q ss_pred HHHHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEE
Q psy16789 34 ETGTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRF 113 (608)
Q Consensus 34 ~~~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~ 113 (608)
...+++.++.+||.+. -+|++.|++.++.+.+.... ..+.+.+||++++|+|.+.+. | .
T Consensus 326 ~~~~ll~~a~~~~~~s-------~~P~~~AIv~~a~~~~~~~~---~~~~~~~pF~~~~k~~gv~~~---g--------~ 384 (673)
T PRK14010 326 SFERLVKAAYESSIAD-------DTPEGRSIVKLAYKQHIDLP---QEVGEYIPFTAETRMSGVKFT---T--------R 384 (673)
T ss_pred cHHHHHHHHHHhcCCC-------CChHHHHHHHHHHHcCCCch---hhhcceeccccccceeEEEEC---C--------E
Confidence 3456788888888653 28999999999987764311 122345899999999998642 1 1
Q ss_pred EEccchhh-hhccccceeeeccccCCCccH--HHHHHHHHHcCccccccccccceeeeCChHHHHHHhHhhhcCCcCCCC
Q psy16789 114 FFLHRLLE-VGCVCNNASIIGDSLLGQPTE--GALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSK 190 (608)
Q Consensus 114 ~~~kg~~e-i~~lc~~a~~~~~~~~gdp~E--~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~k 190 (608)
.+.||+++ +...|... +. ..|.+ ...-+++. .|... +... .+.+..+++
T Consensus 385 ~i~kGa~~~il~~~~~~----g~--~~~~~~~~~~~~~a~-~G~~~-------l~v~---~~~~~lG~i----------- 436 (673)
T PRK14010 385 EVYKGAPNSMVKRVKEA----GG--HIPVDLDALVKGVSK-KGGTP-------LVVL---EDNEILGVI----------- 436 (673)
T ss_pred EEEECCHHHHHHHhhhc----CC--CCchHHHHHHHHHHh-CCCeE-------EEEE---ECCEEEEEE-----------
Confidence 34499999 88888741 10 01221 11112221 12111 1000 000000000
Q ss_pred chhHHHHhhhhhhhHHHhhccCceEEEEEccCC------CCceEEEEeeecCCCChhH-HHHHHHHHhCCCeEEEEcCCc
Q psy16789 191 RDGKMILSQSCSEYPKFQTLGKGLVAMARGSNL------QDLCYMGLVGICDPPRPHV-RECMSTLLQSGVKVKLVTGDG 263 (608)
Q Consensus 191 g~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e------~~l~~~G~~~~~d~~r~~~-~~~I~~l~~~Gi~v~~~TGd~ 263 (608)
+-.+.+-++..+.++++.+.|.|+.-+.-+... ++ +|+-.+--...|+- .+.|+++++.| +++..|||-
T Consensus 437 ~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e---lGI~~v~A~~~PedK~~iV~~lQ~~G-~~VaMtGDG 512 (673)
T PRK14010 437 YLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE---AGVDRFVAECKPEDKINVIREEQAKG-HIVAMTGDG 512 (673)
T ss_pred EeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH---cCCceEEcCCCHHHHHHHHHHHHhCC-CEEEEECCC
Confidence 000011223445667777888888766544110 11 22222223344444 56788888888 556789999
Q ss_pred HHHHHHHHH
Q psy16789 264 QETATAIAS 272 (608)
Q Consensus 264 ~~ta~~ia~ 272 (608)
..-|.++++
T Consensus 513 vNDAPALa~ 521 (673)
T PRK14010 513 TNDAPALAE 521 (673)
T ss_pred hhhHHHHHh
Confidence 999988875
No 161
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=96.27 E-value=0.01 Score=56.47 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-cCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM-VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.++++.|+++|+++.++|+-+.......... .++....+.+++..+..... ..|+-=
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~K----------------P~p~~~ 147 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRK----------------PEARIY 147 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCC----------------CCHHHH
Confidence 4689999999999999999999999876654433222 24433233333333222111 011111
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..+.+.+.-....+.++||+..|+.+-+++|+...
T Consensus 148 ~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 148 QHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 12333333334678999999999999999997543
No 162
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.26 E-value=0.032 Score=53.67 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=56.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQET---ATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
-|.-+++.+.++.+++.|++|+++|||+... +..-.++.|+......++-+.+-... ...
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~-----------------~~~ 181 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNK-----------------TVV 181 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCc-----------------hHh
Confidence 4677999999999999999999999999765 33445567776432222211100000 001
Q ss_pred hhHHHHHHHHHHCCCEEEE-EcCCcCcHH
Q psy16789 313 RHKLTIVKAFQANGVIVGM-TGDGVNDGV 340 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~-~GDg~ND~~ 340 (608)
.-|.+.-+.+.+.|+.|.+ +||..+|..
T Consensus 182 ~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 182 TYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred HHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 1266666677777776555 999999873
No 163
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.24 E-value=0.0037 Score=60.57 Aligned_cols=96 Identities=14% Similarity=0.128 Sum_probs=66.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCC-ccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHG-KVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~-~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
++.+++.+.++.| ++++.++|+.....+...-+..|+..... .++++++..... ..|+-=
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~K----------------P~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWK----------------PDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCC----------------CChHHH
Confidence 4568999999988 49999999999888888888889876553 455554432211 112211
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
..+.+.+.-....++++||+.+|+.+-+.||+....
T Consensus 149 ~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 149 FHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 222333332345689999999999999999987654
No 164
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.20 E-value=0.0091 Score=53.82 Aligned_cols=93 Identities=18% Similarity=0.205 Sum_probs=59.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHcCCCCCCCccccc----hhhcccCHHHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQ---------------ETATAIASMVGLDTIHGKVLSG----DQIDQMTEHQL 297 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~vi~g----~~~~~~~~~~~ 297 (608)
++.+++.++++.|+++|+++.++|+.+. .....+.+.+|+.... ..... +...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~~~------- 98 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-VLFCPHHPADNCS------- 98 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-EEECCCCCCCCCC-------
Confidence 3679999999999999999999998762 4455667778875210 00000 0000
Q ss_pred HHHhhcceEEEEeCchhHHHHHH-HHHHC---CCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 298 QQVVNSVTVFYRVTPRHKLTIVK-AFQAN---GVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 298 ~~~~~~~~v~~r~~p~~K~~~v~-~l~~~---g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
....+.++.+ .+++. ...+.++||+..|+.+-+.+++-..
T Consensus 99 -------------~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 99 -------------CRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -------------CCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0111222222 22333 3569999999999999999997543
No 165
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.17 E-value=0.03 Score=55.41 Aligned_cols=85 Identities=15% Similarity=0.136 Sum_probs=59.9
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHcCCCCCC-CccccchhhcccCHHHHHHHhhcceEEEEeC
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQE---TATAIASMVGLDTIH-GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVT 311 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~ 311 (608)
.++-+++.+.++.+++.|+++.++|++... .+....+..|+.... .. ++.|-.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~-----------------------lllr~~ 173 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH-----------------------LLLKKD 173 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce-----------------------EEeCCC
Confidence 456799999999999999999999998743 334556678886532 11 233322
Q ss_pred chhHHHHHHHHHHCCCEEEEEcCCcCcHHHHH
Q psy16789 312 PRHKLTIVKAFQANGVIVGMTGDGVNDGVALK 343 (608)
Q Consensus 312 p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~ 343 (608)
...|....+.+.+....++++||..+|.....
T Consensus 174 ~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 33455556666666667888999999986544
No 166
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.05 E-value=0.0055 Score=58.87 Aligned_cols=98 Identities=13% Similarity=0.049 Sum_probs=57.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQET--ATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t--a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
-++.+++.+.++.|+++|+++.++|+..... ........++....+.++...+.... ...|+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~----------------KP~p~ 156 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLR----------------KPDPR 156 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCC----------------CCCHH
Confidence 3567999999999999999999999875432 22222233443332233222211100 01111
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
-=..+.+.+.-....++++||...|+.+-++||+-.
T Consensus 157 ~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 157 IYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 111222333323456888999999999999999743
No 167
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.02 E-value=0.018 Score=53.02 Aligned_cols=95 Identities=11% Similarity=0.020 Sum_probs=59.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcce
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQE------------TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVT 305 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~------------ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 305 (608)
+-+++.++++.|+++|+++.++|..+.. ....+.+.+|+.. ..++.+.....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCC--------------
Confidence 3489999999999999999999976542 4566778888743 22222211100
Q ss_pred EEEEeCchhHHHHHHHHH--HCCCEEEEEcCCc--------CcHHHHHhCCeeEE
Q psy16789 306 VFYRVTPRHKLTIVKAFQ--ANGVIVGMTGDGV--------NDGVALKKADIGIA 350 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~--~~g~~v~~~GDg~--------ND~~al~~A~vgia 350 (608)
....|+--..+.+.+. -....+.|+||.. +|+.+-++||+-..
T Consensus 107 --~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~ 159 (166)
T TIGR01664 107 --RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFK 159 (166)
T ss_pred --CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcC
Confidence 0011111112233332 1235699999996 69999999987654
No 168
>KOG0209|consensus
Probab=95.96 E-value=0.0029 Score=69.39 Aligned_cols=82 Identities=26% Similarity=0.272 Sum_probs=58.1
Q ss_pred HHHHHhhhhhceeeeCCccccCchHHHHHHHHHhc-Cch-----h--hhhhcccccccccccccccceeeecCCC-CCcc
Q psy16789 37 TLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKF-GLY-----A--VNEHYVRLKEYPFSSEQKMMAVRCIPKE-GSSC 107 (608)
Q Consensus 37 ~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~-g~~-----~--~~~~~~~v~~~pF~s~~k~m~v~~~~~~-gt~~ 107 (608)
+-+.+.+.|++-...++.++|||+|.|.++..... ... + -.+.-.+.+++.|+|+.|+|+++..... |+
T Consensus 519 ~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~-- 596 (1160)
T KOG0209|consen 519 ETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGS-- 596 (1160)
T ss_pred hHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCC--
Confidence 34556677776665566799999999999876321 110 1 1123346889999999999999987653 33
Q ss_pred ccceEEEEccchhh
Q psy16789 108 DVDTRFFFLHRLLE 121 (608)
Q Consensus 108 ~~~~~~~~~kg~~e 121 (608)
+..+++.+||+||
T Consensus 597 -s~k~~~aVKGAPE 609 (1160)
T KOG0209|consen 597 -SEKYFVAVKGAPE 609 (1160)
T ss_pred -ceEEEEEecCCHH
Confidence 3668899999999
No 169
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.96 E-value=0.095 Score=60.71 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=32.6
Q ss_pred CCChhHHHHHHHH-HhCCCeEEEEcCCcHHHHHHHHHHc
Q psy16789 237 PPRPHVRECMSTL-LQSGVKVKLVTGDGQETATAIASMV 274 (608)
Q Consensus 237 ~~r~~~~~~I~~l-~~~Gi~v~~~TGd~~~ta~~ia~~~ 274 (608)
.+.+++.+++++| ++.|+.|+++|||...+.......+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5678999999997 7789999999999999988877553
No 170
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.95 E-value=0.041 Score=54.10 Aligned_cols=93 Identities=15% Similarity=0.232 Sum_probs=63.1
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHHHcCCCC-CCCccccchhhcccCHHHHHHHhhcceE
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT--AIASMVGLDT-IHGKVLSGDQIDQMTEHQLQQVVNSVTV 306 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~--~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v 306 (608)
|.+.-.+.+-|++.+++++|+++|+++.++|+.....+. ...+++|+.. ....+++..+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~---------------- 80 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA---------------- 80 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH----------------
Confidence 455556778899999999999999999999986654444 5678889875 444444333221
Q ss_pred EEEeCchhHHHHHHHHHH---CCCEEEEEcCCcCcHHHHHhCC
Q psy16789 307 FYRVTPRHKLTIVKAFQA---NGVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~---~g~~v~~~GDg~ND~~al~~A~ 346 (608)
...+.+.+++ .+..+.++||+..|...+..++
T Consensus 81 --------~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 --------VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred --------HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0111222222 2467999999999998886443
No 171
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.81 E-value=0.032 Score=50.02 Aligned_cols=110 Identities=20% Similarity=0.265 Sum_probs=78.6
Q ss_pred hHHHhhccCceEEEEEccCCCCceEEEEeeecC-CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCc
Q psy16789 204 YPKFQTLGKGLVAMARGSNLQDLCYMGLVGICD-PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGK 282 (608)
Q Consensus 204 ~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d-~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 282 (608)
.+.+...|.+.+.+--.. + +++..+ +..|++++=+.+++++|+++.++|..+.......++.+|++.-
T Consensus 20 ~~~L~~~Gikgvi~DlDN-----T---Lv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi--- 88 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-----T---LVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFI--- 88 (175)
T ss_pred HHHHHHcCCcEEEEeccC-----c---eecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCcee---
Confidence 466778888877664332 1 233333 3678999999999999999999999999999999999999752
Q ss_pred cccchhhcccCHHHHHHHhhcceEEEEeCchhHH--HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 283 VLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL--TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 283 vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~--~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
+.-..|-.+. +.++.++-..+.|.|+||.. .|+-+=+.+|+=
T Consensus 89 ------------------------~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 89 ------------------------YRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred ------------------------ecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 1112233332 44444444467899999995 688887777753
No 172
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.74 E-value=0.021 Score=47.79 Aligned_cols=88 Identities=16% Similarity=0.263 Sum_probs=54.7
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HHHcCCCCCCCccccchhhcccCHHHHHHHhhcceE
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI---ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTV 306 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~i---a~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 306 (608)
|++...+.+-|++.++|+.|+++|++++++|.....+...+ .+.+|+....+.+++...
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~------------------ 68 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGM------------------ 68 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHH------------------
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHH------------------
Confidence 45556777889999999999999999999998764443333 366788754444332221
Q ss_pred EEEeCchhHHHHHHHHHH--CCCEEEEEcCCcCcHHHHHhCC
Q psy16789 307 FYRVTPRHKLTIVKAFQA--NGVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~--~g~~v~~~GDg~ND~~al~~A~ 346 (608)
.+.+.+++ .+..|..+|.. .....++.+|
T Consensus 69 ----------~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 69 ----------AAAEYLKEHKGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp ----------HHHHHHHHHTTSSEEEEES-H-HHHHHHHHTT
T ss_pred ----------HHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcC
Confidence 23344444 47788888865 4555555555
No 173
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=95.65 E-value=0.023 Score=53.34 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=65.0
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHH
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTI 318 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~ 318 (608)
.++ .+.++.|++. +++.++||.....+....+..|+....+.+++.++..... ..|+-=..+
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~K----------------P~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHK----------------PAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCC----------------CChHHHHHH
Confidence 344 5899999875 8999999999999999999999987666666655543211 112222233
Q ss_pred HHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 319 VKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 319 v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
.+.++.....+.++||..+|+.+-+.||+-.
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 3333333455889999999999999999643
No 174
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.54 E-value=0.053 Score=52.32 Aligned_cols=99 Identities=14% Similarity=0.146 Sum_probs=63.8
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc---CCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeC
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV---GLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVT 311 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~---gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~ 311 (608)
+-++.+++.++++.|+++|+++.++|..+......+.+.. ++........+ ..+.....
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd------------------~~~g~KP~ 154 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFD------------------TTVGLKTE 154 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEE------------------eCcccCCC
Confidence 3568899999999999999999999999887777666554 22221111100 00111111
Q ss_pred chhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 312 PRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 312 p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
|+-=..+.+.+.-....++++||...|+.+-++||+-...
T Consensus 155 p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 155 AQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred HHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2212233444443456799999999999999999975443
No 175
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.52 E-value=0.057 Score=55.78 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=61.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHh
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGD---------------GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV 301 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 301 (608)
++.|++.++++.|+++|+++.++|+. ....+..+.+..|+.- ....+......+ +
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~sd---~------ 99 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPED---N------ 99 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCcc---c------
Confidence 47899999999999999999999984 2334556667777741 111111100000 0
Q ss_pred hcceEEEEeCchhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCCeeEEe
Q psy16789 302 NSVTVFYRVTPRHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 302 ~~~~v~~r~~p~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~vgia~ 351 (608)
.. ....|..++..+.+. ...+.|+||+.+|..+-+.|++-...
T Consensus 100 ----~~---~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 100 ----CS---CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred ----CC---CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00 112233344333322 37799999999999999999976443
No 176
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.48 E-value=0.11 Score=58.34 Aligned_cols=184 Identities=16% Similarity=0.209 Sum_probs=101.4
Q ss_pred HHHHHHhhhhhceeeeCCccccCchHHHHHHHHHh-cCchhhhhhcccccccccccccccceeeecCCCCCccccceEEE
Q psy16789 36 GTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMK-FGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFF 114 (608)
Q Consensus 36 ~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~-~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~ 114 (608)
.+++.++++|+.+. -+|...|++.++.+ .+......+++..+..||++.+|+|.+.+. | ..
T Consensus 328 ~~ll~~a~~~s~~s-------~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~---g--------~~ 389 (679)
T PRK01122 328 EELADAAQLSSLAD-------ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLD---G--------RE 389 (679)
T ss_pred HHHHHHHHHhcCCC-------CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEEC---C--------EE
Confidence 45778888887653 15778899999876 454332333567788999999998887532 1 35
Q ss_pred Eccchhh-hhccccceeeeccccCCCcc----HHHHHHHHHHcCcccc--ccccccceeeeCChHHHHHHhHhhhcCCcC
Q psy16789 115 FLHRLLE-VGCVCNNASIIGDSLLGQPT----EGALLAAGMKFGLYAV--NEHYVRLKEYPFSSEQKMMAVRVHKIGHNL 187 (608)
Q Consensus 115 ~~kg~~e-i~~lc~~a~~~~~~~~gdp~----E~Al~~~~~~~~~~~~--~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~ 187 (608)
+.||++| +...|+.. |.+. +.+.-+++. .|.... ..+.+.+..+.+.
T Consensus 390 ~~kGa~e~il~~~~~~--------g~~~~~~~~~~~~~~a~-~G~~~l~va~~~~~lG~i~l~----------------- 443 (679)
T PRK01122 390 IRKGAVDAIRRYVESN--------GGHFPAELDAAVDEVAR-KGGTPLVVAEDNRVLGVIYLK----------------- 443 (679)
T ss_pred EEECCHHHHHHHHHhc--------CCcChHHHHHHHHHHHh-CCCcEEEEEECCeEEEEEEEe-----------------
Confidence 7899999 87888541 1111 111112221 121110 0000111111110
Q ss_pred CCCchhHHHHhhhhhhhHHHhhccCceEEEEEccCC------CCceEEEEeeecCCCChhH-HHHHHHHHhCCCeEEEEc
Q psy16789 188 PSKRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNL------QDLCYMGLVGICDPPRPHV-RECMSTLLQSGVKVKLVT 260 (608)
Q Consensus 188 ~~kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e------~~l~~~G~~~~~d~~r~~~-~~~I~~l~~~Gi~v~~~T 260 (608)
+.+-+...+.++++.+.|.+|.-+.-...+ ++ +|+-.+--...|+- .+.|+++++.| +++..|
T Consensus 444 ------D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e---lGId~v~A~~~PedK~~iV~~lQ~~G-~~VaMt 513 (679)
T PRK01122 444 ------DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE---AGVDDFLAEATPEDKLALIRQEQAEG-RLVAMT 513 (679)
T ss_pred ------ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH---cCCcEEEccCCHHHHHHHHHHHHHcC-CeEEEE
Confidence 011123344666777778887665543110 00 12211222334444 56688899888 567789
Q ss_pred CCcHHHHHHHHHH
Q psy16789 261 GDGQETATAIASM 273 (608)
Q Consensus 261 Gd~~~ta~~ia~~ 273 (608)
||-..-|.++++.
T Consensus 514 GDGvNDAPALa~A 526 (679)
T PRK01122 514 GDGTNDAPALAQA 526 (679)
T ss_pred CCCcchHHHHHhC
Confidence 9988888888653
No 177
>PRK10444 UMP phosphatase; Provisional
Probab=95.47 E-value=0.076 Score=52.37 Aligned_cols=48 Identities=23% Similarity=0.370 Sum_probs=40.9
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH---cCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM---VGLD 277 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---~gi~ 277 (608)
|++.-.+.+-+++.++++.|+++|++++++||+...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 66667778889999999999999999999999998877777666 5764
No 178
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=95.43 E-value=0.033 Score=52.20 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=66.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.+++++|+ .++.++|+.+...+....+..|+....+.++..++..... ..+...|+-=.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~------------~~~KP~p~~~~ 148 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDY------------LLPKPSPQAYE 148 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCcc------------CCCCCCHHHHH
Confidence 36789999999997 4789999999999999999999976555555444332100 00001122112
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeE
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGI 349 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgi 349 (608)
.+.+.+......++++||+..|+.+-+.+|+..
T Consensus 149 ~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 149 KALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 334444444567899999999999999998754
No 179
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.35 E-value=0.15 Score=50.52 Aligned_cols=48 Identities=29% Similarity=0.433 Sum_probs=37.8
Q ss_pred EEeeecCC----CChhHHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHcCCC
Q psy16789 230 GLVGICDP----PRPHVRECMSTLLQSGVKVKLVTGDGQET---ATAIASMVGLD 277 (608)
Q Consensus 230 G~~~~~d~----~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~~gi~ 277 (608)
|++.-.+. +-+++.++|++|+++|++++++||++..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 78899999999999999999999976554 45555667874
No 180
>PLN02423 phosphomannomutase
Probab=95.35 E-value=0.15 Score=50.26 Aligned_cols=38 Identities=21% Similarity=0.245 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHCCCEEEEEcC----CcCcHHHHHh-CCeeEEeC
Q psy16789 314 HKLTIVKAFQANGVIVGMTGD----GVNDGVALKK-ADIGIAMG 352 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GD----g~ND~~al~~-A~vgia~~ 352 (608)
+|...++.++ ....|+++|| |.||.+|++. -=.|+.+.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 7998999888 7788999999 8999999996 55788886
No 181
>PLN03017 trehalose-phosphatase
Probab=95.33 E-value=0.28 Score=50.69 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=30.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA 271 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia 271 (608)
.+-+++.++|++|+ .|++++++|||.......+.
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 37799999999999 78999999999999988774
No 182
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=95.21 E-value=0.048 Score=52.78 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=80.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK 315 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 315 (608)
.++.+++.+.++.|++.|+.+.+.|+.....+..+.+..|+......++++++...-. ..|+-=
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~K----------------P~Pd~y 148 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGK----------------PAPDIY 148 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCC----------------CCCHHH
Confidence 4678999999999999999999999999999999999999998888888887765433 235555
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCee
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vg 348 (608)
....+.+.-....+..+.|+.+.+.|-+.||.-
T Consensus 149 L~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 149 LLAAERLGVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred HHHHHHcCCChHHeEEEecchhHHHHHHHCCCE
Confidence 555555555667899999999999999999943
No 183
>KOG3120|consensus
Probab=95.05 E-value=0.022 Score=53.25 Aligned_cols=121 Identities=16% Similarity=0.221 Sum_probs=72.8
Q ss_pred CCChhHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch-h
Q psy16789 237 PPRPHVRECMSTLLQSGV-KVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR-H 314 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~-~ 314 (608)
|+-|+..++|+.+++.|- .++++|.-|.-....+.+..|+..-...+.+-...-+...+-...-...-+=|.++.+. -
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 567999999999999996 99999999999888888888885422222211111000000000000000123333332 3
Q ss_pred HHHHHHHHHHC----C---CEEEEEcCCcCc-HHHHHhCCeeEEeCCCCcH
Q psy16789 315 KLTIVKAFQAN----G---VIVGMTGDGVND-GVALKKADIGIAMGKQGTD 357 (608)
Q Consensus 315 K~~~v~~l~~~----g---~~v~~~GDg~ND-~~al~~A~vgia~~~~~~~ 357 (608)
|..+++.++.. | +.+..+|||.|| +|+++....-++|...+=+
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 65555555432 2 268889999999 6778777777887655533
No 184
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=94.82 E-value=0.3 Score=54.91 Aligned_cols=192 Identities=12% Similarity=0.157 Sum_probs=102.5
Q ss_pred HHHHHHHhhhhhceeeeCCccccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEE
Q psy16789 35 TGTLLEVGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFF 114 (608)
Q Consensus 35 ~~~ll~~~~l~n~a~~~~~~~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~ 114 (608)
..+++..+++|+.+. .+|++.|++.++.+.|.+....+++..+..||++.+|++.+.+. +| ..
T Consensus 328 ~~~ll~~aa~~~~~s-------~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--------~~ 390 (675)
T TIGR01497 328 EKTLADAAQLASLAD-------DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--------RM 390 (675)
T ss_pred HHHHHHHHHHhcCCC-------CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--------eE
Confidence 346778888887542 36888899999988776432233456678999999888876443 22 35
Q ss_pred Eccchhh-hhccccceeeeccccCCCccHHHHHHHHHHcCccccc--cccccceeeeCChHHHHHHhHhhhcCCcCCCCc
Q psy16789 115 FLHRLLE-VGCVCNNASIIGDSLLGQPTEGALLAAGMKFGLYAVN--EHYVRLKEYPFSSEQKMMAVRVHKIGHNLPSKR 191 (608)
Q Consensus 115 ~~kg~~e-i~~lc~~a~~~~~~~~gdp~E~Al~~~~~~~~~~~~~--~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~kg 191 (608)
+.||++| +...|+.. +...-+..+.++-+++. .|..... .+.+.+..+.+.
T Consensus 391 ~~kGa~e~i~~~~~~~----g~~~~~~~~~~~~~~a~-~G~r~l~va~~~~~lG~i~l~--------------------- 444 (675)
T TIGR01497 391 IRKGAVDAIKRHVEAN----GGHIPTDLDQAVDQVAR-QGGTPLVVCEDNRIYGVIYLK--------------------- 444 (675)
T ss_pred EEECCHHHHHHHHHhc----CCCCcHHHHHHHHHHHh-CCCeEEEEEECCEEEEEEEec---------------------
Confidence 7899999 77777531 10000111222222322 1221100 000111111110
Q ss_pred hhHHHHhhhhhhhHHHhhccCceEEEEEccCC---CCceEEEEeeecCCCChh-HHHHHHHHHhCCCeEEEEcCCcHHHH
Q psy16789 192 DGKMILSQSCSEYPKFQTLGKGLVAMARGSNL---QDLCYMGLVGICDPPRPH-VRECMSTLLQSGVKVKLVTGDGQETA 267 (608)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e---~~l~~~G~~~~~d~~r~~-~~~~I~~l~~~Gi~v~~~TGd~~~ta 267 (608)
+.+-+...+.++++.+.|.++..+.-...+ .=-.-+|+-.+.-...|+ =.+.++++++.|- .++.+||...-+
T Consensus 445 --D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~PedK~~~v~~lq~~g~-~VamvGDG~NDa 521 (675)
T TIGR01497 445 --DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALIRQEQAEGK-LVAMTGDGTNDA 521 (675)
T ss_pred --ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCCHHHHHHHHHHHHHcCC-eEEEECCCcchH
Confidence 112223445677777888888766654210 000001221111233333 4567888888875 577889988888
Q ss_pred HHHHH
Q psy16789 268 TAIAS 272 (608)
Q Consensus 268 ~~ia~ 272 (608)
.++++
T Consensus 522 pAL~~ 526 (675)
T TIGR01497 522 PALAQ 526 (675)
T ss_pred HHHHh
Confidence 77764
No 185
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.46 E-value=0.14 Score=52.63 Aligned_cols=91 Identities=11% Similarity=0.057 Sum_probs=67.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----cCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM----VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
++.++++++++.|+++|+.+.++|..+...+..+.+. +|+......+ ...+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~-------------------------~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDAR-------------------------SINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEE-------------------------EEec
Confidence 3578999999999999999999999999999998887 6665432111 1223
Q ss_pred hhHHHHHHHH-HH---CCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 313 RHKLTIVKAF-QA---NGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 313 ~~K~~~v~~l-~~---~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
+.|.+.++.+ ++ ....++++||...|+.+.+.+...+.+.
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 3444434333 32 2467999999999999999888776554
No 186
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=94.36 E-value=0.076 Score=52.06 Aligned_cols=94 Identities=10% Similarity=0.046 Sum_probs=58.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++-+++.++++.|++. +++.++|+.+.. .+..|+......++..++..... ..|+-=.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~K----------------P~p~~~~ 170 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSK----------------PFSDMYH 170 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCC----------------CcHHHHH
Confidence 4568999999999875 899999986654 25567755444444333322111 0011111
Q ss_pred HHHHHHHHCCCEEEEEcCC-cCcHHHHHhCCeeEEeC
Q psy16789 317 TIVKAFQANGVIVGMTGDG-VNDGVALKKADIGIAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg-~ND~~al~~A~vgia~~ 352 (608)
.+.+.+.-....++|+||+ ..|+.+-+.||+-....
T Consensus 171 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 171 LAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 2222222234679999999 59999999999765543
No 187
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=94.24 E-value=0.078 Score=51.54 Aligned_cols=88 Identities=20% Similarity=0.197 Sum_probs=56.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHcCCCCCCCccccchhh-cccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQE---TATAIASMVGLDTIHGKVLSGDQI-DQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---ta~~ia~~~gi~~~~~~vi~g~~~-~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
+.-|++.+.++.++++|++|+.+|||+.. .+..-.++.|.......++.++.- ... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~-----------------~~~ 177 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKK-----------------SAV 177 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS---------------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccc-----------------ccc
Confidence 44578999999999999999999999744 333445566765533333222211 000 012
Q ss_pred hhHHHHHHHHHHCCCEEEE-EcCCcCcHHH
Q psy16789 313 RHKLTIVKAFQANGVIVGM-TGDGVNDGVA 341 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~-~GDg~ND~~a 341 (608)
+-|...-+.+++.|+.+.+ +||..+|..-
T Consensus 178 ~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 2477777888888766555 9999999875
No 188
>PLN02645 phosphoglycolate phosphatase
Probab=94.00 E-value=0.12 Score=52.83 Aligned_cols=51 Identities=22% Similarity=0.292 Sum_probs=41.1
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHcCCCCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA---SMVGLDTIH 280 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia---~~~gi~~~~ 280 (608)
|++.-.+.+-+++.++|+.|++.|++++++|++...+...++ +++|+....
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~ 90 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTE 90 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 666666778899999999999999999999999966666655 567875443
No 189
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.99 E-value=0.2 Score=45.06 Aligned_cols=104 Identities=20% Similarity=0.244 Sum_probs=67.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHc---CCCCCCCccccc-hhhcccCHHHHHHHhhcceEEE
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT---AIASMV---GLDTIHGKVLSG-DQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~~---gi~~~~~~vi~g-~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
|..++++.+..+++++.|.+++.+|+|+.-.+. ....+. |..-+.+.++.. +.+- ..+.. .+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~--------~al~r-Evi~ 96 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLF--------SALHR-EVIS 96 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchh--------hhhhc-cccc
Confidence 688999999999999999999999999855443 333333 212222222222 1111 11000 1344
Q ss_pred EeCchhHHHHHHHHHHC----C-CEEEEEcCCcCcHHHHHhCCee
Q psy16789 309 RVTPRHKLTIVKAFQAN----G-VIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 309 r~~p~~K~~~v~~l~~~----g-~~v~~~GDg~ND~~al~~A~vg 348 (608)
+-+.+.|....+.++.. + ..++..|...+|+.+.+++++.
T Consensus 97 ~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 97 KDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44556788888888764 3 4566699999999999988864
No 190
>PHA02597 30.2 hypothetical protein; Provisional
Probab=93.18 E-value=0.2 Score=47.46 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=56.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCC----CccccchhhcccCHHHHHHHhhcceEEEEeCc
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIH----GKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTP 312 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p 312 (608)
++.|++.+.+++|++.+ +.+++|..+........+.+|+.... +.++++++. .|
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---------------------~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---------------------ES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---------------------cc
Confidence 36799999999999985 56777775555444455566664211 122222211 12
Q ss_pred hhHHHHHH-HHHHCC-CEEEEEcCCcCcHHHHHhC--CeeEEe
Q psy16789 313 RHKLTIVK-AFQANG-VIVGMTGDGVNDGVALKKA--DIGIAM 351 (608)
Q Consensus 313 ~~K~~~v~-~l~~~g-~~v~~~GDg~ND~~al~~A--~vgia~ 351 (608)
|.+++. .+++.| ..++++||..+|+.+-++| |+-...
T Consensus 132 --kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 132 --KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred --cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 333333 333333 4588999999999999999 975443
No 191
>KOG3040|consensus
Probab=93.07 E-value=0.47 Score=44.14 Aligned_cols=52 Identities=31% Similarity=0.409 Sum_probs=42.9
Q ss_pred ceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH---cCCC
Q psy16789 226 LCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM---VGLD 277 (608)
Q Consensus 226 l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---~gi~ 277 (608)
+.+-|++.++|..-|+..|+++.|++++.+|..+|....+.-+.+.++ +|+.
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 356799999999999999999999999999999988776666655544 5663
No 192
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=93.06 E-value=0.65 Score=45.74 Aligned_cols=88 Identities=22% Similarity=0.292 Sum_probs=52.7
Q ss_pred cCCCChhHHHHHHHHHhCCCeEEEEcCCcHH----HHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEe
Q psy16789 235 CDPPRPHVRECMSTLLQSGVKVKLVTGDGQE----TATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 235 ~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~----ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~ 310 (608)
+.|.-+++.+..+.+++.|++|+.+|||... |..++ ++.|.......++.+..-.. .. .
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~-~~---------------~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNS-AE---------------N 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCc-cc---------------h
Confidence 3566789999999999999999999999854 33333 34677543222221110000 00 0
Q ss_pred CchhHHHHHHHHHHCCCEE-EEEcCCcCcH
Q psy16789 311 TPRHKLTIVKAFQANGVIV-GMTGDGVNDG 339 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v-~~~GDg~ND~ 339 (608)
..+.|...=+.+.+.|+.+ +.+||..+|.
T Consensus 206 av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0122444445555677665 4599999987
No 193
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=92.88 E-value=1.3 Score=44.47 Aligned_cols=92 Identities=16% Similarity=0.248 Sum_probs=57.6
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceE
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT---AIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTV 306 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 306 (608)
|++.-.+.+-+++.++|++|+++|++++++||+...+.. .-.+.+|+......+++...
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~------------------ 72 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSAL------------------ 72 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHH------------------
Confidence 555556777788999999999999999999997643332 33456787654333322111
Q ss_pred EEEeCchhHHHHHHHHHH---CCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 307 FYRVTPRHKLTIVKAFQA---NGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 307 ~~r~~p~~K~~~v~~l~~---~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
.+.+.+++ .+..|.++|+. .....++.+++-+.
T Consensus 73 ----------~~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 73 ----------CAARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred ----------HHHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 12234444 24678888875 34555666665543
No 194
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=92.85 E-value=0.63 Score=45.93 Aligned_cols=55 Identities=13% Similarity=0.160 Sum_probs=44.1
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHcCCCCCCCccc
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVTG---DGQETATAIASMVGLDTIHGKVL 284 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~~~~~~vi 284 (608)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+++|+....+.++
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ii 67 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVF 67 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe
Confidence 55555666677999999999999999999996 77888888888899876544443
No 195
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=92.78 E-value=0.38 Score=41.80 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=28.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETA 267 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta 267 (608)
+++.+++.+++++++++|+.++++|||+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 55788999999999999999999999987643
No 196
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.58 E-value=0.66 Score=42.48 Aligned_cols=112 Identities=18% Similarity=0.225 Sum_probs=77.9
Q ss_pred HhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCC--eEEEEcCC-------cHHHHHHHHHHcCCC
Q psy16789 207 FQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGV--KVKLVTGD-------GQETATAIASMVGLD 277 (608)
Q Consensus 207 ~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi--~v~~~TGd-------~~~ta~~ia~~~gi~ 277 (608)
+.+.|.+.+.+-...- | ..-=++.+.++..+.+++|++.+. +|.++|.. +...|..+.+.+|+.
T Consensus 36 Lk~~Gik~li~DkDNT---L----~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNT---L----TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred hhhcCceEEEEcCCCC---C----CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 5567888776654421 0 012346788999999999999986 59999986 488899999999986
Q ss_pred CCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHC-----CCEEEEEcCCc-CcHHHHHhCC-eeEE
Q psy16789 278 TIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQAN-----GVIVGMTGDGV-NDGVALKKAD-IGIA 350 (608)
Q Consensus 278 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~-----g~~v~~~GDg~-ND~~al~~A~-vgia 350 (608)
.- ....-.|....++.+.++.. .+.++|+||-. .|+-+-...| .+|=
T Consensus 109 vl--------------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~til 162 (168)
T PF09419_consen 109 VL--------------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTIL 162 (168)
T ss_pred EE--------------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEE
Confidence 20 01112465556778887765 56799999985 6887777666 4443
Q ss_pred e
Q psy16789 351 M 351 (608)
Q Consensus 351 ~ 351 (608)
+
T Consensus 163 v 163 (168)
T PF09419_consen 163 V 163 (168)
T ss_pred E
Confidence 3
No 197
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=91.69 E-value=0.39 Score=47.79 Aligned_cols=54 Identities=19% Similarity=0.302 Sum_probs=46.9
Q ss_pred CC-hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcc
Q psy16789 238 PR-PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQ 291 (608)
Q Consensus 238 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~ 291 (608)
+| |++.+++++|+++|+++.++|+.....+....+.+|+......++++.+...
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 55 9999999999999999999999999999999999999977666776666543
No 198
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=91.56 E-value=0.14 Score=47.41 Aligned_cols=86 Identities=16% Similarity=0.174 Sum_probs=57.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++ ++.++|+-+........+..|+......++++++..... ..|+-=.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~K----------------P~p~~f~ 146 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYK----------------PDPVVYE 146 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCC----------------CCHHHHH
Confidence 46789999988 367899999988888899999876555555555432211 1122112
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKA 345 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A 345 (608)
.+.+.+.-....++|+||+..|+.+-+++
T Consensus 147 ~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 147 LVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 33344433456799999999999876643
No 199
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=91.38 E-value=0.57 Score=45.26 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=66.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
++.+++.++++.+++. .++.++|.-....+....+++|+....+.++..++.... .|..+.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~------------------KP~~~~ 159 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVA------------------KPDPEI 159 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccC------------------CCCcHH
Confidence 4568889999999998 999999998888889999999987776666555544321 132221
Q ss_pred --HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee-EEeC
Q psy16789 317 --TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG-IAMG 352 (608)
Q Consensus 317 --~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg-ia~~ 352 (608)
.+.+.+.-....++++||+. ||+..-+++|.- +-+.
T Consensus 160 f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 160 FEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 23333333356799999985 674666667754 3443
No 200
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=89.49 E-value=1.8 Score=42.25 Aligned_cols=64 Identities=25% Similarity=0.200 Sum_probs=31.3
Q ss_pred EEEEeCchhHHHHHHHHHHC-C------CEEEEEcCCcCcHHHHHhC------CeeEEeCCCCcHHHHhccCEEEec
Q psy16789 306 VFYRVTPRHKLTIVKAFQAN-G------VIVGMTGDGVNDGVALKKA------DIGIAMGKQGTDVCKEAADMILVD 369 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~~~-g------~~v~~~GDg~ND~~al~~A------~vgia~~~~~~~~a~~~ad~v~~~ 369 (608)
+-.|..-..|..+++.+-+. + ..++++||...|-.|++.. ++++-++.........+|+|-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 34455555799999877665 3 2688899999999998873 567777732223334466666544
No 201
>PLN02151 trehalose-phosphatase
Probab=89.33 E-value=7 Score=40.41 Aligned_cols=35 Identities=14% Similarity=0.283 Sum_probs=29.6
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM 273 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~ 273 (608)
+.+++.++|+.|. ++..+.++|||+.........-
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~ 155 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKL 155 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCC
Confidence 6688999999999 5679999999999988777643
No 202
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=89.22 E-value=0.83 Score=45.55 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=44.1
Q ss_pred CC-hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhh
Q psy16789 238 PR-PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQI 289 (608)
Q Consensus 238 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~ 289 (608)
+| |++.+++++|+++|+++.++|+.+...+....+..|+......++.+++.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i 200 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRK 200 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCc
Confidence 45 99999999999999999999988888889999999998765556555544
No 203
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=88.13 E-value=5.9 Score=43.16 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=62.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-cCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE------e
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM-VGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR------V 310 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r------~ 310 (608)
++++..+ .++++|.+ +++|+-....++.+|++ +|++. ++ |.+++... +-..-.+ +
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~~---------~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL-GTELEVSK---------SGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE-ecccEECc---------CCEEeeeecCCCCC
Confidence 4555444 55667854 99999999999999987 79874 11 22221100 0001111 2
Q ss_pred CchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCC
Q psy16789 311 TPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGK 353 (608)
Q Consensus 311 ~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~ 353 (608)
.-++|.+.++..........+.||+.||.+|++.|+.+++++.
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 4456877666332212223689999999999999999999983
No 204
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=87.67 E-value=4 Score=40.43 Aligned_cols=139 Identities=16% Similarity=0.183 Sum_probs=82.4
Q ss_pred HHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHcCC--CCCCC
Q psy16789 205 PKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQS-GVKVKLVTGDGQETATAIASMVGL--DTIHG 281 (608)
Q Consensus 205 ~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~~gi--~~~~~ 281 (608)
+.+...+-|.+.+-|.. -|+-+.--.....+-++..+.+++|... ..-++++||++.........-.|+ ...++
T Consensus 11 ~~~~~a~~~~~~lDyDG---Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehG 87 (266)
T COG1877 11 EPYLNARKRLLFLDYDG---TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHG 87 (266)
T ss_pred cccccccceEEEEeccc---cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecc
Confidence 33444444555554442 1222222334556889999999999988 467999999999998888764444 22222
Q ss_pred ccc---cchhhcccCH------------------------------------------HH-----HHHHh----------
Q psy16789 282 KVL---SGDQIDQMTE------------------------------------------HQ-----LQQVV---------- 301 (608)
Q Consensus 282 ~vi---~g~~~~~~~~------------------------------------------~~-----~~~~~---------- 301 (608)
..+ +|.......+ ++ +....
T Consensus 88 a~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v 167 (266)
T COG1877 88 AEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRV 167 (266)
T ss_pred eEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEE
Confidence 211 2222111110 00 00000
Q ss_pred --hcceEEEEeCchhHHHHHHHHHHC----CCEEEEEcCCcCcHHHHHhCC
Q psy16789 302 --NSVTVFYRVTPRHKLTIVKAFQAN----GVIVGMTGDGVNDGVALKKAD 346 (608)
Q Consensus 302 --~~~~v~~r~~p~~K~~~v~~l~~~----g~~v~~~GDg~ND~~al~~A~ 346 (608)
.+..|-+|.+-..|..+++.+.+. |..+.+.||...|-.|++..+
T Consensus 168 ~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 168 TPGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred EeCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 112256677777899888865543 335889999999999999887
No 205
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=87.06 E-value=1.8 Score=44.59 Aligned_cols=105 Identities=18% Similarity=0.191 Sum_probs=67.5
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc-C-------CCCCCCccccchh----------hcccCHH----H
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV-G-------LDTIHGKVLSGDQ----------IDQMTEH----Q 296 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-g-------i~~~~~~vi~g~~----------~~~~~~~----~ 296 (608)
-|++++.+++|+++|+++.++|+.+...+..+.+.+ | +....+.++++.. +...+.+ .
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 589999999999999999999999999999999986 6 4444444444332 1111110 0
Q ss_pred HHHH--hhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCc-CcHHHHH-hCC
Q psy16789 297 LQQV--VNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGV-NDGVALK-KAD 346 (608)
Q Consensus 297 ~~~~--~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~-ND~~al~-~A~ 346 (608)
.... +.+-.|++.-+- ..+.+.+...+..|+++||.. .|+-.-+ .++
T Consensus 266 ~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~G 316 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRG 316 (343)
T ss_pred CCccccccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcC
Confidence 0000 122234443322 234555566789999999996 5887666 566
No 206
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=86.84 E-value=14 Score=36.70 Aligned_cols=110 Identities=16% Similarity=0.235 Sum_probs=71.4
Q ss_pred EEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----cCCCCCCCccccchhhcccCHHHHHHHhhc
Q psy16789 228 YMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASM----VGLDTIHGKVLSGDQIDQMTEHQLQQVVNS 303 (608)
Q Consensus 228 ~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 303 (608)
+=|++.-.+.+-|++.++|+.|+++|++++.+|..+..+...++++ .+++...+.+++...
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~--------------- 79 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGD--------------- 79 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHH---------------
Confidence 3477888888999999999999999999999998776655544433 344333322222111
Q ss_pred ceEEEEeCchhHHHHHHHHHHC--CCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCC
Q psy16789 304 VTVFYRVTPRHKLTIVKAFQAN--GVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDD 371 (608)
Q Consensus 304 ~~v~~r~~p~~K~~~v~~l~~~--g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~ 371 (608)
...+.+++. +.+|.++|.. .+...++.+|+-+.-..+. . ..|+|+...+
T Consensus 80 -------------at~~~l~~~~~~~kv~viG~~-~l~~~l~~~G~~~~~~~~~--~---~~d~Vv~g~d 130 (269)
T COG0647 80 -------------ATADYLAKQKPGKKVYVIGEE-GLKEELEGAGFELVDEEEP--A---RVDAVVVGLD 130 (269)
T ss_pred -------------HHHHHHHhhCCCCEEEEECCc-chHHHHHhCCcEEeccCCC--C---cccEEEEecC
Confidence 223445543 3689999954 6778888888777754122 1 2576665433
No 207
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=86.75 E-value=2.1 Score=39.63 Aligned_cols=97 Identities=19% Similarity=0.211 Sum_probs=55.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCH---HHHHHHhhc--ceEEEEeCc
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTE---HQLQQVVNS--VTVFYRVTP 312 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~---~~~~~~~~~--~~v~~r~~p 312 (608)
+.+++.+++.+++++|.+++|+|.- -|+.... .+..++..... ..+.+.--+ ...+|.-.|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgy---f~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p 97 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGY---FTEADFDKLHNKMLKILASQGVKIDGILYCPHHP 97 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccC---ccHHHHHHHHHHHHHHHHHcCCccceEEECCCCC
Confidence 4689999999999999999999852 2222111 11111111110 001110000 013333333
Q ss_pred hh--------HHHHHHHHHHCC---CEEEEEcCCcCcHHHHHhCCee
Q psy16789 313 RH--------KLTIVKAFQANG---VIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 313 ~~--------K~~~v~~l~~~g---~~v~~~GDg~ND~~al~~A~vg 348 (608)
++ ...+.+.+++.+ ....++||...|..+-..|+++
T Consensus 98 ~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 98 EDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 32 234455556554 6788999999999999999987
No 208
>KOG3085|consensus
Probab=86.68 E-value=1.7 Score=42.08 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=67.2
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHH
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTI 318 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~ 318 (608)
-++..+++++||++|..+.++|.=....- .+-..+|+....+.++.+-+.....+ .|.-=...
T Consensus 115 ~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~e~g~~KP----------------Dp~If~~a 177 (237)
T KOG3085|consen 115 LDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESCEVGLEKP----------------DPRIFQLA 177 (237)
T ss_pred ccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhhhhccCCC----------------ChHHHHHH
Confidence 35666999999999988888886554443 77777888655544444333322211 12222245
Q ss_pred HHHHHHCCCEEEEEcCC-cCcHHHHHhCCe-eEEeCCCCcHHHHh
Q psy16789 319 VKAFQANGVIVGMTGDG-VNDGVALKKADI-GIAMGKQGTDVCKE 361 (608)
Q Consensus 319 v~~l~~~g~~v~~~GDg-~ND~~al~~A~v-gia~~~~~~~~a~~ 361 (608)
++.+......++++||. .||...-+.+|. ++-+. +.....++
T Consensus 178 l~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~-~~~~~~~~ 221 (237)
T KOG3085|consen 178 LERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD-NSITALKE 221 (237)
T ss_pred HHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc-cccchhhh
Confidence 55566667789999997 699999999984 55554 54444433
No 209
>KOG0205|consensus
Probab=85.32 E-value=1.2 Score=48.55 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=40.6
Q ss_pred hhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhh-hhccccc
Q psy16789 75 AVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCNN 128 (608)
Q Consensus 75 ~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~~ 128 (608)
+.+..+..++=+|||+..|+.+.-+.+.+|+ .....||+|| ++.+|+.
T Consensus 391 eara~ikevhF~PFnPV~Krta~ty~d~dG~------~~r~sKGAPeqil~l~~~ 439 (942)
T KOG0205|consen 391 EARAGIKEVHFLPFNPVDKRTALTYIDPDGN------WHRVSKGAPEQILKLCNE 439 (942)
T ss_pred HHhhCceEEeeccCCccccceEEEEECCCCC------EEEecCCChHHHHHHhhc
Confidence 4456666777789999999999999998877 3667899999 9999997
No 210
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=83.05 E-value=2.2 Score=46.74 Aligned_cols=40 Identities=25% Similarity=0.392 Sum_probs=32.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHHHcCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQ------------ETATAIASMVGLD 277 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~------------~ta~~ia~~~gi~ 277 (608)
+-+++++++++|+++|++++++|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997544 3456677777764
No 211
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=82.01 E-value=1.3 Score=40.54 Aligned_cols=92 Identities=15% Similarity=0.103 Sum_probs=62.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC-CCCccccchhhcccCHHHHHHHhhcceEEEEeCchh
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT-IHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRH 314 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 314 (608)
=..||++.+.++.|.+. ..+++.|......|..+.+.++... ....++..+..... .+
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~------------------~~-- 99 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT------------------NG-- 99 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe------------------CC--
Confidence 35799999999999987 9999999999999999999988754 22233332221110 01
Q ss_pred HHHHHHHHH---HCCCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 315 KLTIVKAFQ---ANGVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 315 K~~~v~~l~---~~g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
..++.+. .....|.++||...|..+-+.+++-+.
T Consensus 100 --~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 100 --KYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred --CEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 1222222 334679999999998877666655444
No 212
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=81.54 E-value=7.7 Score=37.82 Aligned_cols=50 Identities=24% Similarity=0.362 Sum_probs=37.5
Q ss_pred EEeeecCCCChhHHHHHHHHHhCCCeEEEEc---CCcHHHHHHHHHH-cCCCCC
Q psy16789 230 GLVGICDPPRPHVRECMSTLLQSGVKVKLVT---GDGQETATAIASM-VGLDTI 279 (608)
Q Consensus 230 G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~-~gi~~~ 279 (608)
|++.-.+.+-+++.++|+.++++|++++++| |+..........+ .|+...
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~ 60 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVS 60 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 5555556677899999999999999999998 6666655554444 677543
No 213
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=81.22 E-value=3.8 Score=37.27 Aligned_cols=91 Identities=22% Similarity=0.298 Sum_probs=61.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQ----ETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
|++-+++.|..-++.|=.+..+|||.. .+++.+|+...|...+.....|+.-. ...-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k-------------------~~qy 175 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKPK-------------------PGQY 175 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCCC-------------------cccc
Confidence 556667888888899999999999974 45667788888866554433333211 0111
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCe-eEEe
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKADI-GIAM 351 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~v-gia~ 351 (608)
.| ...+|+++. -..-||+-||+.|-++|++ ||-+
T Consensus 176 ~K---t~~i~~~~~-~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 176 TK---TQWIQDKNI-RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred cc---cHHHHhcCc-eEEecCCchhhhHHHhcCccceeE
Confidence 23 445565544 3457999999999999985 5655
No 214
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=78.16 E-value=7.3 Score=42.76 Aligned_cols=54 Identities=30% Similarity=0.323 Sum_probs=40.5
Q ss_pred cccCchHHHHHHHHHhcCchhhhhhcccccccccccccccceeeecCCCCCccccceEEEEccchhh-hhcccc
Q psy16789 55 LLGQPTEGALLAAGMKFGLYAVNEHYVRLKEYPFSSEQKMMAVRCIPKEGSSCDVDTRFFFLHRLLE-VGCVCN 127 (608)
Q Consensus 55 ~~G~pte~All~~~~~~g~~~~~~~~~~v~~~pF~s~~k~m~v~~~~~~gt~~~~~~~~~~~kg~~e-i~~lc~ 127 (608)
..|+|.|.|++.++... .....||++.+++|++++...++ .+.||+++ +...|.
T Consensus 259 ~s~hp~~~ai~~~~~~~----------~~~~~~f~~~~~~~~~~~~~~~~---------~~~~G~~~~i~~~~~ 313 (499)
T TIGR01494 259 LSGHPDERALVKSAKWK----------ILNVFEFSSVRKRMSVIVRGPDG---------TYVKGAPEFVLSRVK 313 (499)
T ss_pred CCCChHHHHHHHHhhhc----------CcceeccCCCCceEEEEEecCCc---------EEEeCCHHHHHHhhH
Confidence 46899999999887642 23467999999999998875321 25799999 777774
No 215
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=74.76 E-value=2 Score=33.36 Aligned_cols=52 Identities=23% Similarity=0.236 Sum_probs=33.0
Q ss_pred HHHHHHHHCCCEEEEEcCC-cCcHHHHHhCCee-EEe--CCCCcHHH---HhccCEEEe
Q psy16789 317 TIVKAFQANGVIVGMTGDG-VNDGVALKKADIG-IAM--GKQGTDVC---KEAADMILV 368 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg-~ND~~al~~A~vg-ia~--~~~~~~~a---~~~ad~v~~ 368 (608)
.+.+.+......+.|+||. ..|+.+-+++|+- |.+ |....+.. ...+|+++.
T Consensus 12 ~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 12 QALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 3344443335679999999 9999999999953 333 32222222 257888875
No 216
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=68.01 E-value=35 Score=33.33 Aligned_cols=134 Identities=20% Similarity=0.191 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchh-hcccCHHHHHHHhhcceEEEE--eCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQ-IDQMTEHQLQQVVNSVTVFYR--VTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~-~~~~~~~~~~~~~~~~~v~~r--~~p~ 313 (608)
.+|+++.+.++.|++.+|++.++|+-=-.....+-++-|...++-.+++-.- +++. ..+.-|.. ..+-
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~---------g~l~gF~~~lIH~~ 160 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDED---------GVLVGFKGPLIHTF 160 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TT---------SBEEEE-SS---TT
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCc---------ceEeecCCCceEEe
Confidence 4799999999999999999999998877777777777787766544442110 1000 00000000 0111
Q ss_pred hHHHH-H---HHHHHC--CCEEEEEcCCcCcHHHHHhC-C--eeEEeC-CCCc-----HHHHhccCEEEecCCcchHHHH
Q psy16789 314 HKLTI-V---KAFQAN--GVIVGMTGDGVNDGVALKKA-D--IGIAMG-KQGT-----DVCKEAADMILVDDDFNTIIAA 378 (608)
Q Consensus 314 ~K~~~-v---~~l~~~--g~~v~~~GDg~ND~~al~~A-~--vgia~~-~~~~-----~~a~~~ad~v~~~~~~~~i~~~ 378 (608)
.|.+- + ...++. ...|+..||+..|+.|-... + .-+.+| -|+. +.-+++=|+|+.++.=-.++..
T Consensus 161 NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v~~~ 240 (246)
T PF05822_consen 161 NKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDVPNA 240 (246)
T ss_dssp -HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HHHHH
T ss_pred eCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchHHHH
Confidence 23321 1 122222 35689999999999997666 2 222221 0222 2345677999987764444444
Q ss_pred H
Q psy16789 379 I 379 (608)
Q Consensus 379 i 379 (608)
|
T Consensus 241 i 241 (246)
T PF05822_consen 241 I 241 (246)
T ss_dssp H
T ss_pred H
Confidence 4
No 217
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=66.77 E-value=2.9 Score=40.96 Aligned_cols=96 Identities=11% Similarity=0.047 Sum_probs=50.0
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHH
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTI 318 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~ 318 (608)
-++..++++.+++.|++. ++|+.+...+.......|.... + ..+...-.+........|+-=..+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~---------~-----~~i~~~g~~~~~~gKP~~~~~~~~ 204 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYY---------A-----ELIKQLGGKVIYSGKPYPAIFHKA 204 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHH---------H-----HHHHHhCCcEecCCCCCHHHHHHH
Confidence 478899999999999997 6787665544322222221100 0 000000000001111112211223
Q ss_pred HHHHHHC-CCEEEEEcCC-cCcHHHHHhCCeeE
Q psy16789 319 VKAFQAN-GVIVGMTGDG-VNDGVALKKADIGI 349 (608)
Q Consensus 319 v~~l~~~-g~~v~~~GDg-~ND~~al~~A~vgi 349 (608)
.+.+... ...+.|+||+ .+|+.+-+.|++-.
T Consensus 205 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 205 LKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 3333222 3479999999 59999999998754
No 218
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=65.86 E-value=1.1e+02 Score=29.13 Aligned_cols=9 Identities=0% Similarity=0.084 Sum_probs=4.2
Q ss_pred HHHHHHhhh
Q psy16789 585 KKAIERICE 593 (608)
Q Consensus 585 ~K~~~r~~~ 593 (608)
..+++|++.
T Consensus 194 ~~~lkkk~~ 202 (206)
T PF06570_consen 194 RFYLKKKYN 202 (206)
T ss_pred HHHHHHHhC
Confidence 344555543
No 219
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=64.19 E-value=35 Score=34.09 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=23.6
Q ss_pred HHHHHHHHCCCEEEEEcCCc-CcHHHHHhCCee
Q psy16789 317 TIVKAFQANGVIVGMTGDGV-NDGVALKKADIG 348 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~vg 348 (608)
.+.+.+.-....++|+||.. .|+.+-+.|++-
T Consensus 210 ~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~ 242 (279)
T TIGR01452 210 CITENFSIDPARTLMVGDRLETDILFGHRCGMT 242 (279)
T ss_pred HHHHHhCCChhhEEEECCChHHHHHHHHHcCCc
Confidence 33444433457899999995 999999999954
No 220
>KOG2914|consensus
Probab=63.70 E-value=22 Score=34.24 Aligned_cols=115 Identities=16% Similarity=0.096 Sum_probs=69.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcC-CCCCCCccc--cchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVG-LDTIHGKVL--SGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g-i~~~~~~vi--~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
.+.+|+.+.++.|+..|+++-++|+.+..+...--+..+ +......++ ++.++..-. ..|+
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gK----------------P~Pd 155 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGK----------------PDPD 155 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCC----------------CCch
Confidence 345799999999999999999999997666654443333 433222222 244443321 2233
Q ss_pred hHHHHHHHHHHCC-CEEEEEcCCcCcHHHHHhCCeeEEeCCC--CcHHHHhccCEEE
Q psy16789 314 HKLTIVKAFQANG-VIVGMTGDGVNDGVALKKADIGIAMGKQ--GTDVCKEAADMIL 367 (608)
Q Consensus 314 ~K~~~v~~l~~~g-~~v~~~GDg~ND~~al~~A~vgia~~~~--~~~~a~~~ad~v~ 367 (608)
-=....+.+.... ..++++.|..+=+.|-+.|+.-+-+-.+ -.......+++++
T Consensus 156 i~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~ 212 (222)
T KOG2914|consen 156 IYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLIL 212 (222)
T ss_pred HHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceec
Confidence 3334445555555 7788888888888888888855544312 2333344445544
No 221
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=58.83 E-value=62 Score=29.73 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=31.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEc-CCcHHHHHHHHHHcCCC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVT-GDGQETATAIASMVGLD 277 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~T-Gd~~~ta~~ia~~~gi~ 277 (608)
+-+++++.++.|++.|+++.++| -+.+.-|+.+-+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 56999999999999999999999 57789999999999998
No 222
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=58.66 E-value=54 Score=33.57 Aligned_cols=51 Identities=20% Similarity=0.330 Sum_probs=40.3
Q ss_pred EEEeeecCCCChhHHHHHHHHHhC----CCeEEEEcCCc---HHH-HHHHHHHcCCCCC
Q psy16789 229 MGLVGICDPPRPHVRECMSTLLQS----GVKVKLVTGDG---QET-ATAIASMVGLDTI 279 (608)
Q Consensus 229 ~G~~~~~d~~r~~~~~~I~~l~~~----Gi~v~~~TGd~---~~t-a~~ia~~~gi~~~ 279 (608)
=|++.-.+++-+++.++++.|++. |+++..+|... ..+ +..+.+++|+...
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~ 66 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVS 66 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCC
Confidence 477777888999999999999999 99999998654 443 5556678888643
No 223
>KOG3109|consensus
Probab=58.18 E-value=67 Score=30.69 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=71.3
Q ss_pred eeecCCCChh--HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE
Q psy16789 232 VGICDPPRPH--VRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR 309 (608)
Q Consensus 232 ~~~~d~~r~~--~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r 309 (608)
+.+++ ++|+ .++.+-.|+..+ -|++|.-...-|..+-+.+||.+-...++.-+..+.. +..++|.
T Consensus 94 LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~----------~~~~vcK 160 (244)
T KOG3109|consen 94 LPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI----------EKTVVCK 160 (244)
T ss_pred CcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC----------CCceeec
Confidence 44455 5554 467777777765 8999999999999999999998755555544444432 2347777
Q ss_pred eCchhHHHHHHHHHHC-CCEEEEEcCCcCcHHHHHhCCee
Q psy16789 310 VTPRHKLTIVKAFQAN-GVIVGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 310 ~~p~~K~~~v~~l~~~-g~~v~~~GDg~ND~~al~~A~vg 348 (608)
.+|+.=....+...-. ...+.++-|+.+.+..-++.|..
T Consensus 161 P~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~ 200 (244)
T KOG3109|consen 161 PSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLK 200 (244)
T ss_pred CCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccce
Confidence 6665433333333322 56799999999999988888743
No 224
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=55.33 E-value=16 Score=31.23 Aligned_cols=40 Identities=30% Similarity=0.340 Sum_probs=30.4
Q ss_pred CChhHHHHHHHHHhCCCe-EEEEcCCcHHHHHHHHHHcCCC
Q psy16789 238 PRPHVRECMSTLLQSGVK-VKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~-v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
+.+.+++.++++.+.|++ +|+.+|...+.+...+++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 457889999999999986 7888999999999999998874
No 225
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=53.00 E-value=34 Score=31.08 Aligned_cols=55 Identities=13% Similarity=0.231 Sum_probs=40.7
Q ss_pred hhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q psy16789 201 CSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIA 271 (608)
Q Consensus 201 ~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia 271 (608)
+.+++.++..|--.++++-.. -.+.+.+++++.++.|+.++.+||++--....++
T Consensus 100 sRqveA~g~~GDvLigISTSG----------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 100 SRQVEALGQPGDVLIGISTSG----------------NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred HHHHHhcCCCCCEEEEEeCCC----------------CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 446677777776666665432 2478999999999999999999999865544444
No 226
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=52.11 E-value=97 Score=30.11 Aligned_cols=86 Identities=17% Similarity=0.162 Sum_probs=53.9
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHH----HHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCch
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQET----ATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPR 313 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t----a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~ 313 (608)
+-+++.+-++..-+.|..|..+|.|..+. ...-.++.|+...... ..++-+ .-.
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~---------------------~~llkk-~~k 180 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLES---------------------HLLLKK-DKK 180 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccccc---------------------ceEEee-CCC
Confidence 44899999999999999999999998765 3444556677543210 011111 111
Q ss_pred hHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhC
Q psy16789 314 HKLTIVKAFQANGVIVGMTGDGVNDGVALKKA 345 (608)
Q Consensus 314 ~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A 345 (608)
.|..--+.+++....|+.+||..+|-......
T Consensus 181 ~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 181 SKEVRRQAVEKDYKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred cHHHHHHHHhhccceeeEecCchhhhcchhhh
Confidence 23332334444456677799999998766543
No 227
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=51.38 E-value=72 Score=28.04 Aligned_cols=72 Identities=13% Similarity=0.092 Sum_probs=45.9
Q ss_pred HhhccCceEEEEEcc---------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCC--eEEEEcCCc---HH---HHHH
Q psy16789 207 FQTLGKGLVAMARGS---------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGV--KVKLVTGDG---QE---TATA 269 (608)
Q Consensus 207 ~~~~g~r~l~~a~~~---------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi--~v~~~TGd~---~~---ta~~ 269 (608)
+...|+.|+-++... .+.+-..+|+-++.-.--+..++.++.|+++|+ ..+++-|-. .+ .-..
T Consensus 25 l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~ 104 (134)
T TIGR01501 25 FTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEK 104 (134)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHH
Confidence 345677777666541 234566777777766667788999999999987 345566632 11 1234
Q ss_pred HHHHcCCCC
Q psy16789 270 IASMVGLDT 278 (608)
Q Consensus 270 ia~~~gi~~ 278 (608)
-++++|...
T Consensus 105 ~l~~~Gv~~ 113 (134)
T TIGR01501 105 RFKEMGFDR 113 (134)
T ss_pred HHHHcCCCE
Confidence 567788653
No 228
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.52 E-value=2.8e+02 Score=28.01 Aligned_cols=165 Identities=13% Similarity=0.164 Sum_probs=86.8
Q ss_pred hhHHHHhhhhhhhHHHhhc-cCceEEEEEccCCCCceEEEEeeecCCCChh--HHHHHHHHHhCCCeEEEE--cCC-cHH
Q psy16789 192 DGKMILSQSCSEYPKFQTL-GKGLVAMARGSNLQDLCYMGLVGICDPPRPH--VRECMSTLLQSGVKVKLV--TGD-GQE 265 (608)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~-g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~--~~~~I~~l~~~Gi~v~~~--TGd-~~~ 265 (608)
-.+.+.+++.+.++.+..+ |.+. . +..+...|.+-.. +...++.+++.||.+-.. ..+ ..+
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p------------~-La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~ 76 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTP------------G-LAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQA 76 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC------------e-EEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHH
Confidence 3446666777777777655 5443 1 3344455554433 356788889999986555 222 333
Q ss_pred HHHHHHHHcCCCCCCCccc-------------------cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH--H
Q psy16789 266 TATAIASMVGLDTIHGKVL-------------------SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ--A 324 (608)
Q Consensus 266 ta~~ia~~~gi~~~~~~vi-------------------~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~--~ 324 (608)
.....-++++-+..-+-++ ...+.+.+++..+..+..+-..|.-+||..-.++++... -
T Consensus 77 el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~ 156 (296)
T PRK14188 77 ELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGCMMLLRRVHGDL 156 (296)
T ss_pred HHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCC
Confidence 3444555554333211111 112222233333444433333455666665555555443 2
Q ss_pred CCCEEEEEcCCcC----cHHHHHhCCeeEEeCC--C-CcHHHHhccCEEEec
Q psy16789 325 NGVIVGMTGDGVN----DGVALKKADIGIAMGK--Q-GTDVCKEAADMILVD 369 (608)
Q Consensus 325 ~g~~v~~~GDg~N----D~~al~~A~vgia~~~--~-~~~~a~~~ad~v~~~ 369 (608)
.|..|.++|-+.. =+.+|..++..+.+-. + ..+.+...||+++.-
T Consensus 157 ~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 157 SGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred CCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 3889999995432 2445666776665541 1 223344578988753
No 229
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.36 E-value=2.2e+02 Score=28.57 Aligned_cols=165 Identities=14% Similarity=0.194 Sum_probs=87.3
Q ss_pred hhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhH--HHHHHHHHhCCCeEEEE--cCC-cHHH
Q psy16789 192 DGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHV--RECMSTLLQSGVKVKLV--TGD-GQET 266 (608)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~--~~~I~~l~~~Gi~v~~~--TGd-~~~t 266 (608)
-.+++.+++.+.++++..+|.+. . ++.+...|.+-..+ ...++.+++.||.+... ..+ ..+.
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p-~------------Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~ 77 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQP-G------------LAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAE 77 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-e------------EEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHH
Confidence 34466667777777776667553 1 34455556554443 66788899999987665 332 2333
Q ss_pred HHHHHHHcCCCCCC-Ccccc------------------chhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHH--HC
Q psy16789 267 ATAIASMVGLDTIH-GKVLS------------------GDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQ--AN 325 (608)
Q Consensus 267 a~~ia~~~gi~~~~-~~vi~------------------g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~--~~ 325 (608)
....-++++-+..- +..+. ..+.+.+++..+..+...-..|.-+||..-.++++..+ -.
T Consensus 78 l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~ 157 (285)
T PRK14189 78 LLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESIGIPLR 157 (285)
T ss_pred HHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCC
Confidence 44444445433321 11111 11222233333334433333455666665555555443 23
Q ss_pred CCEEEEEcCCcC----cHHHHHhCC--eeEEeCCCC-cHHHHhccCEEEec
Q psy16789 326 GVIVGMTGDGVN----DGVALKKAD--IGIAMGKQG-TDVCKEAADMILVD 369 (608)
Q Consensus 326 g~~v~~~GDg~N----D~~al~~A~--vgia~~~~~-~~~a~~~ad~v~~~ 369 (608)
|..|..+|-|.. =+.+|...+ |-++..... -...-..||+++..
T Consensus 158 Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 158 GAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 789999999854 234555544 444443221 12234688988763
No 230
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=47.36 E-value=1.9e+02 Score=24.99 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=24.8
Q ss_pred HHHHHHHHHCCCEEEEEcCCcC--cHHHHHhCCeeEEeC
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVN--DGVALKKADIGIAMG 352 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~N--D~~al~~A~vgia~~ 352 (608)
.++++.+ ..-..+...|-|.+ |..++++.|+-++-.
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 3555655 33456777888887 889999999998876
No 231
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.96 E-value=3.3e+02 Score=27.66 Aligned_cols=167 Identities=15% Similarity=0.211 Sum_probs=89.8
Q ss_pred CchhHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChh--HHHHHHHHHhCCCeEEEE--cCC-cH
Q psy16789 190 KRDGKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPH--VRECMSTLLQSGVKVKLV--TGD-GQ 264 (608)
Q Consensus 190 kg~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~--~~~~I~~l~~~Gi~v~~~--TGd-~~ 264 (608)
|.-.+.+.+++.+.++++..+|.+. . ++.+...|.+-.. +...++.+.+.||++... ..+ ..
T Consensus 10 k~iA~~i~~~lk~~i~~l~~~g~~P-~------------LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~ 76 (301)
T PRK14194 10 KAAAARVLAQVREDVRTLKAAGIEP-A------------LAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQ 76 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCC-e------------EEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCH
Confidence 3444567777777888877667553 1 3445555555443 366778888899987554 222 23
Q ss_pred HHHHHHHHHcCCCCCCC-ccc------------------cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH-
Q psy16789 265 ETATAIASMVGLDTIHG-KVL------------------SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA- 324 (608)
Q Consensus 265 ~ta~~ia~~~gi~~~~~-~vi------------------~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~- 324 (608)
+.....-++++-+..-+ ..+ ...+.+.+++..+.++...-..|.-+||..-.++++...-
T Consensus 77 ~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~ 156 (301)
T PRK14194 77 ARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGD 156 (301)
T ss_pred HHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCC
Confidence 33444444444333211 111 1122222333334444433334556677655555555432
Q ss_pred -CCCEEEEEcCC-cCc---HHHHHhCCeeEEeC--CCC-cHHHHhccCEEEec
Q psy16789 325 -NGVIVGMTGDG-VND---GVALKKADIGIAMG--KQG-TDVCKEAADMILVD 369 (608)
Q Consensus 325 -~g~~v~~~GDg-~ND---~~al~~A~vgia~~--~~~-~~~a~~~ad~v~~~ 369 (608)
.|..|+++|-| .-= +.+|.++|..+.+- ... ...+...||+++.-
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 38899999997 333 34566676666543 122 23334678988764
No 232
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=46.82 E-value=1.1e+02 Score=31.56 Aligned_cols=41 Identities=15% Similarity=0.134 Sum_probs=34.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
+|-+|.+++|+..++.|++|.++--|=.-|-+..-.++++.
T Consensus 96 ~PGsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~ 136 (388)
T COG1916 96 KPGSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFW 136 (388)
T ss_pred CChHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHH
Confidence 57899999999999999999999888777777777766653
No 233
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=46.80 E-value=1.6e+02 Score=29.54 Aligned_cols=150 Identities=13% Similarity=0.102 Sum_probs=71.6
Q ss_pred hhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCC--ChhHHHHHHHHHhCCCeEEEE--cCCcHHHHHHHHHHc
Q psy16789 199 QSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPP--RPHVRECMSTLLQSGVKVKLV--TGDGQETATAIASMV 274 (608)
Q Consensus 199 ~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~--r~~~~~~I~~l~~~Gi~v~~~--TGd~~~ta~~ia~~~ 274 (608)
+.+..+.+++++|+.++.++.+.. -...|+.+.-+.. --+..+-++.+.. .-++.++ |--+......+...+
T Consensus 101 kv~~~v~~~~~~Gy~iiiiG~~~H---pEv~gi~g~~~~~~~vv~~~~d~~~l~~-~~~v~vvsQTT~~~~~~~~i~~~l 176 (280)
T TIGR00216 101 KVHNAVKKYAKEGYHVILIGKKNH---PEVIGTRGYAPDKAIVVETLEDLENFKV-EDLLGVVSQTTLSQEDTKEIVAEL 176 (280)
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCC---CeeeeeccCcCCCEEEECCHHHHHhCCC-CCcEEEEEcCCCcHHHHHHHHHHH
Confidence 455577888999999999998732 2334444432110 0111222333321 1223333 333333333333322
Q ss_pred CCCCCCCccccchhhccc---CHHHHHHHhhcc---eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCc-CcHHHHHhCC-
Q psy16789 275 GLDTIHGKVLSGDQIDQM---TEHQLQQVVNSV---TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGV-NDGVALKKAD- 346 (608)
Q Consensus 275 gi~~~~~~vi~g~~~~~~---~~~~~~~~~~~~---~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~- 346 (608)
.-..+...+..-+++-.. -+++..++..++ .|.+.-......++.+.+++.|..+..+.+.. -|...|+.++
T Consensus 177 ~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~miVVGg~nSsNT~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~ 256 (280)
T TIGR00216 177 KARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLMIVIGGKNSSNTTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKV 256 (280)
T ss_pred HHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEEEECCCCCchHHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCE
Confidence 111100000001111111 122333333332 34555555667788899998887777776653 3566777654
Q ss_pred eeEEeC
Q psy16789 347 IGIAMG 352 (608)
Q Consensus 347 vgia~~ 352 (608)
|||.-|
T Consensus 257 VGiTAG 262 (280)
T TIGR00216 257 VGITAG 262 (280)
T ss_pred EEEEec
Confidence 677765
No 234
>PTZ00445 p36-lilke protein; Provisional
Probab=46.66 E-value=1.2e+02 Score=28.98 Aligned_cols=133 Identities=18% Similarity=0.137 Sum_probs=75.2
Q ss_pred hhHHHhhccCceEEEEEccCCCCceEEE--EeeecCC----------CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHH
Q psy16789 203 EYPKFQTLGKGLVAMARGSNLQDLCYMG--LVGICDP----------PRPHVRECMSTLLQSGVKVKLVTGDGQETATAI 270 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~~e~~l~~~G--~~~~~d~----------~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~i 270 (608)
.++.+.+.|.+++++-.. .++++ .=|-.++ ++|+.++-+++|+++||+|.++|=-+..+ +
T Consensus 34 ~v~~L~~~GIk~Va~D~D-----nTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~---~ 105 (219)
T PTZ00445 34 FVDLLNECGIKVIASDFD-----LTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKEL---I 105 (219)
T ss_pred HHHHHHHcCCeEEEecch-----hhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhh---c
Confidence 456677889999887554 22222 1112233 69999999999999999999999665544 1
Q ss_pred HHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEE------------------eCchhHHH-HHHHHHHC---CCE
Q psy16789 271 ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYR------------------VTPRHKLT-IVKAFQAN---GVI 328 (608)
Q Consensus 271 a~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r------------------~~p~~K~~-~v~~l~~~---g~~ 328 (608)
.. ......|+|+++-....+.-..-..-..++|- ..|+.|.. +-+.+++. ...
T Consensus 106 ~~-----~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE 180 (219)
T PTZ00445 106 PS-----ENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDE 180 (219)
T ss_pred cc-----cCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHH
Confidence 00 12344566666532211100000000112321 12333332 12333333 356
Q ss_pred EEEEcCCcCcHHHHHhCCee
Q psy16789 329 VGMTGDGVNDGVALKKADIG 348 (608)
Q Consensus 329 v~~~GDg~ND~~al~~A~vg 348 (608)
++++=|....+.+.++.|+-
T Consensus 181 ~LFIDD~~~NVeaA~~lGi~ 200 (219)
T PTZ00445 181 ILFIDDDMNNCKNALKEGYI 200 (219)
T ss_pred eEeecCCHHHHHHHHHCCCE
Confidence 99999999999999887753
No 235
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=44.65 E-value=34 Score=30.95 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=37.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
.+||++.+.++++++. +++.+.|......|..+.+.++...
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 4789999999999955 9999999999999999999998874
No 236
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=44.54 E-value=81 Score=27.02 Aligned_cols=107 Identities=13% Similarity=0.067 Sum_probs=56.2
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHh-hcceEEEEeC--chhHHH
Q psy16789 241 HVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV-NSVTVFYRVT--PRHKLT 317 (608)
Q Consensus 241 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~-~~~~v~~r~~--p~~K~~ 317 (608)
+..++++.+++++.-.+.-+|.....|...+..+.........+...+... ......- ..+.++...+ +.+-.+
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~iS~~g~~~~~~~ 78 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQL---MSAANLTPGDVVIAISFSGETKETVE 78 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCCceEEecCHHHHH---HHHHcCCCCCEEEEEeCCCCCHHHHH
Confidence 456788888888765566677777777777776644332222221111100 0000011 1222333322 334456
Q ss_pred HHHHHHHCCCEEEE-EcCCcCcHHHHHhCCeeEEeC
Q psy16789 318 IVKAFQANGVIVGM-TGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 318 ~v~~l~~~g~~v~~-~GDg~ND~~al~~A~vgia~~ 352 (608)
+++.++++|..+.. +++.. .+.-+.+|+.+-..
T Consensus 79 ~~~~a~~~g~~iv~iT~~~~--~~l~~~~d~~i~~~ 112 (139)
T cd05013 79 AAEIAKERGAKVIAITDSAN--SPLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHcCCeEEEEcCCCC--ChhHHhcCEEEEcC
Confidence 77888888877666 44433 33445677777664
No 237
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=40.65 E-value=2e+02 Score=28.87 Aligned_cols=148 Identities=18% Similarity=0.125 Sum_probs=71.9
Q ss_pred hhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCC--hhHHHHHHHHHhCCCeEEEE--cCCcHHHHHHHHHHc
Q psy16789 199 QSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPR--PHVRECMSTLLQSGVKVKLV--TGDGQETATAIASMV 274 (608)
Q Consensus 199 ~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r--~~~~~~I~~l~~~Gi~v~~~--TGd~~~ta~~ia~~~ 274 (608)
+.+..+.+++++|+.++.++.+.. -...|+.+..+..- =+.++-++.+.-. -++.++ |--+......+...+
T Consensus 104 k~~~~v~~~~~~Gy~iviiG~~~H---pEv~gi~g~~~~~~~vv~~~~d~~~l~~~-~kv~~vsQTT~~~~~~~~iv~~l 179 (281)
T PRK12360 104 KIQNIVEEYYNKGYSIIIVGDKNH---PEVIGINGWCDNSAYIVNSIEEVENIPFL-DKACVVAQTTIIPELWEDILNVI 179 (281)
T ss_pred HHHHHHHHHHhCCCEEEEEcCCCC---ceeeEeccCcCCCeEEECCHHHHhhCccc-cCEEEEECCCCcHHHHHHHHHHH
Confidence 445577888999999999987732 23455555432110 1112222332211 223333 444444444444433
Q ss_pred CCCCCCCccccchhhcccC---HHHHHHHhhcc---eEEEEeCchhHHHHHHHHHHCCCEEEEEcCC-cCcHHHHHhC-C
Q psy16789 275 GLDTIHGKVLSGDQIDQMT---EHQLQQVVNSV---TVFYRVTPRHKLTIVKAFQANGVIVGMTGDG-VNDGVALKKA-D 346 (608)
Q Consensus 275 gi~~~~~~vi~g~~~~~~~---~~~~~~~~~~~---~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg-~ND~~al~~A-~ 346 (608)
.-..+. +...+++-... +++..++..++ .|.+.-......++.+.+++.+..+..+.+. --|...++.+ .
T Consensus 180 ~~~~~~--~~v~~TIC~aT~~RQ~a~~~La~~vD~miVVGg~~SsNT~rL~eia~~~~~~t~~Ie~~~el~~~~~~~~~~ 257 (281)
T PRK12360 180 KLKSKE--LVFFNTICSATKKRQESAKELSKEVDVMIVIGGKHSSNTQKLVKICEKNCPNTFHIETADELDLEMLKDYKI 257 (281)
T ss_pred HHhCcc--cccCCCcchhhhhHHHHHHHHHHhCCEEEEecCCCCccHHHHHHHHHHHCCCEEEECChHHCCHHHhCCCCE
Confidence 211111 11112221111 22233333332 3444555556678888888887667666554 2356667654 3
Q ss_pred eeEEeC
Q psy16789 347 IGIAMG 352 (608)
Q Consensus 347 vgia~~ 352 (608)
|||.-|
T Consensus 258 VGitaG 263 (281)
T PRK12360 258 IGITAG 263 (281)
T ss_pred EEEEcc
Confidence 788766
No 238
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=40.55 E-value=53 Score=28.20 Aligned_cols=55 Identities=15% Similarity=0.180 Sum_probs=38.2
Q ss_pred CCceEEEEeeecCCCChhHHHHHHHHHhCCC-eE-EEEcCCcHHHHHHHHHHcCCCC
Q psy16789 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGV-KV-KLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 224 ~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi-~v-~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
.+-.++++-.......+.+++.++.|+++|. ++ +++-|..+..-.+-.++.|++.
T Consensus 49 ~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~ 105 (122)
T cd02071 49 EDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAE 105 (122)
T ss_pred cCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCE
Confidence 3445566666667778889999999999976 33 5566665554456667888754
No 239
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=39.67 E-value=2e+02 Score=29.09 Aligned_cols=152 Identities=14% Similarity=0.106 Sum_probs=74.0
Q ss_pred hhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCC--ChhHHHHHHHHHh-CCCeEEEE--cCCcHHHHHHHHH
Q psy16789 198 SQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPP--RPHVRECMSTLLQ-SGVKVKLV--TGDGQETATAIAS 272 (608)
Q Consensus 198 ~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~--r~~~~~~I~~l~~-~Gi~v~~~--TGd~~~ta~~ia~ 272 (608)
.+.+..+.++.++|+.++.++.+.. -...|+.+.-+.. =-+.++-++.+.. ..-++.++ |--+......+..
T Consensus 100 ~k~~~~v~~~~~~Gy~vvi~G~~~H---pEv~gi~g~~~~~~~vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~ 176 (298)
T PRK01045 100 TKVHKEVARMSREGYEIILIGHKGH---PEVEGTMGQAPGGVYLVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIA 176 (298)
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCC---CeeeeeccCcCCCEEEEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHH
Confidence 3455677888999999999998732 2344555443210 0122333444421 11234333 4444443334433
Q ss_pred HcCCCCCCCccccchhhcccC---HHHHHHHhhcc---eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCc-CcHHHHHhC
Q psy16789 273 MVGLDTIHGKVLSGDQIDQMT---EHQLQQVVNSV---TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGV-NDGVALKKA 345 (608)
Q Consensus 273 ~~gi~~~~~~vi~g~~~~~~~---~~~~~~~~~~~---~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~-ND~~al~~A 345 (608)
.+.-..+.-.+...+++-... +++..++..++ .|.+.-......++.+.+++.+..+..+.+-. -|...++..
T Consensus 177 ~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~miVVGg~~SsNT~kL~~i~~~~~~~t~~Ie~~~el~~~~l~~~ 256 (298)
T PRK01045 177 ALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLVIVVGSKNSSNSNRLREVAEEAGAPAYLIDDASEIDPEWFKGV 256 (298)
T ss_pred HHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEEEEECCCCCccHHHHHHHHHHHCCCEEEECChHHCcHHHhcCC
Confidence 322111111111112221111 22333333333 34555555566788888888887777776543 255566644
Q ss_pred -CeeEEeC
Q psy16789 346 -DIGIAMG 352 (608)
Q Consensus 346 -~vgia~~ 352 (608)
.|||.-|
T Consensus 257 ~~VGitaG 264 (298)
T PRK01045 257 KTVGVTAG 264 (298)
T ss_pred CEEEEEec
Confidence 3788766
No 240
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=39.17 E-value=62 Score=27.52 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=27.8
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVG 275 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g 275 (608)
-.+++.++++.+++.|++++.+|++.. ....+.+-|
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~ 90 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHG 90 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcC
Confidence 457899999999999999999998774 333455444
No 241
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=37.99 E-value=79 Score=24.93 Aligned_cols=46 Identities=13% Similarity=0.238 Sum_probs=37.3
Q ss_pred eeecCCCChhHHHHHHHHHhCCCeEEE-EcCCcHHHHHHHHHHcCCC
Q psy16789 232 VGICDPPRPHVRECMSTLLQSGVKVKL-VTGDGQETATAIASMVGLD 277 (608)
Q Consensus 232 ~~~~d~~r~~~~~~I~~l~~~Gi~v~~-~TGd~~~ta~~ia~~~gi~ 277 (608)
+...+...+...+..+.|+++|+++.+ ..+++.......|...|..
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 445566778889999999999999988 5677777777888888875
No 242
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=37.27 E-value=2.7e+02 Score=25.41 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhH--HH
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHK--LT 317 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K--~~ 317 (608)
++..++++.+.+++.-.++-.|.+...|...+.++.-.......+......... -..+.++...+++.+ .+
T Consensus 18 ~~~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~-------~~Dv~I~iS~sG~t~~~i~ 90 (179)
T TIGR03127 18 EELDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVGETTTPSIK-------KGDLLIAISGSGETESLVT 90 (179)
T ss_pred HHHHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHHhCCCeEEEeCCcccCCCC-------CCCEEEEEeCCCCcHHHHH
Confidence 467778888888875445557778778877777663332221111111000000 012335555555444 37
Q ss_pred HHHHHHHCCCEEEE-EcCCcCcHHHHHhCCeeEEeC
Q psy16789 318 IVKAFQANGVIVGM-TGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 318 ~v~~l~~~g~~v~~-~GDg~ND~~al~~A~vgia~~ 352 (608)
+++..+++|..|.. |+... .|.-+.||+-+.+.
T Consensus 91 ~~~~ak~~g~~ii~IT~~~~--s~la~~ad~~l~~~ 124 (179)
T TIGR03127 91 VAKKAKEIGATVAAITTNPE--STLGKLADVVVEIP 124 (179)
T ss_pred HHHHHHHCCCeEEEEECCCC--CchHHhCCEEEEeC
Confidence 77888888877766 45443 56666788888876
No 243
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=36.98 E-value=1.3e+02 Score=29.75 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=58.5
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH---HcCCCCCCCccccchhhc-cc---CHHHHHHHhhcceEEEEe
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS---MVGLDTIHGKVLSGDQID-QM---TEHQLQQVVNSVTVFYRV 310 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~---~~gi~~~~~~vi~g~~~~-~~---~~~~~~~~~~~~~v~~r~ 310 (608)
.-+++++.|+.+++.|++|+-+|.+.+.......+ ++|++-.... ...+..- .. ....-.-.+.+-.+|+
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~-~~~~~~~~~~~~~~~~~~~~~~~~GIlft-- 158 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSS-FPEDGIISFPVFDSALSRAPSFYDGILFT-- 158 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccc-cccCcceecccccCCCCCCceeecCeEEe--
Confidence 45799999999999999999999998765554443 4677543321 0000000 00 0000000011112332
Q ss_pred CchhHHHHHHHHHH----CCCEEEEEcCCcCcHHHHHh
Q psy16789 311 TPRHKLTIVKAFQA----NGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 311 ~p~~K~~~v~~l~~----~g~~v~~~GDg~ND~~al~~ 344 (608)
...+|..+...+-. ....|.++-|....+..+..
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~ 196 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEK 196 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHH
Confidence 34567766555433 35679999999877665443
No 244
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=36.43 E-value=4.6e+02 Score=26.36 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy16789 568 IAFLTALTSTVFFVSEIKKAIERICER 594 (608)
Q Consensus 568 w~~~~~~~~~~~~~~~l~K~~~r~~~~ 594 (608)
..++++..+..++....++.++++...
T Consensus 127 ~~l~~~~~~~~~~~~~~~~~i~~~~~~ 153 (293)
T PF03419_consen 127 LFLLIGFIIAYLLLKRLWKYIKRRRIK 153 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334444455555566667766665433
No 245
>KOG2882|consensus
Probab=35.21 E-value=61 Score=32.47 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=40.0
Q ss_pred EEEeeecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH---HcCCC
Q psy16789 229 MGLVGICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAIAS---MVGLD 277 (608)
Q Consensus 229 ~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~---~~gi~ 277 (608)
=|++-..+.+-|+++++++.|++.|-+++.+|..+-.+-+..++ ++|+.
T Consensus 30 DGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 30 DGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 36777788899999999999999999999999988776666655 35654
No 246
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=35.00 E-value=1.8e+02 Score=25.53 Aligned_cols=71 Identities=13% Similarity=0.132 Sum_probs=46.7
Q ss_pred HhhccCceEEEEEcc---------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCC-eE-EEEcCCc------HHHHHH
Q psy16789 207 FQTLGKGLVAMARGS---------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGV-KV-KLVTGDG------QETATA 269 (608)
Q Consensus 207 ~~~~g~r~l~~a~~~---------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi-~v-~~~TGd~------~~ta~~ 269 (608)
+...|++|+.++..- .+.+-.++|+-.+.-.-.+..++.++.|++.|. .+ +++-|.- +.....
T Consensus 27 lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~~ 106 (137)
T PRK02261 27 LTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVEK 106 (137)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHHH
Confidence 456788887777652 245567777777777888888999999999855 22 4444443 344445
Q ss_pred HHHHcCCC
Q psy16789 270 IASMVGLD 277 (608)
Q Consensus 270 ia~~~gi~ 277 (608)
-++++|..
T Consensus 107 ~l~~~G~~ 114 (137)
T PRK02261 107 KFKEMGFD 114 (137)
T ss_pred HHHHcCCC
Confidence 66777754
No 247
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=34.21 E-value=73 Score=27.89 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=46.2
Q ss_pred HhhccCceEEEEEc---------cCCCCceEEEEeeecCCCChhHHHHHHHHHhCCC-eE-EEEcCCcHHHHHHHHHHcC
Q psy16789 207 FQTLGKGLVAMARG---------SNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGV-KV-KLVTGDGQETATAIASMVG 275 (608)
Q Consensus 207 ~~~~g~r~l~~a~~---------~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi-~v-~~~TGd~~~ta~~ia~~~g 275 (608)
+...|+.|+-.... ..+.+-..+|+-++...-.+.+++.++.|+++|. ++ +++-|-.+..-..-.+++|
T Consensus 26 l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~G 105 (132)
T TIGR00640 26 YADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMG 105 (132)
T ss_pred HHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCC
Confidence 34556665554432 1235566777777777778889999999999886 34 4444444444455577788
Q ss_pred CCC
Q psy16789 276 LDT 278 (608)
Q Consensus 276 i~~ 278 (608)
++.
T Consensus 106 vd~ 108 (132)
T TIGR00640 106 VAE 108 (132)
T ss_pred CCE
Confidence 864
No 248
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=33.76 E-value=1.9e+02 Score=29.66 Aligned_cols=84 Identities=18% Similarity=0.410 Sum_probs=62.3
Q ss_pred EeeecCCCChhHHHHHHHHHhC-CCeEEEEcCCc--HHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEE
Q psy16789 231 LVGICDPPRPHVRECMSTLLQS-GVKVKLVTGDG--QETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVF 307 (608)
Q Consensus 231 ~~~~~d~~r~~~~~~I~~l~~~-Gi~v~~~TGd~--~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 307 (608)
++++.|+-|-+...++.++.++ |+.+.+--.+= .+..+.+++.+|++.- ...++-.+.
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl-------------------~~anEG~lv 279 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPL-------------------ELANEGKLV 279 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHH-------------------HhhcCceEE
Confidence 5679999999999999999876 56555443332 5677899999999863 233444577
Q ss_pred EEeCchhHHHHHHHHHHCC-CEEEEEc
Q psy16789 308 YRVTPRHKLTIVKAFQANG-VIVGMTG 333 (608)
Q Consensus 308 ~r~~p~~K~~~v~~l~~~g-~~v~~~G 333 (608)
+-+.|++-.++++.+++.+ .....+|
T Consensus 280 ~~V~~~~a~~~l~~L~~~~~~~A~iIG 306 (339)
T COG0309 280 IAVPPEHAEEVLEALRSHGLKDAAIIG 306 (339)
T ss_pred EEECHHHHHHHHHHHHhcCCccceeEE
Confidence 7888888889999999988 4444455
No 249
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=32.83 E-value=1.5e+02 Score=29.82 Aligned_cols=47 Identities=17% Similarity=0.116 Sum_probs=30.9
Q ss_pred EEEEeCchhHHHHHHHHHHCCCEEEEEcCCc-CcHHHHHhC-CeeEEeC
Q psy16789 306 VFYRVTPRHKLTIVKAFQANGVIVGMTGDGV-NDGVALKKA-DIGIAMG 352 (608)
Q Consensus 306 v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~-ND~~al~~A-~vgia~~ 352 (608)
|.+.-......++.+.+++.+..+..+.+-. =|...++.+ .|||.-|
T Consensus 215 VIGg~~SsNT~kL~eia~~~~~~t~~Ie~~~el~~~~l~~~~~VGItaG 263 (281)
T PF02401_consen 215 VIGGKNSSNTRKLAEIAKEHGKPTYHIETADELDPEWLKGVKKVGITAG 263 (281)
T ss_dssp EES-TT-HHHHHHHHHHHHCTTCEEEESSGGG--HHHHTT-SEEEEEE-
T ss_pred EecCCCCccHHHHHHHHHHhCCCEEEeCCccccCHhHhCCCCEEEEEcc
Confidence 5555556777889999999988888887653 244567777 4888876
No 250
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=32.48 E-value=98 Score=26.98 Aligned_cols=72 Identities=15% Similarity=0.117 Sum_probs=47.4
Q ss_pred HhhccCceEEEEEcc---------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCC-eEE-EEcCCc------HHHHHH
Q psy16789 207 FQTLGKGLVAMARGS---------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGV-KVK-LVTGDG------QETATA 269 (608)
Q Consensus 207 ~~~~g~r~l~~a~~~---------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi-~v~-~~TGd~------~~ta~~ 269 (608)
+...|+.|+-++.+. .+.+-.++|+-++.-.--+..+++++.|+++|+ .+. ++-|-. ......
T Consensus 23 L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~ 102 (128)
T cd02072 23 FTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEK 102 (128)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHH
Confidence 345677777666541 245667788888777777889999999999998 553 444431 123345
Q ss_pred HHHHcCCCC
Q psy16789 270 IASMVGLDT 278 (608)
Q Consensus 270 ia~~~gi~~ 278 (608)
-.+++|...
T Consensus 103 ~L~~~Gv~~ 111 (128)
T cd02072 103 RFKEMGFDR 111 (128)
T ss_pred HHHHcCCCE
Confidence 577778753
No 251
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=31.77 E-value=81 Score=26.68 Aligned_cols=55 Identities=22% Similarity=0.358 Sum_probs=37.1
Q ss_pred CCceEEEEeeecCCCChhHHHHHHHHHhCCC-eE-EEEcCCcHHHHHHHHHHcCCCC
Q psy16789 224 QDLCYMGLVGICDPPRPHVRECMSTLLQSGV-KV-KLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 224 ~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi-~v-~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
.+-.++|+-...+..-+.+++.++.+++.+- .+ +++-|.........++..|.+.
T Consensus 49 ~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~~~G~D~ 105 (119)
T cd02067 49 EDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLKEIGVDA 105 (119)
T ss_pred cCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHHHcCCeE
Confidence 4456677766666666888889999998875 33 5666665444345677777653
No 252
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.51 E-value=5.6e+02 Score=25.91 Aligned_cols=163 Identities=15% Similarity=0.150 Sum_probs=84.8
Q ss_pred hHHHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhH--HHHHHHHHhCCCeEEEE--cCC-cHHHH
Q psy16789 193 GKMILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHV--RECMSTLLQSGVKVKLV--TGD-GQETA 267 (608)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~--~~~I~~l~~~Gi~v~~~--TGd-~~~ta 267 (608)
.+.+.+++.+.++.+...|.+. -++.+...|.+-..+ ....+.+++.||.+... ..+ ..+..
T Consensus 11 A~~i~~~l~~~v~~l~~~g~~P-------------~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el 77 (297)
T PRK14167 11 AAQIRDDLTDAIETLEDAGVTP-------------GLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEEL 77 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCCCc-------------eEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHH
Confidence 3455566666777776666543 134455555554443 56678888889887554 222 22233
Q ss_pred HHHHHHcCCCCCC-Cccc------------------cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH--CC
Q psy16789 268 TAIASMVGLDTIH-GKVL------------------SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA--NG 326 (608)
Q Consensus 268 ~~ia~~~gi~~~~-~~vi------------------~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~--~g 326 (608)
...-++++=+..- +..+ ...+.+.+++..+.++...-.-|.-+||..-.++++..+- .|
T Consensus 78 ~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~G 157 (297)
T PRK14167 78 YDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEG 157 (297)
T ss_pred HHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 3333444333221 1111 1122223333334444333334555677655555555542 48
Q ss_pred CEEEEEcCCcC----cHHHHHh------CCeeEEeCCCCc-HHHHhccCEEEe
Q psy16789 327 VIVGMTGDGVN----DGVALKK------ADIGIAMGKQGT-DVCKEAADMILV 368 (608)
Q Consensus 327 ~~v~~~GDg~N----D~~al~~------A~vgia~~~~~~-~~a~~~ad~v~~ 368 (608)
..|..+|-+.. =+.+|.+ |-|-++...... ...-..||+++.
T Consensus 158 k~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 158 ADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVA 210 (297)
T ss_pred CEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 89999999853 2334543 446666653322 233468898876
No 253
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=31.04 E-value=3.9e+02 Score=26.48 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=23.6
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcCcH---HHHHhCCe-eEEeC
Q psy16789 313 RHKLTIVKAFQANGVIVGMTGDGVNDG---VALKKADI-GIAMG 352 (608)
Q Consensus 313 ~~K~~~v~~l~~~g~~v~~~GDg~ND~---~al~~A~v-gia~~ 352 (608)
++-.+.++.+++....-.++|=|.|+. ..+..++. |+.+|
T Consensus 188 ~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 188 KKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEEC
Confidence 344567777777655556678888844 44444422 55555
No 254
>KOG3128|consensus
Probab=30.84 E-value=1.8e+02 Score=28.51 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=70.6
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCcccc-chhhccc-----CHHHHHHHhhcceEEEEeC
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLS-GDQIDQM-----TEHQLQQVVNSVTVFYRVT 311 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~-g~~~~~~-----~~~~~~~~~~~~~v~~r~~ 311 (608)
+|+++.+..+.|++.+|++.++|.---.....+-++.....++..+++ --+++.. ....+... |.+.+
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Liht------fnkn~ 212 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHT------FNKNS 212 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHH------Hccch
Confidence 478899999999999999999986655555555444433333322221 1122210 01112211 22221
Q ss_pred chhHHHHHHHHHH--CCCEEEEEcCCcCcHHHHHhCC-------eeEEeCCCCc---HHHHhccCEEEecCCcchHHHHH
Q psy16789 312 PRHKLTIVKAFQA--NGVIVGMTGDGVNDGVALKKAD-------IGIAMGKQGT---DVCKEAADMILVDDDFNTIIAAI 379 (608)
Q Consensus 312 p~~K~~~v~~l~~--~g~~v~~~GDg~ND~~al~~A~-------vgia~~~~~~---~~a~~~ad~v~~~~~~~~i~~~i 379 (608)
..-+ ..-+.++. .+..|...||+..|+.|-..+- +|...+ ... ..-++.-|+++..+.-..++..+
T Consensus 213 ~v~~-~~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d-~vee~~~~ymd~ydIvL~~D~tldv~~s~ 290 (298)
T KOG3128|consen 213 SVLQ-NESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLND-SVEEALEKYMDSYDIVLVHDETLDVANSI 290 (298)
T ss_pred HHHH-hhhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccc-hHHHHHHHHHhhcceEEecCcccchhHHH
Confidence 1111 11122332 2567888999999987654321 344433 221 22345678999887766655443
No 255
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=30.82 E-value=56 Score=27.92 Aligned_cols=30 Identities=17% Similarity=0.279 Sum_probs=25.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQETA 267 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta 267 (608)
-.+++.++++.+|++|++++.+|+.+....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 347899999999999999999999765443
No 256
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.61 E-value=5.7e+02 Score=25.69 Aligned_cols=165 Identities=15% Similarity=0.224 Sum_probs=86.6
Q ss_pred hhHHHHhhhhhhhHHHhhc-cCceEEEEEccCCCCceEEEEeeecCCCChhH--HHHHHHHHhCCCeEEEEc--CC-cHH
Q psy16789 192 DGKMILSQSCSEYPKFQTL-GKGLVAMARGSNLQDLCYMGLVGICDPPRPHV--RECMSTLLQSGVKVKLVT--GD-GQE 265 (608)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~-g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~--~~~I~~l~~~Gi~v~~~T--Gd-~~~ 265 (608)
-.+.+.+++.+.++.+..+ |.+. -++.+...|.+-..+ ...++.+++.|+++.... .+ ..+
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P-------------~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~ 76 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVP-------------GLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQE 76 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCc-------------eEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHH
Confidence 3445666677777777555 5443 144555556655443 556888999999876553 22 233
Q ss_pred HHHHHHHHcCCCCCC-Cccc------------------cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH--
Q psy16789 266 TATAIASMVGLDTIH-GKVL------------------SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA-- 324 (608)
Q Consensus 266 ta~~ia~~~gi~~~~-~~vi------------------~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~-- 324 (608)
.....-++++-+..- +..+ ...+.+.+++..+.++...-.-|.-+||..-.++++...-
T Consensus 77 ~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l 156 (284)
T PRK14179 77 ELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVEL 156 (284)
T ss_pred HHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCC
Confidence 344444444333221 1111 1122233333344444433334566677655555554432
Q ss_pred CCCEEEEEcC-CcCc---HHHHHhCCeeEEe--CCCCc-HHHHhccCEEEec
Q psy16789 325 NGVIVGMTGD-GVND---GVALKKADIGIAM--GKQGT-DVCKEAADMILVD 369 (608)
Q Consensus 325 ~g~~v~~~GD-g~ND---~~al~~A~vgia~--~~~~~-~~a~~~ad~v~~~ 369 (608)
.|..++++|- |.-= +.+|.+++.-+.+ ..... ......||+++.-
T Consensus 157 ~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 157 EGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 3889999999 4433 3356666655544 31221 2234678988753
No 257
>PF14163 SieB: Superinfection exclusion protein B
Probab=30.39 E-value=1.1e+02 Score=27.41 Aligned_cols=23 Identities=17% Similarity=0.173 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q psy16789 566 NDIAFLTALTSTVFFVSEIKKAI 588 (608)
Q Consensus 566 ~~w~~~~~~~~~~~~~~~l~K~~ 588 (608)
..|...+.+..+++++..+..++
T Consensus 33 ~~~i~~~fl~s~s~li~~~~~~~ 55 (151)
T PF14163_consen 33 QPWIGLIFLFSVSYLIAQLLSFI 55 (151)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555554555544444444
No 258
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=30.08 E-value=50 Score=28.17 Aligned_cols=27 Identities=11% Similarity=0.059 Sum_probs=23.6
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHH
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQE 265 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 265 (608)
.+++.++++.+++.|.+++.+|+....
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 467999999999999999999998543
No 259
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=29.82 E-value=1.1e+02 Score=30.84 Aligned_cols=38 Identities=24% Similarity=0.287 Sum_probs=28.0
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHcCCC
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETAT-AIASMVGLD 277 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~-~ia~~~gi~ 277 (608)
+++...-+.|++.|.+++++|.+....+. +..+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 56777788899999999999988655443 555555654
No 260
>COG3707 AmiR Response regulator with putative antiterminator output domain [Signal transduction mechanisms]
Probab=29.31 E-value=2.2e+02 Score=26.71 Aligned_cols=71 Identities=15% Similarity=0.087 Sum_probs=53.4
Q ss_pred hHHHhhccCceEEEEEcc---------CCCCceEEEEeeecCCCChhHHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHH
Q psy16789 204 YPKFQTLGKGLVAMARGS---------NLQDLCYMGLVGICDPPRPHVRECMSTLLQ-SGVKVKLVTGDGQETATAIASM 273 (608)
Q Consensus 204 ~~~~~~~g~r~l~~a~~~---------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~ 273 (608)
.+.+...|+.+++.+... ...|+++ +.+++|-++ ..+....+.+ .+-.++++|+.+.......+..
T Consensus 22 ~~~l~eag~~~Vg~~~~~~~~~~~~~~~~pDvVi---ldie~p~rd-~~e~~~~~~~~~~~piv~lt~~s~p~~i~~a~~ 97 (194)
T COG3707 22 REGLLEAGYQRVGEAADGLEAVEVCERLQPDVVI---LDIEMPRRD-IIEALLLASENVARPIVALTAYSDPALIEAAIE 97 (194)
T ss_pred HHHHHHcCCeEeeeecccccchhHHHhcCCCEEE---EecCCCCcc-HHHHHHHhhcCCCCCEEEEEccCChHHHHHHHH
Confidence 355677899999988762 2355554 678899998 5555554444 6788999999999999999999
Q ss_pred cCCCC
Q psy16789 274 VGLDT 278 (608)
Q Consensus 274 ~gi~~ 278 (608)
.|...
T Consensus 98 ~Gv~a 102 (194)
T COG3707 98 AGVMA 102 (194)
T ss_pred cCCeE
Confidence 99864
No 261
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=28.97 E-value=3.4e+02 Score=24.37 Aligned_cols=39 Identities=18% Similarity=0.325 Sum_probs=30.8
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
+...+.=++|++.|++..+..|+....-..+++++|+..
T Consensus 53 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~ 91 (165)
T PF00875_consen 53 ESLADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGATA 91 (165)
T ss_dssp HHHHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTESE
T ss_pred HHHHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcCe
Confidence 344455567788899999999999999989999999754
No 262
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=28.65 E-value=5.2e+02 Score=24.65 Aligned_cols=118 Identities=14% Similarity=0.170 Sum_probs=65.6
Q ss_pred ecCCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHcC----CCCCCCccccchhhccc--------------
Q psy16789 234 ICDPPRPHVRECMSTLLQSGVKVKLVTGDGQETAT---AIASMVG----LDTIHGKVLSGDQIDQM-------------- 292 (608)
Q Consensus 234 ~~d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~~g----i~~~~~~vi~g~~~~~~-------------- 292 (608)
+.....++..+..+.|.+.|++++=+|=+++.... .+.++.+ +.-.-+.|++.++.+..
T Consensus 19 ir~~~~~~a~~~~~al~~~Gi~~iEit~~~~~a~~~i~~l~~~~~~~p~~~vGaGTV~~~~~~~~a~~aGA~FivsP~~~ 98 (213)
T PRK06552 19 VRGESKEEALKISLAVIKGGIKAIEVTYTNPFASEVIKELVELYKDDPEVLIGAGTVLDAVTARLAILAGAQFIVSPSFN 98 (213)
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEECCCccHHHHHHHHHHHcCCCCCeEEeeeeCCCHHHHHHHHHcCCCEEECCCCC
Confidence 34456688899999999999999988877655433 4444442 21112333433333211
Q ss_pred -------------------CHHHHHHHhhc-ceEEEEeCchh--HHHHHHHHHHC--CCEEEEEcC-CcCcHHHHHhCC-
Q psy16789 293 -------------------TEHQLQQVVNS-VTVFYRVTPRH--KLTIVKAFQAN--GVIVGMTGD-GVNDGVALKKAD- 346 (608)
Q Consensus 293 -------------------~~~~~~~~~~~-~~v~~r~~p~~--K~~~v~~l~~~--g~~v~~~GD-g~ND~~al~~A~- 346 (608)
+++++...... ..+.. ..|.+ ....++.++.. +..++.+|- +..+++..-+++
T Consensus 99 ~~v~~~~~~~~i~~iPG~~T~~E~~~A~~~Gad~vk-lFPa~~~G~~~ik~l~~~~p~ip~~atGGI~~~N~~~~l~aGa 177 (213)
T PRK06552 99 RETAKICNLYQIPYLPGCMTVTEIVTALEAGSEIVK-LFPGSTLGPSFIKAIKGPLPQVNVMVTGGVNLDNVKDWFAAGA 177 (213)
T ss_pred HHHHHHHHHcCCCEECCcCCHHHHHHHHHcCCCEEE-ECCcccCCHHHHHHHhhhCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 22333333321 11111 23322 24556666654 355666663 456788888888
Q ss_pred eeEEeC
Q psy16789 347 IGIAMG 352 (608)
Q Consensus 347 vgia~~ 352 (608)
.+++++
T Consensus 178 ~~vavg 183 (213)
T PRK06552 178 DAVGIG 183 (213)
T ss_pred cEEEEc
Confidence 788887
No 263
>PLN02645 phosphoglycolate phosphatase
Probab=28.63 E-value=92 Score=31.70 Aligned_cols=28 Identities=18% Similarity=0.211 Sum_probs=22.0
Q ss_pred HHHHHCCCEEEEEcCCc-CcHHHHHhCCe
Q psy16789 320 KAFQANGVIVGMTGDGV-NDGVALKKADI 347 (608)
Q Consensus 320 ~~l~~~g~~v~~~GDg~-ND~~al~~A~v 347 (608)
+.+.-....++|+||.. +|+.+-+.||+
T Consensus 241 ~~~~~~~~~~~~VGD~~~~Di~~A~~aG~ 269 (311)
T PLN02645 241 NKFGIEKSQICMVGDRLDTDILFGQNGGC 269 (311)
T ss_pred HHcCCCcccEEEEcCCcHHHHHHHHHcCC
Confidence 33333456799999997 99999999994
No 264
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=28.53 E-value=3.8e+02 Score=24.77 Aligned_cols=35 Identities=9% Similarity=0.022 Sum_probs=23.7
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCC
Q psy16789 241 HVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL 276 (608)
Q Consensus 241 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi 276 (608)
=+.+.++.+.+.|.++.++ |..+..+...++.+.-
T Consensus 36 l~~~l~~~~~~~~~~vfll-G~~~~v~~~~~~~l~~ 70 (177)
T TIGR00696 36 LMEELCQRAGKEKLPIFLY-GGKPDVLQQLKVKLIK 70 (177)
T ss_pred HHHHHHHHHHHcCCeEEEE-CCCHHHHHHHHHHHHH
Confidence 3456777788889999888 5556665555555533
No 265
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=28.26 E-value=86 Score=24.85 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=26.8
Q ss_pred EeeecCCC-ChhHHHHHHHHHhCCCeEEEEcCCcH
Q psy16789 231 LVGICDPP-RPHVRECMSTLLQSGVKVKLVTGDGQ 264 (608)
Q Consensus 231 ~~~~~d~~-r~~~~~~I~~l~~~Gi~v~~~TGd~~ 264 (608)
.++++-+- ++...+.++.|+++|+++...|.+..
T Consensus 43 ~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~~~ 77 (85)
T cd04906 43 FVGVSVANGAEELAELLEDLKSAGYEVVDLSDDEL 77 (85)
T ss_pred EEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCCHH
Confidence 45566666 78899999999999999987666543
No 266
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=28.15 E-value=49 Score=29.97 Aligned_cols=23 Identities=35% Similarity=0.541 Sum_probs=20.4
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcC
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTG 261 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TG 261 (608)
.++++++|+++++.|.+++++|.
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 35799999999999999999984
No 267
>PRK14719 bifunctional RNAse/5-amino-6-(5-phosphoribosylamino)uracil reductase; Provisional
Probab=27.84 E-value=1.2e+02 Score=31.75 Aligned_cols=99 Identities=12% Similarity=0.140 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHhCCC--eEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH-
Q psy16789 240 PHVRECMSTLLQSGV--KVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL- 316 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi--~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~- 316 (608)
+...+.|++|++..- .++++=|.+...+ .+++|+... -..+++..+.+..+.-+..-+.++.+.++..|..+.
T Consensus 8 ~~~~~~~~~l~~~~~~~~~ilveg~~d~~~---l~~lgi~g~-~i~~s~~p~~~cad~ii~~gi~rVVi~~D~d~~G~~~ 83 (360)
T PRK14719 8 EKLLLIIDDLKLLAEKGIPILVEGPNDILS---LKNLKINAN-FITVSNTPVFQIADDLIAENISEVILLTDFDRAGRVY 83 (360)
T ss_pred HHHHHHHHHHHHhhhCCCEEEEEcchHHHH---HHHcCCCCc-EEEEeCCchHHHHHHHHHcCCCEEEEEECCCCCCCcc
Confidence 345677888885543 4667788877655 467788643 234555555554444344444555555545554343
Q ss_pred --HHHHHHHHCCCEEEEEcCCcCcHHHHHh
Q psy16789 317 --TIVKAFQANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 317 --~~v~~l~~~g~~v~~~GDg~ND~~al~~ 344 (608)
+.++.|+++|..| .|.-.+.+..+.+
T Consensus 84 ~~~~~~~L~~aGi~V--~~~l~~e~~~l~~ 111 (360)
T PRK14719 84 AKNIMEEFQSRGIKV--NNLIRKEIIKYSR 111 (360)
T ss_pred chHHHHHHHHCCCEE--EeehHHHHHHHhH
Confidence 5599999999988 5665566666643
No 268
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=27.81 E-value=1.6e+02 Score=28.23 Aligned_cols=25 Identities=12% Similarity=0.057 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHH----HHHHHHHHHHhhh
Q psy16789 569 AFLTALTSTVFF----VSEIKKAIERICE 593 (608)
Q Consensus 569 ~~~~~~~~~~~~----~~~l~K~~~r~~~ 593 (608)
+|.+++++.+++ +..++.|++.++.
T Consensus 201 lwyi~Y~vPY~~~ig~~i~l~~~~~~~~~ 229 (230)
T PF03904_consen 201 LWYIAYLVPYIFAIGLFIYLYEWIRAKFH 229 (230)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 444444444433 5556777776653
No 269
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=27.36 E-value=1.1e+02 Score=26.84 Aligned_cols=32 Identities=28% Similarity=0.365 Sum_probs=29.5
Q ss_pred EEEeeecCCCChhHHHHHHHHHhCCCeEEEEc
Q psy16789 229 MGLVGICDPPRPHVRECMSTLLQSGVKVKLVT 260 (608)
Q Consensus 229 ~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~T 260 (608)
+.++|++|++....-...+.|+++|++|+-+-
T Consensus 19 IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVN 50 (140)
T COG1832 19 IAVVGASDKPDRPSYRVAKYLQQKGYRVIPVN 50 (140)
T ss_pred EEEEecCCCCCccHHHHHHHHHHCCCEEEeeC
Confidence 77899999999999999999999999999774
No 270
>COG1436 NtpG Archaeal/vacuolar-type H+-ATPase subunit F [Energy production and conversion]
Probab=27.23 E-value=1.6e+02 Score=24.64 Aligned_cols=58 Identities=16% Similarity=0.242 Sum_probs=41.9
Q ss_pred ceEEEEEccCCCCceEEEEeeec--CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHH
Q psy16789 213 GLVAMARGSNLQDLCYMGLVGIC--DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI 270 (608)
Q Consensus 213 r~l~~a~~~~e~~l~~~G~~~~~--d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~i 270 (608)
++..++.++.-.++.++|+-.+. |+..+..+++++.+.+.++.++++|-+-.+.-...
T Consensus 4 ~I~VIGd~dtvtGFrLaGv~~~~v~~~~~~~~~~~~~~l~~~~~~iIiite~~a~~i~~~ 63 (104)
T COG1436 4 KIAVIGDRDTVTGFRLAGVRVVYVADDEEDELRAALRVLAEDDVGIILITEDLAEKIREE 63 (104)
T ss_pred EEEEEEccchhhceeeecceeEEEecChhHHHHHHHHhhccCCceEEEEeHHHHhhhHHH
Confidence 44455666666677788876664 44444789999999999999999998765554433
No 271
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=26.43 E-value=55 Score=30.54 Aligned_cols=28 Identities=25% Similarity=0.489 Sum_probs=22.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCcH
Q psy16789 237 PPRPHVRECMSTLLQSGVKVKLVTGDGQ 264 (608)
Q Consensus 237 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~ 264 (608)
++-+++.+++++|++.|..++++|++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 4568999999999999988888887753
No 272
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=26.40 E-value=54 Score=32.03 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCC----------cHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEE
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGD----------GQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVF 307 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd----------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 307 (608)
+++-+++.|+.++++||.+. +|. ....-...++++|+..-. +-+ -+
T Consensus 52 ~~~~l~eki~l~~~~gV~v~--~GGtl~E~a~~q~~~~~yl~~~k~lGf~~IE--iSd--------------------Gt 107 (244)
T PF02679_consen 52 PEEILKEKIDLAHSHGVYVY--PGGTLFEVAYQQGKFDEYLEECKELGFDAIE--ISD--------------------GT 107 (244)
T ss_dssp TCHHHHHHHHHHHCTT-EEE--E-HHHHHHHHHTT-HHHHHHHHHHCT-SEEE--E----------------------SS
T ss_pred CHHHHHHHHHHHHHcCCeEe--CCcHHHHHHHhcChHHHHHHHHHHcCCCEEE--ecC--------------------Cc
Confidence 34568999999999999975 554 333444556666664210 000 11
Q ss_pred EEeCchhHHHHHHHHHHCCCEEEE-EcCCcCcHHHHHhCCeeEEeCCCCcHHHHhccCEEEecCCcch
Q psy16789 308 YRVTPRHKLTIVKAFQANGVIVGM-TGDGVNDGVALKKADIGIAMGKQGTDVCKEAADMILVDDDFNT 374 (608)
Q Consensus 308 ~r~~p~~K~~~v~~l~~~g~~v~~-~GDg~ND~~al~~A~vgia~~~~~~~~a~~~ad~v~~~~~~~~ 374 (608)
-.+++++|.++|+..++.|-.|.. +| .-|...-..-++.--+. ........-||+|+.+.+.++
T Consensus 108 i~l~~~~r~~~I~~~~~~Gf~v~~EvG--~K~~~~~~~~~~~~~i~-~~~~dLeAGA~~ViiEarEsG 172 (244)
T PF02679_consen 108 IDLPEEERLRLIRKAKEEGFKVLSEVG--KKDPESDFSLDPEELIE-QAKRDLEAGADKVIIEARESG 172 (244)
T ss_dssp S---HHHHHHHHHHHCCTTSEEEEEES---SSHHHHTT--CCHHHH-HHHHHHHHTECEEEE--TTT-
T ss_pred eeCCHHHHHHHHHHHHHCCCEEeeccc--CCCchhcccCCHHHHHH-HHHHHHHCCCCEEEEeeeccC
Confidence 245678899999999999999888 99 22332222211111111 223334456888887665444
No 273
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=26.12 E-value=60 Score=27.68 Aligned_cols=29 Identities=14% Similarity=0.072 Sum_probs=24.9
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCcHHH
Q psy16789 238 PRPHVRECMSTLLQSGVKVKLVTGDGQET 266 (608)
Q Consensus 238 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~t 266 (608)
-.+++.++++.+++.|.+++.+|+.....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSP 87 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCc
Confidence 35799999999999999999999876544
No 274
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=26.06 E-value=1.5e+02 Score=23.65 Aligned_cols=49 Identities=14% Similarity=0.199 Sum_probs=37.7
Q ss_pred EEeeecC---CCChhHHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHcCCCC
Q psy16789 230 GLVGICD---PPRPHVRECMSTLLQSGVKVKLV-TGDGQETATAIASMVGLDT 278 (608)
Q Consensus 230 G~~~~~d---~~r~~~~~~I~~l~~~Gi~v~~~-TGd~~~ta~~ia~~~gi~~ 278 (608)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+.-
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p~ 55 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIPF 55 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTESE
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCeE
Confidence 3455666 56677888999999999998887 5666777778888888753
No 275
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=26.00 E-value=3.8e+02 Score=22.11 Aligned_cols=101 Identities=16% Similarity=0.199 Sum_probs=57.1
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHH-hhcceEEEEe--CchhHH
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQV-VNSVTVFYRV--TPRHKL 316 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~-~~~~~v~~r~--~p~~K~ 316 (608)
+-..+.++.|++.+++++++.-|....- -++.-|. .++.|+..+. +.+.+. +.+...+--+ .++...
T Consensus 8 ~~~~~i~~~L~~~~~~vvvid~d~~~~~--~~~~~~~-----~~i~gd~~~~---~~l~~a~i~~a~~vv~~~~~d~~n~ 77 (116)
T PF02254_consen 8 RIGREIAEQLKEGGIDVVVIDRDPERVE--ELREEGV-----EVIYGDATDP---EVLERAGIEKADAVVILTDDDEENL 77 (116)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHH--HHHHTTS-----EEEES-TTSH---HHHHHTTGGCESEEEEESSSHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEECCcHHHH--HHHhccc-----ccccccchhh---hHHhhcCccccCEEEEccCCHHHHH
Confidence 3457788999998889999988876532 2333342 2455544332 222221 2233322223 333444
Q ss_pred HHHHHHHHC--CCEEEEEcCCcCcHHHHHhCCeeEE
Q psy16789 317 TIVKAFQAN--GVIVGMTGDGVNDGVALKKADIGIA 350 (608)
Q Consensus 317 ~~v~~l~~~--g~~v~~~GDg~ND~~al~~A~vgia 350 (608)
.+...+++. ...+.+.-+..+....++.+|+-..
T Consensus 78 ~~~~~~r~~~~~~~ii~~~~~~~~~~~l~~~g~d~v 113 (116)
T PF02254_consen 78 LIALLARELNPDIRIIARVNDPENAELLRQAGADHV 113 (116)
T ss_dssp HHHHHHHHHTTTSEEEEEESSHHHHHHHHHTT-SEE
T ss_pred HHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCcCEE
Confidence 566667663 3577777777788888888776544
No 276
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=25.91 E-value=1.1e+02 Score=26.81 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=31.4
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHc
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMV 274 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~ 274 (608)
.-.+.++..|.+.|.+-+.+++|+.+.+..+++++
T Consensus 22 g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 22 GAARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 35678899999999998888999999999999998
No 277
>PF02547 Queuosine_synth: Queuosine biosynthesis protein; InterPro: IPR003699 This entry represents the queuosine biosynthesis proteins QueA. Queuosine is a hypermodified nucleoside that usually occurs in the first position of the anticodon of tRNAs specifying the amino acids asparagine, aspartate, histidine, and tyrosine. The hypermodified nucleoside is found in bacteria and eukaryotes []. Queuosine is synthesized de novo exclusively in bacteria; for eukaryotes the compound is a nutrient factor. Queuosine biosynthesis protein, or S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (QueA) catalyses the formation of the 2,3-epoxy-4,5-dihydroxycyclopentane ring of the Q precursor epoxyqueuosine (oQ). S-adenosyl-L-methionine (AdoMet) reacts with 7-aminomethyl-7-deazaguanine of tRNA at position 34 to yield adenine, methionine, and a modified tRNA with oQ at position 34. QueA consists of two domains: domain 1 has 3 layers alpha/beta/alpha, while domain 2 is a closed beta-barrel with Greek-key topology [].; GO: 0016740 transferase activity, 0016853 isomerase activity, 0008616 queuosine biosynthetic process; PDB: 1WDI_A 1VKY_B 1YY3_A.
Probab=25.77 E-value=1.9e+02 Score=29.76 Aligned_cols=78 Identities=22% Similarity=0.310 Sum_probs=39.7
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHH
Q psy16789 242 VRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKA 321 (608)
Q Consensus 242 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~ 321 (608)
+.+.+++|+++|+++.-+|=. +|+ .++.....+++.+...+.. ...+ |++-.+.|+.
T Consensus 186 t~~ll~~l~~kGv~~a~vTLH-----------VG~----------GTF~pV~~e~i~~H~mh~E-~~~I-~~~ta~~i~~ 242 (341)
T PF02547_consen 186 TEELLERLKAKGVEIAFVTLH-----------VGL----------GTFRPVRVEDIEEHKMHSE-YYEI-PEETAEAINK 242 (341)
T ss_dssp -HHHHHHHHHHTEEEEEEEEE-----------ECG----------GGG---------------E-EEEE--HHHHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEEEEE-----------ecc----------CcccccCcCcccCCCCcce-EEEE-CHHHHHHHHH
Confidence 678999999999999888611 111 1121111111111111100 1112 5667788899
Q ss_pred HHHCCCEEEEEcCCcCcHHHHHh
Q psy16789 322 FQANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 322 l~~~g~~v~~~GDg~ND~~al~~ 344 (608)
.++.|.+|.++|-. -+.+|..
T Consensus 243 ak~~G~RViAVGTT--~vRaLEs 263 (341)
T PF02547_consen 243 AKAEGGRVIAVGTT--VVRALES 263 (341)
T ss_dssp HHHTT--EEEESHH--HHHHHHH
T ss_pred HHHhCCcEEEEccH--HHHHHhh
Confidence 99999999999854 3555554
No 278
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=25.71 E-value=7.2e+02 Score=25.27 Aligned_cols=105 Identities=22% Similarity=0.328 Sum_probs=66.6
Q ss_pred EEEeeecCCCChhH-HHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEE
Q psy16789 229 MGLVGICDPPRPHV-RECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVF 307 (608)
Q Consensus 229 ~G~~~~~d~~r~~~-~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 307 (608)
+|++|.---=|... .+.+..+++.|.||-++.=|+... ..+--+-|+.+. ......+-.+|
T Consensus 54 iGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp------------~TGGsiLGDRiR------M~~~~~~~~vF 115 (323)
T COG1703 54 IGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSP------------FTGGSILGDRIR------MQRLAVDPGVF 115 (323)
T ss_pred EEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCC------------CCCccccccHhh------HHhhccCCCeE
Confidence 56666544444433 455788899999998885443210 001111122211 11122244688
Q ss_pred EEeCch---------hHHHHHHHHHHCCCEEEE---EcCCcCcHHHHHhCCeeEEe
Q psy16789 308 YRVTPR---------HKLTIVKAFQANGVIVGM---TGDGVNDGVALKKADIGIAM 351 (608)
Q Consensus 308 ~r~~p~---------~K~~~v~~l~~~g~~v~~---~GDg~ND~~al~~A~vgia~ 351 (608)
-|..|. ...++++.|...|+.+.. +|=|-+|+.-.+.||..+.+
T Consensus 116 iRs~~srG~lGGlS~at~~~i~~ldAaG~DvIIVETVGvGQsev~I~~~aDt~~~v 171 (323)
T COG1703 116 IRSSPSRGTLGGLSRATREAIKLLDAAGYDVIIVETVGVGQSEVDIANMADTFLVV 171 (323)
T ss_pred EeecCCCccchhhhHHHHHHHHHHHhcCCCEEEEEecCCCcchhHHhhhcceEEEE
Confidence 888876 345889999999986655 69999999999999988876
No 279
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=25.65 E-value=2.1e+02 Score=27.87 Aligned_cols=72 Identities=18% Similarity=0.280 Sum_probs=46.4
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHH----------HHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEE
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETA----------TAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFY 308 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta----------~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~ 308 (608)
++-+++.|+.++++||.+. ||...... ...++++|+..-. ++ .-+-
T Consensus 40 ~~~l~eki~la~~~~V~v~--~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~IE---iS-------------------~G~~ 95 (237)
T TIGR03849 40 RDIVKEKIEMYKDYGIKVY--PGGTLFEIAHSKGKFDEYLNECDELGFEAVE---IS-------------------DGSM 95 (237)
T ss_pred HHHHHHHHHHHHHcCCeEe--CCccHHHHHHHhhhHHHHHHHHHHcCCCEEE---Ec-------------------CCcc
Confidence 3468899999999999875 88633222 2244555553210 00 0123
Q ss_pred EeCchhHHHHHHHHHHCCCEEEE-EcC
Q psy16789 309 RVTPRHKLTIVKAFQANGVIVGM-TGD 334 (608)
Q Consensus 309 r~~p~~K~~~v~~l~~~g~~v~~-~GD 334 (608)
.+++++|.+.|+..++.|-.|.. +|=
T Consensus 96 ~i~~~~~~rlI~~~~~~g~~v~~EvG~ 122 (237)
T TIGR03849 96 EISLEERCNLIERAKDNGFMVLSEVGK 122 (237)
T ss_pred CCCHHHHHHHHHHHHhCCCeEeccccc
Confidence 46678889999999999888876 664
No 280
>TIGR02854 spore_II_GA sigma-E processing peptidase SpoIIGA. Members of this protein family are the stage II sporulation protein SpoIIGA. This protein acts as an activating protease for Sigma-E, one of several specialized sigma factors of the sporulation process in Bacillus subtilis and related endospore-forming bacteria.
Probab=25.49 E-value=7e+02 Score=25.05 Aligned_cols=14 Identities=21% Similarity=0.114 Sum_probs=9.6
Q ss_pred HHHHHHHHhhhhHh
Q psy16789 424 ILWINIIMDGPPAQ 437 (608)
Q Consensus 424 ~l~~~~~~~~~~~~ 437 (608)
++..|+++|.+...
T Consensus 8 ~~l~Nf~~d~~LL~ 21 (288)
T TIGR02854 8 VFLENFIIDYFLLY 21 (288)
T ss_pred HHHHHHHHHHHHHH
Confidence 45678888886543
No 281
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=25.10 E-value=1.6e+02 Score=24.37 Aligned_cols=18 Identities=11% Similarity=-0.132 Sum_probs=8.1
Q ss_pred ccchHHHHHHHHHHHHHH
Q psy16789 529 FTNKMFLFAVCASVVGQL 546 (608)
Q Consensus 529 ~~N~~~~~~~~~~i~~~~ 546 (608)
+++..++..+..+++..+
T Consensus 39 ~~~l~~~g~IG~~~v~pi 56 (100)
T TIGR02230 39 WEGLGMFGLIGWSVAIPT 56 (100)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444433
No 282
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.98 E-value=1.4e+02 Score=23.06 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=34.2
Q ss_pred eeecCCCChhHHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHcCCC
Q psy16789 232 VGICDPPRPHVRECMSTLLQSGVKVKLV-TGDGQETATAIASMVGLD 277 (608)
Q Consensus 232 ~~~~d~~r~~~~~~I~~l~~~Gi~v~~~-TGd~~~ta~~ia~~~gi~ 277 (608)
+...+..++.+.+..+.|+++|+++.+. .+++.......|...|+.
T Consensus 7 ~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 7 VPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 3455556677888889999999998774 445777777788877763
No 283
>PRK01424 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional
Probab=24.93 E-value=1.5e+02 Score=30.48 Aligned_cols=72 Identities=15% Similarity=0.251 Sum_probs=41.7
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHH
Q psy16789 242 VRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKA 321 (608)
Q Consensus 242 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~ 321 (608)
+++.+++|+++|+++.-+|= .+|+... .-+.-+++++- ..+ .=.+.+ |++..+.|+.
T Consensus 208 T~~ll~~L~~kGv~~a~vTL-----------HVG~GTF--~PV~~e~i~~H--------~MH-~E~~~I-~~eta~~In~ 264 (366)
T PRK01424 208 TKDILDKLKAKGIQTAFLTL-----------HVGAGTF--LPVKTENIHEH--------KMH-TEYCSI-TPETAEIINK 264 (366)
T ss_pred CHHHHHHHHHCCCeEEEEEE-----------eecCCCC--cCccccccccC--------Ccc-ceEEEE-CHHHHHHHHH
Confidence 67899999999999988861 1222111 01111111100 000 012223 5566788888
Q ss_pred HHHCCCEEEEEcCCc
Q psy16789 322 FQANGVIVGMTGDGV 336 (608)
Q Consensus 322 l~~~g~~v~~~GDg~ 336 (608)
.++.|.+|.++|-..
T Consensus 265 ak~~G~RIiAVGTT~ 279 (366)
T PRK01424 265 AKQEGRRIIAVGTTT 279 (366)
T ss_pred HHHcCCeEEEEecce
Confidence 899999999999753
No 284
>KOG1250|consensus
Probab=24.81 E-value=2.4e+02 Score=29.59 Aligned_cols=73 Identities=18% Similarity=0.244 Sum_probs=52.2
Q ss_pred hhHHHHHHHHHhCC--CeEEEEcCCcHHHHHHH-HHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHH
Q psy16789 240 PHVRECMSTLLQSG--VKVKLVTGDGQETATAI-ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKL 316 (608)
Q Consensus 240 ~~~~~~I~~l~~~G--i~v~~~TGd~~~ta~~i-a~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 316 (608)
.++..++.++.+.+ -.|+-.|+-|...|.++ |+++|+... .|.--.+|..|
T Consensus 99 RGa~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~LgipaT-------------------------IVmP~~tp~~k- 152 (457)
T KOG1250|consen 99 RGAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPAT-------------------------IVMPVATPLMK- 152 (457)
T ss_pred hhHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCceE-------------------------EEecCCChHHH-
Confidence 36778888888776 35778888887777766 788999752 13444566655
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHH
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGV 340 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~ 340 (608)
++.+++.|..|...|+..--+.
T Consensus 153 --iq~~~nlGA~Vil~G~~~deAk 174 (457)
T KOG1250|consen 153 --IQRCRNLGATVILSGEDWDEAK 174 (457)
T ss_pred --HHHHhccCCEEEEecccHHHHH
Confidence 7788888999999998765443
No 285
>COG0809 QueA S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) [Translation, ribosomal structure and biogenesis]
Probab=24.73 E-value=1e+02 Score=31.40 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=21.3
Q ss_pred chhHHHHHHHHHHCCCEEEEEcCCc
Q psy16789 312 PRHKLTIVKAFQANGVIVGMTGDGV 336 (608)
Q Consensus 312 p~~K~~~v~~l~~~g~~v~~~GDg~ 336 (608)
|++..++++..+++|.+|.++|-..
T Consensus 235 ~~eta~~i~~~k~~GgRIiaVGTTs 259 (348)
T COG0809 235 PQETADAINAAKARGGRIIAVGTTS 259 (348)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcchh
Confidence 6677889999999999999999653
No 286
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=24.68 E-value=7.5e+02 Score=25.10 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
.++...+..+ +..+++-+...++....|+..+++-
T Consensus 90 ~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VPV 124 (310)
T COG0078 90 KDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVPV 124 (310)
T ss_pred HHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCce
Confidence 3444555554 5568888999999999999998863
No 287
>TIGR00129 fdhD_narQ formate dehydrogenase family accessory protein FdhD. FdhD in E. coli and NarQ in B. subtilis are required for the activity of formate dehydrogenase. The gene name in B. subtilis reflects the requirement of the neighboring gene narA for nitrate assimilation, for which NarQ is not required. In some species, the gene is associated not with a known formate dehydrogenase but with a related putative molybdopterin-binding oxidoreductase. A reasonable hypothesis is that this protein helps prepare a required cofactor for assembly into the holoenzyme.
Probab=24.11 E-value=1.2e+02 Score=29.59 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=32.3
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 242 VRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 242 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
..+.+.++..+||++++-.+-+...|..+|++.||.
T Consensus 181 s~emv~Ka~~aGIpvlvS~sapT~lavelA~~~giT 216 (237)
T TIGR00129 181 SSEMVQKAARCGVPIIASKSAPTDLAIEVAEESNIT 216 (237)
T ss_pred cHHHHHHHHHcCCCEEEEcccchHHHHHHHHHhCCE
Confidence 457889999999999999999999999999999984
No 288
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=23.91 E-value=1.2e+02 Score=29.55 Aligned_cols=39 Identities=13% Similarity=0.226 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
+...+.|++|+++|+.|+-++-|.-.+-....+++|+..
T Consensus 196 ~~l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 196 DILKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 445788999999999999999999999999999999965
No 289
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=23.73 E-value=5e+02 Score=23.65 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=23.8
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCC
Q psy16789 241 HVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGL 276 (608)
Q Consensus 241 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi 276 (608)
=.++.++.+.+.|.++.++ |..++.+...++.+.-
T Consensus 34 l~~~ll~~~~~~~~~v~ll-G~~~~~~~~~~~~l~~ 68 (171)
T cd06533 34 LMPALLELAAQKGLRVFLL-GAKPEVLEKAAERLRA 68 (171)
T ss_pred HHHHHHHHHHHcCCeEEEE-CCCHHHHHHHHHHHHH
Confidence 3467788888889999988 5566655555544433
No 290
>PRK15108 biotin synthase; Provisional
Probab=23.69 E-value=7.2e+02 Score=25.70 Aligned_cols=85 Identities=16% Similarity=0.280 Sum_probs=51.4
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHH
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIV 319 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v 319 (608)
+.+.+.++.+++.|+.+.+--|.-......--++.|++..+- .++. +++ ... .+++.-+.++..+.+
T Consensus 111 e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~------~leT-~p~----~f~--~I~~~~~~~~rl~~i 177 (345)
T PRK15108 111 PYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNH------NLDT-SPE----FYG--NIITTRTYQERLDTL 177 (345)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEee------cccc-ChH----hcC--CCCCCCCHHHHHHHH
Confidence 677889999999999876555554455555566778864221 0111 111 111 123334667788888
Q ss_pred HHHHHCCCEEE---EEcCCcC
Q psy16789 320 KAFQANGVIVG---MTGDGVN 337 (608)
Q Consensus 320 ~~l~~~g~~v~---~~GDg~N 337 (608)
+..++.|..+. ++|-|..
T Consensus 178 ~~a~~~G~~v~sg~i~GlgEt 198 (345)
T PRK15108 178 EKVRDAGIKVCSGGIVGLGET 198 (345)
T ss_pred HHHHHcCCceeeEEEEeCCCC
Confidence 99988887654 4666654
No 291
>PF13541 ChlI: Subunit ChlI of Mg-chelatase
Probab=23.53 E-value=3e+02 Score=23.70 Aligned_cols=41 Identities=20% Similarity=0.278 Sum_probs=34.0
Q ss_pred cCCCCceEEEEeeecCCCC--hhHHHHHHHHHhCCCeEEEEcC
Q psy16789 221 SNLQDLCYMGLVGICDPPR--PHVRECMSTLLQSGVKVKLVTG 261 (608)
Q Consensus 221 ~~e~~l~~~G~~~~~d~~r--~~~~~~I~~l~~~Gi~v~~~TG 261 (608)
+...+..|+|=+++.-++| +++...+..+++.|++-+++.-
T Consensus 77 ~~~~~~~~~GEl~L~G~ir~v~~~~~~~~~A~~~G~~~vivP~ 119 (121)
T PF13541_consen 77 PIPEDTVFIGELGLDGEIRPVPGILPRIIEAKKLGFKRVIVPK 119 (121)
T ss_pred ccCCCEEEEEEecCCccEEecCcHHHHHHHHHHCCCCEEEeCC
Confidence 3457889999999999988 5778889999999998777643
No 292
>PRK08309 short chain dehydrogenase; Provisional
Probab=23.25 E-value=5.9e+02 Score=23.38 Aligned_cols=92 Identities=9% Similarity=0.104 Sum_probs=56.5
Q ss_pred HHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhh-------cc-eEEEEeCchh
Q psy16789 243 RECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVN-------SV-TVFYRVTPRH 314 (608)
Q Consensus 243 ~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~-------~~-~v~~r~~p~~ 314 (608)
.+..+.|.+.|.+|.+++ ++...+..+...++-. .. +..-..+-.+++++.+.+. .. .++.++..+-
T Consensus 13 g~la~~L~~~G~~V~v~~-R~~~~~~~l~~~l~~~-~~---i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~~~ 87 (177)
T PRK08309 13 KRVSLWLCEKGFHVSVIA-RREVKLENVKRESTTP-ES---ITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHSSA 87 (177)
T ss_pred HHHHHHHHHCcCEEEEEE-CCHHHHHHHHHHhhcC-Cc---EEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEeccccc
Confidence 357888999999998875 5555566655544321 11 1111122223333333322 22 4678888888
Q ss_pred HHHHHHHHHHCC------CEEEEEcCCcCcH
Q psy16789 315 KLTIVKAFQANG------VIVGMTGDGVNDG 339 (608)
Q Consensus 315 K~~~v~~l~~~g------~~v~~~GDg~ND~ 339 (608)
...+.+.+++.| ..+-|.|...+|.
T Consensus 88 ~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~ 118 (177)
T PRK08309 88 KDALSVVCRELDGSSETYRLFHVLGSAASDP 118 (177)
T ss_pred hhhHHHHHHHHccCCCCceEEEEeCCcCCch
Confidence 888999998876 3578899999865
No 293
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=23.23 E-value=8.7e+02 Score=27.36 Aligned_cols=17 Identities=24% Similarity=0.421 Sum_probs=8.9
Q ss_pred cceeeeCCccc-hHHHHH
Q psy16789 521 KSVFTIGLFTN-KMFLFA 537 (608)
Q Consensus 521 ~~~f~~~~~~N-~~~~~~ 537 (608)
.+++-..++++ +.+...
T Consensus 298 ~Pl~P~~Lf~~~r~~~~~ 315 (599)
T PF06609_consen 298 DPLFPHRLFKDRRGFAAL 315 (599)
T ss_pred CCcCCHHHhccchHHHHH
Confidence 45555556665 444443
No 294
>PF10852 DUF2651: Protein of unknown function (DUF2651) ; InterPro: IPR020258 This entry contains transmembrane proteins with no known function.
Probab=23.12 E-value=3.8e+02 Score=21.21 Aligned_cols=31 Identities=19% Similarity=0.096 Sum_probs=24.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy16789 564 TINDIAFLTALTSTVFFVSEIKKAIERICER 594 (608)
Q Consensus 564 ~~~~w~~~~~~~~~~~~~~~l~K~~~r~~~~ 594 (608)
+..++.|+..+.+.++....+-+.+.|++..
T Consensus 49 n~SFf~WvvvYT~~s~i~S~iT~~~ir~yk~ 79 (82)
T PF10852_consen 49 NPSFFFWVVVYTIFSFIVSYITLLFIRKYKA 79 (82)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4667888889999999999998887766543
No 295
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=23.08 E-value=88 Score=29.46 Aligned_cols=70 Identities=16% Similarity=0.204 Sum_probs=48.7
Q ss_pred HhhccCceEEEEEcc---------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCe--E-EEEcCCcHHHHHHHHHHc
Q psy16789 207 FQTLGKGLVAMARGS---------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVK--V-KLVTGDGQETATAIASMV 274 (608)
Q Consensus 207 ~~~~g~r~l~~a~~~---------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~--v-~~~TGd~~~ta~~ia~~~ 274 (608)
+...|++|+.++..- .+.+-.++|+-.....-.+..++.++.++++|.+ + +++-|... + ...++++
T Consensus 108 l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~-~-~~~~~~~ 185 (197)
T TIGR02370 108 LRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPV-T-QDWADKI 185 (197)
T ss_pred HHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhc-C-HHHHHHh
Confidence 345677777666541 1355677888888788888999999999999875 4 45566544 3 4578888
Q ss_pred CCCC
Q psy16789 275 GLDT 278 (608)
Q Consensus 275 gi~~ 278 (608)
|-+.
T Consensus 186 gad~ 189 (197)
T TIGR02370 186 GADV 189 (197)
T ss_pred CCcE
Confidence 7653
No 296
>PRK00724 formate dehydrogenase accessory protein; Reviewed
Probab=22.87 E-value=1.3e+02 Score=29.81 Aligned_cols=36 Identities=17% Similarity=0.267 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCC
Q psy16789 242 VRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLD 277 (608)
Q Consensus 242 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 277 (608)
..+.++++..+||++++--+-+...|..+|++.||.
T Consensus 210 s~emv~Ka~~aGipvivS~saPT~lAVelA~~~giT 245 (263)
T PRK00724 210 SSEMVQKAAMAGIPILVAVSAPTSLAVELAEELGLT 245 (263)
T ss_pred hHHHHHHHHHcCCcEEEEcccchHHHHHHHHHhCCE
Confidence 457889999999999999999999999999999984
No 297
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=22.74 E-value=1.1e+02 Score=22.24 Aligned_cols=24 Identities=29% Similarity=0.459 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCc
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDG 263 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~ 263 (608)
++-++.++.|.++|++|-|.|.+.
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHH
Confidence 567899999999999999887543
No 298
>PLN02389 biotin synthase
Probab=22.68 E-value=6.5e+02 Score=26.48 Aligned_cols=86 Identities=17% Similarity=0.205 Sum_probs=57.0
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHH
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTI 318 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~ 318 (608)
.+.+.+.++.+++.|+.+....|-........-++.|++.... .++. .++ ...+ ++..-+.+++.+.
T Consensus 152 ~e~i~eiir~ik~~~l~i~~s~G~l~~E~l~~LkeAGld~~~~------~LeT-s~~----~y~~--i~~~~s~e~rl~t 218 (379)
T PLN02389 152 FNQILEYVKEIRGMGMEVCCTLGMLEKEQAAQLKEAGLTAYNH------NLDT-SRE----YYPN--VITTRSYDDRLET 218 (379)
T ss_pred HHHHHHHHHHHhcCCcEEEECCCCCCHHHHHHHHHcCCCEEEe------eecC-ChH----HhCC--cCCCCCHHHHHHH
Confidence 5788899999998899987777776666666777888875321 1111 111 1121 2234478889999
Q ss_pred HHHHHHCCCEEEE---EcCCcC
Q psy16789 319 VKAFQANGVIVGM---TGDGVN 337 (608)
Q Consensus 319 v~~l~~~g~~v~~---~GDg~N 337 (608)
++..++.|..|.. +|-|..
T Consensus 219 i~~a~~~Gi~v~sg~IiGlgEt 240 (379)
T PLN02389 219 LEAVREAGISVCSGGIIGLGEA 240 (379)
T ss_pred HHHHHHcCCeEeEEEEECCCCC
Confidence 9999999876633 565543
No 299
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=22.24 E-value=2e+02 Score=28.72 Aligned_cols=55 Identities=20% Similarity=0.306 Sum_probs=41.8
Q ss_pred CCCceEEEEeeec---CCCChhHHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHcCCC
Q psy16789 223 LQDLCYMGLVGIC---DPPRPHVRECMSTLLQSGVKVKLV-TGDGQETATAIASMVGLD 277 (608)
Q Consensus 223 e~~l~~~G~~~~~---d~~r~~~~~~I~~l~~~Gi~v~~~-TGd~~~ta~~ia~~~gi~ 277 (608)
.-+|..+|+++.. +|-..+..+.++.+++.|++++.. ++-+..++..++++.|..
T Consensus 187 ~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~ 245 (282)
T cd01017 187 RYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAK 245 (282)
T ss_pred HCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCc
Confidence 3567777776652 334466788899999999998877 566778899999999874
No 300
>KOG1504|consensus
Probab=21.89 E-value=1.7e+02 Score=28.58 Aligned_cols=37 Identities=35% Similarity=0.546 Sum_probs=26.3
Q ss_pred HHHHHHHHH--CCCEEEEEcCCcCc--HHHHHhCCeeEEeC
Q psy16789 316 LTIVKAFQA--NGVIVGMTGDGVND--GVALKKADIGIAMG 352 (608)
Q Consensus 316 ~~~v~~l~~--~g~~v~~~GDg~ND--~~al~~A~vgia~~ 352 (608)
..+++.+.+ .|-+|+.+|||-|= .-|+..|-+||...
T Consensus 178 LTi~E~f~ks~~glkvawiGD~NNvlhs~mia~ak~gih~s 218 (346)
T KOG1504|consen 178 LTIIEHFGKSVEGLKVAWIGDGNNVLHSWMIAAAKFGIHFS 218 (346)
T ss_pred HHHHHHHhccccccEEEEEccccHHHHHHHHHhhhcceEEE
Confidence 356666633 47889999999873 34677788887763
No 301
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=21.81 E-value=2.5e+02 Score=29.08 Aligned_cols=62 Identities=26% Similarity=0.341 Sum_probs=43.5
Q ss_pred eEEEEcCCcHHHHHHH-HHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEc
Q psy16789 255 KVKLVTGDGQETATAI-ASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTG 333 (608)
Q Consensus 255 ~v~~~TGd~~~ta~~i-a~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~G 333 (608)
.|+-.|.-|...+.+. |+.+|+..- .+.-..+|.+| ++..+..|-.|...|
T Consensus 76 gViaaSaGNHaQGvA~aa~~lGi~a~-------------------------IvMP~~tp~~K---v~a~r~~GaeVil~g 127 (347)
T COG1171 76 GVIAASAGNHAQGVAYAAKRLGIKAT-------------------------IVMPETTPKIK---VDATRGYGAEVILHG 127 (347)
T ss_pred ceEEecCCcHHHHHHHHHHHhCCCEE-------------------------EEecCCCcHHH---HHHHHhcCCEEEEEC
Confidence 3777776666655555 777888652 14456788888 455566788999999
Q ss_pred CCcCcHHHHHh
Q psy16789 334 DGVNDGVALKK 344 (608)
Q Consensus 334 Dg~ND~~al~~ 344 (608)
|..+|+.....
T Consensus 128 ~~~dda~~~a~ 138 (347)
T COG1171 128 DNFDDAYAAAE 138 (347)
T ss_pred CCHHHHHHHHH
Confidence 99998876553
No 302
>cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. This CD includes the C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. The Escherichia coli tdcB gene product, ThrD-II, anaerobically catalyzes the pyridoxal phosphate-dependent dehydration of L-threonine and L-serine to ammonia and to alpha-ketobutyrate and pyruvate, respectively. Tetrameric ThrD-II is subject to allosteric activation by AMP, inhibition by alpha-keto acids, and catabolite inactivation by several metabolites of glycolysis and the citric acid cycle. Also included in this CD are N-terminal ACT domains present in smaller (~170 a.a.) archaeal proteins of unknown function. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.53 E-value=3.3e+02 Score=19.78 Aligned_cols=55 Identities=11% Similarity=0.134 Sum_probs=35.1
Q ss_pred hhHHHhhccCceEEEEEccCC---CCceEEEEeeecCCCChhHHHHHHHHHhCCCeEE
Q psy16789 203 EYPKFQTLGKGLVAMARGSNL---QDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVK 257 (608)
Q Consensus 203 ~~~~~~~~g~r~l~~a~~~~e---~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~ 257 (608)
..+.++..|..+..+.+.... .+-...-.+.++-+-.+...+.++.+++.|+++.
T Consensus 15 i~~~i~~~~~nI~~i~~~~~~~~~~~~~~~~~i~v~~~~~~~l~~l~~~l~~~g~~~~ 72 (73)
T cd04886 15 LLAVIAEAGANIIEVSHDRAFKTLPLGEVEVELTLETRGAEHIEEIIAALREAGYDVR 72 (73)
T ss_pred HHHHHHHcCCCEEEEEEEeccCCCCCceEEEEEEEEeCCHHHHHHHHHHHHHcCCEEe
Confidence 445556778777766654321 1222333445555556778899999999999874
No 303
>PRK11598 putative metal dependent hydrolase; Provisional
Probab=21.41 E-value=4.2e+02 Score=29.42 Aligned_cols=24 Identities=13% Similarity=0.005 Sum_probs=11.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHH
Q psy16789 563 LTINDIAFLTALTSTVFFVSEIKK 586 (608)
Q Consensus 563 l~~~~w~~~~~~~~~~~~~~~l~K 586 (608)
+++...+++++++++..++...+|
T Consensus 119 ~s~~~~~~~l~~gvlP~~~~~~~~ 142 (545)
T PRK11598 119 MTPQMLLWLGLSGVLPALIACWIK 142 (545)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhh
Confidence 455555555555555544444444
No 304
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=21.40 E-value=4.6e+02 Score=26.12 Aligned_cols=108 Identities=12% Similarity=0.063 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHh--hcceEEEEeCchh--H
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV--NSVTVFYRVTPRH--K 315 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~--~~~~v~~r~~p~~--K 315 (608)
+...++++.+.++....+.-.|.+...|..++..+.-......+........ .. .... ..+.++...+... -
T Consensus 128 ~~l~~~~~~i~~A~~I~i~G~G~S~~~A~~l~~~l~~~g~~~~~~~d~~~~~---~~-~~~~~~~Dl~I~iS~sG~t~~~ 203 (292)
T PRK11337 128 DEFHRAARFFYQARQRDLYGAGGSAAIARDVQHKFLRIGVRCQAYDDAHIML---MS-AALLQEGDVVLVVSHSGRTSDV 203 (292)
T ss_pred HHHHHHHHHHHcCCeEEEEEecHHHHHHHHHHHHHhhCCCeEEEcCCHHHHH---HH-HhcCCCCCEEEEEeCCCCCHHH
Confidence 5667788888888766677788888888887766543221111111110000 00 0111 2233444444433 3
Q ss_pred HHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 316 LTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 316 ~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
.++++..++.|..|.++-|.. +.+.-+.||+-+.+.
T Consensus 204 ~~~~~~ak~~g~~ii~IT~~~-~s~la~~ad~~l~~~ 239 (292)
T PRK11337 204 IEAVELAKKNGAKIICITNSY-HSPIAKLADYVICST 239 (292)
T ss_pred HHHHHHHHHCCCeEEEEeCCC-CChhHHhCCEEEEcC
Confidence 367777788887777755543 345555688777665
No 305
>PRK00147 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional
Probab=21.09 E-value=2e+02 Score=29.75 Aligned_cols=78 Identities=23% Similarity=0.311 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHH
Q psy16789 242 VRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKA 321 (608)
Q Consensus 242 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~ 321 (608)
+.+.+++|+++|+++.-+|= .+|+... .-+..+++++.. .+- =... -|++-.+.|+.
T Consensus 186 t~~ll~~L~~kGv~~a~vTL-----------HVG~GTF--~PV~~edi~~H~--------mH~-E~~~-I~~~ta~~i~~ 242 (342)
T PRK00147 186 TEELLEKLKAKGVEIAFVTL-----------HVGAGTF--RPVRVEDIEEHK--------MHS-EWYE-VPQETADAINA 242 (342)
T ss_pred CHHHHHHHHHCCCcEEEEEE-----------eecCCCC--cCcccCccccCC--------ccc-EEEE-ECHHHHHHHHH
Confidence 57899999999999987761 1222111 011111111100 000 0111 25667788999
Q ss_pred HHHCCCEEEEEcCCcCcHHHHHh
Q psy16789 322 FQANGVIVGMTGDGVNDGVALKK 344 (608)
Q Consensus 322 l~~~g~~v~~~GDg~ND~~al~~ 344 (608)
.++.|.+|.++|-.. +.+|..
T Consensus 243 ak~~G~rIiAVGTT~--vRaLEs 263 (342)
T PRK00147 243 AKARGGRVIAVGTTS--VRTLES 263 (342)
T ss_pred HHHcCCeEEEEcccc--hhhHHH
Confidence 999999999999654 455554
No 306
>PF04056 Ssl1: Ssl1-like; InterPro: IPR007198 Ssl1-like proteins are 40 kDa subunits of the transcription factor II H complex. This domain is often found associated with the C2H2 type Zn-finger (IPR007087 from INTERPRO).; GO: 0008270 zinc ion binding, 0006281 DNA repair, 0006355 regulation of transcription, DNA-dependent
Probab=20.95 E-value=4.6e+02 Score=24.67 Aligned_cols=76 Identities=17% Similarity=0.316 Sum_probs=45.5
Q ss_pred CCCchhH--HHHhhhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEc-CCcH
Q psy16789 188 PSKRDGK--MILSQSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVT-GDGQ 264 (608)
Q Consensus 188 ~~kg~~~--~~~~~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~T-Gd~~ 264 (608)
.++|++. .-++.....+......|.|-+ +.+.|-+..-||- ++-++|+.|++.+|||-+++ +-..
T Consensus 75 ~~~G~~SLqN~Le~A~~~L~~~p~~~srEI----------lvi~gSl~t~Dp~--di~~ti~~l~~~~IrvsvI~laaEv 142 (193)
T PF04056_consen 75 EPSGEPSLQNGLEMARSSLKHMPSHGSREI----------LVIFGSLTTCDPG--DIHETIESLKKENIRVSVISLAAEV 142 (193)
T ss_pred CCCCChhHHHHHHHHHHHHhhCccccceEE----------EEEEeecccCCch--hHHHHHHHHHHcCCEEEEEEEhHHH
Confidence 3445443 334444444444444444433 3446777777754 78899999999999876553 2234
Q ss_pred HHHHHHHHHcC
Q psy16789 265 ETATAIASMVG 275 (608)
Q Consensus 265 ~ta~~ia~~~g 275 (608)
.-.+.++++.|
T Consensus 143 ~I~k~i~~~T~ 153 (193)
T PF04056_consen 143 YICKKICKETG 153 (193)
T ss_pred HHHHHHHHhhC
Confidence 45566777665
No 307
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.62 E-value=2.2e+02 Score=28.53 Aligned_cols=55 Identities=15% Similarity=0.071 Sum_probs=41.1
Q ss_pred CCCceEEEEeeec---CCCChhHHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHcCCC
Q psy16789 223 LQDLCYMGLVGIC---DPPRPHVRECMSTLLQSGVKVKLV-TGDGQETATAIASMVGLD 277 (608)
Q Consensus 223 e~~l~~~G~~~~~---d~~r~~~~~~I~~l~~~Gi~v~~~-TGd~~~ta~~ia~~~gi~ 277 (608)
.-+|..+|.+.+. +|--.+..+.++.+++.|++++.. .+-+...+..+|++.|..
T Consensus 193 ~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 193 AYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred HcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 3567777776653 233356678888999999998866 566778899999999985
No 308
>TIGR00113 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase. This model describes the enzyme for S-adenosylmethionine:tRNA ribosyltransferase-isomerase (QueA). QueA synthesizes Queuosine which is usually in the first position of the anticodon of tRNAs specific for asparagine, aspartate, histidine, and tyrosine.
Probab=20.58 E-value=2.2e+02 Score=29.46 Aligned_cols=72 Identities=24% Similarity=0.372 Sum_probs=41.7
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHH
Q psy16789 242 VRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKA 321 (608)
Q Consensus 242 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~ 321 (608)
+++.+++|+++|+++.-+|= .+|+... .-+.-+++++ ...+- =.+.+ |++..+.|+.
T Consensus 187 t~~ll~~l~~kGv~~a~vTL-----------HVG~GTF--~PV~~e~i~~--------H~mH~-E~~~v-~~~ta~~i~~ 243 (344)
T TIGR00113 187 SEELLEKLKAKGVQYAFITL-----------HVGAGTF--RPVEADNIED--------HVMHA-EYYEV-PQETVEALNK 243 (344)
T ss_pred CHHHHHHHHHCCCeEEEEEE-----------eecCCCC--cCcccccccc--------CCccc-EEEEE-CHHHHHHHHH
Confidence 57899999999999987761 1222111 0011111110 00000 01122 5667788999
Q ss_pred HHHCCCEEEEEcCCc
Q psy16789 322 FQANGVIVGMTGDGV 336 (608)
Q Consensus 322 l~~~g~~v~~~GDg~ 336 (608)
.++.|.+|.++|-..
T Consensus 244 ak~~G~RIiAVGTT~ 258 (344)
T TIGR00113 244 TRENGGRIIAVGTTS 258 (344)
T ss_pred HHHcCCeEEEEccce
Confidence 999999999999654
No 309
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=20.52 E-value=6.5e+02 Score=24.77 Aligned_cols=109 Identities=10% Similarity=-0.003 Sum_probs=62.9
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHHHHh-hcceEEEEeCchhH--H
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQQVV-NSVTVFYRVTPRHK--L 316 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~-~~~~v~~r~~p~~K--~ 316 (608)
++..++++.+++++.-.++-.|.+...|..++.++.......... .+... ....+...- ..+.++...++..+ .
T Consensus 116 ~~l~~~~~~i~~a~~I~i~G~G~s~~~A~~~~~~l~~~g~~~~~~--~d~~~-~~~~~~~~~~~Dv~I~iS~sg~~~~~~ 192 (278)
T PRK11557 116 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGINAVAE--RDMHA-LLATVQALSPDDLLLAISYSGERRELN 192 (278)
T ss_pred HHHHHHHHHHhcCCeEEEEecChhHHHHHHHHHHHhhCCCeEEEc--CChHH-HHHHHHhCCCCCEEEEEcCCCCCHHHH
Confidence 566778888889886666678888888888887765544322111 11100 001111111 22334444455444 4
Q ss_pred HHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeC
Q psy16789 317 TIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMG 352 (608)
Q Consensus 317 ~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~ 352 (608)
++++..+++|..|.++-|.. +.+.-+.||+-+...
T Consensus 193 ~~~~~ak~~ga~iI~IT~~~-~s~la~~ad~~l~~~ 227 (278)
T PRK11557 193 LAADEALRVGAKVLAITGFT-PNALQQRASHCLYTI 227 (278)
T ss_pred HHHHHHHHcCCCEEEEcCCC-CCchHHhCCEEEEeC
Confidence 77788888888887766652 444455677777654
No 310
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=20.49 E-value=63 Score=30.88 Aligned_cols=73 Identities=12% Similarity=0.252 Sum_probs=49.2
Q ss_pred HhhccCceEEEEEcc---------CCCCceEEEEeeecCCCChhHHHHHHHHHhCCCeEEEEcC-CcHHHHHHHHHHcCC
Q psy16789 207 FQTLGKGLVAMARGS---------NLQDLCYMGLVGICDPPRPHVRECMSTLLQSGVKVKLVTG-DGQETATAIASMVGL 276 (608)
Q Consensus 207 ~~~~g~r~l~~a~~~---------~e~~l~~~G~~~~~d~~r~~~~~~I~~l~~~Gi~v~~~TG-d~~~ta~~ia~~~gi 276 (608)
+...|++++-++..- .|.+-.+++..++--.--.+.++.++.|++.|+|--+++| -........+++.|-
T Consensus 128 l~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vGGApvtq~~a~~iGA 207 (227)
T COG5012 128 LEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVGGAPVTQDWADKIGA 207 (227)
T ss_pred HHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeecCccccHHHHHHhCC
Confidence 455688888877662 1344556666665555556789999999999999655554 333345677888887
Q ss_pred CCC
Q psy16789 277 DTI 279 (608)
Q Consensus 277 ~~~ 279 (608)
+..
T Consensus 208 D~~ 210 (227)
T COG5012 208 DAY 210 (227)
T ss_pred Ccc
Confidence 653
No 311
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=20.37 E-value=1.5e+02 Score=28.83 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=32.9
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHcCCCC
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVTGDGQETATAIASMVGLDT 278 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~ 278 (608)
.+...+.+++|+++||+|-++= |+.......|+++|-+.
T Consensus 112 ~~~l~~~i~~L~~~gIrVSLFi-dP~~~qi~~A~~~GAd~ 150 (239)
T PRK05265 112 FDKLKPAIARLKDAGIRVSLFI-DPDPEQIEAAAEVGADR 150 (239)
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCE
Confidence 4677899999999999998877 77778888999999753
No 312
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.33 E-value=6e+02 Score=25.59 Aligned_cols=166 Identities=13% Similarity=0.134 Sum_probs=86.3
Q ss_pred CchhHHHHhhhhhhhHHHhhc-cCceEEEEEccCCCCceEEEEeeecCCCChhH--HHHHHHHHhCCCeEEEEc--CC-c
Q psy16789 190 KRDGKMILSQSCSEYPKFQTL-GKGLVAMARGSNLQDLCYMGLVGICDPPRPHV--RECMSTLLQSGVKVKLVT--GD-G 263 (608)
Q Consensus 190 kg~~~~~~~~~~~~~~~~~~~-g~r~l~~a~~~~e~~l~~~G~~~~~d~~r~~~--~~~I~~l~~~Gi~v~~~T--Gd-~ 263 (608)
|.-.+++.+++.+.++.+..+ |.+. . +..+...|.+-..+ ....+.+++.|+++.... .+ .
T Consensus 14 k~iA~~i~~~l~~~i~~l~~~~g~~P-~------------Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~ 80 (287)
T PRK14176 14 KALAKKIEAEVRSGVERLKSNRGITP-G------------LATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTT 80 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCC-e------------EEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCC
Confidence 333446666777777777655 5432 1 34455555555443 667888999999876543 22 2
Q ss_pred HHHHHHHHHHcCCCCCCCccc-------------------cchhhcccCHHHHHHHhhcceEEEEeCchhHHHHHHHHHH
Q psy16789 264 QETATAIASMVGLDTIHGKVL-------------------SGDQIDQMTEHQLQQVVNSVTVFYRVTPRHKLTIVKAFQA 324 (608)
Q Consensus 264 ~~ta~~ia~~~gi~~~~~~vi-------------------~g~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 324 (608)
.+.....-++++-+..-+-++ ...+.+.+++..+..+...-.-|.-+||..-.++++..+-
T Consensus 81 ~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~PcTp~av~~ll~~~~i 160 (287)
T PRK14176 81 QEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIGDEGLVPCTPHGVIRALEEYGV 160 (287)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcCCCCCCCCcHHHHHHHHHHcCC
Confidence 333444445554333211111 1122222333333344333333555677665555555432
Q ss_pred --CCCEEEEEcCCcC----cHHHHHhC--CeeEEeCCCC-cHHHHhccCEEEe
Q psy16789 325 --NGVIVGMTGDGVN----DGVALKKA--DIGIAMGKQG-TDVCKEAADMILV 368 (608)
Q Consensus 325 --~g~~v~~~GDg~N----D~~al~~A--~vgia~~~~~-~~~a~~~ad~v~~ 368 (608)
.|..|..+|-|.. =+.+|... .|-++-.... -...-..||+++.
T Consensus 161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~ 213 (287)
T PRK14176 161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVV 213 (287)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEE
Confidence 3889999998853 23345444 4555544222 1223357888764
No 313
>PRK00087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed
Probab=20.25 E-value=5.1e+02 Score=29.47 Aligned_cols=148 Identities=16% Similarity=0.113 Sum_probs=72.5
Q ss_pred hhhhhhHHHhhccCceEEEEEccCCCCceEEEEeeecCCCC--hhHHHHHHHHHhCCCeEEEE--cCCcHHHHHHHHHHc
Q psy16789 199 QSCSEYPKFQTLGKGLVAMARGSNLQDLCYMGLVGICDPPR--PHVRECMSTLLQSGVKVKLV--TGDGQETATAIASMV 274 (608)
Q Consensus 199 ~~~~~~~~~~~~g~r~l~~a~~~~e~~l~~~G~~~~~d~~r--~~~~~~I~~l~~~Gi~v~~~--TGd~~~ta~~ia~~~ 274 (608)
+.++.+.+++++|+.++.++.+.. -...|+.+..+..- -+..+-++.+.. .-++.++ |-=+......+...+
T Consensus 101 k~~~~~~~~~~~g~~ivi~G~~~H---pEv~g~~g~~~~~~~vv~~~~~~~~~~~-~~~~~~~~QTT~~~~~~~~~~~~l 176 (647)
T PRK00087 101 NIQKLAKKYYEEGYQIVIVGDKNH---PEVIGINGWCNNSAIIVEDGEEAEKLPF-DKKICVVSQTTEKQENFEKVLKEL 176 (647)
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCC---CeeeeeccccCCCEEEECCHHHHhhCCC-CCCEEEEEcCCCcHHHHHHHHHHH
Confidence 445577888999999999998732 23455555432110 011222222221 1233333 333444333333332
Q ss_pred CCCCCCCccccchhhcccC---HHHHHHHhhcc---eEEEEeCchhHHHHHHHHHHCCCEEEEEcCCc-CcHHHHHhCC-
Q psy16789 275 GLDTIHGKVLSGDQIDQMT---EHQLQQVVNSV---TVFYRVTPRHKLTIVKAFQANGVIVGMTGDGV-NDGVALKKAD- 346 (608)
Q Consensus 275 gi~~~~~~vi~g~~~~~~~---~~~~~~~~~~~---~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~-ND~~al~~A~- 346 (608)
.-..++ +.-.+++.... ++...++..++ .|.+.-......++++.+++.|..+..+-+-. =|...++.++
T Consensus 177 ~~~~~~--~~~~~tiC~at~~Rq~a~~~la~~~d~~~vvGg~~SsNt~~L~~i~~~~~~~~~~ie~~~el~~~~~~~~~~ 254 (647)
T PRK00087 177 KKKGKE--VKVFNTICNATEVRQEAAEKLAKKVDVMIVVGGKNSSNTTKLYEICKSNCTNTIHIENAGELPEEWFKGVKI 254 (647)
T ss_pred HHhCCC--cccCCCcchhhhhHHHHHHHHHhhCCEEEEECCCCCccHHHHHHHHHHHCCCEEEECChHHCCHHHhCCCCE
Confidence 211111 11112222111 22333333333 24445555567788888888887777775542 2455677554
Q ss_pred eeEEeC
Q psy16789 347 IGIAMG 352 (608)
Q Consensus 347 vgia~~ 352 (608)
|||.-|
T Consensus 255 vgitag 260 (647)
T PRK00087 255 IGVTAG 260 (647)
T ss_pred EEEEec
Confidence 777766
No 314
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.21 E-value=99 Score=26.44 Aligned_cols=27 Identities=19% Similarity=0.208 Sum_probs=23.4
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCcHHH
Q psy16789 240 PHVRECMSTLLQSGVKVKLVTGDGQET 266 (608)
Q Consensus 240 ~~~~~~I~~l~~~Gi~v~~~TGd~~~t 266 (608)
+++.+.++.+++.|++++.+|++....
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~ 100 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSP 100 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCCh
Confidence 678899999999999999999986543
No 315
>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=20.20 E-value=2.8e+02 Score=29.37 Aligned_cols=92 Identities=26% Similarity=0.318 Sum_probs=56.4
Q ss_pred CCCceEEEEeeecCCCChhHHHHHHH-HHhCCCe---EEEEcCCcHHHHHHHHHHcCCCCCCCccccchhhcccCHHHHH
Q psy16789 223 LQDLCYMGLVGICDPPRPHVRECMST-LLQSGVK---VKLVTGDGQETATAIASMVGLDTIHGKVLSGDQIDQMTEHQLQ 298 (608)
Q Consensus 223 e~~l~~~G~~~~~d~~r~~~~~~I~~-l~~~Gi~---v~~~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~ 298 (608)
+.|...+|+|+=. -.||+|.|++ |.+.|.+ ++..|.|.....+..|-.
T Consensus 188 ~aDv~ViaLIGER---GREVrEFIE~~Lg~egl~rsViVvATSD~s~l~R~~aa~------------------------- 239 (441)
T COG1157 188 EADVNVIALIGER---GREVREFIEKDLGEEGLKRSVVVVATSDESALMRLKAAF------------------------- 239 (441)
T ss_pred cCCEEEEEEeecc---chhHHHHHHHhcchhhccceEEEEECCCCCHHHHHHHHH-------------------------
Confidence 4556666666533 3577777774 4444553 455577765544443321
Q ss_pred HHhhcceEEEEeCchhHHHHHHHHHHCCCEEEEEcCCcCcHHHHHhCCeeEEeCCCCcHHHH
Q psy16789 299 QVVNSVTVFYRVTPRHKLTIVKAFQANGVIVGMTGDGVNDGVALKKADIGIAMGKQGTDVCK 360 (608)
Q Consensus 299 ~~~~~~~v~~r~~p~~K~~~v~~l~~~g~~v~~~GDg~ND~~al~~A~vgia~~~~~~~~a~ 360 (608)
--..+-+.++.+|+.|+.+=|+..--.+-+ -.||+|.| +.+.+|
T Consensus 240 ---------------~At~IAEyFRDqG~~VLL~mDSlTRfA~Aq-REI~LA~G--EpP~~k 283 (441)
T COG1157 240 ---------------TATTIAEYFRDQGKRVLLIMDSLTRFAMAQ-REIGLAAG--EPPATK 283 (441)
T ss_pred ---------------HHHHHHHHHHhCCCeEEEEeecHHHHHHHH-HHHHHhcC--CCCccC
Confidence 122567899999999999999976544333 56788876 444443
No 316
>COG4420 Predicted membrane protein [Function unknown]
Probab=20.17 E-value=1.8e+02 Score=27.01 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=24.8
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHhhhhHh
Q psy16789 395 FQLSTSIAALSLIALATLLRIPNPLNAMQILWINIIMDGPPAQ 437 (608)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 437 (608)
|.+...+..++.+++........++.|..++|+|++.....++
T Consensus 60 fil~~~~~ll~Wi~lNl~~~~~~~wDpyPFi~LnLllS~~Aai 102 (191)
T COG4420 60 FILTFTLLLLLWIVLNLFLVPGLAWDPYPFILLNLLLSTLAAI 102 (191)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCcCCCccHHHHHHHHHHHHHH
Confidence 3344444444444444444334677888888888887766543
No 317
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=20.17 E-value=1.5e+02 Score=25.06 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=27.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCcHHHHHHH
Q psy16789 236 DPPRPHVRECMSTLLQSGVKVKLVTGDGQETATAI 270 (608)
Q Consensus 236 d~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~i 270 (608)
..-.++..+.++.+++.|.+++.+|+.........
T Consensus 63 sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~ 97 (131)
T PF01380_consen 63 SGETRELIELLRFAKERGAPVILITSNSESPLARL 97 (131)
T ss_dssp SSTTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHH
T ss_pred cccchhhhhhhHHHHhcCCeEEEEeCCCCCchhhh
Confidence 34558899999999999999999997765444333
No 318
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.12 E-value=1.2e+02 Score=23.58 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=20.5
Q ss_pred ChhHHHHHHHHHhCCCeEEEEc
Q psy16789 239 RPHVRECMSTLLQSGVKVKLVT 260 (608)
Q Consensus 239 r~~~~~~I~~l~~~Gi~v~~~T 260 (608)
.+++.++++.+++.|.+++.+|
T Consensus 60 t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 60 TEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CHHHHHHHHHHHHcCCeEEEEe
Confidence 5789999999999999999999
Done!