RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16794
(131 letters)
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 123 bits (312), Expect = 2e-36
Identities = 49/89 (55%), Positives = 65/89 (73%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+I + G+IVNVSS + A+ H++Y ++K ALD +T+ MALELGP+ IRVN+V PTV
Sbjct: 122 LIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV 181
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
VMT MG+ WSDP KA ML + PLG+FA
Sbjct: 182 VMTSMGQATWSDPHKAKTMLNRIPLGKFA 210
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 121 bits (306), Expect = 1e-35
Identities = 41/89 (46%), Positives = 57/89 (64%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI+ + GSIVNVSS+ YS++K A+ +T+ MA+ELGP+ IRVNSV PTV
Sbjct: 122 MINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV 181
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
V+T MG+ +DP A + + PL +FA
Sbjct: 182 VLTDMGKKVSADPEFARKLKERHPLRKFA 210
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 112 bits (283), Expect = 5e-32
Identities = 44/89 (49%), Positives = 57/89 (64%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M+ G+I+ V+S A L H Y SKA L T+ +A ELGP+ IR NSV PTV
Sbjct: 144 MVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTV 203
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
V+T+MG+ W D AK+ PM+A+ PLGRFA
Sbjct: 204 VLTEMGQRVWGDEAKSAPMIARIPLGRFA 232
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 106 bits (267), Expect = 1e-29
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+++ I+G+++N+SS+ K Y+ASK + +T T+ALE P IRVN++ P
Sbjct: 131 FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGA 190
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
+ T + ++DP + + + P+G
Sbjct: 191 INTPINAEKFADPEQRADVESMIPMGYI 218
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 105 bits (264), Expect = 4e-29
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M GS++ VSS+ Y+ SK AL +T+ +A+EL P NIRVN + P +
Sbjct: 138 MEKRG-GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGL 196
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
+ T + W D A+ M + R
Sbjct: 197 IKTNFSQVLWMDKARKEYMKESLRIRRLG 225
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 104 bits (263), Expect = 7e-29
Identities = 25/82 (30%), Positives = 38/82 (46%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
GS V +SSIA Y +K+A+D + + A ELG +RVNS++P ++ T +
Sbjct: 144 GSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVA 203
Query: 68 TGWSDPAKAGPMLAKTPLGRFA 89
+ TPL R
Sbjct: 204 AITESAELSSDYAMCTPLPRQG 225
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 101 bits (255), Expect = 7e-28
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M + G IV++SS+ LE +T SKAAL+++TR +A+EL P I VN+V
Sbjct: 128 MEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGA 186
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
+ T + + TP GR
Sbjct: 187 IDTDALKHFPNREDLLEDARQNTPAGRM 214
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 101 bits (253), Expect = 1e-27
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN++S+A A G + Y+ SK A+ +T+++A++ IR N+V P ++ T M +
Sbjct: 135 GVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194
Query: 68 TGWSDPAKAGPMLAKTPLGRFA 89
P +LA+ P
Sbjct: 195 WRLDQPELRDQVLARIPQKEIG 216
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 100 bits (251), Expect = 3e-27
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+IVN+SS A + T Y+ +KAA++++TR +A + G + +R N++ P +V T
Sbjct: 139 GAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE 198
Query: 68 TGWSDPAKAGPMLAKTPLGRFA 89
G P GR
Sbjct: 199 VGLPQPIVDI-FATHHLAGRIG 219
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 99 bits (250), Expect = 5e-27
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 7 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 65
S+V S AG T ++Y+ASKAAL S R L+L IR+N++ P T
Sbjct: 152 GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGL 211
Query: 66 ----GRTGWSDPAKAGPMLAKTPLGRFA 89
G+ + A+ P+GR
Sbjct: 212 VELAGKDPVQQQGLLNALAAQVPMGRVG 239
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 98.3 bits (246), Expect = 2e-26
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+I+ +SSIAG + +IYSA+K AL+ + R +A E IR N+V P V+ T +
Sbjct: 144 GNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE 203
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+ D K ++++ PLGRF
Sbjct: 204 AVYDDEFKKV-VISRKPLGRF 223
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 97.9 bits (245), Expect = 2e-26
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M + G I+ ++S+A + T Y++SKAA + R MA +LG NIRVN + P
Sbjct: 133 MEKNG-GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGA 191
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA-----ANA 92
++T ++ + + ML TP+ R ANA
Sbjct: 192 ILTDALKSVITPEIEQK-MLQHTPIRRLGQPQDIANA 227
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 98.0 bits (245), Expect = 2e-26
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
GSIVN+SS AG L + Y ASK + +++ A+ELG IRVNSV P + T M
Sbjct: 131 GSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-- 188
Query: 68 TGWSDPAKAGPMLAKTPLGRFAA 90
T + + TP+GR
Sbjct: 189 TAETGIRQGEGNYPNTPMGRVGN 211
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 97.6 bits (244), Expect = 3e-26
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQP 58
M + + SI+N+SSI G Y+ASK A+ ++++ AL+ Y++RVN+V P
Sbjct: 128 MKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP 187
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
+ T + +A KTP+G
Sbjct: 188 GYIKTPLVD-DLPGAEEAMSQRTKTPMGHIG 217
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 97.6 bits (244), Expect = 3e-26
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
I+N+SS A + +L YS +K A++++T T+A +LG I VN++ P V T M
Sbjct: 141 SRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNA 200
Query: 68 TGWSDPAKAGPMLAKTPLGRFA 89
SDP + R
Sbjct: 201 ELLSDPMMKQYATTISAFNRLG 222
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 96.8 bits (242), Expect = 4e-26
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 5 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 64
K+ SIV S A Y+ SK A+ +T+++AL+L Y IRVN+V P V T
Sbjct: 117 KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTD 176
Query: 65 MGRTGWSDPAKAGP---------MLAKTPLGRFA 89
+ R A + PL R A
Sbjct: 177 LYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIA 210
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 97.6 bits (244), Expect = 5e-26
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+IVN+SS+AG+ A+ G Y SKA + ++R A EL IR N++ P V T M +
Sbjct: 155 GAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQ 214
Query: 68 TGWSDPAKAGP-----MLAKTPLGRFA 89
T + A + GR A
Sbjct: 215 TAMAMFDGALGAGGARSMIARLQGRMA 241
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 97.2 bits (243), Expect = 5e-26
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+ + +G++V +SS++G A+ +Y A+K A+D +TR +A E NIRVN V P V
Sbjct: 133 LKASE-RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGV 191
Query: 61 VMTQMGRTGWSDPAKA---GPMLAKTPLGRFA 89
+ T + DP + ++ + L R
Sbjct: 192 IATSLVEMTIQDPEQKENLNKLIDRCALRRMG 223
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 96.8 bits (242), Expect = 7e-26
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+ + G+++ +SSIAG +AL ++YSASK A++ +T+++A E NIRVNSV P V
Sbjct: 145 LKASQ-NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGV 203
Query: 61 VMTQMGRTGWSD----PAKAGPMLAKTPLGRFA 89
++T + T + + KTP+GR
Sbjct: 204 ILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAG 236
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 96.4 bits (241), Expect = 7e-26
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV---MTQ 64
S++ ++S GK L + +Y ++AA ++ + A L I + ++ P
Sbjct: 127 ASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYF 186
Query: 65 MGRTGWSDPAKAGPMLAKTPLGRFA 89
++P + PLGR
Sbjct: 187 PTSDWENNPELRERVDRDVPLGRLG 211
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 96.1 bits (240), Expect = 1e-25
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G++VNV+S+ + + + Y +K+AL ++++T+A ELG IRVNSV P + +
Sbjct: 140 GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLK 199
Query: 68 TGWSDPAKAGP---------MLAKTPLGRFA 89
+ + A A + L R
Sbjct: 200 SYFEHQAGKYGTSVEDIYNAAAAGSDLKRLP 230
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 95.7 bits (239), Expect = 2e-25
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI G I+N++S AG+ IY A+KAA+ S+T++ L+L + I VN++ P V
Sbjct: 128 MIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGV 187
Query: 61 VMTQM---------GRTGWSDPAKAGPMLAKTPLGRFA 89
V + K + P GR
Sbjct: 188 VDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMG 225
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 95.7 bits (239), Expect = 2e-25
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+IVNV+S G GH +Y +KAAL S+T+ M ++ P IR+N+V P V T M R
Sbjct: 146 GAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLR 205
Query: 68 TGWSDPAKAGP-----MLAKTPLGRFA 89
TG++ + PLGR A
Sbjct: 206 TGFAKRGFDPDRAVAELGRTVPLGRIA 232
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 95.7 bits (239), Expect = 2e-25
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+++N+SS+ G Y A+K A+ ++T+ +AL+ PY +RVN + P + T +
Sbjct: 134 GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWE 193
Query: 68 TGWS----DPAKAGPMLAKTPLGRFA 89
+ A + PLGR
Sbjct: 194 ELAALMPDPRASIREGMLAQPLGRMG 219
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 95.7 bits (239), Expect = 2e-25
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 1 MIDHKIQGSIVNVSSIA-GKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 59
+ K G IVN+SSIA G A YS +KAA+D TR A++L + IRVNS+ P
Sbjct: 136 LSSTK--GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPG 193
Query: 60 VVMTQM-GRTGWSDPAKAGP------MLAKTPLGRFA 89
+V T G + M P G
Sbjct: 194 LVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMG 230
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 94.9 bits (237), Expect = 4e-25
Identities = 34/86 (39%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 65
GSIV SS+A + G ++YSASKAAL S +A EL P IRVNSV P + T
Sbjct: 132 GSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKG 191
Query: 66 --GRTGWSDPAKAGPMLAKTPLGRFA 89
G T TP+ R
Sbjct: 192 VAGITEAERAEFKTLGDNITPMKRNG 217
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 94.5 bits (236), Expect = 7e-25
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+I+ GSI+ +SS AG Y+ASK A+ + R A ELG ++IRVNSV P
Sbjct: 147 IIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGP 206
Query: 61 VMTQM---------GRTGWSDPAKAGPMLAKTPLGRFA 89
V T M G+ ++P + +L A
Sbjct: 207 VNTPMGSGDMVTAVGQAMETNPQLS-HVLTPFLPDWVA 243
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 94.2 bits (235), Expect = 9e-25
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N+S+ + IY+A+KA ++++T ++ EL +I VN+V P T +
Sbjct: 155 GRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFL 214
Query: 68 TGWSDPAKAGPMLAKTPLGRFA 89
G SD + PL R
Sbjct: 215 EGKSDEVRDR-FAKLAPLERLG 235
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 93.7 bits (234), Expect = 1e-24
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
Query: 1 MIDHK---IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 57
++ + I+NV+S Y+A+K + S+T+ +A+EL P IRV ++
Sbjct: 130 FKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALN 189
Query: 58 PTVVMTQM--GRTGWSDPAKAGPMLAKTPLGRFA-----ANA 92
P T + G P+GR A A
Sbjct: 190 PVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEA 231
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 93.4 bits (233), Expect = 1e-24
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
G IVN +S+ G A + Y+A+KA + ++TR A+E + +R+N+V P++
Sbjct: 147 FRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSI 206
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
+ S + + GR A
Sbjct: 207 ARHKFLEKTSSSELLDR-LASDEAFGRAA 234
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 93.4 bits (233), Expect = 1e-24
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G +VN +S+ G + + Y+A+K + +TR A+E G Y IR+N++ P + T M
Sbjct: 145 GMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVE 204
Query: 68 TGWSDPAKAGP------MLAKTPLGRFA 89
P + P R+
Sbjct: 205 NSMKQLDPENPRKAAEEFIQVNPSKRYG 232
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 93.8 bits (234), Expect = 2e-24
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 65
GSI+N +S +A+ T Y ASK A+ S+TR MA++ IRVN+V P + +
Sbjct: 153 GSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT 212
Query: 66 --GRTGWSDPAKAGPMLAKTPLGRFA-----ANA 92
A+ + R A A
Sbjct: 213 KIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEA 246
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 93.8 bits (234), Expect = 2e-24
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 8 GSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
GS+ SS G T G Y+ASKA L + + +A+ELG IRVN++ P T
Sbjct: 138 GSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPAN 197
Query: 67 RTGW--SDPAKAGPMLAKTPLGRFA 89
+ P G + L R A
Sbjct: 198 FANLPGAAPETRGFVEGLHALKRIA 222
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 93.0 bits (232), Expect = 2e-24
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
GSI+N+SSI G Y+A+K A+ +T++ ALELGP IRVNS+ P +V T M
Sbjct: 133 GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT- 191
Query: 68 TGWSDPAKAGPMLAKTPLGRFA 89
+ +T LGR A
Sbjct: 192 ------DWVPEDIFQTALGRAA 207
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 92.6 bits (231), Expect = 2e-24
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 1 MIDHKIQGSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
M++ K QG IV + S++G + Y+ASKA + R++A E P+ IR N+V P
Sbjct: 137 MLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAP 195
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
T + T + R G P +A TP+GR
Sbjct: 196 TYIETTLTRFGMEKPELYDAWIAGTPMGRVG 226
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 93.0 bits (232), Expect = 3e-24
Identities = 35/90 (38%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 8 GSIVNVSSI-AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 65
G IVNVSSI AG A Y+ +KAALD TR+ A++L + IRVNSV P +V T
Sbjct: 141 GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT 200
Query: 66 GRTGWSDPAKAGP------MLAKTPLGRFA 89
G D A P+G
Sbjct: 201 NAMGMPDQASQKFYNFMASHKECIPIGAAG 230
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 92.2 bits (230), Expect = 3e-24
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+I+N+SS+AG+ Y +SKAA++ +TR +A ++GP IRVN++ P + T
Sbjct: 140 GAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALA 199
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
T + + ML TPLGR
Sbjct: 200 TVLTPEIERA-MLKHTPLGRL 219
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 92.2 bits (230), Expect = 4e-24
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+IVNV+S+ G A + + Y+ASK L ++TR++AL+L P IRVN+V P + T+
Sbjct: 129 GAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL 188
Query: 68 TGWS---DPAKAGP-MLAKTPLGRFA 89
+ DP + L R
Sbjct: 189 EAIALSPDPERTRRDWEDLHALRRLG 214
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 92.3 bits (230), Expect = 4e-24
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 7 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
IV++S + H Y A+KA L+S+T + A P ++VN + P ++M Q
Sbjct: 149 VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQP- 206
Query: 67 RTGWSDPAKAGPMLAKTPLGRFA 89
D A LAK+ LG
Sbjct: 207 ---KDDAAYRANALAKSALGIEP 226
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 92.7 bits (231), Expect = 4e-24
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 5 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 64
S+VN+ L G +Y+ +K AL +TR ALEL P +IRVN+V P + +
Sbjct: 159 SRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL- 217
Query: 65 MGRTGWSDPAKAGPMLAKTPLGR 87
K PLG+
Sbjct: 218 ---PPAMPQETQEEYRRKVPLGQ 237
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 91.8 bits (229), Expect = 5e-24
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+ ++G I+N +SIA + YS +K A+ +T+ A EL P VN+ P +
Sbjct: 127 FDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGI 186
Query: 61 VMTQM---------GRTGWSDPAKAGPMLAKTPLGRFA 89
V T M G + LGR +
Sbjct: 187 VGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPS 224
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 92.3 bits (230), Expect = 6e-24
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI GSI+ SS+ G A Y A+K + + R +ELG + IRVNSV PT
Sbjct: 151 MIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTH 210
Query: 61 VMTQM--------------GRTGWSDPAKAGPMLAKTPLGR 87
V T M G D A M P+
Sbjct: 211 VKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPW 251
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 91.5 bits (228), Expect = 8e-24
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 15/103 (14%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI G IVN +S+AG Y SK A+ ++T T AL+L PYNIRVN++ P
Sbjct: 131 MITQN-YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGY 189
Query: 61 VMTQMGRTGWSDPAKAGP--------------MLAKTPLGRFA 89
+ + M+ P+ R+
Sbjct: 190 MGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYG 232
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 91.9 bits (229), Expect = 1e-23
Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 5 KIQGSIVNVSSI-AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 63
K +G IVNVSSI AG A G+ Y+ +KAALD TR A++L + +RVNSV P V T
Sbjct: 156 KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVAT 215
Query: 64 QM-GRTGWSDPAKAGP------MLAKTPLGRFA 89
G G + A P+G
Sbjct: 216 GFMGAMGLPETASDKLYSFIGSRKECIPVGHCG 248
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 90.3 bits (225), Expect = 2e-23
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 9/98 (9%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
G I+N S AG +YS+SK A+ +T+T A +L P I VN P +
Sbjct: 125 FKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGI 184
Query: 61 VMTQM---------GRTGWSDPAKAGPMLAKTPLGRFA 89
V T M G + LGR +
Sbjct: 185 VKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS 222
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 90.7 bits (226), Expect = 2e-23
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 8 GSIVNVSSIAGKTALEG-HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
G+IVNVSS+A + Y+ASKAA+D+ T +A E+ IRVN+V+P ++ T +
Sbjct: 160 GAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLH 219
Query: 67 RTGWSDPAKAGPMLAKTPLGRF 88
+G P +A M P+ R
Sbjct: 220 ASG-GLPDRAREMAPSVPMQRA 240
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 90.2 bits (225), Expect = 2e-23
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTVVMTQM 65
GSI+N++S++ +E + YSASKAA+ ++TR AL Y IRVNS+ P + T M
Sbjct: 131 GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM 190
Query: 66 GRTGWSD---PAKAGPMLAKTPLGRFA 89
+ GR
Sbjct: 191 MQASLPKGVSKEMVLHDPKLNRAGRAY 217
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 89.9 bits (224), Expect = 3e-23
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTI--YSASKAALDSITRTMALELGPYNIRVNSVQP 58
M+ G+IVN+ S++G Y ASK A+ +TR +A E +RVN++ P
Sbjct: 131 MVARG-AGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAP 189
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
V T+M P L TP+GR
Sbjct: 190 GYVATEMTLKMRERPELFETWLDMTPMGRCG 220
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 89.5 bits (223), Expect = 4e-23
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN +SIAG Y+ +K L +TR++A G IR +V P V T +G
Sbjct: 137 GVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGL 196
Query: 68 TGW--SDPAKAGPMLAKTPLGRFA 89
S+ + R A
Sbjct: 197 GSSKPSELGMRTLTKLMSLSSRLA 220
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 90.4 bits (225), Expect = 4e-23
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+I + + +++++I +T +++KA ++++++++A E G Y +R N +QP
Sbjct: 150 LIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGP 209
Query: 61 VMTQMGRTGWSDPAKAGP-MLAKTPLGRF 88
+ T+ + M+ + P GR
Sbjct: 210 IKTKGAFSRLDPTGTFEKEMIGRIPCGRL 238
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 89.5 bits (223), Expect = 5e-23
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 65
+IV V+S+ SA++A + ++ R+MA E P +RVN + +V +
Sbjct: 139 AAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWR 198
Query: 66 --------GRTGWSDPAKAGPMLAKTPLGRFA 89
W+ + PLGR
Sbjct: 199 RRFEAREERELDWAQWTAQLARNKQIPLGRLG 230
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 89.1 bits (222), Expect = 6e-23
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+ +G IVN +S+A K YSASK A+ T+ +A E+ P NIRVN V P
Sbjct: 132 FLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGF 191
Query: 61 VMTQM---------GRTGWSDPAKAGPMLAKTPLGRFA 89
V T M G + A ++ TPLGR
Sbjct: 192 VKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIE 229
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 89.1 bits (222), Expect = 8e-23
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTI-YSASKAALDSITRTMALELGPYNIRVNSVQPT 59
MI K +GSIV +SI+ TA EG + Y+A+K A+ +T ++ ELG Y IRVN V P
Sbjct: 140 MIPAK-KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPY 198
Query: 60 VVMTQMGRTGWSDPAKAGPMLAK---TPLGRFA-----ANA 92
+V + + + + LA G A+A
Sbjct: 199 IVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADA 239
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 89.1 bits (222), Expect = 8e-23
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
GSI+N++S+ A + Y SK AL +TR++A++ P IR N+V P +MT M
Sbjct: 133 GSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVI 191
Query: 68 TGWSDPAKAGP---------MLAKTPLGRFA 89
+ P+GR
Sbjct: 192 KAAKMEVGEDENAVERKIEEWGRQHPMGRIG 222
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 88.3 bits (220), Expect = 1e-22
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP-YNIRVNSVQPT 59
I+ I+G+I+N+ + A G +A+KA + ++T+T+A+E G Y IRVN++ P
Sbjct: 129 WIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPG 188
Query: 60 VVMTQMGRTG-WSDPAKAGPMLAKTPLGRF 88
+ G W A + PLGR
Sbjct: 189 PIERTGGADKLWISEEMAKRTIQSVPLGRL 218
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 88.9 bits (221), Expect = 1e-22
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 7 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
SIVN+ ++Y+ K AL +T++ ALEL PY IRVN V P V + +
Sbjct: 173 NLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV- 231
Query: 67 RTGWSDPAKAGPMLAKTPLGRFAANA 92
+ K K PLGR A+A
Sbjct: 232 --AMGEEEKDK-WRRKVPLGRREASA 254
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 88.8 bits (221), Expect = 1e-22
Identities = 38/104 (36%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI+ GSIV VSS AG A G+ YSASK L ++T T+A+ELG Y IRVNS+ P
Sbjct: 151 MIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYS 210
Query: 61 VMTQM------GRTGWSDPAKAGPMLAKT-PLGRFA-----ANA 92
V T M P+ F A+
Sbjct: 211 VETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADV 254
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 89.2 bits (222), Expect = 1e-22
Identities = 37/101 (36%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
++ K GSIV SSI G E Y ASK L + RTMALELGP NIRVN V P+
Sbjct: 164 IMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSS 223
Query: 61 VMTQM--------------GRTGWSDPAKAGPMLAKTPLGR 87
V T M D A + P+
Sbjct: 224 VATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY 264
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 88.1 bits (219), Expect = 2e-22
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G +A + + H Y+ SK A+ + R ++ +R+N V P V T + +
Sbjct: 134 GDEARAIELAEQQG-QTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ 192
Query: 68 TGWSDPAKAGPMLAK-TPLGRFA 89
+DP PLGR +
Sbjct: 193 ASKADPRYGESTRRFVAPLGRGS 215
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 88.0 bits (219), Expect = 2e-22
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 7 QGSIVNVSS-IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G I+ + S +A G ++YSASKAAL +T+ +A +LGP I VN V P T M
Sbjct: 158 GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDM 217
Query: 66 GRTGWSDPAKAGPMLAKTPLGRFA 89
+D A + G +
Sbjct: 218 NP---ADGDHAEAQRERIATGSYG 238
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 87.8 bits (218), Expect = 3e-22
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP-TVVMTQMG 66
SI+N+ L G+TIY+ +K AL+ +TR+ ALEL P IRVN V P V+
Sbjct: 177 YSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--- 233
Query: 67 RTGWSDPAKAGPMLAKTPL-GRF 88
G +K PL R
Sbjct: 234 -DDMPPAVWEG-HRSKVPLYQRD 254
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 87.2 bits (217), Expect = 3e-22
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Query: 7 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
G I+ +++ ++ Y+ +KA ++ TR + EL I VN++ P + T
Sbjct: 140 NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF 199
Query: 67 RTGWSDPAKAGPMLAKTPLGRF 88
++ +
Sbjct: 200 YGQ-ETKESTAFHKSQAMGNQL 220
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 87.7 bits (218), Expect = 3e-22
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 65
GS+V S AG G +Y+A+K A+ + R MA EL P ++RVN V P + T +
Sbjct: 135 GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRVNGVAPGGMNTDLRG 193
Query: 66 ------GRTGWSDPAKAGPMLAKTPLGRFA 89
S A + + P+GR
Sbjct: 194 PSSLGLSEQSISSVPLADMLKSVLPIGRMP 223
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 86.8 bits (216), Expect = 4e-22
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+IV V+S A T G + Y ASKAAL S+ ++ LEL +R N V P T M R
Sbjct: 126 GAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQR 185
Query: 68 TGWSDPAKAGP--------MLAKTPLGRFA 89
T W PLG+ A
Sbjct: 186 TLWVSDDAEEQRIRGFGEQFKLGIPLGKIA 215
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 86.4 bits (215), Expect = 5e-22
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+IVN SS A Y +K ++ +T+ ++ ELG NIR+N++ P + T+ R
Sbjct: 141 GAIVNQSSTAA---WLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANR 197
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
T ++ PL R
Sbjct: 198 TTTPKEMVDD-IVKGLPLSRM 217
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 86.4 bits (215), Expect = 6e-22
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 1 MIDHKIQGSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 59
M+ K G+I+N+SS+A + +YS +KAA+ +T+++A + IR N V P
Sbjct: 120 MLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPG 178
Query: 60 VVMTQMGR---TGWSDPAKA-GPMLAKTPLGRFA 89
V T + +P +A L + GRFA
Sbjct: 179 TVDTPSLQERIQARGNPEEARNDFLKRQKTGRFA 212
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 86.4 bits (215), Expect = 6e-22
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI G I+N+ S+ + A Y+A+K + +T +MA E +NI+ N++ P
Sbjct: 132 MIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGY 191
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
++T M D + + TP R+
Sbjct: 192 ILTDMNTALIEDKQFDSWVKSSTPSQRW 219
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 86.5 bits (215), Expect = 8e-22
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALE----GHTIYSASKAALDSITRTMALELGPYNIRVNSV 56
++ GSIV +SS AG + G Y A+K + + R A L IRVNS+
Sbjct: 144 LVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSI 203
Query: 57 QPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAANANIKF 96
P+ V T M ++ A A G ++
Sbjct: 204 HPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEV 243
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 86.1 bits (214), Expect = 8e-22
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI + SIVN+SS+ + + Y SK A+ +T+++AL+ P +R N+V P
Sbjct: 120 MIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPAT 177
Query: 61 VMTQMGRTGWSDPAKAGP---------MLAKTPLGRFA 89
+ T + R + P + P+ R
Sbjct: 178 IDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIG 215
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 87.1 bits (216), Expect = 9e-22
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP-TVVMTQMG 66
SI+N+ L G+TIY+ +K AL+ +TR+ ALEL P IRVN V P V+
Sbjct: 214 YSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--- 270
Query: 67 RTGWSDPAKAGPMLAKTPL-GRF 88
G +K PL R
Sbjct: 271 -DDMPPAVWEG-HRSKVPLYQRD 291
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 86.1 bits (214), Expect = 9e-22
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 7 QGSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G IV SS K ++ H++YS SK A+DS R + + G I VN+V P +T M
Sbjct: 145 GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204
Query: 66 ----------GRTGWSDPAKAGPMLAKTPLGRFA 89
T ++ + +PL R
Sbjct: 205 FHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNG 238
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 85.7 bits (213), Expect = 1e-21
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 8 GSIVNVSSIAGKTA-LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
++++ SIAG T G +Y A+KA L ++ + +R N V P V T
Sbjct: 143 SAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF- 201
Query: 67 RTGWSDPAKAGPMLAKTPLGRF 88
+ P+GRF
Sbjct: 202 -HADKTQDVRDRISNGIPMGRF 222
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 85.9 bits (213), Expect = 1e-21
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 4 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 63
+ ++VN+SS+ +G +Y A KAA D + + +A E ++RV S P +
Sbjct: 145 PGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDN 202
Query: 64 QMG---RTGWSDPAKAGPMLAKTPLGRFA 89
M R DP + G
Sbjct: 203 DMQQLARETSKDPELRSKLQKLKSDGALV 231
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 85.3 bits (212), Expect = 2e-21
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 12/94 (12%)
Query: 8 GSIVNVSSIAG-KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 65
G I+ SSIA T + H +Y+ SKAA++ R A++ G + VN + P V T M
Sbjct: 149 GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMF 208
Query: 66 ----------GRTGWSDPAKAGPMLAKTPLGRFA 89
G G + PL R
Sbjct: 209 DENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIG 242
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 85.3 bits (212), Expect = 2e-21
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTI--YSASKAALDSITRTMALELGPYNIRVNSVQP 58
M+D + G+I+ +S++G + Y SKAA+ +T+ MA+EL P+ IRVNSV P
Sbjct: 155 MVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSP 214
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
+ T++ A K PLGR
Sbjct: 215 GYIRTELVEPLADYHAL---WEPKIPLGRMG 242
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 85.0 bits (211), Expect = 2e-21
Identities = 31/126 (24%), Positives = 47/126 (37%), Gaps = 13/126 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G++V VSS A Y +SKAAL+ T+A E ++ +V P +V T M
Sbjct: 130 GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVAPGIVDTDMQV 187
Query: 68 TGWSDPAKAGPMLAKTPLGRFAANANIKFFFKEMGRTGW-SDPAKAGPMLAKTPLGRF-A 125
+ + ++ L F KE + S PA LA +
Sbjct: 188 NIRENVGPSS--MSAEQLKMFRG-------LKENNQLLDSSVPATVYAKLALHGIPDGVN 238
Query: 126 GECLKV 131
G+ L
Sbjct: 239 GQYLSY 244
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 84.9 bits (211), Expect = 2e-21
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 7 QGSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G+IV SS AG+ G Y+ SK A+ + TR +A E+GP IRVN+V P ++ T
Sbjct: 136 GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAVCPGMISTTF 194
Query: 66 GRTGWSDPAKAGPMLAKTPLGRF 88
T + P + T L R
Sbjct: 195 HDTF-TKPEVRERVAGATSLKRE 216
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 84.5 bits (210), Expect = 3e-21
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+I++ +SI L IY+ +KAAL ++T+A E+ NIRVN + P +++T
Sbjct: 137 GAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI 196
Query: 68 TGWSDPAKAGP----------MLAKTPLGRFA 89
+ K P+ RFA
Sbjct: 197 KTAKELTKDNGGDWKGYLQSVADEHAPIKRFA 228
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 85.0 bits (211), Expect = 3e-21
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 23/107 (21%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALE-----------GHTIYSASKAALDSITRTMALELGPY 49
+ SI+ S+AG A G YS +K +DS T +A +L P
Sbjct: 143 LTS---GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQ 199
Query: 50 NIRVNSVQPTVVMTQM---------GRTGWSDPAKAGPMLAKTPLGR 87
+IR N + PT V T M R P++A +LA +
Sbjct: 200 SIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQA 246
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 84.3 bits (209), Expect = 4e-21
Identities = 23/87 (26%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQM 65
G V + A G Y A+KAA I + +A E G P + P + T
Sbjct: 138 GLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT 197
Query: 66 GRTGWSDPAKAGPMLAKTPLGRFAANA 92
R SD TPL A
Sbjct: 198 NRKYMSDA----NFDDWTPLSEVAEKL 220
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 85.0 bits (211), Expect = 4e-21
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI+ GS++ VSS G G + Y+ASK + + ++A E+G +NIRVNSV P
Sbjct: 181 MIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGA 240
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFAANANIKFFFKEMGRTGWSDP 109
V T+M + T +A F + W +P
Sbjct: 241 VNTEMALNEKLLKMFLPHLENPTR-----EDAAELFSQLTLLPIPWVEP 284
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 84.6 bits (210), Expect = 5e-21
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 1 MIDHKIQ-GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 59
M + G I+N SI+ +T Y+A+K A+ +T++ AL+ ++I +
Sbjct: 158 MKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIG 217
Query: 60 VVMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
T M + +A +
Sbjct: 218 NAATDMTARMSTGVLQA---NGEVAAEPT 243
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 84.1 bits (209), Expect = 5e-21
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M+ H G IV ++S+ Y+ASK A+ +TR +A E + VN++ P
Sbjct: 152 MLAHG-SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGY 210
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
V+T +D +A + A+ P GR+
Sbjct: 211 VVTANTAALRADDERAAEITARIPAGRW 238
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 84.2 bits (209), Expect = 5e-21
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 8 GSIVNVSSIAGKT--ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G+IV VSSI G G T Y+A+KAA +I + +ALELG ++IRVN+V P + T +
Sbjct: 158 GAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI 217
Query: 66 GRTGWSDPAKAGPMLAKT-------PLGRFA 89
+ + + G+
Sbjct: 218 SDNTKLRHEEETAIPVEWPKGQVPITDGQPG 248
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 84.2 bits (209), Expect = 5e-21
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 8 GSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 65
G ++ + SI G+ A+ H +YS SK A+++ R MA+++ I VN V P + T M
Sbjct: 157 GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMY 216
Query: 66 ----------GRTGWSDPAKAGPMLAKTPLGRFA 89
G ++ + +PL R
Sbjct: 217 HAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVG 250
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 84.2 bits (209), Expect = 6e-21
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTI-YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
++N+ S+AG +A+ Y SKAAL ++R +A EL +I VN + P ++M
Sbjct: 161 ARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT 220
Query: 67 RTGWSDPAKAGPMLAKTPLGRF 88
R +DP A P+GR+
Sbjct: 221 RHIANDPQALEADSASIPMGRW 242
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 84.2 bits (209), Expect = 6e-21
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 1 MIDHKIQ--GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
M+ + SI+N++S++ Y SKA L + ++ +AL L I V V+P
Sbjct: 155 MLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRP 214
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
++ + M S P+ R+
Sbjct: 215 GIIRSDMTAAV-SGKYDGLIESGLVPMRRW 243
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 83.8 bits (208), Expect = 9e-21
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN+++ G ++KAA+D++TR +A+E GP NIRVNS+ P + G
Sbjct: 157 GVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGL 216
Query: 68 TGWSDPAKAGP-MLAKTPLGRF 88
P + + +PL R
Sbjct: 217 RRLGGPQASLSTKVTASPLQRL 238
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 83.3 bits (207), Expect = 9e-21
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M + G I+N++S +E +T Y ++KAA TR +A +LG I VN++ P++
Sbjct: 128 MKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSL 186
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
V T + R
Sbjct: 187 VRTATTEASALSAMFDVLPNMLQAIPRLQ 215
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 82.3 bits (204), Expect = 9e-21
Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 7 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
+GS + I + + + + A+ + ++ A+E+ IR+N+V P V+
Sbjct: 107 KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSPNVLEESWD 165
Query: 67 RTGWSDPAKAGPMLAKTPLGRFAA 90
+ P + A
Sbjct: 166 KLEPFFEGFLP-----VPAAKVAR 184
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 83.4 bits (207), Expect = 1e-20
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 1 MIDHKIQ-GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 59
M + + G I+N SI+ + Y+A+K A+ +T++ +L+ ++I +
Sbjct: 149 MKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIG 208
Query: 60 VVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
T M + + +A +
Sbjct: 209 NADTPMAQKMKAGVPQA---DLSIKVEPVM 235
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 83.1 bits (206), Expect = 1e-20
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 8 GSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
G +I G+ Y+ SK AL R A G +R+N++ P T +
Sbjct: 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL 193
Query: 67 RTGWSDPAKAGPMLAK-TPLGRFA 89
+ G DP + P+GR A
Sbjct: 194 QAGLQDPRYGESIAKFVPPMGRRA 217
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 83.0 bits (206), Expect = 1e-20
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 13/98 (13%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMAL--ELGPYNIRVNSVQPTVVMTQM 65
G I+N+SS+AG + +Y ASK + TR+ AL L +R+N++ P V T +
Sbjct: 133 GIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI 192
Query: 66 GRTGWSDPAKAGP------MLAKTPLGRFA-----ANA 92
+ + + AN
Sbjct: 193 LESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG 230
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 81.9 bits (203), Expect = 2e-20
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-G 66
G + NV S A + ++Y ASK + ++ EL +R+ ++ P+ + ++
Sbjct: 128 GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWD 187
Query: 67 RTGWSDPAKAGP 78
T DP+
Sbjct: 188 NTDHVDPSGFMT 199
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 82.2 bits (204), Expect = 2e-20
Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M K G I+ ++S + + Y++++A ++ ++ ELG YNI V ++ P
Sbjct: 119 MKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNY 177
Query: 61 VMTQM------GRTGWSDPAKAGPMLAKTPLGRF 88
+ ++ ++P + T L R
Sbjct: 178 LHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRL 211
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 81.5 bits (202), Expect = 5e-20
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHT--IYSASKAALDSITRTMALELGPYNIRVNSVQP 58
M+ G IV++++ + G + S +K L+++TR++A+E +RVN+V P
Sbjct: 142 MLKQG-SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSP 200
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
V+ T M + P+GR
Sbjct: 201 GVIKTPM-----HPAETHSTLAGLHPVGRM 225
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 81.0 bits (201), Expect = 5e-20
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALE--GHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
M + G ++ + S+ TA Y+ +K AL +TR +A E IRVN + P
Sbjct: 116 MAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP 174
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
V T+ +P P+ A+ P+GR+A
Sbjct: 175 GYVETEFTLPLRQNPELYEPITARIPMGRWA 205
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 80.7 bits (200), Expect = 9e-20
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALE-------GHTIYSASKAALDSITRTMALELGPYNIRV 53
+ + +GSIV SS++ + + Y++SKAA ++ + +A E IRV
Sbjct: 138 WLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRV 197
Query: 54 NSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
N++ P V T T D + PL RFA
Sbjct: 198 NALSPGYVNTDQ--TAHMDKKIRDHQASNIPLNRFA 231
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 80.3 bits (199), Expect = 1e-19
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M K G I NV+S A K IY ++K AL + ++ EL P IRV ++ P
Sbjct: 132 MKVQK-NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGW 190
Query: 61 VMTQM 65
V T M
Sbjct: 191 VNTDM 195
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 79.9 bits (198), Expect = 1e-19
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I ++S+A A +IY SK + TM L N+R+ VQP V T M
Sbjct: 138 GHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG 197
Query: 68 TGWSDPAKAGPM 79
D +A M
Sbjct: 198 K-VDDEMQALMM 208
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 80.8 bits (200), Expect = 1e-19
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+ GSIVN+ K A++A + ++T+++ALE IR+N V P V
Sbjct: 146 WMKEH-GGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGV 203
Query: 61 VMTQMG--RTGWSDPAKAGPMLAKTPLGRF 88
+ +Q G + K P R
Sbjct: 204 IYSQTAVENYGSWGQSFFEGSFQKIPAKRI 233
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 79.9 bits (198), Expect = 2e-19
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 1 MIDHKIQGSIVNVSSIAG-KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 59
+ + SI+N+ S+ + + + Y+ASK + S+T+ +A E G Y IRVN + P
Sbjct: 145 LRESD-NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPG 203
Query: 60 VVMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
T+M +SDP K ML + PLGR
Sbjct: 204 WYRTKMTEAVFSDPEKLDYMLKRIPLGRT 232
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 80.3 bits (199), Expect = 2e-19
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI G IV VSS+ G +A Y +SK + +T+ A +L Y I VN+V P
Sbjct: 145 MIKRN-YGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGN 203
Query: 61 VMTQM 65
+ T M
Sbjct: 204 IETPM 208
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 80.5 bits (199), Expect = 2e-19
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+++ G I +S AG G Y +K + + T+A E+ P I V+ + P V
Sbjct: 154 LLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMV 213
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFAANA 92
V T++ A ++ TP G F
Sbjct: 214 VETKLVSNSERIRG-ADYGMSATPEGAFGPLP 244
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 79.6 bits (197), Expect = 2e-19
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I N+ S+ G A+ +YSASKAA+ S T ++A + S+ P + T +
Sbjct: 131 GIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVH 190
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
T S +
Sbjct: 191 TFNSWLDVEPRVAELLLSHPT 211
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 79.5 bits (197), Expect = 4e-19
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
SI+ SSI Y+A+KAA+ + +R +A ++ IRVN V P + T +
Sbjct: 179 ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQI 238
Query: 68 TGWSDPAKAGPMLAKTPLGRFA 89
+G K +TP+ R
Sbjct: 239 SGGQTQDKIPQFGQQTPMKRAG 260
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 78.0 bits (193), Expect = 7e-19
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G ++ ++S AG G+TIY+ASK AL + E IRV++V P T M +
Sbjct: 126 GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ 185
Query: 68 TGWSDPAKAGPMLAKTPL 85
G D + +
Sbjct: 186 -GLMDSQGTN-FRPEIYI 201
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 77.3 bits (191), Expect = 2e-18
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M+ QG IV +SS + + Y KAA D + A EL + + S+ P +
Sbjct: 136 MVPAG-QGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGI 193
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
V T++ + + + K F+
Sbjct: 194 VQTELLKEHMAKEEVLQDPVLKQFKSAFS 222
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 77.2 bits (191), Expect = 2e-18
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 65
G +V + S+ + + + + + + RT+ALEL P+ + VN+V P++++T
Sbjct: 137 GRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR 196
Query: 66 -------GRTGWSDPAKAGPMLAKTPLGRFA 89
R+G + M ++ P+GR
Sbjct: 197 SLAEERARRSGITVEEALKSMASRIPMGRVG 227
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 77.2 bits (191), Expect = 2e-18
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
++ + +GSI+N+SSI GK G T Y+ASKA + +T+T A ELG + IR NSV P
Sbjct: 138 LVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGF 197
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
+ T M + + P+G
Sbjct: 198 IATPMTQK-VPQKVVDK-ITEMIPMGHL 223
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 76.9 bits (190), Expect = 3e-18
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 65
G I+N++S+ G G Y A+K + +T+ + LE N+ N++ P V+T +
Sbjct: 131 GRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ 190
Query: 66 -------GRTGWSDPAKAGPMLAKTPLGRFA 89
G A+ + K P F
Sbjct: 191 KQIDDRAANGGDPLQAQHDLLAEKQPSLAFV 221
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 76.9 bits (190), Expect = 3e-18
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N++S G A + Y A+K + +T+T+ALE+ + VNS+ P V+T +
Sbjct: 156 GRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVE 215
Query: 68 TGWSDPAKAGP----------MLAKTPLGRFA 89
D A+ ML P +F
Sbjct: 216 KQIPDQARTRGITEEQVINEVMLKGQPTKKFI 247
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 76.5 bits (189), Expect = 3e-18
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N+SS+AGK + Y+ASK L+ + + A EL + +RV+ V P V T+ G
Sbjct: 159 GHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV 218
Query: 68 TGWSDPAKAGPMLAKTP 84
AK + A P
Sbjct: 219 ---GLSAKKSALGAIEP 232
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 76.0 bits (188), Expect = 4e-18
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL-GPYNIRVNSVQPTVVMTQMG 66
SI SS G+ Y SK A + + +T+A EL G +R NS+ P T M
Sbjct: 147 ASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR 206
Query: 67 RTGWSDPAKAGPMLAKTP 84
+ D P+ P
Sbjct: 207 AQAYPDEN---PLNNPAP 221
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 75.6 bits (187), Expect = 5e-18
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
++ G+IVNV S+AGK +G Y+ASK L + L+L N+RV +V P
Sbjct: 124 LLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGS 182
Query: 61 VMTQM 65
V T
Sbjct: 183 VDTGF 187
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 76.0 bits (188), Expect = 5e-18
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IV ++S + + +E ++++ AL +T++ E+ PY I VN V P T+ +
Sbjct: 133 GRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK 192
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
S+ K + ++ P+ R
Sbjct: 193 ELLSEEKKKQ-VESQIPMRRM 212
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 76.0 bits (188), Expect = 5e-18
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M G +++++S Y A+K + TR +A ELG YNI N+V P +
Sbjct: 126 MRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGL 185
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
+ + + G + +
Sbjct: 186 IESDGVKAS-PHNEAFGFVEMLQAMKGK 212
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 75.8 bits (187), Expect = 5e-18
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQM 65
G + + A G Y +K A+ + +++A + P +V P + T M
Sbjct: 127 GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM 186
Query: 66 GRTGWSD 72
R +
Sbjct: 187 NRKSMPE 193
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 74.9 bits (185), Expect = 7e-18
Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
V + + G Y+A+K AL++ EL + + V+ V
Sbjct: 114 ARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAV-----A 168
Query: 68 TGWSDPAKAGPMLAKTP 84
TG P P A +P
Sbjct: 169 TGLWAPLGGPPKGALSP 185
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 74.5 bits (184), Expect = 1e-17
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
D ++V + S A + + Y A K A+ + ++ LEL +++ +V P
Sbjct: 118 YKDQP--VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGG 175
Query: 61 VMTQMGRTGWSDPAKAGPMLA 81
+ T+ T + M A
Sbjct: 176 MATEFWETSGKSLDTSSFMSA 196
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 75.5 bits (186), Expect = 2e-17
Identities = 18/88 (20%), Positives = 36/88 (40%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G +VN +S+A A IY+ +K A+ ++ ++ L Y I V+ + P +V + +
Sbjct: 145 GHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYA 204
Query: 68 TGWSDPAKAGPMLAKTPLGRFAANANIK 95
+ P + A +
Sbjct: 205 SDDIRPDALKGEVKPVDKTAVERLAGVH 232
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 74.1 bits (183), Expect = 3e-17
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 7 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
GS+V S+AG A G Y+A K + + RT+ALEL +RVN + P ++ T M
Sbjct: 129 GGSLVLTGSVAGLGAF-GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM- 186
Query: 67 RTGWSDPAKAGPMLAKTPLGRF 88
T P + +PLGR
Sbjct: 187 -TAGLPPWAWEQEVGASPLGRA 207
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 73.3 bits (181), Expect = 6e-17
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
GS+V SS G+ Y+ASK A + + + +A E +RVN + P T M
Sbjct: 145 GSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RLRVNCINPGGTRTAM 201
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 73.1 bits (180), Expect = 9e-17
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 7 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTVVMTQ 64
GSIV VSS+AGK A YSASK ALD ++ E N+ + ++ T+
Sbjct: 156 NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 215
Query: 65 MGRTGWSDPAKAGPM 79
S
Sbjct: 216 TAMKAVSGIVHMQAA 230
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 72.7 bits (179), Expect = 1e-16
Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 9/83 (10%)
Query: 8 GSIVNVSSIAGKTA-LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
I+ +S T Y +K + +A EL I N++ P
Sbjct: 145 PHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWP-------- 196
Query: 67 RTGWSDPAKAGPMLAKTPLGRFA 89
RT + A + + R
Sbjct: 197 RTTVATAAVQNLLGGDEAMARSR 219
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 72.2 bits (178), Expect = 1e-16
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 14/84 (16%)
Query: 8 GSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP-TVVMTQ 64
I+ ++ HT Y+ +K + +T +A E GP + +N++ P TV+ T
Sbjct: 142 PHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD 201
Query: 65 MGRTGWSDPAKAGPMLAKTPLGRF 88
ML
Sbjct: 202 AIN-----------MLPGVDAAAC 214
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 71.9 bits (177), Expect = 2e-16
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N++S G A + Y A+K + T+ ALE I N++ P V T +
Sbjct: 135 GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE 194
Query: 68 TGWSDPAKAGP----------MLAKTPLGRF 88
S A+ + K P +F
Sbjct: 195 KQISALAEKNGVDQETAARELLSEKQPSLQF 225
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 72.2 bits (178), Expect = 2e-16
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGH--TIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
+ +GS++ SSI+GK Y+ +KAA + +++A+E P+ RVN++ P
Sbjct: 159 FKKNG-KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF-ARVNTISP 216
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
+ T + D TPLGR
Sbjct: 217 GYIDTDITDFASKDMKAK--WWQLTPLGREG 245
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 71.9 bits (177), Expect = 2e-16
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
GS+VN+SS G+ + G + YSA+KAAL+ ++ +A E+ P+ I+V V+P R
Sbjct: 131 GSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAF-----R 185
Query: 68 TGWSDPAKAGPMLAKTPLGRFAANAN-IKFFFKEMGRTGWSDPAKA 112
T G +A + + + DPAKA
Sbjct: 186 TNL---FGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKA 228
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 71.4 bits (176), Expect = 3e-16
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 8 GSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
G +V SSI G T G + Y A+KAA RT A+EL P+ I VN++ P +MT+
Sbjct: 140 GRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGL 199
Query: 67 RTGWSDPAKAGPMLAKTPLGRF 88
+ A M P G
Sbjct: 200 L-ENGEEYIAS-MARSIPAGAL 219
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 71.4 bits (176), Expect = 3e-16
Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 65
G ++ ++S A + YSA+K S++R++A N+ VN++ P +T+
Sbjct: 137 GRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVE 196
Query: 66 -------GRTGWSDPAKAGPMLAK----TPLGRFA 89
+ + + + + R
Sbjct: 197 TMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLI 231
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 71.1 bits (175), Expect = 4e-16
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN++S GK + Y+ASK + T+++ EL I VN+V P V T M
Sbjct: 155 GRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAE 214
Query: 68 TGWSDPAKAGP---------MLAKTPLGRF 88
A+ AK PLGR+
Sbjct: 215 RVREGYARHWGVTEQEVHERFNAKIPLGRY 244
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 71.1 bits (175), Expect = 4e-16
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV---MTQ 64
G IVN++S GK + YSASK + T+ + LEL I VN+V P V M
Sbjct: 153 GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA 212
Query: 65 MGRTGWSDPAKAGP------MLAKTPLGRF 88
R +SD + + A+ P+GR+
Sbjct: 213 SVREHYSDIWEVSTEEAFDRITARVPIGRY 242
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 70.7 bits (174), Expect = 6e-16
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M G+I+N+SSIAGK H Y +K A+ +I+ + E+ N+RV ++ P+
Sbjct: 133 MKARN-CGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSA 191
Query: 61 VMT 63
V T
Sbjct: 192 VKT 194
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 70.0 bits (172), Expect = 6e-16
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQM 65
G + + A Y +KAA+ +T ++A + P N V ++ P + T M
Sbjct: 123 GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM 182
Query: 66 GRTGWSDP 73
R +
Sbjct: 183 NRKWMPNA 190
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 70.3 bits (173), Expect = 8e-16
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 1 MIDHKIQGSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
+ GS+V +S++G A + T Y+ +KA + R++A E + RVNS+ P
Sbjct: 147 FKERG-TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISP 204
Query: 59 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 89
+ T + + + + P+GR
Sbjct: 205 GYIDTGL--SDFVPKETQQLWHSMIPMGRDG 233
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 69.9 bits (172), Expect = 1e-15
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 8 GSIVNVS--SIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G I+N + ++A+K L S+T+T+A E Y I N V P ++ +M
Sbjct: 139 GRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEM 198
Query: 66 GRTGWSDPAKAGPMLAKTPLGRF 88
+ TP+GR
Sbjct: 199 --KEATIQEARQLKEHNTPIGRS 219
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 70.3 bits (173), Expect = 1e-15
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
MI G I+N+ S+ + E + Y+A+K L +T+ +A E G NI+ N + P
Sbjct: 157 MIKKG-HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGY 215
Query: 61 VMTQMGRTGWSDPAKAGP------MLAKTPLGRF 88
+ T ++AKTP R+
Sbjct: 216 IATPQTAPLRELQKDGSRHPFDQFIIAKTPAARW 249
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 70.5 bits (173), Expect = 1e-15
Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 1/113 (0%)
Query: 7 QGSIVNVSSIAGKTALE-GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G ++ +SS + Y A+KAA+D+I A EL + I + + P +
Sbjct: 138 HGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197
Query: 66 GRTGWSDPAKAGPMLAKTPLGRFAANANIKFFFKEMGRTGWSDPAKAGPMLAK 118
S A+ G A +D + + +
Sbjct: 198 NHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVR 250
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 69.1 bits (170), Expect = 2e-15
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 63
G++V +SSIAG+ + +Y A+K +++ + T+ E+ +RV ++P T
Sbjct: 135 GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDT 190
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 69.0 bits (170), Expect = 2e-15
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N++SIAG G Y+ASKA L T+++A E I N+V P ++ T M
Sbjct: 135 GKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD 194
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
D K L PL RF
Sbjct: 195 -VLPDKVKEM-YLNNIPLKRF 213
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 69.5 bits (171), Expect = 2e-15
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 8 GSIVNVSSIAGKTALEGHTI---YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 64
I+N +SI A EG+ YSA+K A+ + TR+++ L IRVN V P + T
Sbjct: 176 DVIINTASI---VAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTP 232
Query: 65 MGRTGWSDPAKAGPMLAKTPLGRFA 89
+ + + + + + P+ R
Sbjct: 233 LIPSSFDEKKVSQ-FGSNVPMQRPG 256
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 69.6 bits (171), Expect = 2e-15
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 8 GSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
G ++ SSI G T G + Y ASKAA RT A+EL P + VN++ P ++T+
Sbjct: 171 GRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL 230
Query: 67 RTGWSDPAKAGPMLAKTPLGRF 88
+ +G M P+G
Sbjct: 231 V-DMGEEYISG-MARSIPMGML 250
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 68.7 bits (169), Expect = 2e-15
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N++S+ G G Y+A+KA + ++T A E NI VN V P + + M
Sbjct: 131 GRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA 190
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+ + +L PLGR
Sbjct: 191 -KLGEDMEKK-ILGTIPLGRT 209
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 69.2 bits (170), Expect = 2e-15
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+I H SIVN+ S+AGK G +Y +KA ++ + + +L +RV +++P +
Sbjct: 144 LIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGL 203
Query: 61 VMT 63
+
Sbjct: 204 CES 206
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 68.3 bits (168), Expect = 3e-15
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN++S+ G T G Y A+KA + +T+T A EL NI VN++ P + T M
Sbjct: 134 GRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTD 193
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+ KA ML P +F
Sbjct: 194 -VLDENIKAE-MLKLIPAAQF 212
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 68.5 bits (168), Expect = 3e-15
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRV-NSVQPT 59
M+ H QG I + A G ++++K L ++ ++MA EL P NI V + + +
Sbjct: 129 MLAHG-QGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDS 187
Query: 60 VVMTQMGRTGWSDPAKAGPMLAKTPLGRFAANANIKFFFKEMGRTGWS 107
V T R + L AA A + + ++ W+
Sbjct: 188 GVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQPKSAWT 235
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 68.3 bits (168), Expect = 3e-15
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M++ G I+N+ S AG G +Y A+KA + + + +L +RV ++P +
Sbjct: 121 MVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGL 179
Query: 61 VMT 63
V
Sbjct: 180 VGG 182
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 68.3 bits (168), Expect = 4e-15
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN++S+ G G Y ASKA L TR +A E I VN+V P + T+M
Sbjct: 132 GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE 191
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
K L + P GRF
Sbjct: 192 -RLPQEVKEA-YLKQIPAGRF 210
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 67.9 bits (167), Expect = 4e-15
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G+I+N+SS+ G G Y A+KA + +T++ A EL I VN+V P +++ M
Sbjct: 134 GAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD 193
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
SD K ML + PL RF
Sbjct: 194 -ALSDELKEQ-MLTQIPLARF 212
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 67.9 bits (167), Expect = 5e-15
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
+I +K G I+N++S + Y+++K + ++T +A+ LGP ++ VN + P
Sbjct: 121 LIKNK--GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGW 177
Query: 61 VMTQMGRTGWSDPAKAGPMLAKTPLGRF 88
+ + + A P G+
Sbjct: 178 INVTE----QQEFTQE--DCAAIPAGKV 199
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 68.6 bits (168), Expect = 5e-15
Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 3/112 (2%)
Query: 7 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 66
G ++ S+ G L + +Y ASK AL+ + ++A+ L P+ + ++ ++ V T
Sbjct: 134 SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193
Query: 67 RTGWSDPAKAGPMLAKTPLGRFAANANIKFFFKEMGRTGWSDPAKAGPMLAK 118
P + RF + + +P + +
Sbjct: 194 EKVLGSPEEVLDRTDIHTFHRFY--QYLAHSKQVFREAA-QNPEEVAEVFLT 242
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 68.1 bits (167), Expect = 6e-15
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G++V +SIAG G T Y+A+KA + +T A +L IRVN++ P + T +
Sbjct: 167 GALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI 224
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 68.0 bits (167), Expect = 7e-15
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N+SSI G T G YS+SKA + T+++A EL NI VN++ P + + M
Sbjct: 173 GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD 232
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
S+ K +++ P GR
Sbjct: 233 -KISEQIKKN-IISNIPAGRM 251
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 68.1 bits (167), Expect = 7e-15
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
G IVN+ SIAG+ A +IY ASK A+ + T ++ EL IRV + P +
Sbjct: 162 FQAKN-SGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGL 220
Query: 61 VMT 63
V T
Sbjct: 221 VET 223
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 67.6 bits (166), Expect = 8e-15
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN++S+ G G Y+A+KA + +TR +A E+G I VN V P + T M +
Sbjct: 157 GRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK 216
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
G + + + PLGR
Sbjct: 217 -GLPQEQQTA-LKTQIPLGRL 235
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 67.6 bits (166), Expect = 8e-15
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN+ S+ G G Y+++KA + T+T+ALE I VN+V P + T M
Sbjct: 155 GRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVE 214
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+L + P+GR
Sbjct: 215 -AVPQDVLEAKILPQIPVGRL 234
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 67.2 bits (165), Expect = 8e-15
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G ++ + S++G + Y+ASKA + + R++A EL N+ N V P + T M R
Sbjct: 133 GRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR 192
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+ + G L P R
Sbjct: 193 -ALDERIQQG-ALQFIPAKRV 211
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 66.7 bits (164), Expect = 1e-14
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+NV S+ G G Y+A+KA + T++MA E+ + VN+V P + T M +
Sbjct: 135 GRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK 194
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+D + LA+ P GR
Sbjct: 195 -ALNDEQRTA-TLAQVPAGRL 213
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 66.9 bits (164), Expect = 1e-14
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G I+N +S+A G YSASK + +T +A +L P IRV ++ P + T +
Sbjct: 150 GVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 66.8 bits (164), Expect = 1e-14
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
GSIV +S G Y+AS A + +TRT+ALELG + IRVN++ P + T+M
Sbjct: 129 GSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA 187
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+ + +A TPLGR
Sbjct: 188 K-VPEKVREK-AIAATPLGRA 206
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 66.4 bits (163), Expect = 2e-14
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G IVN+SS+ G T G YS +KA L T+++A EL P N+ VN+V P + T M
Sbjct: 137 GRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA 196
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
S+ K + PLGRF
Sbjct: 197 -VLSEEIKQK-YKEQIPLGRF 215
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 66.4 bits (163), Expect = 2e-14
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G +V +SS+ G G Y+ASKA L R++A ELG NI N V P V T M +
Sbjct: 139 GRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK 198
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+D +A ++++ PLGR+
Sbjct: 199 -VLTDEQRAN-IVSQVPLGRY 217
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 65.7 bits (161), Expect = 3e-14
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G IVN +SIA G Y+ASK + ++T A EL + IRV ++ P + T M
Sbjct: 143 GVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM 200
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 65.6 bits (161), Expect = 4e-14
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+++ S+ G G T Y A+KA + ++++A E+ NI VN V P + T M
Sbjct: 134 GRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTD 193
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
+D K+ + K P G+
Sbjct: 194 -KLTDEQKSF-IATKIPSGQI 212
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 65.6 bits (161), Expect = 4e-14
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N+SS+ G+ G T YS +KA + T ++A E+ + VN+V P + T M +
Sbjct: 143 GRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK 202
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
++A P+ R
Sbjct: 203 -AIRPDVLEK-IVATIPVRRL 221
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 65.2 bits (160), Expect = 5e-14
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N+SSI G G Y ASKA L +T++++ E+ I VN+V P + + M
Sbjct: 136 GRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD 195
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
++ + ++ K PLG +
Sbjct: 196 -KLNEKQREA-IVQKIPLGTY 214
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 65.3 bits (160), Expect = 6e-14
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 60
M + G I+N+ SI + + +Y A+K A+ +I+ + E NIRV V P V
Sbjct: 127 MEAQR-SGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPGV 183
Query: 61 VMTQMG--RTGWSDPAKAGPMLAKTPL 85
V +++ T + A L
Sbjct: 184 VESELAGTITH-EETMAAMDTYRAIAL 209
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 64.9 bits (159), Expect = 7e-14
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N++SI G G T Y A+KA L ++ +A E+ NI VN + P + + M
Sbjct: 153 GRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD 212
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
++ K ++A P+ R
Sbjct: 213 -KLNEKQKEA-IMAMIPMKRM 231
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 64.9 bits (159), Expect = 7e-14
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N++S+ G+ G YSA+KA + +T+T+A EL I VN+V P + T M
Sbjct: 158 GRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM-- 215
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
T K +L PLGR+
Sbjct: 216 TSELAAEK---LLEVIPLGRY 233
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 64.5 bits (158), Expect = 9e-14
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
++V S ++ + + Y ++K A ++ RT +E ++R ++P V T G
Sbjct: 132 LALVTTSDVSAR-LIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGG 188
Query: 68 TGWSDPAKAGPMLA 81
+ P + G +
Sbjct: 189 SKPGKPKEKGYLKP 202
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 63.8 bits (156), Expect = 1e-13
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G IVN +S+A G Y+ASK + ++T A EL + IRV +V P + T +
Sbjct: 128 GVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 185
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 63.8 bits (156), Expect = 2e-13
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G I+N +S+A G YSASK + +T +A +L + IRV ++ P + T +
Sbjct: 143 GVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL 200
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 60.5 bits (147), Expect = 3e-12
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 7 QGSIVNVSSIAG---KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 63
+ +I+N+SSI G G Y SK+AL++ T++++++L P I S+ P V T
Sbjct: 165 RAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT 224
Query: 64 QMG 66
MG
Sbjct: 225 DMG 227
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 61.2 bits (149), Expect = 3e-12
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G ++ +SS+AG G T Y+ +KA + + +A L I +N+V P + T+M
Sbjct: 340 GRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM-- 397
Query: 68 TGWSDPAKAGPMLAKTPLGRF 88
T A L +
Sbjct: 398 TEAIPLATREVGRRLNSLFQG 418
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 60.5 bits (147), Expect = 5e-12
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G IVN SS AG G Y+++K+AL T+A E YNI+ N++ P ++M
Sbjct: 143 GRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRM 199
Score = 59.3 bits (144), Expect = 1e-11
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 67
G I+N++S +G G YS+SKA + +++TMA+E NI+VN V P T M
Sbjct: 447 GRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH-AETAMTL 505
Query: 68 TGWSDPAKA 76
+ + K
Sbjct: 506 SIMREQDKN 514
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 60.0 bits (146), Expect = 6e-12
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 1 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPY---NIRVNSVQ 57
M + G IV V+S AG ++ Y +SK A +T+ EL ++ +
Sbjct: 154 MTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLC 212
Query: 58 PTVVMTQM 65
P V T
Sbjct: 213 PNFVNTGF 220
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 59.2 bits (144), Expect = 1e-11
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 1 MIDHKIQ-GSIVNVSSIAGKTALE--GHTIYSASKAALDSITRTMALELGP--YNIRVNS 55
M + + G I+N++S++G L YSA+K A+ ++T + EL +IR
Sbjct: 157 MKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATC 216
Query: 56 VQPTVVMTQMGRTGWS-DPAKAGPMLAKTP 84
+ P VV TQ DP KA +
Sbjct: 217 ISPGVVETQFAFKLHDKDPEKAAATYEQMK 246
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 58.5 bits (142), Expect = 1e-11
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 7 QGSIVNVSSIAG-------KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 59
+ +++ +SS G +A Y SKAA++ RT+A++L N+ V + P
Sbjct: 144 RAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPG 203
Query: 60 VVMTQMG 66
V T +G
Sbjct: 204 WVQTNLG 210
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 58.1 bits (141), Expect = 3e-11
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G I+ +S +G G YSA+K L + T+ +E NI N++ P ++M
Sbjct: 144 GRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPN-AGSRM 200
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 57.9 bits (140), Expect = 4e-11
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 8 GSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP-TVVMTQ 64
I+N+S + H Y+ +K + MA E I VN++ P T + T
Sbjct: 181 AHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKG-EIAVNALWPKTAIHTA 239
Query: 65 MGRTGWSDPAKA 76
++
Sbjct: 240 AMDMLGGPGIES 251
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 57.1 bits (138), Expect = 8e-11
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV--MTQ- 64
G I+ SS +G G Y+A+K L + T+A+E N+ N + PT MT+
Sbjct: 154 GRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEG 213
Query: 65 ---MGRTGWSDPAKAGPMLA 81
P P++A
Sbjct: 214 ILPDILFNELKPKLIAPVVA 233
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 56.6 bits (137), Expect = 9e-11
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 65
G I+N SS AG G YSA+KA + ++T A E+G Y + VN++ P+ T+M
Sbjct: 172 GRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRM 228
>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH];
oxidoreductase, short-chain dehydrogenase/reductase
superfam fatty acid biosynthesis; HET: NAP E9P GLU;
1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A*
4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A*
Length = 282
Score = 44.6 bits (106), Expect = 1e-06
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
GSIV + + G+ A++ + + +KA+L++ + +AL+LGP NIRVN++
Sbjct: 166 GSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISA 216
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 44.6 bits (105), Expect = 2e-06
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 28 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL 85
Y+ SKA L++ TR +A ++ +VN V P +V T+M + A+ G A+ +
Sbjct: 236 YTTSKACLNAYTRVLANKIP--KFQVNCVCPGLVKTEMNYGIGNYTAEEG---AEHVV 288
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid
biosynthesis, oxidation reduction; 1.50A {Thermus
thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Length = 261
Score = 44.1 bits (105), Expect = 2e-06
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
G IV ++ A + + + + + +KAAL++ R +A ELGP +RVN++
Sbjct: 140 GGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISA 190
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase,
oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia
coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A*
1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A*
1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Length = 265
Score = 44.1 bits (105), Expect = 2e-06
Identities = 13/51 (25%), Positives = 30/51 (58%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
+++ +S + + A+ + + +KA+L++ R MA +GP +RVN++
Sbjct: 142 SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA 192
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid
synthesis, rossmann-like fold, enoyl-ACP reductas
binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB:
3oif_A* 2qio_A* 3oje_A 3ojf_A*
Length = 266
Score = 43.7 bits (104), Expect = 3e-06
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
GSIV ++ + G+ + + + +KA+LD+ + +A +LG NIRVNS+
Sbjct: 141 GSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISA 191
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid,
structural genomics, seattle structural genomics center
for infectious disease; 2.35A {Brucella melitensis} PDB:
4eit_A*
Length = 293
Score = 43.4 bits (103), Expect = 4e-06
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
GSI+ ++ + + + + +KAAL++ + +A++LGP NIRVN++
Sbjct: 163 GSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISA 213
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI,
UW, decode, eonyl-(acyl-carrier-PR reductase, NAD,
oxidoreductase; HET: NAD; 1.80A {Anaplasma
phagocytophilum} PDB: 3k2e_A*
Length = 296
Score = 43.4 bits (103), Expect = 4e-06
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
GSI+ +S + + + + KAAL++ + +A++LG IRVN++
Sbjct: 162 GSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISA 212
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent
enoyl-ACP reductase, FABI, aquifex A VF5, structural
genomics, PSI; 2.00A {Aquifex aeolicus}
Length = 285
Score = 43.4 bits (103), Expect = 4e-06
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
G+IV +S + + + + +KAAL+S R +A ++ + R+N++
Sbjct: 154 GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISA 204
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH
BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella
tularensis subsp} PDB: 2jjy_A*
Length = 280
Score = 43.4 bits (103), Expect = 4e-06
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
S+V ++ I + A+ + +KA+L++ R AL LG I+VN+V
Sbjct: 159 ASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSA 209
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid,
oxidoreductase, structural genomics; 1.90A {Burkholderia
pseudomallei 1710B}
Length = 271
Score = 43.3 bits (103), Expect = 4e-06
Identities = 14/51 (27%), Positives = 29/51 (56%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
S++ +S + + A+ + +KAAL++ R +A+ LG +RVN++
Sbjct: 147 ASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISA 197
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial
target, type II fatty acid biosynthesis,
enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A
{Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Length = 275
Score = 43.0 bits (102), Expect = 5e-06
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 8 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 58
S++ +S + + + + +KAAL+S R +A++LG ++IRVN++
Sbjct: 138 ASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSA 188
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase,
INHA, enoyl acyl carrier reductase, pyrrolid
carboxamide; HET: NAD 566; 1.62A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A*
2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A*
2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A*
3fnh_A* 3oew_A* 2aqh_A* ...
Length = 269
Score = 42.6 bits (101), Expect = 7e-06
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 32 KAALDSITRTMALELGPYNIRVNSV 56
K+AL+S+ R +A E G Y +R N V
Sbjct: 165 KSALESVNRFVAREAGKYGVRSNLV 189
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 41.6 bits (98), Expect = 2e-05
Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 48/126 (38%)
Query: 5 KIQGSIVNVSSIAGKTALEGH--------------------------------------- 25
K QG +VNVSSI AL+
Sbjct: 129 KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGW 188
Query: 26 --TIYSASKAALDSITRTMALEL----GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM 79
+ Y +K + ++R A +L I +N+ P V T M + + G
Sbjct: 189 PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEG-- 246
Query: 80 LAKTPL 85
A+TP+
Sbjct: 247 -AETPV 251
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl
reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica
napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Length = 297
Score = 40.8 bits (96), Expect = 3e-05
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 8 GSIVNVSSIAGKTALEGHTIY-SASKAALDSITRTMALELGP-YNIRVNSVQP 58
G+ ++++ IA + + G+ S++KAAL+S TR +A E G NIRVN++
Sbjct: 171 GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA 223
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann
fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma
gondii} PDB: 2o50_A 3nj8_A*
Length = 315
Score = 40.5 bits (95), Expect = 4e-05
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 22/96 (22%)
Query: 8 GSIVNVSSIAGKTALEGHT-IYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQM 65
GS V +S +A + + G+ S++KAAL+S TRT+A E G Y +RVN++
Sbjct: 172 GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAIS-------- 223
Query: 66 GRTGWSDPAKAGPMLAKTPLGRFAANANIKFFFKEM 101
AGP+ K+ + K F
Sbjct: 224 ----------AGPL--KSRAASAIGKSGEKSFIDYA 247
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P
reductase, oxidoreductase; 2.60A {Eimeria tenella}
Length = 319
Score = 40.2 bits (94), Expect = 6e-05
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 8 GSIVNVSSIAGKTALEGHTIY-SASKAALDSITRTMALELG-PYNIRVNSVQPTVVMTQM 65
GS + +S IA + + G+ S++KAAL+S RT+A E G +RVN + + ++
Sbjct: 185 GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA 244
Query: 66 GR--TGWSDPAKAGPML----AKTPLGR 87
D + A PL +
Sbjct: 245 ASAIGKAGDKTFIDLAIDYSEANAPLQK 272
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu
P.falciparum; HET: NAD FT1; 1.96A {Plasmodium
falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A*
3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A*
2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A*
2foi_A* ...
Length = 329
Score = 39.5 bits (92), Expect = 9e-05
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 8 GSIVNVSSIAGKTALEGHT-IYSASKAALDSITRTMALELGP-YNIRVNSV 56
SI++++ A + + G+ S++KAAL+S TR +A LG YNIR+N++
Sbjct: 165 SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTI 215
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding,
fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Length = 422
Score = 39.7 bits (92), Expect = 1e-04
Identities = 12/60 (20%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 7 QGSIVNVSSIAGKTALE--GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 64
V S I + H +K LD + + L + N V+TQ
Sbjct: 238 GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 28.7 bits (65), Expect = 0.41
Identities = 17/100 (17%), Positives = 27/100 (27%), Gaps = 20/100 (20%)
Query: 5 KIQGSIVNVSSIA-------------GKTALEGHTIYSASKAALDSITRTMA--LELGPY 49
++ +V VSS+A YS SK A T + L
Sbjct: 129 RLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGS 188
Query: 50 NIRVNSVQPTVVMTQMGRTGWSDPAKA-----GPMLAKTP 84
+R + P T + A ++A
Sbjct: 189 PLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDA 228
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for
structural genomics of infectio diseases, csgid, niaid;
HET: NAD SUC; 3.00A {Bacillus anthracis}
Length = 346
Score = 26.3 bits (59), Expect = 3.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 20 TALEGHTIYSASKAALDSITR 40
T L ++ YS+SKA+ D I
Sbjct: 166 TPLAPNSPYSSSKASADMIAL 186
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain
dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A
{Salmonella typhi} SCOP: c.2.1.2
Length = 347
Score = 26.4 bits (59), Expect = 3.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 19 KTALEGHTIYSASKAALD 36
T L+ H+ Y SK A D
Sbjct: 156 STQLDFHSPYGCSKGAAD 173
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET:
TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2
PDB: 1g1a_A* 1keu_A* 1bxk_A*
Length = 361
Score = 25.9 bits (58), Expect = 4.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 20 TALEGHTIYSASKAALDSITR 40
TA + YSASKA+ D + R
Sbjct: 159 TAYAPSSPYSASKASSDHLVR 179
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold,
structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus
horikoshii}
Length = 336
Score = 25.5 bits (57), Expect = 5.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 20 TALEGHTIYSASKAALDSITR 40
L + YSA+KAA D +
Sbjct: 143 DRLMPSSPYSATKAASDMLVL 163
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD;
1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A*
1ket_A* 1kep_A*
Length = 348
Score = 24.8 bits (55), Expect = 9.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 20 TALEGHTIYSASKAALDSITR 40
T + YS++KAA D I +
Sbjct: 153 TNYNPSSPYSSTKAASDLIVK 173
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain
dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A
{Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Length = 337
Score = 24.8 bits (55), Expect = 10.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 20 TALEGHTIYSASKAALDSITR 40
+ LE ++ Y+ASKA D + R
Sbjct: 143 SPLEPNSPYAASKAGSDLVAR 163
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.132 0.391
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,928,293
Number of extensions: 104777
Number of successful extensions: 674
Number of sequences better than 10.0: 1
Number of HSP's gapped: 499
Number of HSP's successfully gapped: 240
Length of query: 131
Length of database: 6,701,793
Length adjustment: 83
Effective length of query: 48
Effective length of database: 4,384,350
Effective search space: 210448800
Effective search space used: 210448800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (23.6 bits)