BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy16796
MIASQERQQRSYFIPSSIMIQLFCNKTIEEEEEEEEEEEEEKEEEEEEEEENTRTEEMNE
RKENINKKKEEEKKNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER
QSDCKYYVAKEEEEGEDEEEEEEGEEEAKEQEQKQVGVIEKEKNKE

High Scoring Gene Products

Symbol, full name Information P value
pb
proboscipedia 		protein from Drosophila melanogaster 7.8e-19
hoxa2b
homeo box A2b 		gene_product from Danio rerio 1.5e-17
Hoxb2
homeobox B2 		gene from Rattus norvegicus 1.6e-17
HOXB2
Uncharacterized protein 		protein from Canis lupus familiaris 2.4e-17
LOC100521989
Uncharacterized protein 		protein from Sus scrofa 2.9e-17
HOXB2
Uncharacterized protein 		protein from Bos taurus 2.9e-17
HOXB2
Homeobox protein Hox-B2 		protein from Homo sapiens 3.0e-17
HOXA2
Homeobox protein Hox-A2 		protein from Bos taurus 3.8e-17
HOXA2
Homeobox protein Hox-A2 		protein from Bos taurus 3.8e-17
Hoxa2
homeobox A2 		protein from Mus musculus 3.8e-17
Hoxa2
homeo box A2 		gene from Rattus norvegicus 3.8e-17
Hoxa2
Homeobox protein Hox-A2 		protein from Rattus norvegicus 3.8e-17
Hoxb2
homeobox B2 		protein from Mus musculus 3.9e-17
HOXA2
Uncharacterized protein 		protein from Canis lupus familiaris 3.9e-17
HOXA2
Homeobox protein Hox-A2 		protein from Gallus gallus 3.9e-17
HOXA2
Homeobox protein Hox-A2 		protein from Homo sapiens 4.0e-17
LOC100519993
Uncharacterized protein 		protein from Sus scrofa 4.1e-17
HOXB2
Uncharacterized protein 		protein from Canis lupus familiaris 6.7e-17
hoxb2a
homeo box B2a 		gene_product from Danio rerio 7.1e-17
hoxd3a
homeo box D3a 		gene_product from Danio rerio 6.3e-13
HOXD3
Homeobox protein Hox-A3 		protein from Gallus gallus 6.7e-13
HOXD3
Uncharacterized protein 		protein from Canis lupus familiaris 7.4e-13
HOXD3
Homeobox protein Hox-D3 		protein from Homo sapiens 7.4e-13
Hoxd3
homeobox D3 		protein from Mus musculus 7.5e-13
HOXD3
Uncharacterized protein 		protein from Bos taurus 7.5e-13
HOXD3
Uncharacterized protein 		protein from Sus scrofa 7.6e-13
hoxa3a
homeo box A3a 		gene_product from Danio rerio 1.1e-12
HOXB3
Homeobox protein Hox-B3 		protein from Homo sapiens 1.1e-12
HOXA3
Homeobox protein Hox-A3 		protein from Gallus gallus 1.1e-12
HOXB3
cDNA FLJ51054, highly similar to Homeobox protein Hox-B3 		protein from Homo sapiens 1.1e-12
HOXA3
Homeobox protein Hox-A3 		protein from Bos taurus 1.3e-12
HOXA3
Uncharacterized protein 		protein from Canis lupus familiaris 1.3e-12
HOXA3
Homeobox protein Hox-A3 		protein from Homo sapiens 1.3e-12
HOXA3
Uncharacterized protein 		protein from Sus scrofa 1.3e-12
Hoxa3
homeobox A3 		protein from Mus musculus 1.3e-12
Hoxa3
homeobox A3 		gene from Rattus norvegicus 1.3e-12
Hoxb1
homeobox B1 		protein from Mus musculus 1.4e-12
HOXB3
Homeobox protein Hox-B3 		protein from Homo sapiens 2.1e-12
HOXB3
Homeobox protein Hox-B3 		protein from Gallus gallus 2.4e-12
HOXB3
Uncharacterized protein 		protein from Canis lupus familiaris 2.7e-12
HOXB3
Homeobox protein Hox-B3 		protein from Gallus gallus 2.8e-12
hoxb3a
homeo box B3a 		gene_product from Danio rerio 3.1e-12
HOXB3
Uncharacterized protein 		protein from Bos taurus 3.3e-12
Hoxb3
homeo box B3 		gene from Rattus norvegicus 3.3e-12
HOXB3
Homeobox protein Hox-B3 		protein from Homo sapiens 3.3e-12
Hoxb3
homeobox B3 		protein from Mus musculus 3.4e-12
HOXB1
Homeobox protein Hox-B1 		protein from Homo sapiens 3.9e-12
HOXD4
Homeobox protein Hox-D4 		protein from Gallus gallus 5.0e-12
HOXD4
Homeobox protein Hox-D4 		protein from Gallus gallus 5.0e-12
HOXA4
Uncharacterized protein 		protein from Bos taurus 5.0e-12
HOXA4
Homeobox protein Hox-A4 		protein from Homo sapiens 5.0e-12
Hoxd4
homeobox D4 		protein from Mus musculus 5.0e-12
Hoxd4
homeo box D4 		gene from Rattus norvegicus 5.0e-12
LOC100360577
homeobox A4-like 		gene from Rattus norvegicus 5.0e-12
HOXD4
Uncharacterized protein 		protein from Canis lupus familiaris 5.1e-12
HOXD4
Homeobox protein Hox-D4 		protein from Homo sapiens 5.3e-12
LOC100515690
Uncharacterized protein 		protein from Sus scrofa 5.6e-12
HOXD4
HOXD4 protein 		protein from Bos taurus 5.7e-12
HOXB4
Homeobox protein Hox-B4 		protein from Gallus gallus 6.4e-12
hoxa4a
homeo box A4a 		gene_product from Danio rerio 6.4e-12
HOXC4
Uncharacterized protein 		protein from Bos taurus 6.6e-12
HOXC4
Uncharacterized protein 		protein from Canis lupus familiaris 6.6e-12
HOXC4
Homeobox protein Hox-C4 		protein from Homo sapiens 6.6e-12
LOC100154759
Uncharacterized protein 		protein from Sus scrofa 6.6e-12
Hoxc4
homeobox C4 		protein from Mus musculus 6.6e-12
Hoxa4
homeobox A4 		protein from Mus musculus 9.8e-12
hoxd4a
homeo box D4a 		gene_product from Danio rerio 1.3e-11
hoxb4a
homeo box B4a 		gene_product from Danio rerio 1.3e-11
HOXA4
Homeobox protein Hox-A4 		protein from Gallus gallus 1.3e-11
Hoxb4
homeobox B4 		protein from Mus musculus 1.4e-11
Hoxb4
homeo box B4 		gene from Rattus norvegicus 1.4e-11
HOXB4
Homeobox protein Hox-B4 		protein from Bos taurus 1.4e-11
HOXB4
Homeobox protein Hox-B4 		protein from Bos taurus 1.4e-11
HOXB4
Uncharacterized protein 		protein from Canis lupus familiaris 1.4e-11
HOXB4
Homeobox protein Hox-B4 		protein from Homo sapiens 1.4e-11
LOC100522341
Uncharacterized protein 		protein from Sus scrofa 1.4e-11
HOXA4
Uncharacterized protein 		protein from Canis lupus familiaris 1.5e-11
HOXA4
Uncharacterized protein 		protein from Bos taurus 1.5e-11
HOXA4
Homeobox protein Hox-A4 		protein from Homo sapiens 1.5e-11
hoxc4a
homeo box C4a 		gene_product from Danio rerio 1.6e-11
LOC100519635
Uncharacterized protein 		protein from Sus scrofa 1.6e-11
PDX1
Uncharacterized protein 		protein from Gallus gallus 2.2e-11
pdx1
pancreatic and duodenal homeobox 1 		gene_product from Danio rerio 2.2e-11
HOXB4
Uncharacterized protein 		protein from Canis lupus familiaris 2.4e-11
Hoxd3
homeo box D3 		gene from Rattus norvegicus 2.8e-11
Hoxd3
Homeobox protein Hox-D3 		protein from Rattus norvegicus 2.8e-11
HOXB3
Uncharacterized protein 		protein from Sus scrofa 3.2e-11
PDX1
Uncharacterized protein 		protein from Canis lupus familiaris 4.6e-11
PDX1
Pancreas/duodenum homeobox protein 1 		protein from Homo sapiens 4.6e-11
F1RSV7
Uncharacterized protein 		protein from Sus scrofa 4.6e-11
Pdx1
pancreatic and duodenal homeobox 1 		gene from Rattus norvegicus 4.6e-11
PDX1
Uncharacterized protein 		protein from Sus scrofa 4.7e-11
Pdx1
pancreatic and duodenal homeobox 1 		protein from Mus musculus 4.7e-11
PDX1
Pyruvate dehydrogenase protein X component 		protein from Bos taurus 4.8e-11

The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy16796
        (166 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0051481 - symbol:pb "proboscipedia" species:7227 "...   237  7.8e-19   1
ZFIN|ZDB-GENE-990415-98 - symbol:hoxa2b "homeo box A2b" s...   217  1.5e-17   1
RGD|2319509 - symbol:Hoxb2 "homeobox B2" species:10116 "R...   214  1.6e-17   1
UNIPROTKB|F6UWJ9 - symbol:HOXB2 "Uncharacterized protein"...   214  2.4e-17   1
UNIPROTKB|F1RWG7 - symbol:HOXB2 "Uncharacterized protein"...   214  2.9e-17   1
UNIPROTKB|E1BGM6 - symbol:HOXB2 "Uncharacterized protein"...   214  2.9e-17   1
UNIPROTKB|P14652 - symbol:HOXB2 "Homeobox protein Hox-B2"...   214  3.0e-17   1
UNIPROTKB|F1MD21 - symbol:HOXA2 "Homeobox protein Hox-A2"...   214  3.8e-17   1
UNIPROTKB|Q0VCS4 - symbol:HOXA2 "Homeobox protein Hox-A2"...   214  3.8e-17   1
MGI|MGI:96174 - symbol:Hoxa2 "homeobox A2" species:10090 ...   214  3.8e-17   1
RGD|2813 - symbol:Hoxa2 "homeo box A2" species:10116 "Rat...   214  3.8e-17   1
UNIPROTKB|P31246 - symbol:Hoxa2 "Homeobox protein Hox-A2"...   214  3.8e-17   1
MGI|MGI:96183 - symbol:Hoxb2 "homeobox B2" species:10090 ...   213  3.9e-17   1
UNIPROTKB|E2R5Y1 - symbol:HOXA2 "Uncharacterized protein"...   214  3.9e-17   1
UNIPROTKB|Q08727 - symbol:HOXA2 "Homeobox protein Hox-A2"...   214  3.9e-17   1
UNIPROTKB|D4A426 - symbol:100365058 "Homeo box B2 (Predic...   213  3.9e-17   1
UNIPROTKB|O43364 - symbol:HOXA2 "Homeobox protein Hox-A2"...   214  4.0e-17   1
UNIPROTKB|F1SHT0 - symbol:HOXA2 "Uncharacterized protein"...   214  4.1e-17   1
UNIPROTKB|E2QT60 - symbol:HOXB2 "Uncharacterized protein"...   208  6.7e-17   1
ZFIN|ZDB-GENE-990415-103 - symbol:hoxb2a "homeo box B2a" ...   213  7.1e-17   1
ZFIN|ZDB-GENE-990415-120 - symbol:hoxd3a "homeo box D3a" ...   177  6.3e-13   1
UNIPROTKB|E1BZG3 - symbol:HOXD3 "Uncharacterized protein"...   177  6.7e-13   1
UNIPROTKB|E2RGV4 - symbol:HOXD3 "Uncharacterized protein"...   177  7.4e-13   1
UNIPROTKB|P31249 - symbol:HOXD3 "Homeobox protein Hox-D3"...   177  7.4e-13   1
MGI|MGI:96207 - symbol:Hoxd3 "homeobox D3" species:10090 ...   177  7.5e-13   1
UNIPROTKB|E1B856 - symbol:HOXD3 "Uncharacterized protein"...   177  7.5e-13   1
UNIPROTKB|F1RZF9 - symbol:HOXD3 "Uncharacterized protein"...   177  7.6e-13   1
ZFIN|ZDB-GENE-000823-3 - symbol:hoxa3a "homeo box A3a" sp...   175  1.1e-12   1
UNIPROTKB|F8VXG0 - symbol:HOXB3 "Homeobox protein Hox-B3"...   171  1.1e-12   1
UNIPROTKB|O93353 - symbol:HOXA3 "Homeobox protein Hox-A3"...   175  1.1e-12   1
UNIPROTKB|B7Z5N8 - symbol:HOXB3 "cDNA FLJ51054, highly si...   171  1.1e-12   1
UNIPROTKB|Q08DG7 - symbol:HOXA3 "Homeobox protein Hox-A3"...   175  1.3e-12   1
UNIPROTKB|J9NWE8 - symbol:HOXA3 "Uncharacterized protein"...   175  1.3e-12   1
UNIPROTKB|O43365 - symbol:HOXA3 "Homeobox protein Hox-A3"...   175  1.3e-12   1
UNIPROTKB|F1SHT1 - symbol:HOXA3 "Uncharacterized protein"...   175  1.3e-12   1
MGI|MGI:96175 - symbol:Hoxa3 "homeobox A3" species:10090 ...   175  1.3e-12   1
RGD|1561431 - symbol:Hoxa3 "homeobox A3" species:10116 "R...   175  1.3e-12   1
MGI|MGI:96182 - symbol:Hoxb1 "homeobox B1" species:10090 ...   154  1.4e-12   2
UNIPROTKB|B7ZAD0 - symbol:HOXB3 "cDNA, FLJ79144, highly s...   171  2.1e-12   1
UNIPROTKB|F1NH10 - symbol:HOXB3 "Homeobox protein Hox-B3"...   171  2.4e-12   1
UNIPROTKB|J9NW05 - symbol:HOXB3 "Uncharacterized protein"...   172  2.7e-12   1
UNIPROTKB|P23682 - symbol:HOXB3 "Homeobox protein Hox-B3"...   171  2.8e-12   1
ZFIN|ZDB-GENE-990415-104 - symbol:hoxb3a "homeo box B3a" ...   171  3.1e-12   1
UNIPROTKB|A5PKI4 - symbol:HOXB3 "HOXB3 protein" species:9...   171  3.3e-12   1
RGD|1310780 - symbol:Hoxb3 "homeo box B3" species:10116 "...   171  3.3e-12   1
UNIPROTKB|P14651 - symbol:HOXB3 "Homeobox protein Hox-B3"...   171  3.3e-12   1
MGI|MGI:96184 - symbol:Hoxb3 "homeobox B3" species:10090 ...   171  3.4e-12   1
UNIPROTKB|G3V737 - symbol:Hoxb1 "Homeo box B1 (Predicted)...   154  3.6e-12   2
UNIPROTKB|P14653 - symbol:HOXB1 "Homeobox protein Hox-B1"...   154  3.9e-12   2
UNIPROTKB|F1NZJ3 - symbol:HOXD4 "Homeobox protein Hox-D4"...   162  5.0e-12   1
UNIPROTKB|P17278 - symbol:HOXD4 "Homeobox protein Hox-D4"...   162  5.0e-12   1
UNIPROTKB|F1MJX6 - symbol:HOXA4 "Uncharacterized protein"...   162  5.0e-12   1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"...   162  5.0e-12   1
MGI|MGI:96208 - symbol:Hoxd4 "homeobox D4" species:10090 ...   162  5.0e-12   1
RGD|1309690 - symbol:Hoxd4 "homeo box D4" species:10116 "...   162  5.0e-12   1
RGD|2321880 - symbol:LOC100360577 "homeobox A4-like" spec...   162  5.0e-12   1
UNIPROTKB|E2RGY0 - symbol:HOXD4 "Uncharacterized protein"...   162  5.1e-12   1
UNIPROTKB|P09016 - symbol:HOXD4 "Homeobox protein Hox-D4"...   162  5.3e-12   1
UNIPROTKB|F1RZG0 - symbol:HOXD4 "Uncharacterized protein"...   162  5.6e-12   1
UNIPROTKB|A7MBD6 - symbol:HOXD4 "Uncharacterized protein"...   162  5.7e-12   1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot...   161  6.4e-12   1
UNIPROTKB|P14840 - symbol:HOXB4 "Homeobox protein Hox-B4"...   161  6.4e-12   1
ZFIN|ZDB-GENE-000823-4 - symbol:hoxa4a "homeo box A4a" sp...   161  6.4e-12   1
UNIPROTKB|A4FUC1 - symbol:HOXC4 "HOXC4 protein" species:9...   162  6.6e-12   1
UNIPROTKB|E2QSM9 - symbol:HOXC4 "Uncharacterized protein"...   162  6.6e-12   1
UNIPROTKB|P09017 - symbol:HOXC4 "Homeobox protein Hox-C4"...   162  6.6e-12   1
UNIPROTKB|F1SR58 - symbol:HOXC4 "Uncharacterized protein"...   162  6.6e-12   1
MGI|MGI:96195 - symbol:Hoxc4 "homeobox C4" species:10090 ...   162  6.6e-12   1
MGI|MGI:96176 - symbol:Hoxa4 "homeobox A4" species:10090 ...   162  9.8e-12   1
UNIPROTKB|E9PT77 - symbol:LOC100360577 "Protein LOC100360...   162  9.8e-12   1
ZFIN|ZDB-GENE-980526-214 - symbol:hoxd4a "homeo box D4a" ...   159  1.3e-11   1
ZFIN|ZDB-GENE-990415-105 - symbol:hoxb4a "homeo box B4a" ...   158  1.3e-11   1
UNIPROTKB|F1NMG4 - symbol:LOC100858374 "Uncharacterized p...   162  1.3e-11   1
UNIPROTKB|P17277 - symbol:HOXA4 "Homeobox protein Hox-A4"...   162  1.3e-11   1
MGI|MGI:96185 - symbol:Hoxb4 "homeobox B4" species:10090 ...   158  1.4e-11   1
RGD|1560113 - symbol:Hoxb4 "homeo box B4" species:10116 "...   158  1.4e-11   1
UNIPROTKB|F1N257 - symbol:HOXB4 "Homeobox protein Hox-B4"...   158  1.4e-11   1
UNIPROTKB|Q08DG5 - symbol:HOXB4 "Homeobox protein Hox-B4"...   158  1.4e-11   1
UNIPROTKB|F6UWC1 - symbol:HOXB4 "Uncharacterized protein"...   158  1.4e-11   1
UNIPROTKB|P17483 - symbol:HOXB4 "Homeobox protein Hox-B4"...   158  1.4e-11   1
UNIPROTKB|F1RWG5 - symbol:HOXB4 "Uncharacterized protein"...   158  1.4e-11   1
UNIPROTKB|F1PZZ7 - symbol:HOXA4 "Uncharacterized protein"...   162  1.5e-11   1
UNIPROTKB|G3MXN5 - symbol:HOXA4 "Uncharacterized protein"...   162  1.5e-11   1
UNIPROTKB|Q00056 - symbol:HOXA4 "Homeobox protein Hox-A4"...   162  1.5e-11   1
ZFIN|ZDB-GENE-990415-112 - symbol:hoxc4a "homeo box C4a" ...   159  1.6e-11   1
UNIPROTKB|F1SHT2 - symbol:HOXA4 "Uncharacterized protein"...   162  1.6e-11   1
UNIPROTKB|E1C2J1 - symbol:PDX1 "Uncharacterized protein" ...   156  2.2e-11   1
ZFIN|ZDB-GENE-990415-122 - symbol:pdx1 "pancreatic and du...   156  2.2e-11   1
UNIPROTKB|E2QT52 - symbol:HOXB4 "Uncharacterized protein"...   158  2.4e-11   1
RGD|1588601 - symbol:Hoxd3 "homeo box D3" species:10116 "...   155  2.8e-11   1
UNIPROTKB|P18867 - symbol:Hoxd3 "Homeobox protein Hox-D3"...   155  2.8e-11   1
UNIPROTKB|F1RWG6 - symbol:HOXB3 "Uncharacterized protein"...   162  3.2e-11   1
UNIPROTKB|F6VFN9 - symbol:HOXB1 "Homeobox protein Hox-B1"...   154  3.5e-11   1
UNIPROTKB|E2RI92 - symbol:PDX1 "Pancreatic and duodenum h...   156  4.6e-11   1
UNIPROTKB|P52945 - symbol:PDX1 "Pancreas/duodenum homeobo...   156  4.6e-11   1
UNIPROTKB|F1RSV7 - symbol:F1RSV7 "Uncharacterized protein...   156  4.6e-11   1
RGD|62387 - symbol:Pdx1 "pancreatic and duodenal homeobox...   156  4.6e-11   1
UNIPROTKB|F1RSW4 - symbol:PDX1 "Uncharacterized protein" ...   156  4.7e-11   1
MGI|MGI:102851 - symbol:Pdx1 "pancreatic and duodenal hom...   156  4.7e-11   1
UNIPROTKB|E1BBQ5 - symbol:PDX1 "Uncharacterized protein" ...   156  4.8e-11   1

WARNING:  Descriptions of 665 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0051481 [details] [associations]
            symbol:pb "proboscipedia" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS;NAS] [GO:0007381
            "specification of segmental identity, labial segment"
            evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
            maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
            eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
            EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
            EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
            RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
            ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
            EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
            UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
            GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
            OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
            NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
            Uniprot:P31264
        Length = 782

 Score = 237 (88.5 bits), Expect = 7.8e-19, P = 7.8e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ
Sbjct:   196 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 241


>ZFIN|ZDB-GENE-990415-98 [details] [associations]
            symbol:hoxa2b "homeo box A2b" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-98 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            eggNOG:NOG321520 KO:K09302 EMBL:AF307010 EMBL:AL645795
            EMBL:DQ060536 EMBL:Y13945 IPI:IPI00486776 RefSeq:NP_571181.1
            UniGene:Dr.82597 ProteinModelPortal:O42365 SMR:O42365 STRING:O42365
            GeneID:30325 KEGG:dre:30325 CTD:30325 HOGENOM:HOG000063664
            HOVERGEN:HBG006088 InParanoid:O42365 OrthoDB:EOG43TZVT
            NextBio:20806759 ArrayExpress:O42365 Uniprot:O42365
        Length = 363

 Score = 217 (81.4 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   131 GATRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 176


>RGD|2319509 [details] [associations]
            symbol:Hoxb2 "homeobox B2" species:10116 "Rattus norvegicus"
            [GO:0002011 "morphogenesis of an epithelial sheet" evidence=ISO]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=ISO] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
            [GO:0021570 "rhombomere 4 development" evidence=ISO] [GO:0021612
            "facial nerve structural organization" evidence=ISO] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=ISO] [GO:0048705
            "skeletal system morphogenesis" evidence=ISO] [GO:0048857 "neural
            nucleus development" evidence=ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:2319509 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 KO:K09302 CTD:3212 UniGene:Rn.231109
            GeneID:100361765 KEGG:rno:100361765 EMBL:DQ399532 IPI:IPI00370818
            RefSeq:NP_001040556.1 ProteinModelPortal:Q20A34 SMR:Q20A34
            NextBio:651428 Genevestigator:Q20A34 Uniprot:Q20A34
        Length = 305

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   125 GGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 170


>UNIPROTKB|F6UWJ9 [details] [associations]
            symbol:HOXB2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104446 KO:K09302 CTD:3212 OMA:RAAWEAC
            Ensembl:ENSCAFT00000026663 EMBL:AAEX03006513 RefSeq:XP_851108.1
            GeneID:608880 KEGG:cfa:608880 Uniprot:F6UWJ9
        Length = 342

 Score = 214 (80.4 bits), Expect = 2.4e-17, P = 2.4e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   137 GGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 182


>UNIPROTKB|F1RWG7 [details] [associations]
            symbol:HOXB2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048857 "neural
            nucleus development" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0021612 "facial nerve
            structural organization" evidence=IEA] [GO:0021570 "rhombomere 4
            development" evidence=IEA] [GO:0021569 "rhombomere 3 development"
            evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0002011 "morphogenesis of an
            epithelial sheet" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704 GO:GO:0002011
            GO:GO:0021612 GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569
            GO:GO:0021570 OMA:RAAWEAC GO:GO:0048857 EMBL:CU856160
            RefSeq:XP_003131594.1 Ensembl:ENSSSCT00000019087 GeneID:100521989
            KEGG:ssc:100521989 Uniprot:F1RWG7
        Length = 353

 Score = 214 (80.4 bits), Expect = 2.9e-17, P = 2.9e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   139 GGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 184


>UNIPROTKB|E1BGM6 [details] [associations]
            symbol:HOXB2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048857 "neural
            nucleus development" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0021612 "facial nerve
            structural organization" evidence=IEA] [GO:0021570 "rhombomere 4
            development" evidence=IEA] [GO:0021569 "rhombomere 3 development"
            evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0002011 "morphogenesis of an
            epithelial sheet" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704 GO:GO:0002011
            GO:GO:0021612 GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569
            GO:GO:0021570 CTD:3212 OMA:RAAWEAC GO:GO:0048857 EMBL:DAAA02049068
            IPI:IPI00706154 RefSeq:NP_001178264.1 UniGene:Bt.17183
            Ensembl:ENSBTAT00000013159 GeneID:616129 KEGG:bta:616129
            NextBio:20899975 Uniprot:E1BGM6
        Length = 354

 Score = 214 (80.4 bits), Expect = 2.9e-17, P = 2.9e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   138 GGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 183


>UNIPROTKB|P14652 [details] [associations]
            symbol:HOXB2 "Homeobox protein Hox-B2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
            formation" evidence=IEA] [GO:0021569 "rhombomere 3 development"
            evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
            [GO:0021612 "facial nerve structural organization" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0048857 "neural nucleus development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=TAS] [GO:0008015 "blood circulation"
            evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008015 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704
            GO:GO:0002011 GO:GO:0021612 KO:K09302 GO:GO:0021569 GO:GO:0021570
            HOGENOM:HOG000063664 HOVERGEN:HBG006088 EMBL:X16665 EMBL:BC074805
            EMBL:BC074806 EMBL:X16176 EMBL:X14571 EMBL:X78978 IPI:IPI00027261
            PIR:S07542 RefSeq:NP_002136.1 UniGene:Hs.514289
            ProteinModelPortal:P14652 SMR:P14652 IntAct:P14652 STRING:P14652
            PhosphoSite:P14652 DMDM:123270 PRIDE:P14652 DNASU:3212
            Ensembl:ENST00000330070 GeneID:3212 KEGG:hsa:3212 UCSC:uc002inm.3
            CTD:3212 GeneCards:GC17M046620 HGNC:HGNC:5113 MIM:142967
            neXtProt:NX_P14652 PharmGKB:PA29389 eggNOG:NOG295272
            InParanoid:P14652 OMA:RAAWEAC OrthoDB:EOG4QC167 PhylomeDB:P14652
            GenomeRNAi:3212 NextBio:12780 ArrayExpress:P14652 Bgee:P14652
            CleanEx:HS_HOXB2 Genevestigator:P14652 GermOnline:ENSG00000173917
            GO:GO:0048857 Uniprot:P14652
        Length = 356

 Score = 214 (80.4 bits), Expect = 3.0e-17, P = 3.0e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   141 GGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 186


>UNIPROTKB|F1MD21 [details] [associations]
            symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
            evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
            [GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
            "rhombomere 2 development" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
            "segment specification" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001709 "cell fate determination"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
            GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
            GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
            GeneTree:ENSGT00700000104446 IPI:IPI00689409 UniGene:Bt.111374
            OMA:NCGSGLN GO:GO:0021658 EMBL:DAAA02010939
            Ensembl:ENSBTAT00000010699 Uniprot:F1MD21
        Length = 372

 Score = 214 (80.4 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   137 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 182


>UNIPROTKB|Q0VCS4 [details] [associations]
            symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            eggNOG:NOG321520 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
            OrthoDB:EOG43TZVT EMBL:BC120030 IPI:IPI00689409
            RefSeq:NP_001069322.1 UniGene:Bt.111374 ProteinModelPortal:Q0VCS4
            SMR:Q0VCS4 PRIDE:Q0VCS4 GeneID:524150 KEGG:bta:524150 CTD:3199
            InParanoid:Q0VCS4 NextBio:20873901 Uniprot:Q0VCS4
        Length = 372

 Score = 214 (80.4 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   137 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 182


>MGI|MGI:96174 [details] [associations]
            symbol:Hoxa2 "homeobox A2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0001709 "cell fate
            determination" evidence=IMP] [GO:0002076 "osteoblast development"
            evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007379 "segment specification" evidence=IMP] [GO:0007389
            "pattern specification process" evidence=IMP] [GO:0008045 "motor
            neuron axon guidance" evidence=IMP] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IMP] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=IGI;IMP] [GO:0021568 "rhombomere 2
            development" evidence=IMP] [GO:0021569 "rhombomere 3 development"
            evidence=IGI] [GO:0021658 "rhombomere 3 morphogenesis"
            evidence=IMP] [GO:0035284 "brain segmentation" evidence=IMP]
            [GO:0042474 "middle ear morphogenesis" evidence=IGI;IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045165 "cell fate commitment" evidence=IMP] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IGI;IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IMP] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IGI] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:96174 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
            GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520
            GO:GO:0035284 GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
            GeneTree:ENSGT00700000104446 KO:K09302 HOGENOM:HOG000063664
            HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 OMA:NCGSGLN
            GO:GO:0021658 EMBL:M95599 EMBL:M93148 EMBL:M93292 EMBL:BC117105
            EMBL:BC117107 EMBL:M87801 EMBL:AB039191 IPI:IPI00132242 PIR:A42694
            PIR:A46037 RefSeq:NP_034581.1 UniGene:Mm.131
            ProteinModelPortal:P31245 SMR:P31245 IntAct:P31245 STRING:P31245
            PhosphoSite:P31245 PRIDE:P31245 Ensembl:ENSMUST00000014848
            GeneID:15399 KEGG:mmu:15399 UCSC:uc009bxz.1 InParanoid:P31245
            NextBio:288090 Bgee:P31245 CleanEx:MM_HOXA2 Genevestigator:P31245
            GermOnline:ENSMUSG00000014704 Uniprot:P31245
        Length = 372

 Score = 214 (80.4 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   137 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 182


>RGD|2813 [details] [associations]
            symbol:Hoxa2 "homeo box A2" species:10116 "Rattus norvegicus"
          [GO:0000122 "negative regulation of transcription from RNA polymerase
          II promoter" evidence=ISO] [GO:0001709 "cell fate determination"
          evidence=ISO] [GO:0002076 "osteoblast development" evidence=ISO]
          [GO:0003700 "sequence-specific DNA binding transcription factor
          activity" evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA;ISO]
          [GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007275
          "multicellular organismal development" evidence=IEA] [GO:0007379
          "segment specification" evidence=ISO] [GO:0007389 "pattern
          specification process" evidence=ISO] [GO:0008045 "motor neuron axon
          guidance" evidence=ISO] [GO:0009952 "anterior/posterior pattern
          specification" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
          formation" evidence=ISO] [GO:0021568 "rhombomere 2 development"
          evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
          [GO:0021658 "rhombomere 3 morphogenesis" evidence=ISO] [GO:0035284
          "brain segmentation" evidence=ISO] [GO:0042474 "middle ear
          morphogenesis" evidence=ISO] [GO:0043565 "sequence-specific DNA
          binding" evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
          evidence=ISO] [GO:0045665 "negative regulation of neuron
          differentiation" evidence=ISO] [GO:0045944 "positive regulation of
          transcription from RNA polymerase II promoter" evidence=ISO]
          [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISO]
          [GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
          [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001356
          InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
          PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
          RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
          GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
          InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
          GO:GO:0008045 GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
          eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
          GO:GO:0021568 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
          OrthoDB:EOG43TZVT CTD:3199 GO:GO:0021658 EMBL:M91802 IPI:IPI00210902
          PIR:I52196 RefSeq:NP_036713.2 UniGene:Rn.91077
          ProteinModelPortal:P31246 SMR:P31246 STRING:P31246 GeneID:24452
          KEGG:rno:24452 UCSC:RGD:2813 InParanoid:P31246 NextBio:603363
          Genevestigator:P31246 GermOnline:ENSRNOG00000005968 Uniprot:P31246
        Length = 372

 Score = 214 (80.4 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   137 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 182


>UNIPROTKB|P31246 [details] [associations]
            symbol:Hoxa2 "Homeobox protein Hox-A2" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0008045 GO:GO:0002076 GO:GO:0007379
            GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520 GO:GO:0035284
            GO:GO:0048703 GO:GO:0042474 GO:GO:0021568 KO:K09302
            HOGENOM:HOG000063664 HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199
            GO:GO:0021658 EMBL:M91802 IPI:IPI00210902 PIR:I52196
            RefSeq:NP_036713.2 UniGene:Rn.91077 ProteinModelPortal:P31246
            SMR:P31246 STRING:P31246 GeneID:24452 KEGG:rno:24452 UCSC:RGD:2813
            InParanoid:P31246 NextBio:603363 Genevestigator:P31246
            GermOnline:ENSRNOG00000005968 Uniprot:P31246
        Length = 372

 Score = 214 (80.4 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   137 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 182


>MGI|MGI:96183 [details] [associations]
            symbol:Hoxb2 "homeobox B2" species:10090 "Mus musculus"
            [GO:0002011 "morphogenesis of an epithelial sheet" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IGI] [GO:0021569 "rhombomere 3 development" evidence=IGI]
            [GO:0021570 "rhombomere 4 development" evidence=IGI] [GO:0021612
            "facial nerve structural organization" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IGI] [GO:0048705
            "skeletal system morphogenesis" evidence=IGI;IMP] [GO:0048857
            "neural nucleus development" evidence=IMP] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:96183 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953
            GO:GO:0048704 GO:GO:0002011 GO:GO:0021612
            GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
            HOGENOM:HOG000063664 HOVERGEN:HBG006088 CTD:3212 eggNOG:NOG295272
            OMA:RAAWEAC OrthoDB:EOG4QC167 GO:GO:0048857 EMBL:AL606824
            EMBL:BC138494 EMBL:BC138495 IPI:IPI00124385 RefSeq:NP_598793.2
            UniGene:Mm.281153 ProteinModelPortal:P0C1T1 SMR:P0C1T1
            STRING:P0C1T1 PhosphoSite:P0C1T1 PRIDE:P0C1T1
            Ensembl:ENSMUST00000100523 GeneID:103889 KEGG:mmu:103889
            UCSC:uc007lby.1 InParanoid:P0C1T1 NextBio:356175 Bgee:P0C1T1
            CleanEx:MM_HOXB2 Genevestigator:P0C1T1 Uniprot:P0C1T1
        Length = 354

 Score = 213 (80.0 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 41/43 (95%), Positives = 42/43 (97%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   142 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 184


>UNIPROTKB|E2R5Y1 [details] [associations]
            symbol:HOXA2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703
            "embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
            evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
            [GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
            "rhombomere 2 development" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
            "segment specification" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001709 "cell fate determination"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
            GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
            GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
            GeneTree:ENSGT00700000104446 KO:K09302 CTD:3199 OMA:NCGSGLN
            GO:GO:0021658 EMBL:AAEX03009390 RefSeq:XP_851905.1
            Ensembl:ENSCAFT00000004713 GeneID:609592 KEGG:cfa:609592
            NextBio:20895182 Uniprot:E2R5Y1
        Length = 374

 Score = 214 (80.4 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   139 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 184


>UNIPROTKB|Q08727 [details] [associations]
            symbol:HOXA2 "Homeobox protein Hox-A2" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09302
            HOVERGEN:HBG006088 CTD:3199 EMBL:X74323 IPI:IPI00584066 PIR:I50589
            PIR:S35941 RefSeq:NP_990481.1 UniGene:Gga.524
            ProteinModelPortal:Q08727 SMR:Q08727 GeneID:396055 KEGG:gga:396055
            NextBio:20816115 Uniprot:Q08727
        Length = 375

 Score = 214 (80.4 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   138 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 183


>UNIPROTKB|D4A426 [details] [associations]
            symbol:100365058 "Homeo box B2 (Predicted)" species:10116
            "Rattus norvegicus" [GO:0002011 "morphogenesis of an epithelial
            sheet" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
            formation" evidence=IEA] [GO:0021569 "rhombomere 3 development"
            evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
            [GO:0021612 "facial nerve structural organization" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0048857 "neural nucleus development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704
            EMBL:CH473948 GO:GO:0002011 GO:GO:0021612
            GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
            CTD:3212 OrthoDB:EOG4QC167 GO:GO:0048857 IPI:IPI00958412
            RefSeq:XP_002724587.1 RefSeq:XP_002727852.1 UniGene:Rn.231109
            Ensembl:ENSRNOT00000011213 GeneID:100361765 KEGG:rno:100361765
            UCSC:RGD:2319509 Uniprot:D4A426
        Length = 355

 Score = 213 (80.0 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 41/43 (95%), Positives = 42/43 (97%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   143 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 185


>UNIPROTKB|O43364 [details] [associations]
            symbol:HOXA2 "Homeobox protein Hox-A2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001709 "cell fate determination" evidence=IEA] [GO:0002076
            "osteoblast development" evidence=IEA] [GO:0007379 "segment
            specification" evidence=IEA] [GO:0008045 "motor neuron axon
            guidance" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
            formation" evidence=IEA] [GO:0021568 "rhombomere 2 development"
            evidence=IEA] [GO:0021658 "rhombomere 3 morphogenesis"
            evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
            [GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 EMBL:CH471073
            GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
            GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045
            GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
            eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
            GO:GO:0021568 KO:K09302 EMBL:AC004079 HOGENOM:HOG000063664
            HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 EMBL:BC130571
            EMBL:BC136500 IPI:IPI00012049 RefSeq:NP_006726.1 UniGene:Hs.445239
            UniGene:Hs.592177 ProteinModelPortal:O43364 SMR:O43364
            STRING:O43364 PhosphoSite:O43364 PRIDE:O43364
            Ensembl:ENST00000222718 GeneID:3199 KEGG:hsa:3199 UCSC:uc003syh.3
            GeneCards:GC07M027106 HGNC:HGNC:5103 HPA:HPA029774 MIM:604685
            MIM:612290 neXtProt:NX_O43364 Orphanet:93976 Orphanet:140963
            PharmGKB:PA29380 InParanoid:O43364 OMA:NCGSGLN PhylomeDB:O43364
            GenomeRNAi:3199 NextBio:12724 Bgee:O43364 CleanEx:HS_HOXA2
            Genevestigator:O43364 GermOnline:ENSG00000105996 GO:GO:0021658
            Uniprot:O43364
        Length = 376

 Score = 214 (80.4 bits), Expect = 4.0e-17, P = 4.0e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   141 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 186


>UNIPROTKB|F1SHT0 [details] [associations]
            symbol:HOXA2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
            evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
            [GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
            "rhombomere 2 development" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
            "segment specification" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001709 "cell fate determination"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
            GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
            GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
            GeneTree:ENSGT00700000104446 KO:K09302 OMA:NCGSGLN GO:GO:0021658
            EMBL:CU570959 RefSeq:XP_003134891.1 Ensembl:ENSSSCT00000018187
            GeneID:100519993 KEGG:ssc:100519993 Uniprot:F1SHT0
        Length = 380

 Score = 214 (80.4 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 42/46 (91%), Positives = 43/46 (93%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   145 GGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 190


>UNIPROTKB|E2QT60 [details] [associations]
            symbol:HOXB2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 Ensembl:ENSCAFT00000026663
            Uniprot:E2QT60
        Length = 310

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 40/42 (95%), Positives = 41/42 (97%)

Query:    80 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   133 RLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 174


>ZFIN|ZDB-GENE-990415-103 [details] [associations]
            symbol:hoxb2a "homeo box B2a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-103
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104446 EMBL:CR751227 IPI:IPI00491492
            Ensembl:ENSDART00000146636 ArrayExpress:F1QMG2 Bgee:F1QMG2
            Uniprot:F1QMG2
        Length = 409

 Score = 213 (80.0 bits), Expect = 7.1e-17, P = 7.1e-17
 Identities = 41/43 (95%), Positives = 42/43 (97%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RRLRTAYTNTQLLELEKEFHFNKYLCRPRR+EIAA LDLTERQ
Sbjct:   178 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 220


>ZFIN|ZDB-GENE-990415-120 [details] [associations]
            symbol:hoxd3a "homeo box D3a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-120
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
            EMBL:BX322661 Ensembl:ENSDART00000082359 Bgee:G8JL23 Uniprot:G8JL23
        Length = 403

 Score = 177 (67.4 bits), Expect = 6.3e-13, P = 6.3e-13
 Identities = 32/43 (74%), Positives = 40/43 (93%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   169 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 211


>UNIPROTKB|E1BZG3 [details] [associations]
            symbol:HOXD3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007219 "Notch
            signaling pathway" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0010628 "positive
            regulation of gene expression" evidence=IEA] [GO:0021615
            "glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007160
            GO:GO:0010628 GeneTree:ENSGT00700000104189 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 CTD:3232 OMA:PECTMQK
            EMBL:AADN02020018 IPI:IPI00588035 RefSeq:XP_428765.2
            Ensembl:ENSGALT00000038692 GeneID:431212 KEGG:gga:431212
            NextBio:20830712 Uniprot:E1BZG3
        Length = 413

 Score = 177 (67.4 bits), Expect = 6.7e-13, P = 6.7e-13
 Identities = 32/43 (74%), Positives = 40/43 (93%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   179 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 221


>UNIPROTKB|E2RGV4 [details] [associations]
            symbol:HOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0021615
            "glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0010628
            "positive regulation of gene expression" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007160
            "cell-matrix adhesion" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
            GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
            GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 CTD:3232 OMA:PECTMQK
            EMBL:AAEX03017792 RefSeq:XP_545539.2 Ensembl:ENSCAFT00000021350
            GeneID:488417 KEGG:cfa:488417 NextBio:20861770 Uniprot:E2RGV4
        Length = 431

 Score = 177 (67.4 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 32/43 (74%), Positives = 40/43 (93%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   194 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 236


>UNIPROTKB|P31249 [details] [associations]
            symbol:HOXD3 "Homeobox protein Hox-D3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IMP] [GO:0010628 "positive regulation of gene expression"
            evidence=IMP] [GO:0007160 "cell-matrix adhesion" evidence=IDA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=ISS] [GO:0030878 "thyroid gland development" evidence=ISS]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=ISS] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=ISS] [GO:0051216 "cartilage development" evidence=ISS]
            [GO:0006351 "transcription, DNA-dependent" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IC] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0007160 GO:GO:0045666
            GO:GO:0010628 GO:GO:0048704 GO:GO:0030878 EMBL:AC009336
            eggNOG:NOG284589 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 EMBL:D11117
            EMBL:Y09980 EMBL:BC005124 EMBL:BC008789 IPI:IPI00215882 PIR:S15548
            PIR:S27198 RefSeq:NP_008829.3 UniGene:Hs.93574
            ProteinModelPortal:P31249 SMR:P31249 IntAct:P31249 STRING:P31249
            PhosphoSite:P31249 DMDM:224471887 PRIDE:P31249 DNASU:3232
            Ensembl:ENST00000249440 Ensembl:ENST00000410016
            Ensembl:ENST00000468418 GeneID:3232 KEGG:hsa:3232 UCSC:uc002ukt.1
            CTD:3232 GeneCards:GC02P177001 HGNC:HGNC:5137 HPA:HPA051831
            MIM:142980 neXtProt:NX_P31249 PharmGKB:PA29411 InParanoid:P31249
            OMA:PECTMQK PhylomeDB:P31249 GenomeRNAi:3232 NextBio:12861
            ArrayExpress:P31249 Bgee:P31249 CleanEx:HS_HOXD3
            Genevestigator:P31249 GermOnline:ENSG00000128652 Uniprot:P31249
        Length = 432

 Score = 177 (67.4 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 32/43 (74%), Positives = 40/43 (93%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   195 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237


>MGI|MGI:96207 [details] [associations]
            symbol:Hoxd3 "homeobox D3" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=ISO] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007160 "cell-matrix adhesion" evidence=ISO] [GO:0007219 "Notch
            signaling pathway" evidence=ISO] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IGI;IMP]
            [GO:0010628 "positive regulation of gene expression" evidence=ISO]
            [GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
            [GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=IGI] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IGI;IMP]
            [GO:0051216 "cartilage development" evidence=IGI]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96207 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0007160 GO:GO:0045666
            GO:GO:0010628 GO:GO:0048704 GO:GO:0030878 eggNOG:NOG284589
            HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OrthoDB:EOG4S4PH1
            CTD:3232 OMA:PECTMQK EMBL:U03485 EMBL:U03496 EMBL:X73573
            EMBL:L24363 EMBL:U56400 EMBL:U56401 EMBL:AK138525 EMBL:M18169
            IPI:IPI00132385 PIR:D29585 PIR:S34164 PIR:S47539 RefSeq:NP_034598.2
            UniGene:Mm.430708 ProteinModelPortal:P09027 SMR:P09027
            STRING:P09027 PhosphoSite:P09027 PRIDE:P09027
            Ensembl:ENSMUST00000047830 Ensembl:ENSMUST00000053932
            Ensembl:ENSMUST00000111982 Ensembl:ENSMUST00000111983 GeneID:15434
            KEGG:mmu:15434 InParanoid:P09027 NextBio:288206 Bgee:P09027
            CleanEx:MM_HOXD3 Genevestigator:P09027
            GermOnline:ENSMUSG00000042464 Uniprot:P09027
        Length = 433

 Score = 177 (67.4 bits), Expect = 7.5e-13, P = 7.5e-13
 Identities = 32/43 (74%), Positives = 40/43 (93%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   196 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 238


>UNIPROTKB|E1B856 [details] [associations]
            symbol:HOXD3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA] [GO:0010628 "positive regulation of
            gene expression" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0007219 "Notch signaling
            pathway" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
            GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
            GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 CTD:3232 OMA:PECTMQK
            EMBL:DAAA02004173 IPI:IPI00709010 RefSeq:XP_002685351.1
            RefSeq:XP_002703632.1 UniGene:Bt.105461 Ensembl:ENSBTAT00000006353
            GeneID:100295744 KEGG:bta:100295744 Uniprot:E1B856
        Length = 434

 Score = 177 (67.4 bits), Expect = 7.5e-13, P = 7.5e-13
 Identities = 32/43 (74%), Positives = 40/43 (93%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   197 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 239


>UNIPROTKB|F1RZF9 [details] [associations]
            symbol:HOXD3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA] [GO:0010628 "positive regulation of
            gene expression" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0007219 "Notch signaling
            pathway" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
            GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
            GO:GO:0030878 GeneTree:ENSGT00700000104189 InterPro:IPR025281
            Pfam:PF13293 GO:GO:0021615 OMA:PECTMQK EMBL:CU570829
            Ensembl:ENSSSCT00000017406 Uniprot:F1RZF9
        Length = 435

 Score = 177 (67.4 bits), Expect = 7.6e-13, P = 7.6e-13
 Identities = 32/43 (74%), Positives = 40/43 (93%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   198 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 240


>ZFIN|ZDB-GENE-000823-3 [details] [associations]
            symbol:hoxa3a "homeo box A3a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IMP] [GO:0060017
            "parathyroid gland development" evidence=IMP] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-000823-3 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 eggNOG:NOG284589 EMBL:AL645756
            EMBL:CR382300 EMBL:AF071245 EMBL:BC076469 EMBL:DQ060532
            IPI:IPI00487095 RefSeq:NP_571609.1 UniGene:Dr.32618
            ProteinModelPortal:Q8AWZ2 SMR:Q8AWZ2 STRING:Q8AWZ2
            Ensembl:ENSDART00000052633 Ensembl:ENSDART00000146993 GeneID:58049
            KEGG:dre:58049 CTD:58049 HOGENOM:HOG000252944 HOVERGEN:HBG107984
            InParanoid:Q8AWZ2 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
            NextBio:20892313 ArrayExpress:Q8AWZ2 Bgee:Q8AWZ2 InterPro:IPR025281
            Pfam:PF13293 Uniprot:Q8AWZ2
        Length = 410

 Score = 175 (66.7 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   164 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 206


>UNIPROTKB|F8VXG0 [details] [associations]
            symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            InterPro:IPR025281 Pfam:PF13293 EMBL:AC103702 HGNC:HGNC:5114
            ChiTaRS:HOXB3 IPI:IPI01022378 ProteinModelPortal:F8VXG0 SMR:F8VXG0
            Ensembl:ENST00000490677 ArrayExpress:F8VXG0 Bgee:F8VXG0
            Uniprot:F8VXG0
        Length = 297

 Score = 171 (65.3 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:    55 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 97


>UNIPROTKB|O93353 [details] [associations]
            symbol:HOXA3 "Homeobox protein Hox-A3" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
            "angiogenesis" evidence=IEA] [GO:0001974 "blood vessel remodeling"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0010159 "specification of
            organ position" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0060017
            "parathyroid gland development" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 KO:K09303 OrthoDB:EOG4K6G4J InterPro:IPR025281
            Pfam:PF13293 CTD:3200 EMBL:AF067959 EMBL:AB111110 IPI:IPI00571086
            RefSeq:NP_989879.1 RefSeq:XP_003640749.1 UniGene:Gga.48467
            UniGene:Gga.49158 ProteinModelPortal:O93353 SMR:O93353
            Ensembl:ENSGALT00000018005 GeneID:100858480 GeneID:395231
            KEGG:gga:100858480 KEGG:gga:395231 InParanoid:O93353
            NextBio:20815320 Uniprot:O93353
        Length = 413

 Score = 175 (66.7 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   174 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 216


>UNIPROTKB|B7Z5N8 [details] [associations]
            symbol:HOXB3 "cDNA FLJ51054, highly similar to Homeobox
            protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0021546 "rhombomere development"
            evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0060216 "definitive
            hemopoiesis" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
            GO:GO:0060216 GO:GO:0050767 GO:GO:0030878 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
            EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114 ChiTaRS:HOXB3
            GO:GO:0021546 EMBL:AK299226 IPI:IPI00947370 SMR:B7Z5N8
            STRING:B7Z5N8 Ensembl:ENST00000460160 Ensembl:ENST00000485909
            Uniprot:B7Z5N8
        Length = 299

 Score = 171 (65.3 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:    57 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 99


>UNIPROTKB|Q08DG7 [details] [associations]
            symbol:HOXA3 "Homeobox protein Hox-A3" species:9913 "Bos
            taurus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0060017
            "parathyroid gland development" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048645 "organ
            formation" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IEA]
            [GO:0010159 "specification of organ position" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0001974 "blood vessel remodeling"
            evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0001974 GO:GO:0051216 GO:GO:0048538 GO:GO:0048645
            GO:GO:0048704 GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
            GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
            InterPro:IPR025281 Pfam:PF13293 EMBL:BC123759 IPI:IPI00693889
            RefSeq:NP_001070293.1 UniGene:Bt.87350 ProteinModelPortal:Q08DG7
            SMR:Q08DG7 PRIDE:Q08DG7 Ensembl:ENSBTAT00000010700 GeneID:509991
            KEGG:bta:509991 CTD:3200 InParanoid:Q08DG7 NextBio:20869233
            GO:GO:0021615 Uniprot:Q08DG7
        Length = 442

 Score = 175 (66.7 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234


>UNIPROTKB|J9NWE8 [details] [associations]
            symbol:HOXA3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
            InterPro:IPR025281 Pfam:PF13293 CTD:3200 EMBL:AAEX03009390
            RefSeq:XP_864544.1 Ensembl:ENSCAFT00000046660 GeneID:482368
            KEGG:cfa:482368 Uniprot:J9NWE8
        Length = 442

 Score = 175 (66.7 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   193 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 235


>UNIPROTKB|O43365 [details] [associations]
            symbol:HOXA3 "Homeobox protein Hox-A3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0010159 "specification of organ position"
            evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048645 "organ
            formation" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0060017 "parathyroid gland development"
            evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
            [GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0008284 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
            GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
            GO:GO:0010159 GO:GO:0060017 GO:GO:0030878 eggNOG:NOG284589
            EMBL:AC004079 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            OMA:HIQGSPV OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293
            CTD:3200 GO:GO:0021615 EMBL:BC015180 IPI:IPI00012050
            RefSeq:NP_109377.1 RefSeq:NP_705895.1 UniGene:Hs.659337
            ProteinModelPortal:O43365 SMR:O43365 STRING:O43365
            PhosphoSite:O43365 PaxDb:O43365 PRIDE:O43365 DNASU:3200
            Ensembl:ENST00000317201 Ensembl:ENST00000396352 GeneID:3200
            KEGG:hsa:3200 UCSC:uc003syk.3 GeneCards:GC07M027113 HGNC:HGNC:5104
            HPA:HPA029157 MIM:142954 neXtProt:NX_O43365 PharmGKB:PA29381
            InParanoid:O43365 PhylomeDB:O43365 GenomeRNAi:3200 NextBio:12728
            ArrayExpress:O43365 Bgee:O43365 CleanEx:HS_HOXA3
            Genevestigator:O43365 GermOnline:ENSG00000105997 Uniprot:O43365
        Length = 443

 Score = 175 (66.7 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234


>UNIPROTKB|F1SHT1 [details] [associations]
            symbol:HOXA3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0060017 "parathyroid gland
            development" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0030878 "thyroid
            gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
            nerve morphogenesis" evidence=IEA] [GO:0010159 "specification of
            organ position" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0001974 "blood
            vessel remodeling" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
            GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
            GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
            GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
            InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615
            EMBL:CU570959 RefSeq:XP_003134890.1 Ensembl:ENSSSCT00000018186
            GeneID:100519809 KEGG:ssc:100519809 Uniprot:F1SHT1
        Length = 443

 Score = 175 (66.7 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234


>MGI|MGI:96175 [details] [associations]
            symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
            [GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
            evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] [GO:0010159 "specification of organ
            position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
            development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
            [GO:0048706 "embryonic skeletal system development" evidence=IGI]
            [GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
            "parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
            domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
            GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
            GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
            GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
            InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
            EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
            RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
            ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
            PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
            GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
            NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
            GermOnline:ENSMUSG00000059723 Uniprot:P02831
        Length = 443

 Score = 175 (66.7 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   193 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 235


>RGD|1561431 [details] [associations]
            symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
            [GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
            remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
            evidence=ISO] [GO:0009952 "anterior/posterior pattern
            specification" evidence=ISO] [GO:0010159 "specification of organ
            position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
            development" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048538 "thymus development"
            evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
            [GO:0048706 "embryonic skeletal system development" evidence=ISO]
            [GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
            "parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
            domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
            GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
            GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
            GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
            OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
            GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
            RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
            Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
            KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
            Uniprot:D3ZM81
        Length = 444

 Score = 175 (66.7 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+LTERQ
Sbjct:   193 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 235


>MGI|MGI:96182 [details] [associations]
            symbol:Hoxb1 "homeobox B1" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IGI]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0019904 "protein domain specific binding"
            evidence=ISO] [GO:0021546 "rhombomere development" evidence=IDA]
            [GO:0021570 "rhombomere 4 development" evidence=IGI] [GO:0021571
            "rhombomere 5 development" evidence=IGI] [GO:0021612 "facial nerve
            structural organization" evidence=IMP] [GO:0021754 "facial nucleus
            development" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IGI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0048646 "anatomical structure formation involved in
            morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96182 GO:GO:0005634
            GO:GO:0005737 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0021612
            GO:GO:0021571 GO:GO:0021754 GeneTree:ENSGT00700000104161
            eggNOG:NOG236971 KO:K09301 HOGENOM:HOG000247020 HOVERGEN:HBG006089
            GO:GO:0021570 OrthoDB:EOG44F69X CTD:3211 OMA:YAICNRG EMBL:X53063
            EMBL:X59474 EMBL:AK017686 EMBL:BC103597 EMBL:BC103598 EMBL:BC103606
            EMBL:M34005 IPI:IPI00308822 PIR:A60082 RefSeq:NP_032292.3
            UniGene:Mm.890 ProteinModelPortal:P17919 SMR:P17919 STRING:P17919
            PhosphoSite:P17919 PRIDE:P17919 Ensembl:ENSMUST00000019117
            GeneID:15407 KEGG:mmu:15407 InParanoid:P17919 NextBio:288120
            Bgee:P17919 CleanEx:MM_HOXB1 Genevestigator:P17919
            GermOnline:ENSMUSG00000018973 Uniprot:P17919
        Length = 297

 Score = 154 (59.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  LRT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:   197 GAPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 242

 Score = 34 (17.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 9/18 (50%), Positives = 9/18 (50%)

Query:     5 QERQQRSYFIPSSIMIQL 22
             Q     SYF PSS   QL
Sbjct:   100 QSEGDGSYFHPSSYGAQL 117


>UNIPROTKB|B7ZAD0 [details] [associations]
            symbol:HOXB3 "cDNA, FLJ79144, highly similar to Homeobox
            protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0021546 "rhombomere development"
            evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0060216 "definitive
            hemopoiesis" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
            GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
            GO:GO:0030878 HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293
            GO:GO:0021615 EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114
            ChiTaRS:HOXB3 GO:GO:0021546 EMBL:AK316245 IPI:IPI00947155
            SMR:B7ZAD0 STRING:B7ZAD0 Ensembl:ENST00000472863
            Ensembl:ENST00000489475 Uniprot:B7ZAD0
        Length = 358

 Score = 171 (65.3 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:   116 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 158


>UNIPROTKB|F1NH10 [details] [associations]
            symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000979 "RNA polymerase
            II core promoter sequence-specific DNA binding" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0021546 "rhombomere development" evidence=IEA] [GO:0021615
            "glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0050767
            "regulation of neurogenesis" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
            evidence=IEA] [GO:0060324 "face development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000979
            GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
            OMA:ATYYDNT IPI:IPI00594134 EMBL:AADN02027051
            Ensembl:ENSGALT00000021935 Uniprot:F1NH10
        Length = 377

 Score = 171 (65.3 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:   159 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 201


>UNIPROTKB|J9NW05 [details] [associations]
            symbol:HOXB3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
            OMA:ATYYDNT EMBL:AAEX03006513 EMBL:AAEX03006514
            Ensembl:ENSCAFT00000042839 Uniprot:J9NW05
        Length = 436

 Score = 172 (65.6 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 31/49 (63%), Positives = 41/49 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQSDCKYY 127
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ER+   K +
Sbjct:   192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERERQIKIW 240


>UNIPROTKB|P23682 [details] [associations]
            symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG284589
            HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 OrthoDB:EOG4S4PH1 EMBL:X74506
            EMBL:X52749 IPI:IPI00594134 PIR:S10885 PIR:S71480
            RefSeq:NP_990074.1 UniGene:Gga.2648 ProteinModelPortal:P23682
            SMR:P23682 STRING:P23682 GeneID:395502 KEGG:gga:395502 CTD:3213
            InParanoid:P23682 NextBio:20815581 Uniprot:P23682
        Length = 399

 Score = 171 (65.3 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:   160 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 202


>ZFIN|ZDB-GENE-990415-104 [details] [associations]
            symbol:hoxb3a "homeo box B3a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-104
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
            HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 EMBL:AJ537509 EMBL:AL645782
            EMBL:BC095559 EMBL:Y13944 EMBL:BK005081 EMBL:BK005082
            IPI:IPI00486662 RefSeq:NP_571192.2 UniGene:Dr.132502
            ProteinModelPortal:O42368 SMR:O42368 STRING:O42368
            Ensembl:ENSDART00000078466 GeneID:30339 KEGG:dre:30339 CTD:30339
            InParanoid:O42368 OMA:ATYYDNT OrthoDB:EOG4S4PH1 NextBio:20806770
            ArrayExpress:O42368 Bgee:O42368 Uniprot:O42368
        Length = 417

 Score = 171 (65.3 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:   181 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 223


>UNIPROTKB|A5PKI4 [details] [associations]
            symbol:HOXB3 "HOXB3 protein" species:9913 "Bos taurus"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0050767
            "regulation of neurogenesis" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0030878 "thyroid
            gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
            nerve morphogenesis" evidence=IEA] [GO:0021546 "rhombomere
            development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0003700
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
            GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
            GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
            HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
            OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:DAAA02049067
            EMBL:BC142499 IPI:IPI00706525 RefSeq:NP_001092644.1
            UniGene:Bt.27955 SMR:A5PKI4 Ensembl:ENSBTAT00000028563
            GeneID:618214 KEGG:bta:618214 InParanoid:A5PKI4 NextBio:20901061
            Uniprot:A5PKI4
        Length = 426

 Score = 171 (65.3 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:   184 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 226


>RGD|1310780 [details] [associations]
            symbol:Hoxb3 "homeo box B3" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA;ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA;ISO] [GO:0021546 "rhombomere development"
            evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
            development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0050767 "regulation of
            neurogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage development"
            evidence=IEA;ISO] [GO:0060216 "definitive hemopoiesis"
            evidence=IEA;ISO] [GO:0060324 "face development" evidence=IEA;ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:1310780 GO:GO:0005634
            GO:GO:0009952 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
            GO:GO:0060216 GO:GO:0050767 GO:GO:0030878
            GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
            OrthoDB:EOG4S4PH1 GO:GO:0021546 EMBL:BC166859 IPI:IPI00194971
            UniGene:Rn.208556 SMR:B2RYQ0 STRING:B2RYQ0
            Ensembl:ENSRNOT00000011027 Genevestigator:B2RYQ0 Uniprot:B2RYQ0
        Length = 428

 Score = 171 (65.3 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:   187 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 229


>UNIPROTKB|P14651 [details] [associations]
            symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
            binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0021546 "rhombomere development"
            evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0060216 "definitive
            hemopoiesis" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
            "angiogenesis" evidence=IEP] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 EMBL:CH471109 GO:GO:0051216 GO:GO:0060324
            GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
            GO:GO:0030878 eggNOG:NOG284589 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 KO:K09303 InterPro:IPR025281 Pfam:PF13293
            GO:GO:0021615 OMA:ATYYDNT OrthoDB:EOG4S4PH1 CTD:3213 EMBL:X16667
            EMBL:U59298 EMBL:AF287967 EMBL:AK291182 EMBL:AK315102 EMBL:X16175
            IPI:IPI00027259 PIR:S07543 RefSeq:NP_002137.4 UniGene:Hs.654560
            ProteinModelPortal:P14651 SMR:P14651 STRING:P14651 DMDM:215274007
            PaxDb:P14651 PRIDE:P14651 DNASU:3213 Ensembl:ENST00000311626
            Ensembl:ENST00000470495 Ensembl:ENST00000476342
            Ensembl:ENST00000498678 GeneID:3213 KEGG:hsa:3213 UCSC:uc002inn.3
            GeneCards:GC17M046626 HGNC:HGNC:5114 HPA:CAB009860 MIM:142966
            neXtProt:NX_P14651 PharmGKB:PA29390 InParanoid:P14651
            PhylomeDB:P14651 ChiTaRS:HOXB3 GenomeRNAi:3213 NextBio:12784
            ArrayExpress:P14651 Bgee:P14651 CleanEx:HS_HOXB3
            Genevestigator:P14651 GermOnline:ENSG00000120093 GO:GO:0021546
            Uniprot:P14651
        Length = 431

 Score = 171 (65.3 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:   189 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 231


>MGI|MGI:96184 [details] [associations]
            symbol:Hoxb3 "homeobox B3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0000979 "RNA polymerase
            II core promoter sequence-specific DNA binding" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0021546 "rhombomere development" evidence=IDA]
            [GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
            [GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IGI;IMP]
            [GO:0050767 "regulation of neurogenesis" evidence=IDA] [GO:0051216
            "cartilage development" evidence=IGI] [GO:0060216 "definitive
            hemopoiesis" evidence=IGI] [GO:0060324 "face development"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96184
            GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 GO:GO:0006351
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
            GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
            GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
            HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
            OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:X66177 EMBL:S35628
            EMBL:U02278 EMBL:M18168 IPI:IPI00315401 PIR:S20963
            RefSeq:NP_001073338.1 RefSeq:NP_034588.2 UniGene:Mm.342481
            ProteinModelPortal:P09026 SMR:P09026 STRING:P09026 PaxDb:P09026
            PRIDE:P09026 Ensembl:ENSMUST00000055334 Ensembl:ENSMUST00000093944
            GeneID:15410 KEGG:mmu:15410 InParanoid:P09026 NextBio:288128
            Bgee:P09026 CleanEx:MM_HOXB3 Genevestigator:P09026
            GermOnline:ENSMUSG00000048763 Uniprot:P09026
        Length = 433

 Score = 171 (65.3 bits), Expect = 3.4e-12, P = 3.4e-12
 Identities = 31/43 (72%), Positives = 39/43 (90%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L+L+ERQ
Sbjct:   192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 234


>UNIPROTKB|G3V737 [details] [associations]
            symbol:Hoxb1 "Homeo box B1 (Predicted), isoform CRA_a"
            species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0021570 "rhombomere 4 development"
            evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
            [GO:0021612 "facial nerve structural organization" evidence=IEA]
            [GO:0021754 "facial nucleus development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1310298 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:CH473948 GeneTree:ENSGT00700000104161 KO:K09301 CTD:3211
            OMA:YAICNRG RefSeq:XP_001081344.1 RefSeq:XP_220896.4
            UniGene:Rn.13797 Ensembl:ENSRNOT00000011416 GeneID:303491
            KEGG:rno:303491 NextBio:651436 Uniprot:G3V737
        Length = 297

 Score = 154 (59.3 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  LRT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:   197 GTPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 242

 Score = 30 (15.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
 Identities = 8/18 (44%), Positives = 8/18 (44%)

Query:     5 QERQQRSYFIPSSIMIQL 22
             Q      YF PSS   QL
Sbjct:   100 QSEGDGGYFHPSSYGAQL 117


>UNIPROTKB|P14653 [details] [associations]
            symbol:HOXB1 "Homeobox protein Hox-B1" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
            [GO:0021571 "rhombomere 5 development" evidence=IEA] [GO:0021612
            "facial nerve structural organization" evidence=IEA] [GO:0021754
            "facial nucleus development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048646 "anatomical structure formation involved
            in morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS;TAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0007389 "pattern specification process"
            evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0019904
            "protein domain specific binding" evidence=IPI] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
            GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0007389 GO:GO:0021612
            GO:GO:0021571 GO:GO:0021754 eggNOG:NOG236971 KO:K09301
            HOGENOM:HOG000247020 HOVERGEN:HBG006089 GO:GO:0021570
            OrthoDB:EOG44F69X EMBL:X16666 EMBL:AC103702 IPI:IPI00294724
            PIR:S07541 RefSeq:NP_002135.2 UniGene:Hs.99992 PDB:1B72 PDBsum:1B72
            ProteinModelPortal:P14653 SMR:P14653 DIP:DIP-6106N IntAct:P14653
            STRING:P14653 PhosphoSite:P14653 DMDM:251757285 PRIDE:P14653
            Ensembl:ENST00000239174 GeneID:3211 KEGG:hsa:3211 UCSC:uc002ink.1
            CTD:3211 GeneCards:GC17M046606 HGNC:HGNC:5111 HPA:HPA044576
            MIM:142968 MIM:614744 neXtProt:NX_P14653 PharmGKB:PA29387
            InParanoid:P14653 OMA:YAICNRG PhylomeDB:P14653
            EvolutionaryTrace:P14653 GenomeRNAi:3211 NextBio:12776 Bgee:P14653
            CleanEx:HS_HOXB1 Genevestigator:P14653 GermOnline:ENSG00000120094
            Uniprot:P14653
        Length = 301

 Score = 154 (59.3 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  LRT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:   201 GSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 246

 Score = 30 (15.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
 Identities = 8/18 (44%), Positives = 8/18 (44%)

Query:     5 QERQQRSYFIPSSIMIQL 22
             Q      YF PSS   QL
Sbjct:   103 QSEGDGGYFHPSSYGAQL 120


>UNIPROTKB|F1NZJ3 [details] [associations]
            symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
            UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
            RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
            GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
            Uniprot:F1NZJ3
        Length = 237

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   144 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 189


>UNIPROTKB|P17278 [details] [associations]
            symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
            HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
            IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
            ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
            InParanoid:P17278 Uniprot:P17278
        Length = 235

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   142 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 187


>UNIPROTKB|F1MJX6 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
            Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
        Length = 253

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   146 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 191


>UNIPROTKB|H0YHX3 [details] [associations]
            symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
        Length = 140

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:    33 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 78


>MGI|MGI:96208 [details] [associations]
            symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
            GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
            EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
            PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
            ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
            PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
            Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
            UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
            Genevestigator:P10628 Uniprot:P10628
        Length = 250

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   150 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 195


>RGD|1309690 [details] [associations]
            symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
            evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
            OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
            RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
            GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
            Uniprot:D4ACE1
        Length = 251

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   150 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 195


>RGD|2321880 [details] [associations]
            symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
            Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
        Length = 189

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:    82 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 127


>UNIPROTKB|E2RGY0 [details] [associations]
            symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
            EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
        Length = 254

 Score = 162 (62.1 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   149 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 194


>UNIPROTKB|P09016 [details] [associations]
            symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
            EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
            IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
            ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
            PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
            Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
            CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
            neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
            PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
            CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
            Uniprot:P09016
        Length = 255

 Score = 162 (62.1 bits), Expect = 5.3e-12, P = 5.3e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   152 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197


>UNIPROTKB|F1RZG0 [details] [associations]
            symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
            KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
            Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
            Uniprot:F1RZG0
        Length = 257

 Score = 162 (62.1 bits), Expect = 5.6e-12, P = 5.6e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   153 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 198


>UNIPROTKB|A7MBD6 [details] [associations]
            symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
            EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
            UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
            GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
            Uniprot:A7MBD6
        Length = 258

 Score = 162 (62.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   155 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 200


>UNIPROTKB|H9L184 [details] [associations]
            symbol:Gga.48067 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
            "cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
            [GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
            stem cell differentiation" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:AADN02014570
            Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
        Length = 102

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 32/46 (69%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA SL L+ERQ
Sbjct:     8 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQ 53


>UNIPROTKB|P14840 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
            RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
            SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
            eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
        Length = 245

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 32/46 (69%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA SL L+ERQ
Sbjct:   148 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQ 193


>ZFIN|ZDB-GENE-000823-4 [details] [associations]
            symbol:hoxa4a "homeo box A4a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-000823-4 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            EMBL:CR382300 EMBL:AF071246 EMBL:BC122457 EMBL:DQ060533 EMBL:M76382
            EMBL:Y13947 IPI:IPI00487552 PIR:S34415 RefSeq:NP_571610.1
            UniGene:Dr.159437 ProteinModelPortal:Q9PWL5 SMR:Q9PWL5
            Ensembl:ENSDART00000080466 GeneID:58050 KEGG:dre:58050 CTD:58050
            eggNOG:NOG317510 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            InParanoid:Q9PWL5 OMA:PGDYYER OrthoDB:EOG4S1T87 NextBio:20892314
            Bgee:Q9PWL5 Uniprot:Q9PWL5
        Length = 245

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G+P+R RTAYT  Q LELEKEFHFN+YL R RR+EIA ++ L+ERQ
Sbjct:   145 GVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQ 190


>UNIPROTKB|A4FUC1 [details] [associations]
            symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
            binding" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
            KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
            EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
            UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
            GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
            Uniprot:A4FUC1
        Length = 264

 Score = 162 (62.1 bits), Expect = 6.6e-12, P = 6.6e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RRIEIA SL L+ERQ
Sbjct:   154 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQ 199


>UNIPROTKB|E2QSM9 [details] [associations]
            symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
            "HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
            OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
            RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
            KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
        Length = 264

 Score = 162 (62.1 bits), Expect = 6.6e-12, P = 6.6e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RRIEIA SL L+ERQ
Sbjct:   154 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQ 199


>UNIPROTKB|P09017 [details] [associations]
            symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
            OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
            IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
            UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
            IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
            PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
            Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
            CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
            H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
            neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
            PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
            Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
        Length = 264

 Score = 162 (62.1 bits), Expect = 6.6e-12, P = 6.6e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RRIEIA SL L+ERQ
Sbjct:   154 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQ 199


>UNIPROTKB|F1SR58 [details] [associations]
            symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
            OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
            Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
            Uniprot:F1SR58
        Length = 264

 Score = 162 (62.1 bits), Expect = 6.6e-12, P = 6.6e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RRIEIA SL L+ERQ
Sbjct:   154 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQ 199


>MGI|MGI:96195 [details] [associations]
            symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
            [GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
            [GO:0071837 "HMG box domain binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
            OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
            EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
            UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
            PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
            GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
            NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
            GermOnline:ENSMUSG00000075394 Uniprot:Q08624
        Length = 264

 Score = 162 (62.1 bits), Expect = 6.6e-12, P = 6.6e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RRIEIA SL L+ERQ
Sbjct:   154 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQ 199


>MGI|MGI:96176 [details] [associations]
            symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IDA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
            GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
            KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
            eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
            EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
            EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
            UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
            STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
            Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
            UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
            CleanEx:MM_HOXA4 Genevestigator:P06798
            GermOnline:ENSMUSG00000000942 Uniprot:P06798
        Length = 285

 Score = 162 (62.1 bits), Expect = 9.8e-12, P = 9.8e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   178 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 223


>UNIPROTKB|E9PT77 [details] [associations]
            symbol:LOC100360577 "Protein LOC100360577" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
            UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
            RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
            Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
            KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
            Uniprot:E9PT77
        Length = 285

 Score = 162 (62.1 bits), Expect = 9.8e-12, P = 9.8e-12
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   178 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 223


>ZFIN|ZDB-GENE-980526-214 [details] [associations]
            symbol:hoxd4a "homeo box D4a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
            EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
            UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
            Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
            NextBio:20806762 Uniprot:B0S5Y5
        Length = 256

 Score = 159 (61.0 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query:    78 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   166 PKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 209


>ZFIN|ZDB-GENE-990415-105 [details] [associations]
            symbol:hoxb4a "homeo box B4a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
            EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
            UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
            Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
            InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
            Bgee:P22574 Uniprot:P22574
        Length = 246

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   149 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQ 194


>UNIPROTKB|F1NMG4 [details] [associations]
            symbol:LOC100858374 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
            Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
        Length = 309

 Score = 162 (62.1 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   207 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 252


>UNIPROTKB|P17277 [details] [associations]
            symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
            IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
            RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
            SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
            KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
            OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
        Length = 309

 Score = 162 (62.1 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   207 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 252


>MGI|MGI:96185 [details] [associations]
            symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
            an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] [GO:0030097 "hemopoiesis"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
            stem cell division" evidence=IDA] [GO:0048536 "spleen development"
            evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
            [GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
            [GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
            "positive regulation of stem cell differentiation" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
            EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
            RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
            SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
            PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
            InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
            Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
        Length = 250

 Score = 158 (60.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   159 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQ 204


>RGD|1560113 [details] [associations]
            symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
            proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
            "somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
            development" evidence=IEA;ISO] [GO:0048539 "bone marrow
            development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
            system morphogenesis" evidence=ISO] [GO:0060216 "definitive
            hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
            differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
            of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
            GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
            GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
            OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
            RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
            Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
            NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
        Length = 250

 Score = 158 (60.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   159 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQ 204


>UNIPROTKB|F1N257 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
            marrow development" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
            IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
            Ensembl:ENSBTAT00000043402 Uniprot:F1N257
        Length = 251

 Score = 158 (60.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   160 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQ 205


>UNIPROTKB|Q08DG5 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
            EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
            UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
            GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
            NextBio:20918537 Uniprot:Q08DG5
        Length = 251

 Score = 158 (60.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   160 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQ 205


>UNIPROTKB|F6UWC1 [details] [associations]
            symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
            EMBL:AAEX03006515 Uniprot:F6UWC1
        Length = 251

 Score = 158 (60.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   160 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQ 205


>UNIPROTKB|P17483 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
            an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048103 "somatic stem cell
            division" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:2000738 "positive regulation of stem cell
            differentiation" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
            GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
            GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
            EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
            RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
            SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
            PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
            Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
            GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
            PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
            NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
            GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
        Length = 251

 Score = 158 (60.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   160 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQ 205


>UNIPROTKB|F1RWG5 [details] [associations]
            symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
            marrow development" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
            OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
            Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
            Uniprot:F1RWG5
        Length = 251

 Score = 158 (60.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   160 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQ 205


>UNIPROTKB|F1PZZ7 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
            Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
            NextBio:20856981 Uniprot:F1PZZ7
        Length = 317

 Score = 162 (62.1 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   210 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 255


>UNIPROTKB|G3MXN5 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
            UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
            Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
            Uniprot:G3MXN5
        Length = 319

 Score = 162 (62.1 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   212 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 257


>UNIPROTKB|Q00056 [details] [associations]
            symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
            GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
            HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
            EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
            RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
            ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
            PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
            PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
            Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
            GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
            PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
            GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
            CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
            Uniprot:Q00056
        Length = 320

 Score = 162 (62.1 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   213 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 258


>ZFIN|ZDB-GENE-990415-112 [details] [associations]
            symbol:hoxc4a "homeo box C4a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
            EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
            UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
            Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
            InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
            Uniprot:Q9PWM3
        Length = 268

 Score = 159 (61.0 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query:    78 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             P+R RTAYT  Q+LELEKEFH+N+YL R RRIEIA SL L+ERQ
Sbjct:   154 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQ 197


>UNIPROTKB|F1SHT2 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
            RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
            GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
        Length = 329

 Score = 162 (62.1 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   220 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 265


>UNIPROTKB|E1C2J1 [details] [associations]
            symbol:PDX1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0031017 "exocrine
            pancreas development" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0042593 "glucose homeostasis"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048565
            "digestive tract development" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
            [GO:0007263 "nitric oxide mediated signal transduction"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0016331 "morphogenesis of
            embryonic epithelium" evidence=IEA] [GO:0030073 "insulin secretion"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0008284
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
            GO:GO:0042593 GO:GO:0006006 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0007263
            GO:GO:0030073 GeneTree:ENSGT00700000104446 OMA:PYEVPPI
            EMBL:AADN02005194 IPI:IPI00811289 Ensembl:ENSGALT00000036448
            Uniprot:E1C2J1
        Length = 224

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A  L+LTER
Sbjct:   142 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 183


>ZFIN|ZDB-GENE-990415-122 [details] [associations]
            symbol:pdx1 "pancreatic and duodenal homeobox 1"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0031018 "endocrine pancreas development"
            evidence=IMP] [GO:0035469 "determination of pancreatic left/right
            asymmetry" evidence=IMP] [GO:0031016 "pancreas development"
            evidence=IMP] [GO:0071910 "determination of liver left/right
            asymmetry" evidence=IMP] [GO:0071907 "determination of digestive
            tract left/right asymmetry" evidence=IMP] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-990415-122 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0031018 GO:GO:0071907 CTD:3651
            HOVERGEN:HBG004525 KO:K07594 GO:GO:0035469 GO:GO:0071910
            EMBL:BC078192 IPI:IPI00510470 RefSeq:NP_571518.2 UniGene:Dr.75810
            ProteinModelPortal:Q6DC85 SMR:Q6DC85 STRING:Q6DC85 DNASU:30721
            GeneID:30721 KEGG:dre:30721 InParanoid:Q6DC85 NextBio:20807070
            ArrayExpress:Q6DC85 Uniprot:Q6DC85
        Length = 246

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A +L LTER
Sbjct:   138 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTER 179


>UNIPROTKB|E2QT52 [details] [associations]
            symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
        Length = 274

 Score = 158 (60.7 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P+R RTAYT  Q+LELEKEFH+N+YL R RR+EIA +L L+ERQ
Sbjct:   167 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQ 212


>RGD|1588601 [details] [associations]
            symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
            [GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
            "Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA;ISO]
            [GO:0010628 "positive regulation of gene expression"
            evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
            development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
            development" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
            PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
            STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
            Genevestigator:P18867 Uniprot:P18867
        Length = 114

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/39 (74%), Positives = 35/39 (89%)

Query:    83 TAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             TAYT+ QL+ELEKEFHFN+YLCR RR+E+A  L+LTERQ
Sbjct:    16 TAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQ 54


>UNIPROTKB|P18867 [details] [associations]
            symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
            PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
            STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
            Genevestigator:P18867 Uniprot:P18867
        Length = 114

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/39 (74%), Positives = 35/39 (89%)

Query:    83 TAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             TAYT+ QL+ELEKEFHFN+YLCR RR+E+A  L+LTERQ
Sbjct:    16 TAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQ 54


>UNIPROTKB|F1RWG6 [details] [associations]
            symbol:HOXB3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060324 "face
            development" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0021615
            "glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0021546
            "rhombomere development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0003700
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
            GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
            GO:GO:0030878 GeneTree:ENSGT00700000104189 InterPro:IPR025281
            Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT GO:GO:0021546 EMBL:CU856160
            Ensembl:ENSSSCT00000019088 Uniprot:F1RWG6
        Length = 431

 Score = 162 (62.1 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 30/43 (69%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT+ QL+ELEKEFHFN+YLCRPRR+E+A  L   ERQ
Sbjct:   188 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLTSAERQ 230


>UNIPROTKB|F6VFN9 [details] [associations]
            symbol:HOXB1 "Homeobox protein Hox-B1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AADN02027057
            EMBL:AADN02027058 EMBL:AADN02027059 IPI:IPI00589698
            ProteinModelPortal:F6VFN9 Ensembl:ENSGALT00000021934 Uniprot:F6VFN9
        Length = 75

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/46 (65%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:    30 GQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQ 75


>UNIPROTKB|E2RI92 [details] [associations]
            symbol:PDX1 "Pancreatic and duodenum homeobox 1"
            species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
            evidence=IEA] [GO:0048565 "digestive tract development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0031017 "exocrine pancreas
            development" evidence=IEA] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA]
            [GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0007263 "nitric oxide mediated
            signal transduction" evidence=IEA] [GO:0006006 "glucose metabolic
            process" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0008285 GO:GO:0030154
            GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0001889
            GO:GO:0003700 GO:GO:0003682 GO:GO:0042593 GO:GO:0006006
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0007263 GO:GO:0031018 GO:GO:0016331
            GO:GO:0048565 GO:GO:0030073 GO:GO:0031017
            GeneTree:ENSGT00700000104446 CTD:3651 KO:K07594 OMA:PYEVPPI
            EMBL:AAEX03014241 EMBL:HQ454506 RefSeq:XP_543155.3
            UniGene:Cfa.16232 Ensembl:ENSCAFT00000010866 GeneID:493994
            KEGG:cfa:493994 NextBio:20865524 Uniprot:E2RI92
        Length = 282

 Score = 156 (60.0 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A  L+LTER
Sbjct:   146 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 187


>UNIPROTKB|P52945 [details] [associations]
            symbol:PDX1 "Pancreas/duodenum homeobox protein 1"
            species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001046 "core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0006006 "glucose
            metabolic process" evidence=IEA] [GO:0006366 "transcription from
            RNA polymerase II promoter" evidence=IEA] [GO:0007224 "smoothened
            signaling pathway" evidence=IEA] [GO:0007417 "central nervous
            system development" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0009611 "response to
            wounding" evidence=IEA] [GO:0010157 "response to chlorate"
            evidence=IEA] [GO:0010260 "organ senescence" evidence=IEA]
            [GO:0010942 "positive regulation of cell death" evidence=IEA]
            [GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
            [GO:0031017 "exocrine pancreas development" evidence=IEA]
            [GO:0031100 "organ regeneration" evidence=IEA] [GO:0032024
            "positive regulation of insulin secretion" evidence=IEA]
            [GO:0032403 "protein complex binding" evidence=IEA] [GO:0033273
            "response to vitamin" evidence=IEA] [GO:0034097 "response to
            cytokine stimulus" evidence=IEA] [GO:0035094 "response to nicotine"
            evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043201
            "response to leucine" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
            tract development" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0051384 "response to
            glucocorticoid stimulus" evidence=IEA] [GO:0060290
            "transdifferentiation" evidence=IEA] [GO:0070542 "response to fatty
            acid" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0006091 "generation of precursor
            metabolites and energy" evidence=TAS] [GO:0009887 "organ
            morphogenesis" evidence=TAS] [GO:0031018 "endocrine pancreas
            development" evidence=TAS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=TAS] [GO:0007263
            "nitric oxide mediated signal transduction" evidence=IDA]
            [GO:0030073 "insulin secretion" evidence=IDA] [GO:0051594
            "detection of glucose" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0003309 "type B pancreatic cell differentiation"
            evidence=ISS;IDA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005829 GO:GO:0005634 Reactome:REACT_111045 GO:GO:0008285
            GO:GO:0008284 EMBL:CH471075 GO:GO:0043565 GO:GO:0045944
            GO:GO:0001889 GO:GO:0003700 GO:GO:0003682 GO:GO:0042593
            GO:GO:0006006 GO:GO:0006091 Orphanet:552 Orphanet:99885
            Pathway_Interaction_DB:hnf3bpathway Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0009887 GO:GO:0006366 MIM:125853 GO:GO:0007263 GO:GO:0016331
            GO:GO:0048565 GO:GO:0030073 GO:GO:0031017 GO:GO:0003309
            GO:GO:0051594 CleanEx:HS_PDX1 EMBL:U35632 EMBL:S82178 EMBL:S82168
            EMBL:U30329 EMBL:X99894 EMBL:AF035260 EMBL:AF035259 EMBL:AF049893
            EMBL:AL353195 IPI:IPI00006036 PIR:G01926 RefSeq:NP_000200.1
            UniGene:Hs.32938 ProteinModelPortal:P52945 SMR:P52945 STRING:P52945
            PhosphoSite:P52945 DMDM:1708540 PRIDE:P52945 DNASU:3651
            Ensembl:ENST00000381033 GeneID:3651 KEGG:hsa:3651 UCSC:uc001urt.2
            CTD:3651 GeneCards:GC13P028494 HGNC:HGNC:6107 HPA:CAB025873
            MIM:260370 MIM:600733 MIM:606392 neXtProt:NX_P52945 Orphanet:2805
            PharmGKB:PA162399173 eggNOG:NOG271681 HOGENOM:HOG000115484
            HOVERGEN:HBG004525 InParanoid:P52945 KO:K07594 OMA:PYEVPPI
            OrthoDB:EOG4M0F2P PhylomeDB:P52945 GenomeRNAi:3651 NextBio:14279
            Bgee:P52945 Genevestigator:P52945 GermOnline:ENSG00000139515
            Uniprot:P52945
        Length = 283

 Score = 156 (60.0 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A  L+LTER
Sbjct:   147 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 188


>UNIPROTKB|F1RSV7 [details] [associations]
            symbol:F1RSV7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104446
            EMBL:CU861636 Ensembl:ENSSSCT00000010205 OMA:RMKWRER Uniprot:F1RSV7
        Length = 283

 Score = 156 (60.0 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A  L+LTER
Sbjct:   148 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 189


>RGD|62387 [details] [associations]
            symbol:Pdx1 "pancreatic and duodenal homeobox 1" species:10116
           "Rattus norvegicus" [GO:0000122 "negative regulation of
           transcription from RNA polymerase II promoter" evidence=IEA;ISO]
           [GO:0001046 "core promoter sequence-specific DNA binding"
           evidence=IDA] [GO:0001889 "liver development" evidence=IEA;ISO]
           [GO:0003309 "type B pancreatic cell differentiation"
           evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=ISO]
           [GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
           "sequence-specific DNA binding transcription factor activity"
           evidence=ISO;IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
           [GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
           evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
           "cytosol" evidence=IEA] [GO:0006006 "glucose metabolic process"
           evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
           evidence=IMP] [GO:0006355 "regulation of transcription,
           DNA-dependent" evidence=TAS] [GO:0006357 "regulation of
           transcription from RNA polymerase II promoter" evidence=ISO]
           [GO:0006366 "transcription from RNA polymerase II promoter"
           evidence=IMP] [GO:0007224 "smoothened signaling pathway"
           evidence=IMP] [GO:0007263 "nitric oxide mediated signal
           transduction" evidence=IEA;ISO] [GO:0007417 "central nervous system
           development" evidence=IEP] [GO:0008134 "transcription factor
           binding" evidence=IPI] [GO:0008284 "positive regulation of cell
           proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation of
           cell proliferation" evidence=IEA;ISO] [GO:0009611 "response to
           wounding" evidence=IEP] [GO:0009749 "response to glucose stimulus"
           evidence=IEP;IMP] [GO:0010040 "response to iron(II) ion"
           evidence=IEP] [GO:0010157 "response to chlorate" evidence=IEP]
           [GO:0010260 "organ senescence" evidence=IEP] [GO:0010942 "positive
           regulation of cell death" evidence=IMP] [GO:0014070 "response to
           organic cyclic compound" evidence=IEP] [GO:0016331 "morphogenesis of
           embryonic epithelium" evidence=IEA;ISO] [GO:0030073 "insulin
           secretion" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
           evidence=ISO;IMP] [GO:0031016 "pancreas development"
           evidence=IEP;ISO] [GO:0031017 "exocrine pancreas development"
           evidence=IEA;ISO] [GO:0031018 "endocrine pancreas development"
           evidence=ISO] [GO:0031100 "organ regeneration" evidence=IEP]
           [GO:0031667 "response to nutrient levels" evidence=IEP] [GO:0032024
           "positive regulation of insulin secretion" evidence=IMP] [GO:0032403
           "protein complex binding" evidence=IDA;IPI] [GO:0033273 "response to
           vitamin" evidence=IEP] [GO:0033993 "response to lipid" evidence=IEP]
           [GO:0034097 "response to cytokine stimulus" evidence=IEP]
           [GO:0035094 "response to nicotine" evidence=IEP] [GO:0042127
           "regulation of cell proliferation" evidence=ISO] [GO:0042493
           "response to drug" evidence=IEP] [GO:0042593 "glucose homeostasis"
           evidence=ISO;IMP] [GO:0043201 "response to leucine" evidence=IEP]
           [GO:0043279 "response to alkaloid" evidence=IEP] [GO:0043388
           "positive regulation of DNA binding" evidence=IMP] [GO:0043565
           "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
           "negative regulation of transcription, DNA-dependent" evidence=IMP]
           [GO:0045893 "positive regulation of transcription, DNA-dependent"
           evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
           from RNA polymerase II promoter" evidence=ISO;IDA;IMP] [GO:0046982
           "protein heterodimerization activity" evidence=IDA] [GO:0048565
           "digestive tract development" evidence=IEA;ISO] [GO:0048863 "stem
           cell differentiation" evidence=IEP;IMP] [GO:0051384 "response to
           glucocorticoid stimulus" evidence=IEP] [GO:0051594 "detection of
           glucose" evidence=IDA] [GO:0060290 "transdifferentiation"
           evidence=IEP] [GO:0070542 "response to fatty acid" evidence=IEP]
           [GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA
           binding transcription factor activity" evidence=IDA]
           InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
           InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
           PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:62387
           GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
           GO:GO:0009611 GO:GO:0032403 GO:GO:0042493 GO:GO:0070542
           GO:GO:0008284 GO:GO:0031100 GO:GO:0034097 GO:GO:0045944
           GO:GO:0048863 GO:GO:0051384 GO:GO:0007417 GO:GO:0032024
           GO:GO:0003700 GO:GO:0042593 Gene3D:1.10.10.60 InterPro:IPR020479
           PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0010942
           GO:GO:0035094 GO:GO:0046982 GO:GO:0007224 GO:GO:0001046
           GO:GO:0043388 GO:GO:0060290 GO:GO:0010260 GO:GO:0003309
           GO:GO:0051594 GO:GO:0033273 GO:GO:0043201 GO:GO:0010157 CTD:3651
           HOVERGEN:HBG004525 KO:K07594 EMBL:U04833 EMBL:S67435 IPI:IPI00327500
           PIR:S42634 RefSeq:NP_074043.3 UniGene:Rn.54603
           ProteinModelPortal:P52947 SMR:P52947 MINT:MINT-1894530
           PhosphoSite:P52947 GeneID:29535 KEGG:rno:29535 NextBio:609520
           Genevestigator:P52947 Uniprot:P52947
        Length = 283

 Score = 156 (60.0 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A  L+LTER
Sbjct:   147 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 188


>UNIPROTKB|F1RSW4 [details] [associations]
            symbol:PDX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104446
            OMA:PYEVPPI EMBL:FP236498 Ensembl:ENSSSCT00000010200
            ArrayExpress:F1RSW4 Uniprot:F1RSW4
        Length = 284

 Score = 156 (60.0 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A  L+LTER
Sbjct:   148 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 189


>MGI|MGI:102851 [details] [associations]
            symbol:Pdx1 "pancreatic and duodenal homeobox 1"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0001046 "core promoter sequence-specific DNA binding"
            evidence=ISO] [GO:0001889 "liver development" evidence=IMP]
            [GO:0003309 "type B pancreatic cell differentiation" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
            binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0006006 "glucose metabolic process" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=ISO]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IDA;IMP] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0007224 "smoothened signaling pathway" evidence=ISO]
            [GO:0007263 "nitric oxide mediated signal transduction"
            evidence=ISO] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=ISO] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation
            of cell proliferation" evidence=IMP] [GO:0009749 "response to
            glucose stimulus" evidence=ISO] [GO:0010942 "positive regulation of
            cell death" evidence=ISO] [GO:0016331 "morphogenesis of embryonic
            epithelium" evidence=IMP] [GO:0030073 "insulin secretion"
            evidence=ISO] [GO:0030154 "cell differentiation" evidence=ISO;IMP]
            [GO:0031016 "pancreas development" evidence=IMP] [GO:0031017
            "exocrine pancreas development" evidence=IMP] [GO:0031018
            "endocrine pancreas development" evidence=IMP] [GO:0032024
            "positive regulation of insulin secretion" evidence=ISO]
            [GO:0032403 "protein complex binding" evidence=ISO] [GO:0042127
            "regulation of cell proliferation" evidence=IDA] [GO:0042593
            "glucose homeostasis" evidence=ISO;IMP] [GO:0043388 "positive
            regulation of DNA binding" evidence=ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0046982
            "protein heterodimerization activity" evidence=ISO] [GO:0048565
            "digestive tract development" evidence=IMP] [GO:0048863 "stem cell
            differentiation" evidence=ISO] [GO:0051594 "detection of glucose"
            evidence=ISO] Reactome:REACT_13641 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:102851 GO:GO:0005829
            GO:GO:0008285 GO:GO:0005654 GO:GO:0030154 GO:GO:0008284
            GO:GO:0043565 GO:GO:0045944 GO:GO:0001889 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 GO:GO:0042593 GO:GO:0006006
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 Reactome:REACT_127416 GO:GO:0007263 GO:GO:0031018
            GO:GO:0016331 GO:GO:0048565 GO:GO:0030073 GO:GO:0031017
            GeneTree:ENSGT00700000104446 CTD:3651 eggNOG:NOG271681
            HOGENOM:HOG000115484 HOVERGEN:HBG004525 KO:K07594 OMA:PYEVPPI
            OrthoDB:EOG4M0F2P EMBL:X74342 EMBL:AK020261 EMBL:BC103572
            EMBL:BC103581 EMBL:BC103582 EMBL:BC105642 IPI:IPI00132557
            PIR:S39581 RefSeq:NP_032840.1 UniGene:Mm.389714
            ProteinModelPortal:P52946 SMR:P52946 MINT:MINT-3982089
            STRING:P52946 PhosphoSite:P52946 PRIDE:P52946
            Ensembl:ENSMUST00000085591 GeneID:18609 KEGG:mmu:18609
            UCSC:uc009any.2 InParanoid:Q3ZB03 NextBio:294534 Bgee:P52946
            CleanEx:MM_PDX1 Genevestigator:P52946 GermOnline:ENSMUSG00000029644
            Uniprot:P52946
        Length = 284

 Score = 156 (60.0 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A  L+LTER
Sbjct:   148 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 189


>UNIPROTKB|E1BBQ5 [details] [associations]
            symbol:PDX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048565 "digestive
            tract development" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0031018
            "endocrine pancreas development" evidence=IEA] [GO:0031017
            "exocrine pancreas development" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0030073 "insulin secretion"
            evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0007263 "nitric oxide
            mediated signal transduction" evidence=IEA] [GO:0006006 "glucose
            metabolic process" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104446 CTD:3651 KO:K07594 OMA:PYEVPPI
            EMBL:DAAA02033158 IPI:IPI00716405 RefSeq:NP_001179065.1
            UniGene:Bt.87929 PRIDE:E1BBQ5 Ensembl:ENSBTAT00000014141
            GeneID:538927 KEGG:bta:538927 NextBio:20877667 Uniprot:E1BBQ5
        Length = 285

 Score = 156 (60.0 bits), Expect = 4.8e-11, P = 4.8e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 120
             +R RTAYT  QLLELEKEF FNKY+ RPRR+E+A  L+LTER
Sbjct:   149 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTER 190


>UNIPROTKB|E1BQ69 [details] [associations]
            symbol:HOXA1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0007605 "sensory perception of sound"
            evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0021569 "rhombomere 3 development" evidence=IEA] [GO:0021570
            "rhombomere 4 development" evidence=IEA] [GO:0021571 "rhombomere 5
            development" evidence=IEA] [GO:0021599 "abducens nerve formation"
            evidence=IEA] [GO:0021612 "facial nerve structural organization"
            evidence=IEA] [GO:0021754 "facial nucleus development"
            evidence=IEA] [GO:0021953 "central nervous system neuron
            differentiation" evidence=IEA] [GO:0042473 "outer ear
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048702 "embryonic neurocranium morphogenesis" evidence=IEA]
            [GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0050795
            "regulation of behavior" evidence=IEA] [GO:0050890 "cognition"
            evidence=IEA] [GO:0050905 "neuromuscular process" evidence=IEA]
            [GO:0060876 "semicircular canal formation" evidence=IEA]
            [GO:0090103 "cochlea morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0050795 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 IPI:IPI00584066
            EMBL:AADN02000974 EMBL:AADN02000975 EMBL:AADN02000976
            Ensembl:ENSGALT00000018004 OMA:YNGICSK ArrayExpress:E1BQ69
            Uniprot:E1BQ69
        Length = 196

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 30/44 (68%), Positives = 33/44 (75%)

Query:    78 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             P  +RT +T  QL ELEKEFHFNKYL R RR+EIAASL L E Q
Sbjct:   139 PNTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 182


>UNIPROTKB|F1NMG1 [details] [associations]
            symbol:F1NMG1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00598309 OMA:PEQQYKS
            GeneTree:ENSGT00700000104332 EMBL:AADN02000982 EMBL:AADN02000983
            EMBL:AADN02071374 Ensembl:ENSGALT00000018011 Uniprot:F1NMG1
        Length = 228

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   154 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 196


>UNIPROTKB|P14838 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
            eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
            UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
            STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
            Uniprot:P14838
        Length = 82

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:     8 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 50


>UNIPROTKB|F1RWG8 [details] [associations]
            symbol:LOC100521817 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0021754 "facial nucleus development"
            evidence=IEA] [GO:0021612 "facial nerve structural organization"
            evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
            [GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
            GO:GO:0021612 GO:GO:0021571 GO:GO:0021754
            GeneTree:ENSGT00700000104161 KO:K09301 GO:GO:0021570 OMA:YAICNRG
            EMBL:CU856160 EMBL:CU570713 RefSeq:XP_003131593.1
            Ensembl:ENSSSCT00000019086 GeneID:100521817 KEGG:ssc:100521817
            Uniprot:F1RWG8
        Length = 301

 Score = 154 (59.3 bits), Expect = 9.8e-11, P = 9.8e-11
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  LRT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:   201 GAPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 246


>UNIPROTKB|E1BFZ7 [details] [associations]
            symbol:HOXB1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0021754 "facial nucleus development"
            evidence=IEA] [GO:0021612 "facial nerve structural organization"
            evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
            [GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
            GO:GO:0021612 GO:GO:0021571 GO:GO:0021754
            GeneTree:ENSGT00700000104161 KO:K09301 GO:GO:0021570 CTD:3211
            OMA:YAICNRG EMBL:DAAA02049068 IPI:IPI00714612 RefSeq:NP_001192883.1
            UniGene:Bt.112414 Ensembl:ENSBTAT00000009997 GeneID:528429
            KEGG:bta:528429 NextBio:20874821 Uniprot:E1BFZ7
        Length = 302

 Score = 154 (59.3 bits), Expect = 9.9e-11, P = 9.9e-11
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  LRT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:   202 GAPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 247


>UNIPROTKB|E2QT64 [details] [associations]
            symbol:HOXB1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0021754 "facial nucleus development"
            evidence=IEA] [GO:0021612 "facial nerve structural organization"
            evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
            [GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
            GO:GO:0021612 GO:GO:0021571 GO:GO:0021754
            GeneTree:ENSGT00700000104161 KO:K09301 GO:GO:0021570 CTD:3211
            OMA:YAICNRG EMBL:AAEX03006513 RefSeq:XP_548172.3
            Ensembl:ENSCAFT00000026658 GeneID:491052 KEGG:cfa:491052
            NextBio:20863953 Uniprot:E2QT64
        Length = 305

 Score = 154 (59.3 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 31/46 (67%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  LRT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:   205 GAPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 250


>UNIPROTKB|F1NH11 [details] [associations]
            symbol:HOXB1 "Homeobox protein Hox-B1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0021571
            "rhombomere 5 development" evidence=IEA] [GO:0021612 "facial nerve
            structural organization" evidence=IEA] [GO:0021754 "facial nucleus
            development" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048646 "anatomical structure formation involved in
            morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
            OMA:YAICNRG EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
            IPI:IPI01017071 Ensembl:ENSGALT00000021933 Uniprot:F1NH11
        Length = 307

 Score = 154 (59.3 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 30/46 (65%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:   209 GQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQ 254


>UNIPROTKB|P31259 [details] [associations]
            symbol:HOXB1 "Homeobox protein Hox-B1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG321520
            HOGENOM:HOG000247020 HOVERGEN:HBG006089 OrthoDB:EOG44F69X
            EMBL:X68352 EMBL:X68353 IPI:IPI00584134 PIR:A60096 UniGene:Gga.533
            ProteinModelPortal:P31259 SMR:P31259 STRING:P31259 PRIDE:P31259
            InParanoid:P31259 NextBio:20815965 Uniprot:P31259
        Length = 309

 Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 30/46 (65%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAA+L+L E Q
Sbjct:   211 GQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQ 256


>UNIPROTKB|P14839 [details] [associations]
            symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
            PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
        Length = 84

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 33/46 (71%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR R  YT  Q LELEKEFHFN+YL R RRIEIA SL LTERQ
Sbjct:     5 GPARRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQ 50


>MGI|MGI:96170 [details] [associations]
            symbol:Hoxa1 "homeobox A1" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0007605
            "sensory perception of sound" evidence=ISO] [GO:0007634
            "optokinetic behavior" evidence=ISO] [GO:0008045 "motor neuron axon
            guidance" evidence=IGI] [GO:0009653 "anatomical structure
            morphogenesis" evidence=ISO;IGI] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IGI;IMP] [GO:0021569 "rhombomere 3
            development" evidence=IGI;IMP] [GO:0021570 "rhombomere 4
            development" evidence=IGI;IMP] [GO:0021571 "rhombomere 5
            development" evidence=IGI;IMP] [GO:0021599 "abducens nerve
            formation" evidence=ISO] [GO:0021612 "facial nerve structural
            organization" evidence=IGI] [GO:0021754 "facial nucleus
            development" evidence=IMP] [GO:0021953 "central nervous system
            neuron differentiation" evidence=IMP] [GO:0030902 "hindbrain
            development" evidence=IMP] [GO:0042472 "inner ear morphogenesis"
            evidence=IMP] [GO:0042473 "outer ear morphogenesis" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048646 "anatomical
            structure formation involved in morphogenesis" evidence=IGI]
            [GO:0048702 "embryonic neurocranium morphogenesis" evidence=ISO]
            [GO:0048839 "inner ear development" evidence=ISO] [GO:0048844
            "artery morphogenesis" evidence=ISO] [GO:0050795 "regulation of
            behavior" evidence=ISO] [GO:0050890 "cognition" evidence=ISO]
            [GO:0050905 "neuromuscular process" evidence=ISO] [GO:0060840
            "artery development" evidence=ISO] [GO:0060876 "semicircular canal
            formation" evidence=ISO] [GO:0090102 "cochlea development"
            evidence=ISO] [GO:0090103 "cochlea morphogenesis" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:96170 GO:GO:0005634 GO:GO:0009952
            GO:GO:0050795 GO:GO:0050890 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008045 GO:GO:0042472
            GO:GO:0007605 GO:GO:0050905 GO:GO:0048844 GO:GO:0090103
            GO:GO:0021612 GO:GO:0042473 GO:GO:0021571 GO:GO:0021754
            eggNOG:NOG236971 HOVERGEN:HBG006089 OrthoDB:EOG47H5QN GO:GO:0021599
            GO:GO:0021953 GO:GO:0048702 GO:GO:0007634 GO:GO:0021569
            GO:GO:0021570 GO:GO:0060876 EMBL:M22115 EMBL:X06023 EMBL:X06024
            EMBL:M20214 EMBL:M20216 EMBL:M20215 IPI:IPI00132373 IPI:IPI00406332
            PIR:A27155 PIR:A30242 PIR:B30242 UniGene:Mm.197
            ProteinModelPortal:P09022 SMR:P09022 DIP:DIP-59869N IntAct:P09022
            STRING:P09022 PhosphoSite:P09022 PRIDE:P09022 HOGENOM:HOG000171545
            InParanoid:P09022 Bgee:P09022 CleanEx:MM_HOXA1
            Genevestigator:P09022 GermOnline:ENSMUSG00000029844 Uniprot:P09022
        Length = 331

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 31/46 (67%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAASL L E Q
Sbjct:   223 GQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 268


>UNIPROTKB|E1B918 [details] [associations]
            symbol:HOXA1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0090103 "cochlea
            morphogenesis" evidence=IEA] [GO:0060876 "semicircular canal
            formation" evidence=IEA] [GO:0050905 "neuromuscular process"
            evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0050795
            "regulation of behavior" evidence=IEA] [GO:0048844 "artery
            morphogenesis" evidence=IEA] [GO:0048702 "embryonic neurocranium
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0042473 "outer ear morphogenesis" evidence=IEA] [GO:0021953
            "central nervous system neuron differentiation" evidence=IEA]
            [GO:0021754 "facial nucleus development" evidence=IEA] [GO:0021612
            "facial nerve structural organization" evidence=IEA] [GO:0021599
            "abducens nerve formation" evidence=IEA] [GO:0021571 "rhombomere 5
            development" evidence=IEA] [GO:0021570 "rhombomere 4 development"
            evidence=IEA] [GO:0021569 "rhombomere 3 development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0008045 "motor neuron axon guidance"
            evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
            [GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0050795
            GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
            GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
            GO:GO:0021754 GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
            CTD:3198 GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634
            GO:GO:0021569 GO:GO:0021570 GO:GO:0060876 EMBL:DAAA02010939
            IPI:IPI00715521 RefSeq:NP_001193040.1 UniGene:Bt.112432
            Ensembl:ENSBTAT00000001367 GeneID:537889 KEGG:bta:537889
            NextBio:20877236 Uniprot:E1B918
        Length = 333

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 31/46 (67%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAASL L E Q
Sbjct:   225 GQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 270


>UNIPROTKB|E2R5Z1 [details] [associations]
            symbol:HOXA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090103
            "cochlea morphogenesis" evidence=IEA] [GO:0060876 "semicircular
            canal formation" evidence=IEA] [GO:0050905 "neuromuscular process"
            evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0050795
            "regulation of behavior" evidence=IEA] [GO:0048844 "artery
            morphogenesis" evidence=IEA] [GO:0048702 "embryonic neurocranium
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0042473 "outer ear morphogenesis" evidence=IEA] [GO:0021953
            "central nervous system neuron differentiation" evidence=IEA]
            [GO:0021754 "facial nucleus development" evidence=IEA] [GO:0021612
            "facial nerve structural organization" evidence=IEA] [GO:0021599
            "abducens nerve formation" evidence=IEA] [GO:0021571 "rhombomere 5
            development" evidence=IEA] [GO:0021570 "rhombomere 4 development"
            evidence=IEA] [GO:0021569 "rhombomere 3 development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0008045 "motor neuron axon guidance"
            evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
            [GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0050795
            GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
            GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
            GO:GO:0021754 GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
            CTD:3198 GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634
            GO:GO:0021569 GO:GO:0021570 GO:GO:0060876 EMBL:AAEX03009390
            RefSeq:XP_539484.2 Ensembl:ENSCAFT00000004700 GeneID:482367
            KEGG:cfa:482367 NextBio:20856979 Uniprot:E2R5Z1
        Length = 333

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 31/46 (67%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAASL L E Q
Sbjct:   225 GQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 270


>UNIPROTKB|G3V6R3 [details] [associations]
            symbol:Hoxa1 "Homeobox protein Hox-A1" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:2812 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
            UniGene:Rn.228589 UniGene:Rn.9780 EMBL:CH474011 EMBL:AC122669
            RefSeq:XP_003752224.1 Ensembl:ENSRNOT00000007807 GeneID:100911406
            KEGG:rno:100911406 Uniprot:G3V6R3
        Length = 334

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 31/46 (67%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAASL L E Q
Sbjct:   226 GQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 271


>UNIPROTKB|P49639 [details] [associations]
            symbol:HOXA1 "Homeobox protein Hox-A1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0008045 "motor neuron axon guidance"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0021569 "rhombomere 3 development"
            evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
            [GO:0021571 "rhombomere 5 development" evidence=IEA] [GO:0021612
            "facial nerve structural organization" evidence=IEA] [GO:0021754
            "facial nucleus development" evidence=IEA] [GO:0021953 "central
            nervous system neuron differentiation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0050905 "neuromuscular process" evidence=IDA] [GO:0007634
            "optokinetic behavior" evidence=IDA] [GO:0042473 "outer ear
            morphogenesis" evidence=IDA] [GO:0007605 "sensory perception of
            sound" evidence=IDA] [GO:0050890 "cognition" evidence=IDA]
            [GO:0050795 "regulation of behavior" evidence=IDA] [GO:0021599
            "abducens nerve formation" evidence=IMP] [GO:0048839 "inner ear
            development" evidence=IMP] [GO:0090103 "cochlea morphogenesis"
            evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
            [GO:0060876 "semicircular canal formation" evidence=IMP]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
            [GO:0048702 "embryonic neurocranium morphogenesis" evidence=IMP]
            [GO:0048844 "artery morphogenesis" evidence=IMP] [GO:0060840
            "artery development" evidence=IMP] [GO:0007275 "multicellular
            organismal development" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0050795 GO:GO:0050890 EMBL:CH471073 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 EMBL:CH236948
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
            GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
            GO:GO:0021754 eggNOG:NOG236971 KO:K09301 HOGENOM:HOG000247020
            HOVERGEN:HBG006089 OrthoDB:EOG47H5QN EMBL:U10421 EMBL:AK313514
            EMBL:AC004079 EMBL:BC032547 EMBL:U37431 EMBL:S79869 EMBL:S79871
            EMBL:S79910 IPI:IPI00027694 IPI:IPI00218317 IPI:IPI00218318
            PIR:G01448 RefSeq:NP_005513.1 RefSeq:NP_705873.2 UniGene:Hs.67397
            ProteinModelPortal:P49639 SMR:P49639 IntAct:P49639
            MINT:MINT-1437157 STRING:P49639 PhosphoSite:P49639 DMDM:6166216
            PRIDE:P49639 DNASU:3198 Ensembl:ENST00000343060 GeneID:3198
            KEGG:hsa:3198 UCSC:uc003syd.3 UCSC:uc003sye.3 UCSC:uc022aao.1
            CTD:3198 GeneCards:GC07M027099 HGNC:HGNC:5099 HPA:HPA004933
            MIM:142955 MIM:601536 neXtProt:NX_P49639 Orphanet:69739
            Orphanet:69737 PharmGKB:PA29376 InParanoid:P49639 BindingDB:P49639
            ChEMBL:CHEMBL4950 GenomeRNAi:3198 NextBio:12718 ArrayExpress:P49639
            Bgee:P49639 CleanEx:HS_HOXA1 Genevestigator:P49639
            GermOnline:ENSG00000105991 GO:GO:0021599 GO:GO:0021953
            GO:GO:0048702 GO:GO:0007634 GO:GO:0021569 GO:GO:0021570
            GO:GO:0060876 Uniprot:P49639
        Length = 335

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 31/46 (67%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAASL L E Q
Sbjct:   227 GQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 272


>UNIPROTKB|F1SHS9 [details] [associations]
            symbol:HOXA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090103 "cochlea
            morphogenesis" evidence=IEA] [GO:0060876 "semicircular canal
            formation" evidence=IEA] [GO:0050905 "neuromuscular process"
            evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0050795
            "regulation of behavior" evidence=IEA] [GO:0048844 "artery
            morphogenesis" evidence=IEA] [GO:0048702 "embryonic neurocranium
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0042473 "outer ear morphogenesis" evidence=IEA] [GO:0021953
            "central nervous system neuron differentiation" evidence=IEA]
            [GO:0021754 "facial nucleus development" evidence=IEA] [GO:0021612
            "facial nerve structural organization" evidence=IEA] [GO:0021599
            "abducens nerve formation" evidence=IEA] [GO:0021571 "rhombomere 5
            development" evidence=IEA] [GO:0021570 "rhombomere 4 development"
            evidence=IEA] [GO:0021569 "rhombomere 3 development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0008045 "motor neuron axon guidance"
            evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
            [GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0050795
            GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
            GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
            GO:GO:0021754 GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
            GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634
            GO:GO:0021569 GO:GO:0021570 GO:GO:0060876 EMBL:CU570959
            RefSeq:XP_003134892.1 Ensembl:ENSSSCT00000018188 GeneID:100520162
            KEGG:ssc:100520162 Uniprot:F1SHS9
        Length = 336

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 31/46 (67%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R RR+EIAASL L E Q
Sbjct:   228 GQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 273


>WB|WBGene00003024 [details] [associations]
            symbol:lin-39 species:6239 "Caenorhabditis elegans"
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
            "positive regulation of vulval development" evidence=IGI;IMP]
            [GO:0040027 "negative regulation of vulval development"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
            "cell migration" evidence=IMP] [GO:0007411 "axon guidance"
            evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
            [GO:0042659 "regulation of cell fate specification" evidence=IMP]
            [GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
            "plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
            signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IMP] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
            GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
            GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
            GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
            RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
            SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
            EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
            KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
            HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
            Uniprot:P34684
        Length = 253

 Score = 150 (57.9 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q+LELEKEFH +KYL R RRIE+A SL LTERQ
Sbjct:   166 KRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQ 208


>UNIPROTKB|E1BQ67 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0045446 "endothelial cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
            IPI:IPI00821744 Ensembl:ENSGALT00000018008 ArrayExpress:E1BQ67
            Uniprot:E1BQ67
        Length = 258

 Score = 150 (57.9 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   191 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 233


>UNIPROTKB|E1BZJ6 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0045446 "endothelial cell differentiation"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
            IPI:IPI00588353 Ensembl:ENSGALT00000021590 ArrayExpress:E1BZJ6
            Uniprot:E1BZJ6
        Length = 265

 Score = 150 (57.9 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   191 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 233


>UNIPROTKB|E2QT43 [details] [associations]
            symbol:HOXB5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045446
            "endothelial cell differentiation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
            GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW CTD:3215
            EMBL:AAEX03006516 RefSeq:XP_003435305.1 SMR:E2QT43
            Ensembl:ENSCAFT00000026675 GeneID:100686000 KEGG:cfa:100686000
            Uniprot:E2QT43
        Length = 269

 Score = 150 (57.9 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   195 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237


>UNIPROTKB|P09067 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0045446 "endothelial cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
            evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
            GO:GO:0048704 GO:GO:0045446 HOVERGEN:HBG016849 eggNOG:NOG236516
            HOGENOM:HOG000231178 KO:K09305 PIR:A24777 EMBL:AF287967 OMA:APQIFPW
            OrthoDB:EOG45MN66 EMBL:M92299 EMBL:AK314964 EMBL:BC117247
            EMBL:X03794 EMBL:K02572 EMBL:M86726 IPI:IPI00012514 PIR:A45578
            RefSeq:NP_002138.1 UniGene:Hs.654456 ProteinModelPortal:P09067
            SMR:P09067 IntAct:P09067 STRING:P09067 PhosphoSite:P09067
            DMDM:400000 PRIDE:P09067 Ensembl:ENST00000239151 GeneID:3215
            KEGG:hsa:3215 UCSC:uc002inr.3 CTD:3215 GeneCards:GC17M046668
            HGNC:HGNC:5116 MIM:142960 neXtProt:NX_P09067 PharmGKB:PA29392
            InParanoid:P09067 PhylomeDB:P09067 GenomeRNAi:3215 NextBio:12792
            Bgee:P09067 CleanEx:HS_HOXB5 Genevestigator:P09067
            GermOnline:ENSG00000120075 Uniprot:P09067
        Length = 269

 Score = 150 (57.9 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   195 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237


>UNIPROTKB|F1RWG0 [details] [associations]
            symbol:HOXB5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0045446
            "endothelial cell differentiation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
            GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW EMBL:CU856160
            RefSeq:XP_003131598.1 ProteinModelPortal:F1RWG0 SMR:F1RWG0
            Ensembl:ENSSSCT00000019094 GeneID:100522700 KEGG:ssc:100522700
            Uniprot:F1RWG0
        Length = 269

 Score = 150 (57.9 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   195 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237


>MGI|MGI:96186 [details] [associations]
            symbol:Hoxb5 "homeobox B5" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045446 "endothelial cell differentiation"
            evidence=IDA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI;IMP] [GO:0048706 "embryonic skeletal system
            development" evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96186 GO:GO:0005634
            GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
            GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849 eggNOG:NOG236516
            HOGENOM:HOG000231178 KO:K09305 OMA:APQIFPW OrthoDB:EOG45MN66
            CTD:3215 EMBL:M26283 EMBL:AK133512 EMBL:BC103595 EMBL:BC103596
            EMBL:BC103604 EMBL:BC103607 EMBL:L36070 EMBL:X03033 IPI:IPI00132538
            PIR:A43551 PIR:B24777 RefSeq:NP_032294.2 UniGene:Mm.207
            ProteinModelPortal:P09079 SMR:P09079 STRING:P09079
            PhosphoSite:P09079 PRIDE:P09079 Ensembl:ENSMUST00000049272
            GeneID:15413 KEGG:mmu:15413 InParanoid:P09079 NextBio:288138
            Bgee:P09079 CleanEx:MM_HOXB5 Genevestigator:P09079
            GermOnline:ENSMUSG00000038700 Uniprot:P09079
        Length = 269

 Score = 150 (57.9 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   195 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237


>RGD|1562292 [details] [associations]
            symbol:Hoxb5 "homeo box B5" species:10116 "Rattus norvegicus"
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045446 "endothelial cell
            differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic
            skeletal system development" evidence=ISO] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1562292
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048704 EMBL:CH473948 GO:GO:0045446
            GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW
            OrthoDB:EOG45MN66 CTD:3215 IPI:IPI00368860 RefSeq:NP_001178854.1
            UniGene:Rn.229521 SMR:D3ZMA1 Ensembl:ENSRNOT00000010724
            GeneID:497987 KEGG:rno:497987 UCSC:RGD:1562292 NextBio:698308
            Uniprot:D3ZMA1
        Length = 269

 Score = 150 (57.9 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   195 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237


>UNIPROTKB|Q6B3N0 [details] [associations]
            symbol:HOXA5 "Homeobox protein Hox-A5" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOVERGEN:HBG016849 eggNOG:NOG236516 CTD:3202
            KO:K09305 EMBL:AY686640 IPI:IPI00602185 RefSeq:XP_003640747.1
            RefSeq:XP_003640753.1 RefSeq:XP_003640770.1 UniGene:Gga.11995
            ProteinModelPortal:Q6B3N0 SMR:Q6B3N0 STRING:Q6B3N0 GeneID:100857257
            GeneID:100858404 GeneID:100858834 KEGG:gga:100857257
            KEGG:gga:100858404 KEGG:gga:100858834 Uniprot:Q6B3N0
        Length = 270

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 238


>UNIPROTKB|Q2HJ67 [details] [associations]
            symbol:HOXA5 "Homeobox protein Hox-A5" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
            signaling involved in mammary gland development" evidence=IEA]
            [GO:0060749 "mammary gland alveolus development" evidence=IEA]
            [GO:0060644 "mammary gland epithelial cell differentiation"
            evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
            evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
            evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
            evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
            evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
            development" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045647 "negative regulation of erythrocyte differentiation"
            evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
            differentiation" evidence=IEA] [GO:0043065 "positive regulation of
            apoptotic process" evidence=IEA] [GO:0035264 "multicellular
            organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
            gland epithelial cell proliferation" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0016525 "negative
            regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0003016 "respiratory system process"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
            GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
            GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
            GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
            GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
            eggNOG:NOG236516 HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677
            EMBL:BC113284 IPI:IPI00711374 RefSeq:NP_001070566.1
            UniGene:Bt.11342 ProteinModelPortal:Q2HJ67 SMR:Q2HJ67 PRIDE:Q2HJ67
            Ensembl:ENSBTAT00000016196 GeneID:768039 KEGG:bta:768039 CTD:3202
            InParanoid:Q2HJ67 KO:K09305 NextBio:20918394 GO:GO:0060435
            GO:GO:0060764 GO:GO:0060480 GO:GO:0060638 GO:GO:0060535
            Uniprot:Q2HJ67
        Length = 270

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 238


>UNIPROTKB|E2R5W8 [details] [associations]
            symbol:HOXA5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764
            "cell-cell signaling involved in mammary gland development"
            evidence=IEA] [GO:0060749 "mammary gland alveolus development"
            evidence=IEA] [GO:0060644 "mammary gland epithelial cell
            differentiation" evidence=IEA] [GO:0060638 "mesenchymal-epithelial
            cell signaling" evidence=IEA] [GO:0060574 "intestinal epithelial
            cell maturation" evidence=IEA] [GO:0060535 "trachea cartilage
            morphogenesis" evidence=IEA] [GO:0060484 "lung-associated
            mesenchyme development" evidence=IEA] [GO:0060480 "lung goblet cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0060435
            "bronchiole development" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045647 "negative regulation of erythrocyte
            differentiation" evidence=IEA] [GO:0045639 "positive regulation of
            myeloid cell differentiation" evidence=IEA] [GO:0043065 "positive
            regulation of apoptotic process" evidence=IEA] [GO:0035264
            "multicellular organism growth" evidence=IEA] [GO:0033599
            "regulation of mammary gland epithelial cell proliferation"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
            [GO:0016477 "cell migration" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003016
            "respiratory system process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
            GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
            GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
            GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
            GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202
            KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:AAEX03009390 RefSeq:XP_539487.2
            ProteinModelPortal:E2R5W8 SMR:E2R5W8 PRIDE:E2R5W8
            Ensembl:ENSCAFT00000004723 GeneID:482370 KEGG:cfa:482370
            NextBio:20856983 Uniprot:E2R5W8
        Length = 270

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 238


>UNIPROTKB|P20719 [details] [associations]
            symbol:HOXA5 "Homeobox protein Hox-A5" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003016 "respiratory system process" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0016477 "cell migration" evidence=IEA] [GO:0030878 "thyroid
            gland development" evidence=IEA] [GO:0033599 "regulation of mammary
            gland epithelial cell proliferation" evidence=IEA] [GO:0035264
            "multicellular organism growth" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
            development" evidence=IEA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IEA] [GO:0060480 "lung
            goblet cell differentiation" evidence=IEA] [GO:0060484
            "lung-associated mesenchyme development" evidence=IEA] [GO:0060535
            "trachea cartilage morphogenesis" evidence=IEA] [GO:0060574
            "intestinal epithelial cell maturation" evidence=IEA] [GO:0060638
            "mesenchymal-epithelial cell signaling" evidence=IEA] [GO:0060644
            "mammary gland epithelial cell differentiation" evidence=IEA]
            [GO:0060749 "mammary gland alveolus development" evidence=IEA]
            [GO:0060764 "cell-cell signaling involved in mammary gland
            development" evidence=IEA] [GO:0016525 "negative regulation of
            angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0043065 "positive regulation of
            apoptotic process" evidence=IDA] [GO:0010870 "positive regulation
            of receptor biosynthetic process" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0045639 "positive regulation of myeloid
            cell differentiation" evidence=IDA] [GO:0045647 "negative
            regulation of erythrocyte differentiation" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
            GO:GO:0009952 GO:GO:0003677 EMBL:CH471073 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 EMBL:CH236948
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
            GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
            GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
            GO:GO:0010870 EMBL:AC004080 GO:GO:0045639 GO:GO:0045647
            GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
            HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
            KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:M26679 EMBL:BT009744 EMBL:CR542256 EMBL:BC013682
            IPI:IPI00302291 PIR:A24777 PIR:A32799 RefSeq:NP_061975.2
            UniGene:Hs.655218 ProteinModelPortal:P20719 SMR:P20719
            STRING:P20719 PhosphoSite:P20719 DMDM:52788238 PRIDE:P20719
            DNASU:3202 Ensembl:ENST00000222726 GeneID:3202 KEGG:hsa:3202
            UCSC:uc003syn.2 GeneCards:GC07M027180 H-InvDB:HIX0201165
            HGNC:HGNC:5106 HPA:CAB032627 HPA:HPA029319 MIM:142952
            neXtProt:NX_P20719 PharmGKB:PA29383 InParanoid:P20719
            PhylomeDB:P20719 GenomeRNAi:3202 NextBio:12740 Bgee:P20719
            CleanEx:HS_HOXA5 Genevestigator:P20719 GermOnline:ENSG00000106004
            Uniprot:P20719
        Length = 270

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 238


>UNIPROTKB|E1U314 [details] [associations]
            symbol:Hoxa5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
            signaling involved in mammary gland development" evidence=IEA]
            [GO:0060749 "mammary gland alveolus development" evidence=IEA]
            [GO:0060644 "mammary gland epithelial cell differentiation"
            evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
            evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
            evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
            evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
            evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
            development" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045647 "negative regulation of erythrocyte differentiation"
            evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
            differentiation" evidence=IEA] [GO:0043065 "positive regulation of
            apoptotic process" evidence=IEA] [GO:0035264 "multicellular
            organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
            gland epithelial cell proliferation" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0016525 "negative
            regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0003016 "respiratory system process"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
            GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
            GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
            GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
            GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202 KO:K09305
            GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:CU570959 EMBL:EU914851 EMBL:EU914852
            RefSeq:NP_001182161.1 UniGene:Ssc.47987 Ensembl:ENSSSCT00000018184
            GeneID:100499568 KEGG:ssc:100499568 Uniprot:E1U314
        Length = 270

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 238


>MGI|MGI:96177 [details] [associations]
            symbol:Hoxa5 "homeobox A5" species:10090 "Mus musculus"
            [GO:0001501 "skeletal system development" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0003016
            "respiratory system process" evidence=IMP] [GO:0003677 "DNA
            binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IMP] [GO:0007585 "respiratory gaseous exchange"
            evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI;IMP] [GO:0010870 "positive regulation
            of receptor biosynthetic process" evidence=ISO] [GO:0016477 "cell
            migration" evidence=IMP] [GO:0016525 "negative regulation of
            angiogenesis" evidence=ISO] [GO:0030324 "lung development"
            evidence=IMP] [GO:0030878 "thyroid gland development" evidence=IMP]
            [GO:0033599 "regulation of mammary gland epithelial cell
            proliferation" evidence=IMP] [GO:0035264 "multicellular organism
            growth" evidence=IMP] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
            differentiation" evidence=ISO] [GO:0045647 "negative regulation of
            erythrocyte differentiation" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IDA] [GO:0048286 "lung alveolus development"
            evidence=IMP] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IMP] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI] [GO:0060435 "bronchiole development" evidence=IMP]
            [GO:0060439 "trachea morphogenesis" evidence=IMP] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IMP] [GO:0060480 "lung goblet cell differentiation"
            evidence=IMP] [GO:0060481 "lobar bronchus epithelium development"
            evidence=IMP] [GO:0060484 "lung-associated mesenchyme development"
            evidence=IMP] [GO:0060535 "trachea cartilage morphogenesis"
            evidence=IMP] [GO:0060536 "cartilage morphogenesis" evidence=IMP]
            [GO:0060574 "intestinal epithelial cell maturation" evidence=IMP]
            [GO:0060638 "mesenchymal-epithelial cell signaling" evidence=IMP]
            [GO:0060644 "mammary gland epithelial cell differentiation"
            evidence=IMP] [GO:0060749 "mammary gland alveolus development"
            evidence=IMP] [GO:0060764 "cell-cell signaling involved in mammary
            gland development" evidence=IMP] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96177
            GO:GO:0005634 GO:GO:0016477 GO:GO:0009952 GO:GO:0003677
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
            GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
            GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
            GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
            GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
            HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
            KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:M36604 EMBL:Y00208 EMBL:X16840 EMBL:M28021
            EMBL:BC011063 IPI:IPI00132371 PIR:S07812 RefSeq:NP_034583.1
            UniGene:Mm.173 ProteinModelPortal:P09021 SMR:P09021 IntAct:P09021
            STRING:P09021 PhosphoSite:P09021 PaxDb:P09021 PRIDE:P09021
            Ensembl:ENSMUST00000048794 GeneID:15402 KEGG:mmu:15402
            UCSC:uc009byh.1 InParanoid:P09021 NextBio:288102 Bgee:P09021
            CleanEx:MM_HOXA5 Genevestigator:P09021
            GermOnline:ENSMUSG00000038253 Uniprot:P09021
        Length = 270

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 238


>RGD|6492497 [details] [associations]
            symbol:LOC100911546 "homeobox protein Hox-A5-like" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
            UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
            RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
            SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
            GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
            KEGG:rno:79241 Uniprot:G3V6T2
        Length = 270

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 238


>RGD|6502805 [details] [associations]
            symbol:LOC100909641 "homeobox protein Hox-A5-like" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
            UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
            RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
            SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
            GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
            KEGG:rno:79241 Uniprot:G3V6T2
        Length = 270

 Score = 150 (57.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 238


>ZFIN|ZDB-GENE-980526-70 [details] [associations]
            symbol:hoxb5a "homeo box B5a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007420 "brain development" evidence=IMP] [GO:0001708 "cell
            fate specification" evidence=IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-70 GO:GO:0005634
            GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849
            eggNOG:NOG236516 HOGENOM:HOG000231178 KO:K09305 EMBL:AL645782
            EMBL:X12802 EMBL:X68248 EMBL:BC071493 EMBL:DQ060540 EMBL:X07381
            IPI:IPI00493376 PIR:S03671 RefSeq:NP_571176.2 UniGene:Dr.35792
            ProteinModelPortal:P09014 SMR:P09014 Ensembl:ENSDART00000025449
            GeneID:30317 KEGG:dre:30317 CTD:30317 InParanoid:P09014 OMA:APQIFPW
            OrthoDB:EOG45MN66 NextBio:20806756 Bgee:P09014 Uniprot:P09014
        Length = 275

 Score = 150 (57.9 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   201 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 243


>ZFIN|ZDB-GENE-000823-6 [details] [associations]
            symbol:hoxb5b "homeo box B5b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0010002 "cardioblast differentiation" evidence=IMP] [GO:0007420
            "brain development" evidence=IMP] [GO:0001708 "cell fate
            specification" evidence=IMP] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-6 GO:GO:0005634
            GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0010002 GeneTree:ENSGT00700000104189
            HOVERGEN:HBG016849 eggNOG:NOG236516 HOGENOM:HOG000231178
            EMBL:AL645798 OrthoDB:EOG45MN66 EMBL:AF071253 EMBL:BC078285
            EMBL:DQ060547 EMBL:X12803 EMBL:Y14526 IPI:IPI00489481
            RefSeq:NP_571612.2 UniGene:Dr.75783 ProteinModelPortal:P09013
            SMR:P09013 Ensembl:ENSDART00000076161 GeneID:58052 KEGG:dre:58052
            CTD:58052 InParanoid:P09013 NextBio:20892316 Bgee:P09013
            Uniprot:P09013
        Length = 276

 Score = 150 (57.9 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   202 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 244


>ZFIN|ZDB-GENE-980526-532 [details] [associations]
            symbol:hoxc3a "homeo box C3a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-532
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 HOGENOM:HOG000252944 EMBL:BX005254
            EMBL:BC095299 EMBL:BC165158 IPI:IPI00931602 UniGene:Dr.132202
            UniGene:Dr.510 SMR:Q503K0 Ensembl:ENSDART00000082472
            HOVERGEN:HBG096057 InParanoid:Q503K0 Uniprot:Q503K0
        Length = 254

 Score = 148 (57.2 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R A+T++QLLELEKEFHF+ YLCR RR+E+A  L LT+RQ
Sbjct:   150 KRARVAFTSSQLLELEKEFHFSAYLCRNRRLEMAELLKLTDRQ 192


>FB|FBgn0000439 [details] [associations]
            symbol:Dfd "Deformed" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007420 "brain
            development" evidence=IMP] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0033613 "activating transcription factor binding"
            evidence=IPI] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS;TAS] [GO:0007380 "specification of segmental identity,
            head" evidence=NAS] [GO:0060322 "head development" evidence=IMP]
            [GO:0006917 "induction of apoptosis" evidence=IGI;IMP] [GO:0048598
            "embryonic morphogenesis" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0000977 "RNA
            polymerase II regulatory region sequence-specific DNA binding"
            evidence=IDA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
            GO:GO:0005634 GO:GO:0007420 GO:GO:0006917 GO:GO:0048598
            GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0003705
            GO:GO:0000122 EMBL:AE001572 GO:GO:0000977 GO:GO:0060322 EMBL:X05136
            EMBL:M13373 PIR:A26638 RefSeq:NP_477201.1 UniGene:Dm.5282
            ProteinModelPortal:P07548 SMR:P07548 DIP:DIP-18055N IntAct:P07548
            MINT:MINT-858733 STRING:P07548 EnsemblMetazoa:FBtr0081621
            GeneID:40832 KEGG:dme:Dmel_CG2189 UCSC:CG2189-RA CTD:40832
            FlyBase:FBgn0000439 eggNOG:NOG314883 HOGENOM:HOG000290519
            InParanoid:P07548 KO:K09304 OMA:DLMAETT OrthoDB:EOG49CNQM
            PhylomeDB:P07548 GenomeRNAi:40832 NextBio:820832 Bgee:P07548
            GermOnline:CG2189 Uniprot:P07548
        Length = 586

 Score = 156 (60.0 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 31/44 (70%), Positives = 37/44 (84%)

Query:    78 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             P+R RTAYT  Q+LELEKEFH+N+YL R RRIEIA +L L+ERQ
Sbjct:   366 PKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQ 409


>UNIPROTKB|B0W1V2 [details] [associations]
            symbol:abd-A "Homeobox protein abdominal-A homolog"
            species:7176 "Culex quinquefasciatus" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
            pattern specification" evidence=ISS] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
            OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
            InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
            SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
            KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
            PhylomeDB:B0W1V2 Uniprot:B0W1V2
        Length = 216

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 33/47 (70%), Positives = 34/47 (72%)

Query:    76 GLPRRL-RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G PRR  R  YT  Q LELEKEFHFN YL R RRIEIA +L LTERQ
Sbjct:    40 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 86


>RGD|620609 [details] [associations]
            symbol:Hoxa5 "homeo box A5" species:10116 "Rattus norvegicus"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
            GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
            GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
            GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
            GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
            GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
            eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
            GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
            UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
            PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
            GermOnline:ENSRNOG00000006466 Uniprot:P52949
        Length = 233

 Score = 146 (56.5 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT YT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   175 KRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 217


>UNIPROTKB|P52949 [details] [associations]
            symbol:Hoxa5 "Homeobox protein Hox-A5" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
            GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
            GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
            GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
            GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
            GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
            eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
            GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
            UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
            PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
            GermOnline:ENSRNOG00000006466 Uniprot:P52949
        Length = 233

 Score = 146 (56.5 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT YT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   175 KRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 217


>ZFIN|ZDB-GENE-000823-9 [details] [associations]
            symbol:hoxa5a "homeo box A5a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-000823-9 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
            EMBL:CR382300 HOVERGEN:HBG016849 EMBL:AF071247 EMBL:DQ060534
            IPI:IPI00485489 RefSeq:NP_571615.1 UniGene:Dr.134275
            ProteinModelPortal:Q9YGT6 SMR:Q9YGT6 Ensembl:ENSDART00000003506
            GeneID:58055 KEGG:dre:58055 CTD:58055 eggNOG:NOG236516
            HOGENOM:HOG000231178 InParanoid:Q9YGT6 OMA:YRDSASM
            OrthoDB:EOG49S677 NextBio:20892319 ArrayExpress:Q9YGT6 Bgee:Q9YGT6
            Uniprot:Q9YGT6
        Length = 265

 Score = 148 (57.2 bits), Expect = 2.9e-10, P = 2.9e-10
 Identities = 31/43 (72%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKEFHFN+YL R RRIEIA +L L+ERQ
Sbjct:   191 KRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 233


>UNIPROTKB|P29552 [details] [associations]
            symbol:abd-A "Homeobox protein abdominal-A homolog"
            species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
            RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
            EnsemblMetazoa:AAEL009742-RA GeneID:5572355
            KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
            InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
            Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
            Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
        Length = 239

 Score = 146 (56.5 bits), Expect = 3.1e-10, P = 3.1e-10
 Identities = 33/47 (70%), Positives = 34/47 (72%)

Query:    76 GLPRRL-RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G PRR  R  YT  Q LELEKEFHFN YL R RRIEIA +L LTERQ
Sbjct:    18 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 64


>UNIPROTKB|E1BHR6 [details] [associations]
            symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0030054 "cell
            junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
            OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
            UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
            KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
        Length = 222

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT+YT  Q LELEKEFHFN+YL R RRIEIA +L L ERQ
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198


>UNIPROTKB|J9P833 [details] [associations]
            symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
            OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
            Ensembl:ENSCAFT00000049441 Uniprot:J9P833
        Length = 222

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT+YT  Q LELEKEFHFN+YL R RRIEIA +L L ERQ
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198


>UNIPROTKB|Q00444 [details] [associations]
            symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
            HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
            IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
            ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
            PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
            Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
            CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
            MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
            InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
            GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
            GermOnline:ENSG00000172789 Uniprot:Q00444
        Length = 222

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT+YT  Q LELEKEFHFN+YL R RRIEIA +L L ERQ
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198


>UNIPROTKB|I3LRP3 [details] [associations]
            symbol:LOC100627840 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
            "embryonic skeletal system development" evidence=IEA] [GO:0030054
            "cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
            EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
            SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
            GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
            KEGG:ssc:100627840 Uniprot:I3LRP3
        Length = 222

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT+YT  Q LELEKEFHFN+YL R RRIEIA +L L ERQ
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198


>MGI|MGI:96196 [details] [associations]
            symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
            HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
            eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
            EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
            PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
            ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
            PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
            GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
            NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
            GermOnline:ENSMUSG00000022485 Uniprot:P32043
        Length = 222

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT+YT  Q LELEKEFHFN+YL R RRIEIA +L L ERQ
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198


>RGD|1307584 [details] [associations]
            symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
            GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
            OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
            RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
            Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
            NextBio:669109 Uniprot:D3ZP88
        Length = 222

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT+YT  Q LELEKEFHFN+YL R RRIEIA +L L ERQ
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198


>ZFIN|ZDB-GENE-980526-533 [details] [associations]
            symbol:hoxc5a "homeo box C5a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-533 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 HOVERGEN:HBG016849
            HOGENOM:HOG000231178 EMBL:BX005254 EMBL:BC163205 IPI:IPI00499962
            UniGene:Dr.132198 Ensembl:ENSDART00000103038 Uniprot:B3DIP7
        Length = 233

 Score = 145 (56.1 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 30/43 (69%), Positives = 34/43 (79%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RT+YT  Q LELEKEFHFN+YL R RRIEIA +L L ERQ
Sbjct:   167 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 209


>ZFIN|ZDB-GENE-000823-5 [details] [associations]
            symbol:hoxa1a "homeo box A1a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-000823-5 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 eggNOG:NOG236971 KO:K09301
            EMBL:AJ306430 EMBL:AJ306431 EMBL:AF071243 EMBL:AL645756
            EMBL:CR382300 EMBL:DQ060531 IPI:IPI00494329 IPI:IPI00494805
            RefSeq:NP_571611.1 UniGene:Dr.83046 ProteinModelPortal:Q98SI1
            SMR:Q98SI1 STRING:Q98SI1 Ensembl:ENSDART00000080456
            Ensembl:ENSDART00000080461 GeneID:58051 KEGG:dre:58051 CTD:58051
            HOGENOM:HOG000247020 HOVERGEN:HBG006089 InParanoid:Q98SI1
            OMA:RAYPSDH OrthoDB:EOG47H5QN NextBio:20892315 ArrayExpress:Q98SI1
            Bgee:Q98SI1 Uniprot:Q98SI1
        Length = 329

 Score = 150 (57.9 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 30/46 (65%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT ++  QL ELEKEFHFNKYL R RR+EIAASL L E Q
Sbjct:   223 GQPNTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 268


>FB|FBgn0003339 [details] [associations]
            symbol:Scr "Sex combs reduced" species:7227 "Drosophila
            melanogaster" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS;NAS] [GO:0007494 "midgut development" evidence=TAS]
            [GO:0007379 "segment specification" evidence=NAS] [GO:0007381
            "specification of segmental identity, labial segment" evidence=TAS]
            [GO:0045498 "sex comb development" evidence=IMP;NAS] [GO:0007548
            "sex differentiation" evidence=TAS] [GO:0007432 "salivary gland
            boundary specification" evidence=NAS;TAS] [GO:0000977 "RNA
            polymerase II regulatory region sequence-specific DNA binding"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0042803 "protein homodimerization activity"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
            GO:GO:0042803 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0007494 EMBL:AE001572
            GO:GO:0007548 GO:GO:0000977 GO:GO:0045498 GO:GO:0007432 PDB:2R5Y
            PDB:2R5Z PDBsum:2R5Y PDBsum:2R5Z GO:GO:0007381 eggNOG:NOG236516
            ChiTaRS:scrib EMBL:X14475 EMBL:X77075 EMBL:X77076 EMBL:U10506
            EMBL:X05228 PIR:S03631 RefSeq:NP_524248.2 RefSeq:NP_996165.1
            ProteinModelPortal:P09077 SMR:P09077 DIP:DIP-40017N IntAct:P09077
            STRING:P09077 EnsemblMetazoa:FBtr0081657 EnsemblMetazoa:FBtr0081658
            GeneID:40833 KEGG:dme:Dmel_CG1030 CTD:109559 FlyBase:FBgn0003339
            InParanoid:P09077 OMA:ISCKYAN OrthoDB:EOG4H44KH PhylomeDB:P09077
            EvolutionaryTrace:P09077 GenomeRNAi:40833 NextBio:820837
            Bgee:P09077 GermOnline:CG1030 Uniprot:P09077
        Length = 417

 Score = 152 (58.6 bits), Expect = 3.6e-10, P = 3.6e-10
 Identities = 32/46 (69%), Positives = 36/46 (78%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  +R RT+YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   322 GETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 367


>ZFIN|ZDB-GENE-990415-106 [details] [associations]
            symbol:hoxb6a "homeo box B6a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-106 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
            HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AL645782
            EMBL:X68248 EMBL:X17267 EMBL:DQ060541 IPI:IPI00512770 PIR:S32563
            RefSeq:NP_571194.1 UniGene:Dr.132967 ProteinModelPortal:P15861
            SMR:P15861 GeneID:30341 KEGG:dre:30341 CTD:30341 InParanoid:P15861
            OrthoDB:EOG4G7C0G NextBio:20806772 ArrayExpress:P15861
            Uniprot:P15861
        Length = 228

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 31/43 (72%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   151 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 193


>UNIPROTKB|Q5YLH5 [details] [associations]
            symbol:HOXA6 "Homeobox protein Hox-A6" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG238660 HOVERGEN:HBG016849 EMBL:AY307380
            IPI:IPI00598309 RefSeq:NP_001026158.1 RefSeq:XP_003640784.1
            UniGene:Gga.22376 ProteinModelPortal:Q5YLH5 SMR:Q5YLH5
            GeneID:100857163 GeneID:420630 KEGG:gga:100857163 KEGG:gga:420630
            CTD:3203 KO:K09306 NextBio:20823516 Uniprot:Q5YLH5
        Length = 231

 Score = 144 (55.7 bits), Expect = 4.3e-10, P = 4.3e-10
 Identities = 31/43 (72%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   154 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 196


>MGI|MGI:96178 [details] [associations]
            symbol:Hoxa6 "homeobox A6" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IMP] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96178 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 GO:GO:0048704 HOVERGEN:HBG016849 CTD:3203
            KO:K09306 eggNOG:NOG305812 OMA:PEQQYKS OrthoDB:EOG4C5CKB
            EMBL:AF247663 EMBL:M11988 IPI:IPI00132603 PIR:A24779
            RefSeq:NP_034584.1 UniGene:Mm.222030 ProteinModelPortal:P09092
            SMR:P09092 STRING:P09092 PhosphoSite:P09092 PRIDE:P09092
            Ensembl:ENSMUST00000062829 GeneID:15403 KEGG:mmu:15403
            InParanoid:P09092 NextBio:288106 Bgee:P09092 CleanEx:MM_HOXA6
            Genevestigator:P09092 GermOnline:ENSMUSG00000043219 Uniprot:P09092
        Length = 232

 Score = 144 (55.7 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 31/43 (72%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   155 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 197


>UNIPROTKB|E2R5W2 [details] [associations]
            symbol:HOXA6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 CTD:3203 KO:K09306
            OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:AAEX03009390
            RefSeq:XP_854141.1 ProteinModelPortal:E2R5W2
            Ensembl:ENSCAFT00000004729 GeneID:611383 KEGG:cfa:611383
            NextBio:20896920 Uniprot:E2R5W2
        Length = 233

 Score = 144 (55.7 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 31/43 (72%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   156 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 198


>UNIPROTKB|P31267 [details] [associations]
            symbol:HOXA6 "Homeobox protein Hox-A6" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 GO:GO:0048704 EMBL:AC004080 HOVERGEN:HBG016849
            CTD:3203 KO:K09306 EMBL:BC069497 EMBL:BC104915 EMBL:BC104917
            IPI:IPI00010742 PIR:S15538 RefSeq:NP_076919.1 UniGene:Hs.679517
            ProteinModelPortal:P31267 SMR:P31267 STRING:P31267
            PhosphoSite:P31267 DMDM:17378385 PRIDE:P31267 DNASU:3203
            Ensembl:ENST00000222728 GeneID:3203 KEGG:hsa:3203 UCSC:uc003syo.2
            GeneCards:GC07M027185 HGNC:HGNC:5107 HPA:HPA004203 MIM:142951
            neXtProt:NX_P31267 PharmGKB:PA29384 eggNOG:NOG305812
            InParanoid:P31267 OMA:PEQQYKS OrthoDB:EOG4C5CKB PhylomeDB:P31267
            GenomeRNAi:3203 NextBio:12744 Bgee:P31267 CleanEx:HS_HOXA6
            Genevestigator:P31267 GermOnline:ENSG00000106006 Uniprot:P31267
        Length = 233

 Score = 144 (55.7 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 31/43 (72%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   156 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 198


>UNIPROTKB|F1SHT3 [details] [associations]
            symbol:HOXA6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 KO:K09306 OMA:PEQQYKS
            GeneTree:ENSGT00700000104332 EMBL:CU570959 RefSeq:XP_003134887.1
            Ensembl:ENSSSCT00000018183 GeneID:100519284 KEGG:ssc:100519284
            Uniprot:F1SHT3
        Length = 233

 Score = 144 (55.7 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 31/43 (72%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   156 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 198


>RGD|1590236 [details] [associations]
            symbol:Hoxa6 "homeobox A6" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=ISO] [GO:0048706 "embryonic skeletal system development"
            evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:1590236 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 CTD:3203
            KO:K09306 OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:CH474011
            EMBL:AC122669 RefSeq:NP_001178016.1 RefSeq:XP_003749802.1
            RefSeq:XP_003752227.1 UniGene:Rn.213374 Ensembl:ENSRNOT00000008542
            GeneID:100909604 GeneID:100911511 GeneID:685732 KEGG:rno:100909604
            KEGG:rno:100911511 KEGG:rno:685732 NextBio:730342 Uniprot:G3V6T4
        Length = 233

 Score = 144 (55.7 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 31/43 (72%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   156 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 198


>UNIPROTKB|E1B7T2 [details] [associations]
            symbol:LOC100848736 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 OMA:PEQQYKS
            GeneTree:ENSGT00700000104332 EMBL:DAAA02010938 IPI:IPI00708268
            Ensembl:ENSBTAT00000033679 Uniprot:E1B7T2
        Length = 249

 Score = 144 (55.7 bits), Expect = 6.5e-10, P = 6.5e-10
 Identities = 31/43 (72%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   156 RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 198


>UNIPROTKB|O76762 [details] [associations]
            symbol:abd-A "Homeobox protein abdominal-A homolog"
            species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
            Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
            Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
            EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
            ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
            GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
            CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
        Length = 308

 Score = 146 (56.5 bits), Expect = 8.2e-10, P = 8.2e-10
 Identities = 33/47 (70%), Positives = 34/47 (72%)

Query:    76 GLPRRL-RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G PRR  R  YT  Q LELEKEFHFN YL R RRIEIA +L LTERQ
Sbjct:   135 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 181


>UNIPROTKB|F1NLW0 [details] [associations]
            symbol:LOC100858514 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
            Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
        Length = 187

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:    98 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 140


>UNIPROTKB|Q90VZ9 [details] [associations]
            symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
            HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
            RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
            UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
            GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
            KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
            KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
        Length = 219

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   130 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 172


>UNIPROTKB|E2QT40 [details] [associations]
            symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 KO:K09306 CTD:3216 RefSeq:XP_003435306.1
            ProteinModelPortal:E2QT40 Ensembl:ENSCAFT00000026682 GeneID:491056
            KEGG:cfa:491056 NextBio:20863955 Uniprot:E2QT40
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   147 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 189


>UNIPROTKB|P17509 [details] [associations]
            symbol:HOXB6 "Homeobox protein Hox-B6" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0034101 "erythrocyte homeostasis" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] [GO:0008595
            "anterior/posterior axis specification, embryo" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0048704 GO:GO:0034101
            HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AF287967
            OrthoDB:EOG4G7C0G EMBL:X58431 EMBL:AJ270993 EMBL:AK292200
            EMBL:BC014651 EMBL:M30597 EMBL:K02571 IPI:IPI00015075
            IPI:IPI00216597 PIR:A05266 PIR:S26400 RefSeq:NP_061825.2
            UniGene:Hs.98428 ProteinModelPortal:P17509 SMR:P17509 IntAct:P17509
            MINT:MINT-1437085 STRING:P17509 PhosphoSite:P17509 DMDM:116242515
            PRIDE:P17509 DNASU:3216 Ensembl:ENST00000225648
            Ensembl:ENST00000484302 GeneID:3216 KEGG:hsa:3216 UCSC:uc002ins.1
            UCSC:uc002int.1 CTD:3216 GeneCards:GC17M046673 HGNC:HGNC:5117
            HPA:HPA042063 MIM:142961 neXtProt:NX_P17509 PharmGKB:PA29393
            InParanoid:P17509 OMA:AEGSCAF PhylomeDB:P17509 GenomeRNAi:3216
            NextBio:12796 Bgee:P17509 CleanEx:HS_HOXB6 Genevestigator:P17509
            GermOnline:ENSG00000108511 Uniprot:P17509
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   147 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 189


>UNIPROTKB|F1RWG1 [details] [associations]
            symbol:HOXB6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0034101
            "erythrocyte homeostasis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0034101
            KO:K09306 OMA:AEGSCAF GeneTree:ENSGT00700000104332 EMBL:CU856160
            RefSeq:XP_003358123.1 Ensembl:ENSSSCT00000019093 GeneID:100627849
            KEGG:ssc:100627849 Uniprot:F1RWG1
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   147 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 189


>MGI|MGI:96187 [details] [associations]
            symbol:Hoxb6 "homeobox B6" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0034101 "erythrocyte homeostasis"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96187 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0034101 HOVERGEN:HBG016849
            KO:K09306 eggNOG:NOG305812 OrthoDB:EOG4G7C0G CTD:3216 EMBL:M18166
            EMBL:X56459 EMBL:BC016893 EMBL:M18401 EMBL:J03782 IPI:IPI00132375
            PIR:A31324 PIR:B29585 PIR:C27176 RefSeq:NP_032295.1 UniGene:Mm.215
            ProteinModelPortal:P09023 SMR:P09023 DIP:DIP-59870N STRING:P09023
            PhosphoSite:P09023 PaxDb:P09023 PRIDE:P09023
            Ensembl:ENSMUST00000000704 Ensembl:ENSMUST00000173432 GeneID:15414
            KEGG:mmu:15414 GeneTree:ENSGT00700000104332 InParanoid:P09023
            OMA:FVNSSFP NextBio:288142 Bgee:P09023 CleanEx:MM_HOXB6
            Genevestigator:P09023 GermOnline:ENSMUSG00000000690 Uniprot:P09023
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   147 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 189


>RGD|1562142 [details] [associations]
            symbol:Hoxb6 "homeo box B6" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA;ISO] [GO:0034101 "erythrocyte homeostasis"
            evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
            development" evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:1562142 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
            EMBL:CH473948 GO:GO:0034101 KO:K09306 OrthoDB:EOG4G7C0G CTD:3216
            GeneTree:ENSGT00700000104332 OMA:FVNSSFP IPI:IPI00196016
            RefSeq:XP_003752419.1 RefSeq:XP_573182.1 SMR:D3ZLU8
            Ensembl:ENSRNOT00000010527 GeneID:497986 KEGG:rno:497986
            UCSC:RGD:1562142 NextBio:698302 Uniprot:D3ZLU8
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   147 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 189


>ZFIN|ZDB-GENE-000823-7 [details] [associations]
            symbol:hoxb6b "homeo box B6b" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-000823-7 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
            HOVERGEN:HBG016849 eggNOG:NOG305812 EMBL:AL645798 OrthoDB:EOG4G7C0G
            EMBL:AF071254 EMBL:DQ060548 EMBL:Y14532 IPI:IPI00481961
            UniGene:Dr.59927 ProteinModelPortal:Q9YGT4 SMR:Q9YGT4 STRING:Q9YGT4
            InParanoid:Q9YGT4 ArrayExpress:Q9YGT4 Uniprot:Q9YGT4
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFHFN+YL R RRIEI+ +L LTERQ
Sbjct:   148 RRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQ 190


>FB|FBgn0004054 [details] [associations]
            symbol:zen2 "zerknullt-related" species:7227 "Drosophila
            melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0007450
            "dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AE014297 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 EMBL:AE001572
            eggNOG:NOG325574 ChiTaRS:br GeneTree:ENSGT00700000104161
            EMBL:X68348 PIR:B43697 RefSeq:NP_476794.1 UniGene:Dm.27226
            ProteinModelPortal:P09090 SMR:P09090 EnsemblMetazoa:FBtr0081671
            GeneID:40827 KEGG:dme:Dmel_CG1048 CTD:40827 FlyBase:FBgn0004054
            InParanoid:P09090 OMA:CWDSNSS OrthoDB:EOG4KD53G PhylomeDB:P09090
            GenomeRNAi:40827 NextBio:820795 Bgee:P09090 GermOnline:CG1048
            Uniprot:P09090
        Length = 252

 Score = 143 (55.4 bits), Expect = 9.0e-10, P = 9.0e-10
 Identities = 28/43 (65%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTA+++ QL+ELE+EFH NKYL R RRIEI+  L LTERQ
Sbjct:    44 KRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQ 86


>MGI|MGI:96179 [details] [associations]
            symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
            regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
            "negative regulation of leukocyte migration" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
            differentiation" evidence=ISO] [GO:0045656 "negative regulation of
            monocyte differentiation" evidence=ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
            differentiation" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
            GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
            GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
            GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
            KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
            EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
            IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
            UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
            IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
            Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
            UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
            CleanEx:MM_HOXA7 Genevestigator:P02830
            GermOnline:ENSMUSG00000038236 Uniprot:P02830
        Length = 229

 Score = 141 (54.7 bits), Expect = 9.4e-10, P = 9.4e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   130 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 172


>UNIPROTKB|P31268 [details] [associations]
            symbol:HOXA7 "Homeobox protein Hox-A7" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0048863 "stem cell differentiation" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IPI] [GO:0001525
            "angiogenesis" evidence=IEP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IC] [GO:0002686 "negative regulation of leukocyte
            migration" evidence=IDA] [GO:0045656 "negative regulation of
            monocyte differentiation" evidence=IDA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0001953 "negative regulation of cell-matrix
            adhesion" evidence=IDA] [GO:0045617 "negative regulation of
            keratinocyte differentiation" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0045944
            GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
            GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122
            GO:GO:0001953 GO:GO:0048704 eggNOG:NOG238660 EMBL:AC004080
            HOVERGEN:HBG016849 CTD:3204 KO:K09307 EMBL:AF026397 EMBL:AJ005814
            EMBL:AF032095 EMBL:X84803 EMBL:X84804 EMBL:U92543 IPI:IPI00010743
            PIR:S15536 RefSeq:NP_008827.2 UniGene:Hs.610216 UniGene:Hs.660918
            ProteinModelPortal:P31268 SMR:P31268 IntAct:P31268 STRING:P31268
            PhosphoSite:P31268 DMDM:311033439 PRIDE:P31268 DNASU:3204
            Ensembl:ENST00000242159 GeneID:3204 KEGG:hsa:3204 UCSC:uc003sys.3
            GeneCards:GC07M027193 HGNC:HGNC:5108 MIM:142950 neXtProt:NX_P31268
            PharmGKB:PA29385 InParanoid:P31268 OMA:EHKDEGP OrthoDB:EOG4C87V5
            PhylomeDB:P31268 GenomeRNAi:3204 NextBio:12748 ArrayExpress:P31268
            Bgee:P31268 CleanEx:HS_HOXA7 Genevestigator:P31268
            GermOnline:ENSG00000122592 GO:GO:0045617 GO:GO:0045656
            Uniprot:P31268
        Length = 230

 Score = 141 (54.7 bits), Expect = 9.6e-10, P = 9.6e-10
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   131 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 173


>UNIPROTKB|F6UVZ9 [details] [associations]
            symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 OMA:AEGSCAF
            GeneTree:ENSGT00700000104332 Ensembl:ENSCAFT00000026682
            EMBL:AAEX03006516 Uniprot:F6UVZ9
        Length = 232

 Score = 141 (54.7 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   147 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 189


>UNIPROTKB|I3LKE3 [details] [associations]
            symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            KO:K09307 EMBL:CU570959 RefSeq:XP_003134888.1
            Ensembl:ENSSSCT00000030592 GeneID:100519456 KEGG:ssc:100519456
            Uniprot:I3LKE3
        Length = 234

 Score = 141 (54.7 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   131 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 173


>UNIPROTKB|E1B8D8 [details] [associations]
            symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045656 "negative regulation of monocyte
            differentiation" evidence=IEA] [GO:0045617 "negative regulation of
            keratinocyte differentiation" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0002686 "negative regulation of
            leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
            of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
            GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
            GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
            RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
            GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
        Length = 238

 Score = 141 (54.7 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   131 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 173


>UNIPROTKB|E2R5U1 [details] [associations]
            symbol:HOXA7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            CTD:3204 KO:K09307 OMA:EHKDEGP EMBL:AAEX03009390 RefSeq:XP_864678.2
            Ensembl:ENSCAFT00000004737 GeneID:482371 KEGG:cfa:482371
            Uniprot:E2R5U1
        Length = 239

 Score = 141 (54.7 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   131 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 173


>UNIPROTKB|F1SHT4 [details] [associations]
            symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045656 "negative regulation of monocyte
            differentiation" evidence=IEA] [GO:0045617 "negative regulation of
            keratinocyte differentiation" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0002686 "negative regulation of
            leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
            of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
            GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656 EMBL:CU570959
            Ensembl:ENSSSCT00000018182 Uniprot:F1SHT4
        Length = 241

 Score = 141 (54.7 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   131 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 173


>UNIPROTKB|F1NVN6 [details] [associations]
            symbol:MNR2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 EMBL:AADN02016763 IPI:IPI00586200
            Ensembl:ENSGALT00000018518 OMA:MAVEPEK Uniprot:F1NVN6
        Length = 158

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:     9 GKCRRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQ 54


>UNIPROTKB|F1MU40 [details] [associations]
            symbol:MNX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 EMBL:DAAA02012151 IPI:IPI00695827
            Ensembl:ENSBTAT00000006046 OMA:NGASAHT Uniprot:F1MU40
        Length = 192

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 29/46 (63%), Positives = 33/46 (71%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T  QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:    27 GKSRRPRTAFTKKQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 72


>ZFIN|ZDB-GENE-990415-113 [details] [associations]
            symbol:hoxc6a "homeo box C6a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-113
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
            HOVERGEN:HBG016849 KO:K09306 EMBL:AF071265 EMBL:BC083307
            EMBL:DQ060554 EMBL:X17266 EMBL:Y14546 IPI:IPI00494357 PIR:S08639
            RefSeq:NP_571198.1 UniGene:Dr.132203 ProteinModelPortal:P15862
            SMR:P15862 Ensembl:ENSDART00000103136 GeneID:30346 KEGG:dre:30346
            CTD:30346 eggNOG:NOG266030 InParanoid:P15862 OMA:MNSYFAN
            OrthoDB:EOG41NTMZ NextBio:20806776 ArrayExpress:P15862 Bgee:P15862
            Uniprot:P15862
        Length = 231

 Score = 139 (54.0 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  Y+  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   143 RRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 185


>UNIPROTKB|H9KZ47 [details] [associations]
            symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
            Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
        Length = 147

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:    68 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 110


>UNIPROTKB|H9L183 [details] [associations]
            symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0030099 "myeloid cell differentiation" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0090190 "positive regulation of branching involved in ureteric
            bud morphogenesis" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 OMA:WMRSSGT
            EMBL:AADN02027109 EMBL:AADN02027110 Ensembl:ENSGALT00000029852
            Uniprot:H9L183
        Length = 217

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 180


>UNIPROTKB|F1N1K1 [details] [associations]
            symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0090190 "positive
            regulation of branching involved in ureteric bud morphogenesis"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0030099 "myeloid cell differentiation"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 IPI:IPI00699636
            UniGene:Bt.91790 OMA:WMRSSGT EMBL:DAAA02049062
            Ensembl:ENSBTAT00000007292 Uniprot:F1N1K1
        Length = 217

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 180


>UNIPROTKB|Q9TT89 [details] [associations]
            symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 eggNOG:NOG238660 HOVERGEN:HBG016849 KO:K09307
            OrthoDB:EOG4W9J4Z EMBL:AF200721 IPI:IPI00699636 RefSeq:NP_776767.1
            UniGene:Bt.91790 ProteinModelPortal:Q9TT89 SMR:Q9TT89 PRIDE:Q9TT89
            GeneID:281820 KEGG:bta:281820 CTD:3217 InParanoid:Q9TT89
            NextBio:20805731 Uniprot:Q9TT89
        Length = 217

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 180


>UNIPROTKB|F6UVS6 [details] [associations]
            symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            KO:K09307 CTD:3217 OMA:WMRSSGT Ensembl:ENSCAFT00000026688
            EMBL:AAEX03006516 RefSeq:XP_851221.1 GeneID:608962 KEGG:cfa:608962
            Uniprot:F6UVS6
        Length = 217

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 180


>UNIPROTKB|C9K088 [details] [associations]
            symbol:MNX1 "Motor neuron and pancreas homeobox protein 1"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 EMBL:AC006357 HGNC:HGNC:4979 IPI:IPI00925104
            ProteinModelPortal:C9K088 SMR:C9K088 STRING:C9K088
            Ensembl:ENST00000428439 OMA:LERQFRM ArrayExpress:C9K088 Bgee:C9K088
            Uniprot:C9K088
        Length = 82

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:    27 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 72


>UNIPROTKB|F5H401 [details] [associations]
            symbol:MNX1 "Motor neuron and pancreas homeobox protein 1"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:AC006357 UniGene:Hs.37035 DNASU:3110 GeneID:3110 KEGG:hsa:3110
            CTD:3110 HGNC:HGNC:4979 KO:K08025 GenomeRNAi:3110 NextBio:12341
            IPI:IPI00925104 RefSeq:NP_001158727.1 ProteinModelPortal:F5H401
            SMR:F5H401 Ensembl:ENST00000543409 UCSC:uc003wnc.1
            ArrayExpress:F5H401 Bgee:F5H401 Uniprot:F5H401
        Length = 189

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:    27 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 72


>UNIPROTKB|P09629 [details] [associations]
            symbol:HOXB7 "Homeobox protein Hox-B7" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0030099 "myeloid cell differentiation"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0090190 "positive regulation of branching
            involved in ureteric bud morphogenesis" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0090190 GO:GO:0048704
            eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849 KO:K09307
            OrthoDB:EOG4W9J4Z EMBL:AC103702 CTD:3217 EMBL:M16937 EMBL:AK290653
            EMBL:AK223249 EMBL:BC015345 EMBL:S49765 EMBL:M30598 IPI:IPI00297418
            PIR:A28030 RefSeq:NP_004493.3 UniGene:Hs.436181
            ProteinModelPortal:P09629 SMR:P09629 IntAct:P09629 STRING:P09629
            PhosphoSite:P09629 DMDM:311033482 PRIDE:P09629 DNASU:3217
            Ensembl:ENST00000239165 GeneID:3217 KEGG:hsa:3217 UCSC:uc002inv.3
            GeneCards:GC17M046684 HGNC:HGNC:5118 HPA:HPA049940 MIM:142962
            neXtProt:NX_P09629 InParanoid:P09629 OMA:WMRSSGT PhylomeDB:P09629
            GenomeRNAi:3217 NextBio:12800 ArrayExpress:P09629 Bgee:P09629
            CleanEx:HS_HOXB7 Genevestigator:P09629 GermOnline:ENSG00000120087
            Uniprot:P09629
        Length = 217

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQ 180


>UNIPROTKB|F1RWG2 [details] [associations]
            symbol:HOXB7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0030099 "myeloid
            cell differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0090190 "positive regulation of branching
            involved in ureteric bud morphogenesis" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 KO:K09307 OMA:WMRSSGT
            EMBL:CU856160 RefSeq:XP_003131597.1 UniGene:Ssc.22336
            Ensembl:ENSSSCT00000019092 GeneID:100522513 KEGG:ssc:100522513
            Uniprot:F1RWG2
        Length = 217

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 180


>MGI|MGI:96188 [details] [associations]
            symbol:Hoxb7 "homeobox B7" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0030099 "myeloid cell differentiation"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI;IMP] [GO:0090190 "positive regulation of branching
            involved in ureteric bud morphogenesis" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:96188 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090 GO:GO:0090190
            GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849
            KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT EMBL:Y00436
            EMBL:X06762 EMBL:AK136706 EMBL:AL645478 EMBL:M18167 EMBL:M18400
            EMBL:X14570 IPI:IPI00132379 PIR:A26846 RefSeq:NP_034590.2
            UniGene:Mm.390366 ProteinModelPortal:P09024 SMR:P09024
            IntAct:P09024 MINT:MINT-1172508 STRING:P09024 PhosphoSite:P09024
            PRIDE:P09024 DNASU:15415 Ensembl:ENSMUST00000049352 GeneID:15415
            KEGG:mmu:15415 UCSC:uc007lbr.1 InParanoid:A2A9Z9 NextBio:288146
            Bgee:P09024 CleanEx:MM_HOXB7 Genevestigator:P09024
            GermOnline:ENSMUSG00000038721 Uniprot:P09024
        Length = 217

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQ 180


>RGD|1559918 [details] [associations]
            symbol:Hoxb7 "homeo box B7" species:10116 "Rattus norvegicus"
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA;ISO] [GO:0030099 "myeloid cell
            differentiation" evidence=IEA;ISO] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
            of branching involved in ureteric bud morphogenesis"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            RGD:1559918 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
            GO:GO:0090190 GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099
            HOVERGEN:HBG016849 KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT
            EMBL:BC079340 EMBL:M37566 IPI:IPI00195529 PIR:T10775
            RefSeq:NP_001017480.1 UniGene:Rn.113631 ProteinModelPortal:P18864
            SMR:P18864 PhosphoSite:P18864 Ensembl:ENSRNOT00000031035
            GeneID:497985 KEGG:rno:497985 UCSC:RGD:1559918 InParanoid:P18864
            NextBio:698299 Genevestigator:P18864 GermOnline:ENSRNOG00000007611
            Uniprot:P18864
        Length = 219

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 180


>ZFIN|ZDB-GENE-980526-290 [details] [associations]
            symbol:hoxb1b "homeo box B1b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0030902
            "hindbrain development" evidence=IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-290
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0030902 GeneTree:ENSGT00700000104161 HOGENOM:HOG000247020
            HOVERGEN:HBG006089 EMBL:U40995 EMBL:AJ306433 EMBL:AL645798
            EMBL:DQ060546 IPI:IPI00510340 RefSeq:NP_571217.2 UniGene:Dr.117296
            ProteinModelPortal:Q90423 SMR:Q90423 STRING:Q90423
            Ensembl:ENSDART00000076163 GeneID:30374 KEGG:dre:30374 CTD:30374
            eggNOG:NOG314488 InParanoid:Q90423 OrthoDB:EOG44F69X
            NextBio:20806792 ArrayExpress:Q90423 Bgee:Q90423 Uniprot:Q90423
        Length = 307

 Score = 143 (55.4 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)

Query:    81 LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +RT +T  QL ELEKEFHFNKYL R RR+E+AA+L+L E Q
Sbjct:   211 IRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQ 251


>UNIPROTKB|F1MEU5 [details] [associations]
            symbol:HOXC6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
            CTD:3223 EMBL:DAAA02012839 IPI:IPI00704983 RefSeq:XP_002687279.1
            RefSeq:XP_869789.3 UniGene:Bt.105698 ProteinModelPortal:F1MEU5
            Ensembl:ENSBTAT00000012174 GeneID:317660 KEGG:bta:317660
            NextBio:20807136 Uniprot:F1MEU5
        Length = 235

 Score = 139 (54.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  Y+  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   142 RRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 184


>UNIPROTKB|E2QSK8 [details] [associations]
            symbol:HOXC6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
            "embryonic skeletal system development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
            CTD:3223 EMBL:AAEX03014973 RefSeq:XP_003433616.1
            Ensembl:ENSCAFT00000010669 GeneID:486499 KEGG:cfa:486499
            NextBio:20860262 Uniprot:E2QSK8
        Length = 235

 Score = 139 (54.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  Y+  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   142 RRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 184


>UNIPROTKB|P09630 [details] [associations]
            symbol:HOXC6 "Homeobox protein Hox-C6" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003714 "transcription corepressor activity" evidence=TAS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0007275 "multicellular organismal
            development" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003714 GO:GO:0009952 GO:GO:0043565
            EMBL:CH471054 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306
            UniGene:Hs.549040 eggNOG:NOG266030 OMA:MNSYFAN OrthoDB:EOG41NTMZ
            EMBL:S82986 EMBL:M16938 EMBL:AK314829 EMBL:BC074844 EMBL:BC074845
            IPI:IPI00015921 IPI:IPI00221294 PIR:B28030 RefSeq:NP_004494.1
            RefSeq:NP_710160.1 ProteinModelPortal:P09630 SMR:P09630
            STRING:P09630 PhosphoSite:P09630 DMDM:115502398 PRIDE:P09630
            Ensembl:ENST00000243108 Ensembl:ENST00000394331 GeneID:3223
            KEGG:hsa:3223 UCSC:uc001ses.3 CTD:3223 GeneCards:GC12P054384
            HGNC:HGNC:5128 MIM:142972 neXtProt:NX_P09630 PharmGKB:PA29403
            InParanoid:P09630 PhylomeDB:P09630 GenomeRNAi:3223 NextBio:12825
            ArrayExpress:P09630 Bgee:P09630 CleanEx:HS_HOXC6
            Genevestigator:P09630 GermOnline:ENSG00000197757 Uniprot:P09630
        Length = 235

 Score = 139 (54.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  Y+  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   142 RRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 184


>UNIPROTKB|I3L9Q6 [details] [associations]
            symbol:HOXC6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
            EMBL:FP579005 RefSeq:XP_003355472.1 ProteinModelPortal:I3L9Q6
            Ensembl:ENSSSCT00000032524 GeneID:100627932 KEGG:ssc:100627932
            Uniprot:I3L9Q6
        Length = 235

 Score = 139 (54.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  Y+  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   142 RRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 184


>MGI|MGI:96197 [details] [associations]
            symbol:Hoxc6 "homeobox C6" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96197
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
            GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG266030
            OMA:MNSYFAN OrthoDB:EOG41NTMZ CTD:3223 EMBL:J03074 EMBL:M35986
            EMBL:X16511 EMBL:X16510 EMBL:S74185 EMBL:X12504 EMBL:X16838
            IPI:IPI00310548 IPI:IPI00387269 PIR:A32167 PIR:A56568 PIR:S00987
            RefSeq:NP_034595.2 UniGene:Mm.4444 ProteinModelPortal:P10629
            SMR:P10629 STRING:P10629 PhosphoSite:P10629 PRIDE:P10629
            Ensembl:ENSMUST00000001711 GeneID:15425 KEGG:mmu:15425
            InParanoid:P10629 ChiTaRS:HOXC6 NextBio:288174 Bgee:P10629
            CleanEx:MM_HOXC6 Genevestigator:P10629
            GermOnline:ENSMUSG00000001661 Uniprot:P10629
        Length = 235

 Score = 139 (54.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  Y+  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   142 RRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 184


>UNIPROTKB|G3V841 [details] [associations]
            symbol:Hoxc6 "Homeo box C6" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:CH474035 KO:K09306 OMA:MNSYFAN
            CTD:3223 EMBL:AC116663 RefSeq:XP_001069410.2 RefSeq:XP_003750463.1
            ProteinModelPortal:G3V841 SMR:G3V841 PRIDE:G3V841
            Ensembl:ENSRNOT00000022217 GeneID:252885 KEGG:rno:252885
            Uniprot:G3V841
        Length = 235

 Score = 139 (54.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  Y+  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   142 RRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQ 184


>UNIPROTKB|E2QT33 [details] [associations]
            symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 Ensembl:ENSCAFT00000026688 Uniprot:E2QT33
        Length = 237

 Score = 138 (53.6 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFH+N+YL R RRIEIA +L LTERQ
Sbjct:   138 KRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 180


>ZFIN|ZDB-GENE-000329-2 [details] [associations]
            symbol:hoxb7a "homeo box B7a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-000329-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
            GeneTree:ENSGT00700000104090 eggNOG:NOG238660 HOVERGEN:HBG016849
            KO:K09307 OrthoDB:EOG4W9J4Z EMBL:AL645782 EMBL:DQ060542 EMBL:Y14533
            IPI:IPI00506071 RefSeq:NP_001108563.1 UniGene:Dr.75790
            ProteinModelPortal:Q8AWY9 SMR:Q8AWY9 STRING:Q8AWY9 PRIDE:Q8AWY9
            Ensembl:ENSDART00000078453 GeneID:58044 KEGG:dre:58044 CTD:58044
            InParanoid:Q8AWY9 OMA:NNENNLR NextBio:20892308 ArrayExpress:Q8AWY9
            Bgee:Q8AWY9 Uniprot:Q8AWY9
        Length = 227

 Score = 137 (53.3 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  Y+  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   146 KRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQ 188


>ZFIN|ZDB-GENE-041001-114 [details] [associations]
            symbol:gsx2 "GS homeobox 2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-041001-114
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09310
            GeneTree:ENSGT00700000104161 CTD:170825 OMA:AFCVCPL EMBL:BX276097
            EMBL:BC115063 IPI:IPI00497940 RefSeq:NP_001020683.1
            UniGene:Dr.93529 SMR:Q1RMA3 Ensembl:ENSDART00000063601
            GeneID:561076 KEGG:dre:561076 NextBio:20883747 Uniprot:Q1RMA3
        Length = 242

 Score = 138 (53.6 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   141 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQ 183


>FB|FBgn0000014 [details] [associations]
            symbol:abd-A "abdominal A" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IMP] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS;IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0008406 "gonad
            development" evidence=NAS;TAS] [GO:0007422 "peripheral nervous
            system development" evidence=TAS] [GO:0035224 "genital disc
            anterior/posterior pattern formation" evidence=IEP] [GO:0007506
            "gonadal mesoderm development" evidence=IMP] [GO:0008354 "germ cell
            migration" evidence=IMP;TAS] [GO:0007280 "pole cell migration"
            evidence=TAS] [GO:0007494 "midgut development" evidence=TAS]
            [GO:0007385 "specification of segmental identity, abdomen"
            evidence=NAS] [GO:0007438 "oenocyte development" evidence=IMP]
            [GO:0035053 "dorsal vessel heart proper cell fate commitment"
            evidence=IEP;IMP;TAS] [GO:0007507 "heart development" evidence=IMP]
            [GO:0007501 "mesodermal cell fate specification" evidence=IMP]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0006915
            "apoptotic process" evidence=IMP] [GO:0009987 "cellular process"
            evidence=IMP] [GO:0007400 "neuroblast fate determination"
            evidence=IMP] [GO:0035225 "determination of genital disc
            primordium" evidence=IMP] [GO:0048806 "genitalia development"
            evidence=IMP] [GO:0010002 "cardioblast differentiation"
            evidence=IMP] [GO:0048738 "cardiac muscle tissue development"
            evidence=IMP] [GO:0005667 "transcription factor complex"
            evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0014019 "neuroblast development" evidence=IMP]
            [GO:0048636 "positive regulation of muscle organ development"
            evidence=IMP] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0042694 "muscle
            cell fate specification" evidence=IMP] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
            GO:GO:0006915 GO:GO:0007280 GO:GO:0042694 GO:GO:0048636
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 eggNOG:NOG328968
            Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
            Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X54453 EMBL:U31961
            EMBL:BT016031 PIR:A35915 RefSeq:NP_001163632.1
            RefSeq:NP_001247145.1 RefSeq:NP_476693.1 RefSeq:NP_732176.1
            UniGene:Dm.3286 ProteinModelPortal:P29555 SMR:P29555 DIP:DIP-17987N
            MINT:MINT-344957 STRING:P29555 EnsemblMetazoa:FBtr0083388
            GeneID:42037 KEGG:dme:Dmel_CG10325 CTD:42037 FlyBase:FBgn0000014
            GeneTree:ENSGT00700000104090 InParanoid:P29555 KO:K09311
            OMA:QPFISSH OrthoDB:EOG4VHHQ4 PhylomeDB:P29555 GenomeRNAi:42037
            NextBio:826865 Bgee:P29555 GermOnline:CG10325 GO:GO:0005667
            GO:GO:0003705 GO:GO:0048738 GO:GO:0010002 GO:GO:0035225
            GO:GO:0035053 GO:GO:0035224 GO:GO:0048806 GO:GO:0007506
            GO:GO:0007501 GO:GO:0007494 GO:GO:0014019 GO:GO:0007400
            GO:GO:0007438 Uniprot:P29555
        Length = 590

 Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 33/47 (70%), Positives = 34/47 (72%)

Query:    76 GLPRRL-RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G PRR  R  YT  Q LELEKEFHFN YL R RRIEIA +L LTERQ
Sbjct:   395 GCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 441


>UNIPROTKB|Q8T940 [details] [associations]
            symbol:Ubx "Homeotic protein ultrabithorax" species:39708
            "Junonia coenia" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:AY074760 ProteinModelPortal:Q8T940 SMR:Q8T940 Uniprot:Q8T940
        Length = 253

 Score = 138 (53.6 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 31/46 (67%), Positives = 33/46 (71%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             GL RR R  YT  Q LELEKEFH N YL R RRIE+A +L LTERQ
Sbjct:   157 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQ 202


>UNIPROTKB|Q08820 [details] [associations]
            symbol:hoxd1 "Homeobox protein Hox-D1" species:8355
            "Xenopus laevis" [GO:0030902 "hindbrain development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0030902 KO:K09301 HOVERGEN:HBG006089 CTD:3231 EMBL:M63873
            EMBL:L25857 EMBL:BC106402 EMBL:X62052 PIR:A40357
            RefSeq:NP_001084035.1 UniGene:Xl.53491 ProteinModelPortal:Q08820
            SMR:Q08820 GeneID:399267 KEGG:xla:399267 Xenbase:XB-GENE-482735
            Uniprot:Q08820
        Length = 300

 Score = 140 (54.3 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 29/44 (65%), Positives = 32/44 (72%)

Query:    78 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             P  +RT +T  QL ELEKEFHFNKYL R RRIEIA SL L + Q
Sbjct:   200 PCNVRTNFTTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQ 243


>ZFIN|ZDB-GENE-041008-135 [details] [associations]
            symbol:gsx1 "GS homeobox 1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-041008-135 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            CTD:219409 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
            OMA:HNCKCSS OrthoDB:EOG4GTKDV GeneTree:ENSGT00700000104161
            EMBL:BX247876 EMBL:AY486348 IPI:IPI00492455 RefSeq:NP_001012251.1
            UniGene:Dr.91023 SMR:Q5QHS3 Ensembl:ENSDART00000051833
            GeneID:449875 KEGG:dre:449875 InParanoid:Q5QHS3 NextBio:20832927
            Uniprot:Q5QHS3
        Length = 243

 Score = 137 (53.3 bits), Expect = 3.8e-09, P = 3.8e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   137 KRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQ 179


>ZFIN|ZDB-GENE-990415-101 [details] [associations]
            symbol:hoxb1a "homeo box B1a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0021561 "facial nerve development" evidence=IMP] [GO:0021570
            "rhombomere 4 development" evidence=IMP;IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-101 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 HOGENOM:HOG000247020
            HOVERGEN:HBG006089 GO:GO:0021570 GO:GO:0021561 EMBL:CR751227
            EMBL:BC162942 IPI:IPI00509709 UniGene:Dr.83326 STRING:B3DHZ4
            Ensembl:ENSDART00000110682 Uniprot:B3DHZ4
        Length = 316

 Score = 140 (54.3 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 28/46 (60%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G    +RT +T  QL ELEKEFHF+KYL R RR+EIAA+L+L E Q
Sbjct:   220 GPQNTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 265


>RGD|1587253 [details] [associations]
            symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
            evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
            adhesion" evidence=ISO] [GO:0002686 "negative regulation of
            leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0005634
            "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
            specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
            keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
            regulation of monocyte differentiation" evidence=ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
            differentiation" evidence=ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
            GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
            UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
            UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
            Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
        Length = 105

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 28/43 (65%), Positives = 32/43 (74%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R R +EIA +L LTERQ
Sbjct:     6 KRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQ 48


>UNIPROTKB|P09634 [details] [associations]
            symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
            GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
            UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
            UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
            Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
        Length = 105

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 28/43 (65%), Positives = 32/43 (74%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R R +EIA +L LTERQ
Sbjct:     6 KRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQ 48


>WB|WBGene00003102 [details] [associations]
            symbol:mab-5 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0042659 "regulation of cell fate specification" evidence=IMP]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
            [GO:0050679 "positive regulation of epithelial cell proliferation"
            evidence=IMP] [GO:0045138 "tail tip morphogenesis"
            evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
            GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
            GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
            GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
            RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
            SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
            EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
            UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
            OMA:TSANFGE NextBio:891072 Uniprot:P10038
        Length = 200

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  +R R  Y+ +Q LELEKEFH++KYL R RR EI+ +L LTERQ
Sbjct:   115 GESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQ 160


>FB|FBgn0260642 [details] [associations]
            symbol:Antp "Antennapedia" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007384
            "specification of segmental identity, thorax" evidence=IMP]
            [GO:0009948 "anterior/posterior axis specification" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0007494 "midgut development" evidence=TAS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=NAS] [GO:0007379 "segment specification"
            evidence=NAS] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0007507 "heart development"
            evidence=IEP] [GO:0007383 "specification of segmental identity,
            antennal segment" evidence=IMP] [GO:0048542 "lymph gland
            development" evidence=IMP] [GO:0014019 "neuroblast development"
            evidence=IMP] [GO:0042694 "muscle cell fate specification"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
            GO:GO:0005737 GO:GO:0007507 GO:GO:0042694 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
            GO:GO:0003705 GO:GO:0007494 GO:GO:0014019 EMBL:AE001572 EMBL:X03790
            EMBL:X03791 EMBL:M20704 EMBL:M20705 EMBL:AY060407 EMBL:M14496
            EMBL:K01948 EMBL:M12009 PIR:A23450 RefSeq:NP_996167.1
            RefSeq:NP_996168.1 RefSeq:NP_996170.1 RefSeq:NP_996175.1
            RefSeq:NP_996176.1 UniGene:Dm.3803 PDB:1AHD PDB:1HOM PDB:1SAN
            PDB:2HOA PDB:9ANT PDBsum:1AHD PDBsum:1HOM PDBsum:1SAN PDBsum:2HOA
            PDBsum:9ANT ProteinModelPortal:P02833 SMR:P02833 DIP:DIP-51405N
            IntAct:P02833 MINT:MINT-763892 STRING:P02833 PRIDE:P02833
            EnsemblMetazoa:FBtr0081647 EnsemblMetazoa:FBtr0081652
            EnsemblMetazoa:FBtr0081654 EnsemblMetazoa:FBtr0081655 GeneID:40835
            KEGG:dme:Dmel_CG1028 CTD:40835 FlyBase:FBgn0260642 eggNOG:NOG238660
            HOGENOM:HOG000142851 InParanoid:P02833 OMA:FPPYDRM
            OrthoDB:EOG43XSKG PhylomeDB:P02833 EvolutionaryTrace:P02833
            GenomeRNAi:40835 NextBio:820851 Bgee:P02833 GermOnline:CG1028
            GO:GO:0009948 GO:GO:0048542 GO:GO:0007383 GO:GO:0007384
            Uniprot:P02833
        Length = 378

 Score = 141 (54.7 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   298 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 340


>ZFIN|ZDB-GENE-040415-1 [details] [associations]
            symbol:mnx2a "motor neuron and pancreas homeobox 2a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-040415-1 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG322049 HOVERGEN:HBG051910 HSSP:P14653
            EMBL:AY445045 IPI:IPI00497108 UniGene:Dr.91916
            ProteinModelPortal:Q6SYZ0 SMR:Q6SYZ0 InParanoid:Q6SYZ0
            NextBio:20817872 Uniprot:Q6SYZ0
        Length = 309

 Score = 139 (54.0 bits), Expect = 4.9e-09, P = 4.9e-09
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   148 GKCRRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQ 193


>MGI|MGI:95842 [details] [associations]
            symbol:Gsx1 "GS homeobox 1" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0021527 "spinal cord association neuron differentiation"
            evidence=IGI] [GO:0021854 "hypothalamus development" evidence=IMP]
            [GO:0021984 "adenohypophysis development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;IMP] [GO:0048663 "neuron fate commitment"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:95842 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527
            GO:GO:0021984 GO:GO:0048663 GO:GO:0021854 CTD:219409
            eggNOG:NOG264927 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
            OMA:HNCKCSS OrthoDB:EOG4GTKDV EMBL:U21224 IPI:IPI00133256
            PIR:S63604 RefSeq:NP_032204.1 UniGene:Mm.4797
            ProteinModelPortal:P31315 SMR:P31315 STRING:P31315 PRIDE:P31315
            Ensembl:ENSMUST00000065382 GeneID:14842 KEGG:mmu:14842
            GeneTree:ENSGT00700000104161 InParanoid:P31315 NextBio:287067
            Bgee:P31315 CleanEx:MM_GSX1 Genevestigator:P31315
            GermOnline:ENSMUSG00000053129 Uniprot:P31315
        Length = 261

 Score = 137 (53.3 bits), Expect = 5.0e-09, P = 5.0e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   147 KRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQ 189


>UNIPROTKB|G3V634 [details] [associations]
            symbol:Gsx1 "Protein Gsx1" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0021854 "hypothalamus
            development" evidence=IEA] [GO:0021984 "adenohypophysis
            development" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048663 "neuron fate commitment" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            RGD:1310020 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:CH474012 CTD:219409 KO:K09310 OMA:HNCKCSS
            GeneTree:ENSGT00700000104161 RefSeq:NP_001178592.1
            UniGene:Rn.228201 Ensembl:ENSRNOT00000001260 GeneID:288457
            KEGG:rno:288457 NextBio:628114 Uniprot:G3V634
        Length = 261

 Score = 137 (53.3 bits), Expect = 5.0e-09, P = 5.0e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   147 KRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQ 189


>UNIPROTKB|Q24645 [details] [associations]
            symbol:Antp "Homeotic protein antennapedia" species:7241
            "Drosophila subobscura" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007384 "specification of
            segmental identity, thorax" evidence=ISS] [GO:0009948
            "anterior/posterior axis specification" evidence=ISS]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0009948 GO:GO:0007384 EMBL:X60995 EMBL:X62246 PIR:S26492
            ProteinModelPortal:Q24645 SMR:Q24645 FlyBase:FBgn0012932
            Uniprot:Q24645
        Length = 394

 Score = 141 (54.7 bits), Expect = 5.1e-09, P = 5.1e-09
 Identities = 30/43 (69%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+YL R RRIEIA +L LTERQ
Sbjct:   314 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 356


>UNIPROTKB|E2RI77 [details] [associations]
            symbol:GSX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663
            "neuron fate commitment" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
            [GO:0021527 "spinal cord association neuron differentiation"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
            GO:GO:0048663 GO:GO:0021854 OMA:HNCKCSS
            GeneTree:ENSGT00700000104161 EMBL:AAEX03014242
            Ensembl:ENSCAFT00000010870 Uniprot:E2RI77
        Length = 263

 Score = 137 (53.3 bits), Expect = 5.2e-09, P = 5.2e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   148 KRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQ 190


>UNIPROTKB|Q9H4S2 [details] [associations]
            symbol:GSX1 "GS homeobox 1" species:9606 "Homo sapiens"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0021854 "hypothalamus
            development" evidence=IEA] [GO:0021984 "adenohypophysis
            development" evidence=IEA] [GO:0048663 "neuron fate commitment"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
            GO:GO:0048663 GO:GO:0021854 EMBL:AB044157 EMBL:AB044158
            EMBL:AL390738 IPI:IPI00028199 RefSeq:NP_663632.1 UniGene:Hs.351785
            ProteinModelPortal:Q9H4S2 SMR:Q9H4S2 STRING:Q9H4S2 DMDM:27923786
            PRIDE:Q9H4S2 DNASU:219409 Ensembl:ENST00000302945 GeneID:219409
            KEGG:hsa:219409 UCSC:uc001urr.1 CTD:219409 GeneCards:GC13P028366
            HGNC:HGNC:20374 HPA:HPA047096 neXtProt:NX_Q9H4S2
            PharmGKB:PA162390373 eggNOG:NOG264927 HOGENOM:HOG000010106
            HOVERGEN:HBG003555 InParanoid:Q9H4S2 KO:K09310 OMA:HNCKCSS
            OrthoDB:EOG4GTKDV GenomeRNAi:219409 NextBio:90587 Bgee:Q9H4S2
            CleanEx:HS_GSX1 Genevestigator:Q9H4S2 GermOnline:ENSG00000169840
            Uniprot:Q9H4S2
        Length = 264

 Score = 137 (53.3 bits), Expect = 5.2e-09, P = 5.2e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   148 KRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQ 190


>UNIPROTKB|F1RSW3 [details] [associations]
            symbol:GSX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663 "neuron
            fate commitment" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021854
            "hypothalamus development" evidence=IEA] [GO:0021527 "spinal cord
            association neuron differentiation" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984 GO:GO:0048663
            GO:GO:0021854 OMA:HNCKCSS GeneTree:ENSGT00700000104161
            EMBL:CU633812 Ensembl:ENSSSCT00000010201 Uniprot:F1RSW3
        Length = 265

 Score = 137 (53.3 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   146 KRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQ 188


>UNIPROTKB|G3MYX4 [details] [associations]
            symbol:G3MYX4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0045446
            "endothelial cell differentiation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
            GeneTree:ENSGT00700000104189 OMA:APQIFPW EMBL:DAAA02049063
            Ensembl:ENSBTAT00000065146 Uniprot:G3MYX4
        Length = 251

 Score = 136 (52.9 bits), Expect = 5.7e-09, P = 5.7e-09
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R RTAYT  Q LELEKE HFN+YL R  RIEIA +L L+ERQ
Sbjct:   195 KRARTAYTRYQTLELEKELHFNRYLTRRWRIEIAHALCLSERQ 237


>ZFIN|ZDB-GENE-040415-2 [details] [associations]
            symbol:mnx2b "motor neuron and pancreas homeobox 2b"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-040415-2 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 EMBL:CR762428
            IPI:IPI00972793 Ensembl:ENSDART00000114035 Uniprot:F1RCJ6
        Length = 328

 Score = 139 (54.0 bits), Expect = 5.7e-09, P = 5.7e-09
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   160 GKCRRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQ 205


>UNIPROTKB|Q9BZM3 [details] [associations]
            symbol:GSX2 "GS homeobox 2" species:9606 "Homo sapiens"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
            exchange by neurological system process" evidence=IEA] [GO:0021527
            "spinal cord association neuron differentiation" evidence=IEA]
            [GO:0021575 "hindbrain morphogenesis" evidence=IEA] [GO:0021798
            "forebrain dorsal/ventral pattern formation" evidence=IEA]
            [GO:0021889 "olfactory bulb interneuron differentiation"
            evidence=IEA] [GO:0048665 "neuron fate specification" evidence=IEA]
            [GO:0048853 "forebrain morphogenesis" evidence=IEA] [GO:0060163
            "subpallium neuron fate commitment" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0002087
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665 GO:GO:0021527
            GO:GO:0060163 GO:GO:0021575 GO:GO:0021889 GO:GO:0021798
            GO:GO:0048853 eggNOG:NOG264927 HOGENOM:HOG000010106
            HOVERGEN:HBG003555 KO:K09310 EMBL:AB028838 EMBL:AF306344
            EMBL:AF306343 EMBL:AF439445 EMBL:AC110298 EMBL:BC075089
            EMBL:BC075090 IPI:IPI00001737 RefSeq:NP_573574.1 UniGene:Hs.371899
            ProteinModelPortal:Q9BZM3 SMR:Q9BZM3 IntAct:Q9BZM3
            MINT:MINT-7241457 STRING:Q9BZM3 DMDM:296434530 PRIDE:Q9BZM3
            DNASU:170825 Ensembl:ENST00000326902 GeneID:170825 KEGG:hsa:170825
            UCSC:uc010igp.1 CTD:170825 GeneCards:GC04P054966 HGNC:HGNC:24959
            neXtProt:NX_Q9BZM3 PharmGKB:PA162390374 InParanoid:Q9BZM3
            OMA:AFCVCPL OrthoDB:EOG48WC3H GenomeRNAi:170825 NextBio:89122
            ArrayExpress:Q9BZM3 Bgee:Q9BZM3 CleanEx:HS_GSX2
            Genevestigator:Q9BZM3 GermOnline:ENSG00000180613 Uniprot:Q9BZM3
        Length = 304

 Score = 138 (53.6 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   203 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQ 245


>UNIPROTKB|F1SE61 [details] [associations]
            symbol:GSX2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060163 "subpallium
            neuron fate commitment" evidence=IEA] [GO:0048853 "forebrain
            morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0021889 "olfactory bulb
            interneuron differentiation" evidence=IEA] [GO:0021798 "forebrain
            dorsal/ventral pattern formation" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021527 "spinal cord
            association neuron differentiation" evidence=IEA] [GO:0002087
            "regulation of respiratory gaseous exchange by neurological system
            process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0002087 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665 GO:GO:0021527
            GO:GO:0060163 GO:GO:0021575 GO:GO:0021889 GO:GO:0021798
            GO:GO:0048853 KO:K09310 GeneTree:ENSGT00700000104161 OMA:AFCVCPL
            EMBL:FP015892 RefSeq:XP_003129034.1 Ensembl:ENSSSCT00000009677
            GeneID:100524448 KEGG:ssc:100524448 Uniprot:F1SE61
        Length = 304

 Score = 138 (53.6 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   203 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQ 245


>UNIPROTKB|G3N3S1 [details] [associations]
            symbol:GSX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060163 "subpallium
            neuron fate commitment" evidence=IEA] [GO:0048853 "forebrain
            morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0021889 "olfactory bulb
            interneuron differentiation" evidence=IEA] [GO:0021798 "forebrain
            dorsal/ventral pattern formation" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021527 "spinal cord
            association neuron differentiation" evidence=IEA] [GO:0002087
            "regulation of respiratory gaseous exchange by neurological system
            process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0002087 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665 GO:GO:0021527
            GO:GO:0060163 GO:GO:0021575 GO:GO:0021889 GO:GO:0021798
            GO:GO:0048853 KO:K09310 GeneTree:ENSGT00700000104161 CTD:170825
            OMA:AFCVCPL EMBL:DAAA02017695 RefSeq:NP_001179129.1
            UniGene:Bt.87515 Ensembl:ENSBTAT00000065114 GeneID:539228
            KEGG:bta:539228 NextBio:20877863 Uniprot:G3N3S1
        Length = 305

 Score = 138 (53.6 bits), Expect = 6.2e-09, P = 6.2e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   204 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQ 246


>MGI|MGI:95843 [details] [associations]
            symbol:Gsx2 "GS homeobox 2" species:10090 "Mus musculus"
            [GO:0002087 "regulation of respiratory gaseous exchange by
            neurological system process" evidence=IMP] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IGI;IMP] [GO:0007417 "central nervous system
            development" evidence=IMP] [GO:0007420 "brain development"
            evidence=IGI] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IGI] [GO:0021575 "hindbrain
            morphogenesis" evidence=IMP] [GO:0021798 "forebrain dorsal/ventral
            pattern formation" evidence=IMP] [GO:0021889 "olfactory bulb
            interneuron differentiation" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0048663 "neuron
            fate commitment" evidence=IGI] [GO:0048665 "neuron fate
            specification" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
            evidence=IMP] [GO:0060163 "subpallium neuron fate commitment"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:95843 GO:GO:0005634 GO:GO:0003677
            GO:GO:0043565 GO:GO:0002087 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048665 GO:GO:0021527 GO:GO:0060163 GO:GO:0021575
            GO:GO:0021889 GO:GO:0021798 GO:GO:0048853 eggNOG:NOG264927
            HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
            GeneTree:ENSGT00700000104161 CTD:170825 OMA:AFCVCPL EMBL:S79041
            IPI:IPI00133258 PIR:B37290 RefSeq:NP_573555.1 UniGene:Mm.218752
            ProteinModelPortal:P31316 SMR:P31316 STRING:P31316 PRIDE:P31316
            DNASU:14843 Ensembl:ENSMUST00000040477 GeneID:14843 KEGG:mmu:14843
            UCSC:uc008xtx.1 InParanoid:P31316 NextBio:287071 Bgee:P31316
            CleanEx:MM_GSX2 Genevestigator:P31316 GermOnline:ENSMUSG00000035946
            Uniprot:P31316
        Length = 305

 Score = 138 (53.6 bits), Expect = 6.2e-09, P = 6.2e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   204 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQ 246


>RGD|1308047 [details] [associations]
            symbol:Gsx2 "GS homeobox 2" species:10116 "Rattus norvegicus"
            [GO:0002087 "regulation of respiratory gaseous exchange by
            neurological system process" evidence=IEA;ISO] [GO:0003677 "DNA
            binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007389 "pattern specification process"
            evidence=ISO] [GO:0007417 "central nervous system development"
            evidence=ISO] [GO:0007420 "brain development" evidence=ISO]
            [GO:0021527 "spinal cord association neuron differentiation"
            evidence=IEA;ISO] [GO:0021575 "hindbrain morphogenesis"
            evidence=IEA;ISO] [GO:0021798 "forebrain dorsal/ventral pattern
            formation" evidence=IEA;ISO] [GO:0021889 "olfactory bulb
            interneuron differentiation" evidence=IEA;ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0048663 "neuron
            fate commitment" evidence=ISO] [GO:0048665 "neuron fate
            specification" evidence=IEA;ISO] [GO:0048853 "forebrain
            morphogenesis" evidence=IEA;ISO] [GO:0060163 "subpallium neuron
            fate commitment" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:1308047 GO:GO:0005634
            GO:GO:0043565 GO:GO:0002087 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665
            GO:GO:0021527 GO:GO:0060163 GO:GO:0021575 GO:GO:0021889
            GO:GO:0021798 GO:GO:0048853 HOGENOM:HOG000010106 HOVERGEN:HBG003555
            GeneTree:ENSGT00700000104161 OMA:AFCVCPL EMBL:EU202675
            IPI:IPI00193448 UniGene:Rn.102073 Ensembl:ENSRNOT00000003080
            UCSC:RGD:1308047 Genevestigator:B6RGM2 Uniprot:B6RGM2
        Length = 305

 Score = 138 (53.6 bits), Expect = 6.2e-09, P = 6.2e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   204 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQ 246


>ZFIN|ZDB-GENE-040409-1 [details] [associations]
            symbol:mnx1 "motor neuron and pancreas homeobox 1"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-040409-1 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 CTD:3110
            HOGENOM:HOG000234345 HOVERGEN:HBG051910 KO:K08025 HSSP:P14653
            OMA:YNSSDCS EMBL:BX247878 EMBL:BC093243 EMBL:AY445044
            IPI:IPI00504002 RefSeq:NP_001009885.1 UniGene:Dr.91917 SMR:Q6SYZ1
            STRING:Q6SYZ1 Ensembl:ENSDART00000052236 GeneID:405399
            KEGG:dre:405399 InParanoid:Q6SYZ1 NextBio:20817724 Uniprot:Q6SYZ1
        Length = 311

 Score = 138 (53.6 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   175 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 220


>UNIPROTKB|E2RAL5 [details] [associations]
            symbol:GSX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060163
            "subpallium neuron fate commitment" evidence=IEA] [GO:0048853
            "forebrain morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0021889 "olfactory bulb
            interneuron differentiation" evidence=IEA] [GO:0021798 "forebrain
            dorsal/ventral pattern formation" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021527 "spinal cord
            association neuron differentiation" evidence=IEA] [GO:0002087
            "regulation of respiratory gaseous exchange by neurological system
            process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0002087 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048665 GO:GO:0021527
            GO:GO:0060163 GO:GO:0021575 GO:GO:0021889 GO:GO:0021798
            GO:GO:0048853 GeneTree:ENSGT00700000104161 OMA:AFCVCPL
            EMBL:AAEX03009071 EMBL:AAEX03009072 Ensembl:ENSCAFT00000003252
            Uniprot:E2RAL5
        Length = 313

 Score = 138 (53.6 bits), Expect = 6.6e-09, P = 6.6e-09
 Identities = 28/43 (65%), Positives = 36/43 (83%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L+L+E+Q
Sbjct:   212 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQ 254


>UNIPROTKB|E2RDA2 [details] [associations]
            symbol:MNX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060539
            "diaphragm development" evidence=IEA] [GO:0031018 "endocrine
            pancreas development" evidence=IEA] [GO:0021904 "dorsal/ventral
            neural tube patterning" evidence=IEA] [GO:0021675 "nerve
            development" evidence=IEA] [GO:0021520 "spinal cord motor neuron
            cell fate specification" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0008045 GO:GO:0009791 GO:GO:0021675
            GO:GO:0031018 GO:GO:0060539 GO:GO:0021904
            GeneTree:ENSGT00660000095141 GO:GO:0021520 EMBL:AAEX03010324
            EMBL:AAEX03010325 Ensembl:ENSCAFT00000008288 OMA:YNSSDCS
            Uniprot:E2RDA2
        Length = 323

 Score = 138 (53.6 bits), Expect = 7.1e-09, P = 7.1e-09
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   158 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 203


>UNIPROTKB|F1RZF8 [details] [associations]
            symbol:HOXD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09301 OMA:GDGAFVS
            EMBL:CU570829 RefSeq:XP_001925052.2 UniGene:Ssc.95040
            Ensembl:ENSSSCT00000017407 GeneID:100157662 KEGG:ssc:100157662
            Uniprot:F1RZF8
        Length = 327

 Score = 138 (53.6 bits), Expect = 7.3e-09, P = 7.3e-09
 Identities = 28/44 (63%), Positives = 32/44 (72%)

Query:    78 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             P  +RT ++  QL ELEKEFHFNKYL R RRIEIA SL L + Q
Sbjct:   228 PSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQ 271


>UNIPROTKB|F1P1C8 [details] [associations]
            symbol:MNX1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001764 "neuron migration" evidence=IEA] [GO:0008045 "motor
            neuron axon guidance" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0021520 "spinal cord motor neuron
            cell fate specification" evidence=IEA] [GO:0021675 "nerve
            development" evidence=IEA] [GO:0021904 "dorsal/ventral neural tube
            patterning" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0060539 "diaphragm development"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 OMA:YNSSDCS EMBL:AADN02000357
            IPI:IPI00577112 Ensembl:ENSGALT00000010389 Uniprot:F1P1C8
        Length = 348

 Score = 138 (53.6 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   188 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 233


>UNIPROTKB|P20822 [details] [associations]
            symbol:Ubx "Homeotic protein ultrabithorax" species:46245
            "Drosophila pseudoobscura pseudoobscura" [GO:0003677 "DNA binding"
            evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:CM000070 GenomeReviews:CM000070_GR eggNOG:NOG252841
            EMBL:X05179 EMBL:U03179 PIR:A29259 RefSeq:XP_001359066.2
            GeneID:4802074 KEGG:dpo:Dpse_GA10294 FlyBase:FBgn0243536
            InParanoid:P20822 Uniprot:P20822
        Length = 385

 Score = 138 (53.6 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 31/46 (67%), Positives = 33/46 (71%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             GL RR R  YT  Q LELEKEFH N YL R RRIE+A +L LTERQ
Sbjct:   288 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQ 333


>UNIPROTKB|Q6VPU7 [details] [associations]
            symbol:Ubx "Ultrabithorax" species:7244 "Drosophila
            virilis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 FlyBase:FBgn0013100 EMBL:AY333070 HSSP:P83949
            ProteinModelPortal:Q6VPU7 SMR:Q6VPU7 STRING:Q6VPU7
            InParanoid:Q6VPU7 Uniprot:Q6VPU7
        Length = 387

 Score = 138 (53.6 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 31/46 (67%), Positives = 33/46 (71%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             GL RR R  YT  Q LELEKEFH N YL R RRIE+A +L LTERQ
Sbjct:   290 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQ 335


>FB|FBgn0003944 [details] [associations]
            symbol:Ubx "Ultrabithorax" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS;IDA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0000980 "RNA polymerase
            II distal enhancer sequence-specific DNA binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS;NAS;TAS] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0019904 "protein domain specific binding" evidence=IPI]
            [GO:0010092 "specification of organ identity" evidence=IMP]
            [GO:0007482 "haltere development" evidence=IMP] [GO:0007494 "midgut
            development" evidence=TAS] [GO:0007385 "specification of segmental
            identity, abdomen" evidence=NAS] [GO:0007384 "specification of
            segmental identity, thorax" evidence=IMP;NAS] [GO:0001706 "endoderm
            formation" evidence=TAS] [GO:0007507 "heart development"
            evidence=IEP;IMP] [GO:0007501 "mesodermal cell fate specification"
            evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis"
            evidence=IMP] [GO:0035052 "dorsal vessel aortic cell fate
            commitment" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0007424 "open tracheal system development"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045570 "regulation of imaginal disc growth"
            evidence=IMP] [GO:0048636 "positive regulation of muscle organ
            development" evidence=IMP] [GO:0001709 "cell fate determination"
            evidence=IGI;IMP] [GO:0042694 "muscle cell fate specification"
            evidence=IMP] [GO:0061327 "anterior Malpighian tubule development"
            evidence=IMP] [GO:0060969 "negative regulation of gene silencing"
            evidence=IDA] [GO:0042659 "regulation of cell fate specification"
            evidence=IMP] [GO:0007525 "somatic muscle development"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
            GO:GO:0042694 GO:GO:0048636 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:U31961 GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0005667
            GO:GO:0007501 GO:GO:0007494 GO:GO:0000980 GO:GO:0000122
            GO:GO:0007480 GO:GO:0007384 GO:GO:0001709 GO:GO:0007424
            GO:GO:0045570 GO:GO:0061327 GO:GO:0001706 GO:GO:0010092
            GO:GO:0007482 PDB:1B8I PDBsum:1B8I EMBL:X05723 EMBL:X05724
            EMBL:X05725 EMBL:X05727 EMBL:X76210 EMBL:BT010241 EMBL:K01963
            EMBL:K01959 EMBL:X05427 PIR:B27867 PIR:D26995 RefSeq:NP_536748.1
            RefSeq:NP_536752.1 RefSeq:NP_732171.1 RefSeq:NP_732172.1
            RefSeq:NP_732173.1 RefSeq:NP_996219.1 UniGene:Dm.21668
            ProteinModelPortal:P83949 SMR:P83949 DIP:DIP-33048N IntAct:P83949
            MINT:MINT-86744 STRING:P83949 PaxDb:P83949 PRIDE:P83949
            EnsemblMetazoa:FBtr0083347 GeneID:42034 KEGG:dme:Dmel_CG10388
            CTD:42034 FlyBase:FBgn0003944 eggNOG:NOG252841 InParanoid:P83949
            OMA:WMAIAGK PhylomeDB:P83949 ChiTaRS:Ubx EvolutionaryTrace:P83949
            GenomeRNAi:42034 NextBio:826845 Bgee:P83949 GermOnline:CG10388
            GO:GO:0035052 GO:GO:0060969 Uniprot:P83949
        Length = 389

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 31/46 (67%), Positives = 33/46 (71%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             GL RR R  YT  Q LELEKEFH N YL R RRIE+A +L LTERQ
Sbjct:   293 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQ 338


>UNIPROTKB|P83950 [details] [associations]
            symbol:Ubx "Homeotic protein ultrabithorax" species:7240
            "Drosophila simulans" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:AF099983 EMBL:AF099980 EMBL:AF099981 EMBL:AF099982
            ProteinModelPortal:P83950 SMR:P83950 FlyBase:FBgn0014820
            Uniprot:P83950
        Length = 389

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 31/46 (67%), Positives = 33/46 (71%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             GL RR R  YT  Q LELEKEFH N YL R RRIE+A +L LTERQ
Sbjct:   293 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQ 338


>ZFIN|ZDB-GENE-000822-1 [details] [associations]
            symbol:hoxc6b "homeo box C6b" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-1 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:CABZ01085067 IPI:IPI00484929
            Ensembl:ENSDART00000067698 OMA:EIANTLC ArrayExpress:F1RAL1
            Bgee:F1RAL1 Uniprot:F1RAL1
        Length = 228

 Score = 132 (51.5 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 28/43 (65%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RR R  Y+  Q LELEKEFH+N+YL R RRIEIA +L L+ERQ
Sbjct:   137 RRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQ 179


>UNIPROTKB|P50219 [details] [associations]
            symbol:MNX1 "Motor neuron and pancreas homeobox protein 1"
            species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0021520 "spinal cord
            motor neuron cell fate specification" evidence=IEA] [GO:0021675
            "nerve development" evidence=IEA] [GO:0021904 "dorsal/ventral
            neural tube patterning" evidence=IEA] [GO:0031018 "endocrine
            pancreas development" evidence=IEA] [GO:0060539 "diaphragm
            development" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=TAS]
            [GO:0006959 "humoral immune response" evidence=TAS] [GO:0009653
            "anatomical structure morphogenesis" evidence=TAS]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008045 GO:GO:0009791
            GO:GO:0021675 GO:GO:0006959 GO:GO:0031018 GO:GO:0009653
            GO:GO:0060539 GO:GO:0021904 GO:GO:0021520 EMBL:U07664 EMBL:U07663
            EMBL:AC006357 EMBL:AH007909 IPI:IPI00030703 RefSeq:NP_005506.3
            UniGene:Hs.37035 ProteinModelPortal:P50219 SMR:P50219 STRING:P50219
            PhosphoSite:P50219 DMDM:259016336 PaxDb:P50219 PRIDE:P50219
            DNASU:3110 Ensembl:ENST00000252971 GeneID:3110 KEGG:hsa:3110
            UCSC:uc003wna.3 CTD:3110 GeneCards:GC07M156786 H-InvDB:HIX0033536
            HGNC:HGNC:4979 MIM:142994 MIM:176450 neXtProt:NX_P50219
            Orphanet:1552 PharmGKB:PA162396041 eggNOG:NOG322049
            HOGENOM:HOG000234345 HOVERGEN:HBG051910 InParanoid:P50219 KO:K08025
            PhylomeDB:P50219 GenomeRNAi:3110 NextBio:12341 ArrayExpress:P50219
            Bgee:P50219 CleanEx:HS_MNX1 Genevestigator:P50219
            GermOnline:ENSG00000130675 Uniprot:P50219
        Length = 401

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   239 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 284


>RGD|1588091 [details] [associations]
            symbol:Hlxb9 "homeobox gene HB9" species:10116 "Rattus
            norvegicus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] REFSEQ:NM_001271274
            Ncbi:NP_001258203
        Length = 403

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   239 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 284


>UNIPROTKB|F1SHV7 [details] [associations]
            symbol:MNX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060539 "diaphragm
            development" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0021904 "dorsal/ventral neural tube
            patterning" evidence=IEA] [GO:0021675 "nerve development"
            evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
            specification" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0008045 GO:GO:0009791 GO:GO:0021675
            GO:GO:0031018 GO:GO:0060539 GO:GO:0021904
            GeneTree:ENSGT00660000095141 GO:GO:0021520 KO:K08025 OMA:YNSSDCS
            EMBL:CU928638 RefSeq:XP_003134570.1 Ensembl:ENSSSCT00000017867
            GeneID:100511165 KEGG:ssc:100511165 Uniprot:F1SHV7
        Length = 404

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   242 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 287


>MGI|MGI:109160 [details] [associations]
            symbol:Mnx1 "motor neuron and pancreas homeobox 1"
            species:10090 "Mus musculus" [GO:0001764 "neuron migration"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008045 "motor neuron axon guidance" evidence=IMP] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0021520 "spinal cord
            motor neuron cell fate specification" evidence=IMP] [GO:0021675
            "nerve development" evidence=IMP] [GO:0021904 "dorsal/ventral
            neural tube patterning" evidence=IDA] [GO:0021953 "central nervous
            system neuron differentiation" evidence=IMP] [GO:0030182 "neuron
            differentiation" evidence=IMP] [GO:0031016 "pancreas development"
            evidence=IMP] [GO:0031018 "endocrine pancreas development"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048667 "cell morphogenesis involved in neuron
            differentiation" evidence=IMP] [GO:0048812 "neuron projection
            morphogenesis" evidence=IMP] [GO:0060539 "diaphragm development"
            evidence=IMP] [GO:0060541 "respiratory system development"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:109160 GO:GO:0005634 GO:GO:0001764
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008045
            GO:GO:0009791 GO:GO:0021675 GO:GO:0031018 GO:GO:0060539
            GO:GO:0021904 GeneTree:ENSGT00660000095141 GO:GO:0021520
            eggNOG:NOG322049 HOGENOM:HOG000234345 HOVERGEN:HBG051910
            EMBL:AF153046 EMBL:AC164700 IPI:IPI00138194 UniGene:Mm.103760
            ProteinModelPortal:Q9QZW9 SMR:Q9QZW9 STRING:Q9QZW9
            PhosphoSite:Q9QZW9 PRIDE:Q9QZW9 Ensembl:ENSMUST00000001608
            InParanoid:Q9QZW9 Bgee:Q9QZW9 CleanEx:MM_MNX1 Genevestigator:Q9QZW9
            GermOnline:ENSMUSG00000001566 Uniprot:Q9QZW9
        Length = 404

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELE +F  NKYL RP+R E+A SL LTE Q
Sbjct:   239 GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQ 284


>FB|FBgn0001077 [details] [associations]
            symbol:ftz "fushi tarazu" species:7227 "Drosophila
            melanogaster" [GO:0007506 "gonadal mesoderm development"
            evidence=IMP] [GO:0008354 "germ cell migration" evidence=IMP]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS;IMP] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IEA;IC;NAS] [GO:0001077 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in positive regulation of transcription"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0000980 "RNA
            polymerase II distal enhancer sequence-specific DNA binding"
            evidence=IDA] [GO:0007366 "periodic partitioning by pair rule gene"
            evidence=NAS;TAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=NAS] [GO:0007350 "blastoderm segmentation" evidence=TAS]
            [GO:0001708 "cell fate specification" evidence=TAS] [GO:0007417
            "central nervous system development" evidence=TAS] [GO:0035289
            "posterior head segmentation" evidence=TAS] [GO:0035290 "trunk
            segmentation" evidence=TAS] [GO:0035282 "segmentation"
            evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
            GO:GO:0007417 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
            GO:GO:0003705 GO:GO:0007506 GO:GO:0000980 GO:GO:0001077
            GO:GO:0000122 GO:GO:0007366 EMBL:AE001572 GO:GO:0035289
            GO:GO:0008354 GO:GO:0035290 PDB:2XHS PDBsum:2XHS EMBL:X00854
            EMBL:BT022173 EMBL:X78905 EMBL:K01947 PIR:A93334 RefSeq:NP_477498.1
            UniGene:Dm.24032 PDB:1FTZ PDBsum:1FTZ ProteinModelPortal:P02835
            SMR:P02835 DIP:DIP-18500N IntAct:P02835 MINT:MINT-156974
            STRING:P02835 EnsemblMetazoa:FBtr0081625 GeneID:40834
            KEGG:dme:Dmel_CG2047 CTD:40834 FlyBase:FBgn0001077 eggNOG:NOG249057
            InParanoid:P02835 OMA:NRYITRR OrthoDB:EOG44TMQT PhylomeDB:P02835
            EvolutionaryTrace:P02835 GenomeRNAi:40834 NextBio:820846
            Bgee:P02835 GermOnline:CG2047 InterPro:IPR005567 Pfam:PF03867
            Uniprot:P02835
        Length = 410

 Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 27/43 (62%), Positives = 33/43 (76%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R R  YT  Q LELEKEFHFN+Y+ R RRI+IA +L L+ERQ
Sbjct:   255 KRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQ 297


>UNIPROTKB|J9NYN6 [details] [associations]
            symbol:HOXD1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 OMA:GDGAFVS EMBL:AAEX03017793
            Ensembl:ENSCAFT00000048782 Uniprot:J9NYN6
        Length = 248

 Score = 133 (51.9 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 27/41 (65%), Positives = 31/41 (75%)

Query:    81 LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +RT ++  QL ELEKEFHFNKYL R RRIEIA SL L + Q
Sbjct:   152 IRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQ 192


>RGD|2812 [details] [associations]
            symbol:Hoxa1 "homeo box A1" species:10116 "Rattus norvegicus"
          [GO:0003700 "sequence-specific DNA binding transcription factor
          activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
          [GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006357
          "regulation of transcription from RNA polymerase II promoter"
          evidence=ISO] [GO:0007275 "multicellular organismal development"
          evidence=IEA] [GO:0007399 "nervous system development" evidence=ISO]
          [GO:0007605 "sensory perception of sound" evidence=ISO] [GO:0007634
          "optokinetic behavior" evidence=ISO] [GO:0008045 "motor neuron axon
          guidance" evidence=ISO] [GO:0009653 "anatomical structure
          morphogenesis" evidence=ISO] [GO:0009952 "anterior/posterior pattern
          specification" evidence=ISO] [GO:0021569 "rhombomere 3 development"
          evidence=ISO] [GO:0021570 "rhombomere 4 development" evidence=ISO]
          [GO:0021571 "rhombomere 5 development" evidence=ISO] [GO:0021599
          "abducens nerve formation" evidence=ISO] [GO:0021612 "facial nerve
          structural organization" evidence=ISO] [GO:0021754 "facial nucleus
          development" evidence=ISO] [GO:0021953 "central nervous system neuron
          differentiation" evidence=ISO] [GO:0030902 "hindbrain development"
          evidence=ISO] [GO:0042472 "inner ear morphogenesis" evidence=ISO]
          [GO:0042473 "outer ear morphogenesis" evidence=ISO] [GO:0043565
          "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
          regulation of transcription from RNA polymerase II promoter"
          evidence=ISO] [GO:0048646 "anatomical structure formation involved in
          morphogenesis" evidence=ISO] [GO:0048702 "embryonic neurocranium
          morphogenesis" evidence=ISO] [GO:0048839 "inner ear development"
          evidence=ISO] [GO:0048844 "artery morphogenesis" evidence=ISO]
          [GO:0050795 "regulation of behavior" evidence=ISO] [GO:0050890
          "cognition" evidence=ISO] [GO:0050905 "neuromuscular process"
          evidence=ISO] [GO:0060840 "artery development" evidence=ISO]
          [GO:0060876 "semicircular canal formation" evidence=ISO] [GO:0090102
          "cochlea development" evidence=ISO] [GO:0090103 "cochlea
          morphogenesis" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
          InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
          PROSITE:PS50071 SMART:SM00389 RGD:2812 GO:GO:0005634 GO:GO:0009952
          GO:GO:0050795 GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
          GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008045
          GO:GO:0007605 GO:GO:0050905 GO:GO:0048844 GO:GO:0090103 GO:GO:0021612
          GO:GO:0042473 GO:GO:0021571 GO:GO:0021754 eggNOG:NOG236971 KO:K09301
          HOGENOM:HOG000247020 HOVERGEN:HBG006089 OrthoDB:EOG47H5QN CTD:3198
          GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634 GO:GO:0021569
          GO:GO:0021570 GO:GO:0060876 EMBL:U93092 IPI:IPI00324676
          RefSeq:NP_037207.1 UniGene:Rn.228589 UniGene:Rn.9780
          ProteinModelPortal:O08656 SMR:O08656 STRING:O08656 GeneID:25607
          KEGG:rno:25607 UCSC:RGD:2812 InParanoid:O08656 NextBio:607335
          Genevestigator:O08656 GermOnline:ENSRNOG00000005628 Uniprot:O08656
        Length = 333

 Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 30/46 (65%), Positives = 32/46 (69%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G P  +RT +T  QL ELEKEFHFNKYL R R  EIAASL L E Q
Sbjct:   226 GQPNAVRTNFTTKQLTELEKEFHFNKYLTRARS-EIAASLQLNETQ 270


>ZFIN|ZDB-GENE-000822-2 [details] [associations]
            symbol:hoxc1a "homeo box C1a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-2 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104446 EMBL:AJ306432 EMBL:BX005254
            EMBL:DQ060550 EMBL:AF071263 IPI:IPI00507708 RefSeq:NP_571606.1
            UniGene:Dr.83047 ProteinModelPortal:Q98SH9 SMR:Q98SH9
            Ensembl:ENSDART00000103131 GeneID:58046 KEGG:dre:58046 CTD:58046
            eggNOG:KOG0489 HOVERGEN:HBG094309 InParanoid:A2BE59
            NextBio:20892310 ArrayExpress:Q98SH9 Bgee:Q98SH9 Uniprot:Q98SH9
        Length = 302

 Score = 134 (52.2 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 28/40 (70%), Positives = 30/40 (75%)

Query:    82 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RT +T  QL ELEKEFHFNKYL R RRIEIA  L L+E Q
Sbjct:   219 RTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQ 258


>UNIPROTKB|F6USR4 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
            specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
            EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
            IPI:IPI00821029 ProteinModelPortal:F6USR4
            Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
        Length = 154

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 27/44 (61%), Positives = 32/44 (72%)

Query:    78 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             PR+ RTA+T  Q+ ELE EF  + YL R RR EIA +LDLTERQ
Sbjct:    37 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQ 80


>FB|FBgn0025776 [details] [associations]
            symbol:ind "intermediate neuroblasts defective" species:7227
            "Drosophila melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS;IDA] [GO:0010629
            "negative regulation of gene expression" evidence=IMP] [GO:0007417
            "central nervous system development" evidence=NAS;IMP] [GO:0007419
            "ventral cord development" evidence=NAS;TAS] [GO:0007400
            "neuroblast fate determination" evidence=TAS] [GO:0009953
            "dorsal/ventral pattern formation" evidence=TAS] [GO:0007398
            "ectoderm development" evidence=TAS] [GO:0007420 "brain
            development" evidence=TAS] [GO:0007389 "pattern specification
            process" evidence=NAS] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0007420 EMBL:AE014296
            GO:GO:0043565 GO:GO:0007419 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007400
            GO:GO:0000122 GO:GO:0009953 GO:GO:0007398 KO:K09310 HSSP:P14653
            FlyBase:FBgn0025776 EMBL:BT029146 EMBL:BK002146 RefSeq:NP_996087.1
            UniGene:Dm.1954 SMR:Q7KUL4 STRING:Q7KUL4 GeneID:2768974
            KEGG:dme:Dmel_CG11551 UCSC:CG11551-RA InParanoid:Q7KUL4 OMA:FKHESSC
            GenomeRNAi:2768974 NextBio:848895 Uniprot:Q7KUL4
        Length = 391

 Score = 135 (52.6 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 28/43 (65%), Positives = 35/43 (81%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +R+RTA+T+TQLLELE+EF  N YL R RRIEIA  L L+E+Q
Sbjct:   299 KRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQ 341


>FB|FBgn0002522 [details] [associations]
            symbol:lab "labial" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0046982 "protein heterodimerization activity"
            evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IPI] [GO:0007420 "brain development" evidence=IGI;IMP]
            [GO:0009790 "embryo development" evidence=IMP] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS;NAS;TAS] [GO:0007494
            "midgut development" evidence=TAS] [GO:0030154 "cell
            differentiation" evidence=TAS] [GO:0001709 "cell fate
            determination" evidence=TAS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0035284 "brain segmentation"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0007494 GO:GO:0009790 EMBL:AE001572 GO:GO:0001709
            GO:GO:0035284 eggNOG:NOG236971 KO:K09301 EMBL:X13103 EMBL:X13104
            EMBL:X13105 EMBL:X13106 EMBL:AY095089 EMBL:M13570 PIR:A30168
            PIR:S01164 RefSeq:NP_476613.1 UniGene:Dm.4752
            ProteinModelPortal:P10105 SMR:P10105 DIP:DIP-59868N STRING:P10105
            GeneID:40817 KEGG:dme:Dmel_CG1264 UCSC:CG1264-RA CTD:40817
            FlyBase:FBgn0002522 HOGENOM:HOG000263879 InParanoid:P10105
            OMA:ISSENGM OrthoDB:EOG4D7WP6 GenomeRNAi:40817 NextBio:820739
            Bgee:P10105 GermOnline:CG1264 Uniprot:P10105
        Length = 635

 Score = 138 (53.6 bits), Expect = 2.4e-08, P = 2.4e-08
 Identities = 28/40 (70%), Positives = 31/40 (77%)

Query:    82 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             RT +TN QL ELEKEFHFN+YL R RRIEIA +L L E Q
Sbjct:   511 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 550


>UNIPROTKB|E1B7N3 [details] [associations]
            symbol:HOXD1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09301 CTD:3231
            OMA:GDGAFVS EMBL:DAAA02004173 IPI:IPI00698903 RefSeq:XP_002685353.1
            UniGene:Bt.104076 Ensembl:ENSBTAT00000021043 GeneID:100295780
            KEGG:bta:100295780 Uniprot:E1B7N3
        Length = 322

 Score = 133 (51.9 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 27/41 (65%), Positives = 31/41 (75%)

Query:    81 LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             +RT ++  QL ELEKEFHFNKYL R RRIEIA SL L + Q
Sbjct:   226 IRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQ 266


>UNIPROTKB|H9L2H7 [details] [associations]
            symbol:Gga.20677 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104054 EMBL:AADN02023992
            Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
        Length = 95

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             R+ R  YT  Q LELEKEF FN YL R RR+EI+ S++LT+RQ
Sbjct:    22 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQ 64


>UNIPROTKB|H9L2H8 [details] [associations]
            symbol:Gga.20677 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104054 EMBL:AADN02023992
            Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
        Length = 99

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             R+ R  YT  Q LELEKEF FN YL R RR+EI+ S++LT+RQ
Sbjct:    26 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQ 68


>MGI|MGI:96201 [details] [associations]
            symbol:Hoxd1 "homeobox D1" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:96201 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG006089
            eggNOG:NOG314488 OrthoDB:EOG4DV5N0 EMBL:X60034 EMBL:M87802
            IPI:IPI00785330 PIR:A56553 UniGene:Mm.4932
            ProteinModelPortal:Q01822 SMR:Q01822 STRING:Q01822 PRIDE:Q01822
            InParanoid:Q01822 CleanEx:MM_HOXD1 Genevestigator:Q01822
            GermOnline:ENSMUSG00000042448 Uniprot:Q01822
        Length = 327

 Score = 133 (51.9 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 27/44 (61%), Positives = 31/44 (70%)

Query:    78 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             P  +RT ++  QL ELEKEFHFNKYL R RRIEIA  L L + Q
Sbjct:   228 PSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQ 271


>FB|FBgn0041156 [details] [associations]
            symbol:exex "extra-extra" species:7227 "Drosophila
            melanogaster" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007417 "central nervous system
            development" evidence=IMP] [GO:0007412 "axon target recognition"
            evidence=IMP] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0046331 "lateral inhibition" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 EMBL:AE014296 GO:GO:0043565 GO:GO:0007417
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0046331 GO:GO:0007412
            GeneTree:ENSGT00660000095141 eggNOG:NOG322049 HSSP:P14653
            EMBL:AY084165 RefSeq:NP_648164.1 UniGene:Dm.5205 SMR:Q9VSC2
            STRING:Q9VSC2 EnsemblMetazoa:FBtr0076751 GeneID:38884
            KEGG:dme:Dmel_CG8254 UCSC:CG8254-RA CTD:38884 FlyBase:FBgn0041156
            InParanoid:Q9VSC2 OMA:HHRIPEL OrthoDB:EOG431ZFJ GenomeRNAi:38884
            NextBio:810844 Uniprot:Q9VSC2
        Length = 525

 Score = 136 (52.9 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 28/46 (60%), Positives = 35/46 (76%)

Query:    76 GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             G  RR RTA+T+ QLLELEK+F  NKYL RP+R E+A+ L L+E Q
Sbjct:   437 GKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQ 482


>UNIPROTKB|P24341 [details] [associations]
            symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
            PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
            eggNOG:KOG0487 Uniprot:P24341
        Length = 95

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             R+ R  YT  Q LELEKEF FN YL R RR+EI+ S++LT+RQ
Sbjct:    22 RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQ 64


>UNIPROTKB|F1NE14 [details] [associations]
            symbol:LOC100858551 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
            formation" evidence=IEA] [GO:0030879 "mammary gland development"
            evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
            GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00682592
            Ensembl:ENSGALT00000018035 Uniprot:F1NE14
        Length = 169

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 27/43 (62%), Positives = 30/43 (69%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             R+ R  YT  Q LELEKEF FN YL R RR E+A  L+LTERQ
Sbjct:   104 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQ 146


>UNIPROTKB|F1NE15 [details] [associations]
            symbol:LOC100858551 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
            formation" evidence=IEA] [GO:0030879 "mammary gland development"
            evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
            GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
            Ensembl:ENSGALT00000018034 Uniprot:F1NE15
        Length = 60

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 27/43 (62%), Positives = 30/43 (69%)

Query:    79 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 121
             R+ R  YT  Q LELEKEF FN YL R RR E+A  L+LTERQ
Sbjct:     2 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQ 44

WARNING:  HSPs involving 515 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      166        88   0.00091  102 3  11 22  0.41    29
                                                     29  0.49    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  765
  No. of states in DFA:  515 (55 KB)
  Total size of DFA:  98 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  7.72u 0.07s 7.79t   Elapsed:  00:00:20
  Total cpu time:  7.74u 0.07s 7.81t   Elapsed:  00:00:21
  Start:  Thu Aug 15 12:47:34 2013   End:  Thu Aug 15 12:47:55 2013
WARNINGS ISSUED:  2

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