BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16797
(99 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P02831|HXA3_MOUSE Homeobox protein Hox-A3 OS=Mus musculus GN=Hoxa3 PE=1 SV=2
Length = 443
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 46/61 (75%)
Query: 17 KKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKK 76
+ KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK K
Sbjct: 189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248
Query: 77 K 77
K
Sbjct: 249 K 249
>sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens GN=HOXA3 PE=2 SV=1
Length = 443
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 46/61 (75%)
Query: 17 KKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKK 76
+ KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 77 K 77
K
Sbjct: 248 K 248
>sp|Q08DG7|HXA3_BOVIN Homeobox protein Hox-A3 OS=Bos taurus GN=HOXA3 PE=2 SV=1
Length = 442
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 46/61 (75%)
Query: 17 KKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKK 76
+ KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK K
Sbjct: 188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247
Query: 77 K 77
K
Sbjct: 248 K 248
>sp|P09026|HXB3_MOUSE Homeobox protein Hox-B3 OS=Mus musculus GN=Hoxb3 PE=2 SV=4
Length = 433
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 248
>sp|P14651|HXB3_HUMAN Homeobox protein Hox-B3 OS=Homo sapiens GN=HOXB3 PE=1 SV=2
Length = 431
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 189 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 245
>sp|Q1KKX7|HXB3A_TAKRU Homeobox protein Hox-B3a OS=Takifugu rubripes GN=hoxb3a PE=3 SV=1
Length = 474
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 213 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 269
>sp|P31249|HXD3_HUMAN Homeobox protein Hox-D3 OS=Homo sapiens GN=HOXD3 PE=1 SV=3
Length = 432
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 38/57 (66%), Positives = 44/57 (77%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KR RTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 195 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>sp|O93353|HXA3_CHICK Homeobox protein Hox-A3 OS=Gallus gallus GN=HOXA3 PE=2 SV=2
Length = 413
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 46/61 (75%)
Query: 17 KKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKK 76
+ KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK K
Sbjct: 170 QTSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229
Query: 77 K 77
K
Sbjct: 230 K 230
>sp|P09027|HXD3_MOUSE Homeobox protein Hox-D3 OS=Mus musculus GN=Hoxd3 PE=2 SV=4
Length = 433
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/57 (66%), Positives = 44/57 (77%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KR RTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 196 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 252
>sp|Q9IA21|HXA3_HETFR Homeobox protein Hox-A3 OS=Heterodontus francisci GN=HOXA3 PE=3
SV=1
Length = 410
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 169 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 225
>sp|Q3V5Z9|HXD3_ORYLA Homeobox protein Hox-D3 OS=Oryzias latipes GN=hoxd3a PE=3 SV=1
Length = 395
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 13 IADEKK----GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWF 68
++DEK KR RTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWF
Sbjct: 149 VSDEKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWF 208
Query: 69 QNRRMKKKK 77
QNRRMK KK
Sbjct: 209 QNRRMKYKK 217
>sp|O42367|HXB2A_DANRE Homeobox protein Hox-B2a OS=Danio rerio GN=hoxb2a PE=2 SV=2
Length = 390
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 15 DEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMK 74
D G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK
Sbjct: 153 DNVSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMK 212
Query: 75 KKKGKT 80
K+ T
Sbjct: 213 HKRQTT 218
>sp|Q1KKS7|HXD3A_TAKRU Homeobox protein Hox-D3a OS=Takifugu rubripes GN=hoxd3a PE=3 SV=1
Length = 408
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 13 IADEKK----GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWF 68
++DEK KR RTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWF
Sbjct: 164 VSDEKSPPGPSSKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWF 223
Query: 69 QNRRMKKKK 77
QNRRMK KK
Sbjct: 224 QNRRMKYKK 232
>sp|Q8AWZ2|HXA3A_DANRE Homeobox protein Hox-A3a OS=Danio rerio GN=hoxa3a PE=2 SV=1
Length = 410
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 164 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 220
>sp|P50901|HOX3_BRAFL Homeobox protein HOX3 OS=Branchiostoma floridae PE=2 SV=1
Length = 411
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 136 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKK 192
>sp|Q1KL12|HXA3A_TAKRU Homeobox protein Hox-A3a OS=Takifugu rubripes GN=hoxa3a PE=3 SV=1
Length = 417
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 171 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 227
>sp|A8DT10|HXD3_HAPBU Homeobox protein Hox-D3 OS=Haplochromis burtoni GN=hoxd3a PE=3 SV=1
Length = 404
Score = 79.7 bits (195), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 9 DDSLIADEKK----GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQI 64
D ++DEK KR +TAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQI
Sbjct: 154 DGGEVSDEKSPPGPASKRVKTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQI 213
Query: 65 KIWFQNRRMKKKK 77
KIWFQNRRMK KK
Sbjct: 214 KIWFQNRRMKYKK 226
>sp|P31245|HXA2_MOUSE Homeobox protein Hox-A2 OS=Mus musculus GN=Hoxa2 PE=2 SV=1
Length = 372
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKG 78
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 138 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 197
Query: 79 KTPEDN 84
++N
Sbjct: 198 TQCKEN 203
>sp|P34684|LIN39_CAEEL Homeobox protein lin-39 OS=Caenorhabditis elegans GN=lin-39 PE=2
SV=1
Length = 253
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 17 KKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKK 76
+G+KR RTAYT NQ+L LEKEF+ Y+ R +R ++A L L ERQ+KIWFQNRRMK K
Sbjct: 162 SRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHK 221
Query: 77 K 77
K
Sbjct: 222 K 222
>sp|P23682|HXB3_CHICK Homeobox protein Hox-B3 OS=Gallus gallus GN=HOXB3 PE=2 SV=2
Length = 399
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 160 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 216
>sp|P0C1T1|HXB2_MOUSE Homeobox protein Hox-B2 OS=Mus musculus GN=Hoxb2 PE=2 SV=1
Length = 354
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 140 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 198
>sp|O42368|HXB3A_DANRE Homeobox protein Hox-B3a OS=Danio rerio GN=hoxb3a PE=2 SV=3
Length = 417
Score = 79.3 bits (194), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 181 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 237
>sp|O42370|HXD3A_DANRE Homeobox protein Hox-D3a OS=Danio rerio GN=hoxd3a PE=2 SV=2
Length = 396
Score = 79.3 bits (194), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/57 (66%), Positives = 44/57 (77%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KR RTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 162 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 218
>sp|P14652|HXB2_HUMAN Homeobox protein Hox-B2 OS=Homo sapiens GN=HOXB2 PE=1 SV=1
Length = 356
Score = 79.3 bits (194), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 142 GARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 200
>sp|Q9BZM3|GSX2_HUMAN GS homeobox 2 OS=Homo sapiens GN=GSX2 PE=2 SV=2
Length = 304
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 14 ADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRM 73
A + KR RTA+TS QLL LE+EF+ Y+ R +R ++A LNL E+Q+KIWFQNRR+
Sbjct: 196 ASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRV 255
Query: 74 K-KKKGKTPEDN 84
K KK+GK + N
Sbjct: 256 KHKKEGKGTQRN 267
>sp|P31246|HXA2_RAT Homeobox protein Hox-A2 OS=Rattus norvegicus GN=Hoxa2 PE=2 SV=1
Length = 372
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKG 78
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 138 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 197
Query: 79 KTPEDN 84
++N
Sbjct: 198 TQCKEN 203
>sp|A9L937|HXA2_PAPAN Homeobox protein Hox-A2 OS=Papio anubis GN=HOXA2 PE=3 SV=1
Length = 377
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKG 78
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 143 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 202
Query: 79 KTPEDN 84
++N
Sbjct: 203 TQCKEN 208
>sp|O43364|HXA2_HUMAN Homeobox protein Hox-A2 OS=Homo sapiens GN=HOXA2 PE=1 SV=1
Length = 376
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKG 78
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 142 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 201
Query: 79 KTPEDN 84
++N
Sbjct: 202 TQCKEN 207
>sp|Q6IEI0|HXB2A_TAKRU Homeobox protein Hox-B2a OS=Takifugu rubripes GN=hoxb2a PE=3 SV=1
Length = 415
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 172 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 230
>sp|Q0VCS4|HXA2_BOVIN Homeobox protein Hox-A2 OS=Bos taurus GN=HOXA2 PE=2 SV=1
Length = 372
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKG 78
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 138 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 197
Query: 79 KTPEDN 84
++N
Sbjct: 198 TQCKEN 203
>sp|P31316|GSX2_MOUSE GS homeobox 2 OS=Mus musculus GN=Gsx2 PE=2 SV=2
Length = 305
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMK-KKKGK 79
KR RTA+TS QLL LE+EF+ Y+ R +R ++A LNL E+Q+KIWFQNRR+K KK+GK
Sbjct: 204 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGK 263
Query: 80 TPEDN 84
N
Sbjct: 264 GASRN 268
>sp|P09089|ZEN1_DROME Protein zerknuellt 1 OS=Drosophila melanogaster GN=zen PE=1 SV=1
Length = 353
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KR+RTA+TS QL+ LE EF Y+ R +R ++A+ L+LCERQ+KIWFQNRRMK KK
Sbjct: 91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 147
>sp|B0VXK3|HXA2_CALJA Homeobox protein Hox-A2 OS=Callithrix jacchus GN=HOXA2 PE=3 SV=1
Length = 375
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKG 78
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 141 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 200
Query: 79 KTPEDN 84
++N
Sbjct: 201 TQCKEN 206
>sp|Q1KL11|HXA2A_TAKRU Homeobox protein Hox-A2a OS=Takifugu rubripes GN=hoxa2a PE=3 SV=1
Length = 363
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKGKT 80
+R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 138 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 197
Query: 81 PEDN 84
++N
Sbjct: 198 SKEN 201
>sp|A1L2P5|HXD3_XENLA Homeobox protein Hox-D3 OS=Xenopus laevis GN=hoxd3 PE=2 SV=1
Length = 413
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/57 (66%), Positives = 44/57 (77%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KR RTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 179 KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 235
>sp|P48590|FTZ_DROHY Segmentation protein fushi tarazu OS=Drosophila hydei GN=ftz PE=3
SV=1
Length = 456
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 45/68 (66%)
Query: 13 IADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRR 72
IA + K KR R Y+ Q L LEKEF+ YI R +R +A LNL ERQIKIWFQNRR
Sbjct: 276 IASDCKDSKRTRQTYSRYQTLELEKEFHFNRYITRRRRMDIAHALNLSERQIKIWFQNRR 335
Query: 73 MKKKKGKT 80
MK KK +T
Sbjct: 336 MKSKKDRT 343
>sp|O42365|HXA2B_DANRE Homeobox protein Hox-A2b OS=Danio rerio GN=hoxa2b PE=2 SV=2
Length = 363
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 13 IADEKKG-KKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNR 71
I+D G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNR
Sbjct: 125 ISDGGSGATRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNR 184
Query: 72 RMKKKKGKTPEDN 84
RMK K+ ++N
Sbjct: 185 RMKHKRQTQCKEN 197
>sp|P31264|HMPB_DROME Homeotic protein proboscipedia OS=Drosophila melanogaster GN=pb
PE=2 SV=2
Length = 782
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
+R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
>sp|P31247|HXB3_XENLA Homeobox protein Hox-B3 (Fragment) OS=Xenopus laevis GN=hoxb3
PE=3 SV=1
Length = 60
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KRARTAYTS QL+ LEKEF+ Y+ R +R ++A LNL ERQIKIWFQNRRMK KK
Sbjct: 2 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 58
>sp|P14837|PDX1_XENLA Pancreas/duodenum homeobox protein 1 OS=Xenopus laevis GN=pdx1 PE=2
SV=2
Length = 271
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 6 KYLDDSLIADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIK 65
++ D S I E++ KR RTAYT QLL LEKEF YI R +R +LA LNL ER IK
Sbjct: 134 QWTDGSYIM-EQEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIK 192
Query: 66 IWFQNRRMKKKK 77
IWFQNRRMK KK
Sbjct: 193 IWFQNRRMKWKK 204
>sp|P52947|PDX1_RAT Pancreas/duodenum homeobox protein 1 OS=Rattus norvegicus GN=Pdx1
PE=2 SV=1
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 44/64 (68%)
Query: 14 ADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRM 73
A E + KR RTAYT QLL LEKEF YI R +R +LA LNL ER IKIWFQNRRM
Sbjct: 140 AAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRM 199
Query: 74 KKKK 77
K KK
Sbjct: 200 KWKK 203
>sp|Q24648|ZEN_DROSU Protein zerknuellt OS=Drosophila subobscura GN=zen PE=3 SV=1
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKK 77
KR+RTA+TS QL+ LE EF Y+ R +R ++A+ L+LCERQ+KIWFQNRRMK KK
Sbjct: 89 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 145
>sp|P17487|HM12_CAEEL Homeobox protein ceh-12 OS=Caenorhabditis elegans GN=ceh-12 PE=4
SV=2
Length = 180
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 8 LDDSLIADEKKGK-KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKI 66
L S+ A + GK +R RTA++S QL+ LEK+F+ Y+ R +R+QLA++L+L E QIKI
Sbjct: 97 LTYSVNAWQAWGKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKI 156
Query: 67 WFQNRRMKKKKGKT 80
WFQNRRMK K+ +
Sbjct: 157 WFQNRRMKNKRCPS 170
>sp|P52945|PDX1_HUMAN Pancreas/duodenum homeobox protein 1 OS=Homo sapiens GN=PDX1 PE=1
SV=1
Length = 283
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 44/64 (68%)
Query: 14 ADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRM 73
A E + KR RTAYT QLL LEKEF YI R +R +LA LNL ER IKIWFQNRRM
Sbjct: 140 AAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRM 199
Query: 74 KKKK 77
K KK
Sbjct: 200 KWKK 203
>sp|A1YF08|PDX1_GORGO Pancreas/duodenum homeobox protein 1 OS=Gorilla gorilla gorilla
GN=PDX1 PE=3 SV=1
Length = 284
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 44/64 (68%)
Query: 14 ADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRM 73
A E + KR RTAYT QLL LEKEF YI R +R +LA LNL ER IKIWFQNRRM
Sbjct: 141 AAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRM 200
Query: 74 KKKK 77
K KK
Sbjct: 201 KWKK 204
>sp|P06602|EVE_DROME Segmentation protein even-skipped OS=Drosophila melanogaster GN=eve
PE=1 SV=3
Length = 376
Score = 75.5 bits (184), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 21 KRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKGK 79
+R RTA+T +QL LEKEF ++NY+ R +R +LA +LNL E IK+WFQNRRMK K+ +
Sbjct: 71 RRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQR 129
>sp|A1YG85|PDX1_PANPA Pancreas/duodenum homeobox protein 1 OS=Pan paniscus GN=PDX1 PE=3
SV=1
Length = 283
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 44/64 (68%)
Query: 14 ADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRM 73
A E + KR RTAYT QLL LEKEF YI R +R +LA LNL ER IKIWFQNRRM
Sbjct: 140 AAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRM 199
Query: 74 KKKK 77
K KK
Sbjct: 200 KWKK 203
>sp|A2T756|PDX1_PANTR Pancreas/duodenum homeobox protein 1 OS=Pan troglodytes GN=PDX1
PE=3 SV=1
Length = 283
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 44/64 (68%)
Query: 14 ADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRM 73
A E + KR RTAYT QLL LEKEF YI R +R +LA LNL ER IKIWFQNRRM
Sbjct: 140 AAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRM 199
Query: 74 KKKK 77
K KK
Sbjct: 200 KWKK 203
>sp|Q08727|HXA2_CHICK Homeobox protein Hox-A2 OS=Gallus gallus GN=HOXA2 PE=2 SV=1
Length = 375
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 19 GKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRMKKKKG 78
G +R RTAYT+ QLL LEKEF+ Y+ R +R ++A L+L ERQ+K+WFQNRRMK K+
Sbjct: 139 GSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 198
Query: 79 KTPEDN 84
++N
Sbjct: 199 TQCKEN 204
>sp|P70118|PDX1_MESAU Pancreas/duodenum homeobox protein 1 OS=Mesocricetus auratus
GN=PDX1 PE=1 SV=1
Length = 283
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 44/64 (68%)
Query: 14 ADEKKGKKRARTAYTSNQLLALEKEFNQQNYILRAKRHQLAKELNLCERQIKIWFQNRRM 73
A E + KR RTAYT QLL LEKEF YI R +R +LA LNL ER IKIWFQNRRM
Sbjct: 140 AVEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRM 199
Query: 74 KKKK 77
K KK
Sbjct: 200 KWKK 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,269,885
Number of Sequences: 539616
Number of extensions: 1257631
Number of successful extensions: 5791
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 4450
Number of HSP's gapped (non-prelim): 1389
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)