BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16800
(221 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|347972359|ref|XP_001688960.2| AGAP004649-PA [Anopheles gambiae str. PEST]
gi|333469402|gb|EDO63634.2| AGAP004649-PA [Anopheles gambiae str. PEST]
Length = 548
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 73/80 (91%), Gaps = 4/80 (5%)
Query: 124 PAALSQHQS--LLNN--SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
P+A+S HQS ++NN +GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQV
Sbjct: 409 PSAVSPHQSSFMINNNSTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANALHLNETQV 468
Query: 180 KIWFQNRRMKQKKRIKEGIL 199
KIWFQNRRMKQKKR+KEG++
Sbjct: 469 KIWFQNRRMKQKKRVKEGLI 488
>gi|195107210|ref|XP_001998208.1| GI23760 [Drosophila mojavensis]
gi|193914802|gb|EDW13669.1| GI23760 [Drosophila mojavensis]
Length = 651
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 65/68 (95%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQK
Sbjct: 508 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 567
Query: 192 KRIKEGIL 199
KR+KEG++
Sbjct: 568 KRVKEGLI 575
>gi|195389737|ref|XP_002053531.1| lab [Drosophila virilis]
gi|194151617|gb|EDW67051.1| lab [Drosophila virilis]
Length = 643
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 65/68 (95%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQK
Sbjct: 506 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 565
Query: 192 KRIKEGIL 199
KR+KEG++
Sbjct: 566 KRVKEGLI 573
>gi|37693039|gb|AAQ98855.1| homeodomain transcription factor labial [Drosophila buzzatii]
Length = 655
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 65/68 (95%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQK
Sbjct: 514 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 573
Query: 192 KRIKEGIL 199
KR+KEG++
Sbjct: 574 KRVKEGLI 581
>gi|59939347|gb|AAX12439.1| Dbuz\lab-PA [Drosophila buzzatii]
Length = 659
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 65/68 (95%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQK
Sbjct: 517 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 576
Query: 192 KRIKEGIL 199
KR+KEG++
Sbjct: 577 KRVKEGLI 584
>gi|350418159|ref|XP_003491764.1| PREDICTED: hypothetical protein LOC100744978 [Bombus impatiens]
Length = 474
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 358 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 417
Query: 194 IKEGIL 199
+KEG++
Sbjct: 418 MKEGLI 423
>gi|340727752|ref|XP_003402200.1| PREDICTED: hypothetical protein LOC100643550 [Bombus terrestris]
Length = 477
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 361 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 420
Query: 194 IKEGIL 199
+KEG++
Sbjct: 421 MKEGLI 426
>gi|383849613|ref|XP_003700439.1| PREDICTED: uncharacterized protein LOC100877608 [Megachile
rotundata]
Length = 468
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 352 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 411
Query: 194 IKEGIL 199
+KEG++
Sbjct: 412 MKEGLI 417
>gi|195498962|ref|XP_002096747.1| GE25839 [Drosophila yakuba]
gi|194182848|gb|EDW96459.1| GE25839 [Drosophila yakuba]
Length = 631
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/65 (90%), Positives = 64/65 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 504 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 563
Query: 195 KEGIL 199
KEG++
Sbjct: 564 KEGLI 568
>gi|380028371|ref|XP_003697877.1| PREDICTED: uncharacterized protein LOC100865518 [Apis florea]
Length = 501
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 385 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 444
Query: 194 IKEGIL 199
+KEG++
Sbjct: 445 MKEGLI 450
>gi|328778404|ref|XP_001120278.2| PREDICTED: hypothetical protein LOC724422 [Apis mellifera]
Length = 509
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 393 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 452
Query: 194 IKEGIL 199
+KEG++
Sbjct: 453 MKEGLI 458
>gi|195038455|ref|XP_001990673.1| GH19490 [Drosophila grimshawi]
gi|193894869|gb|EDV93735.1| GH19490 [Drosophila grimshawi]
Length = 651
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 65/68 (95%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQK
Sbjct: 515 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 574
Query: 192 KRIKEGIL 199
KR+KEG++
Sbjct: 575 KRVKEGLI 582
>gi|195152109|ref|XP_002016979.1| GL22053 [Drosophila persimilis]
gi|194112036|gb|EDW34079.1| GL22053 [Drosophila persimilis]
Length = 644
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/65 (90%), Positives = 64/65 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 512 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 571
Query: 195 KEGIL 199
KEG++
Sbjct: 572 KEGLI 576
>gi|307187176|gb|EFN72416.1| Homeotic protein labial [Camponotus floridanus]
Length = 164
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 49 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 108
Query: 194 IKEGIL 199
+KEG++
Sbjct: 109 MKEGLI 114
>gi|345489495|ref|XP_001603839.2| PREDICTED: homeobox protein Hox-B1-like [Nasonia vitripennis]
Length = 189
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 66 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 125
Query: 194 IKEGIL 199
+KEG++
Sbjct: 126 MKEGLI 131
>gi|37777297|dbj|BAC99310.1| Hox 1 [Bombyx mori]
Length = 67
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/66 (93%), Positives = 65/66 (98%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
LNN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 2 LNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 61
Query: 194 IKEGIL 199
IKEG++
Sbjct: 62 IKEGLI 67
>gi|7578842|gb|AAF64148.1|AF231103_1 labial protein [Tribolium castaneum]
gi|7578844|gb|AAF64149.1|AF231104_1 labial protein [Tribolium castaneum]
Length = 142
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 82/106 (77%), Gaps = 11/106 (10%)
Query: 105 PTSPSTDY--TTPLTALKYPPPAALS-----QHQSLLN----NSGRTNFTNKQLTELEKE 153
P P ++ T+ +AL+ P PA+ S S+L+ N+GRTNFTNKQLTELEKE
Sbjct: 1 PKIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKE 60
Query: 154 FHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
FHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR+KEG++
Sbjct: 61 FHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLI 106
>gi|242011848|ref|XP_002426656.1| predicted protein [Pediculus humanus corporis]
gi|212510820|gb|EEB13918.1| predicted protein [Pediculus humanus corporis]
Length = 359
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 67/76 (88%), Gaps = 5/76 (6%)
Query: 124 PAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWF 183
P L Q NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWF
Sbjct: 247 PGLLCQ-----NNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWF 301
Query: 184 QNRRMKQKKRIKEGIL 199
QNRRMKQKKR+KEG++
Sbjct: 302 QNRRMKQKKRVKEGLI 317
>gi|390178663|ref|XP_003736701.1| lab, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859538|gb|EIM52774.1| lab, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 257
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/65 (90%), Positives = 64/65 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 120 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 179
Query: 195 KEGIL 199
KEG++
Sbjct: 180 KEGLI 184
>gi|322799503|gb|EFZ20811.1| hypothetical protein SINV_07039 [Solenopsis invicta]
Length = 160
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/66 (90%), Positives = 64/66 (96%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR
Sbjct: 45 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKR 104
Query: 194 IKEGIL 199
+KEG++
Sbjct: 105 MKEGLI 110
>gi|321475851|gb|EFX86813.1| putative homeotic labial protein [Daphnia pulex]
Length = 592
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/65 (89%), Positives = 63/65 (96%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NN+GRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 489 NNTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIAAALQLNETQVKIWFQNRRMKQKKRM 548
Query: 195 KEGIL 199
KEG++
Sbjct: 549 KEGLI 553
>gi|194742056|ref|XP_001953523.1| GF17803 [Drosophila ananassae]
gi|190626560|gb|EDV42084.1| GF17803 [Drosophila ananassae]
Length = 610
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/65 (90%), Positives = 63/65 (96%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR
Sbjct: 484 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRQ 543
Query: 195 KEGIL 199
KEG++
Sbjct: 544 KEGLI 548
>gi|167234833|ref|NP_001107762.1| labial [Tribolium castaneum]
gi|15450328|gb|AAK96034.1| homeodomain transcription factor Labial [Tribolium castaneum]
Length = 353
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 78/96 (81%), Gaps = 9/96 (9%)
Query: 113 TTPLTALKYPPPAALS-----QHQSLLN----NSGRTNFTNKQLTELEKEFHFNKYLTRA 163
T+ +AL+ P PA+ S S+L+ N+GRTNFTNKQLTELEKEFHFNKYLTRA
Sbjct: 222 TSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNKYLTRA 281
Query: 164 RRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
RRIEIAS LQLNETQVKIWFQNRRMKQKKR+KEG++
Sbjct: 282 RRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLI 317
>gi|270002810|gb|EEZ99257.1| labial [Tribolium castaneum]
Length = 354
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 78/96 (81%), Gaps = 9/96 (9%)
Query: 113 TTPLTALKYPPPAALS-----QHQSLLN----NSGRTNFTNKQLTELEKEFHFNKYLTRA 163
T+ +AL+ P PA+ S S+L+ N+GRTNFTNKQLTELEKEFHFNKYLTRA
Sbjct: 223 TSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNKYLTRA 282
Query: 164 RRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
RRIEIAS LQLNETQVKIWFQNRRMKQKKR+KEG++
Sbjct: 283 RRIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLI 318
>gi|195446461|ref|XP_002070791.1| GK10836 [Drosophila willistoni]
gi|194166876|gb|EDW81777.1| GK10836 [Drosophila willistoni]
Length = 668
Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats.
Identities = 59/65 (90%), Positives = 64/65 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 535 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 594
Query: 195 KEGIL 199
KEG++
Sbjct: 595 KEGLI 599
>gi|3445426|emb|CAA07497.1| homeobox protein [Cupiennius salei]
Length = 173
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 63/66 (95%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N SGRTNFT KQLTELEKEFH+NKYLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 67 NGSGRTNFTTKQLTELEKEFHYNKYLTRARRIEIATALQLNETQVKIWFQNRRMKQKKRM 126
Query: 195 KEGILI 200
KEG+L+
Sbjct: 127 KEGLLV 132
>gi|357605492|gb|EHJ64645.1| hypothetical protein KGM_10843 [Danaus plexippus]
Length = 199
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/65 (90%), Positives = 63/65 (96%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKRIKE
Sbjct: 111 TGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRIKE 170
Query: 197 GILIG 201
G+++
Sbjct: 171 GLIVA 175
>gi|151935655|gb|ABS18809.1| Hox1 [Flaccisagitta enflata]
Length = 224
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 63/66 (95%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
+NN+GRTNFT KQLTELEKEFHFNKYLTRARRIEIA LQLNETQVKIWFQNRRMKQKKR
Sbjct: 113 INNTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIAGALQLNETQVKIWFQNRRMKQKKR 172
Query: 194 IKEGIL 199
+KEG++
Sbjct: 173 MKEGLI 178
>gi|78523219|gb|ABB46347.1| labial [Sacculina carcini]
Length = 157
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/66 (89%), Positives = 63/66 (95%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
LNN+GRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR
Sbjct: 43 LNNTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIATALALNETQVKIWFQNRRMKQKKR 102
Query: 194 IKEGIL 199
IKEG++
Sbjct: 103 IKEGLI 108
>gi|198453512|ref|XP_002137686.1| lab, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132389|gb|EDY68244.1| lab, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 691
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 59/65 (90%), Positives = 64/65 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 554 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 613
Query: 195 KEGIL 199
KEG++
Sbjct: 614 KEGLI 618
>gi|5916188|gb|AAD55932.1|AF163856_1 homeoprotein CH-Hox1 [Chaetopterus variopedatus]
Length = 302
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 68/80 (85%), Gaps = 4/80 (5%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 216 NLGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKRMK 275
Query: 196 EGILIGVGEGSLMGAQGSSP 215
EG ++ G S QG+SP
Sbjct: 276 EGGVVVSGTDS----QGTSP 291
>gi|46277831|gb|AAK77946.2| homeodomain transcription factor labial [Drosophila virilis]
Length = 563
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 60/63 (95%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQK
Sbjct: 501 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 560
Query: 192 KRI 194
KR+
Sbjct: 561 KRV 563
>gi|170030886|ref|XP_001843318.1| homeobox protein [Culex quinquefasciatus]
gi|167868798|gb|EDS32181.1| homeobox protein [Culex quinquefasciatus]
Length = 160
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/74 (83%), Positives = 68/74 (91%), Gaps = 4/74 (5%)
Query: 130 HQS--LLNN--SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
HQ+ L+ N +GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQVKIWFQN
Sbjct: 48 HQTSFLMTNVSTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANTLQLNETQVKIWFQN 107
Query: 186 RRMKQKKRIKEGIL 199
RRMKQKKRIKEG++
Sbjct: 108 RRMKQKKRIKEGLV 121
>gi|26006977|sp|P10105.2|LAB_DROME RecName: Full=Homeotic protein labial; AltName: Full=F24; AltName:
Full=F90-2
Length = 635
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 511 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 570
Query: 199 L 199
+
Sbjct: 571 I 571
>gi|6015508|emb|CAB57786.1| labial protein [Drosophila melanogaster]
Length = 635
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 511 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 570
Query: 199 L 199
+
Sbjct: 571 I 571
>gi|17136284|ref|NP_476613.1| labial, isoform A [Drosophila melanogaster]
gi|4389441|gb|AAD19811.1| homeodomain protein [Drosophila melanogaster]
gi|7298892|gb|AAF54098.1| labial, isoform A [Drosophila melanogaster]
gi|20152115|gb|AAM11417.1| RE63854p [Drosophila melanogaster]
gi|220942552|gb|ACL83819.1| lab-PA [synthetic construct]
gi|220960292|gb|ACL92682.1| lab-PA [synthetic construct]
Length = 629
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 564
Query: 199 L 199
+
Sbjct: 565 I 565
>gi|48476647|gb|AAT44526.1| labial, partial [Oncopeltus fasciatus]
Length = 92
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/62 (95%), Positives = 61/62 (98%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRRMKQKKR+KEG
Sbjct: 1 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRMKEG 60
Query: 198 IL 199
+L
Sbjct: 61 LL 62
>gi|6015509|emb|CAB57787.1| labial protein [Drosophila melanogaster]
Length = 629
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 564
Query: 199 L 199
+
Sbjct: 565 I 565
>gi|194899107|ref|XP_001979104.1| GG10324 [Drosophila erecta]
gi|190650807|gb|EDV48062.1| GG10324 [Drosophila erecta]
Length = 632
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 508 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 567
Query: 199 L 199
+
Sbjct: 568 I 568
>gi|363730018|ref|XP_003640745.1| PREDICTED: homeobox protein Hox-A1 [Gallus gallus]
Length = 320
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 87/155 (56%), Gaps = 26/155 (16%)
Query: 71 SLSSLRDLFPVKGEIGVTKVQIPSELS------PLGVHPHPTSP------------STDY 112
SLSS P +G G +PS PLG + H SP S D
Sbjct: 124 SLSSAAAQHPHQGYAGGPAQYVPSPYGQEQQSLPLGTYNHALSPLHAGHQDNSRSPSADT 183
Query: 113 TTPLTALKY------PPPAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYLTRAR 164
+ P + PP + + N+ RTNFT KQLTELEKEFHFNKYLTRAR
Sbjct: 184 SPPAQTFDWMKVKRNPPKTGKAGEYGFVGQPNTVRTNFTTKQLTELEKEFHFNKYLTRAR 243
Query: 165 RIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
R+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 244 RVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 278
>gi|829180|emb|CAA31495.1| F24 protein (long form) (AA 141-629) [Drosophila melanogaster]
Length = 495
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 371 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 430
Query: 199 L 199
+
Sbjct: 431 I 431
>gi|241756344|ref|XP_002406420.1| homeobox protein, putative [Ixodes scapularis]
gi|215506157|gb|EEC15651.1| homeobox protein, putative [Ixodes scapularis]
Length = 137
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N +GRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 44 NGTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIATALQLNETQVKIWFQNRRMKQKKRM 103
Query: 195 KEGILIGVGEGSLMGA-QGSSP 215
KEG++ E S GA G+SP
Sbjct: 104 KEGLI--PPESSSDGAPPGASP 123
>gi|255755637|dbj|BAH96544.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 329
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 67/78 (85%), Gaps = 1/78 (1%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFTNKQLTELEKEFHFNKYLTRARR+EIA++L LNETQVKIWFQNRRMKQKKR K
Sbjct: 243 NNGRTNFTNKQLTELEKEFHFNKYLTRARRVEIAAMLGLNETQVKIWFQNRRMKQKKRYK 302
Query: 196 EGILIGVGEGSLMGAQGS 213
E G G S++G + S
Sbjct: 303 EPTF-GQGITSMLGGKNS 319
>gi|270341325|gb|AAS07616.2| labial homeodomain protein 3 [Perionyx excavatus]
Length = 144
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
Query: 122 PPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
PP HQS N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKI
Sbjct: 40 PPDYGYMGHQS---NLGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKI 96
Query: 182 WFQNRRMKQKKRIKEGILIGVGEGS 206
WFQNRRMKQKKR+KE +G GS
Sbjct: 97 WFQNRRMKQKKRVKEN-QVGSATGS 120
>gi|47229434|emb|CAF99422.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 213 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 272
Query: 196 EGIL 199
EGIL
Sbjct: 273 EGIL 276
>gi|38016601|gb|AAR07634.1| transcription factor Hox1 [Ptychodera flava]
Length = 334
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 67/78 (85%), Gaps = 1/78 (1%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFTNKQLTELEKEFHFNKYLTRARR+EIA++L LNETQVKIWFQNRRMKQKKR K
Sbjct: 248 NNGRTNFTNKQLTELEKEFHFNKYLTRARRVEIAAMLGLNETQVKIWFQNRRMKQKKRYK 307
Query: 196 EGILIGVGEGSLMGAQGS 213
E G G S++G + +
Sbjct: 308 EPAF-GQGINSMIGGKNA 324
>gi|332692481|gb|AEE90162.1| Homeobox A1b [Anguilla anguilla]
Length = 323
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 77/116 (66%), Gaps = 10/116 (8%)
Query: 94 SELSPLGVHPHPT--SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
S LSPL V H T SP + T+P + PP + N RTNF+
Sbjct: 163 SHLSPLHVTTHDTCCSPLPESTSPAQTFDWMKVKRNPPKTGKAGEYGFAGQPNMVRTNFS 222
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 223 TKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLL 278
>gi|385654472|gb|AFI61974.1| Hox-A1b [Anguilla japonica]
Length = 323
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 77/116 (66%), Gaps = 10/116 (8%)
Query: 94 SELSPLGVHPHPT--SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
S LSPL V H T SP + T+P + PP + N RTNF+
Sbjct: 163 SHLSPLHVTTHDTCCSPLPESTSPAQTFDWMKVKRNPPKTGKAGEYGFAGQPNMVRTNFS 222
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 223 TKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLL 278
>gi|157109067|ref|XP_001650511.1| homeobox protein [Aedes aegypti]
gi|108879163|gb|EAT43388.1| AAEL005195-PA [Aedes aegypti]
Length = 159
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 62/64 (96%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
++GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKRIK
Sbjct: 58 STGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANSLHLNETQVKIWFQNRRMKQKKRIK 117
Query: 196 EGIL 199
EG++
Sbjct: 118 EGLV 121
>gi|195344035|ref|XP_002038596.1| GM10536 [Drosophila sechellia]
gi|194133617|gb|EDW55133.1| GM10536 [Drosophila sechellia]
Length = 304
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 176 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 235
Query: 199 L 199
+
Sbjct: 236 I 236
>gi|195568783|ref|XP_002102393.1| GD19533 [Drosophila simulans]
gi|194198320|gb|EDX11896.1| GD19533 [Drosophila simulans]
Length = 189
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 61 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 120
Query: 199 L 199
+
Sbjct: 121 I 121
>gi|2495318|sp|Q08821.1|HXA1_XENLA RecName: Full=Homeobox protein Hox-A1; AltName: Full=Hox.lab2
gi|396601|emb|CAA43981.1| Xhox.lab2 [Xenopus laevis]
gi|413874|gb|AAA03479.1| homeobox protein, partial [Xenopus laevis]
Length = 240
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 135 NTARTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 194
Query: 196 EGIL 199
EG+L
Sbjct: 195 EGLL 198
>gi|157628|gb|AAA28610.1| polypeptide containing F90-2 homeo box, partial [Drosophila
melanogaster]
Length = 68
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/61 (93%), Positives = 60/61 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 8 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 67
Query: 195 K 195
K
Sbjct: 68 K 68
>gi|56118550|ref|NP_001008017.1| homeobox A1 [Xenopus (Silurana) tropicalis]
gi|51895944|gb|AAH80895.1| homeobox A1 [Xenopus (Silurana) tropicalis]
Length = 323
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 218 NTARTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 277
Query: 196 EGIL 199
EG+L
Sbjct: 278 EGLL 281
>gi|37693029|gb|AAQ98853.1| homeodomain transcription factor labial [Drosophila virilis]
Length = 181
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 122 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 181
>gi|37693035|gb|AAQ98854.1| homeodomain transcription factor labial [Drosophila buzzatii]
Length = 183
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 124 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 183
>gi|154183826|gb|ABS70766.1| Hoxa1a [Haplochromis burtoni]
Length = 325
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 215 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 274
Query: 196 EGIL 199
EG+L
Sbjct: 275 EGLL 278
>gi|15054408|gb|AAK77944.1| labial [Drosophila hydei]
Length = 144
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 85 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 144
>gi|327280452|ref|XP_003224966.1| PREDICTED: homeobox protein Hox-A1-like [Anolis carolinensis]
Length = 331
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 226 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 285
Query: 196 EGIL 199
EG+L
Sbjct: 286 EGLL 289
>gi|284005051|ref|NP_001164868.1| homeobox protein Hox-A1 [Oryctolagus cuniculus]
gi|217418304|gb|ACK44306.1| homeobox A1 isoform a (predicted) [Oryctolagus cuniculus]
Length = 337
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
NS RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 232 NSVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 291
Query: 196 EGIL 199
EG+L
Sbjct: 292 EGLL 295
>gi|405109796|emb|CCH51000.1| labial, partial [Phalangium opilio]
Length = 181
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/63 (90%), Positives = 61/63 (96%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
SGRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KE
Sbjct: 79 SGRTNFTTKQLTELEKEFHFNKYLTRARRIEIATALQLNETQVKIWFQNRRMKQKKRMKE 138
Query: 197 GIL 199
G++
Sbjct: 139 GLI 141
>gi|354472309|ref|XP_003498382.1| PREDICTED: homeobox protein Hox-D1-like, partial [Cricetulus
griseus]
Length = 140
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 84/127 (66%), Gaps = 11/127 (8%)
Query: 103 PHPTSPSTDYTTPLTALKY-------PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEF 154
P P SP++ + ++ P + LS++ + +S RTNF+ KQLTELEKEF
Sbjct: 1 PTPASPTSGLPAAFSTFEWMKVKRNAPRKSKLSEYGAASPSSAIRTNFSTKQLTELEKEF 60
Query: 155 HFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL---IGVGEGSLMGAQ 211
HFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+L V L ++
Sbjct: 61 HFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGLLATAASVASLQLPRSE 120
Query: 212 GSSPNGG 218
S PN G
Sbjct: 121 TSPPNSG 127
>gi|348522799|ref|XP_003448911.1| PREDICTED: homeobox protein Hox-A1a-like [Oreochromis niloticus]
Length = 299
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 189 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 248
Query: 196 EGIL 199
EG+L
Sbjct: 249 EGLL 252
>gi|119370769|sp|Q1KL10.1|HXA1A_FUGRU RecName: Full=Homeobox protein Hox-A1a
gi|94482764|gb|ABF22384.1| homeobox protein HoxA1a [Takifugu rubripes]
Length = 325
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 213 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 272
Query: 196 EGIL 199
EG+L
Sbjct: 273 EGLL 276
>gi|255742480|gb|ACU32592.1| homeobox protein HoxD1 [Callorhinchus milii]
Length = 315
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 67/79 (84%), Gaps = 3/79 (3%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR +EG+
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEIANALQLNETQVKIWFQNRRMKQKKREREGV 271
Query: 199 LIGVGEGSLMGAQGSSPNG 217
L + SL +Q SP+G
Sbjct: 272 LASL--ASLSCSQD-SPSG 287
>gi|391340968|ref|XP_003744805.1| PREDICTED: uncharacterized protein LOC100898565 [Metaseiulus
occidentalis]
Length = 428
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 66/75 (88%), Gaps = 1/75 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT KQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRM+QKKR+KEG+
Sbjct: 312 RTNFTTKQLTELEKEFHFNKYLTRARRIEIATALTLNETQVKIWFQNRRMRQKKRMKEGL 371
Query: 199 LIGVGEGSL-MGAQG 212
+ G+ +L +G QG
Sbjct: 372 IQPGGQQALGLGQQG 386
>gi|3005950|emb|CAA76295.1| homeodomain protein [Lineus sanguineus]
Length = 118
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 62/64 (96%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 12 NTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKRMK 71
Query: 196 EGIL 199
EG++
Sbjct: 72 EGLV 75
>gi|148231432|ref|NP_001084035.1| homeobox protein Hox-D1 [Xenopus laevis]
gi|214247|gb|AAA49745.1| homeobox gene; putative [Xenopus laevis]
Length = 322
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 7/111 (6%)
Query: 96 LSPL-GVHPHPTSPSTD-YTTPLTALKY---PPPAALSQHQSLLNNSG--RTNFTNKQLT 148
+SPL G +P P SP++D Y + +K PP ++ + + RTNFT KQLT
Sbjct: 155 ISPLPGTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLT 214
Query: 149 ELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
ELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG L
Sbjct: 215 ELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGTL 265
>gi|15054412|gb|AAK77942.1| labial [Drosophila repleta]
Length = 144
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 85 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 144
>gi|28629657|gb|AAO43034.1| HoxC1 [Latimeria menadoensis]
Length = 110
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/65 (84%), Positives = 60/65 (92%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
+ RTNFT KQLTELEKEFHFNKYLTRARR+EIAS LQLNETQVKIWFQNRRMKQKKR +E
Sbjct: 12 TARTNFTTKQLTELEKEFHFNKYLTRARRVEIASALQLNETQVKIWFQNRRMKQKKRERE 71
Query: 197 GILIG 201
G+ +G
Sbjct: 72 GLAVG 76
>gi|15054406|gb|AAK77943.1| labial [Drosophila mercatorum]
Length = 144
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 85 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 144
>gi|410911096|ref|XP_003969026.1| PREDICTED: homeobox protein Hox-A1a-like [Takifugu rubripes]
Length = 293
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 181 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 240
Query: 196 EGIL 199
EG+L
Sbjct: 241 EGLL 244
>gi|386765232|ref|NP_001246953.1| labial, isoform B [Drosophila melanogaster]
gi|383292533|gb|AFH06272.1| labial, isoform B [Drosophila melanogaster]
Length = 213
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 60/61 (98%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG+
Sbjct: 89 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGL 148
Query: 199 L 199
+
Sbjct: 149 I 149
>gi|62547254|gb|AAX86470.1| labial [Drosophila repleta]
Length = 132
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 73 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 132
>gi|311272696|ref|XP_001925052.2| PREDICTED: homeobox protein Hox-D1-like [Sus scrofa]
Length = 327
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 84/129 (65%), Gaps = 12/129 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ LG +P SP++ + ++ P + L+++ +
Sbjct: 169 PADGHSGAFQTASPA----LGAYPTSASPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGA 224
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 225 ASPPSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 284
Query: 192 KRIKEGILI 200
KR +EG+L+
Sbjct: 285 KREREGLLL 293
>gi|432881689|ref|XP_004073903.1| PREDICTED: homeobox protein Hox-A1a-like [Oryzias latipes]
gi|74267501|dbj|BAE44249.1| hoxA1a [Oryzias latipes]
gi|83016933|dbj|BAE53465.1| hoxA1a [Oryzias latipes]
Length = 323
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 214 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 273
Query: 196 EGIL 199
EG++
Sbjct: 274 EGLM 277
>gi|443689501|gb|ELT91875.1| hypothetical protein CAPTEDRAFT_219807 [Capitella teleta]
Length = 305
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/61 (91%), Positives = 58/61 (95%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 221 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQVKIWFQNRRMKQKKRLK 280
Query: 196 E 196
E
Sbjct: 281 E 281
>gi|165873655|gb|ABY67952.1| labial hox protein [Capitella teleta]
Length = 296
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/61 (91%), Positives = 58/61 (95%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 212 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQVKIWFQNRRMKQKKRLK 271
Query: 196 E 196
E
Sbjct: 272 E 272
>gi|160420265|ref|NP_001079188.1| homeobox A1 [Xenopus laevis]
gi|27924329|gb|AAH44984.1| Hoxa1-A protein [Xenopus laevis]
Length = 324
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 59/64 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 219 NTARTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 278
Query: 196 EGIL 199
EG L
Sbjct: 279 EGHL 282
>gi|354479667|ref|XP_003502031.1| PREDICTED: homeobox protein Hox-A1-like [Cricetulus griseus]
gi|344252745|gb|EGW08849.1| Homeobox protein Hox-A1 [Cricetulus griseus]
Length = 334
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 288
Query: 196 EGIL 199
EG+L
Sbjct: 289 EGLL 292
>gi|395540366|ref|XP_003772126.1| PREDICTED: homeobox protein Hox-A1 [Sarcophilus harrisii]
Length = 333
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 227 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 286
Query: 196 EGIL 199
EG+L
Sbjct: 287 EGLL 290
>gi|440899272|gb|ELR50601.1| Homeobox protein Hox-A1 [Bos grunniens mutus]
Length = 333
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|329663517|ref|NP_001193040.1| homeobox protein Hox-A1 [Bos taurus]
gi|296488419|tpg|DAA30532.1| TPA: homeobox A1-like [Bos taurus]
Length = 333
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|123204391|gb|ABM73542.1| homeodomain protein [Megalobrama amblycephala]
Length = 310
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 226 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 285
Query: 196 EGIL 199
EG+L
Sbjct: 286 EGLL 289
>gi|351709860|gb|EHB12779.1| Homeobox protein Hox-D1, partial [Heterocephalus glaber]
Length = 244
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G +P +SP++ + ++ P + L+++ +
Sbjct: 86 PADGHPGAFQTASPAP----GAYPKSSSPTSGLPAAFSTFEWMKVKRNAPKKSKLAEYGA 141
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 142 ASPPSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQK 201
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 202 KREREGLL 209
>gi|220898199|gb|ACL81453.1| HoxC1 [Latimeria menadoensis]
Length = 302
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/65 (84%), Positives = 60/65 (92%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
+ RTNFT KQLTELEKEFHFNKYLTRARR+EIAS LQLNETQVKIWFQNRRMKQKKR +E
Sbjct: 204 TARTNFTTKQLTELEKEFHFNKYLTRARRVEIASALQLNETQVKIWFQNRRMKQKKRERE 263
Query: 197 GILIG 201
G+ +G
Sbjct: 264 GLAVG 268
>gi|395830935|ref|XP_003788568.1| PREDICTED: homeobox protein Hox-A1 [Otolemur garnettii]
gi|202070723|gb|ACH95311.1| homeobox A1 isoform a (predicted) [Otolemur garnettii]
Length = 335
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|297465042|ref|XP_002703633.1| PREDICTED: homeobox protein Hox-D1 [Bos taurus]
Length = 322
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ GV+P SP++ + ++ P + +++ +
Sbjct: 164 PTDGHSGAFQTASPAP----GVYPKCASPASGLPAAFSTFEWMKVKRNAPKKSKFAEYGA 219
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 220 ATPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 279
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 280 KREREGLL 287
>gi|351704291|gb|EHB07210.1| Homeobox protein Hox-A1 [Heterocephalus glaber]
Length = 333
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|311275750|ref|XP_003134892.1| PREDICTED: homeobox protein Hox-A1-like [Sus scrofa]
Length = 336
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 231 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 290
Query: 196 EGIL 199
EG+L
Sbjct: 291 EGLL 294
>gi|184185532|gb|ACC68933.1| homeobox A1 isoform a (predicted) [Rhinolophus ferrumequinum]
Length = 334
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 288
Query: 196 EGIL 199
EG+L
Sbjct: 289 EGLL 292
>gi|359754083|gb|AEV59506.1| HOXA1 [Macropus eugenii]
Length = 337
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 231 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 290
Query: 196 EGIL 199
EG+L
Sbjct: 291 EGLL 294
>gi|444713452|gb|ELW54351.1| Homeobox protein Hox-A1 [Tupaia chinensis]
Length = 344
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 239 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 298
Query: 196 EGIL 199
EG+L
Sbjct: 299 EGLL 302
>gi|431894937|gb|ELK04730.1| Homeobox protein Hox-D1 [Pteropus alecto]
Length = 320
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 90/146 (61%), Gaps = 13/146 (8%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G +P +SP++ + ++ P + L+++ +
Sbjct: 163 PADGPPGAFQTASPAP----GAYPKSSSPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGA 218
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 219 ASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 278
Query: 192 KRIKEGILIGVGEGSL-MGAQGSSPN 216
KR +EG+L SL + G SP
Sbjct: 279 KREREGLLPSTPVASLQLTPSGMSPT 304
>gi|297471590|ref|XP_002685353.1| PREDICTED: homeobox protein Hox-D1 [Bos taurus]
gi|296490674|tpg|DAA32787.1| TPA: homeobox D1-like [Bos taurus]
Length = 322
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ GV+P SP++ + ++ P + +++ +
Sbjct: 164 PTDGHSGAFQTASPAP----GVYPKCASPASGLPAAFSTFEWMKVKRNAPKKSKFAEYGA 219
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 220 ATPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 279
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 280 KREREGLL 287
>gi|73976148|ref|XP_539484.2| PREDICTED: homeobox protein Hox-A1 isoform 1 [Canis lupus
familiaris]
Length = 333
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|149706057|ref|XP_001499346.1| PREDICTED: homeobox protein Hox-A1-like [Equus caballus]
Length = 336
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 231 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 290
Query: 196 EGIL 199
EG+L
Sbjct: 291 EGLL 294
>gi|326921909|ref|XP_003207196.1| PREDICTED: homeobox protein Hox-A1-like [Meleagris gallopavo]
Length = 212
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 77/114 (67%), Gaps = 10/114 (8%)
Query: 96 LSPL--GVHPHPTSPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFTNK 145
LSPL G + SPS D + P + PP + + N+ RTNFT K
Sbjct: 57 LSPLHAGHQDNSRSPSADTSPPAQTFDWMKVKRNPPKTGKAGEYGFVGQPNTVRTNFTTK 116
Query: 146 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
QLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 117 QLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 170
>gi|397472871|ref|XP_003807957.1| PREDICTED: homeobox protein Hox-A1 [Pan paniscus]
Length = 336
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 231 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 290
Query: 196 EGIL 199
EG+L
Sbjct: 291 EGLL 294
>gi|326454540|gb|ADZ74205.1| homeodomain protein HoxA1a [Squaliobarbus curriculus]
Length = 286
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 266
Query: 196 EGIL 199
EG+L
Sbjct: 267 EGLL 270
>gi|326454536|gb|ADZ74203.1| homeodomain protein HoxA1a [Hypophthalmichthys molitrix]
Length = 286
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 266
Query: 196 EGIL 199
EG+L
Sbjct: 267 EGLL 270
>gi|390466612|ref|XP_002807080.2| PREDICTED: homeobox protein Hox-A1 [Callithrix jacchus]
gi|167427224|gb|ABZ80205.1| homeobox A1 isoform a (predicted) [Callithrix jacchus]
Length = 326
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 288
Query: 196 EGIL 199
EG+L
Sbjct: 289 EGLL 292
>gi|410952516|ref|XP_003982925.1| PREDICTED: homeobox protein Hox-A1 [Felis catus]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|403287987|ref|XP_003935199.1| PREDICTED: homeobox protein Hox-A1 [Saimiri boliviensis
boliviensis]
Length = 333
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|400180330|gb|AFP73298.1| Hoxa1alpha [Polyodon spathula]
Length = 315
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 211 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 270
Query: 196 EGIL 199
EG++
Sbjct: 271 EGLI 274
>gi|55628252|ref|XP_519009.1| PREDICTED: homeobox protein Hox-A1 [Pan troglodytes]
gi|410222852|gb|JAA08645.1| homeobox A1 [Pan troglodytes]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|1051228|gb|AAC50249.1| 36 kDa homeodomain-containing protein encoded by the middle size
HOXA1 transcript [Homo sapiens]
gi|8176754|gb|AAB35423.2| HOXA1 [Homo sapiens]
Length = 330
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 225 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 284
Query: 196 EGIL 199
EG+L
Sbjct: 285 EGLL 288
>gi|281182377|ref|NP_001162534.1| homeobox protein Hox-A1 [Papio anubis]
gi|160904215|gb|ABX52199.1| homeobox A1, isoform 1 (predicted) [Papio anubis]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|426355736|ref|XP_004045264.1| PREDICTED: homeobox protein Hox-A1 [Gorilla gorilla gorilla]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|170649674|gb|ACB21259.1| homeobox A1 isoform a (predicted) [Callicebus moloch]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|392356107|ref|XP_003752224.1| PREDICTED: homeobox protein Hox-A1-like [Rattus norvegicus]
gi|149033367|gb|EDL88168.1| homeo box A1 [Rattus norvegicus]
Length = 334
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 288
Query: 196 EGIL 199
EG+L
Sbjct: 289 EGLL 292
>gi|126341827|ref|XP_001363080.1| PREDICTED: homeobox protein Hox-A1-like [Monodelphis domestica]
Length = 337
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 231 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 290
Query: 196 EGIL 199
EG+L
Sbjct: 291 EGLL 294
>gi|387625231|gb|AFJ94202.1| Hox1a homeobox protein [Pristina longiseta]
Length = 232
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 92 NGGRTNFTNKQLTELEKEFHFNRYLTRARRIEIAASLGLNETQVKIWFQNRRMKQKKRLK 151
Query: 196 EG-ILIGVGEGS 206
E L G G+
Sbjct: 152 ENKTLYGSSSGA 163
>gi|41350071|gb|AAS00374.1| unknown [Homo sapiens]
gi|189069262|dbj|BAG36294.1| unnamed protein product [Homo sapiens]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|5031761|ref|NP_005513.1| homeobox protein Hox-A1 isoform a [Homo sapiens]
gi|6166216|sp|P49639.2|HXA1_HUMAN RecName: Full=Homeobox protein Hox-A1; AltName: Full=Homeobox
protein Hox-1F
gi|500757|gb|AAA86954.1| HOX A1 homeodomain protein [Homo sapiens]
gi|21595839|gb|AAH32547.1| Homeobox A1 [Homo sapiens]
gi|51094984|gb|EAL24228.1| homeo box A1 [Homo sapiens]
gi|61364253|gb|AAX42514.1| homeobox A1 [synthetic construct]
gi|61364262|gb|AAX42515.1| homeobox A1 [synthetic construct]
gi|119614267|gb|EAW93861.1| homeobox A1, isoform CRA_a [Homo sapiens]
gi|123979962|gb|ABM81810.1| homeobox A1 [synthetic construct]
gi|123994725|gb|ABM84964.1| homeobox A1 [synthetic construct]
gi|208968487|dbj|BAG74082.1| homeobox A1 [synthetic construct]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|223459868|gb|AAI38099.1| Homeo box A1 [Mus musculus]
Length = 337
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 232 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 291
Query: 196 EGIL 199
EG+L
Sbjct: 292 EGLL 295
>gi|160358776|ref|NP_034579.3| homeobox protein Hox-A1 [Mus musculus]
gi|148666231|gb|EDK98647.1| homeobox A1 [Mus musculus]
gi|223460258|gb|AAI38098.1| Homeo box A1 [Mus musculus]
Length = 336
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 231 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 290
Query: 196 EGIL 199
EG+L
Sbjct: 291 EGLL 294
>gi|61364267|gb|AAX42516.1| homeobox A1 [synthetic construct]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|348564396|ref|XP_003467991.1| PREDICTED: homeobox protein Hox-A1-like [Cavia porcellus]
Length = 333
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|60654527|gb|AAX29954.1| homeobox A1 [synthetic construct]
Length = 336
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|355747758|gb|EHH52255.1| Homeobox protein Hox-1F [Macaca fascicularis]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|109067091|ref|XP_001093148.1| PREDICTED: homeobox protein Hox-A1-like [Macaca mulatta]
gi|355560741|gb|EHH17427.1| Homeobox protein Hox-1F [Macaca mulatta]
Length = 335
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 289
Query: 196 EGIL 199
EG+L
Sbjct: 290 EGLL 293
>gi|395738643|ref|XP_002818169.2| PREDICTED: homeobox protein Hox-A1 [Pongo abelii]
Length = 263
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 158 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 217
Query: 196 EGIL 199
EG+L
Sbjct: 218 EGLL 221
>gi|301754125|ref|XP_002912903.1| PREDICTED: homeobox protein Hox-A1-like [Ailuropoda melanoleuca]
gi|281349544|gb|EFB25128.1| hypothetical protein PANDA_000664 [Ailuropoda melanoleuca]
Length = 332
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 227 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 286
Query: 196 EGIL 199
EG+L
Sbjct: 287 EGLL 290
>gi|123353|sp|P09022.2|HXA1_MOUSE RecName: Full=Homeobox protein Hox-A1; AltName: Full=Early retinoic
acid 1; AltName: Full=Homeobox protein Hox-1.6; AltName:
Full=Homeoboxless protein ERA-1-399; AltName:
Full=Homeotic protein ERA-1-993
gi|309218|gb|AAA37559.1| ERA-1-993 protein [Mus musculus]
Length = 331
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 226 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 285
Query: 196 EGIL 199
EG+L
Sbjct: 286 EGLL 289
>gi|259013352|ref|NP_001158384.1| homeobox 1 [Saccoglossus kowalevskii]
gi|32307799|gb|AAP79296.1| hox1 [Saccoglossus kowalevskii]
Length = 320
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/61 (88%), Positives = 59/61 (96%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
+GRTNFTNKQLTELEKEFHFNKYLTRARR+EIA++L LNETQVKIWFQNRRMKQKKR K+
Sbjct: 234 NGRTNFTNKQLTELEKEFHFNKYLTRARRVEIAAMLGLNETQVKIWFQNRRMKQKKRFKD 293
Query: 197 G 197
G
Sbjct: 294 G 294
>gi|449268329|gb|EMC79198.1| Homeobox protein Hox-A1, partial [Columba livia]
Length = 250
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 145 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 204
Query: 196 EGIL 199
EG+L
Sbjct: 205 EGLL 208
>gi|344270558|ref|XP_003407111.1| PREDICTED: homeobox protein Hox-A1-like [Loxodonta africana]
Length = 333
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|444723477|gb|ELW64132.1| Homeobox protein Hox-D1 [Tupaia chinensis]
Length = 201
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 100/170 (58%), Gaps = 19/170 (11%)
Query: 59 DVKTIGIFFCVFSLS--SLRDLFPV-KGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTP 115
DV + FC +L+ FP+ G+ T P G +P SP++
Sbjct: 21 DVLSFAPKFCRADARPVALQPAFPLGSGDGAFTTSPAP------GAYPKSVSPASGLPAA 74
Query: 116 LTALKY-------PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIE 167
+ ++ P + L+++ S +S RTNF+ KQLTELEKEFHFNKYLTRARRIE
Sbjct: 75 FSTFEWMKVKRNAPKKSKLTEYGSASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIE 134
Query: 168 IASVLQLNETQVKIWFQNRRMKQKKRIKEGIL-IGVGEGSL-MGAQGSSP 215
IA+ LQLN+TQVKIWFQNRRMKQKKR +EG+L G SL + G+SP
Sbjct: 135 IANCLQLNDTQVKIWFQNRRMKQKKREREGLLATGNTMASLQLPLSGTSP 184
>gi|440892328|gb|ELR45561.1| Homeobox protein Hox-D1, partial [Bos grunniens mutus]
Length = 240
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ GV+P SP++ + ++ P + +++ +
Sbjct: 82 PTDGHSGAFQTASPAP----GVYPKCASPASGLPAAFSTFEWMKVKRNAPKKSKFAEYGA 137
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 138 ATPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 197
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 198 KREREGLL 205
>gi|255742439|gb|ACU32554.1| homeobox protein HoxA1 [Callorhinchus milii]
Length = 326
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 221 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 280
Query: 196 EGIL 199
EG++
Sbjct: 281 EGLI 284
>gi|112983632|ref|NP_034597.2| homeobox protein Hox-D1 [Mus musculus]
gi|111306630|gb|AAI20538.1| Homeo box D1 [Mus musculus]
gi|111306633|gb|AAI20540.1| Homeo box D1 [Mus musculus]
gi|148695234|gb|EDL27181.1| homeobox D1 [Mus musculus]
Length = 328
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G P P SP++ + ++ P + LS++ +
Sbjct: 170 PADGHPGPFQTVSPAP----GACPKPASPTSSLPAAHSTFEWMKVKRNAPKKSKLSEYGA 225
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 226 TSPPSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQK 285
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 286 KREREGLL 293
>gi|212276503|sp|Q08820.3|HXD1_XENLA RecName: Full=Homeobox protein Hox-D1; AltName: Full=Hox.lab1;
AltName: Full=Labial protein; Short=Xlab
gi|76780340|gb|AAI06403.1| HoxD1 protein [Xenopus laevis]
Length = 300
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 76/106 (71%), Gaps = 6/106 (5%)
Query: 100 GVHPHPTSPSTD-YTTPLTALKY---PPPAALSQHQSLLNNSG--RTNFTNKQLTELEKE 153
G +P P SP++D Y + +K PP ++ + + RTNFT KQLTELEKE
Sbjct: 159 GTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLTELEKE 218
Query: 154 FHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
FHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG L
Sbjct: 219 FHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGTL 264
>gi|232263|sp|Q01822.1|HXD1_MOUSE RecName: Full=Homeobox protein Hox-D1; AltName: Full=Homeobox
protein Hox-4.9
gi|51426|emb|CAA42637.1| Hox-4.9 [Mus musculus]
Length = 327
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G P P SP++ + ++ P + LS++ +
Sbjct: 169 PADGHPGPFQTVSPAP----GACPKPASPTSSLPAAHSTFEWMKVKRNAPKKSKLSEYGA 224
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 225 TSPPSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQK 284
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 285 KREREGLL 292
>gi|220898173|gb|ACL81429.1| HoxA1 [Latimeria menadoensis]
Length = 327
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 223 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 282
Query: 196 EGIL 199
EG++
Sbjct: 283 EGLI 286
>gi|413876|gb|AAA03480.1| homeobox protein [Xenopus laevis]
Length = 300
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 76/106 (71%), Gaps = 6/106 (5%)
Query: 100 GVHPHPTSPSTD-YTTPLTALKY---PPPAALSQHQSLLNNSG--RTNFTNKQLTELEKE 153
G +P P SP++D Y + +K PP ++ + + RTNFT KQLTELEKE
Sbjct: 159 GTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLTELEKE 218
Query: 154 FHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
FHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG L
Sbjct: 219 FHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGTL 264
>gi|270341324|gb|AAS07615.2| labial homeodomain protein 2 [Perionyx excavatus]
Length = 342
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/68 (86%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
Query: 129 QHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRM 188
QH S N GRTNFTNKQLTELEKEFHFN+YLTRARRIEIAS L LNETQVKIWFQNRRM
Sbjct: 182 QHHSTPN-LGRTNFTNKQLTELEKEFHFNRYLTRARRIEIASSLGLNETQVKIWFQNRRM 240
Query: 189 KQKKRIKE 196
KQKKR+KE
Sbjct: 241 KQKKRMKE 248
>gi|345323628|ref|XP_001510442.2| PREDICTED: homeobox protein Hox-A1-like [Ornithorhynchus anatinus]
Length = 202
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 97 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 156
Query: 196 EGIL 199
EG+L
Sbjct: 157 EGLL 160
>gi|326454546|gb|ADZ74208.1| homeodomain protein HoxA1a [Ochetobius elongatus]
Length = 286
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQ+KR K
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQRKREK 266
Query: 196 EGIL 199
EG+L
Sbjct: 267 EGLL 270
>gi|9652091|gb|AAF91398.1|AF269153_1 labial homeotic protein [Anopheles gambiae]
Length = 109
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/72 (81%), Positives = 65/72 (90%), Gaps = 4/72 (5%)
Query: 124 PAALSQHQS--LLNN--SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
P+A+S HQS ++NN +GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQV
Sbjct: 38 PSAVSPHQSSFMINNNSTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANALHLNETQV 97
Query: 180 KIWFQNRRMKQK 191
KIWFQNRRMKQK
Sbjct: 98 KIWFQNRRMKQK 109
>gi|213514772|ref|NP_001133035.1| homeobox protein HoxA1aa [Salmo salar]
gi|157816051|gb|ABV82044.1| homeobox protein HoxA1aa [Salmo salar]
gi|158702230|gb|ABW77446.1| homeobox protein HoxA1aa [Salmo salar]
Length = 328
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/65 (84%), Positives = 60/65 (92%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR
Sbjct: 217 SNTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKRE 276
Query: 195 KEGIL 199
KE +L
Sbjct: 277 KECLL 281
>gi|226822845|gb|ACO83080.1| homeobox A1 isoform a (predicted) [Dasypus novemcinctus]
Length = 336
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+
Sbjct: 234 RTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGL 293
Query: 199 L 199
L
Sbjct: 294 L 294
>gi|385654508|gb|AFI62005.1| Hox-C1a [Anguilla japonica]
Length = 342
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
Query: 134 LNNSG---RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQ 190
++N+G RTNFT KQLTELEKEFHFNKYLTRARR+EIAS +QLNETQVKIWFQNRRMKQ
Sbjct: 218 VHNTGGAPRTNFTTKQLTELEKEFHFNKYLTRARRVEIASAMQLNETQVKIWFQNRRMKQ 277
Query: 191 KKRIKEGILIGVGEGSLMGAQGS 213
KKR KEG+ + S G + S
Sbjct: 278 KKREKEGLALAPPASSGSGPEDS 300
>gi|157786814|ref|NP_001099354.1| homeobox protein Hox-D1 [Rattus norvegicus]
gi|149022297|gb|EDL79191.1| homeo box D1 (predicted) [Rattus norvegicus]
Length = 328
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 87/142 (61%), Gaps = 12/142 (8%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G P P SP++ + ++ P + LS++ +
Sbjct: 170 PADGHPGPFQTVSPAP----GACPKPASPTSGLPAAHSTFEWMKVKRNAPKKSKLSEYGA 225
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 226 TSPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRMEIANCLQLNDTQVKIWFQNRRMKQK 285
Query: 192 KRIKEGILIGVGEGSLMGAQGS 213
KR +EG+L + + GS
Sbjct: 286 KREREGLLATAASVASLQLPGS 307
>gi|327275879|ref|XP_003222699.1| PREDICTED: homeobox protein Hox-B1-like [Anolis carolinensis]
Length = 348
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR KEG+
Sbjct: 252 RTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREKEGL 311
Query: 199 LIG 201
L G
Sbjct: 312 LAG 314
>gi|14916591|sp|Q9IA19.1|HXA1_HETFR RecName: Full=Homeobox protein Hox-A1
gi|7271828|gb|AAF44639.1|AF224262_1 HoxA1 [Heterodontus francisci]
Length = 326
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 222 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 281
Query: 196 EGI 198
EG+
Sbjct: 282 EGL 284
>gi|88604702|gb|ABD46722.1| homeobox protein labial [Endeis spinosa]
Length = 271
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 58/64 (90%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
LNN+GRT F KQLTELEKEFHFNKYLTRAR IEIAS L LNETQVKIWFQNRRMKQKKR
Sbjct: 199 LNNTGRTAFNTKQLTELEKEFHFNKYLTRARXIEIASALSLNETQVKIWFQNRRMKQKKR 258
Query: 194 IKEG 197
+KEG
Sbjct: 259 MKEG 262
>gi|326454544|gb|ADZ74207.1| homeodomain protein HoxA1a [Opsariichthys bidens]
Length = 286
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQK+R K
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKEREK 266
Query: 196 EGIL 199
EG+L
Sbjct: 267 EGLL 270
>gi|396599|emb|CAA43980.1| Xhox.lab1 [Xenopus laevis]
Length = 272
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 76/106 (71%), Gaps = 6/106 (5%)
Query: 100 GVHPHPTSPSTD-YTTPLTALKY---PPPAALSQHQSLLNNSG--RTNFTNKQLTELEKE 153
G +P P SP++D Y + +K PP ++ + + RTNFT KQLTELEKE
Sbjct: 85 GTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLTELEKE 144
Query: 154 FHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
FHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG L
Sbjct: 145 FHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGTL 190
>gi|410969020|ref|XP_003990996.1| PREDICTED: homeobox protein Hox-D1 [Felis catus]
Length = 213
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G +P SP++ + ++ P + L+++ +
Sbjct: 55 PADGHPGTFQTASPAP----GAYPKSASPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGA 110
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 111 ASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 170
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 171 KREREGLL 178
>gi|344268816|ref|XP_003406252.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1-like
[Loxodonta africana]
Length = 329
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 81/128 (63%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G +P SP++ + ++ P + L + +
Sbjct: 171 PADGHAGAFQTASPAP----GAYPKSASPASGLAAAFSTFEWMKVKRNAPKKSKLPEFGA 226
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 227 ASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 286
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 287 KREREGLL 294
>gi|2765089|emb|CAA71835.1| Lox7 [Helobdella triserialis]
Length = 164
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/60 (91%), Positives = 56/60 (93%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS L LNETQVKIWFQNRRMK KKR+KE
Sbjct: 44 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASTLGLNETQVKIWFQNRRMKHKKRLKES 103
>gi|326454532|gb|ADZ74201.1| homeodomain protein HoxA1a [Mylopharyngodon piceus]
Length = 286
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 59/64 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 266
Query: 196 EGIL 199
EG L
Sbjct: 267 EGSL 270
>gi|254212181|gb|ACT65756.1| Hoxa1 [Leucoraja erinacea]
Length = 325
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 221 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 280
Query: 196 EGI 198
EG+
Sbjct: 281 EGL 283
>gi|63103214|gb|AAD46166.2|AF151663_1 labial homeobox protein [Alitta virens]
Length = 97
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 64/78 (82%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 13 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKRMK 72
Query: 196 EGILIGVGEGSLMGAQGS 213
E + GS ++ S
Sbjct: 73 ETNVSPTTNGSTENSEHS 90
>gi|312144882|gb|ADQ28184.1| homeobox A1 [Hipposideros armiger]
Length = 187
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 92 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 151
Query: 196 EGIL 199
EG+L
Sbjct: 152 EGLL 155
>gi|431909010|gb|ELK12601.1| Homeobox protein Hox-A1 [Pteropus alecto]
Length = 333
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RT+FT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 228 NAVRTSFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|301128905|emb|CBL59367.1| HoxD1 [Scyliorhinus canicula]
Length = 309
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 61/68 (89%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
++ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQL+ETQVKIWFQNRRMKQKKR +
Sbjct: 201 STARTNFTTKQLTELEKEFHFNKYLTRARRVEIANALQLSETQVKIWFQNRRMKQKKRER 260
Query: 196 EGILIGVG 203
EG+L +
Sbjct: 261 EGLLASLA 268
>gi|301617253|ref|XP_002938063.1| PREDICTED: homeobox protein Hox-B1-like [Xenopus (Silurana)
tropicalis]
Length = 303
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 64/76 (84%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQK
Sbjct: 206 STQQNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQK 265
Query: 192 KRIKEGILIGVGEGSL 207
KR +EG+ +GS+
Sbjct: 266 KREREGLAPSAIKGSM 281
>gi|403259136|ref|XP_003922086.1| PREDICTED: homeobox protein Hox-D1 [Saimiri boliviensis
boliviensis]
Length = 280
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G +P SP++ + ++ P + L+++ +
Sbjct: 122 PADGHPGAFQTASPAP----GAYPKSVSPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGA 177
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 178 ASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQK 237
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 238 KREREGLL 245
>gi|27528342|emb|CAD43607.1| homeobox protein [Platynereis dumerilii]
Length = 152
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 64/78 (82%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 68 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKRMK 127
Query: 196 EGILIGVGEGSLMGAQGS 213
E + GS ++ S
Sbjct: 128 ETNVSPTTNGSTENSEHS 145
>gi|62859877|ref|NP_001016678.1| homeobox protein Hox-D1 [Xenopus (Silurana) tropicalis]
gi|123907399|sp|Q28IU6.1|HXD1_XENTR RecName: Full=Homeobox protein Hox-D1
gi|89268715|emb|CAJ83247.1| homeo box D1 [Xenopus (Silurana) tropicalis]
gi|169642308|gb|AAI60395.1| homeobox D1 [Xenopus (Silurana) tropicalis]
gi|213627234|gb|AAI70961.1| homeobox D1 [Xenopus (Silurana) tropicalis]
gi|213627236|gb|AAI70965.1| homeobox D1 [Xenopus (Silurana) tropicalis]
Length = 301
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 77/106 (72%), Gaps = 6/106 (5%)
Query: 100 GVHPHPTSPSTD-YTTPLTALKY---PPPAALSQHQSLLN--NSGRTNFTNKQLTELEKE 153
G +P P SP++D + + +K PP +L + + + RTNFT KQLTELEKE
Sbjct: 162 GTYPKPASPASDTHVSTFDWMKVKRNPPKKSLQSEYGVASPPCTVRTNFTTKQLTELEKE 221
Query: 154 FHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
FHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG L
Sbjct: 222 FHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGSL 267
>gi|326454538|gb|ADZ74204.1| homeodomain protein HoxA1a [Hypophthalmichthys nobilis]
Length = 286
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNET VKIWFQNRRMKQKKR K
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETHVKIWFQNRRMKQKKREK 266
Query: 196 EGIL 199
EG+L
Sbjct: 267 EGLL 270
>gi|449493066|ref|XP_002192523.2| PREDICTED: homeobox protein Hox-A1 [Taeniopygia guttata]
Length = 162
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 57 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 116
Query: 196 EGIL 199
EG+L
Sbjct: 117 EGLL 120
>gi|28629621|gb|AAO43016.1| HoxA1 [Latimeria menadoensis]
Length = 116
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 12 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 71
Query: 196 EGIL 199
EG++
Sbjct: 72 EGLI 75
>gi|387598530|gb|AFJ91921.1| homeodomain transcription factor 1 [Platynereis dumerilii]
Length = 152
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 64/78 (82%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 68 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKRMK 127
Query: 196 EGILIGVGEGSLMGAQGS 213
E + GS ++ S
Sbjct: 128 ETNVSPTTNGSTENSEHS 145
>gi|26350639|dbj|BAC38956.1| unnamed protein product [Mus musculus]
Length = 336
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNF KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 231 NAVRTNFNTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 290
Query: 196 EGIL 199
EG+L
Sbjct: 291 EGLL 294
>gi|296204450|ref|XP_002749394.1| PREDICTED: homeobox protein Hox-D1 [Callithrix jacchus]
Length = 328
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G +P SP + + ++ P + L+++ +
Sbjct: 170 PADGHPGTFQTASPAP----GAYPKSVSPVSGLPAAFSTFEWMKVKRNAPKKSKLAEYGA 225
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 226 ASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQK 285
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 286 KREREGLL 293
>gi|4322055|gb|AAD15937.1| homeobox protein [Danio rerio]
Length = 315
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 212 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 271
Query: 196 EGIL 199
EG+L
Sbjct: 272 EGLL 275
>gi|193083003|ref|NP_001122333.1| homeobox transcription factor Hox1 [Ciona intestinalis]
gi|70569882|dbj|BAE06495.1| transcription factor protein [Ciona intestinalis]
Length = 365
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 58/62 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 235 NNGRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALRLNETQVKIWFQNRRMKQKKRDK 294
Query: 196 EG 197
E
Sbjct: 295 EA 296
>gi|332692464|gb|AEE90147.1| Homeobox A1a [Anguilla anguilla]
Length = 319
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR++IA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 211 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVQIAAALRLNETQVKIWFQNRRMKQKKREK 270
Query: 196 EGIL 199
+G+L
Sbjct: 271 DGLL 274
>gi|385654464|gb|AFI61967.1| Hox-A1a [Anguilla japonica]
Length = 319
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR++IA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 211 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVQIAAALRLNETQVKIWFQNRRMKQKKREK 270
Query: 196 EGIL 199
+G+L
Sbjct: 271 DGLL 274
>gi|222876506|gb|ACM69150.1| Hox1 protein [Symsagittifera roscoffensis]
Length = 420
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQVKIWFQNRRMKQKK +KEG
Sbjct: 358 GRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQVKIWFQNRRMKQKKLLKEG 417
Query: 198 IL 199
L
Sbjct: 418 KL 419
>gi|348585599|ref|XP_003478559.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1-like [Cavia
porcellus]
Length = 468
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 58/64 (90%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 373 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGL 432
Query: 199 LIGV 202
L
Sbjct: 433 LAAA 436
>gi|359754116|gb|AEV59536.1| HOXD1 [Macropus eugenii]
Length = 334
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 78/108 (72%), Gaps = 8/108 (7%)
Query: 100 GVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQSLLNNSG-RTNFTNKQLTELE 151
G +P SP++ T L+ ++ P + LS++ ++S RTNF+ KQLTELE
Sbjct: 192 GSYPKSVSPASGLPTALSTFEWMKVKRNAPKKSKLSEYGVHSSSSTIRTNFSTKQLTELE 251
Query: 152 KEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KEFHFNKYLTRARRIEIA LQLN+TQVKIWFQNRRMKQKKR +EG+L
Sbjct: 252 KEFHFNKYLTRARRIEIAHSLQLNDTQVKIWFQNRRMKQKKREREGLL 299
>gi|291391794|ref|XP_002712254.1| PREDICTED: homeobox D3 [Oryctolagus cuniculus]
Length = 2096
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 58/64 (90%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 2008 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGL 2067
Query: 199 LIGV 202
L
Sbjct: 2068 LAAA 2071
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 958 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 1017
Query: 198 IL 199
IL
Sbjct: 1018 IL 1019
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KI
Sbjct: 140 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKI 182
>gi|332692515|gb|AEE90192.1| Homeobox C1a [Anguilla anguilla]
Length = 342
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 66/83 (79%), Gaps = 3/83 (3%)
Query: 134 LNNSG---RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQ 190
++N+G RTNFT KQLTELEKEFHFNKYLTRARR+EIA +QLNETQVKIWFQNRRMKQ
Sbjct: 218 VHNTGGAPRTNFTTKQLTELEKEFHFNKYLTRARRVEIACAMQLNETQVKIWFQNRRMKQ 277
Query: 191 KKRIKEGILIGVGEGSLMGAQGS 213
KKR KEG+ + S G + S
Sbjct: 278 KKREKEGLALAPPASSGSGPEDS 300
>gi|301128879|emb|CBL59343.1| HoxA1 [Scyliorhinus canicula]
Length = 322
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EI++ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 220 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEISAALQLNETQVKIWFQNRRMKQKKREK 279
Query: 196 EGI 198
EG+
Sbjct: 280 EGL 282
>gi|18858823|ref|NP_571611.1| homeobox protein Hox-A1a [Danio rerio]
gi|60392416|sp|Q98SI1.1|HXA1A_DANRE RecName: Full=Homeobox protein Hox-A1a; Short=Hox-A1
gi|13397813|emb|CAC34565.1| Hoxa1a protein [Danio rerio]
gi|23503780|emb|CAD52136.1| SI:dZ227P06.2.1 (homeo box A1a) [Danio rerio]
gi|190337000|gb|AAI62701.1| Hoxa1a protein [Danio rerio]
Length = 329
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 226 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 285
Query: 196 EGIL 199
EG+L
Sbjct: 286 EGLL 289
>gi|363743436|ref|XP_003642841.1| PREDICTED: homeobox protein Hox-B1 [Gallus gallus]
Length = 310
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Query: 122 PPPAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
PP A LL N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQV
Sbjct: 199 PPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 258
Query: 180 KIWFQNRRMKQKKRIKEGI 198
KIWFQNRRMKQKKR KEG+
Sbjct: 259 KIWFQNRRMKQKKREKEGL 277
>gi|385654484|gb|AFI61985.1| Hox-B1a [Anguilla japonica]
Length = 316
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 61/71 (85%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 221 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 280
Query: 196 EGILIGVGEGS 206
EG+ V S
Sbjct: 281 EGLAPSVNRAS 291
>gi|251857547|gb|ACT22569.1| anterior Hox1 [Convolutriloba retrogemma]
Length = 302
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQVKIWFQNRRMKQKK +KEG
Sbjct: 240 GRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQVKIWFQNRRMKQKKLLKEG 299
Query: 198 IL 199
L
Sbjct: 300 KL 301
>gi|399997|sp|P31259.1|HXB1_CHICK RecName: Full=Homeobox protein Hox-B1; AltName: Full=Ghox-lab
gi|833615|emb|CAA48418.1| Ghox-lab [Gallus gallus]
Length = 309
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 214 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 273
Query: 196 EGI 198
EG+
Sbjct: 274 EGL 276
>gi|332692493|gb|AEE90173.1| Homeobox B1a [Anguilla anguilla]
Length = 316
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 61/71 (85%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 221 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 280
Query: 196 EGILIGVGEGS 206
EG+ V S
Sbjct: 281 EGLAPSVNRAS 291
>gi|395837292|ref|XP_003791572.1| PREDICTED: homeobox protein Hox-D1 [Otolemur garnettii]
Length = 325
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 11/127 (8%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G +P SP++ + ++ P + L +
Sbjct: 168 PADGRPGAFQTASPAP----GAYPKSVSPASGLPAAFSTFEWMKVKRNAPKKSKLEYGVT 223
Query: 133 LLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
+++ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLN+TQVKIWFQNRRMKQKK
Sbjct: 224 SPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRMEIANCLQLNDTQVKIWFQNRRMKQKK 283
Query: 193 RIKEGIL 199
R +EG+L
Sbjct: 284 REREGLL 290
>gi|400180343|gb|AFP73310.1| Hoxa1beta [Polyodon spathula]
Length = 317
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 59/64 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 212 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 271
Query: 196 EGIL 199
G++
Sbjct: 272 GGLI 275
>gi|441652002|ref|XP_004091028.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A1 [Nomascus
leucogenys]
Length = 336
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 58/64 (90%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N RTNFT KQLTELEKEFHFNKY TRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 231 NGVRTNFTTKQLTELEKEFHFNKYXTRARRVEIAAXLQLNETQVKIWFQNRRMKQKKREK 290
Query: 196 EGIL 199
EG+L
Sbjct: 291 EGLL 294
>gi|23503781|emb|CAD52137.1| SI:dZ227P06.2.2 (homeo box A1a) [Danio rerio]
Length = 294
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 191 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 250
Query: 196 EGIL 199
EG+L
Sbjct: 251 EGLL 254
>gi|213512563|ref|NP_001133049.1| homeobox protein HoxB1aa [Salmo salar]
gi|157816097|gb|ABV82067.1| homeobox protein HoxB1aa [Salmo salar]
gi|158702272|gb|ABW77471.1| homeobox protein HoxB1aa [Salmo salar]
Length = 311
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 61/71 (85%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 217 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 276
Query: 196 EGILIGVGEGS 206
EG+ GS
Sbjct: 277 EGLASASSTGS 287
>gi|13397815|emb|CAC34566.1| Hoxa1a protein [Danio rerio]
Length = 294
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 191 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 250
Query: 196 EGIL 199
EG+L
Sbjct: 251 EGLL 254
>gi|123204438|gb|ABM73554.1| homeodomain protein [Megalobrama amblycephala]
Length = 299
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/65 (83%), Positives = 60/65 (92%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
L N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 204 LQNTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKR 263
Query: 194 IKEGI 198
KEG+
Sbjct: 264 EKEGL 268
>gi|217035824|gb|ACJ74382.1| Hox1 [Branchiostoma lanceolatum]
Length = 288
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 59/70 (84%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQVKIWFQNRRMKQKKR K
Sbjct: 206 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQVKIWFQNRRMKQKKREK 265
Query: 196 EGILIGVGEG 205
E G G
Sbjct: 266 ENGFSTPGSG 275
>gi|260835445|ref|XP_002612719.1| hypothetical protein BRAFLDRAFT_116926 [Branchiostoma floridae]
gi|83423508|dbj|BAA78620.2| AmphiHox1 [Branchiostoma floridae]
gi|229298098|gb|EEN68728.1| hypothetical protein BRAFLDRAFT_116926 [Branchiostoma floridae]
Length = 288
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 59/70 (84%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQVKIWFQNRRMKQKKR K
Sbjct: 206 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQVKIWFQNRRMKQKKREK 265
Query: 196 EGILIGVGEG 205
E G G
Sbjct: 266 ENGFSTPGSG 275
>gi|359323891|ref|XP_852467.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1, partial
[Canis lupus familiaris]
Length = 251
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 156 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGL 215
Query: 199 L 199
L
Sbjct: 216 L 216
>gi|326454548|gb|ADZ74209.1| homeodomain protein HoxA1a [Luciobrama macrocephalus]
Length = 287
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/65 (87%), Positives = 60/65 (92%), Gaps = 1/65 (1%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIE-IASVLQLNETQVKIWFQNRRMKQKKRI 194
N+ RTNFT KQLTELEKEFHFNKYLTRARR+E IA+ LQLNETQVKIWFQNRRMKQKKR
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEHIAAALQLNETQVKIWFQNRRMKQKKRE 266
Query: 195 KEGIL 199
KEGIL
Sbjct: 267 KEGIL 271
>gi|326935934|ref|XP_003214019.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B1-like
[Meleagris gallopavo]
Length = 309
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 214 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 273
Query: 196 EGI 198
EG+
Sbjct: 274 EGL 276
>gi|402888726|ref|XP_003907702.1| PREDICTED: homeobox protein Hox-D1 [Papio anubis]
Length = 328
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGL 292
Query: 199 L 199
L
Sbjct: 293 L 293
>gi|449277041|gb|EMC85348.1| Homeobox protein Hox-B1, partial [Columba livia]
Length = 166
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 71/99 (71%), Gaps = 5/99 (5%)
Query: 105 PTSPSTDYTTPLTALKY---PPPAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKY 159
P+ P + T +K PP A LL N+ RTNFT KQLTELEKEFHFNKY
Sbjct: 35 PSEPGPNATQTFDWMKVKRNPPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKY 94
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
LTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR KEG+
Sbjct: 95 LTRARRVEIAATLELNETQVKIWFQNRRMKQKKREKEGL 133
>gi|387230959|gb|AFJ72190.1| homeobox A1, partial [Chaerephon plicatus]
Length = 116
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 11 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 70
Query: 196 EGIL 199
EG+L
Sbjct: 71 EGLL 74
>gi|426220823|ref|XP_004004611.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1 [Ovis
aries]
Length = 276
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 181 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGL 240
Query: 199 L 199
L
Sbjct: 241 L 241
>gi|297264383|ref|XP_001095080.2| PREDICTED: hypothetical protein LOC701064 [Macaca mulatta]
Length = 3029
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 2934 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGL 2993
Query: 199 L 199
L
Sbjct: 2994 L 2994
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 2129 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 2188
Query: 198 IL 199
IL
Sbjct: 2189 IL 2190
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 1276 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 1329
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 40/55 (72%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
GR ++ Q ELEKEF FN YLTR RRIE++ L L E QVKIWFQNRRMK KK
Sbjct: 541 GRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 595
>gi|88604704|gb|ABD46723.1| homeobox protein labial [Nymphon gracile]
Length = 364
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/66 (84%), Positives = 59/66 (89%)
Query: 131 QSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQ 190
QSL NN+GRT F KQLTELEKE H+NKYLTRARRIEIAS L LNETQVKIWFQNRRMKQ
Sbjct: 284 QSLNNNTGRTAFNTKQLTELEKEXHYNKYLTRARRIEIASALSLNETQVKIWFQNRRMKQ 343
Query: 191 KKRIKE 196
KKR+KE
Sbjct: 344 KKRMKE 349
>gi|397911054|gb|AFO68803.1| homeodomain-containing protein Hox1, partial [Branchiostoma
lanceolatum]
Length = 275
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 59/70 (84%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQVKIWFQNRRMKQKKR K
Sbjct: 199 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQVKIWFQNRRMKQKKREK 258
Query: 196 EGILIGVGEG 205
E G G
Sbjct: 259 ENGFSTPGSG 268
>gi|387202|gb|AAA37839.1| Hox1.6 protein [Mus musculus]
Length = 128
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 23 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 82
Query: 196 EGIL 199
EG+L
Sbjct: 83 EGLL 86
>gi|27525469|emb|CAD59667.1| putative homeobox protein hox1 [Ciona intestinalis]
Length = 129
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/68 (80%), Positives = 60/68 (88%)
Query: 130 HQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMK 189
H + N+GRTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMK
Sbjct: 12 HYGVTGNNGRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALRLNETQVKIWFQNRRMK 71
Query: 190 QKKRIKEG 197
QKKR KE
Sbjct: 72 QKKRDKEA 79
>gi|332209409|ref|XP_003253804.1| PREDICTED: homeobox protein Hox-D1 [Nomascus leucogenys]
Length = 328
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGL 292
Query: 199 L 199
L
Sbjct: 293 L 293
>gi|224813654|gb|ACN65056.1| homeo box B1b [Megalobrama amblycephala]
Length = 306
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 64/78 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR KEG
Sbjct: 211 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEGT 270
Query: 199 LIGVGEGSLMGAQGSSPN 216
+ +L ++ S+ N
Sbjct: 271 APIIKRANLCSSRQSADN 288
>gi|387230961|gb|AFJ72191.1| homeobox A1, partial [Aselliscus stoliczkanus]
Length = 110
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 5 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 64
Query: 196 EGIL 199
EG+L
Sbjct: 65 EGLL 68
>gi|262263020|gb|ACY39980.1| HoxD1 [Heterodontus francisci]
Length = 309
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 60/68 (88%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
++ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQL+ETQVKIWFQNRRMKQKKR +
Sbjct: 201 STARTNFTTKQLTELEKEFHFNKYLTRARRVEIANALQLSETQVKIWFQNRRMKQKKRER 260
Query: 196 EGILIGVG 203
+G L +
Sbjct: 261 DGFLANLA 268
>gi|148537257|dbj|BAF63519.1| LjHox1w homeobox [Lethenteron camtschaticum]
Length = 409
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG
Sbjct: 298 RTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEG 356
>gi|397911056|gb|AFO68804.1| homeodomain-containing protein Hox1, partial [Branchiostoma
lanceolatum]
Length = 178
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 59/70 (84%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQVKIWFQNRRMKQKKR K
Sbjct: 96 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQVKIWFQNRRMKQKKREK 155
Query: 196 EGILIGVGEG 205
E G G
Sbjct: 156 ENGFSTPGSG 165
>gi|405967557|gb|EKC32705.1| Homeobox protein Hox-A1 [Crassostrea gigas]
Length = 117
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR++
Sbjct: 26 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKRLR 85
Query: 196 EG 197
E
Sbjct: 86 EA 87
>gi|395519831|ref|XP_003764045.1| PREDICTED: homeobox protein Hox-D1 [Sarcophilus harrisii]
Length = 335
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 77/108 (71%), Gaps = 8/108 (7%)
Query: 100 GVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQSLLNNSG-RTNFTNKQLTELE 151
G +P SP++ T L+ ++ P + LS++ +S RTNF+ KQLTELE
Sbjct: 192 GSYPKSVSPASGLPTSLSTFEWMKVKRNAPKKSKLSEYGVHSPSSTIRTNFSTKQLTELE 251
Query: 152 KEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KEFHFNKYLTRARRIEIA LQLN+TQVKIWFQNRRMKQKKR +EG+L
Sbjct: 252 KEFHFNKYLTRARRIEIAHSLQLNDTQVKIWFQNRRMKQKKREREGLL 299
>gi|399996|sp|P31357.1|HXB1_AMBME RecName: Full=Homeobox protein Hox-B1; AltName: Full=AHox1
gi|62414|emb|CAA33599.1| Ahox1 protein product (184 AA) [Ambystoma mexicanum]
Length = 184
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
NS RTNFT KQL+ELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 88 NSIRTNFTTKQLSELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 147
Query: 196 EGI 198
EG+
Sbjct: 148 EGL 150
>gi|255742441|gb|ACU32555.1| homeobox protein HoxB1 [Callorhinchus milii]
Length = 318
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
NS RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +
Sbjct: 208 NSTRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 267
Query: 196 EGI 198
EG
Sbjct: 268 EGF 270
>gi|355564999|gb|EHH21488.1| hypothetical protein EGK_04568, partial [Macaca mulatta]
Length = 214
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 12/128 (9%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ G +P SP++ + ++ + L+Q+ +
Sbjct: 56 PADGHPGAFQTASPAP----GTYPKSVSPASGLPAAFSTFEWMKVKRNASKKSKLAQYGT 111
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 112 ANPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQK 171
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 172 KREREGLL 179
>gi|220898187|gb|ACL81442.1| HoxB1 [Latimeria menadoensis]
Length = 309
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +
Sbjct: 214 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 273
Query: 196 EGI 198
EGI
Sbjct: 274 EGI 276
>gi|326454534|gb|ADZ74202.1| homeodomain protein HoxA1a [Ctenopharyngodon idella]
Length = 286
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 58/64 (90%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREK 266
Query: 196 EGIL 199
E L
Sbjct: 267 EVFL 270
>gi|28629641|gb|AAO43026.1| HoxB1 [Latimeria menadoensis]
Length = 107
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +
Sbjct: 12 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 71
Query: 196 EGI 198
EGI
Sbjct: 72 EGI 74
>gi|387230953|gb|AFJ72187.1| homeobox A1, partial [Hipposideros armiger]
gi|387230955|gb|AFJ72188.1| homeobox A1, partial [Taphozous melanopogon]
Length = 117
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 12 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 71
Query: 196 EGIL 199
EG+L
Sbjct: 72 EGLL 75
>gi|431890737|gb|ELK01616.1| Homeobox protein Hox-B1 [Pteropus alecto]
Length = 304
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 58/62 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 210 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 269
Query: 199 LI 200
L+
Sbjct: 270 LV 271
>gi|281349082|gb|EFB24666.1| hypothetical protein PANDA_019123 [Ailuropoda melanoleuca]
Length = 198
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 103 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGL 162
Query: 199 L 199
L
Sbjct: 163 L 163
>gi|222876500|gb|ACM69147.1| Hox1 protein, partial [Isodiametra pulchra]
Length = 100
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 68/98 (69%), Gaps = 9/98 (9%)
Query: 103 PH-PTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLT 161
PH S S P + YPP + GRTNFTNKQLTELEKEFHFN+YLT
Sbjct: 10 PHLQWSKSATAGLPGSTHAYPPGSQ--------TRGGRTNFTNKQLTELEKEFHFNRYLT 61
Query: 162 RARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
RARRIEIAS L LNETQVKIWFQNRRMKQKK +KEG L
Sbjct: 62 RARRIEIASSLNLNETQVKIWFQNRRMKQKKLVKEGKL 99
>gi|126326650|ref|XP_001376994.1| PREDICTED: homeobox protein Hox-D1-like [Monodelphis domestica]
Length = 324
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 77/108 (71%), Gaps = 8/108 (7%)
Query: 100 GVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQSLLNNSG-RTNFTNKQLTELE 151
G +P SP++ T L+ ++ P + LS++ +S RTNF+ KQLTELE
Sbjct: 181 GSYPKSISPASGLPTALSTFEWMKVKRNAPKKSKLSEYGVHSPSSTIRTNFSTKQLTELE 240
Query: 152 KEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KEFHFNKYLTRARR+EIA LQLN+TQVKIWFQNRRMKQKKR +EG+L
Sbjct: 241 KEFHFNKYLTRARRLEIAHSLQLNDTQVKIWFQNRRMKQKKREREGLL 288
>gi|332692504|gb|AEE90182.1| Homeobox B1b [Anguilla anguilla]
Length = 314
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/65 (81%), Positives = 60/65 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 221 NTIRTNFTTKQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 280
Query: 196 EGILI 200
EG+ +
Sbjct: 281 EGLAL 285
>gi|18150503|gb|AAL61641.1|AF434665_1 Hox1w [Petromyzon marinus]
Length = 404
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG
Sbjct: 302 RTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEG 360
>gi|432925210|ref|XP_004080698.1| PREDICTED: homeobox protein Hox-B1b-like [Oryzias latipes]
gi|74267549|dbj|BAE44273.1| hoxB1b [Oryzias latipes]
gi|83016959|dbj|BAE53484.1| hoxB1b [Oryzias latipes]
Length = 278
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 63/78 (80%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N RTNFT KQLTELEKEFHFNKYLTRARRIE+A+ L LNETQVKIWFQNRRMKQKKR K
Sbjct: 188 NVIRTNFTTKQLTELEKEFHFNKYLTRARRIEVAASLDLNETQVKIWFQNRRMKQKKREK 247
Query: 196 EGILIGVGEGSLMGAQGS 213
G ++G S+ A+ S
Sbjct: 248 LGYVLGNPSASVEKARSS 265
>gi|190337170|gb|AAI62942.1| Hoxb1a protein [Danio rerio]
Length = 316
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 223 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 282
Query: 196 EGI 198
EG+
Sbjct: 283 EGL 285
>gi|385654486|gb|AFI61986.1| Hox-B1b [Anguilla japonica]
Length = 314
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/65 (81%), Positives = 60/65 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 221 NTIRTNFTTKQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 280
Query: 196 EGILI 200
EG+ +
Sbjct: 281 EGLAL 285
>gi|301128891|emb|CBL59354.1| HoxB1 [Scyliorhinus canicula]
Length = 311
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 210 NTMRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 269
Query: 196 EGI 198
EG
Sbjct: 270 EGF 272
>gi|355750649|gb|EHH54976.1| hypothetical protein EGM_04094, partial [Macaca fascicularis]
Length = 166
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 71 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGL 130
Query: 199 L 199
L
Sbjct: 131 L 131
>gi|60392402|sp|O42366.2|HXB1A_DANRE RecName: Full=Homeobox protein Hox-B1a; Short=Hox-B1
gi|26984641|emb|CAD59118.1| SI:dZ254O17.8 (homeo box protein B1a) [Danio rerio]
Length = 311
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 218 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 277
Query: 196 EGI 198
EG+
Sbjct: 278 EGL 280
>gi|258678265|gb|ACV87739.1| anterior class Hox protein [Convolutriloba longifissura]
Length = 166
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQVKIWFQNRRMKQKK +KEG
Sbjct: 104 GRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQVKIWFQNRRMKQKKLLKEG 163
Query: 198 IL 199
L
Sbjct: 164 KL 165
>gi|305379189|gb|ADM48793.1| homeobox transcription factor 1 [Symsagittifera roscoffensis]
Length = 95
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQVKIWFQNRRMKQKK +KEG
Sbjct: 33 GRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQVKIWFQNRRMKQKKLLKEG 92
Query: 198 IL 199
L
Sbjct: 93 KL 94
>gi|224813646|gb|ACN65052.1| homeo box B1a [Megalobrama amblycephala]
Length = 316
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 223 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 282
Query: 196 EGI 198
EG+
Sbjct: 283 EGL 285
>gi|18858829|ref|NP_571190.1| homeobox protein Hox-B1a [Danio rerio]
gi|4322070|gb|AAD15944.1| homeobox protein [Danio rerio]
Length = 318
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 225 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 284
Query: 196 EGI 198
EG+
Sbjct: 285 EGL 287
>gi|220898211|gb|ACL81464.1| HoxD1 [Latimeria menadoensis]
Length = 307
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 4/82 (4%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYL+R RRIEIA+ L LNETQVKIWFQNRRMKQKKR +
Sbjct: 203 NTARTNFTTKQLTELEKEFHFNKYLSRTRRIEIANALHLNETQVKIWFQNRRMKQKKRGQ 262
Query: 196 EGILIGVGEGSLMGAQGSSPNG 217
G+L S + A+ +SP+G
Sbjct: 263 VGLL----STSPVDAEHNSPSG 280
>gi|2495323|sp|Q90346.1|HXB1_CYPCA RecName: Full=Homeobox protein Hox-B1
gi|1483240|emb|CAA62554.1| hoxb-1 [Cyprinus carpio]
Length = 315
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 222 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 281
Query: 196 EGI 198
EG+
Sbjct: 282 EGL 284
>gi|1483239|emb|CAA62553.1| hoxb-1 [Cyprinus carpio]
Length = 310
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 217 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 276
Query: 196 EGI 198
EG+
Sbjct: 277 EGL 279
>gi|15680245|gb|AAH14477.1| Homeobox D1 [Homo sapiens]
gi|123982844|gb|ABM83163.1| homeobox D1 [synthetic construct]
gi|123997523|gb|ABM86363.1| homeobox D1 [synthetic construct]
Length = 328
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKREREGL 292
Query: 199 L 199
L
Sbjct: 293 L 293
>gi|13375632|ref|NP_078777.1| homeobox protein Hox-D1 [Homo sapiens]
gi|17378648|sp|Q9GZZ0.1|HXD1_HUMAN RecName: Full=Homeobox protein Hox-D1; AltName: Full=Homeobox
protein Hox-GG
gi|11095618|gb|AAG29939.1|AF202118_1 HOX D1 protein [Homo sapiens]
gi|12005429|gb|AAG44444.1|AF241528_1 homeobox-containing transcripton factor HOXD1 [Homo sapiens]
gi|119631485|gb|EAX11080.1| homeobox D1 [Homo sapiens]
gi|189054291|dbj|BAG36811.1| unnamed protein product [Homo sapiens]
Length = 328
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKREREGL 292
Query: 199 L 199
L
Sbjct: 293 L 293
>gi|426337805|ref|XP_004032887.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1 [Gorilla
gorilla gorilla]
Length = 328
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKREREGL 292
Query: 199 L 199
L
Sbjct: 293 L 293
>gi|213514770|ref|NP_001133009.1| homeobox protein HoxC1ab [Salmo salar]
gi|157815966|gb|ABV82002.1| homeobox protein HoxC1ab [Salmo salar]
gi|158702339|gb|ABW77529.1| homeobox protein HoxC1ab [Salmo salar]
Length = 327
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 60/70 (85%)
Query: 130 HQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMK 189
H N RT+FT KQLTELEKEFHFNKYLTRARR+EIAS LQL+ETQVKIWFQNRRMK
Sbjct: 231 HHITANGVLRTSFTTKQLTELEKEFHFNKYLTRARRVEIASALQLSETQVKIWFQNRRMK 290
Query: 190 QKKRIKEGIL 199
QKK ++EG+L
Sbjct: 291 QKKLMREGLL 300
>gi|208968515|dbj|BAG74096.1| homeobox D1 [synthetic construct]
Length = 328
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKREREGL 292
Query: 199 L 199
L
Sbjct: 293 L 293
>gi|395732504|ref|XP_003776075.1| PREDICTED: homeobox protein Hox-D1 [Pongo abelii]
Length = 325
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 230 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKREREGL 289
Query: 199 L 199
L
Sbjct: 290 L 290
>gi|125858494|ref|NP_001075041.1| homeobox protein Hox-B1 [Pan troglodytes]
gi|397514554|ref|XP_003827546.1| PREDICTED: homeobox protein Hox-B1 [Pan paniscus]
gi|146324924|sp|A2T6Z0.1|HXB1_PANTR RecName: Full=Homeobox protein Hox-B1
gi|124111133|gb|ABM91945.1| HOXB1 [Pan troglodytes]
Length = 301
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 167 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 226
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 227 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>gi|387230957|gb|AFJ72189.1| homeobox A1, partial [Cynopterus sphinx]
Length = 110
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RT+FT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 5 NAVRTSFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 64
Query: 196 EGIL 199
EG+L
Sbjct: 65 EGLL 68
>gi|193956|gb|AAA37853.1| homeobox protein, partial [Mus musculus]
Length = 110
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 11/81 (13%)
Query: 123 PPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIW 182
PP+A+ RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIW
Sbjct: 10 PPSAI-----------RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIW 58
Query: 183 FQNRRMKQKKRIKEGILIGVG 203
FQNRRMKQKKR +EG+L
Sbjct: 59 FQNRRMKQKKREREGLLATAA 79
>gi|149513620|ref|XP_001516750.1| PREDICTED: homeobox protein Hox-B1-like [Ornithorhynchus anatinus]
Length = 219
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/65 (80%), Positives = 58/65 (89%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 125 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGA 184
Query: 199 LIGVG 203
L G
Sbjct: 185 LARAG 189
>gi|32384|emb|CAA34656.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 167 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 226
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 227 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>gi|149639705|ref|XP_001515180.1| PREDICTED: homeobox protein Hox-D1-like [Ornithorhynchus anatinus]
Length = 263
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 57/64 (89%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG
Sbjct: 168 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGQ 227
Query: 199 LIGV 202
L
Sbjct: 228 LASA 231
>gi|397489150|ref|XP_003815597.1| PREDICTED: homeobox protein Hox-D1, partial [Pan paniscus]
Length = 249
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 154 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKREREGL 213
Query: 199 L 199
L
Sbjct: 214 L 214
>gi|426347604|ref|XP_004041439.1| PREDICTED: homeobox protein Hox-B1 [Gorilla gorilla gorilla]
Length = 304
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 170 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 229
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 230 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 268
>gi|345805490|ref|XP_548172.3| PREDICTED: homeobox protein Hox-B1 [Canis lupus familiaris]
Length = 305
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 211 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 269
>gi|387230965|gb|AFJ72193.1| homeobox A1, partial [Rousettus leschenaultii]
Length = 117
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RT+FT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 12 NAVRTSFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 71
Query: 196 EGIL 199
EG+L
Sbjct: 72 EGLL 75
>gi|119615152|gb|EAW94746.1| homeobox B1 [Homo sapiens]
Length = 304
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 170 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 229
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 230 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 268
>gi|146324923|sp|A1YG01.1|HXB1_PANPA RecName: Full=Homeobox protein Hox-B1
gi|121483859|gb|ABM54226.1| HOXB1 [Pan paniscus]
Length = 301
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 167 PCPSEPNTPTXRTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 226
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 227 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>gi|126308236|ref|XP_001367047.1| PREDICTED: homeobox protein Hox-B1-like [Monodelphis domestica]
Length = 298
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 57/62 (91%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 262
Query: 199 LI 200
L
Sbjct: 263 LT 264
>gi|28629671|gb|AAO43041.1| HoxD1 [Latimeria menadoensis]
Length = 116
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 4/82 (4%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYL+R RRIEIA+ L LNETQVKIWFQNRRMKQKKR +
Sbjct: 12 NTARTNFTTKQLTELEKEFHFNKYLSRTRRIEIANALHLNETQVKIWFQNRRMKQKKRGQ 71
Query: 196 EGILIGVGEGSLMGAQGSSPNG 217
G+L S + A+ +SP+G
Sbjct: 72 VGLL----STSPVDAEHNSPSG 89
>gi|332815255|ref|XP_001144367.2| PREDICTED: homeobox protein Hox-D1 [Pan troglodytes]
Length = 346
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 251 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKREREGL 310
Query: 199 L 199
L
Sbjct: 311 L 311
>gi|359754095|gb|AEV59517.1| HOXB1 [Macropus eugenii]
Length = 298
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 57/62 (91%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 262
Query: 199 LI 200
L
Sbjct: 263 LA 264
>gi|301762924|ref|XP_002916866.1| PREDICTED: homeobox protein Hox-B1-like [Ailuropoda melanoleuca]
gi|281344378|gb|EFB19962.1| hypothetical protein PANDA_005007 [Ailuropoda melanoleuca]
Length = 304
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 210 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 268
>gi|149724534|ref|XP_001499202.1| PREDICTED: homeobox protein Hox-B1-like [Equus caballus]
Length = 301
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 207 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>gi|410980873|ref|XP_003996798.1| PREDICTED: homeobox protein Hox-B1 [Felis catus]
Length = 304
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 210 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 268
>gi|395756652|ref|XP_003780400.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B1 [Pongo
abelii]
Length = 213
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 79 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 138
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 139 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 177
>gi|226693400|ref|NP_032292.3| homeobox protein Hox-B1 [Mus musculus]
gi|123272|sp|P17919.1|HXB1_MOUSE RecName: Full=Homeobox protein Hox-B1; AltName: Full=Homeobox
protein Hox-2.9
gi|297528|emb|CAA37238.1| hox-2.9 [Mus musculus]
gi|73695289|gb|AAI03598.1| Homeo box B1 [Mus musculus]
gi|73695291|gb|AAI03599.1| Homeo box B1 [Mus musculus]
gi|73695454|gb|AAI03607.1| Homeo box B1 [Mus musculus]
gi|148684086|gb|EDL16033.1| homeobox B1 [Mus musculus]
Length = 297
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 58/65 (89%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 262
Query: 199 LIGVG 203
+ G
Sbjct: 263 RMPAG 267
>gi|311267486|ref|XP_003131593.1| PREDICTED: homeobox protein Hox-B1-like [Sus scrofa]
Length = 301
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 207 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>gi|22316137|emb|CAD44460.1| homeo box B1b protein [Danio rerio]
Length = 307
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR KEG
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEG 270
>gi|13397819|emb|CAC34568.1| Hoxb1b protein [Danio rerio]
Length = 307
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR KEG
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEG 270
>gi|146324925|sp|A2T7J2.1|HXB1_PONPY RecName: Full=Homeobox protein Hox-B1
gi|124054159|gb|ABM89270.1| HOXB1 [Pongo pygmaeus]
Length = 301
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 167 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSELGLGSPSGLRTNFTTRQLTELEKEFHFNK 226
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 227 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>gi|1110451|dbj|BAA08728.1| HrHox-1 [Halocynthia roretzi]
Length = 318
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 78/133 (58%), Gaps = 20/133 (15%)
Query: 85 IGVTKVQIPSELSPLGVHPHP---------TSPST--DYTTPLTALKYPPPAA--LSQHQ 131
IG P SPLG+H + TSP+ D T +K PP H
Sbjct: 24 IGYLACGNPQRRSPLGLHSNSGIREKLESGTSPNAEQDNTYDWMKIKRNPPKTNGFYTHG 83
Query: 132 SL-------LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQ 184
+ +GRTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L LNETQVKIWFQ
Sbjct: 84 KMDAYGYAGTAGNGRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALLLNETQVKIWFQ 143
Query: 185 NRRMKQKKRIKEG 197
NRRMKQKKR KE
Sbjct: 144 NRRMKQKKRDKEA 156
>gi|5596508|gb|AAD45587.1|AF144672_1 labial homeodomain protein [Lingula anatina]
Length = 89
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 58/62 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N GRTNF++KQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+K
Sbjct: 17 NMGRTNFSDKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKRMK 76
Query: 196 EG 197
E
Sbjct: 77 ES 78
>gi|145279635|ref|NP_571217.2| homeobox protein Hox-B1b [Danio rerio]
gi|110825726|sp|Q90423.3|HXB1B_DANRE RecName: Full=Homeobox protein Hox-B1b; AltName: Full=Homeobox
protein Hox-A1
gi|126631497|gb|AAI33877.1| Homeo box B1b [Danio rerio]
Length = 307
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR KEG
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEG 270
>gi|403279475|ref|XP_003931275.1| PREDICTED: homeobox protein Hox-B1 [Saimiri boliviensis
boliviensis]
Length = 306
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 212 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 270
>gi|520608|emb|CAA84514.1| Hox-1 homeodomain protein [Branchiostoma floridae]
gi|745774|prf||2016458A Hox-1 gene
Length = 95
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 59/70 (84%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQVKIWFQNRRMKQKKR K
Sbjct: 13 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQVKIWFQNRRMKQKKREK 72
Query: 196 EGILIGVGEG 205
E G G
Sbjct: 73 ENGFSTPGSG 82
>gi|18858843|ref|NP_571606.1| homeobox protein Hox-C1a [Danio rerio]
gi|60392443|sp|Q98SH9.1|HXC1A_DANRE RecName: Full=Homeobox protein Hox-C1a
gi|13397817|emb|CAC34567.1| Hoxc1a protein [Danio rerio]
gi|190336994|gb|AAI62691.1| Homeo box C1a [Danio rerio]
gi|190338675|gb|AAI62694.1| Homeo box C1a [Danio rerio]
Length = 302
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG- 197
RTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQL+ETQVKIWFQNRRMKQKK ++EG
Sbjct: 219 RTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQVKIWFQNRRMKQKKMLREGL 278
Query: 198 -----ILIGVGEGSLMGAQGSSPN 216
++ G E S SSP+
Sbjct: 279 AQGLMLISGCDEDSKKSDTCSSPD 302
>gi|109491748|ref|XP_001081344.1| PREDICTED: homeobox protein Hox-B1 [Rattus norvegicus]
gi|293351798|ref|XP_220896.4| PREDICTED: homeobox protein Hox-B1 [Rattus norvegicus]
gi|149053991|gb|EDM05808.1| homeo box B1 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 297
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 58/65 (89%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 262
Query: 199 LIGVG 203
+ G
Sbjct: 263 RVPAG 267
>gi|402899479|ref|XP_003912723.1| PREDICTED: homeobox protein Hox-B1 [Papio anubis]
Length = 304
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 210 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 268
>gi|124053432|ref|NP_001074229.1| homeobox protein Hox-B1 [Macaca mulatta]
gi|146324920|sp|A2D4R4.1|HXB1_ATEGE RecName: Full=Homeobox protein Hox-B1
gi|146324921|sp|A2D649.1|HXB1_MACMU RecName: Full=Homeobox protein Hox-B1
gi|146324922|sp|A2T6H5.1|HXB1_MACNE RecName: Full=Homeobox protein Hox-B1
gi|121503182|gb|ABM55142.1| HOXB1 [Macaca mulatta]
gi|122053859|gb|ABM65911.1| HOXB1 [Ateles geoffroyi]
gi|124013549|gb|ABM88023.1| HOXB1 [Macaca nemestrina]
Length = 304
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 210 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 268
>gi|348562281|ref|XP_003466939.1| PREDICTED: homeobox protein Hox-B1-like [Cavia porcellus]
Length = 301
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 60/68 (88%), Gaps = 3/68 (4%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE-- 196
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +E
Sbjct: 207 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 266
Query: 197 -GILIGVG 203
G+L+ G
Sbjct: 267 RGVLVPPG 274
>gi|329664272|ref|NP_001192883.1| homeobox protein Hox-B1 [Bos taurus]
gi|296476537|tpg|DAA18652.1| TPA: Homeobox protein Hox-B1-like [Bos taurus]
Length = 302
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 208 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 266
>gi|432107304|gb|ELK32718.1| Homeobox protein Hox-D1 [Myotis davidii]
Length = 114
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 26 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGL 85
Query: 199 L 199
L
Sbjct: 86 L 86
>gi|440910528|gb|ELR60322.1| Homeobox protein Hox-B1 [Bos grunniens mutus]
Length = 302
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 208 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 266
>gi|426237819|ref|XP_004012855.1| PREDICTED: homeobox protein Hox-B1 [Ovis aries]
Length = 302
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 208 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 266
>gi|355568478|gb|EHH24759.1| hypothetical protein EGK_08474 [Macaca mulatta]
Length = 330
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 236 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 294
>gi|444517762|gb|ELV11779.1| Homeobox protein Hox-B1 [Tupaia chinensis]
Length = 298
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 204 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 262
>gi|395532692|ref|XP_003768402.1| PREDICTED: homeobox protein Hox-B1 [Sarcophilus harrisii]
Length = 298
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/61 (83%), Positives = 57/61 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 262
Query: 199 L 199
L
Sbjct: 263 L 263
>gi|296202593|ref|XP_002748522.1| PREDICTED: homeobox protein Hox-B1 [Callithrix jacchus]
Length = 304
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 210 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 268
>gi|256082746|ref|XP_002577614.1| pyruvate kinase [Schistosoma mansoni]
gi|360043170|emb|CCD78582.1| putative pyruvate kinase [Schistosoma mansoni]
Length = 1126
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/74 (74%), Positives = 64/74 (86%), Gaps = 2/74 (2%)
Query: 128 SQHQSLLNNS--GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
S++ + NNS GRTNFT +QLTELEKEFHFN+YL+RARRIEIA+ L L ETQVKIWFQN
Sbjct: 554 SKYDIINNNSLSGRTNFTTRQLTELEKEFHFNRYLSRARRIEIAADLNLTETQVKIWFQN 613
Query: 186 RRMKQKKRIKEGIL 199
RRMKQKKRI++ IL
Sbjct: 614 RRMKQKKRIRDKIL 627
>gi|345327995|ref|XP_003431224.1| PREDICTED: homeobox protein Hox-D1-like [Ornithorhynchus anatinus]
Length = 113
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 57/64 (89%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG
Sbjct: 18 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGQ 77
Query: 199 LIGV 202
L
Sbjct: 78 LASA 81
>gi|172087560|ref|XP_001913322.1| HOX1 [Oikopleura dioica]
gi|42601451|gb|AAS21474.1| HOX1 [Oikopleura dioica]
Length = 247
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 59/72 (81%)
Query: 126 ALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
A S+ N SGRT F+ +QLTELEKEFH+NKYLTRARR+EIAS L LNETQVKIWFQN
Sbjct: 157 AYQAQTSVGNGSGRTTFSTRQLTELEKEFHYNKYLTRARRVEIASNLALNETQVKIWFQN 216
Query: 186 RRMKQKKRIKEG 197
RRMKQKKR KE
Sbjct: 217 RRMKQKKRDKEA 228
>gi|1127810|gb|AAB04107.1| Hoxa-1 [Danio rerio]
Length = 308
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR KEG
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEG 270
>gi|213513696|ref|NP_001133055.1| homeobox protein HoxB1ab [Salmo salar]
gi|157816115|gb|ABV82076.1| homeobox protein HoxB1ab [Salmo salar]
gi|158702284|gb|ABW77482.1| homeobox protien HoxB1ab [Salmo salar]
Length = 313
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 59/70 (84%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR K
Sbjct: 219 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREK 278
Query: 196 EGILIGVGEG 205
E + G
Sbjct: 279 ESLAPASSTG 288
>gi|395826608|ref|XP_003786509.1| PREDICTED: homeobox protein Hox-B1 [Otolemur garnettii]
Length = 301
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 207 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>gi|313228753|emb|CBY17904.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 59/72 (81%)
Query: 126 ALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
A S+ N SGRT F+ +QLTELEKEFH+NKYLTRARR+EIAS L LNETQVKIWFQN
Sbjct: 152 AYQAQTSVGNGSGRTTFSTRQLTELEKEFHYNKYLTRARRVEIASNLALNETQVKIWFQN 211
Query: 186 RRMKQKKRIKEG 197
RRMKQKKR KE
Sbjct: 212 RRMKQKKRDKEA 223
>gi|51434|emb|CAA42078.1| 297 aa protein [Mus musculus]
Length = 297
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 57/65 (87%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAPTLELNETQVKIWFQNRRMKQKKREREGG 262
Query: 199 LIGVG 203
+ G
Sbjct: 263 RMPAG 267
>gi|4322094|gb|AAD15956.1| homeobox protein [Danio rerio]
Length = 84
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG- 197
RTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQL+ETQVKIWFQNRRMKQKK ++EG
Sbjct: 1 RTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQVKIWFQNRRMKQKKMLREGL 60
Query: 198 -----ILIGVGEGSLMGAQGSSPN 216
++ G E S SSP+
Sbjct: 61 AQGLMLISGCDEDSKKSDTCSSPD 84
>gi|38004426|gb|AAR07506.1| labial-like protein [Schistosoma mansoni]
Length = 318
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 62/70 (88%), Gaps = 3/70 (4%)
Query: 133 LLNN---SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMK 189
++NN SGRTNFT +QLTELEKEFHFN+YL+RARRIEIA+ L L ETQVKIWFQNRRMK
Sbjct: 120 IINNNSLSGRTNFTTRQLTELEKEFHFNRYLSRARRIEIAADLNLTETQVKIWFQNRRMK 179
Query: 190 QKKRIKEGIL 199
QKKRI++ IL
Sbjct: 180 QKKRIRDKIL 189
>gi|354474774|ref|XP_003499605.1| PREDICTED: homeobox protein Hox-B1-like [Cricetulus griseus]
gi|344249147|gb|EGW05251.1| Homeobox protein Hox-B1 [Cricetulus griseus]
Length = 297
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 261
>gi|432871992|ref|XP_004072063.1| PREDICTED: homeobox protein Hox-B1a-like [Oryzias latipes]
Length = 362
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 59/63 (93%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N++ RTNFT +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 258 NSAMRTNFTTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 317
Query: 195 KEG 197
+EG
Sbjct: 318 REG 320
>gi|74267531|dbj|BAE44264.1| hoxB1a [Oryzias latipes]
Length = 391
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 59/63 (93%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N++ RTNFT +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 287 NSAMRTNFTTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 346
Query: 195 KEG 197
+EG
Sbjct: 347 REG 349
>gi|83016944|dbj|BAE53471.1| hoxB1a [Oryzias latipes]
Length = 394
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 59/63 (93%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N++ RTNFT +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 290 NSAMRTNFTTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 349
Query: 195 KEG 197
+EG
Sbjct: 350 REG 352
>gi|387232069|gb|AFJ72745.1| homeobox D1, partial [Rousettus leschenaultii]
Length = 73
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 60/69 (86%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 4 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGL 63
Query: 199 LIGVGEGSL 207
L SL
Sbjct: 64 LPSTPVASL 72
>gi|47213842|emb|CAG00646.1| unnamed protein product [Tetraodon nigroviridis]
Length = 284
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR- 193
+N+ RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 195 HNAIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQVKIWFQNRRMKQKKRE 254
Query: 194 -IKEGILIGVGEGSLMGAQGSSP 215
+ G+L G+SP
Sbjct: 255 KLDCGLLHSPAAAEKASGPGNSP 277
>gi|24497526|ref|NP_002135.2| homeobox protein Hox-B1 [Homo sapiens]
gi|251757285|sp|P14653.2|HXB1_HUMAN RecName: Full=Homeobox protein Hox-B1; AltName: Full=Homeobox
protein Hox-2I
Length = 301
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 167 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 226
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +E
Sbjct: 227 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRERE 264
>gi|355753953|gb|EHH57918.1| hypothetical protein EGM_07662 [Macaca fascicularis]
Length = 306
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 212 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 270
>gi|291405877|ref|XP_002719363.1| PREDICTED: Homeobox protein Hox-B1-like [Oryctolagus cuniculus]
Length = 306
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ PST +K PP A L G RTNF+ +QLTELEKEFHFNK
Sbjct: 172 PCPSEPSTPAARTFDWMKVKRNPPKTAKVSELGLGAPGGLRTNFSTRQLTELEKEFHFNK 231
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 232 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 270
>gi|387232065|gb|AFJ72743.1| homeobox D1, partial [Aselliscus stoliczkanus]
Length = 68
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+
Sbjct: 1 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGL 60
Query: 199 L 199
L
Sbjct: 61 L 61
>gi|6981040|ref|NP_037207.1| homeobox protein Hox-A1 [Rattus norvegicus]
gi|6016290|sp|O08656.1|HXA1_RAT RecName: Full=Homeobox protein Hox-A1
gi|1929020|gb|AAB51399.1| homeobox-plus HoxA1 protein [Rattus norvegicus]
Length = 333
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 58/64 (90%), Gaps = 1/64 (1%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT KQLTELEKEFHFNKYLTRAR EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARS-EIAASLQLNETQVKIWFQNRRMKQKKREK 287
Query: 196 EGIL 199
EG+L
Sbjct: 288 EGLL 291
>gi|344285421|ref|XP_003414460.1| PREDICTED: hypothetical protein LOC100674251 [Loxodonta africana]
Length = 230
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 136 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 194
>gi|351713526|gb|EHB16445.1| Homeobox protein Hox-B1 [Heterocephalus glaber]
Length = 301
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/59 (83%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNF+ +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 207 RTNFSTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>gi|4558069|pdb|1B72|A Chain A, Pbx1, Homeobox Protein Hox-B1DNA TERNARY COMPLEX
Length = 97
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRA 163
P +P+ + + PP A L + SG RTNFT +QLTELEKEFHFNKYL+RA
Sbjct: 3 PNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRA 62
Query: 164 RRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 63 RRVEIAATLELNETQVKIWFQNRRMKQKKREREG 96
>gi|32394402|gb|AAN11404.1| labial-like homeobox protein SrHox1 [Symsagittifera roscoffensis]
Length = 68
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 57/62 (91%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQVKIWFQ RRMKQKK +KEG
Sbjct: 6 GRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQVKIWFQTRRMKQKKLLKEG 65
Query: 198 IL 199
L
Sbjct: 66 KL 67
>gi|45772171|tpg|DAA05215.1| TPA_exp: Hoxb1a [Takifugu rubripes]
Length = 388
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 59/63 (93%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N++ RTNF+ +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 283 NSAIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 342
Query: 195 KEG 197
+EG
Sbjct: 343 REG 345
>gi|387231259|gb|AFJ72340.1| homeobox B1, partial [Cynopterus sphinx]
Length = 108
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 58/62 (93%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 14 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 73
Query: 199 LI 200
L+
Sbjct: 74 LV 75
>gi|410901721|ref|XP_003964344.1| PREDICTED: homeobox protein Hox-B1a-like [Takifugu rubripes]
gi|119370782|sp|Q1KKX5.1|HXB1A_FUGRU RecName: Full=Homeobox protein Hox-B1a
gi|94482801|gb|ABF22419.1| homeobox protein HoxB1a [Takifugu rubripes]
Length = 391
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 59/63 (93%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N++ RTNF+ +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 286 NSAIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 345
Query: 195 KEG 197
+EG
Sbjct: 346 REG 348
>gi|2130554|gb|AAC60204.1| homeobox protein HOXB-1 [Takifugu rubripes]
Length = 391
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 59/63 (93%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N++ RTNF+ +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 286 NSAIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 345
Query: 195 KEG 197
+EG
Sbjct: 346 REG 348
>gi|385341|gb|AAB25675.1| Xhox2.9 product {homeodomain} [Xenopus laevis, embryo, Peptide
Partial, 66 aa]
Length = 66
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 58/63 (92%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +
Sbjct: 2 NIIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 61
Query: 196 EGI 198
EG+
Sbjct: 62 EGL 64
>gi|12857052|dbj|BAB30874.1| unnamed protein product [Mus musculus]
Length = 297
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 57/65 (87%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RTNFT +QLTELEK FHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 203 RTNFTTRQLTELEKGFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 262
Query: 199 LIGVG 203
+ G
Sbjct: 263 RMPAG 267
>gi|110555639|emb|CAJ56091.1| labial protein [Glomeris marginata]
Length = 73
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 59/71 (83%)
Query: 145 KQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGE 204
KQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG++I +
Sbjct: 2 KQLTELEKEFHFNKYLTRARRIEIATALQLNETQVKIWFQNRRMKQKKRMKEGLVIVKEQ 61
Query: 205 GSLMGAQGSSP 215
G+ P
Sbjct: 62 GASSSDSNKDP 72
>gi|47207843|emb|CAF90661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 348
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 59/63 (93%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N++ RTNF+ +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 285 NSAIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 344
Query: 195 KEG 197
+EG
Sbjct: 345 REG 347
>gi|213513177|ref|NP_001133027.1| homeobox protein HoxD1aa [Salmo salar]
gi|157816019|gb|ABV82028.1| homeobox protein HoxD1aa [Salmo salar]
gi|158702370|gb|ABW77557.1| homeobox protein HoxD1aa [Salmo salar]
Length = 301
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/68 (80%), Positives = 60/68 (88%), Gaps = 3/68 (4%)
Query: 134 LNNSG---RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQ 190
L+N+G RTNFT KQLTELEKEFHFNKYLTR+RR+EIA L LNETQVKIWFQNRRMKQ
Sbjct: 196 LSNAGAIPRTNFTTKQLTELEKEFHFNKYLTRSRRVEIAHGLHLNETQVKIWFQNRRMKQ 255
Query: 191 KKRIKEGI 198
KKR KEG+
Sbjct: 256 KKREKEGL 263
>gi|158702293|gb|ABW77490.1| homeobox protein HoxB1ba [Salmo salar]
Length = 299
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 16/104 (15%)
Query: 109 STDYTTPLTA-------LKYPPPAALSQH-----QSLLNNSGRTNFTNKQLTELEKEFHF 156
S D+ LT+ +K PP +S++ Q+++ RTNF KQLTELEKEFHF
Sbjct: 174 SDDFNADLTSKTFDWMKVKRNPPKTVSEYGVPGQQNVI----RTNFNTKQLTELEKEFHF 229
Query: 157 NKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILI 200
N+YLTRARR+E+A++L+LNETQVKIWFQNRRMKQKKR K G +
Sbjct: 230 NRYLTRARRVEVAAILELNETQVKIWFQNRRMKQKKREKAGTVF 273
>gi|154183842|gb|ABS70781.1| Hoxb1b [Haplochromis burtoni]
Length = 286
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 59/66 (89%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+N RTNFT KQLTELEKEFHFNKYL+RARR+E+A+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 198 HNVIRTNFTTKQLTELEKEFHFNKYLSRARRVEVAASLELNETQVKIWFQNRRMKQKKRE 257
Query: 195 KEGILI 200
K G ++
Sbjct: 258 KLGCVL 263
>gi|11139614|gb|AAG31762.1| homeobox B1 [Homo sapiens]
gi|120974174|gb|ABM46651.1| HOXB1 [Gorilla gorilla]
Length = 108
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 14 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 72
>gi|348522369|ref|XP_003448697.1| PREDICTED: homeobox protein Hox-B1b-like [Oreochromis niloticus]
Length = 286
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 59/66 (89%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+N RTNFT KQLTELEKEFHFNKYL+RARR+E+A+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 198 HNVIRTNFTTKQLTELEKEFHFNKYLSRARRVEVAASLELNETQVKIWFQNRRMKQKKRE 257
Query: 195 KEGILI 200
K G ++
Sbjct: 258 KLGCVL 263
>gi|261498715|gb|ACX84671.1| homeobox protein 1 [Gibbula varia]
Length = 316
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 60/77 (77%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
KYP P ++ +N++GRTNF NKQ E EKEFHFNKY TRARRIEIA+ L LNETQV
Sbjct: 40 KYPCPGGDFKYAGGINSTGRTNFWNKQAFEFEKEFHFNKYFTRARRIEIAAALGLNETQV 99
Query: 180 KIWFQNRRMKQKKRIKE 196
KIWFQN RMKQKKR+ E
Sbjct: 100 KIWFQNSRMKQKKRMSE 116
>gi|1333931|emb|CAA29426.1| unnamed protein product [Mus musculus]
gi|1333932|emb|CAA29427.1| unnamed protein product [Mus musculus]
Length = 60
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/58 (89%), Positives = 55/58 (94%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR
Sbjct: 2 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKR 59
>gi|410895377|ref|XP_003961176.1| PREDICTED: homeobox protein Hox-B1b-like [Takifugu rubripes]
Length = 280
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 1/67 (1%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+N RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 195 HNVIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQVKIWFQNRRMKQKKRE 254
Query: 195 K-EGILI 200
K G+L+
Sbjct: 255 KLGGVLV 261
>gi|119370783|sp|Q1KKW8.1|HXB1B_FUGRU RecName: Full=Homeobox protein Hox-B1b
gi|94482809|gb|ABF22426.1| homeobox protein HoxB1b [Takifugu rubripes]
Length = 280
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 1/67 (1%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+N RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 195 HNVIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQVKIWFQNRRMKQKKRE 254
Query: 195 K-EGILI 200
K G+L+
Sbjct: 255 KLGGVLV 261
>gi|387231273|gb|AFJ72347.1| homeobox B1, partial [Neophocaena phocaenoides]
Length = 107
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 14 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 72
>gi|317419673|emb|CBN81710.1| Homeobox protein Hox-B1b [Dicentrarchus labrax]
Length = 287
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 57/63 (90%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+N RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 196 HNVIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQVKIWFQNRRMKQKKRE 255
Query: 195 KEG 197
K G
Sbjct: 256 KLG 258
>gi|11967757|emb|CAC19382.1| Hox1/lab protein [Discocelis tigrina]
Length = 86
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 58/60 (96%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
+GRTNFTNKQLTELEKEF+FNKYLTRARRIEIA+ L LNETQVKIWFQNRRMKQKKR+++
Sbjct: 6 NGRTNFTNKQLTELEKEFYFNKYLTRARRIEIANALGLNETQVKIWFQNRRMKQKKRMEK 65
>gi|122934897|gb|ABM68193.1| HOXB1 [Lagothrix lagotricha]
Length = 108
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 14 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 72
>gi|336390933|dbj|BAK40158.1| Hox1 [Nipponacmea fuscoviridis]
Length = 240
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Query: 121 YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
Y PP+ + NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQVK
Sbjct: 174 YTPPSTAAPQTGP--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQVK 231
Query: 181 IWFQNRRMK 189
IWFQNRRMK
Sbjct: 232 IWFQNRRMK 240
>gi|150409838|gb|ABR68660.1| hoxb1b [Morone saxatilis]
Length = 289
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 57/63 (90%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+N RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVK+WFQNRRMKQKKR
Sbjct: 198 HNVIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQVKVWFQNRRMKQKKRE 257
Query: 195 KEG 197
K G
Sbjct: 258 KLG 260
>gi|358334415|dbj|GAA52858.1| homeotic protein labial, partial [Clonorchis sinensis]
Length = 678
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 60/95 (63%), Positives = 70/95 (73%), Gaps = 7/95 (7%)
Query: 102 HPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLT 161
+P TS T T L P++LS S+ +GR NFTNKQLTELEKEFHFN+YLT
Sbjct: 553 YPWNTSSDCTGATQTTVL----PSSLSGQNSM---NGRINFTNKQLTELEKEFHFNRYLT 605
Query: 162 RARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
RARRIEIA+ L L ETQVKIWFQNRRMKQKKR+++
Sbjct: 606 RARRIEIANDLGLTETQVKIWFQNRRMKQKKRMRD 640
>gi|62958659|gb|AAY23652.1| Hox protein [Oreochromis niloticus]
Length = 100
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 59/66 (89%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+N RTNFT KQLTELEKEFHFNKYL+RARR+E+A+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 12 HNVIRTNFTTKQLTELEKEFHFNKYLSRARRVEVAASLELNETQVKIWFQNRRMKQKKRE 71
Query: 195 KEGILI 200
K G ++
Sbjct: 72 KLGCVL 77
>gi|291461546|dbj|BAI83407.1| labial [Parasteatoda tepidariorum]
Length = 341
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
SGRTNF+ KQLTELEKEFHF+KYL RARRIEIAS L LNETQVKIWFQNRRMK KKR+K+
Sbjct: 235 SGRTNFSTKQLTELEKEFHFHKYLNRARRIEIASSLGLNETQVKIWFQNRRMKAKKRLKD 294
>gi|339241423|ref|XP_003376637.1| homeotic protein labial [Trichinella spiralis]
gi|316974634|gb|EFV58118.1| homeotic protein labial [Trichinella spiralis]
Length = 218
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
Query: 127 LSQHQSLLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
L H S L NSG RTNFT KQLTELEKEFH N+YLTRARRIEIAS L LNETQVK
Sbjct: 51 LEGHNSNLLNSGCTSVPNRTNFTTKQLTELEKEFHTNRYLTRARRIEIASQLGLNETQVK 110
Query: 181 IWFQNRRMKQKKRIKE 196
IWFQNRRMKQKK +KE
Sbjct: 111 IWFQNRRMKQKKHLKE 126
>gi|790874|gb|AAB17583.1| homeodomain protein, partial [Polycelis nigra]
Length = 99
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N +GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA + L+ETQ+KIWFQNRRMKQK+R
Sbjct: 23 NITGRTNFTNKQLTELEKEFHFNQYLTRARRIEIAKSMTLSETQIKIWFQNRRMKQKRRQ 82
Query: 195 K-EGILIGVGEGSLM 208
K I + + SL+
Sbjct: 83 KARKIETSLTDQSLL 97
>gi|385654532|gb|AFI62026.1| Hox-D1a [Anguilla japonica]
Length = 294
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 56/64 (87%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
+ RT+FT KQLTELEKEFHFNKYLT+ RR+EIA L LNETQVKIWFQNRRMKQKKR KE
Sbjct: 200 TARTSFTTKQLTELEKEFHFNKYLTKTRRVEIAHNLHLNETQVKIWFQNRRMKQKKREKE 259
Query: 197 GILI 200
G+ +
Sbjct: 260 GLSV 263
>gi|387232063|gb|AFJ72742.1| homeobox D1, partial [Cynopterus sphinx]
Length = 69
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 53/55 (96%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR
Sbjct: 15 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKR 69
>gi|270341323|gb|AAS07614.2| labial homeodomain protein 1 [Perionyx excavatus]
Length = 272
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 54/56 (96%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
GRTNFTNKQLTELEKEFHF++YLTR+RRIEIA+ L LNETQ+KIWFQNRRMKQKKR
Sbjct: 158 GRTNFTNKQLTELEKEFHFSRYLTRSRRIEIAASLGLNETQIKIWFQNRRMKQKKR 213
>gi|332692535|gb|AEE90210.1| Homeobox D1a [Anguilla anguilla]
Length = 296
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 56/64 (87%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
+ RT+FT KQLTELEKEFHFNKYL++ RR+EIA L LNETQVKIWFQNRRMKQKKR KE
Sbjct: 202 TARTSFTTKQLTELEKEFHFNKYLSKTRRVEIAHNLHLNETQVKIWFQNRRMKQKKREKE 261
Query: 197 GILI 200
G+ +
Sbjct: 262 GLSV 265
>gi|326454542|gb|ADZ74206.1| homeodomain protein HoxA1a [Culter alburnus]
Length = 276
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/66 (81%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIE-IASVLQLNETQ-VKIWFQNRRMKQKKR 193
N+ RTNFT KQLTELEKEFH NKYLTRARR+E IA+ LQLNETQ VKIWF+NRRMKQKKR
Sbjct: 207 NTVRTNFTTKQLTELEKEFHSNKYLTRARRVEHIAAALQLNETQIVKIWFRNRRMKQKKR 266
Query: 194 IKEGIL 199
KEG+L
Sbjct: 267 EKEGVL 272
>gi|5739140|gb|AAD50360.1|AF104008_1 labial protein [Thermobia domestica]
Length = 80
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/52 (96%), Positives = 51/52 (98%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRR 187
N+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVKIWFQNRR
Sbjct: 29 NAGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRR 80
>gi|34304653|gb|AAQ63432.1| Hox1 [Oikopleura dioica]
Length = 60
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 54/59 (91%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
N SGRT F+ +QLTELEKEFH+NKYLTRARR+EIAS L LNETQVKIWFQNRRMKQKKR
Sbjct: 1 NGSGRTTFSTRQLTELEKEFHYNKYLTRARRVEIASNLALNETQVKIWFQNRRMKQKKR 59
>gi|115722908|ref|XP_781966.2| PREDICTED: uncharacterized protein LOC576580 [Strongylocentrotus
purpuratus]
Length = 397
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA++L LNETQVKIWFQN
Sbjct: 250 NNNGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAMLGLNETQVKIWFQN 300
>gi|193948|gb|AAA37850.1| Hox-2.9 homeobox protein, partial [Mus musculus]
Length = 61
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 53/55 (96%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR
Sbjct: 5 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKR 59
>gi|121308829|dbj|BAF43721.1| transcription factor Hox1 [Metacrinus rotundus]
Length = 306
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 69/105 (65%), Gaps = 7/105 (6%)
Query: 85 IGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSL----LNNSGRT 140
+G+ + P L+ L H HP+ + Y+ +K PP + NN+GRT
Sbjct: 173 MGIDRDSPPPTLTNLD-HQHPSGEAAIYS--WMKVKRNPPKTVKPANDFGTISANNNGRT 229
Query: 141 NFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
NFTNKQLTELEKEFHFNKYLTRARR+EIAS L LNETQVKIWFQN
Sbjct: 230 NFTNKQLTELEKEFHFNKYLTRARRVEIASQLGLNETQVKIWFQN 274
>gi|387232067|gb|AFJ72744.1| homeobox D1, partial [Hipposideros pomona]
Length = 68
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/55 (89%), Positives = 53/55 (96%)
Query: 145 KQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+L
Sbjct: 2 KQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGLL 56
>gi|393911492|gb|EJD76332.1| hypothetical protein LOAG_16680 [Loa loa]
Length = 239
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNFT QLTELEKE++ +KYL R RR EIAS+LQLNETQVKIWFQNRRMK+KKR K
Sbjct: 129 NAMRTNFTTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQVKIWFQNRRMKEKKRQK 188
Query: 196 EGILIGVG 203
E + G
Sbjct: 189 EQAFLARG 196
>gi|348521584|ref|XP_003448306.1| PREDICTED: hypothetical protein LOC100710504 [Oreochromis
niloticus]
Length = 296
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 57/66 (86%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
+N R +++ KQLTELEKEFHFNKYLTRARR+E+A LQL+ETQVK+WFQNRRMK+KK
Sbjct: 207 VNGPPRISYSTKQLTELEKEFHFNKYLTRARRVEVAGALQLSETQVKVWFQNRRMKEKKL 266
Query: 194 IKEGIL 199
++G+L
Sbjct: 267 QRDGLL 272
>gi|5817771|gb|AAD52911.1| labial protein [Porcellio scaber]
Length = 76
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 122 PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
P PA S++ RTNFT KQLTELEKEFHFNKYLTRARRIEIAS LQLNETQVK
Sbjct: 10 PKPAPKSEYGGGFGGGTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVK 69
Query: 181 IWFQNRR 187
IWFQNRR
Sbjct: 70 IWFQNRR 76
>gi|395540878|ref|XP_003772377.1| PREDICTED: homeobox protein Hox-A1-like [Sarcophilus harrisii]
Length = 116
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
S RT+F+ KQLTELEKEFH YL RARR E+AS LQ++ETQVKIWFQNRRMKQKKR KE
Sbjct: 30 SPRTSFSTKQLTELEKEFHLQHYLPRARRAEMASALQISETQVKIWFQNRRMKQKKREKE 89
Query: 197 GI 198
G+
Sbjct: 90 GL 91
>gi|324517390|gb|ADY46808.1| Homeobox protein ceh-13 [Ascaris suum]
Length = 184
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N RTNF+ QLTELEKE++ +KYL R RR EIAS+LQLNETQVKIWFQNRRMK+KKR K
Sbjct: 90 NVNRTNFSTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQVKIWFQNRRMKEKKRQK 149
Query: 196 EGILIGVGEGSLMGAQGSS 214
E + S+ G + S+
Sbjct: 150 EQAFLA-RRASIFGKRHSN 167
>gi|19702243|gb|AAL93216.1|AF410907_1 HoxQ8 [Petromyzon marinus]
Length = 60
Score = 99.4 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/55 (90%), Positives = 53/55 (96%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR
Sbjct: 5 RTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKR 59
>gi|387230963|gb|AFJ72192.1| homeobox A1, partial [Hipposideros pomona]
Length = 94
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/52 (90%), Positives = 50/52 (96%)
Query: 148 TELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
TELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 1 TELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 52
>gi|62084737|gb|AAX62801.1| Hox1 [Oikopleura dioica]
Length = 220
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 48/53 (90%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRR 187
N SGRT F+ +QLTELEKEFH+NKYLTRARR+EIAS L LNETQVKIWFQNRR
Sbjct: 168 NGSGRTTFSTRQLTELEKEFHYNKYLTRARRVEIASNLALNETQVKIWFQNRR 220
>gi|291360356|gb|ADD97671.1| homeobox B2 [Monodelphis domestica]
Length = 163
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ ++
Sbjct: 1 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQNQQKE 60
Query: 199 LIGVGEGSLMGA--QGSSP 215
L+ GEG+ GA +GS P
Sbjct: 61 LLD-GEGAYPGALEEGSDP 78
>gi|126308351|ref|XP_001372942.1| PREDICTED: homeobox protein Hox-B2 [Monodelphis domestica]
Length = 365
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ ++
Sbjct: 149 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQNQQKE 208
Query: 199 LIGVGEGSLMGA--QGSSP 215
L+ GEG+ GA +GS P
Sbjct: 209 LLD-GEGAYPGALEEGSDP 226
>gi|259013404|ref|NP_001158409.1| homeobox 2 [Saccoglossus kowalevskii]
gi|116574500|gb|ABK00018.1| hox 2 [Saccoglossus kowalevskii]
Length = 383
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT FTN QL ELEKEFH+NKYL R RRIEIAS+L L+E QVK+WFQNRRMK K++I +
Sbjct: 115 RTAFTNTQLLELEKEFHYNKYLCRPRRIEIASMLDLSERQVKVWFQNRRMKHKRQIMKAA 174
Query: 199 LIGV------GEGSLMGAQGSSPNG 217
+ G + S++ A SSP+G
Sbjct: 175 VSGSPIPNNETQNSMVSAT-SSPSG 198
>gi|327280448|ref|XP_003224964.1| PREDICTED: homeobox protein Hox-A2-like isoform 1 [Anolis
carolinensis]
Length = 385
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 60/89 (67%), Gaps = 8/89 (8%)
Query: 115 PLTALKYPPPAALSQHQSLL---NNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRI 166
P + P PA LS +SL N SG RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 118 PAASASTPGPACLSHKESLEISENGSGASRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 177
Query: 167 EIASVLQLNETQVKIWFQNRRMKQKKRIK 195
EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 178 EIAALLDLTERQVKVWFQNRRMKHKRQTQ 206
>gi|74267533|dbj|BAE44265.1| hoxB2a [Oryzias latipes]
gi|83016945|dbj|BAE53472.1| hoxB2a [Oryzias latipes]
Length = 412
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 118 ALKYPPPAALSQHQSLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQ 173
A YP P A Q + +G RT +TN QL ELEKEFHFNKYL R RR+EIA++L
Sbjct: 139 APSYPSPTAPGQAALDASAAGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLD 198
Query: 174 LNETQVKIWFQNRRMKQKKRIKEGILIGVGEG------SLMGAQGSSP 215
L E QVK+WFQNRRMK K++ G G L GA SSP
Sbjct: 199 LTERQVKVWFQNRRMKHKRQTTHHRDGGGGSPPSSAFEPLEGADASSP 246
>gi|123204442|gb|ABM73555.1| homeodomain protein [Megalobrama amblycephala]
Length = 71
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RTNFT KQLTEL+K+FHFNKY TRAR +E+A+ L LNETQVK+WFQNRRMKQKKR
Sbjct: 16 RTNFTTKQLTELDKDFHFNKYFTRARSVEVAATLDLNETQVKMWFQNRRMKQKKR 70
>gi|432871361|ref|XP_004071927.1| PREDICTED: homeobox protein Hox-B2a-like [Oryzias latipes]
Length = 425
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 72/134 (53%), Gaps = 26/134 (19%)
Query: 97 SPLGVHPHPTSP---STDYTTPLTALKYPPPAALSQHQSLLNNSG------RTNFTNKQL 147
+P +P PT+P S D +P + Q+ L+ S RT +TN QL
Sbjct: 137 TPAPSYPSPTAPGYASADVESPTDS-----------SQAALDASAAGSRRLRTAYTNTQL 185
Query: 148 TELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEG-- 205
ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ G G
Sbjct: 186 LELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHRDGGGGSPPS 245
Query: 206 ----SLMGAQGSSP 215
L GA SSP
Sbjct: 246 SAFEPLEGADASSP 259
>gi|332692463|gb|AEE90146.1| Homeobox A2a [Anguilla anguilla]
Length = 366
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 138 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKD 197
Query: 199 LIGVGEGSLMGAQGSSPN----GGLY 220
G GEG G + P+ G LY
Sbjct: 198 HHG-GEGKPRGGEDEGPSEEEPGSLY 222
>gi|385654463|gb|AFI61966.1| Hox-A2a [Anguilla japonica]
Length = 366
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 138 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKD 197
Query: 199 LIGVGEGSLMGAQGSSPN----GGLY 220
G GEG G + P+ G LY
Sbjct: 198 HHG-GEGKPRGGEDEGPSEEEPGSLY 222
>gi|296488402|tpg|DAA30515.1| TPA: homeobox protein Hox-A2 [Bos taurus]
gi|440899271|gb|ELR50600.1| Homeobox protein Hox-A2 [Bos grunniens mutus]
Length = 372
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 8/89 (8%)
Query: 115 PLTALKYPPPAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRI 166
P +A PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 111 PASAASATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 170
Query: 167 EIASVLQLNETQVKIWFQNRRMKQKKRIK 195
EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 171 EIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
>gi|115494928|ref|NP_001069322.1| homeobox protein Hox-A2 [Bos taurus]
gi|122145592|sp|Q0VCS4.1|HXA2_BOVIN RecName: Full=Homeobox protein Hox-A2
gi|111307024|gb|AAI20031.1| Homeobox A2 [Bos taurus]
Length = 372
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 60/89 (67%), Gaps = 8/89 (8%)
Query: 115 PLTALKYPPPAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRI 166
P +A PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 111 PASAASATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 170
Query: 167 EIASVLQLNETQVKIWFQNRRMKQKKRIK 195
EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 171 EIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
>gi|213511933|ref|NP_001133020.1| homeobox protein HoxC5bb [Salmo salar]
gi|157815999|gb|ABV82018.1| homeobox protein HoxC5bb [Salmo salar]
gi|158702359|gb|ABW77547.1| homeobox protein HoxC5bb [Salmo salar]
Length = 240
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 73 SSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQS 132
S L ++ K + G KV + P+ + H T P T P YP L
Sbjct: 114 SDLSEMPIRKTQTGEIKVGTLQPVQPVTLANHSTQPQTSEQQPQI---YPWMTKLHMGHE 170
Query: 133 LLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT++T Q ELEKEFHFN+YLTR RRIEIA L LNE Q+KIWFQNRRMK KK
Sbjct: 171 ADGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLNERQIKIWFQNRRMKWKK 230
Query: 193 ----RIKEGI 198
++KE I
Sbjct: 231 DSKLKMKESI 240
>gi|344285935|ref|XP_003414715.1| PREDICTED: homeobox protein Hox-B2-like [Loxodonta africana]
Length = 355
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|410901649|ref|XP_003964308.1| PREDICTED: homeobox protein Hox-B2a-like [Takifugu rubripes]
gi|82236744|sp|Q6IEI0.1|HXB2A_FUGRU RecName: Full=Homeobox protein Hox-B2a
gi|45772173|tpg|DAA05216.1| TPA_exp: Hoxb2a [Takifugu rubripes]
gi|94482800|gb|ABF22418.1| homeobox protein HoxB2a [Takifugu rubripes]
Length = 415
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 55/85 (64%), Gaps = 8/85 (9%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 177 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTHHRD 236
Query: 199 LIGVGEGS--------LMGAQGSSP 215
G G S L GA SSP
Sbjct: 237 GSGGGNDSNEPGGFEPLEGADASSP 261
>gi|255742443|gb|ACU32557.1| homeobox protein HoxB3 [Callorhinchus milii]
Length = 394
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 157 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKTK 216
Query: 198 ILIGVGEGSLMGA 210
++G G S G+
Sbjct: 217 GMVGSGGQSPTGS 229
>gi|400180329|gb|AFP73297.1| Hoxa2alpha [Polyodon spathula]
Length = 365
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 12/97 (12%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG------RTNFTNKQLTELEKEFHFNK 158
PTS +T +T AL +PP + +L+N G RT +TN QL ELEKEFHFNK
Sbjct: 104 PTSSATASST--EALCFPPKDS----PEILDNVGGGSRRLRTAYTNTQLLELEKEFHFNK 157
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
YL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 158 YLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 194
>gi|345314258|ref|XP_001517118.2| PREDICTED: hypothetical protein LOC100087100 [Ornithorhynchus
anatinus]
Length = 439
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMKQK++ +
Sbjct: 154 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKQKRQTRH 211
>gi|241756337|ref|XP_002406417.1| proboscipedia, putative [Ixodes scapularis]
gi|215506154|gb|EEC15648.1| proboscipedia, putative [Ixodes scapularis]
Length = 521
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 6 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 61
>gi|165873657|gb|ABY67953.1| proboscipedia hox protein [Capitella teleta]
Length = 238
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Query: 99 LGVHPHPTSPSTDYTTP--LTALKYPPPAALSQHQSLLNNSG----RTNFTNKQLTELEK 152
LG P + + D T+ LT+ PPP + S + ++ RT +TN QL ELEK
Sbjct: 84 LGASDFPEAMTQDITSSGLLTSGVAPPPTSCGNTGSSVASNHPRRLRTAYTNTQLLELEK 143
Query: 153 EFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGSLMGAQG 212
EFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++ G G G+ A+
Sbjct: 144 EFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKFKRQ------TGKGSGNSPDAEC 197
Query: 213 SSPNG 217
SP G
Sbjct: 198 VSPEG 202
>gi|426355734|ref|XP_004045263.1| PREDICTED: homeobox protein Hox-A2 [Gorilla gorilla gorilla]
Length = 368
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 116 PACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 175
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 176 ERQVKVWFQNRRMKHKRQTQ 195
>gi|344249146|gb|EGW05250.1| Homeobox protein Hox-B2 [Cricetulus griseus]
Length = 407
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
Query: 123 PPAALSQHQSLLNNSG-----------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASV 171
PP A SQH RT +TN QL ELEKEFHFNKYL R RR+EIA++
Sbjct: 170 PPMAPSQHHGPYGPGLSESGGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAAL 229
Query: 172 LQLNETQVKIWFQNRRMKQKKRIKE 196
L L E QVK+WFQNRRMK K++ +
Sbjct: 230 LDLTERQVKVWFQNRRMKHKRQTQH 254
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 168 IASVLQLNETQVKIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
+A++L L+E Q+KIWFQNRRMK KK K +G+ G S G+
Sbjct: 1 MANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 44
>gi|226822846|gb|ACO83081.1| homeobox A2 (predicted) [Dasypus novemcinctus]
Length = 373
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 121 PACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 180
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 181 ERQVKVWFQNRRMKHKRQTQ 200
>gi|299473901|gb|ADJ18233.1| Hox2 protein [Gibbula varia]
Length = 621
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 51/69 (73%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++ + G
Sbjct: 120 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKYKRQSQSGR 179
Query: 199 LIGVGEGSL 207
G+ SL
Sbjct: 180 SKSDGDDSL 188
>gi|281182580|ref|NP_001162366.1| homeobox protein Hox-A2 [Papio anubis]
gi|189044223|sp|A9L937.1|HXA2_PAPAN RecName: Full=Homeobox protein Hox-A2
gi|160904216|gb|ABX52200.1| homeobox A2 (predicted) [Papio anubis]
Length = 377
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 125 PACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 184
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 185 ERQVKVWFQNRRMKHKRQTQ 204
>gi|311275748|ref|XP_003134891.1| PREDICTED: homeobox protein Hox-A2-like [Sus scrofa]
Length = 380
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 128 PACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 187
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 188 ERQVKVWFQNRRMKHKRQTQ 207
>gi|332692492|gb|AEE90172.1| Homeobox B2a [Anguilla anguilla]
Length = 377
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 4/81 (4%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI---K 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ K
Sbjct: 153 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTYHK 212
Query: 196 EGILIGVGEGSLM-GAQGSSP 215
EG G M GA +SP
Sbjct: 213 EGNDSDTGGFEPMEGADAASP 233
>gi|385654483|gb|AFI61984.1| Hox-B2a [Anguilla japonica]
Length = 377
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 4/81 (4%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI---K 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ K
Sbjct: 153 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTYHK 212
Query: 196 EGILIGVGEGSLM-GAQGSSP 215
EG G M GA +SP
Sbjct: 213 EGNDSDTGGFEPMEGADAASP 233
>gi|3150080|emb|CAA06645.1| hox3 [Cupiennius salei]
Length = 576
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q+KIWFQNRRMK KK K +
Sbjct: 213 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMANLLNLSERQIKIWFQNRRMKYKKEQKSK 272
Query: 197 GILIGVGEGSLMGAQGS 213
G+ I E L GS
Sbjct: 273 GLYIQQSEKELSSPVGS 289
>gi|410980979|ref|XP_003996851.1| PREDICTED: homeobox protein Hox-B2, partial [Felis catus]
Length = 262
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 60 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 116
>gi|291405875|ref|XP_002719362.1| PREDICTED: homeobox B2 [Oryctolagus cuniculus]
Length = 347
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 142 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 198
>gi|363743434|ref|XP_003642840.1| PREDICTED: homeobox protein Hox-B2 [Gallus gallus]
Length = 323
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 6/80 (7%)
Query: 122 PPPAALS--QHQSLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
P PAA S Q L ++SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 121 PIPAAGSPADTQGLADSSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 180
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 181 ERQVKVWFQNRRMKHKRQTQ 200
>gi|47216996|emb|CAG01624.1| unnamed protein product [Tetraodon nigroviridis]
Length = 412
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 55/85 (64%), Gaps = 8/85 (9%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 177 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTHHRD 236
Query: 199 LIGVGEGS--------LMGAQGSSP 215
G G + L GA SSP
Sbjct: 237 GSGGGNDANEPGGFEPLEGADASSP 261
>gi|395756599|ref|XP_003780150.1| PREDICTED: homeobox protein Hox-B2 [Pongo abelii]
Length = 356
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|355568479|gb|EHH24760.1| hypothetical protein EGK_08475 [Macaca mulatta]
Length = 356
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
>gi|387598532|gb|AFJ91922.1| homeodomain transcription factor 2 [Platynereis dumerilii]
Length = 405
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++ +
Sbjct: 132 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKFKRQTQTK- 190
Query: 199 LIGVGEGS 206
GVG+GS
Sbjct: 191 --GVGDGS 196
>gi|397514556|ref|XP_003827547.1| PREDICTED: homeobox protein Hox-B2 [Pan paniscus]
Length = 356
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|332259409|ref|XP_003278781.1| PREDICTED: homeobox protein Hox-B2 [Nomascus leucogenys]
Length = 356
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|133740634|emb|CAL91855.1| proboscipedia [Cupiennius salei]
Length = 153
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI---- 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 25 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTSVMK 84
Query: 195 ---KEGILIGVGEGSLMGAQGSS 214
K+G+ + GS + G S
Sbjct: 85 DDDKDGVDRSLDSGSDIATGGDS 107
>gi|4504465|ref|NP_002136.1| homeobox protein Hox-B2 [Homo sapiens]
gi|123270|sp|P14652.1|HXB2_HUMAN RecName: Full=Homeobox protein Hox-B2; AltName: Full=Homeobox
protein Hox-2.8; AltName: Full=Homeobox protein Hox-2H;
AltName: Full=K8
gi|32382|emb|CAA34655.1| unnamed protein product [Homo sapiens]
gi|49901881|gb|AAH74805.1| Homeobox B2 [Homo sapiens]
gi|49902074|gb|AAH74806.1| Homeobox B2 [Homo sapiens]
gi|119615149|gb|EAW94743.1| homeobox B2, isoform CRA_a [Homo sapiens]
gi|167773151|gb|ABZ92010.1| homeobox B2 [synthetic construct]
Length = 356
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|114666362|ref|XP_001173066.1| PREDICTED: homeobox protein Hox-B2 [Pan troglodytes]
gi|410218434|gb|JAA06436.1| homeobox B2 [Pan troglodytes]
gi|410287716|gb|JAA22458.1| homeobox B2 [Pan troglodytes]
gi|410337653|gb|JAA37773.1| homeobox B2 [Pan troglodytes]
Length = 356
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|431890738|gb|ELK01617.1| Homeobox protein Hox-B2 [Pteropus alecto]
Length = 352
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|345323593|ref|XP_003430727.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A2-like
[Ornithorhynchus anatinus]
Length = 374
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L+ ++L +NSG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 121 PACLNHKETLEIPDNSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 180
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 181 ERQVKVWFQNRRMKHKRQTQ 200
>gi|297272473|ref|XP_001087920.2| PREDICTED: hypothetical protein LOC696226 [Macaca mulatta]
Length = 1147
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 47/58 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 937 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQH 994
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 159 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 215
>gi|187438866|gb|ACD10895.1| Hoxb2a [Oryzias latipes]
Length = 206
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 1 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHR 60
Query: 199 LIGVGEG------SLMGAQGSSP 215
G G L GA SSP
Sbjct: 61 DGGGGSPPSSAFEPLEGADASSP 83
>gi|410259446|gb|JAA17689.1| homeobox B2 [Pan troglodytes]
Length = 356
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|348562611|ref|XP_003467103.1| PREDICTED: homeobox protein Hox-B2-like [Cavia porcellus]
Length = 572
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 357 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 413
>gi|296202591|ref|XP_002748521.1| PREDICTED: homeobox protein Hox-B2 [Callithrix jacchus]
Length = 356
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
>gi|311267488|ref|XP_003131594.1| PREDICTED: homeobox protein Hox-B2-like [Sus scrofa]
Length = 353
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|18858833|ref|NP_571191.1| homeobox protein Hox-B2a [Danio rerio]
gi|60392403|sp|O42367.2|HXB2A_DANRE RecName: Full=Homeobox protein Hox-B2a; Short=Hox-B2
gi|3420297|gb|AAD03832.1| homeobox transcription factor [Danio rerio]
gi|26984640|emb|CAD59117.1| SI:dZ254O17.7 (homeo box protein B2a) [Danio rerio]
gi|41944544|gb|AAH65967.1| Homeo box B2a [Danio rerio]
Length = 390
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 162 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHR 221
Query: 199 LIGVGEGS----LMGAQGSSP 215
GE S L G SSP
Sbjct: 222 DGQEGEPSGFDLLEGTDASSP 242
>gi|403279479|ref|XP_003931277.1| PREDICTED: homeobox protein Hox-B2 [Saimiri boliviensis
boliviensis]
Length = 353
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
>gi|5002500|dbj|BAA78621.1| AmphiHox2 [Branchiostoma floridae]
Length = 205
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 81/153 (52%), Gaps = 28/153 (18%)
Query: 87 VTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALK-----YPPPAALSQHQSLLN------ 135
T +++ S+LSP T P+ P LK P P + ++ L
Sbjct: 51 TTCLELNSDLSP-------TQPANIADFPWVKLKKSVRILPSPVSNTEEADFLTSPTDQV 103
Query: 136 NSGR---TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
NS R T FTN QL ELEKEFH+NKY+ + RR EIAS L LNE QVKIWFQNRRM+QK+
Sbjct: 104 NSSRRLRTVFTNTQLLELEKEFHYNKYVCKPRRKEIASYLDLNERQVKIWFQNRRMRQKR 163
Query: 193 RIKEG-ILIGVGEGSLMG------AQGSSPNGG 218
R +G IG G+ A+ SP GG
Sbjct: 164 RDTKGRSEIGTDPGTAAEPADGGRAEEGSPGGG 196
>gi|56549003|gb|AAV97665.1| Hox protein [Oreochromis niloticus]
Length = 101
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 49/58 (84%)
Query: 140 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
T F+ +QLTELEKEFHF+KYLTR R+EIA+ L+L TQVKIWFQNR MKQKKR +EG
Sbjct: 1 TKFSTRQLTELEKEFHFSKYLTRGPRVEIAATLELKGTQVKIWFQNRSMKQKKRDREG 58
>gi|426355738|ref|XP_004045265.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Gorilla gorilla
gorilla]
gi|426355740|ref|XP_004045266.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Gorilla gorilla
gorilla]
Length = 443
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|440910527|gb|ELR60321.1| Homeobox protein Hox-B2 [Bos grunniens mutus]
Length = 354
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
>gi|88604708|gb|ABD46725.1| homeobox protein proboscipedia [Nymphon gracile]
Length = 187
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L+L E QVK+WFQNRRMK K++
Sbjct: 16 RTAYTNNQLLELEKEFHFNKYLCRPRRIEIAASLELTERQVKVWFQNRRMKHKRQSTGK- 74
Query: 199 LIGVGEGSLMGAQGSSPNG 217
G +GS G +GSS +G
Sbjct: 75 -SGDDKGSDDGMKGSSKSG 92
>gi|170649676|gb|ACB21261.1| homeobox A3 isoform a (predicted) [Callicebus moloch]
Length = 443
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|293340385|ref|XP_002724587.1| PREDICTED: homeobox protein Hox-B2 [Rattus norvegicus]
gi|293351796|ref|XP_002727852.1| PREDICTED: homeobox protein Hox-B2 [Rattus norvegicus]
gi|149053989|gb|EDM05806.1| homeo box B2 (predicted) [Rattus norvegicus]
Length = 355
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
>gi|403288101|ref|XP_003935253.1| PREDICTED: homeobox protein Hox-A3 [Saimiri boliviensis
boliviensis]
Length = 416
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 168 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 224
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 225 ----GKGMLTSSGGQSPS 238
>gi|344270552|ref|XP_003407108.1| PREDICTED: homeobox protein Hox-A3 [Loxodonta africana]
Length = 441
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|255755639|dbj|BAH96545.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 361
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 48/55 (87%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT FTN QL ELEKEFH+N+YL R RRIEIAS+L+L+E QVK+WFQNRRMK K++
Sbjct: 114 RTAFTNTQLLELEKEFHYNRYLCRPRRIEIASMLELSERQVKVWFQNRRMKHKRQ 168
>gi|120974125|gb|ABM46643.1| HOXA3 [Gorilla gorilla]
Length = 267
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 19 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 75
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 76 ----GKGMLTSSGGQSPS 89
>gi|300797668|ref|NP_001178264.1| homeobox protein Hox-B2 [Bos taurus]
gi|296476536|tpg|DAA18651.1| TPA: homeobox B2-like [Bos taurus]
Length = 354
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
>gi|284005059|ref|NP_001164870.1| homeobox protein Hox-A3 [Oryctolagus cuniculus]
gi|217418306|gb|ACK44308.1| homeobox A3 isoform a (predicted) [Oryctolagus cuniculus]
Length = 443
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|184185534|gb|ACC68935.1| homeobox A3 isoform a (predicted) [Rhinolophus ferrumequinum]
Length = 443
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|301754119|ref|XP_002912921.1| PREDICTED: homeobox protein Hox-A3-like [Ailuropoda melanoleuca]
Length = 324
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 76 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 132
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 133 ----GKGMLTSSGGQSPS 146
>gi|73976155|ref|XP_864544.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Canis lupus
familiaris]
Length = 442
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 252
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 253 ----GKGMLTSSGGQSPS 266
>gi|14916592|sp|Q9IA20.1|HXA2_HETFR RecName: Full=Homeobox protein Hox-A2
gi|7271829|gb|AAF44640.1|AF224262_2 HoxA2 [Heterodontus francisci]
Length = 363
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 79/137 (57%), Gaps = 35/137 (25%)
Query: 92 IPSELSPLGVHPHPTSP--STDYTTPLTALKYPP---------------------PAA-- 126
IPS L+P HP + P S + T+PL A PP PAA
Sbjct: 56 IPS-LNP-SSHPRQSRPKQSPNGTSPLPAATLPPEYPWMKEKKNSKKNHLPASSGPAASC 113
Query: 127 LSQHQS--LLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 178
LSQ ++ + +N+G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 114 LSQKETHEIPDNTGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 173
Query: 179 VKIWFQNRRMKQKKRIK 195
VK+WFQNRRMK K++ +
Sbjct: 174 VKVWFQNRRMKHKRQTQ 190
>gi|311275746|ref|XP_003134890.1| PREDICTED: homeobox protein Hox-A3 [Sus scrofa]
Length = 443
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|281182381|ref|NP_001162535.1| homeobox protein Hox-A3 [Papio anubis]
gi|160904217|gb|ABX52201.1| homeobox A3, isoform 2 (predicted) [Papio anubis]
Length = 443
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|109067067|ref|XP_001092102.1| PREDICTED: homeobox protein Hox-A3-like isoform 4 [Macaca mulatta]
gi|109067069|ref|XP_001092226.1| PREDICTED: homeobox protein Hox-A3-like isoform 5 [Macaca mulatta]
gi|355560740|gb|EHH17426.1| hypothetical protein EGK_13833 [Macaca mulatta]
Length = 443
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|395830940|ref|XP_003788570.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Otolemur garnettii]
gi|395830942|ref|XP_003788571.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Otolemur garnettii]
gi|202070725|gb|ACH95313.1| homeobox A3 isoform a (predicted) [Otolemur garnettii]
Length = 443
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|30585409|gb|AAP36977.1| Homo sapiens homeo box A3 [synthetic construct]
gi|61370826|gb|AAX43558.1| homeobox A3 [synthetic construct]
gi|61370831|gb|AAX43559.1| homeobox A3 [synthetic construct]
Length = 444
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|410952520|ref|XP_003982927.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Felis catus]
gi|410952522|ref|XP_003982928.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Felis catus]
Length = 441
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|114053055|ref|NP_001040556.1| homeobox B2 [Rattus norvegicus]
gi|89475550|gb|ABD73307.1| androgen-dependent epididymal homeobox-like protein [Rattus
norvegicus]
Length = 305
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 47/58 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 131 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQH 188
>gi|55628352|ref|XP_527698.1| PREDICTED: homeobox protein Hox-A3 isoform 6 [Pan troglodytes]
gi|114612529|ref|XP_001162505.1| PREDICTED: homeobox protein Hox-A3 isoform 4 [Pan troglodytes]
gi|397472861|ref|XP_003807952.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Pan paniscus]
gi|397472863|ref|XP_003807953.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Pan paniscus]
gi|410254236|gb|JAA15085.1| homeobox A3 [Pan troglodytes]
Length = 443
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|359754104|gb|AEV59526.1| HOXB2 [Macropus eugenii]
Length = 364
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQNQHKE 206
Query: 199 LIGVGEGSLMGA--QGSSP 215
+ GE + GA +GS P
Sbjct: 207 PLD-GEAAYPGALEEGSDP 224
>gi|254212180|gb|ACT65755.1| Hoxa2 [Leucoraja erinacea]
Length = 363
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 76/137 (55%), Gaps = 35/137 (25%)
Query: 92 IPSELSPLGVHPHPTSP--STDYTTPLTALKYPP----------------PAALSQHQSL 133
IPS L+P HP + P S + T+PL A PP PA+ +S
Sbjct: 56 IPS-LNP-SSHPRQSRPKQSPNGTSPLPAATLPPEYPWMKEKKNSKKNHLPASCGPAESC 113
Query: 134 L---------NNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 178
L +N+G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 114 LSQKETHEIPDNTGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 173
Query: 179 VKIWFQNRRMKQKKRIK 195
VK+WFQNRRMK K++ +
Sbjct: 174 VKVWFQNRRMKHKRQTQ 190
>gi|354474772|ref|XP_003499604.1| PREDICTED: homeobox protein Hox-B2-like [Cricetulus griseus]
Length = 354
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
>gi|193786467|dbj|BAG51750.1| unnamed protein product [Homo sapiens]
Length = 443
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|13562112|ref|NP_109377.1| homeobox protein Hox-A3 isoform a [Homo sapiens]
gi|24497513|ref|NP_705895.1| homeobox protein Hox-A3 isoform a [Homo sapiens]
gi|6016293|sp|O43365.1|HXA3_HUMAN RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-1E
gi|15929500|gb|AAH15180.1| Homeobox A3 [Homo sapiens]
gi|41350073|gb|AAS00376.1| unknown [Homo sapiens]
gi|51094981|gb|EAL24225.1| homeo box A3 [Homo sapiens]
gi|119614271|gb|EAW93865.1| homeobox A3, isoform CRA_a [Homo sapiens]
gi|119614272|gb|EAW93866.1| homeobox A3, isoform CRA_a [Homo sapiens]
gi|123980138|gb|ABM81898.1| homeobox A3 [synthetic construct]
gi|123994943|gb|ABM85073.1| homeobox A3 [synthetic construct]
gi|208966490|dbj|BAG73259.1| homeobox A3 [synthetic construct]
gi|208968495|dbj|BAG74086.1| homeobox A3 [synthetic construct]
Length = 443
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|226822847|gb|ACO83082.1| homeobox A3 isoform a (predicted) [Dasypus novemcinctus]
Length = 441
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|109473519|ref|XP_001058923.1| PREDICTED: homeobox protein Hox-A3 [Rattus norvegicus]
gi|392347312|ref|XP_003749795.1| PREDICTED: homeobox protein Hox-A3 [Rattus norvegicus]
gi|392356111|ref|XP_003752226.1| PREDICTED: homeobox protein Hox-A3-like [Rattus norvegicus]
gi|149033359|gb|EDL88160.1| rCG52387, isoform CRA_a [Rattus norvegicus]
Length = 444
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 252
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 253 ----GKGMLTSSGGQSPS 266
>gi|121503173|gb|ABM55137.1| HOXA3 [Macaca mulatta]
Length = 267
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 19 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 75
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 76 ----GKGMLTSSGGQSPS 89
>gi|121483843|gb|ABM54217.1| HOXA3 [Pan paniscus]
Length = 267
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 19 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 75
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 76 ----GKGMLTSSGGQSPS 89
>gi|158702271|gb|ABW77470.1| homeobox protein HoxB2aa [Salmo salar]
Length = 381
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 56/83 (67%), Gaps = 8/83 (9%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI---- 194
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 156 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHS 215
Query: 195 --KEGILIGVGEGSLMGAQGSSP 215
+EG G L GA SSP
Sbjct: 216 EGQEGDPGGFEP--LEGADASSP 236
>gi|45775268|gb|AAS77231.1| transcription factor Hox2 [Lethenteron camtschaticum]
Length = 394
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 161 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 217
>gi|46275824|ref|NP_034582.1| homeobox protein Hox-A3 [Mus musculus]
gi|2811092|sp|P02831.2|HXA3_MOUSE RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-1.5; AltName: Full=Homeobox protein MO-10
gi|1888441|emb|CAA72404.1| homeobox-containing transcription factor [Mus musculus]
gi|66794501|gb|AAH96612.1| Homeo box A3 [Mus musculus]
gi|148666235|gb|EDK98651.1| homeobox A3, isoform CRA_a [Mus musculus]
gi|148666236|gb|EDK98652.1| homeobox A3, isoform CRA_a [Mus musculus]
Length = 443
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 252
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 253 ----GKGMLTSSGGQSPS 266
>gi|395826610|ref|XP_003786510.1| PREDICTED: homeobox protein Hox-B2 [Otolemur garnettii]
Length = 356
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
>gi|157816095|gb|ABV82066.1| homeobox protein HoxB2aa [Salmo salar]
gi|158702283|gb|ABW77481.1| homeobox protien HoxB2ab [Salmo salar]
Length = 381
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 56/83 (67%), Gaps = 8/83 (9%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI---- 194
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 156 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHR 215
Query: 195 --KEGILIGVGEGSLMGAQGSSP 215
+EG G L GA SSP
Sbjct: 216 EGQEGDPGGFEP--LEGADASSP 236
>gi|116003871|ref|NP_001070293.1| homeobox protein Hox-A3 [Bos taurus]
gi|122132253|sp|Q08DG7.1|HXA3_BOVIN RecName: Full=Homeobox protein Hox-A3
gi|115304899|gb|AAI23760.1| Homeobox A3 [Bos taurus]
gi|296488434|tpg|DAA30547.1| TPA: homeobox protein Hox-A3 [Bos taurus]
Length = 442
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|213513520|ref|NP_001133054.1| homeobox protein HoxB2ab [Salmo salar]
gi|157816113|gb|ABV82075.1| homeobox protein HoxB2ab [Salmo salar]
gi|157816131|gb|ABV82083.1| homeobox protein HoxB2ab2 [Salmo salar]
Length = 380
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 56/83 (67%), Gaps = 8/83 (9%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI---- 194
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 156 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHR 215
Query: 195 --KEGILIGVGEGSLMGAQGSSP 215
+EG G L GA SSP
Sbjct: 216 EGQEGDPGGFEP--LEGADASSP 236
>gi|296209383|ref|XP_002751498.1| PREDICTED: homeobox protein Hox-A3 [Callithrix jacchus]
gi|167427226|gb|ABZ80207.1| homeobox A3 isoform a (predicted) [Callithrix jacchus]
Length = 443
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|355694995|gb|AER99858.1| homeobox A3 [Mustela putorius furo]
Length = 417
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 169 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 225
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 226 ----GKGMLTSSGGQSPS 239
>gi|348564406|ref|XP_003467996.1| PREDICTED: homeobox protein Hox-A3-like [Cavia porcellus]
Length = 444
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
>gi|190576598|gb|ACE79086.1| homeobox A3 (predicted) [Sorex araneus]
Length = 442
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 194 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 250
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 251 ----GKGVLTSSGGQSPS 264
>gi|73966230|ref|XP_851108.1| PREDICTED: homeobox protein Hox-B2 [Canis lupus familiaris]
Length = 342
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 143 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
>gi|348517823|ref|XP_003446432.1| PREDICTED: homeobox protein Hox-B2a [Oreochromis niloticus]
Length = 436
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 179 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 233
>gi|94158904|ref|NP_598793.2| homeobox protein Hox-B2 [Mus musculus]
gi|114149319|sp|P0C1T1.1|HXB2_MOUSE RecName: Full=Homeobox protein Hox-B2; AltName: Full=Homeobox
protein Hox-2.8
gi|223459934|gb|AAI38496.1| Homeo box B2 [Mus musculus]
gi|223460298|gb|AAI38495.1| Homeo box B2 [Mus musculus]
Length = 354
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|429510498|gb|AFZ94987.1| transcription factor Hox2 [Petromyzon marinus]
Length = 385
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 155 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 211
>gi|226446767|gb|ACO58663.1| homeobox b2a [Oreochromis niloticus]
Length = 436
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 179 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 233
>gi|410911098|ref|XP_003969027.1| PREDICTED: homeobox protein Hox-A2a-like [Takifugu rubripes]
gi|119370770|sp|Q1KL11.1|HXA2A_FUGRU RecName: Full=Homeobox protein Hox-A2a
gi|94482763|gb|ABF22383.1| homeobox protein HoxA2a [Takifugu rubripes]
Length = 363
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 197
>gi|62958642|gb|AAY23647.1| Hox protein [Oreochromis niloticus]
Length = 276
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 19 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 73
>gi|123204446|gb|ABM73556.1| homeodomain protein [Megalobrama amblycephala]
Length = 392
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Query: 133 LLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRM 188
L N SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRM
Sbjct: 152 LDNGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRM 211
Query: 189 KQKKRI 194
K K++
Sbjct: 212 KHKRQT 217
>gi|224813648|gb|ACN65053.1| homeo box B2a [Megalobrama amblycephala]
Length = 411
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Query: 133 LLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRM 188
L N SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRM
Sbjct: 171 LDNGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRM 230
Query: 189 KQKKRI 194
K K++
Sbjct: 231 KHKRQT 236
>gi|332692480|gb|AEE90161.1| Homeobox A2b [Anguilla anguilla]
gi|385654471|gb|AFI61973.1| Hox-A2b [Anguilla japonica]
Length = 364
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 52/69 (75%), Gaps = 5/69 (7%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K+ + KE
Sbjct: 138 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKE 197
Query: 197 GILIGVGEG 205
+GEG
Sbjct: 198 N---HIGEG 203
>gi|432908473|ref|XP_004077878.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A2b-like
[Oryzias latipes]
Length = 344
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L+E QVK+WFQNRRMK K++
Sbjct: 140 RTAYTNNQLLELEKEFHFNKYLCRPRRVEIAALLDLSEKQVKVWFQNRRMKHKRQ 194
>gi|154183827|gb|ABS70767.1| Hoxa2a [Haplochromis burtoni]
Length = 358
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 140 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 196
>gi|123240|sp|P13544.1|HXD1_CHICK RecName: Full=Homeobox protein Hox-D1; AltName: Full=Homeobox
protein CHOX-1
gi|555451|gb|AAA48820.1| Hox 1, partial [Gallus gallus]
Length = 67
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 53/60 (88%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
S RT+F+ +QLTELEKEFHF++YL+RARR+E+A L+L + QVK+WFQNRRMKQKKR +E
Sbjct: 3 SLRTSFSTRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>gi|400180342|gb|AFP73309.1| Hoxa2beta [Polyodon spathula]
Length = 365
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 12/97 (12%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG------RTNFTNKQLTELEKEFHFNK 158
PTS +T +T L +PP +L+N G RT +TN QL ELEKEFHFNK
Sbjct: 104 PTSSATASST--EPLCFPP----KDSPEILDNVGGGSRRLRTAYTNTQLLELEKEFHFNK 157
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
YL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 158 YLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 194
>gi|24266677|gb|AAN52289.1| Hoxb2a protein [Morone saxatilis]
Length = 445
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 180 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQT 235
>gi|355568480|gb|EHH24761.1| hypothetical protein EGK_08476, partial [Macaca mulatta]
Length = 294
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 129 QHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRM 188
Q L N+S T +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRM
Sbjct: 45 QTSKLKNSSPGTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRM 104
Query: 189 KQKKRIK-EGILIGVGEGSLMGA 210
K KK K +G+ G S G+
Sbjct: 105 KYKKDQKAKGLASSSGGPSPAGS 127
>gi|58396725|gb|AAW72802.1| homeobox protein lab02, partial [Urechis unicinctus]
Length = 48
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 140 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRR 187
TNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ+KIWFQNRR
Sbjct: 1 TNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQIKIWFQNRR 48
>gi|348522885|ref|XP_003448954.1| PREDICTED: homeobox protein Hox-A2a [Oreochromis niloticus]
Length = 363
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|255742442|gb|ACU32556.1| homeobox protein HoxB2 [Callorhinchus milii]
Length = 362
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 4/68 (5%)
Query: 130 HQSLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
H N+SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQN
Sbjct: 128 HSDQDNSSGCRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQN 187
Query: 186 RRMKQKKR 193
RRMK K++
Sbjct: 188 RRMKHKRQ 195
>gi|158702228|gb|ABW77445.1| homeobox protein HoxA2aa [Salmo salar]
Length = 377
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 197
>gi|327280450|ref|XP_003224965.1| PREDICTED: homeobox protein Hox-A2-like isoform 2 [Anolis
carolinensis]
Length = 393
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 158 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 214
>gi|297680786|ref|XP_002818149.1| PREDICTED: homeobox protein Hox-A3 [Pongo abelii]
Length = 443
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKG 254
Query: 198 ILIGVGEGS 206
+L G S
Sbjct: 255 MLTSSGAQS 263
>gi|426228410|ref|XP_004008302.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A3 [Ovis
aries]
Length = 492
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 174 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 230
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 231 ----GKGMLTSSGGQSPS 244
>gi|332692502|gb|AEE90181.1| Homeobox B2b [Anguilla anguilla]
Length = 374
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 8/78 (10%)
Query: 128 SQHQSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIW 182
++ Q+ L+N G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+W
Sbjct: 137 TEAQNGLDNGGSSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVW 196
Query: 183 FQNRRMKQKKRI---KEG 197
FQNRRMK K++ KEG
Sbjct: 197 FQNRRMKHKRQTTHHKEG 214
>gi|301128878|emb|CBL59342.1| HoxA2 [Scyliorhinus canicula]
Length = 363
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 8/88 (9%)
Query: 116 LTALKYPPPAALSQHQS--LLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIE 167
L A P + LSQ ++ + +N+G RT +TN QL ELEKEFHFNKYL R RR+E
Sbjct: 103 LPASSGPAASCLSQKETHEIPDNTGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVE 162
Query: 168 IASVLQLNETQVKIWFQNRRMKQKKRIK 195
IA++L L E QVK+WFQNRRMK K++ +
Sbjct: 163 IAALLDLTERQVKVWFQNRRMKHKRQTQ 190
>gi|195947350|ref|NP_001124326.1| homeobox protein HoxA2aa [Salmo salar]
gi|157816049|gb|ABV82043.1| homeobox protein HoxA2aa [Salmo salar]
Length = 377
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 197
>gi|51094982|gb|EAL24226.1| homeo box A3 [Homo sapiens]
gi|193787636|dbj|BAG52842.1| unnamed protein product [Homo sapiens]
Length = 285
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 37 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 93
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 94 ----GKGMLTSSGGQSPS 107
>gi|219880|dbj|BAA01891.1| homeodomain protein [Homo sapiens]
Length = 416
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 182 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 241
Query: 198 IL 199
IL
Sbjct: 242 IL 243
>gi|194217065|ref|XP_001917673.1| PREDICTED: homeobox protein Hox-B2-like [Equus caballus]
Length = 273
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 148 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 202
>gi|344252747|gb|EGW08851.1| Homeobox protein Hox-A3 [Cricetulus griseus]
Length = 286
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 37 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 93
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 94 ----GKGMLTSSGGQSPS 107
>gi|351713527|gb|EHB16446.1| Homeobox protein Hox-B2 [Heterocephalus glaber]
Length = 353
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|385654497|gb|AFI61995.1| Hox-B2b [Anguilla japonica]
Length = 374
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 8/78 (10%)
Query: 128 SQHQSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIW 182
++ Q+ L+N G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+W
Sbjct: 137 TEAQNGLDNGGSSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVW 196
Query: 183 FQNRRMKQKKRI---KEG 197
FQNRRMK K++ KEG
Sbjct: 197 FQNRRMKHKRQTTHHKEG 214
>gi|47229433|emb|CAF99421.1| unnamed protein product [Tetraodon nigroviridis]
Length = 850
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 628 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 684
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 355 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 412
Query: 198 ILIGVGEGSLMGAQGSSP 215
G G + G SP
Sbjct: 413 -----GAGMMPSPGGQSP 425
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
RT +T +Q ELEKEFHFN+YLTR RR+EIA + L+E Q +
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQKPV 193
>gi|166063962|ref|NP_036713.2| homeobox protein Hox-A2 [Rattus norvegicus]
gi|392356109|ref|XP_003752225.1| PREDICTED: homeobox protein Hox-A2-like [Rattus norvegicus]
gi|149033365|gb|EDL88166.1| homeo box A2 [Rattus norvegicus]
Length = 372
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 120 PACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 179
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 180 ERQVKVWFQNRRMKHKRQTQ 199
>gi|301617255|ref|XP_002938064.1| PREDICTED: homeobox protein Hox-B2a isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 340
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 193
>gi|6754230|ref|NP_034581.1| homeobox protein Hox-A2 [Mus musculus]
gi|399983|sp|P31245.1|HXA2_MOUSE RecName: Full=Homeobox protein Hox-A2; AltName: Full=Homeobox
protein Hox-1.11; Short=Hox1.11
gi|193898|gb|AAA37827.1| homeobox-containing protein [Mus musculus]
gi|193911|gb|AAA37835.1| homeobox protein [Mus musculus]
gi|193913|gb|AAA37836.1| homeobox protein [Mus musculus]
gi|109733225|gb|AAI17108.1| Homeo box A2 [Mus musculus]
gi|109733995|gb|AAI17106.1| Homeo box A2 [Mus musculus]
gi|148666233|gb|EDK98649.1| homeobox A2 [Mus musculus]
Length = 372
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 120 PACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 179
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 180 ERQVKVWFQNRRMKHKRQTQ 199
>gi|432881685|ref|XP_004073901.1| PREDICTED: homeobox protein Hox-A2a isoform 1 [Oryzias latipes]
gi|74267503|dbj|BAE44250.1| hoxA2a [Oryzias latipes]
gi|83016932|dbj|BAE53464.1| hoxA2a [Oryzias latipes]
Length = 359
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 197
>gi|311272694|ref|XP_003133547.1| PREDICTED: homeobox protein Hox-D3 [Sus scrofa]
Length = 432
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|399985|sp|P31246.1|HXA2_RAT RecName: Full=Homeobox protein Hox-A2; AltName: Full=Homeobox
protein Hox-1.11
gi|204642|gb|AAA67846.1| homeobox protein [Rattus norvegicus]
gi|262016|gb|AAB24560.1| Hox 1.11=homeobox transcription factor [rats, aortic smooth
muscles, Peptide, 372 aa]
Length = 372
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 120 PACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 179
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 180 ERQVKVWFQNRRMKHKRQTQ 199
>gi|74144156|dbj|BAE22163.1| unnamed protein product [Mus musculus]
Length = 317
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 65 PACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 124
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 125 ERQVKVWFQNRRMKHKRQTQ 144
>gi|391347175|ref|XP_003747840.1| PREDICTED: uncharacterized protein LOC100898910 [Metaseiulus
occidentalis]
Length = 601
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRM+ K++
Sbjct: 157 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAAALDLTERQVKVWFQNRRMRHKRQT 212
>gi|1147628|gb|AAB48010.1| Cnox5 homeodomain protein [Eleutheria dichotoma]
Length = 259
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 49/58 (84%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R FT KQ+ ELEKEFH+N+YLTRARR+EIA +L+L E Q+KIWFQNRRMKQK+ K+
Sbjct: 144 RVCFTQKQIVELEKEFHYNRYLTRARRVEIAQLLKLTEAQIKIWFQNRRMKQKREQKD 201
>gi|213514452|ref|NP_001135097.1| homeobox protein HoxA2ab [Salmo salar]
gi|157816069|gb|ABV82053.1| homeobox protein HoxA2ab [Salmo salar]
gi|158702248|gb|ABW77455.1| homeobox protein HoxA2ab [Salmo salar]
Length = 373
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 138 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 194
>gi|91982989|gb|ABE68632.1| Cnox-5 [Eleutheria dichotoma]
Length = 259
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 49/58 (84%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R FT KQ+ ELEKEFH+N+YLTRARR+EIA +L+L E Q+KIWFQNRRMKQK+ K+
Sbjct: 144 RVCFTQKQIVELEKEFHYNRYLTRARRVEIAQLLKLTEAQIKIWFQNRRMKQKREQKD 201
>gi|18858825|ref|NP_571181.1| homeobox protein Hox-A2b [Danio rerio]
gi|60392401|sp|O42365.2|HXA2B_DANRE RecName: Full=Homeobox protein Hox-A2b; Short=Hox-A2
gi|11119123|gb|AAG30510.1|AF307010_1 transcription factor Hoxa2 [Danio rerio]
gi|26984643|emb|CAD59108.1| homeo box protein A2b [Danio rerio]
gi|190339418|gb|AAI62328.1| Homeo box A2b [Danio rerio]
Length = 363
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 193
>gi|301617257|ref|XP_002938065.1| PREDICTED: homeobox protein Hox-B2a isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 348
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|301787251|ref|XP_002929041.1| PREDICTED: homeobox protein Hox-D3-like [Ailuropoda melanoleuca]
gi|281349083|gb|EFB24667.1| hypothetical protein PANDA_019124 [Ailuropoda melanoleuca]
Length = 432
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|190339416|gb|AAI62323.1| Homeo box A2b [Danio rerio]
Length = 363
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 193
>gi|297465046|ref|XP_002703632.1| PREDICTED: homeobox protein Hox-D3 [Bos taurus]
gi|297471594|ref|XP_002685351.1| PREDICTED: homeobox protein Hox-D3 [Bos taurus]
gi|296490672|tpg|DAA32785.1| TPA: homeobox D3-like [Bos taurus]
Length = 434
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 200 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 259
Query: 198 IL 199
IL
Sbjct: 260 IL 261
>gi|426238976|ref|XP_004013412.1| PREDICTED: homeobox protein Hox-B2 [Ovis aries]
Length = 277
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 136 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 192
>gi|165873659|gb|ABY67954.1| hox3 protein [Capitella teleta]
Length = 406
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 11/104 (10%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNNS--------GRTNFTNKQLTELEKEFHF 156
P +PS T P+ Y A +Q + S RT +T+ QL ELEKEFHF
Sbjct: 142 PRAPSAQQTPPVAVADY---GAENQSAGVGGQSQVGQPSKRARTAYTSAQLVELEKEFHF 198
Query: 157 NKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILI 200
N+YL R RRIE+A++L L E Q+KIWFQNRRMK KK K+ L+
Sbjct: 199 NRYLCRPRRIEMAALLNLTERQIKIWFQNRRMKYKKDQKQKNLM 242
>gi|301128889|emb|CBL59352.1| HoxB3 [Scyliorhinus canicula]
Length = 394
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +
Sbjct: 156 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKTK 215
Query: 197 GILIGVGEGSLMGA 210
G+L G S G+
Sbjct: 216 GMLSSSGGQSPTGS 229
>gi|148274182|gb|ABF18546.2| homeobox A2x [Fundulus heteroclitus]
Length = 329
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 189
>gi|125489402|gb|ABN42910.1| homeodomain transcription factor Hox3 [Folsomia candida]
gi|125489404|gb|ABN42911.1| homeodomain transcription factor Hox3 [Folsomia candida]
Length = 534
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFH+N+YL R RRIE+AS+L L E Q+KIWFQNRRMK KK +K
Sbjct: 168 ARTAYTSAQLVELEKEFHYNRYLCRPRRIEMASLLSLTERQIKIWFQNRRMKYKKELK 225
>gi|350410204|ref|XP_003488979.1| PREDICTED: hypothetical protein LOC100748643 [Bombus impatiens]
Length = 635
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 31 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 86
>gi|326486617|gb|ADZ76366.1| homeodomain protein HoxA2b [Culter alburnus]
Length = 278
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 111 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 167
>gi|307187179|gb|EFN72419.1| Homeotic protein proboscipedia [Camponotus floridanus]
Length = 654
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 39 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 94
>gi|351713528|gb|EHB16447.1| Homeobox protein Hox-B3 [Heterocephalus glaber]
Length = 426
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 187 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 246
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 247 LASSSGGPSPAGS 259
>gi|220898178|gb|ACL81434.1| HoxA2 [Latimeria menadoensis]
Length = 366
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 77/140 (55%), Gaps = 38/140 (27%)
Query: 92 IPSELSPLGVHPHPTSP--STDYTTPLTALKYPP-------------------------- 123
IPS L+P G HP + P S + ++PL A PP
Sbjct: 56 IPS-LNP-GSHPRHSRPKQSPNGSSPLPAAALPPEYPWMKEKKTSKKNSLPATSSASSTG 113
Query: 124 PAALSQHQS--LLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA +Q +S + + +G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 114 PACFTQKESPEIPDTAGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 173
Query: 176 ETQVKIWFQNRRMKQKKRIK 195
E QVK+WFQNRRMK K++ +
Sbjct: 174 ERQVKVWFQNRRMKHKRQTQ 193
>gi|403258696|ref|XP_003921887.1| PREDICTED: homeobox protein Hox-D3 [Saimiri boliviensis
boliviensis]
Length = 432
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|301128890|emb|CBL59353.1| HoxB2 [Scyliorhinus canicula]
Length = 359
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQAQ 193
>gi|149730755|ref|XP_001500109.1| PREDICTED: homeobox protein Hox-D3 isoform 1 [Equus caballus]
Length = 432
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|74267551|dbj|BAE44274.1| hoxB3b [Oryzias latipes]
gi|83016958|dbj|BAE53483.1| hoxB3b [Oryzias latipes]
Length = 262
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+L + RT +T+ QL ELEKEFHF++YL R RR+E+AS+L LNE Q+KIWFQNRRMKQK
Sbjct: 94 TLASKRTRTAYTSAQLVELEKEFHFSRYLCRPRRVEMASLLNLNERQIKIWFQNRRMKQK 153
Query: 192 K 192
K
Sbjct: 154 K 154
>gi|19923391|ref|NP_008829.3| homeobox protein Hox-D3 [Homo sapiens]
gi|224471887|sp|P31249.3|HXD3_HUMAN RecName: Full=Homeobox protein Hox-D3; AltName: Full=Homeobox
protein Hox-4A
gi|1869799|emb|CAA71102.1| HOXD3 [Homo sapiens]
gi|13477301|gb|AAH05124.1| Homeobox D3 [Homo sapiens]
gi|14250648|gb|AAH08789.1| Homeobox D3 [Homo sapiens]
gi|119631490|gb|EAX11085.1| homeobox D3 [Homo sapiens]
gi|123989966|gb|ABM83900.1| homeobox D3 [synthetic construct]
gi|123999289|gb|ABM87221.1| homeobox D3 [synthetic construct]
gi|208966506|dbj|BAG73267.1| homeobox D3 [synthetic construct]
gi|208968519|dbj|BAG74098.1| homeobox D3 [synthetic construct]
Length = 432
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|94410828|gb|ABF18547.1| homeobox A2x [Fundulus majalis]
Length = 329
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 189
>gi|17223060|gb|AAL36907.1|AF435002_1 labial [Lithobius atkinsoni]
Length = 73
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 52/65 (80%), Gaps = 2/65 (3%)
Query: 155 HFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG-ILIG-VGEGSLMGAQG 212
HFNKYLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+KEG IL+ GS+ +
Sbjct: 1 HFNKYLTRARRIEIATALQLNETQVKIWFQNRRMKQKKRLKEGSILVSEPSAGSVDSSGA 60
Query: 213 SSPNG 217
++P
Sbjct: 61 TTPTS 65
>gi|326486605|gb|ADZ76360.1| homeodomain protein HoxA2b [Mylopharyngodon piceus]
Length = 272
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 105 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 161
>gi|148966922|gb|ABR19892.1| homeobox a2x [Fundulus majalis]
Length = 329
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 189
>gi|432925686|ref|XP_004080728.1| PREDICTED: homeobox protein Hox-D3a-like [Oryzias latipes]
Length = 252
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+L + RT +T+ QL ELEKEFHF++YL R RR+E+AS+L LNE Q+KIWFQNRRMKQK
Sbjct: 84 TLASKRTRTAYTSAQLVELEKEFHFSRYLCRPRRVEMASLLNLNERQIKIWFQNRRMKQK 143
Query: 192 K 192
K
Sbjct: 144 K 144
>gi|426337803|ref|XP_004032886.1| PREDICTED: homeobox protein Hox-D3 [Gorilla gorilla gorilla]
Length = 432
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|224045296|ref|XP_002194899.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Taeniopygia guttata]
Length = 413
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 233
Query: 198 ILIGVGEGSLMGAQGSSP 215
G+G + + G SP
Sbjct: 234 -----GKGMMTSSGGQSP 246
>gi|123204398|gb|ABM73544.1| homeodomain protein [Megalobrama amblycephala]
Length = 360
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 48/57 (84%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK+K++ +
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKRKRQTQ 193
>gi|10140847|ref|NP_006726.1| homeobox protein Hox-A2 [Homo sapiens]
gi|114612520|ref|XP_527697.2| PREDICTED: homeobox protein Hox-A2 [Pan troglodytes]
gi|6016292|sp|O43364.1|HXA2_HUMAN RecName: Full=Homeobox protein Hox-A2; AltName: Full=Homeobox
protein Hox-1K
gi|41350072|gb|AAS00375.1| unknown [Homo sapiens]
gi|51094983|gb|EAL24227.1| homeo box A2 [Homo sapiens]
gi|119614270|gb|EAW93864.1| homeobox A2 [Homo sapiens]
gi|120660272|gb|AAI30572.1| Homeobox A2 [Homo sapiens]
gi|187952389|gb|AAI36501.1| Homeobox A2 [Homo sapiens]
gi|208968493|dbj|BAG74085.1| homeobox A2 [synthetic construct]
gi|410256616|gb|JAA16275.1| homeobox A2 [Pan troglodytes]
Length = 376
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|397489126|ref|XP_003815586.1| PREDICTED: homeobox protein Hox-D3 [Pan paniscus]
Length = 432
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|326486609|gb|ADZ76362.1| homeodomain protein HoxA2b [Hypophthalmichthys molitrix]
Length = 268
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 105 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 161
>gi|5916192|gb|AAD55934.1|AF163858_1 homeoprotein CH-Hox3 [Chaetopterus variopedatus]
Length = 376
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L E Q+KIWFQNRRMK KK K+
Sbjct: 142 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLTERQIKIWFQNRRMKYKKEQKQ- 200
Query: 198 ILIGVGEGSLMG 209
GE SL G
Sbjct: 201 ---KTGEKSLSG 209
>gi|449268330|gb|EMC79199.1| Homeobox protein Hox-A3 [Columba livia]
Length = 413
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 233
Query: 198 ILIGVGEGSLMGAQGSSPN 216
G+G + + G SP+
Sbjct: 234 -----GKGMMTSSGGQSPS 247
>gi|147905886|ref|NP_001079219.1| homeobox A2 [Xenopus laevis]
gi|11119121|gb|AAG30509.1|AF307009_1 transcription factor Hoxa2b [Xenopus laevis]
gi|213623408|gb|AAI69703.1| Transcription factor Hoxa2b [Xenopus laevis]
gi|213625046|gb|AAI69701.1| Transcription factor Hoxa2b [Xenopus laevis]
Length = 375
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|74004892|ref|XP_545539.2| PREDICTED: homeobox protein Hox-D3 [Canis lupus familiaris]
Length = 431
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 197 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 256
Query: 198 IL 199
IL
Sbjct: 257 IL 258
>gi|402899481|ref|XP_003912724.1| PREDICTED: homeobox protein Hox-B3 isoform 1 [Papio anubis]
Length = 433
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 194 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 253
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 254 LASSSGGPSPAGS 266
>gi|395732502|ref|XP_003776074.1| PREDICTED: homeobox protein Hox-D3 [Pongo abelii]
Length = 432
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|344268818|ref|XP_003406253.1| PREDICTED: homeobox protein Hox-D3 [Loxodonta africana]
Length = 430
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 255
Query: 198 IL 199
IL
Sbjct: 256 IL 257
>gi|220898190|gb|ACL81445.1| HoxB2 [Latimeria menadoensis]
Length = 362
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 5/73 (6%)
Query: 128 SQHQSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIW 182
++ Q L +NS RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+W
Sbjct: 126 TEAQGLQDNSNGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVW 185
Query: 183 FQNRRMKQKKRIK 195
FQNRRMK K++ +
Sbjct: 186 FQNRRMKHKRQTQ 198
>gi|148927422|gb|ABR19830.1| homeobox a2x [Fundulus heteroclitus]
Length = 329
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 189
>gi|124054171|gb|ABM89277.1| HOXB3 [Pongo pygmaeus]
Length = 278
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +
Sbjct: 38 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK 97
Query: 197 GILIGVGEGSLMGA 210
G+ G S G+
Sbjct: 98 GLASSSGGPSPAGS 111
>gi|120974230|gb|ABM46660.1| HOXB3 [Gorilla gorilla]
Length = 277
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +
Sbjct: 37 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK 96
Query: 197 GILIGVGEGSLMGA 210
G+ G S G+
Sbjct: 97 GLASSSGGPSPAGS 110
>gi|402899483|ref|XP_003912725.1| PREDICTED: homeobox protein Hox-B3 isoform 2 [Papio anubis]
Length = 469
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 230 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 289
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 290 LASSSGGPSPAGS 302
>gi|74267521|dbj|BAE44259.1| hoxA2b [Oryzias latipes]
gi|83016940|dbj|BAE53470.1| hoxA2b [Oryzias latipes]
Length = 347
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L+E QVK+WFQNRRMK K++
Sbjct: 143 RTAYTNNQLLELEKEFHFNKYLCRPRRVEIAALLDLSEKQVKVWFQNRRMKHKRQ 197
>gi|326921891|ref|XP_003207187.1| PREDICTED: homeobox protein Hox-A3-like [Meleagris gallopavo]
Length = 413
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 233
Query: 198 ILIGVGEGSLMGAQGSSP 215
G+G + + G SP
Sbjct: 234 -----GKGMMTSSGGQSP 246
>gi|340727745|ref|XP_003402197.1| PREDICTED: hypothetical protein LOC100643103 [Bombus terrestris]
Length = 640
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 39 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 94
>gi|301128877|emb|CBL59341.1| HoxA3 [Scyliorhinus canicula]
Length = 413
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +
Sbjct: 174 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 233
Query: 197 GILIGVG 203
G+L G
Sbjct: 234 GMLTSSG 240
>gi|114666356|ref|XP_001173021.1| PREDICTED: homeobox protein Hox-B3 isoform 1 [Pan troglodytes]
gi|410225042|gb|JAA09740.1| homeobox B3 [Pan troglodytes]
gi|410352459|gb|JAA42833.1| homeobox B3 [Pan troglodytes]
Length = 431
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 192 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 251
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 252 LASSSGGPSPAGS 264
>gi|45383083|ref|NP_989879.1| homeobox protein Hox-A3 [Gallus gallus]
gi|363730026|ref|XP_003640749.1| PREDICTED: homeobox protein Hox-A3-like [Gallus gallus]
gi|3201973|gb|AAC19377.1| homeodomain protein HOXD-3 [Gallus gallus]
Length = 413
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 233
Query: 198 ILIGVGEGSLMGAQGSSP 215
G+G + + G SP
Sbjct: 234 -----GKGMMTSSGGQSP 246
>gi|158939061|sp|O93353.2|HXA3_CHICK RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-D3
gi|31339376|dbj|BAC77105.1| homeobox protein Hoxa3 [Gallus gallus]
Length = 413
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 233
Query: 198 ILIGVGEGSLMGAQGSSP 215
G+G + + G SP
Sbjct: 234 -----GKGMMTSSGGQSP 246
>gi|327280446|ref|XP_003224963.1| PREDICTED: homeobox protein Hox-A3-like [Anolis carolinensis]
Length = 429
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 194 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 251
Query: 198 ILIGVGEGSLMGAQGSSPN 216
G+G + + G SP+
Sbjct: 252 -----GKGMMTSSGGQSPS 265
>gi|190576597|gb|ACE79085.1| homeobox A2 (predicted) [Sorex araneus]
Length = 375
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 5/73 (6%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K+ + KE
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKE 205
Query: 197 GILIGVGEGSLMG 209
GEG L G
Sbjct: 206 N---QNGEGKLKG 215
>gi|487337|gb|AAB60683.1| homeobox containing protein [Mus musculus]
gi|1398929|gb|AAC52779.1| Hoxd3 [Mus musculus]
gi|1398931|gb|AAC52780.1| Hoxd3 [Mus musculus]
gi|74210733|dbj|BAE23694.1| unnamed protein product [Mus musculus]
gi|1090526|prf||2019256A Hox-D3 protein
Length = 417
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 183 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 242
Query: 198 IL 199
IL
Sbjct: 243 IL 244
>gi|332242644|ref|XP_003270493.1| PREDICTED: homeobox protein Hox-A2 [Nomascus leucogenys]
Length = 376
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|170649675|gb|ACB21260.1| homeobox A2 (predicted) [Callicebus moloch]
Length = 375
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
>gi|121308831|dbj|BAF43722.1| transcription factor Hox2 [Metacrinus rotundus]
Length = 417
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT FT QL ELEKEFH+NKYL R RRIEIA++L+L E QVK+WFQNRRMKQK+
Sbjct: 144 ARTAFTTTQLLELEKEFHYNKYLCRPRRIEIAAMLELTERQVKVWFQNRRMKQKR 198
>gi|432881687|ref|XP_004073902.1| PREDICTED: homeobox protein Hox-A2a isoform 2 [Oryzias latipes]
Length = 268
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 50 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 106
>gi|395756601|ref|XP_002834342.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3 [Pongo
abelii]
Length = 428
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 189 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 248
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 249 LASSSGGPSPAGS 261
>gi|390463574|ref|XP_002748520.2| PREDICTED: homeobox protein Hox-B3 [Callithrix jacchus]
Length = 301
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +
Sbjct: 61 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK 120
Query: 197 GILIGVGEGSLMGA 210
G+ G S G+
Sbjct: 121 GLASSSGGPSPAGS 134
>gi|124013562|gb|ABM88031.1| HOXB3 [Macaca nemestrina]
Length = 283
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +
Sbjct: 43 ARTAYTSXQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK 102
Query: 197 GILIGVGEGSLMGA 210
G+ G S G+
Sbjct: 103 GLASSSGGPSPAGS 116
>gi|348585687|ref|XP_003478602.1| PREDICTED: homeobox protein Hox-D3-like [Cavia porcellus]
Length = 432
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|355750648|gb|EHH54975.1| hypothetical protein EGM_04093 [Macaca fascicularis]
Length = 422
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|395826612|ref|XP_003786511.1| PREDICTED: homeobox protein Hox-B3 [Otolemur garnettii]
Length = 428
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 189 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 248
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 249 LASSSGGPSPAGS 261
>gi|395532694|ref|XP_003768403.1| PREDICTED: homeobox protein Hox-B2 [Sarcophilus harrisii]
Length = 364
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 149 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 203
>gi|221042614|dbj|BAH12984.1| unnamed protein product [Homo sapiens]
Length = 358
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 119 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 178
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 179 LASSSGGPSPAGS 191
>gi|402888723|ref|XP_003907701.1| PREDICTED: homeobox protein Hox-D3 [Papio anubis]
gi|355564998|gb|EHH21487.1| hypothetical protein EGK_04567 [Macaca mulatta]
Length = 432
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|88604716|gb|ABD46729.1| homeobox protein sex comb reduced [Nymphon gracile]
Length = 274
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE-- 196
RT++T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K+
Sbjct: 193 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKEHKQLP 252
Query: 197 -----GILIGVGEGSLMG 209
+ G+G S++G
Sbjct: 253 GSMSSAQIPGIGPNSILG 270
>gi|14916593|sp|Q9IA21.1|HXA3_HETFR RecName: Full=Homeobox protein Hox-A3
gi|7271830|gb|AAF44641.1|AF224262_3 HoxA3 [Heterodontus francisci]
Length = 410
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +
Sbjct: 171 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 230
Query: 197 GILIGVG 203
G+L G
Sbjct: 231 GMLTSSG 237
>gi|109067089|ref|XP_001092920.1| PREDICTED: homeobox protein Hox-A2 [Macaca mulatta]
Length = 374
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|221042594|dbj|BAH12974.1| unnamed protein product [Homo sapiens]
Length = 299
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +
Sbjct: 59 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK 118
Query: 197 GILIGVGEGSLMGA 210
G+ G S G+
Sbjct: 119 GLASSSGGPSPAGS 132
>gi|184185533|gb|ACC68934.1| homeobox A2 (predicted) [Rhinolophus ferrumequinum]
Length = 373
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
>gi|149705642|ref|XP_001499478.1| PREDICTED: homeobox protein Hox-A2-like [Equus caballus]
Length = 373
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
>gi|402478630|ref|NP_001257967.1| homeobox protein Hox-D3 [Rattus norvegicus]
Length = 432
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|395837221|ref|XP_003791539.1| PREDICTED: homeobox protein Hox-D3 [Otolemur garnettii]
Length = 432
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|351709859|gb|EHB12778.1| Homeobox protein Hox-D3 [Heterocephalus glaber]
Length = 432
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|221045878|dbj|BAH14616.1| unnamed protein product [Homo sapiens]
Length = 358
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 119 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 178
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 179 LASSSGGPSPAGS 191
>gi|397472984|ref|XP_003808007.1| PREDICTED: homeobox protein Hox-A2 [Pan paniscus]
Length = 360
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 131 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 187
>gi|326486619|gb|ADZ76367.1| homeodomain protein HoxA2b [Opsariichthys bidens]
Length = 264
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 106 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 162
>gi|126341825|ref|XP_001362994.1| PREDICTED: homeobox protein Hox-A2 [Monodelphis domestica]
Length = 377
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Query: 125 AALSQHQSL---LNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 176
A L+ +SL N+SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 127 ACLNHKESLEIADNSSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 186
Query: 177 TQVKIWFQNRRMKQKKRIK 195
QVK+WFQNRRMK K++ +
Sbjct: 187 RQVKVWFQNRRMKHKRQTQ 205
>gi|426220825|ref|XP_004004612.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D3 [Ovis
aries]
Length = 421
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 258
Query: 198 IL 199
IL
Sbjct: 259 IL 260
>gi|410952518|ref|XP_003982926.1| PREDICTED: homeobox protein Hox-A2 [Felis catus]
Length = 376
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|297680796|ref|XP_002818153.1| PREDICTED: homeobox protein Hox-A2 [Pongo abelii]
Length = 374
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|301754121|ref|XP_002912902.1| PREDICTED: homeobox protein Hox-A2-like [Ailuropoda melanoleuca]
gi|281349543|gb|EFB25127.1| hypothetical protein PANDA_000663 [Ailuropoda melanoleuca]
Length = 376
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|114581897|ref|XP_001153177.1| PREDICTED: homeobox protein Hox-D3 [Pan troglodytes]
Length = 433
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 258
Query: 198 IL 199
IL
Sbjct: 259 IL 260
>gi|327263947|ref|XP_003216778.1| PREDICTED: homeobox protein Hox-D3a-like [Anolis carolinensis]
Length = 346
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A +L+L+E Q+KIWFQNRRMK KK I+
Sbjct: 132 RTAYTHTQLVELEKEFHFNRYLCRPRRLEMARLLRLSERQIKIWFQNRRMKYKKDIRS-- 189
Query: 199 LIGVGEGSLMGAQGSSPNGGLY 220
+G++ + SP +Y
Sbjct: 190 ----AKGTIKKSPNQSPQVNIY 207
>gi|149642727|ref|NP_001092644.1| homeobox protein Hox-B3 [Bos taurus]
gi|148745430|gb|AAI42500.1| HOXB3 protein [Bos taurus]
gi|296476505|tpg|DAA18620.1| TPA: homeobox B3 [Bos taurus]
Length = 426
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 187 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 246
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 247 LASSSGGPSPAGS 259
>gi|126341821|ref|XP_001362823.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Monodelphis
domestica]
Length = 455
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 217 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 274
Query: 198 ILIGVGEGSLMGAQGSSPN 216
G+G + + G SP+
Sbjct: 275 -----GKGMMTSSGGQSPS 288
>gi|148223968|ref|NP_001083876.1| homeobox A2 [Xenopus laevis]
gi|11119119|gb|AAG30508.1|AF307008_1 transcription factor Hoxa2 [Xenopus laevis]
gi|114108099|gb|AAI23245.1| Hoxa2 protein [Xenopus laevis]
Length = 369
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 142 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 198
>gi|307213521|gb|EFN88930.1| Homeotic protein antennapedia [Harpegnathos saltator]
Length = 236
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 104 HPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRA 163
HP+S TP+ AA HQ GR +T Q ELEKEFHFN+YLTR
Sbjct: 131 HPSS------TPIVYASCKLQAAAVDHQE--RKRGRQTYTRYQTLELEKEFHFNRYLTRR 182
Query: 164 RRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGSLMGAQGSSPNG 217
RRIEIA L L E Q+KIWFQNRRMK KK K G G+G + +SP G
Sbjct: 183 RRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGDGDTEISPQTSPQG 236
>gi|395830938|ref|XP_003788569.1| PREDICTED: homeobox protein Hox-A2 [Otolemur garnettii]
gi|202070724|gb|ACH95312.1| homeobox A2 (predicted) [Otolemur garnettii]
Length = 372
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 143 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 199
>gi|296209387|ref|XP_002751500.1| PREDICTED: homeobox protein Hox-A2 [Callithrix jacchus]
gi|189044222|sp|B0VXK3.1|HXA2_CALJA RecName: Full=Homeobox protein Hox-A2
gi|167427225|gb|ABZ80206.1| homeobox A2 (predicted) [Callithrix jacchus]
Length = 375
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
>gi|84570137|ref|NP_002137.4| homeobox protein Hox-B3 [Homo sapiens]
gi|215274007|sp|P14651.2|HXB3_HUMAN RecName: Full=Homeobox protein Hox-B3; AltName: Full=Homeobox
protein Hox-2.7; AltName: Full=Homeobox protein Hox-2G
gi|158255800|dbj|BAF83871.1| unnamed protein product [Homo sapiens]
gi|189054741|dbj|BAG37563.1| unnamed protein product [Homo sapiens]
gi|208966498|dbj|BAG73263.1| homeobox B3 [synthetic construct]
gi|225000020|gb|AAI72242.1| Homeobox B3 [synthetic construct]
gi|225000910|gb|AAI72550.1| Homeobox B3 [synthetic construct]
Length = 431
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 192 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 251
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 252 LASSSGGPSPAGS 264
>gi|13359293|dbj|BAB33375.1| homeobox B3 [Mesocricetus auratus]
Length = 424
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 190 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 249
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 250 LASSSGGPSPAGS 262
>gi|332209407|ref|XP_003253803.1| PREDICTED: homeobox protein Hox-D3 [Nomascus leucogenys]
Length = 442
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 208 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 267
Query: 198 IL 199
IL
Sbjct: 268 IL 269
>gi|259053111|emb|CAX11342.1| Hox3 protein [Parasteatoda tepidariorum]
Length = 606
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RRIE+AS+L L E Q+KIWFQNRRMK KK K +
Sbjct: 236 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMASLLNLTERQIKIWFQNRRMKYKKEQKSK 295
Query: 197 GILIGVGEGSLMGAQGSSP 215
GI + + GS P
Sbjct: 296 GIFCQAVDKETPCSGGSLP 314
>gi|193786576|dbj|BAG51359.1| unnamed protein product [Homo sapiens]
Length = 431
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 192 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 251
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 252 LASSSGGPSPAGS 264
>gi|11138935|gb|AAG31555.1|AF287967_5 homeobox B3 [Homo sapiens]
gi|32380|emb|CAA34657.1| unnamed protein product [Homo sapiens]
gi|119615145|gb|EAW94739.1| homeobox B3, isoform CRA_a [Homo sapiens]
gi|119615146|gb|EAW94740.1| homeobox B3, isoform CRA_a [Homo sapiens]
gi|119615147|gb|EAW94741.1| homeobox B3, isoform CRA_a [Homo sapiens]
Length = 431
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 192 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 251
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 252 LASSSGGPSPAGS 264
>gi|327283055|ref|XP_003226257.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D3-like
[Anolis carolinensis]
Length = 445
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 210 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 269
Query: 198 IL 199
IL
Sbjct: 270 IL 271
>gi|426227778|ref|XP_004007992.1| PREDICTED: homeobox protein Hox-A2 [Ovis aries]
Length = 362
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 133 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 189
>gi|157823960|ref|NP_001100512.1| homeo box B3 [Rattus norvegicus]
gi|149053988|gb|EDM05805.1| homeo box B3 (predicted) [Rattus norvegicus]
Length = 429
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 191 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 250
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 251 LASSSGGPSPAGS 263
>gi|348564402|ref|XP_003467994.1| PREDICTED: homeobox protein Hox-A2-like [Cavia porcellus]
Length = 375
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 202
>gi|332692462|gb|AEE90145.1| Homeobox A3a, partial [Anguilla anguilla]
gi|385654462|gb|AFI61965.1| Hox-A3a, partial [Anguilla japonica]
Length = 258
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 18 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 75
Query: 198 ILIGVGEGSLMGAQ 211
GVG GAQ
Sbjct: 76 ---GVGMMPSPGAQ 86
>gi|431909011|gb|ELK12602.1| Homeobox protein Hox-A2 [Pteropus alecto]
Length = 373
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
>gi|126517502|ref|NP_034598.2| homeobox protein Hox-D3 [Mus musculus]
gi|224471899|sp|P09027.4|HXD3_MOUSE RecName: Full=Homeobox protein Hox-D3; AltName: Full=Homeobox
protein Hox-4.1; AltName: Full=Homeobox protein MH-19
gi|74227447|dbj|BAE21791.1| unnamed protein product [Mus musculus]
gi|148695232|gb|EDL27179.1| homeobox D3, isoform CRA_b [Mus musculus]
gi|187950755|gb|AAI37719.1| Homeo box D3 [Mus musculus]
gi|223459826|gb|AAI37717.1| Homeo box D3 [Mus musculus]
Length = 433
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 258
Query: 198 IL 199
IL
Sbjct: 259 IL 260
>gi|357617807|gb|EHJ71004.1| maxillopedia [Danaus plexippus]
Length = 548
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 59 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 114
>gi|397515036|ref|XP_003827770.1| PREDICTED: homeobox protein Hox-B3 [Pan paniscus]
Length = 400
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 161 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 220
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 221 LASSSGGPSPAGS 233
>gi|156181762|gb|ABU55073.1| Hoxb2a [Oreochromis niloticus]
Length = 180
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 93 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 147
>gi|73976163|ref|XP_851905.1| PREDICTED: homeobox protein Hox-A2 isoform 1 [Canis lupus
familiaris]
Length = 374
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|326486607|gb|ADZ76361.1| homeodomain protein HoxA2b [Ctenopharyngodon idella]
Length = 209
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 42 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 98
>gi|313236407|emb|CBY11724.1| unnamed protein product [Oikopleura dioica]
Length = 231
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +TN QL ELEKEFHFNKYL R RRIEIAS+L L E QVK+WFQNRRMK K+
Sbjct: 13 RTAYTNTQLIELEKEFHFNKYLCRPRRIEIASMLDLTERQVKVWFQNRRMKYKR 66
>gi|359754084|gb|AEV59507.1| HOXA3 [Macropus eugenii]
Length = 438
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 200 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 257
Query: 198 ILIGVGEGSLMGAQGSSPN 216
G+G + + G SP+
Sbjct: 258 -----GKGMMTSSGGQSPS 271
>gi|520610|emb|CAA84515.1| Hox-2 homeodomain protein [Branchiostoma floridae]
gi|745775|prf||2016458B Hox-2 gene
Length = 114
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG- 197
RT FTN QL ELEKEFH+NKY+ + RR EIAS L LNE QVKIWFQNRRM+QK+R +G
Sbjct: 19 RTVFTNTQLLELEKEFHYNKYVCKPRRKEIASYLDLNERQVKIWFQNRRMRQKRRDTKGR 78
Query: 198 ILIGVGEGSLM------GAQGSSPNGG 218
IG G+ A+ SP GG
Sbjct: 79 SEIGTDPGTAAEPADGGRAEEGSPGGG 105
>gi|73913460|gb|AAZ91665.1| HoxA2a [Morone saxatilis]
Length = 179
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 124 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 178
>gi|249224|gb|AAA08719.1| homeobox containing protein [Mus musculus]
gi|312230|emb|CAA46951.1| Hox-2.7 [Mus musculus]
Length = 433
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 254
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 255 LASSSGGPSPAGS 267
>gi|187469094|gb|AAI66859.1| Hoxb3 protein [Rattus norvegicus]
Length = 428
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 190 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 249
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 250 LASSSGGPSPAGS 262
>gi|332692501|gb|AEE90180.1| Homeobox B3b [Anguilla anguilla]
Length = 411
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK-- 233
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
L G+G S G SP G
Sbjct: 234 -LKGMGSPS----GGPSPTG 248
>gi|48476635|gb|AAT44520.1| proboscipedia [Oncopeltus fasciatus]
Length = 470
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 13 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 68
>gi|66476104|gb|AAX63749.2| HoxA2bi [Oncorhynchus mykiss]
Length = 302
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 122 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLNLTERQVKVWFQNRRMKHKRQT 177
>gi|291405873|ref|XP_002719361.1| PREDICTED: homeobox B3 [Oryctolagus cuniculus]
Length = 434
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 191 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 250
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 251 LASSSGGPSPAGS 263
>gi|395540364|ref|XP_003772125.1| PREDICTED: homeobox protein Hox-A3 [Sarcophilus harrisii]
Length = 443
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 205 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 262
Query: 198 ILIGVGEGSLMGAQGSSPN 216
G+G + + G SP+
Sbjct: 263 -----GKGMMTSSGGQSPS 276
>gi|385654496|gb|AFI61994.1| Hox-B3b [Anguilla japonica]
Length = 411
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK-- 233
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
L G+G S G SP G
Sbjct: 234 -LKGMGSPS----GGPSPTG 248
>gi|220898204|gb|ACL81458.1| HoxC3 [Latimeria menadoensis]
Length = 391
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 166 ARTAYTNAQLVELEKEFHFNRYLCRPRRVEMANILNLSERQIKIWFQNRRMKYKKDHK 223
>gi|148695231|gb|EDL27178.1| homeobox D3, isoform CRA_a [Mus musculus]
Length = 273
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 39 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 98
Query: 198 IL 199
IL
Sbjct: 99 IL 100
>gi|6110592|gb|AAF03888.1|AF187068_1 proboscipedia ortholog [Tribolium castaneum]
Length = 477
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%)
Query: 128 SQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRR 187
SQ ++ L RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRR
Sbjct: 128 SQQENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRR 187
Query: 188 MKQKKR 193
MK K++
Sbjct: 188 MKHKRQ 193
>gi|120300900|ref|NP_001073338.1| homeobox protein Hox-B3 [Mus musculus]
gi|120300925|ref|NP_034588.2| homeobox protein Hox-B3 [Mus musculus]
gi|1708353|sp|P09026.4|HXB3_MOUSE RecName: Full=Homeobox protein Hox-B3; AltName: Full=Homeobox
protein Hox-2.7; AltName: Full=Homeobox protein MH-23
gi|466269|gb|AAB60496.1| homeobox containing protein [Mus musculus]
gi|148684084|gb|EDL16031.1| homeobox B3 [Mus musculus]
gi|225000324|gb|AAI72606.1| Homeo box B3 [synthetic construct]
Length = 433
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 254
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 255 LASSSGGPSPAGS 267
>gi|403288099|ref|XP_003935252.1| PREDICTED: homeobox protein Hox-A2 [Saimiri boliviensis
boliviensis]
Length = 376
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 203
>gi|195344053|ref|XP_002038605.1| GM10530 [Drosophila sechellia]
gi|194133626|gb|EDW55142.1| GM10530 [Drosophila sechellia]
Length = 833
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 249 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 303
>gi|1398927|gb|AAC52778.1| Hoxa3, partial [Mus musculus]
Length = 227
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 142 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 199
Query: 198 ILIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 200 -----GKGMLTSSGGQSPS 213
>gi|28629643|gb|AAO43027.1| HoxB2 [Latimeria menadoensis]
Length = 271
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 51 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 107
>gi|194217067|ref|XP_001499216.2| PREDICTED: homeobox protein Hox-B3-like [Equus caballus]
Length = 288
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S + RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK K
Sbjct: 42 SAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYK 101
Query: 192 KRIK-EGILIGVGEGSLMGA 210
K K +G+ G S G+
Sbjct: 102 KDQKAKGLASSSGGPSPAGS 121
>gi|432881683|ref|XP_004073900.1| PREDICTED: homeobox protein Hox-A3a-like [Oryzias latipes]
gi|74267505|dbj|BAE44251.1| hoxA3a [Oryzias latipes]
gi|83016931|dbj|BAE53463.1| hoxA3a [Oryzias latipes]
Length = 416
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 171 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 228
Query: 198 ILIGVGEGSLMGAQ 211
GVG S G Q
Sbjct: 229 ---GVGMMSSPGGQ 239
>gi|354479681|ref|XP_003502038.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A2-like
[Cricetulus griseus]
Length = 345
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 116 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 172
>gi|355747757|gb|EHH52254.1| Homeobox protein Hox-1K [Macaca fascicularis]
Length = 377
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 148 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 204
>gi|351704292|gb|EHB07211.1| Homeobox protein Hox-A2 [Heterocephalus glaber]
Length = 352
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 123 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 179
>gi|255742438|gb|ACU32553.1| homeobox protein HoxA2 [Callorhinchus milii]
Length = 363
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 134 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 190
>gi|195498941|ref|XP_002096738.1| GE25834 [Drosophila yakuba]
gi|194182839|gb|EDW96450.1| GE25834 [Drosophila yakuba]
Length = 784
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 197 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 251
>gi|194899125|ref|XP_001979113.1| GG10269 [Drosophila erecta]
gi|190650816|gb|EDV48071.1| GG10269 [Drosophila erecta]
Length = 811
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 226 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 280
>gi|348533888|ref|XP_003454436.1| PREDICTED: homeobox protein Hox-A2b isoform 2 [Oreochromis
niloticus]
Length = 355
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 200
>gi|326921911|ref|XP_003207197.1| PREDICTED: homeobox protein Hox-A2-like [Meleagris gallopavo]
Length = 296
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 65 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 121
>gi|220898179|gb|ACL81435.1| HoxA3 [Latimeria menadoensis]
Length = 411
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 172 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 229
Query: 198 ILIGVGEGSLMGAQGSSPN 216
G+G + + G SP+
Sbjct: 230 -----GKGMMTPSGGQSPS 243
>gi|359754093|gb|AEV59516.1| HOXA2 [Macropus eugenii]
Length = 373
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Query: 125 AALSQHQSLL---NNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 176
A L+ +SL N+SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 129 ACLNHKESLEIADNSSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 188
Query: 177 TQVKIWFQNRRMKQKKRIK 195
QVK+WFQNRRMK K++ +
Sbjct: 189 RQVKVWFQNRRMKHKRQTQ 207
>gi|348533886|ref|XP_003454435.1| PREDICTED: homeobox protein Hox-A2b isoform 1 [Oreochromis
niloticus]
Length = 362
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 153 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 207
>gi|14010239|gb|AAK51912.1|AF361328_1 Hox3 [Folsomia candida]
Length = 225
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFH+N+YL R RRIE+AS+L L E Q+KIWFQNRRMK KK +K
Sbjct: 9 ARTAYTSAQLVELEKEFHYNRYLCRPRRIEMASLLSLTERQIKIWFQNRRMKYKKELK 66
>gi|254212179|gb|ACT65754.1| Hoxa3 [Leucoraja erinacea]
Length = 411
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +
Sbjct: 172 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 231
Query: 197 GILIGVG 203
G+L G
Sbjct: 232 GMLTSSG 238
>gi|195963311|ref|NP_001124328.1| homeobox protein Hox-A2b [Salmo salar]
gi|157816079|gb|ABV82058.1| homeobox protein HoxA2b [Salmo salar]
gi|158702258|gb|ABW77460.1| homeobox protein HoxA2b [Salmo salar]
Length = 357
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLNLTERQVKVWFQNRRMKHKRQT 192
>gi|7599|emb|CAA45272.1| proboscipedia [Drosophila melanogaster]
gi|8376|emb|CAA45271.1| proboscipedia [Drosophila melanogaster]
gi|248601|gb|AAA08526.1| proboscipedia [Drosophila melanogaster]
Length = 798
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 202 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 256
>gi|255742437|gb|ACU32552.1| homeobox protein HoxA3 [Callorhinchus milii]
Length = 409
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +
Sbjct: 170 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 229
Query: 197 GILIGVG 203
G+L G
Sbjct: 230 GMLTSSG 236
>gi|156181758|gb|ABU55071.1| Hoxa2a, partial [Oreochromis niloticus]
Length = 179
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 124 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 178
>gi|71897468|gb|AAZ52558.1| transcription factor Hoxb2 [Xenopus laevis]
Length = 165
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 50 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 106
>gi|70569907|dbj|BAE06500.1| transcription factor protein [Ciona intestinalis]
Length = 733
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHF+ YL R RRIE+A L L E Q+KIWFQNRRMK KK K+
Sbjct: 371 RTAYTNSQLVELEKEFHFSHYLCRPRRIELAQGLGLTERQIKIWFQNRRMKFKKEQKQKA 430
Query: 199 LIGVGEG-SLMGAQG 212
++ G S+MGA G
Sbjct: 431 VLQRNNGDSVMGAHG 445
>gi|313244923|emb|CBY42438.1| unnamed protein product [Oikopleura dioica]
Length = 171
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +TN QL ELEKEFHFNKYL R RRIEIAS+L L E QVK+WFQNRRMK K+
Sbjct: 34 RTAYTNTQLIELEKEFHFNKYLCRPRRIEIASMLDLTERQVKVWFQNRRMKYKR 87
>gi|387230985|gb|AFJ72203.1| homeobox A2, partial [Myotis laniger]
Length = 236
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 10 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 66
>gi|269931711|gb|ACZ54375.1| homeobox A3 [Monodelphis domestica]
Length = 150
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 7 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 64
Query: 198 ILIGVGEGSLMGAQGSSPN 216
G+G + + G SP+
Sbjct: 65 -----GKGMMTSSGGQSPS 78
>gi|74096089|ref|NP_001027669.1| homeoprotein 3 [Ciona intestinalis]
gi|4583562|emb|CAB40561.1| homeoprotein [Ciona intestinalis]
Length = 733
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +TN QL ELEKEFHF+ YL R RRIE+A L L E Q+KIWFQNRRMK KK K+
Sbjct: 371 RTAYTNSQLVELEKEFHFSHYLCRPRRIELAQGLGLTERQIKIWFQNRRMKFKKEQKQKA 430
Query: 199 LIGVGEG-SLMGAQG 212
++ G S+MGA G
Sbjct: 431 VLQRNNGDSVMGAHG 445
>gi|313253|emb|CAA51975.1| homeobox containing protein [Mus musculus]
Length = 411
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 183 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 242
Query: 198 IL 199
IL
Sbjct: 243 IL 244
>gi|327275881|ref|XP_003222700.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B2-like
[Anolis carolinensis]
Length = 376
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 168 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 224
>gi|224045294|ref|XP_002194938.1| PREDICTED: homeobox protein Hox-A2 [Taeniopygia guttata]
Length = 378
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
>gi|335371121|gb|AEH57089.1| Hox4 [Bugula neritina]
Length = 233
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 75/135 (55%), Gaps = 20/135 (14%)
Query: 79 FPVKG-EIGVTKVQIPSELSPL---GVHPH-PTSPSTDYTTPLTALK------YPPPAAL 127
+P+ G + + + IPS PL HP P++P+ + + TA YP L
Sbjct: 72 YPLHGLRMDYSNLAIPSYQPPLPHSTSHPETPSTPTNENDSTFTASTNSAVQIYPWMKKL 131
Query: 128 SQHQSLLNNS-------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
H S N+ RT +T Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+K
Sbjct: 132 --HVSSSNDPDGMDPKRARTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLDLSERQIK 189
Query: 181 IWFQNRRMKQKKRIK 195
IWFQNRRMK KK K
Sbjct: 190 IWFQNRRMKWKKEHK 204
>gi|284005055|ref|NP_001164869.1| homeobox protein Hox-A2 [Oryctolagus cuniculus]
gi|217418305|gb|ACK44307.1| homeobox A2 (predicted) [Oryctolagus cuniculus]
Length = 374
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRRRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|226446765|gb|ACO58662.1| homeobox a2b [Oreochromis niloticus]
Length = 362
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 153 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 207
>gi|198429593|ref|XP_002122113.1| PREDICTED: homeobox transcription factor hox2 [Ciona intestinalis]
Length = 638
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFH+NKYL R RRIEIA++L L E QVK+WFQNRRMK K++
Sbjct: 246 RTAYTNTQLLELEKEFHYNKYLCRPRRIEIATLLDLTERQVKVWFQNRRMKHKRQ 300
>gi|348533890|ref|XP_003454437.1| PREDICTED: homeobox protein Hox-A2b isoform 3 [Oreochromis
niloticus]
Length = 356
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 201
>gi|326486613|gb|ADZ76364.1| homeodomain protein HoxA2b [Elopichthys bambusa]
Length = 239
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 104 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 160
>gi|118093551|ref|XP_428765.2| PREDICTED: homeobox protein Hox-D3 [Gallus gallus]
Length = 413
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 182 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 241
Query: 198 IL 199
I+
Sbjct: 242 IM 243
>gi|167234210|ref|NP_001107807.1| maxillopedia [Tribolium castaneum]
gi|270002809|gb|EEZ99256.1| proboscipedia [Tribolium castaneum]
Length = 654
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 139 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 194
>gi|46048762|ref|NP_990481.1| homeobox protein Hox-A2 [Gallus gallus]
gi|585280|sp|Q08727.1|HXA2_CHICK RecName: Full=Homeobox protein Hox-A2
gi|415800|emb|CAA52370.1| Hoxa2 protein [Gallus gallus]
Length = 375
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 200
>gi|332024150|gb|EGI64366.1| Homeotic protein antennapedia [Acromyrmex echinatior]
Length = 352
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 52/80 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 273 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 332
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
G G+G + +SP G
Sbjct: 333 GEPGSGDGDTEISPQTSPQG 352
>gi|326486615|gb|ADZ76365.1| homeodomain protein HoxA2b [Xenocypris argentea]
Length = 240
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 111 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 167
>gi|62958631|gb|AAY23644.1| Hox protein [Oreochromis niloticus]
Length = 206
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQT 71
>gi|355695010|gb|AER99864.1| homeobox B2 [Mustela putorius furo]
Length = 169
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 86 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 142
>gi|58585092|ref|NP_001011571.1| homeobox protein H90 [Apis mellifera]
gi|9967824|emb|CAC06383.1| Antennapedia protein [Apis mellifera]
Length = 352
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 52/80 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 273 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 332
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
G G+G + +SP G
Sbjct: 333 GTPGSGDGDTEISPQTSPQG 352
>gi|387230993|gb|AFJ72207.1| homeobox A2, partial [Balaenoptera physalus]
Length = 237
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 72
>gi|410905341|ref|XP_003966150.1| PREDICTED: homeobox protein Hox-A2b-like [Takifugu rubripes]
Length = 349
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 195
>gi|156181760|gb|ABU55072.1| Hoxa2b, partial [Oreochromis niloticus]
Length = 213
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 128 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 182
>gi|405967560|gb|EKC32708.1| Homeobox protein Hox-A2 [Crassostrea gigas]
Length = 594
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++ +
Sbjct: 64 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKYKRQTQ 120
>gi|386783917|gb|AFJ24853.1| hypothetical protein, partial [Schmidtea mediterranea]
Length = 193
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFNKYLTR RRIEIA LQL+E QVKIWFQNRRMK KK
Sbjct: 70 NRTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQVKIWFQNRRMKWKK 124
>gi|154183800|gb|ABS70742.1| Hoxa2b [Haplochromis burtoni]
Length = 362
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 153 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 207
>gi|156387522|ref|XP_001634252.1| predicted protein [Nematostella vectensis]
gi|156221333|gb|EDO42189.1| predicted protein [Nematostella vectensis]
Length = 264
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R FT +QL ELEKEFHF+KYLTR RRIEIA+ L+L E Q+KIWFQNRRMK K+ K+ +
Sbjct: 157 RFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKIWFQNRRMKWKREFKDSL 216
>gi|326486611|gb|ADZ76363.1| homeodomain protein HoxA2b [Squaliobarbus curriculus]
Length = 219
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 92 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 148
>gi|380014422|ref|XP_003691231.1| PREDICTED: homeotic protein antennapedia-like [Apis florea]
Length = 350
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 52/80 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 271 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 330
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
G G+G + +SP G
Sbjct: 331 GTPGSGDGDTEISPQTSPQG 350
>gi|355694992|gb|AER99857.1| homeobox A2 [Mustela putorius furo]
Length = 242
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 14 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 70
>gi|387230979|gb|AFJ72200.1| homeobox A2, partial [Hipposideros armiger]
gi|387230981|gb|AFJ72201.1| homeobox A2, partial [Taphozous melanopogon]
gi|387230987|gb|AFJ72204.1| homeobox A2, partial [Aselliscus stoliczkanus]
Length = 245
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 72
>gi|109944934|dbj|BAE96995.1| Antennapedia [Moina macrocopa]
Length = 528
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 49/71 (69%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 450 GRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKAK 509
Query: 198 ILIGVGEGSLM 208
+ G EG L+
Sbjct: 510 LDAGCLEGLLV 520
>gi|387230989|gb|AFJ72205.1| homeobox A2, partial [Rhinolophus pusillus]
Length = 245
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 72
>gi|387230983|gb|AFJ72202.1| homeobox A2, partial [Chaerephon plicatus]
Length = 245
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 72
>gi|217035823|gb|ACJ74381.1| Hox2 [Branchiostoma lanceolatum]
Length = 204
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT FTN QL ELEKEFH+NKY+ + RR EIAS L LNE QVKIWFQNRRM+QK+R
Sbjct: 109 RTVFTNTQLLELEKEFHYNKYVCKPRRKEIASFLDLNERQVKIWFQNRRMRQKRR 163
>gi|307178555|gb|EFN67244.1| Homeotic protein antennapedia [Camponotus floridanus]
Length = 353
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 52/80 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 274 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 333
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
G G+G + +SP G
Sbjct: 334 GEPGSGDGDTEISPQTSPQG 353
>gi|344270556|ref|XP_003407110.1| PREDICTED: homeobox protein Hox-A2-like [Loxodonta africana]
Length = 375
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA +L L E QVK+WFQNRRMK K++ +
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAGLLDLTERQVKVWFQNRRMKHKRQTQ 201
>gi|340727738|ref|XP_003402194.1| PREDICTED: homeotic protein antennapedia [Bombus terrestris]
gi|325305997|gb|ADZ11103.1| antennapedia-like protein [Bombus terrestris]
Length = 352
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 52/80 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 273 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 332
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
G G+G + +SP G
Sbjct: 333 GEPGSGDGDTEISPQTSPQG 352
>gi|444713453|gb|ELW54352.1| Homeobox protein Hox-A2 [Tupaia chinensis]
Length = 278
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 49 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 105
>gi|383849605|ref|XP_003700435.1| PREDICTED: homeotic protein antennapedia-like [Megachile rotundata]
Length = 352
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 52/80 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 273 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 332
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
G G+G + +SP G
Sbjct: 333 GEPGSGDGDTEISPQTSPQG 352
>gi|387230991|gb|AFJ72206.1| homeobox A2, partial [Neophocaena phocaenoides]
Length = 231
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 9 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 65
>gi|410952542|ref|XP_003982938.1| PREDICTED: homeobox protein Hox-A4 [Felis catus]
Length = 385
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 284 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 337
>gi|400180341|gb|AFP73308.1| Hoxa3beta [Polyodon spathula]
Length = 413
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 7/84 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 172 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLSLTERQIKIWFQNRRMKYKKDQK-- 229
Query: 198 ILIGVGEGSLMGAQGSSPNGGLYR 221
G+G + G SP +++
Sbjct: 230 -----GKGMMPSPGGQSPGSPVHQ 248
>gi|15450327|gb|AAK96033.1| homeodomain transcription factor Maxillopedia [Tribolium castaneum]
Length = 523
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 8 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 63
>gi|119370771|sp|Q1KKZ2.1|HXA2B_FUGRU RecName: Full=Homeobox protein Hox-A2b
gi|94482783|gb|ABF22402.1| homeobox protein HoxA2b [Takifugu rubripes]
Length = 300
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 92 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKRQ 146
>gi|274317370|ref|NP_001069602.2| homeobox protein Hox-A4 [Bos taurus]
gi|296488417|tpg|DAA30530.1| TPA: homeobox A4 isoform 1 [Bos taurus]
Length = 319
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK K
Sbjct: 218 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 274
>gi|15425738|dbj|BAB64346.1| homeotic protein [Daphnia magna]
gi|109944917|dbj|BAE96985.1| Antennapedia [Daphnia magna]
gi|109944921|dbj|BAE96987.1| Antennapedia [Daphnia magna]
gi|109944923|dbj|BAE96988.1| Antennapedia [Daphnia magna]
gi|109944925|dbj|BAE96989.1| Antennapedia [Daphnia magna]
gi|109944928|dbj|BAE96991.1| Antennapedia [Daphnia magna]
gi|109944931|dbj|BAE96993.1| Antennapedia [Daphnia magna]
Length = 627
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 61/109 (55%), Gaps = 12/109 (11%)
Query: 110 TDYTTPLTALKYPPPAALSQHQSLL----------NNSGRTNFTNKQLTELEKEFHFNKY 159
+D+ PL PP +L H S L GR +T Q ELEKEFHFN+Y
Sbjct: 513 SDHIPPLDMDGESPPGSL--HDSPLYPWMRSQFAERKRGRQTYTRFQTLELEKEFHFNRY 570
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGSLM 208
LTR RRIEIA L L E Q+KIWFQNRRMK KK K + G EG L+
Sbjct: 571 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKAKLDAGCLEGLLV 619
>gi|444723479|gb|ELW64134.1| Homeobox protein Hox-D3 [Tupaia chinensis]
Length = 282
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
IL
Sbjct: 258 IL 259
>gi|350405515|ref|XP_003487458.1| PREDICTED: homeotic protein antennapedia-like [Bombus impatiens]
Length = 351
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K G
Sbjct: 273 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKXG 332
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
G G+G + +SP G
Sbjct: 333 -EPGSGDGDTEISPQTSPQG 351
>gi|4760768|dbj|BAA77403.1| PLOX3-Dj [Dugesia japonica]
Length = 363
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFNKYLTR RRIEIA LQL+E QVKIWFQNRRMK KK
Sbjct: 240 NRTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQVKIWFQNRRMKWKK 294
>gi|15823114|dbj|BAB68708.1| homeobox protein [Mus musculus]
gi|15823116|dbj|BAB68709.1| homeobox protein [Mus musculus]
gi|15823118|dbj|BAB68710.1| homeobox protein [Mus musculus musculus]
gi|15823120|dbj|BAB68711.1| homeobox protein [Mus musculus]
gi|15823122|dbj|BAB68712.1| homeobox protein [Mus musculus]
gi|15823124|dbj|BAB68713.1| homeobox protein [Mus musculus]
gi|15823126|dbj|BAB68714.1| homeobox protein [Mus musculus]
gi|15823128|dbj|BAB68715.1| homeobox protein [Mus musculus]
gi|15823132|dbj|BAB68717.1| homeobox protein [Mus spicilegus]
Length = 246
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 17 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 73
>gi|332692513|gb|AEE90190.1| Homeobox C5a [Anguilla anguilla]
gi|385654506|gb|AFI62003.1| Hox-C5a [Anguilla japonica]
Length = 250
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 82 KGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTN 141
K G KV + P+ + P T++ P YP L RT+
Sbjct: 121 KARTGEIKVGAMQPVQPVRQPNNSAQPQTNHQQPQI---YPWMTKLHMSHEPDGKRSRTS 177
Query: 142 FTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----RIKEG 197
+T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK ++K+
Sbjct: 178 YTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQIKIWFQNRRMKWKKDSKLKVKDT 237
Query: 198 ILIGVG 203
I G G
Sbjct: 238 IQNGNG 243
>gi|15823130|dbj|BAB68716.1| homeobox protein [Mus musculus musculus]
Length = 246
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 17 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 73
>gi|410934523|gb|AFV93978.1| homeodomain-containing protein Hox2, partial [Branchiostoma
lanceolatum]
Length = 191
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT FTN QL ELEKEFH+NKY+ + RR EIAS L LNE QVKIWFQNRRM+QK+R
Sbjct: 102 RTVFTNTQLLELEKEFHYNKYVCKPRRKEIASFLDLNERQVKIWFQNRRMRQKRR 156
>gi|73913462|gb|AAZ91666.1| HoxA2b, partial [Morone saxatilis]
Length = 184
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K+
Sbjct: 131 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQVKVWFQNRRMKHKR 184
>gi|46275810|ref|NP_032291.1| homeobox protein Hox-A4 [Mus musculus]
gi|26345064|dbj|BAC36181.1| unnamed protein product [Mus musculus]
gi|148666239|gb|EDK98655.1| homeobox A4 [Mus musculus]
Length = 285
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N+S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 167 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 226
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 227 WFQNRRMKWKK 237
>gi|340727696|ref|XP_003402174.1| PREDICTED: hypothetical protein LOC100650225 [Bombus terrestris]
Length = 355
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R +T Q ELEKEFH+N+YLTR RR+EIA +L L+E Q+KIWFQNRRMK KK K
Sbjct: 213 RQTYTRSQTLELEKEFHYNRYLTRKRRVEIARILSLSERQIKIWFQNRRMKAKKNGKPAY 272
Query: 199 --LIGVGEGSLMGAQGSSPNGGL 219
L EGS +Q SP+ GL
Sbjct: 273 SALEANSEGSSPRSQNVSPDSGL 295
>gi|443689504|gb|ELT91878.1| hypothetical protein CAPTEDRAFT_219808 [Capitella teleta]
Length = 201
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L E Q+KIWFQNRRMK KK K+
Sbjct: 37 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLTERQIKIWFQNRRMKYKKDQKQK 96
Query: 198 ILI---GVGEGSLMGAQ 211
L+ G+ S+ Q
Sbjct: 97 NLMEKQYAGDASMQDTQ 113
>gi|400180328|gb|AFP73296.1| Hoxa3alpha [Polyodon spathula]
Length = 413
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 7/84 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 172 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 229
Query: 198 ILIGVGEGSLMGAQGSSPNGGLYR 221
G+G + G SP +++
Sbjct: 230 -----GKGMMPSPGGQSPGSPVHQ 248
>gi|260835443|ref|XP_002612718.1| hypothetical protein BRAFLDRAFT_241843 [Branchiostoma floridae]
gi|229298097|gb|EEN68727.1| hypothetical protein BRAFLDRAFT_241843 [Branchiostoma floridae]
Length = 100
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT FTN QL ELEKEFH+NKY+ + RR EIAS L LNE QVKIWFQNRRM+QK+R +G
Sbjct: 5 RTVFTNTQLLELEKEFHYNKYVCKPRRKEIASYLDLNERQVKIWFQNRRMRQKRRDTKGR 64
Query: 199 -LIGVGEGSLM------GAQGSSPNGG 218
IG G+ A+ SP GG
Sbjct: 65 GEIGTDPGTTAEPADGGRAEEGSPGGG 91
>gi|121222237|gb|ABM47619.1| HOXB3 [Saguinus labiatus]
Length = 311
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +
Sbjct: 192 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAK 251
Query: 197 GILIGVGEGSLMGA 210
G+ G S G+
Sbjct: 252 GLASSSGGPSPAGS 265
>gi|58396723|gb|AAW72801.1| homeobox protein lab01, partial [Urechis unicinctus]
Length = 48
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 46/48 (95%)
Query: 140 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRR 187
TNFTNKQLTELEKEFHF++YLTR+RRIEIA+ L LNETQ+KIWFQNRR
Sbjct: 1 TNFTNKQLTELEKEFHFSRYLTRSRRIEIAASLGLNETQIKIWFQNRR 48
>gi|348521446|ref|XP_003448237.1| PREDICTED: homeobox protein Hox-A3-like [Oreochromis niloticus]
Length = 276
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT FTN QL ELEKEFHF+ YL R RR+E+A+ LQL + QVKIWFQNRRM+ KK K G
Sbjct: 123 RTAFTNNQLLELEKEFHFSPYLCRPRRLEMAAGLQLTDRQVKIWFQNRRMRYKKEQKYGK 182
Query: 199 LIGVGEGSLMGAQGSS 214
+ + + S SS
Sbjct: 183 MTSLSQWSTCNLSSSS 198
>gi|976094|emb|CAA57211.1| hox1 [Podocoryna carnea]
Length = 278
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 47/60 (78%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R F+ KQ+ ELEKEFHFNKYLTRARR+EI+ L L E Q+KIWFQNRRMK K+ KE +
Sbjct: 177 RVCFSQKQIVELEKEFHFNKYLTRARRVEISHTLDLTEAQIKIWFQNRRMKHKREQKEKM 236
>gi|148236299|ref|NP_001080293.1| homeobox A3 [Xenopus laevis]
gi|27469867|gb|AAH41731.1| Hoxa3a-prov protein [Xenopus laevis]
Length = 406
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K G
Sbjct: 166 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-G 224
Query: 198 ILIGVGEG 205
I + G
Sbjct: 225 ISMMTSSG 232
>gi|359323087|ref|XP_849475.2| PREDICTED: uncharacterized protein LOC607625 [Canis lupus familiaris]
Length = 1280
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 1217 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 1273
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 44/66 (66%)
Query: 137 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
SGR ++ Q ELEKEF FN YLTR RRIE++ L L E QVKIWFQNRRMK KK +
Sbjct: 541 SGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 600
Query: 197 GILIGV 202
L G
Sbjct: 601 DKLPGA 606
>gi|109944936|dbj|BAE96996.1| Antennapedia [Artemia franciscana]
gi|109944941|dbj|BAE96999.1| Antennapedia [Artemia franciscana]
Length = 357
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 49/71 (69%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 272 GRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 331
Query: 198 ILIGVGEGSLM 208
+ G +G L+
Sbjct: 332 VDSGCLDGILV 342
>gi|8182211|gb|AAB28662.2| Hoxa-4 [Mus sp.]
gi|9488660|gb|AAB30705.2| Hoxa-4 [Mus sp.]
Length = 285
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N+S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 167 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 226
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 227 WFQNRRMKWKK 237
>gi|6166218|sp|P06798.4|HXA4_MOUSE RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein MH-3
Length = 285
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N+S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 167 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 226
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 227 WFQNRRMKWKK 237
>gi|426238974|ref|XP_004013411.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3 [Ovis
aries]
Length = 327
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ +L ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 193 ARTAYTSARLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKWKKDSKMK 252
Query: 198 ILIGVGEGS 206
++G G+
Sbjct: 253 NILGARTGA 261
>gi|383209610|emb|CCE45703.1| antennapedia [Parasteatoda tepidariorum]
Length = 327
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----R 193
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK +
Sbjct: 241 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKSK 300
Query: 194 IKEGILIGVGEGSLM 208
++ G+++G G L+
Sbjct: 301 MEAGLVMGPGGPELV 315
>gi|321475842|gb|EFX86804.1| putative homeotic Antennapedia protein [Daphnia pulex]
Length = 657
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 49/71 (69%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 579 GRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKAK 638
Query: 198 ILIGVGEGSLM 208
+ G EG L+
Sbjct: 639 LDAGCLEGLLV 649
>gi|242011824|ref|XP_002426644.1| Homeobox protein Hox-A7, putative [Pediculus humanus corporis]
gi|212510808|gb|EEB13906.1| Homeobox protein Hox-A7, putative [Pediculus humanus corporis]
Length = 94
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 53/82 (64%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 13 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 72
Query: 198 ILIGVGEGSLMGAQGSSPNGGL 219
G G+G + +SP G L
Sbjct: 73 GEPGSGDGDSEISPQTSPQGAL 94
>gi|395540400|ref|XP_003772143.1| PREDICTED: homeobox protein Hox-A2 [Sarcophilus harrisii]
Length = 343
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 121 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 177
>gi|395519809|ref|XP_003764034.1| PREDICTED: homeobox protein Hox-D3 [Sarcophilus harrisii]
Length = 430
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 258
Query: 198 IL 199
I+
Sbjct: 259 IM 260
>gi|344270550|ref|XP_003407107.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4-like
[Loxodonta africana]
Length = 326
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N+S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 206 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 265
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 266 WFQNRRMKWKK 276
>gi|224086892|ref|XP_002186890.1| PREDICTED: homeobox protein Hox-B3 [Taeniopygia guttata]
Length = 392
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 154 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 210
>gi|395532696|ref|XP_003768404.1| PREDICTED: homeobox protein Hox-B3 [Sarcophilus harrisii]
Length = 409
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 169 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 226
>gi|397911060|gb|AFO68806.1| homeodomain-containing protein Hox3, partial [Branchiostoma
lanceolatum]
Length = 291
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 19 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKKEQK 76
>gi|387598534|gb|AFJ91923.1| homeodomain transcription factor 3, partial [Platynereis dumerilii]
Length = 351
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q+KIWFQNRRMK KK
Sbjct: 181 RTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLSERQIKIWFQNRRMKYKK 234
>gi|88604706|gb|ABD46724.1| homeobox protein proboscipedia [Endeis spinosa]
Length = 558
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRM+ K++
Sbjct: 218 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMRHKRQ 272
>gi|359754117|gb|AEV59537.1| HOXD3 [Macropus eugenii]
Length = 429
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 IL 199
I+
Sbjct: 258 IM 259
>gi|359754096|gb|AEV59518.1| HOXB3 [Macropus eugenii]
Length = 429
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 189 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 246
>gi|226822848|gb|ACO83083.1| homeobox A4 (predicted) [Dasypus novemcinctus]
Length = 318
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 201 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 260
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 261 WFQNRRMKWKK 271
>gi|311275744|ref|XP_003134889.1| PREDICTED: homeobox protein Hox-A4-like [Sus scrofa]
Length = 329
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK K
Sbjct: 226 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 282
>gi|126308240|ref|XP_001367096.1| PREDICTED: homeobox protein Hox-B3 isoform 1 [Monodelphis
domestica]
Length = 430
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 190 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 247
>gi|334323082|ref|XP_003340340.1| PREDICTED: homeobox protein Hox-B3 isoform 2 [Monodelphis
domestica]
Length = 405
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 166 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 222
>gi|255742462|gb|ACU32575.1| homeobox protein HoxC3 [Callorhinchus milii]
Length = 408
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMANLLSLSERQIKIWFQNRRMKYKKDNK 233
>gi|405967561|gb|EKC32709.1| Homeobox protein HOX3 [Crassostrea gigas]
Length = 402
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMK------QK 191
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L E Q+KIWFQNRRMK QK
Sbjct: 147 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLSLTERQIKIWFQNRRMKFKKEQRQK 206
Query: 192 KRIKEGILIGVGEGSLMGAQGSSPNGG 218
++ G GS +QGS+ GG
Sbjct: 207 PHSEKCKHDGNMSGSESDSQGSTSGGG 233
>gi|220898207|gb|ACL81461.1| HoxC6 [Latimeria menadoensis]
Length = 233
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 50/74 (67%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR ++ Q ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK
Sbjct: 144 GRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNTT 203
Query: 198 ILIGVGEGSLMGAQ 211
+ GEG GAQ
Sbjct: 204 SSLSAGEGPAPGAQ 217
>gi|281182584|ref|NP_001162367.1| homeobox protein Hox-A4 [Papio anubis]
gi|160904218|gb|ABX52202.1| homeobox A4 (predicted) [Papio anubis]
Length = 320
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 202 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 261
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 262 WFQNRRMKWKK 272
>gi|126326353|ref|XP_001368627.1| PREDICTED: homeobox protein Hox-D3 [Monodelphis domestica]
Length = 431
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 200 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 259
Query: 198 IL 199
I+
Sbjct: 260 IM 261
>gi|151935663|gb|ABS18813.1| Hox6 [Flaccisagitta enflata]
Length = 145
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRI+IA L L E Q+KIWFQNRRMK KK K
Sbjct: 39 GRQTYTRYQTLELEKEFHFNRYLTRRRRIDIAHALCLTERQIKIWFQNRRMKWKKEQKAA 98
Query: 198 ILIGV-GEGSLMGAQGSSPNG 217
+ +G+ G G L G P G
Sbjct: 99 LGVGMPGPGHLGVTMGGMPPG 119
>gi|225543572|ref|NP_571200.1| homeobox protein Hox-D3a [Danio rerio]
gi|223590219|sp|O42370.2|HXD3A_DANRE RecName: Full=Homeobox protein Hox-D3a; Short=Hox-D3
Length = 396
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 165 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 224
Query: 198 IL 199
I+
Sbjct: 225 IM 226
>gi|296209385|ref|XP_002751516.1| PREDICTED: uncharacterized protein LOC100410715 [Callithrix
jacchus]
Length = 716
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK K
Sbjct: 615 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 671
>gi|125489400|gb|ABN42909.1| homeodomain transcription factor Hox3 [Thermobia domestica]
Length = 277
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 19/98 (19%)
Query: 117 TALKYPPPAALSQHQSLLNNSG-------------------RTNFTNKQLTELEKEFHFN 157
T ++ PP + +HQ++L+ RT +T+ QL ELEKEFHFN
Sbjct: 168 TKIRSPPHISTLEHQTMLHQQADQQGIVSSEYSQDQPAKRARTAYTSAQLVELEKEFHFN 227
Query: 158 KYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
+YL R RRIE+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 228 RYLCRPRRIEMAALLNLTERQIKIWFQNRRMKYKKEQK 265
>gi|395738618|ref|XP_002818150.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4 [Pongo
abelii]
Length = 315
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 197 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 256
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 257 WFQNRRMKWKK 267
>gi|6252743|dbj|BAA86231.1| HOXA1A [Oryzias latipes]
Length = 91
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/45 (86%), Positives = 43/45 (95%)
Query: 155 HFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
HFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG++
Sbjct: 1 HFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLM 45
>gi|18307792|gb|AAL67685.1|AF435786_1 antennapedia [Artemia franciscana]
gi|109944938|dbj|BAE96997.1| Antennapedia [Artemia franciscana]
gi|109944944|dbj|BAE97001.1| Antennapedia [Artemia franciscana]
Length = 348
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 49/71 (69%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 272 GRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSK 331
Query: 198 ILIGVGEGSLM 208
+ G +G L+
Sbjct: 332 VDSGCLDGILV 342
>gi|385654482|gb|AFI61983.1| Hox-B3a [Anguilla japonica]
Length = 411
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 233
>gi|187438863|gb|ACD10894.1| Hoxa2a [Oryzias latipes]
Length = 185
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 50 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 106
>gi|62958671|gb|AAY23656.1| Hox protein [Oreochromis niloticus]
Length = 173
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT FTN QL ELEKEFHF+ YL R RR+E+A+ LQL + QVKIWFQNRRM+ KK K G
Sbjct: 20 RTAFTNNQLLELEKEFHFSPYLCRPRRLEMAAGLQLTDRQVKIWFQNRRMRYKKEQKYGK 79
Query: 199 LIGVGEGSLMGAQGSS 214
+ + + S SS
Sbjct: 80 MTSLSQWSTCNLSSSS 95
>gi|385654517|gb|AFI62013.1| Hox-C5b [Anguilla japonica]
Length = 240
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----R 193
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK +
Sbjct: 176 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQIKIWFQNRRMKWKKDSKMK 235
Query: 194 IKEGI 198
+KE +
Sbjct: 236 VKEAV 240
>gi|395830944|ref|XP_003788572.1| PREDICTED: homeobox protein Hox-A4 [Otolemur garnettii]
gi|202070726|gb|ACH95314.1| homeobox A4 (predicted) [Otolemur garnettii]
Length = 318
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK K
Sbjct: 223 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 279
>gi|170029585|ref|XP_001842672.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863991|gb|EDS27374.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 273
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 129 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 183
>gi|170649677|gb|ACB21262.1| homeobox A4 (predicted) [Callicebus moloch]
Length = 324
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK K
Sbjct: 223 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 279
>gi|190576599|gb|ACE79087.1| homeobox A4 (predicted) [Sorex araneus]
Length = 298
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 201 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLSERQVKIWFQNRRMKWKK 254
>gi|328778440|ref|XP_623903.2| PREDICTED: homeotic protein Sex combs reduced [Apis mellifera]
Length = 380
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 279 QSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 338
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 339 RRMKWKKEHK 348
>gi|410911100|ref|XP_003969028.1| PREDICTED: homeobox protein Hox-A3a-like isoform 1 [Takifugu
rubripes]
gi|119370772|sp|Q1KL12.1|HXA3A_FUGRU RecName: Full=Homeobox protein Hox-A3a
gi|94482762|gb|ABF22382.1| homeobox protein HoxA3a [Takifugu rubripes]
Length = 417
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 173 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 230
Query: 198 ILIGVGEGSLMGAQGSSP 215
G G + G SP
Sbjct: 231 -----GAGMMPSPGGQSP 243
>gi|390351581|ref|XP_003727687.1| PREDICTED: uncharacterized protein LOC100888710 [Strongylocentrotus
purpuratus]
Length = 381
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 46/58 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
RT FT+ QL ELEKEFHFN+YL R RR+E+A L L E Q+KIWFQNRRMK K+ +KE
Sbjct: 250 RTAFTSAQLVELEKEFHFNRYLCRPRRVEMAKSLNLTERQIKIWFQNRRMKYKRDMKE 307
>gi|332692524|gb|AEE90200.1| Homeobox C5b [Anguilla anguilla]
Length = 240
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----R 193
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK +
Sbjct: 176 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQIKIWFQNRRMKWKKDSKMK 235
Query: 194 IKEGI 198
+KE +
Sbjct: 236 VKEAV 240
>gi|74267535|dbj|BAE44266.1| hoxB3a [Oryzias latipes]
gi|83016946|dbj|BAE53473.1| hoxB3a [Oryzias latipes]
Length = 472
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 210 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 267
>gi|62857599|ref|NP_001015971.1| homeobox B3 [Xenopus (Silurana) tropicalis]
gi|89271899|emb|CAJ82652.1| homeo box B3 [Xenopus (Silurana) tropicalis]
gi|134026018|gb|AAI35407.1| homeobox B3 [Xenopus (Silurana) tropicalis]
Length = 386
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 159 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 216
>gi|410980871|ref|XP_003996797.1| PREDICTED: homeobox protein Hox-B3 [Felis catus]
Length = 428
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ L ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 189 RTAYTSAHLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 248
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 249 LASSSGGPSPAGS 261
>gi|332692491|gb|AEE90171.1| Homeobox B3a [Anguilla anguilla]
Length = 411
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 233
>gi|266457590|ref|NP_001161164.1| antennapedia-like protein [Nasonia vitripennis]
gi|254047496|gb|ACT63883.1| Antennapedia-like protein [Nasonia vitripennis]
Length = 362
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 51/80 (63%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 283 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKETKTK 342
Query: 198 ILIGVGEGSLMGAQGSSPNG 217
G+G + +SP G
Sbjct: 343 GEPNSGDGDTDISPQTSPQG 362
>gi|83415604|gb|ABC17998.1| predicted zerknuellt protein [Oncopeltus fasciatus]
Length = 198
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK-RIKE 196
RT +T+ QL ELEKEFHFN+YL R RRIE+A+ L+L+E Q+KIWFQNRRMK KK R +
Sbjct: 35 ARTAYTSIQLVELEKEFHFNRYLCRPRRIEMATQLRLSERQIKIWFQNRRMKYKKERRAK 94
Query: 197 GILIGVGEGS 206
G+L+ E S
Sbjct: 95 GVLVAHSEIS 104
>gi|119370784|sp|Q1KKX7.1|HXB3A_FUGRU RecName: Full=Homeobox protein Hox-B3a
gi|94482799|gb|ABF22417.1| homeobox protein HoxB3a [Takifugu rubripes]
Length = 474
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 216 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 272
>gi|213511470|ref|NP_001135142.1| homeobox protein HoxD3ab [Salmo salar]
gi|157816031|gb|ABV82034.1| homeobox protein HoxD3ab [Salmo salar]
Length = 399
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 171 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 230
Query: 198 IL 199
I+
Sbjct: 231 IM 232
>gi|1574928|gb|AAB09405.1| HEHBOX6, partial [Heliocidaris erythrogramma]
Length = 109
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK-RIKE 196
GR +T Q ELEKEFH+N+YLTR RRIEIA + L+E Q+KIWFQNRRMK KK R+++
Sbjct: 11 GRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSERQIKIWFQNRRMKWKKERVRD 70
Query: 197 GILIGVGEGSLMGAQGSSPN 216
G IG E +G N
Sbjct: 71 G--IGDDEDDAKEGEGDDAN 88
>gi|217035822|gb|ACJ74380.1| Hox3 [Branchiostoma lanceolatum]
Length = 409
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 137 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKKEQK 194
>gi|154183828|gb|ABS70768.1| Hoxa3a [Haplochromis burtoni]
Length = 417
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 5/66 (7%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 172 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 229
Query: 198 ILIGVG 203
GVG
Sbjct: 230 ---GVG 232
>gi|70569902|dbj|BAE06499.1| transcription factor protein [Ciona intestinalis]
Length = 114
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFH+NKYL R RRIEIA++L L E QVK+WFQNRRMK K++
Sbjct: 7 RTAYTNTQLLELEKEFHYNKYLCRPRRIEIATLLDLTERQVKVWFQNRRMKHKRQ 61
>gi|30314938|gb|AAP30719.1| Hox5 [Diplosoma listerianum]
Length = 164
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 75 LRDLFPVKGEIGVTKVQIPS-ELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSL 133
+ D F +I P+ +L+ L T + T PLT + YP + Q
Sbjct: 31 MSDRFHQALDISFQSYSSPAMDLTALSSSQQQTGEEKEDTEPLTVI-YPWMKRIHNCQGD 89
Query: 134 ---LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQ 190
N RT+++ Q ELEKEFH+N+YLTR RR+EIA +L L+E Q+KIWFQNRRM+
Sbjct: 90 PLDANKRRRTSYSRYQTLELEKEFHYNRYLTRRRRVEIAHILSLSERQIKIWFQNRRMRW 149
Query: 191 KKRIK-EGILIGVG 203
KK K +G VG
Sbjct: 150 KKENKNKGFSFSVG 163
>gi|444517764|gb|ELV11781.1| Homeobox protein Hox-B3 [Tupaia chinensis]
Length = 233
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 28 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 87
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 88 LASSSGGPSPAGS 100
>gi|1708286|sp|P50901.1|HOX3_BRAFL RecName: Full=Homeobox protein HOX3
gi|5720|emb|CAA48180.1| Amphihox3 [Branchiostoma floridae]
Length = 411
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 138 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKKEQK 195
>gi|213513003|ref|NP_001133026.1| homeobox protein HoxD3aa [Salmo salar]
gi|157816017|gb|ABV82027.1| homeobox protein HoxD3aa [Salmo salar]
gi|158702369|gb|ABW77556.1| homeobox protein HoxD3aa [Salmo salar]
Length = 397
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 169 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 228
Query: 198 IL 199
I+
Sbjct: 229 IM 230
>gi|432107306|gb|ELK32720.1| Homeobox protein Hox-D3 [Myotis davidii]
Length = 454
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 197 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 256
Query: 198 IL 199
IL
Sbjct: 257 IL 258
>gi|6015517|emb|CAB57800.1| OX2.7 [Gallus gallus]
Length = 96
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 10/87 (11%)
Query: 106 TSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 165
+SPST+ + K PP ++ S+ RT +T+ QL ELEKEFHFN+YL R RR
Sbjct: 13 SSPSTE---TCSGEKTPPGSSASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRR 62
Query: 166 IEIASVLQLNETQVKIWFQNRRMKQKK 192
+E+A++L L+E Q+KIWFQNRRMK KK
Sbjct: 63 VEMANLLNLSERQIKIWFQNRRMKYKK 89
>gi|188528951|ref|NP_001120901.1| homeobox A3 [Xenopus (Silurana) tropicalis]
gi|183985812|gb|AAI66398.1| hoxa3 protein [Xenopus (Silurana) tropicalis]
Length = 406
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 167 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 224
>gi|429510500|gb|AFZ94988.1| transcription factor Hox 3 [Petromyzon marinus]
Length = 498
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 240 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDHKS-- 297
Query: 199 LIGVGEGSLMGAQ 211
G GS G+Q
Sbjct: 298 ---KGVGSSPGSQ 307
>gi|123204569|gb|ABM73583.1| homeodomain protein [Megalobrama amblycephala]
Length = 243
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 12 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 71
Query: 198 IL 199
I+
Sbjct: 72 IM 73
>gi|410901719|ref|XP_003964343.1| PREDICTED: homeobox protein Hox-B3a-like [Takifugu rubripes]
gi|45772175|tpg|DAA05217.1| TPA_exp: Hoxb3a [Takifugu rubripes]
Length = 477
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 218 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 275
>gi|397911058|gb|AFO68805.1| homeodomain-containing protein Hox3, partial [Branchiostoma
lanceolatum]
Length = 396
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 130 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKKEQK 187
>gi|348522801|ref|XP_003448912.1| PREDICTED: homeobox protein Hox-A3a-like isoform 1 [Oreochromis
niloticus]
Length = 421
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 5/66 (7%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 174 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 231
Query: 198 ILIGVG 203
GVG
Sbjct: 232 ---GVG 234
>gi|222478310|gb|ACM62732.1| homeodomain transcription factor protein HOX1 [Clytia
hemisphaerica]
Length = 301
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
R F+ KQ+ ELEKEFHFNKYLTRARR+EI+ L L E Q+KIWFQNRRMK K+ +K
Sbjct: 212 RICFSQKQVVELEKEFHFNKYLTRARRVEISQSLNLTEAQIKIWFQNRRMKHKREMK 268
>gi|410934525|gb|AFV93979.1| homeodomain-containing protein Hox2, partial [Branchiostoma
lanceolatum]
Length = 131
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR-IKEG 197
RT FTN QL ELEKEFH+NKY+ + RR E+AS L LNE QVKIWFQNRRM+QK+R K
Sbjct: 36 RTVFTNTQLLELEKEFHYNKYVCKPRRKEVASFLDLNERQVKIWFQNRRMRQKRRDTKSR 95
Query: 198 ILIGVG-EGSLMGAQG-----SSPNGG 218
IG E + A G SP GG
Sbjct: 96 SEIGNDLEATAAPADGDREEEDSPGGG 122
>gi|119617143|gb|EAW96737.1| hCG2044077 [Homo sapiens]
Length = 321
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 258 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 314
>gi|28629645|gb|AAO43028.1| HoxB3 [Latimeria menadoensis]
Length = 252
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 17 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 74
>gi|383849607|ref|XP_003700436.1| PREDICTED: homeobox protein Hox-A5a-like [Megachile rotundata]
Length = 373
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 272 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 331
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 332 RRMKWKKEHKMASM 345
>gi|296488418|tpg|DAA30531.1| TPA: homeobox A4 isoform 2 [Bos taurus]
Length = 253
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 152 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 205
>gi|220898215|gb|ACL81468.1| HoxD3 [Latimeria menadoensis]
Length = 396
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 165 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 224
Query: 198 IL 199
I+
Sbjct: 225 IM 226
>gi|242011846|ref|XP_002426655.1| proboscipedia, putative [Pediculus humanus corporis]
gi|212510819|gb|EEB13917.1| proboscipedia, putative [Pediculus humanus corporis]
Length = 535
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 19 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 73
>gi|148225480|ref|NP_001091156.1| homeobox protein Hox-D3 [Xenopus laevis]
gi|223635192|sp|A1L2P5.1|HXD3_XENLA RecName: Full=Homeobox protein Hox-D3
gi|120537996|gb|AAI29641.1| LOC100036911 protein [Xenopus laevis]
Length = 413
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 182 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 241
Query: 198 IL 199
I+
Sbjct: 242 IM 243
>gi|403296831|ref|XP_003939298.1| PREDICTED: homeobox protein Hox-C10 [Saimiri boliviensis
boliviensis]
Length = 321
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 258 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 314
>gi|332242652|ref|XP_003270497.1| PREDICTED: homeobox protein Hox-A5-like isoform 3 [Nomascus
leucogenys]
Length = 326
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 225 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 278
>gi|301128904|emb|CBL59366.1| HoxD2 [Scyliorhinus canicula]
Length = 364
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFH+N+YL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 136 RTTYTNTQLLELEKEFHYNRYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTR 192
>gi|158702379|gb|ABW77565.1| homeobox protein HoxD3ab [Salmo salar]
Length = 399
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 171 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 230
Query: 198 IL 199
I+
Sbjct: 231 IM 232
>gi|332692534|gb|AEE90209.1| Homeobox D3a [Anguilla anguilla]
gi|385654531|gb|AFI62025.1| Hox-D3a [Anguilla japonica]
Length = 396
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 165 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 224
Query: 198 IL 199
I+
Sbjct: 225 IM 226
>gi|319429388|gb|ADV56969.1| homeodomain protein HoxD3a [Opsariichthys bidens]
Length = 287
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 148 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 207
Query: 198 IL 199
I+
Sbjct: 208 IM 209
>gi|114612533|ref|XP_001162640.1| PREDICTED: homeobox protein Hox-A4 [Pan troglodytes]
Length = 320
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 202 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 261
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 262 WFQNRRMKWKK 272
>gi|301612427|ref|XP_002935734.1| PREDICTED: homeobox protein Hox-D3 [Xenopus (Silurana) tropicalis]
Length = 415
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 184 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 243
Query: 198 IL 199
I+
Sbjct: 244 IM 245
>gi|553929|gb|AAA37846.1| homeobox mh23-related protein, partial [Mus musculus]
Length = 186
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 48 RTTYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 107
Query: 198 IL 199
IL
Sbjct: 108 IL 109
>gi|410911102|ref|XP_003969029.1| PREDICTED: homeobox protein Hox-A3a-like isoform 2 [Takifugu
rubripes]
Length = 404
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 160 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 217
Query: 198 ILIGVGEGSLMGAQGSSP 215
G G + G SP
Sbjct: 218 -----GAGMMPSPGGQSP 230
>gi|359321212|ref|XP_539486.3| PREDICTED: homeobox protein Hox-A4 [Canis lupus familiaris]
Length = 317
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 216 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 269
>gi|319429384|gb|ADV56967.1| homeodomain protein HoxD3a [Hypophthalmichthys nobilis]
Length = 284
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 145 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 204
Query: 198 IL 199
I+
Sbjct: 205 IM 206
>gi|262263018|gb|ACY39978.1| HoxD3 [Heterodontus francisci]
Length = 394
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 163 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 222
Query: 198 IL 199
I+
Sbjct: 223 IM 224
>gi|184289|gb|AAA58664.1| Hox 1.4 [Homo sapiens]
Length = 320
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 202 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 261
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 262 WFQNRRMKWKK 272
>gi|63103212|gb|AAD46167.2|AF151664_1 probiscipedia homeobox protein [Alitta virens]
Length = 193
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++ +
Sbjct: 21 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKFKRQTQ 77
>gi|167427227|gb|ABZ80208.1| homeobox A4 (predicted) [Callithrix jacchus]
Length = 322
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 221 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 274
>gi|226434215|gb|ACO56215.1| hoxb3a, partial [Oreochromis niloticus]
Length = 404
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 200 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 257
>gi|255742478|gb|ACU32590.1| homeobox protein HoxD3 [Callorhinchus milii]
Length = 394
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 163 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 222
Query: 198 IL 199
I+
Sbjct: 223 IM 224
>gi|208966492|dbj|BAG73260.1| homeobox A4 [synthetic construct]
Length = 320
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 272
>gi|319429392|gb|ADV56971.1| homeodomain protein HoxD3a [Luciobrama macrocephalus]
Length = 286
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 147 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 206
Query: 198 IL 199
I+
Sbjct: 207 IM 208
>gi|319429390|gb|ADV56970.1| homeodomain protein HoxD3a [Ochetobius elongatus]
Length = 296
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 157 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 216
Query: 198 IL 199
I+
Sbjct: 217 IM 218
>gi|319429378|gb|ADV56964.1| homeodomain protein HoxD3a [Mylopharyngodon piceus]
Length = 289
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 150 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 209
Query: 198 IL 199
I+
Sbjct: 210 IM 211
>gi|24266676|gb|AAN52288.1| Hoxb3a protein [Morone saxatilis]
Length = 415
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 223 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 280
>gi|28629673|gb|AAO43042.1| HoxD3 [Latimeria menadoensis]
Length = 248
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 17 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 76
Query: 198 IL 199
I+
Sbjct: 77 IM 78
>gi|66793386|ref|NP_571192.2| homeobox protein Hox-B3a [Danio rerio]
gi|66267386|gb|AAH95559.1| Homeo box B3a [Danio rerio]
Length = 417
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 183 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 240
>gi|60392404|sp|O42368.3|HXB3A_DANRE RecName: Full=Homeobox protein Hox-B3a; Short=Hox-B3
gi|26984639|emb|CAD59116.1| SI:dZ254O17.6 (homeo box protein B3a) [Danio rerio]
gi|27817786|emb|CAD61096.1| Hoxb3a protein [Danio rerio]
gi|45772167|tpg|DAA05213.1| TPA_exp: Hoxb3a variant 1 [Danio rerio]
gi|45772169|tpg|DAA05214.1| TPA_exp: Hoxb3a variant 2 [Danio rerio]
Length = 417
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 183 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 240
>gi|359754085|gb|AEV59508.1| HOXA4 [Macropus eugenii]
Length = 295
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 201 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 254
>gi|62958645|gb|AAY23648.1| Hox protein [Oreochromis niloticus]
Length = 289
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 25 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 82
>gi|402886197|ref|XP_003906524.1| PREDICTED: homeobox protein Hox-C10 [Papio anubis]
Length = 320
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 257 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 313
>gi|332692479|gb|AEE90160.1| Homeobox A3b [Anguilla anguilla]
Length = 412
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK
Sbjct: 173 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 227
>gi|301614400|ref|XP_002936696.1| PREDICTED: homeobox protein Hox-D3 [Xenopus (Silurana) tropicalis]
Length = 394
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 45/55 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +TN QL ELEKEFHFN+YL R RR+E+A +L L+E Q+KIWFQNRRMK KK
Sbjct: 166 ARTAYTNSQLVELEKEFHFNRYLCRPRRLEMAKLLNLSERQIKIWFQNRRMKFKK 220
>gi|54607270|gb|AAL23667.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 211 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 270
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 271 RRMKWKKEHKMASM 284
>gi|405109808|emb|CCH51006.1| antennapedia, partial [Phalangium opilio]
Length = 206
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 48/69 (69%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 128 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKAK 187
Query: 198 ILIGVGEGS 206
+ G+ G+
Sbjct: 188 LEAGLAMGA 196
>gi|348517821|ref|XP_003446431.1| PREDICTED: homeobox protein Hox-B3a-like [Oreochromis niloticus]
Length = 462
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 198 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 255
>gi|293358572|ref|XP_002729358.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
gi|392347314|ref|XP_003749796.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
Length = 285
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 167 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 226
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 227 WFQNRRMKWKK 237
>gi|291461542|dbj|BAI83405.1| antennapedia 2 [Parasteatoda tepidariorum]
Length = 327
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----R 193
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q KIWFQNRRMK KK +
Sbjct: 241 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQTKIWFQNRRMKWKKENKSK 300
Query: 194 IKEGILIGVGEGSLM 208
++ G+++G G L+
Sbjct: 301 MEAGLVMGPGGPELV 315
>gi|5081328|gb|AAD39348.1| hox6 protein [Nematostella vectensis]
Length = 269
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 47/60 (78%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R FT +QL ELEKEFHF+KYLTR RRIEIA+ L+L E Q+KIWFQNRRMK K K+ +
Sbjct: 162 RFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKIWFQNRRMKWKGEFKDSL 221
>gi|385654470|gb|AFI61972.1| Hox-A3b [Anguilla japonica]
Length = 412
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK
Sbjct: 173 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 227
>gi|348581047|ref|XP_003476289.1| PREDICTED: homeobox protein Hox-C4-like [Cavia porcellus]
gi|351706132|gb|EHB09051.1| Homeobox protein Hox-C4 [Heterocephalus glaber]
Length = 264
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 218
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G G +L A
Sbjct: 219 NTKVRSAPPAGAGPSTLSAA 238
>gi|301128903|emb|CBL59365.1| HoxD3 [Scyliorhinus canicula]
Length = 394
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 163 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 222
Query: 198 IL 199
I+
Sbjct: 223 IM 224
>gi|172087584|ref|XP_001913334.1| Hox4.1 [Oikopleura dioica]
gi|48994254|gb|AAT47829.1| Hox4.1 [Oikopleura dioica]
Length = 197
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 47/61 (77%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N RT +T Q ELEKEFHFN+YLTR RRIEIA+ LQL+E QVKIWFQNRRMK KK
Sbjct: 129 NKRIRTAYTRHQTLELEKEFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKEH 188
Query: 195 K 195
K
Sbjct: 189 K 189
>gi|975241|gb|AAA75162.1| homeobox protein, partial [Mus musculus]
Length = 150
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 12/93 (12%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK------ 192
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK
Sbjct: 39 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 98
Query: 193 -RIKEGILIGVGEGSLMGA-----QGSSPNGGL 219
+I+ G G E L G + S+P G+
Sbjct: 99 TKIRSGGTAGAAEAPLAGPTEAPLRSSAPQAGV 131
>gi|201023305|ref|NP_001128396.1| sex combs reduced [Nasonia vitripennis]
Length = 390
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 289 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 348
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 349 RRMKWKKEHK 358
>gi|253828363|gb|ACT36587.1| Anthox6a [Nematostella vectensis]
Length = 207
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Query: 119 LKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 178
+K PPP Q + ++ RT ++ +QL ELEKEFH+N+YL R RRIEIA L+L E Q
Sbjct: 56 VKGPPP----QTKECTSDKNRTIYSTRQLVELEKEFHYNRYLCRPRRIEIAQSLELTEKQ 111
Query: 179 VKIWFQNRRMKQKKRIK 195
VKIWFQNRRMK KK K
Sbjct: 112 VKIWFQNRRMKWKKENK 128
>gi|220898191|gb|ACL81446.1| HoxB3 [Latimeria menadoensis]
Length = 398
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 163 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 220
>gi|350405517|ref|XP_003487459.1| PREDICTED: hypothetical protein LOC100747162 [Bombus impatiens]
Length = 372
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 271 QSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 330
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 331 RRMKWKKEHKMASM 344
>gi|348522803|ref|XP_003448913.1| PREDICTED: homeobox protein Hox-A3a-like isoform 2 [Oreochromis
niloticus]
Length = 407
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 5/66 (7%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 160 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 217
Query: 198 ILIGVG 203
GVG
Sbjct: 218 ---GVG 220
>gi|340727747|ref|XP_003402198.1| PREDICTED: hypothetical protein LOC100643224 [Bombus terrestris]
Length = 372
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 271 QSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 330
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 331 RRMKWKKEHKMASM 344
>gi|262263019|gb|ACY39979.1| HoxD2 [Heterodontus francisci]
Length = 389
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFH+N+YL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 161 RTTYTNTQLLELEKEFHYNRYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTR 217
>gi|284005063|ref|NP_001164871.1| homeobox protein Hox-A4 [Oryctolagus cuniculus]
gi|217418307|gb|ACK44309.1| homeobox A4 (predicted) [Oryctolagus cuniculus]
Length = 319
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 220 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLSERQVKIWFQNRRMKWKK 273
>gi|27525471|emb|CAD59668.1| putative homeobox protein hox2 [Ciona intestinalis]
Length = 134
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFH+NKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 11 RTAYTNTQLLELEKEFHYNKYLCRPRRIEIATRLDLTERQVKVWFQNRRMKHKRQ 65
>gi|60392413|sp|Q8AWZ2.1|HXA3A_DANRE RecName: Full=Homeobox protein Hox-A3a
gi|23503779|emb|CAD52134.1| SI:dZ227P06.1 (homeo box A3a) [Danio rerio]
gi|49904267|gb|AAH76469.1| Hoxa3a protein [Danio rerio]
Length = 410
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 166 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 223
Query: 198 ILIGVGEGSLMGAQ 211
G+G GAQ
Sbjct: 224 ---GLGMMPSPGAQ 234
>gi|148613882|ref|NP_002132.3| homeobox protein Hox-A4 [Homo sapiens]
gi|116242514|sp|Q00056.3|HXA4_HUMAN RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein Hox-1D
gi|51094980|gb|EAL24224.1| homeo box A4 [Homo sapiens]
gi|119614278|gb|EAW93872.1| homeobox A4 [Homo sapiens]
gi|182887795|gb|AAI60036.1| Homeobox A4 [synthetic construct]
Length = 320
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 272
>gi|313240264|emb|CBY32609.1| unnamed protein product [Oikopleura dioica]
Length = 194
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 47/61 (77%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N RT +T Q ELEKEFHFN+YLTR RRIEIA+ LQL+E QVKIWFQNRRMK KK
Sbjct: 126 NKRIRTAYTRHQTLELEKEFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKEH 185
Query: 195 K 195
K
Sbjct: 186 K 186
>gi|299473899|gb|ADJ18232.1| Hox3 protein [Gibbula varia]
Length = 257
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIK 195
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q+KIWFQNRRMK KK R+K
Sbjct: 17 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLSERQIKIWFQNRRMKFKKDCRLK 76
Query: 196 EG 197
G
Sbjct: 77 GG 78
>gi|213513736|ref|NP_001135093.1| homeobox protein HoxC5ba [Salmo salar]
gi|157815982|gb|ABV82010.1| homeobox protein HoxC5ba [Salmo salar]
gi|158702349|gb|ABW77538.1| homeobox protein HoxC5ba [Salmo salar]
Length = 249
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 49/64 (76%), Gaps = 4/64 (6%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----RI 194
RT++T Q ELEKEFHFN+YLTR RRIEIA L LNE Q+KIWFQNRRMK KK +I
Sbjct: 186 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLNERQIKIWFQNRRMKWKKDSKLKI 245
Query: 195 KEGI 198
KE I
Sbjct: 246 KESI 249
>gi|157816067|gb|ABV82052.1| homeobox protein HoxA3ab [Salmo salar]
Length = 422
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 176 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 233
Query: 198 ILIGVGEGSLMGAQGSSP 215
G G + G SP
Sbjct: 234 -----GCGMMPSPGGQSP 246
>gi|319429380|gb|ADV56965.1| homeodomain protein HoxD3a [Ctenopharyngodon idella]
Length = 288
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 149 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 208
Query: 198 IL 199
I+
Sbjct: 209 IM 210
>gi|86515396|ref|NP_001034523.1| cephalothorax [Tribolium castaneum]
gi|13241681|gb|AAK16422.1|AF321227_2 Scr [Tribolium castaneum]
gi|270002805|gb|EEZ99252.1| sex combs reduced [Tribolium castaneum]
Length = 312
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 211 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 270
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 271 RRMKWKKEHKMASM 284
>gi|260835441|ref|XP_002612717.1| hypothetical protein BRAFLDRAFT_102176 [Branchiostoma floridae]
gi|229298096|gb|EEN68726.1| hypothetical protein BRAFLDRAFT_102176 [Branchiostoma floridae]
Length = 507
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 234 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYKKEQK 291
>gi|157816129|gb|ABV82082.1| homeobox protein HoxB3aa3 [Salmo salar]
Length = 417
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 182 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 239
>gi|332242650|ref|XP_003270496.1| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Nomascus
leucogenys]
Length = 302
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK K
Sbjct: 201 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 257
>gi|18858827|ref|NP_571609.1| homeobox protein Hox-A3a [Danio rerio]
gi|4322058|gb|AAD15938.1| homeobox protein [Danio rerio]
Length = 411
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 167 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK-- 224
Query: 198 ILIGVGEGSLMGAQ 211
G+G GAQ
Sbjct: 225 ---GLGMMPSPGAQ 235
>gi|332242648|ref|XP_003270495.1| PREDICTED: homeobox protein Hox-A5-like isoform 1 [Nomascus
leucogenys]
Length = 300
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK K
Sbjct: 199 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 255
>gi|7229537|gb|AAF42868.1|AF227628_1 sex combs reduced Scr [Tribolium castaneum]
gi|54607266|gb|AAL26542.2| cephalothorax [Tribolium castaneum]
gi|54607268|gb|AAL27023.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 211 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 270
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 271 RRMKWKKEHKMASM 284
>gi|213511652|ref|NP_001135143.1| homeobox protein HoxA3aa [Salmo salar]
gi|157816047|gb|ABV82042.1| homeobox protein HoxA3aa [Salmo salar]
Length = 422
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 177 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 234
>gi|319429937|gb|ADV57242.1| homeodomain protein HoxB3a [Ochetobius elongatus]
Length = 230
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 1 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 57
>gi|432871990|ref|XP_004072062.1| PREDICTED: homeobox protein Hox-B3a-like [Oryzias latipes]
Length = 512
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 250 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 307
>gi|338227733|gb|AEI91062.1| sex combs reduced [Onthophagus binodis]
Length = 300
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 229 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 288
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 289 RRMKWKKEHK 298
>gi|126326351|ref|XP_001368596.1| PREDICTED: homeobox protein Hox-D4-like [Monodelphis domestica]
Length = 238
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 71/125 (56%), Gaps = 22/125 (17%)
Query: 93 PSELSP-LGVH-PHPTSPSTDYTTPLTALKYPP-------PAALSQ-----HQSLLNNS- 137
P+ L P G H P P PS+ + L LK PP PA + H + +N +
Sbjct: 83 PASLYPGQGEHCPQPPIPSSRACSQLANLKQPPNGTALKQPAVVYPWMKKVHVNSVNPNY 142
Query: 138 -------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQ 190
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK
Sbjct: 143 TGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKW 202
Query: 191 KKRIK 195
KK K
Sbjct: 203 KKDHK 207
>gi|59808843|gb|AAH90114.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 233
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 84 EIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYP--PPAALSQHQSLLNNS---- 137
E +T PS H HP SP D + YP A +S+ S ++
Sbjct: 91 ESSITPTSPPSCSLIASDHKHPDSPGQD------PVVYPWMKKAHISRASSTYSDGEAKR 144
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L+L+E Q+KIWFQNRRMK KK
Sbjct: 145 SRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKK 199
>gi|391339412|ref|XP_003744044.1| PREDICTED: uncharacterized protein LOC100902699 [Metaseiulus
occidentalis]
Length = 274
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT++T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK R+
Sbjct: 152 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKEHRLAN 211
Query: 197 GILIGVGEG-SLMGAQG 212
+ +G +LMG+ G
Sbjct: 212 TVPAQIGHPMALMGSAG 228
>gi|426228408|ref|XP_004008301.1| PREDICTED: homeobox protein Hox-A4 [Ovis aries]
Length = 218
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 117 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 170
>gi|172355404|ref|NP_001116487.1| homeobox B4 [Xenopus (Silurana) tropicalis]
gi|171846845|gb|AAI61550.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 234
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 84 EIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYP--PPAALSQHQSLLNNS---- 137
E +T PS H HP SP D + YP A +S+ S ++
Sbjct: 92 ESSITPTSPPSCSLIASDHKHPDSPGQD------PVVYPWMKKAHISRASSTYSDGEAKR 145
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L+L+E Q+KIWFQNRRMK KK
Sbjct: 146 SRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKK 200
>gi|88604714|gb|ABD46728.1| homeobox protein sex comb reduced [Endeis spinosa]
Length = 265
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE-- 196
RT++T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K+
Sbjct: 184 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKEHKQLP 243
Query: 197 -----GILIGVGEGSLMG 209
G + G+ S++G
Sbjct: 244 GSMAAGQIPGMPPNSVLG 261
>gi|319429925|gb|ADV57236.1| homeodomain protein HoxB3a [Hypophthalmichthys nobilis]
Length = 230
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 1 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 57
>gi|242011842|ref|XP_002426653.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510817|gb|EEB13915.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 398
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 70/127 (55%), Gaps = 13/127 (10%)
Query: 76 RDLFPVKGEIGVTKVQIPSELSPLG-----VHPHPTSPSTDYTTPLTALKYPPPAALSQH 130
D+ P + EI P E++ +G P+S + +T + A +A H
Sbjct: 136 NDIQPTRCEI----YNDPREITKMGGGNEDASVTPSSSTDVFTHSVDAHPATVTSASQGH 191
Query: 131 QSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQ 190
Q RT +T+ QL ELEKEFH+N+YL R RRIE+A+ L L E Q+KIWFQNRRMK
Sbjct: 192 QK----RARTAYTSSQLVELEKEFHYNRYLCRPRRIELANQLNLTERQIKIWFQNRRMKY 247
Query: 191 KKRIKEG 197
KK K G
Sbjct: 248 KKEQKPG 254
>gi|123204452|gb|ABM73557.1| homeodomain protein [Megalobrama amblycephala]
Length = 246
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 16 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 73
>gi|319429921|gb|ADV57234.1| homeodomain protein HoxB3a [Ctenopharyngodon idella]
gi|319429923|gb|ADV57235.1| homeodomain protein HoxB3a [Hypophthalmichthys molitrix]
gi|319429927|gb|ADV57237.1| homeodomain protein HoxB3a [Squaliobarbus curriculus]
gi|319429931|gb|ADV57239.1| homeodomain protein HoxB3a [Xenocypris argentea]
gi|319429933|gb|ADV57240.1| homeodomain protein HoxB3a [Culter alburnus]
gi|319429939|gb|ADV57243.1| homeodomain protein HoxB3a [Luciobrama macrocephalus]
Length = 230
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 1 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 57
>gi|157816127|gb|ABV82081.1| homeobox protein HoxB3aa2 [Salmo salar]
Length = 401
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 166 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 223
>gi|123917996|sp|Q3V5Z9.1|HXD3_ORYLA RecName: Full=Homeobox protein Hox-D3
gi|74267577|dbj|BAE44287.1| hoxD3a [Oryzias latipes]
gi|83016980|dbj|BAE53501.1| hoxD3a [Oryzias latipes]
Length = 395
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 164 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 220
>gi|410895375|ref|XP_003961175.1| PREDICTED: homeobox protein Hox-A3-like [Takifugu rubripes]
Length = 273
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T+ QL ELEKEFHF++YL R RR+E+AS+L L E Q+KIWFQNRRMKQKK
Sbjct: 104 RTAYTSAQLVELEKEFHFSRYLCRPRRVEMASLLNLQERQIKIWFQNRRMKQKK 157
>gi|213512373|ref|NP_001133048.1| homeobox protein HoxB3aa [Salmo salar]
gi|157816093|gb|ABV82065.1| homeobox protein HoxB3aa [Salmo salar]
gi|158702270|gb|ABW77469.1| homeobox protein HoxB3aa [Salmo salar]
Length = 418
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 183 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 240
>gi|444713454|gb|ELW54353.1| Homeobox protein Hox-A3 [Tupaia chinensis]
Length = 620
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK K
Sbjct: 22 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 78
>gi|432933123|ref|XP_004081816.1| PREDICTED: homeobox protein Hox-D3-like [Oryzias latipes]
Length = 399
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 168 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 224
>gi|390464421|ref|XP_002806951.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100411183 [Callithrix jacchus]
Length = 954
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 159 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 215
>gi|238822187|gb|ACR58763.1| sex combs reduced [Onthophagus sagittarius]
Length = 298
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 218 QSTVNANGGTKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 277
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 278 RRMKWKKEHK 287
>gi|158702226|gb|ABW77444.1| homeobox protein HoxA3aa [Salmo salar]
Length = 264
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 19 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 76
>gi|94482808|gb|ABF22425.1| homeobox protein HoxB3b [Takifugu rubripes]
Length = 275
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T+ QL ELEKEFHF++YL R RR+E+AS+L L E Q+KIWFQNRRMKQKK
Sbjct: 106 RTAYTSAQLVELEKEFHFSRYLCRPRRVEMASLLNLQERQIKIWFQNRRMKQKK 159
>gi|327275808|ref|XP_003222664.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3-like
[Anolis carolinensis]
Length = 410
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 168 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 225
>gi|46048894|ref|NP_990074.1| homeobox protein Hox-B3 [Gallus gallus]
gi|1708352|sp|P23682.2|HXB3_CHICK RecName: Full=Homeobox protein Hox-B3; AltName: Full=Homeobox
protein Hox-2.7; Short=Chox-2.7
gi|443794|emb|CAA52613.1| HOX(B3) (CHOX 2.7) [Gallus gallus]
Length = 399
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 162 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 219
>gi|319429935|gb|ADV57241.1| homeodomain protein HoxB3a [Opsariichthys bidens]
Length = 230
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 1 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 57
>gi|284795292|ref|NP_001165253.1| homeobox protein HoxB3ab [Salmo salar]
gi|157816111|gb|ABV82074.1| homeobox protein HoxB3ab [Salmo salar]
gi|158702282|gb|ABW77480.1| homeobox protien HoxB3ab [Salmo salar]
Length = 404
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K
Sbjct: 169 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 226
>gi|357623860|gb|EHJ74850.1| sex combs reduced-like protein [Danaus plexippus]
Length = 336
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 235 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 294
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 295 RRMKWKKEHKMASM 308
>gi|74267509|dbj|BAE44253.1| hoxA5a [Oryzias latipes]
gi|83016929|dbj|BAE53461.1| hoxA5a [Oryzias latipes]
Length = 279
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIK 195
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 206 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 265
Query: 196 EGILIGVGEGSL 207
+ G G+
Sbjct: 266 SMSMAAAGGGAY 277
>gi|148225917|ref|NP_001089733.1| homeobox protein Hox-B4 [Xenopus laevis]
gi|123238|sp|P09070.1|HXB4_XENLA RecName: Full=Homeobox protein Hox-B4; AltName: Full=Xhox-1A
gi|214265|gb|AAA49756.1| homeobox protein 1A [Xenopus laevis]
gi|76780348|gb|AAI06430.1| MGC131119 protein [Xenopus laevis]
Length = 232
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 81 VKGEIGVTKVQIPSELSPLGV-----HPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLN 135
V GE + +P+ P H HP SP D K A S +
Sbjct: 82 VPGEKAHLEPHMPTSSPPSCSLKSSEHKHPDSPEQDPVVYPWMKKAHISKATSTYSDGEA 141
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L+L+E Q+KIWFQNRRMK KK K
Sbjct: 142 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHK 201
Query: 196 -EGILIGVGEGSLMGAQGSSPN 216
I + G SPN
Sbjct: 202 LPNTKIKSNPSVNLQIAGGSPN 223
>gi|348519657|ref|XP_003447346.1| PREDICTED: homeobox protein Hox-D3 [Oreochromis niloticus]
Length = 399
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 168 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 224
>gi|348522805|ref|XP_003448914.1| PREDICTED: homeobox protein Hox-A5-like [Oreochromis niloticus]
Length = 281
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIK 195
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 208 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 267
Query: 196 EGILIGVGEGSL 207
+ G G+
Sbjct: 268 SMSMAAAGGGAY 279
>gi|324516905|gb|ADY46669.1| Homeobox protein lin-39 [Ascaris suum]
Length = 206
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 47/64 (73%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T Q+ ELEKEFHFNKYLTR RRIEIA L L E QVKIWFQNRRMK KK K+
Sbjct: 116 RTAYTRNQVLELEKEFHFNKYLTRKRRIEIAHSLMLTERQVKIWFQNRRMKHKKENKDKP 175
Query: 199 LIGV 202
+ V
Sbjct: 176 VPSV 179
>gi|4204923|gb|AAD10852.1| hox homeobox transcription factor HOXB3 [Homo sapiens]
Length = 431
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ + ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK KK K +G
Sbjct: 192 RTAYTSAHVVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKG 251
Query: 198 ILIGVGEGSLMGA 210
+ G S G+
Sbjct: 252 LASSSGGPSPAGS 264
>gi|62958699|gb|AAY23665.1| Hox protein [Oreochromis niloticus]
Length = 247
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 16 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 72
>gi|321475847|gb|EFX86809.1| putative homeotic HOX3 protein [Daphnia pulex]
Length = 742
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/70 (61%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 123 PPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIW 182
PP +LS Q RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L E Q+KIW
Sbjct: 279 PPTSLSPEQPA--KRARTAYTSAQLVELEKEFHFNRYLCRPRRIEMATLLNLTERQIKIW 336
Query: 183 FQNRRMKQKK 192
FQNRRMK KK
Sbjct: 337 FQNRRMKFKK 346
>gi|440899270|gb|ELR50599.1| Homeobox protein Hox-A4, partial [Bos grunniens mutus]
Length = 170
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 68 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 122
>gi|154183830|gb|ABS70770.1| Hoxa5a [Haplochromis burtoni]
Length = 281
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIK 195
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 208 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 267
Query: 196 EGILIGVGEGSL 207
+ G G+
Sbjct: 268 SMSMAAAGGGAY 279
>gi|154183821|gb|ABS70762.1| Hoxc3a [Haplochromis burtoni]
Length = 276
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT FTN QL ELEKEFHF+ YL R RR+E+A+ LQL + QVKIWFQNRRM+ KK K G
Sbjct: 123 RTAFTNNQLLELEKEFHFSPYLCRPRRLEMAAGLQLTDRQVKIWFQNRRMRYKKEQKYGK 182
Query: 199 LIGVGEGSLMGAQGSS 214
+ + + + SS
Sbjct: 183 MTSLSQLATCNLSSSS 198
>gi|255742479|gb|ACU32591.1| homeobox protein HoxD2 [Callorhinchus milii]
Length = 356
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFH+N+YL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 128 RTTYTNTQLLELEKEFHYNRYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 182
>gi|301614396|ref|XP_002936695.1| PREDICTED: homeobox protein Hox-C5-like [Xenopus (Silurana)
tropicalis]
Length = 224
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 160 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDTK 217
>gi|47228654|emb|CAG07386.1| unnamed protein product [Tetraodon nigroviridis]
Length = 482
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----R 193
RT++T Q ELEKEFHFN+YL+R RRIEIA L LNE Q+KIWFQNRRMK KK +
Sbjct: 66 SRTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHNLCLNERQIKIWFQNRRMKWKKDSKIK 125
Query: 194 IKEGILIGVGEGS---LMGAQGSSPNGGL 219
+K+ L+ + E + SP+ G+
Sbjct: 126 VKDCWLLLIWERKGFVALRMHNLSPDCGV 154
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 45/55 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 375 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHALVLSERQIKIWFQNRRMKWKK 429
>gi|81673924|gb|AAI09945.1| Homeobox A4 [Bos taurus]
Length = 253
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 152 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHKLCLSERQVKIWFQNRRMKWKK 205
>gi|148228967|ref|NP_001079291.1| homeobox protein Hox-C5 [Xenopus laevis]
gi|115527869|gb|AAI24881.1| Hoxc5-A protein [Xenopus laevis]
Length = 226
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 162 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDTK 219
>gi|391337014|ref|XP_003742869.1| PREDICTED: uncharacterized protein LOC100904659 [Metaseiulus
occidentalis]
Length = 330
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
R +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK +++
Sbjct: 230 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKAKKESKLQN 289
Query: 197 GILIGVG 203
G++ +G
Sbjct: 290 GLIPSMG 296
>gi|327263834|ref|XP_003216722.1| PREDICTED: homeobox protein Hox-C4-like [Anolis carolinensis]
Length = 283
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 180 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 239
Query: 193 --RIKEGILIGVGEGSLMGAQGSS 214
+++ GSL A ++
Sbjct: 240 NTKVRSTAPANSSTGSLPAAPSNA 263
>gi|219870099|gb|ACL50280.1| homeobox protein Hoxb-4 [Xenopus laevis]
Length = 230
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 81 VKGEIGVTKVQIPSELSPLGV-----HPHPTSPSTDYTTPLTALKYP--PPAALSQHQSL 133
V GE + +P+ P H HP SP D + YP A +S+ S
Sbjct: 80 VPGEKAHLEPHMPTSSPPSCSLKSSEHKHPDSPEQD------PVVYPWMKKAHISKATST 133
Query: 134 LNNS----GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMK 189
++ RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L+L+E Q+KIWFQNRRMK
Sbjct: 134 YSDGEAKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMK 193
Query: 190 QKKRIK-EGILIGVGEGSLMGAQGSSPN 216
KK K I + G SPN
Sbjct: 194 WKKDHKLPNTKIKSNPSVNLQIAGGSPN 221
>gi|15825440|gb|AAL09697.1| cephalothorax [Tribolium castaneum]
Length = 268
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 167 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 226
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 227 RRMKWKKEHKMASM 240
>gi|432881691|ref|XP_004073904.1| PREDICTED: homeobox protein Hox-A5-like [Oryzias latipes]
Length = 302
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIK 195
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 229 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 288
Query: 196 EGILIGVGEGSL 207
+ G G+
Sbjct: 289 SMSMAAAGGGAY 300
>gi|443689502|gb|ELT91876.1| hypothetical protein CAPTEDRAFT_94911, partial [Capitella teleta]
Length = 92
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 116 LTALKYPPPAALSQHQSLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASV 171
LT+ PPP + S + ++ RT +TN QL ELEKEFHFNKYL R RRIEIA+
Sbjct: 11 LTSGVAPPPTSCGNTGSSVASNHPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAAS 70
Query: 172 LQLNETQVKIWFQNRRMKQKKR 193
L L E QVK+WFQNRRMK K++
Sbjct: 71 LDLTERQVKVWFQNRRMKFKRQ 92
>gi|410896780|ref|XP_003961877.1| PREDICTED: homeobox protein Hox-D3a-like [Takifugu rubripes]
Length = 393
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 164 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 220
>gi|443689507|gb|ELT91881.1| hypothetical protein CAPTEDRAFT_168122 [Capitella teleta]
Length = 298
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 46/65 (70%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK
Sbjct: 205 NKRTRTSYTRHQTLELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQNRRMKWKKEH 264
Query: 195 KEGIL 199
K L
Sbjct: 265 KLAHL 269
>gi|432112557|gb|ELK35273.1| Homeobox protein Hox-C5 [Myotis davidii]
Length = 222
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|4322038|gb|AAD15929.1| homeobox protein [Petromyzon marinus]
Length = 303
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T Q ELEKEFHFN+YLTR RRIE+A+ L L+E Q+KIWFQNRRMK KK K +
Sbjct: 231 RTAYTRYQTLELEKEFHFNRYLTRRRRIEVANALCLSERQIKIWFQNRRMKWKKDNKLKS 290
Query: 198 ILIGVGEGSL 207
+ + G+G +
Sbjct: 291 LSMAAGQGGM 300
>gi|426224342|ref|XP_004006330.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-C5 [Ovis
aries]
Length = 227
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 163 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 220
>gi|344266087|ref|XP_003405112.1| PREDICTED: homeobox protein Hox-C5-like [Loxodonta africana]
Length = 222
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|242011836|ref|XP_002426650.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510814|gb|EEB13912.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 356
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 254 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 313
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 314 RRMKWKKEHKMASM 327
>gi|195038415|ref|XP_001990655.1| GH19477 [Drosophila grimshawi]
gi|193894851|gb|EDV93717.1| GH19477 [Drosophila grimshawi]
Length = 576
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 324 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 383
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 384 RRMKWKKEHK 393
>gi|344285933|ref|XP_003414714.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3-like
[Loxodonta africana]
Length = 427
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQN RMK KK K
Sbjct: 190 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNXRMKYKKDQK 247
>gi|34484447|gb|AAQ72846.1| HoxB3b [Sphoeroides nephelus]
Length = 182
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T+ QL ELEKEFHF++YL R RR+E+AS+L L E Q+KIWFQNRRMKQKK
Sbjct: 17 RTAYTSAQLVELEKEFHFSRYLCRPRRVEMASLLNLQERQIKIWFQNRRMKQKK 70
>gi|28300405|gb|AAO37644.1| transcription factor Hoxa1 [Polyodon spathula]
Length = 87
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 43/46 (93%)
Query: 154 FHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
FHF+ YLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG++
Sbjct: 1 FHFSNYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLI 46
>gi|28376623|ref|NP_783857.1| homeobox protein Hox-C5 [Mus musculus]
gi|157822081|ref|NP_001101586.1| homeo box C5 [Rattus norvegicus]
gi|149714970|ref|XP_001504605.1| PREDICTED: homeobox protein Hox-C5-like [Equus caballus]
gi|297692045|ref|XP_002823377.1| PREDICTED: homeobox protein Hox-C5 [Pongo abelii]
gi|311255483|ref|XP_003126250.1| PREDICTED: homeobox protein Hox-C5-like [Sus scrofa]
gi|332207730|ref|XP_003252949.1| PREDICTED: homeobox protein Hox-C5 [Nomascus leucogenys]
gi|335287896|ref|XP_003355471.1| PREDICTED: homeobox protein Hox-C5-like [Sus scrofa]
gi|410964589|ref|XP_003988836.1| PREDICTED: homeobox protein Hox-C5 [Felis catus]
gi|114152822|sp|P32043.3|HXC5_MOUSE RecName: Full=Homeobox protein Hox-C5; AltName: Full=Homeobox
protein Hox-3.4; AltName: Full=Homeobox protein Hox-6.2
gi|26347351|dbj|BAC37324.1| unnamed protein product [Mus musculus]
gi|109731984|gb|AAI15552.1| Homeo box C5 [Mus musculus]
gi|109731987|gb|AAI15553.1| Homeo box C5 [Mus musculus]
gi|148671995|gb|EDL03942.1| homeobox C5 [Mus musculus]
gi|149031889|gb|EDL86801.1| homeo box C5 (predicted) [Rattus norvegicus]
gi|355564297|gb|EHH20797.1| Homeobox protein Hox-3D [Macaca mulatta]
gi|355786155|gb|EHH66338.1| Homeobox protein Hox-3D [Macaca fascicularis]
Length = 222
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|300797993|ref|NP_001178280.1| homeobox protein Hox-C5 [Bos taurus]
gi|296487931|tpg|DAA30044.1| TPA: homeobox C5-like [Bos taurus]
gi|440900712|gb|ELR51790.1| Homeobox protein Hox-C5 [Bos grunniens mutus]
Length = 222
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|444513900|gb|ELV10485.1| Homeobox protein Hox-C5 [Tupaia chinensis]
Length = 222
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|399984|sp|P31261.1|HXA2_NOTVI RecName: Full=Homeobox protein Hox-A2; AltName: Full=Homeobox
protein Hbox-2.8; Short=NvHbox-2.8
gi|213396|gb|AAA49396.1| homeobox protein, partial [Notophthalmus viridescens]
Length = 90
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 6 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 62
>gi|31205335|ref|XP_311616.1| AGAP004659-PA [Anopheles gambiae str. PEST]
gi|3420834|gb|AAC31944.1| Sex combs reduced homeotic protein [Anopheles gambiae]
gi|30177656|gb|EAA07257.2| AGAP004659-PA [Anopheles gambiae str. PEST]
Length = 372
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 271 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 330
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 331 RRMKWKKEHK 340
>gi|193924|gb|AAA37840.1| homeobox mh19-related protein, partial [Mus musculus]
Length = 210
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 132 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S + RT +T+ QL ELEKEFHFN+Y R RR+E+A++L L+E Q+KIWFQNRRMK K
Sbjct: 37 SAASKRARTAYTSAQLVELEKEFHFNRYFVRPRRVEMANLLNLSERQIKIWFQNRRMKYK 96
Query: 192 KRIK-EGILIGVGEGSLMGA 210
K K +G+ G S G+
Sbjct: 97 KDQKAKGLASSSGGPSPAGS 116
>gi|195152067|ref|XP_002016960.1| GL22040 [Drosophila persimilis]
gi|194112017|gb|EDW34060.1| GL22040 [Drosophila persimilis]
Length = 472
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 326 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 385
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 386 RRMKWKKEHK 395
>gi|110282969|sp|Q9YGT6.2|HXA5A_DANRE RecName: Full=Homeobox protein Hox-A5a
Length = 265
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 194 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDNKLKS 253
Query: 197 GILIGVGEG 205
+ G G
Sbjct: 254 MNMAAAGSG 262
>gi|16508129|gb|AAL17914.1| homeobox protein hox4x [Petromyzon marinus]
Length = 381
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 45/57 (78%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
N RT +T Q ELEKEFHFN+YLTR RR+E+A+ L L+E Q+KIWFQNRRMK KK
Sbjct: 295 NGARTAYTRHQALELEKEFHFNRYLTRRRRVEVANALCLSERQIKIWFQNRRMKWKK 351
>gi|395756654|ref|XP_002834345.2| PREDICTED: homeobox protein Hox-A7-like [Pongo abelii]
Length = 224
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 92 IPSELSPLGVHPHPTSPSTDYTTPLTALKYPP---PAALSQ--HQSLLNNSGRTNFTNKQ 146
IP+ L PLG P + PS T +PP PAA S H+ L+ GR ++ Q
Sbjct: 46 IPNLLCPLG--PAGSLPSIRQTCSSNRYSHPPKITPAASSPLPHRDLVQG-GRQTYSRYQ 102
Query: 147 LTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
ELEKEF FN YLTR RRIE++ L L E QVKIWFQNRRMK KK
Sbjct: 103 TLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 148
>gi|119370798|sp|Q1KKS7.1|HXD3A_FUGRU RecName: Full=Homeobox protein Hox-D3a
gi|94482852|gb|ABF22467.1| homeobox protein HoxD3a [Takifugu rubripes]
Length = 408
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 179 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 235
>gi|426226610|ref|XP_004007433.1| PREDICTED: homeobox protein Hox-C4 [Ovis aries]
Length = 214
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 109 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 168
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G SL A
Sbjct: 169 NTKVRSAPPAGAAPSSLSAA 188
>gi|395540855|ref|XP_003772366.1| PREDICTED: homeobox protein Hox-C5 [Sarcophilus harrisii]
Length = 222
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|390178649|ref|XP_001359213.3| Scr [Drosophila pseudoobscura pseudoobscura]
gi|388859531|gb|EAL28358.3| Scr [Drosophila pseudoobscura pseudoobscura]
Length = 426
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 324 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 383
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 384 RRMKWKKEHK 393
>gi|255742433|gb|ACU32548.1| homeobox protein HoxA7 [Callorhinchus milii]
Length = 212
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 44/60 (73%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K G
Sbjct: 138 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKETKAG 197
>gi|315419577|gb|ADU15764.1| homeobox protein Hox-D3 [Anas platyrhynchos]
Length = 125
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 41 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 100
Query: 198 ILIG-VGEGSLMGAQGSSPN 216
I+ VG+ S PN
Sbjct: 101 IMHSPVGQSPDRSPPLSGPN 120
>gi|14916597|sp|Q9IA25.1|HXA7_HETFR RecName: Full=Homeobox protein Hox-A7
gi|7271834|gb|AAF44645.1|AF224262_7 HoxA7 [Heterodontus francisci]
Length = 208
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 44/60 (73%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K G
Sbjct: 138 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKETKAG 197
>gi|431921604|gb|ELK18956.1| Homeobox protein Hox-C5 [Pteropus alecto]
Length = 222
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|47229432|emb|CAF99420.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 11/84 (13%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 163 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK----- 217
Query: 198 ILIGVGEGSLMGAQGSSPNGGLYR 221
+ L +S GG+YR
Sbjct: 218 ------DNKLKSMNMASAGGGVYR 235
>gi|254212175|gb|ACT65750.1| Hoxa7 [Leucoraja erinacea]
Length = 208
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 44/60 (73%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K G
Sbjct: 138 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKETKAG 197
>gi|301128873|emb|CBL59337.1| HoxA7 [Scyliorhinus canicula]
Length = 208
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 44/60 (73%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K G
Sbjct: 138 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKETKAG 197
>gi|3417236|emb|CAA64694.1| homeodomain protein [Girardia tigrina]
Length = 205
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFNKYLTR RR EIA LQL+E+QVKIWFQNRRMK KK
Sbjct: 84 NRTAYTRQQILELEKEFHFNKYLTRKRRNEIAQSLQLSESQVKIWFQNRRMKWKK 138
>gi|24119205|ref|NP_571615.1| homeobox protein Hox-A5a [Danio rerio]
gi|4322062|gb|AAD15940.1| homeobox protein [Danio rerio]
gi|190337204|gb|AAI62990.1| Homeo box A5a [Danio rerio]
gi|190338205|gb|AAI62975.1| Homeo box A5a [Danio rerio]
Length = 227
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 156 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDNKLKS 215
Query: 197 GILIGVGEG 205
+ G G
Sbjct: 216 MNMAAAGSG 224
>gi|395835049|ref|XP_003790497.1| PREDICTED: homeobox protein Hox-C5 [Otolemur garnettii]
Length = 222
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|193946|gb|AAA37849.1| Hox-2.8 homeobox protein, partial [Mus musculus]
Length = 72
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K+
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 69
>gi|301776116|ref|XP_002923476.1| PREDICTED: homeobox protein Hox-C5-like [Ailuropoda melanoleuca]
gi|281342178|gb|EFB17762.1| hypothetical protein PANDA_012615 [Ailuropoda melanoleuca]
Length = 222
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|400180326|gb|AFP73294.1| Hoxa5alpha [Polyodon spathula]
Length = 275
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIK 195
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 203 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 262
Query: 196 EGILIGVGE 204
+ G+
Sbjct: 263 SMSMAAAGD 271
>gi|88604720|gb|ABD46731.1| homeobox protein antennapedia [Endeis spinosa]
Length = 203
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 59/114 (51%), Gaps = 23/114 (20%)
Query: 105 PTSPSTDYTTPLTALKYPP-----PAALSQHQSLLNNS------------------GRTN 141
P SPS + L PP P + HQS+ N+ GR
Sbjct: 76 PQSPSALASGGLGGANVPPSPVHSPQMYNHHQSITNSGVLPSPLYPWMRSQFERKRGRQT 135
Query: 142 FTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
+T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 136 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 189
>gi|351706133|gb|EHB09052.1| Homeobox protein Hox-C5 [Heterocephalus glaber]
Length = 222
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|71896405|ref|NP_001025517.1| homeobox protein Hox-A4 [Gallus gallus]
gi|363730020|ref|XP_003640746.1| PREDICTED: homeobox protein Hox-A4-like [Gallus gallus]
gi|123228|sp|P17277.1|HXA4_CHICK RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; Short=Chox-1.4
gi|63219|emb|CAA36896.1| unnamed protein product [Gallus gallus]
Length = 309
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 212 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 266
>gi|359754107|gb|AEV59528.1| HOXC5 [Macropus eugenii]
Length = 222
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|348581049|ref|XP_003476290.1| PREDICTED: homeobox protein Hox-C5-like [Cavia porcellus]
Length = 222
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|269931713|gb|ACZ54376.1| homeobox D3 [Monodelphis domestica]
Length = 157
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 48 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 107
Query: 198 IL 199
I+
Sbjct: 108 IM 109
>gi|328778410|ref|XP_001120045.2| PREDICTED: hypothetical protein LOC724252 [Apis mellifera]
Length = 565
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 332 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 388
>gi|11321638|ref|NP_061826.1| homeobox protein Hox-C5 [Homo sapiens]
gi|397521949|ref|XP_003831045.1| PREDICTED: homeobox protein Hox-C5 [Pan paniscus]
gi|232262|sp|Q00444.1|HXC5_HUMAN RecName: Full=Homeobox protein Hox-C5; AltName: Full=Homeobox
protein CP11; AltName: Full=Homeobox protein Hox-3D
gi|32388|emb|CAA43894.1| homeoprotein HOX3D [Homo sapiens]
gi|119617154|gb|EAW96748.1| homeobox C5 [Homo sapiens]
gi|146327466|gb|AAI41644.1| Homeobox C5 [synthetic construct]
gi|147897703|gb|AAI40273.1| Homeobox C5 [synthetic construct]
gi|208966502|dbj|BAG73265.1| homeobox C5 [synthetic construct]
gi|410256620|gb|JAA16277.1| homeobox C5 [Pan troglodytes]
Length = 222
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|350405520|ref|XP_003487460.1| PREDICTED: hypothetical protein LOC100747283 [Bombus impatiens]
Length = 543
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 329 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 385
>gi|313234711|emb|CBY10664.1| unnamed protein product [Oikopleura dioica]
Length = 154
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 47/63 (74%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N RT +T Q ELEKEFHFN+YLTR RRIEIA+ LQL+E QVKIWFQNRRMK KK
Sbjct: 86 NKRIRTAYTRHQTLELEKEFHFNRYLTRKRRIEIATTLQLSERQVKIWFQNRRMKWKKEH 145
Query: 195 KEG 197
K
Sbjct: 146 KSN 148
>gi|193909|gb|AAA37834.1| homeobox protein, partial [Mus musculus]
Length = 105
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++ +
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQ 72
>gi|426372800|ref|XP_004053304.1| PREDICTED: homeobox protein Hox-C5 [Gorilla gorilla gorilla]
Length = 222
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|403288103|ref|XP_003935254.1| PREDICTED: homeobox protein Hox-A4, partial [Saimiri boliviensis
boliviensis]
Length = 163
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 60 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 113
>gi|340727743|ref|XP_003402196.1| PREDICTED: hypothetical protein LOC100642982 [Bombus terrestris]
Length = 543
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 329 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 385
>gi|355786156|gb|EHH66339.1| Homeobox protein Hox-3E [Macaca fascicularis]
Length = 206
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 101 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 160
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G +L A
Sbjct: 161 NTKVRSAPPAGAAPSTLSAA 180
>gi|187608357|ref|NP_001119917.1| homeobox protein Hox-D4a [Danio rerio]
gi|190337184|gb|AAI62966.1| Homeo box D4a [Danio rerio]
gi|190338908|gb|AAI62983.1| Homeo box D4a [Danio rerio]
gi|190339776|gb|AAI63059.1| Hoxd4a protein [Danio rerio]
Length = 256
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-- 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 169 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLP 228
Query: 196 --EGILIGVGEGSLMGAQGSS 214
+G VG AQ S
Sbjct: 229 NTKGRSASVGNQHAQHAQKDS 249
>gi|354479684|ref|XP_003502039.1| PREDICTED: homeobox protein Hox-A4-like [Cricetulus griseus]
Length = 138
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 36 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 90
>gi|76825416|gb|AAI07173.1| Hoxa4 protein [Mus musculus]
Length = 187
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 8/71 (11%)
Query: 130 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKI 181
H S +N+S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKI
Sbjct: 69 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 128
Query: 182 WFQNRRMKQKK 192
WFQNRRMK KK
Sbjct: 129 WFQNRRMKWKK 139
>gi|37625188|gb|AAQ95789.1| HOXD4 [Xenopus laevis]
Length = 218
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 131 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSECQIKIWFQNRRMKWKKDHK 188
>gi|158081778|ref|NP_001103354.1| homeobox protein Hox-C4 [Rattus norvegicus]
gi|149031888|gb|EDL86800.1| homeo box C4 (mapped) [Rattus norvegicus]
Length = 264
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 218
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G +L A
Sbjct: 219 NTKVRSAPPAGAAPSTLSAA 238
>gi|312125839|gb|ADQ27863.1| fushi tarazu [Callosobruchus maculatus]
Length = 368
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 116 LTALK---YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVL 172
LTA + YP + + H + N R +T Q ELEKEFHFNKYLTR RRIEIA L
Sbjct: 200 LTAAQNNFYPWMRSSNDHTAKGNKRTRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHTL 259
Query: 173 QLNETQVKIWFQNRRMKQKKRIKEGI 198
L E Q+KIWFQNRRMK KK K +
Sbjct: 260 CLTERQIKIWFQNRRMKAKKGDKLAV 285
>gi|225581119|gb|ACN94690.1| GA10228 [Drosophila miranda]
Length = 345
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 243 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 302
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 303 RRMKWKKEHK 312
>gi|224045300|ref|XP_002194850.1| PREDICTED: homeobox protein Hox-A4 [Taeniopygia guttata]
Length = 306
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 210 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 264
>gi|195110413|ref|XP_001999776.1| GI24715 [Drosophila mojavensis]
gi|193916370|gb|EDW15237.1| GI24715 [Drosophila mojavensis]
Length = 418
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 316 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 375
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 376 RRMKWKKEHK 385
>gi|82621583|gb|ABB86463.1| anthox8a-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|83728469|gb|ABC41924.1| anthox8b-ANTP class homeobox protein [Nematostella vectensis]
gi|110338991|gb|ABG67759.1| HOXDa, partial [Nematostella vectensis]
gi|110338993|gb|ABG67760.1| HOXDb, partial [Nematostella vectensis]
Length = 60
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT++TNKQL ELEKEFHFNKYL +RR EI+ LQL E QVKIWFQNRRMK KK
Sbjct: 5 RTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKIWFQNRRMKWKK 58
>gi|112983646|ref|NP_001037339.1| sex combs reduced homolog [Bombyx mori]
gi|4589701|dbj|BAA76868.1| Scr [Bombyx mori]
Length = 356
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 255 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 314
Query: 186 RRMKQKKRIK 195
RRMK KK K
Sbjct: 315 RRMKWKKEHK 324
>gi|156387518|ref|XP_001634250.1| predicted protein [Nematostella vectensis]
gi|156221331|gb|EDO42187.1| predicted protein [Nematostella vectensis]
Length = 63
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT++TNKQL ELEKEFHFNKYL +RR EI+ LQL E QVKIWFQNRRMK KK
Sbjct: 5 RTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKIWFQNRRMKWKK 58
>gi|440899267|gb|ELR50596.1| Homeobox protein Hox-A7, partial [Bos grunniens mutus]
Length = 237
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 133 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 191
>gi|395830950|ref|XP_003788575.1| PREDICTED: homeobox protein Hox-A7 [Otolemur garnettii]
gi|202070729|gb|ACH95317.1| homeobox A7 (predicted) [Otolemur garnettii]
Length = 226
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 133 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 191
>gi|194666358|ref|XP_872865.2| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|297473885|ref|XP_002686901.1| PREDICTED: homeobox protein Hox-A7 [Bos taurus]
gi|296488412|tpg|DAA30525.1| TPA: homeobox A7-like [Bos taurus]
Length = 238
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 133 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 191
>gi|148671994|gb|EDL03941.1| homeobox C4 [Mus musculus]
Length = 262
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 157 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 216
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G +L A
Sbjct: 217 NTKVRSAPPAGAAPSTLSAA 236
>gi|426347610|ref|XP_004041442.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3 [Gorilla
gorilla gorilla]
Length = 427
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMK 189
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+KIWFQNRRMK
Sbjct: 188 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMK 238
>gi|404058|gb|AAA37855.1| includes homeodomain, partial [Mus musculus]
Length = 101
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 17 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 73
Query: 199 LIGVGEGSLMGAQGSSP 215
+G L G SP
Sbjct: 74 ----AKGILHSPAGQSP 86
>gi|1039391|gb|AAA79876.1| homeobox protein [Mus musculus]
Length = 222
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 158 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215
>gi|148234492|ref|NP_001082538.1| homeobox protein Hox-A7 [Xenopus laevis]
gi|123281|sp|P09071.1|HXA7_XENLA RecName: Full=Homeobox protein Hox-A7; AltName: Full=Xhox-36;
AltName: Full=XlHbox-3
gi|537600|gb|AAA49753.1| homeobox protein [Xenopus laevis]
gi|213626867|gb|AAI70290.1| Homeobox protein [Xenopus laevis]
gi|213626991|gb|AAI70546.1| Homeobox protein [Xenopus laevis]
Length = 209
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 125 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 183
>gi|217035833|gb|ACJ74388.1| Hox7 [Branchiostoma lanceolatum]
Length = 236
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFHFNKYLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 161 GRQTYTRYQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 218
>gi|154800435|ref|NP_038581.2| homeobox protein Hox-C4 [Mus musculus]
gi|585281|sp|Q08624.1|HXC4_MOUSE RecName: Full=Homeobox protein Hox-C4; AltName: Full=Homeobox
protein Hox-3.5
gi|385750|gb|AAB27153.1| homeobox [Mus sp.]
gi|416420|dbj|BAA01947.1| Hox 3.5 [Mus musculus]
gi|448269|prf||1916397A Hox3.5 gene
Length = 264
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 218
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G +L A
Sbjct: 219 NTKVRSAPPAGAAPSTLSAA 238
>gi|395519807|ref|XP_003764033.1| PREDICTED: homeobox protein Hox-D4 [Sarcophilus harrisii]
Length = 238
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 150 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|157124731|ref|XP_001660497.1| homeotic antennapedia protein, putative [Aedes aegypti]
gi|108873901|gb|EAT38126.1| AAEL009949-PA [Aedes aegypti]
Length = 370
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 269 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 328
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 329 RRMKWKKEHKMASM 342
>gi|431890742|gb|ELK01621.1| Homeobox protein Hox-B5 [Pteropus alecto]
Length = 269
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIK 195
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 197 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 256
Query: 196 EGILIGVGEG 205
L G
Sbjct: 257 SMSLATAGSA 266
>gi|380028330|ref|XP_003697858.1| PREDICTED: uncharacterized protein LOC100873059 [Apis florea]
Length = 550
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 330 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 386
>gi|224460203|gb|ACN43631.1| sex combs reduced [Rhodnius prolixus]
Length = 338
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 131 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQN 185
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQN
Sbjct: 241 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 300
Query: 186 RRMKQKKRIKEGIL 199
RRMK KK K +
Sbjct: 301 RRMKWKKENKMASM 314
>gi|57106663|ref|XP_543624.1| PREDICTED: homeobox protein Hox-C4 isoform 4 [Canis lupus
familiaris]
gi|73996160|ref|XP_856443.1| PREDICTED: homeobox protein Hox-C4 isoform 8 [Canis lupus
familiaris]
Length = 264
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 218
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G +L A
Sbjct: 219 NTKVRSAPPAGAAPSTLSAA 238
>gi|49169787|ref|NP_989926.1| homeobox protein Hox-A7 [Gallus gallus]
gi|363730028|ref|XP_003640750.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|363730175|ref|XP_003640779.1| PREDICTED: homeobox protein Hox-A7-like [Gallus gallus]
gi|60392400|sp|Q90VZ9.1|HXA7_CHICK RecName: Full=Homeobox protein Hox-A7
gi|15553502|gb|AAL01899.1|AF408695_1 homeodomain transcription factor HoxA-7 [Gallus gallus]
gi|13872753|emb|CAC37629.1| Hoxa-7 protein [Gallus gallus]
Length = 219
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 132 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 190
>gi|157109359|ref|XP_001650635.1| hypothetical protein AaeL_AAEL015111 [Aedes aegypti]
gi|108868445|gb|EAT32670.1| AAEL015111-PA, partial [Aedes aegypti]
Length = 94
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 44/54 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K+
Sbjct: 13 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 66
>gi|325260875|gb|ADZ04665.1| homeobox C5 [Notophthalmus viridescens]
Length = 223
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 47/61 (77%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 159 SRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLK 218
Query: 198 I 198
I
Sbjct: 219 I 219
>gi|309951537|gb|ADO95194.1| antennapedia-like protein [Rhodnius prolixus]
Length = 77
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 50/75 (66%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 60
Query: 199 LIGVGEGSLMGAQGS 213
IG +GS + Q S
Sbjct: 61 DIGANDGSDLSPQTS 75
>gi|187956227|gb|AAI50665.1| Homeo box C4 [Mus musculus]
gi|219841914|gb|AAI44779.1| Hoxc4 protein [Mus musculus]
Length = 264
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 218
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G +L A
Sbjct: 219 NTKVRSAPPAGAAPSTLSAA 238
>gi|359754118|gb|AEV59538.1| HOXD4 [Macropus eugenii]
Length = 238
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 46/58 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 150 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|125489398|gb|ABN42908.1| homeodomain transcription factor Hox3b [Strigamia maritima]
Length = 289
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 45/58 (77%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
N RT +T QL ELEKEFHFN+YL R RR+E+AS+L L E Q+KIWFQNRRMK KK
Sbjct: 80 NKRSRTAYTQSQLVELEKEFHFNRYLCRPRRVELASMLNLTERQIKIWFQNRRMKNKK 137
>gi|449268334|gb|EMC79203.1| Homeobox protein Hox-A7 [Columba livia]
Length = 219
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 132 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 190
>gi|395835051|ref|XP_003790498.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Otolemur garnettii]
gi|395835053|ref|XP_003790499.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Otolemur garnettii]
Length = 264
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK----- 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLP 218
Query: 193 --RIKEGILIGVGEGSLMGA 210
+++ G +L A
Sbjct: 219 NTKVRSAPPAGAAPSTLSAA 238
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,775,015,039
Number of Sequences: 23463169
Number of extensions: 166398987
Number of successful extensions: 641561
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17283
Number of HSP's successfully gapped in prelim test: 1259
Number of HSP's that attempted gapping in prelim test: 619368
Number of HSP's gapped (non-prelim): 22990
length of query: 221
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 84
effective length of database: 9,144,741,214
effective search space: 768158261976
effective search space used: 768158261976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)