Your job contains 1 sequence.
>psy16800
MDEKEERQRRGSRSRKDDENKGGVGGEVGKVGEEMKEKEEERLPGEGREGEERDFSARDV
KTIGIFFCVFSLSSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALK
YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK
IWFQNRRMKQKKRIKEGILIGVGEGSLMGAQGSSPNGGLYR
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16800
(221 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002522 - symbol:lab "labial" species:7227 "Drosop... 317 2.8e-29 2
UNIPROTKB|Q08820 - symbol:hoxd1 "Homeobox protein Hox-D1"... 305 3.5e-27 1
UNIPROTKB|F1RZF8 - symbol:HOXD1 "Uncharacterized protein"... 296 3.2e-26 1
UNIPROTKB|P49639 - symbol:HOXA1 "Homeobox protein Hox-A1"... 294 5.2e-26 1
UNIPROTKB|F1NH11 - symbol:HOXB1 "Homeobox protein Hox-B1"... 292 8.4e-26 1
UNIPROTKB|P31259 - symbol:HOXB1 "Homeobox protein Hox-B1"... 292 8.4e-26 1
UNIPROTKB|E1B918 - symbol:HOXA1 "Uncharacterized protein"... 291 1.1e-25 1
UNIPROTKB|E2R5Z1 - symbol:HOXA1 "Uncharacterized protein"... 291 1.1e-25 1
UNIPROTKB|F1SHS9 - symbol:HOXA1 "Uncharacterized protein"... 291 1.1e-25 1
MGI|MGI:96170 - symbol:Hoxa1 "homeobox A1" species:10090 ... 291 1.1e-25 1
UNIPROTKB|G3V6R3 - symbol:Hoxa1 "Homeobox protein Hox-A1"... 291 1.1e-25 1
UNIPROTKB|E1B7N3 - symbol:HOXD1 "Uncharacterized protein"... 289 1.8e-25 1
MGI|MGI:96201 - symbol:Hoxd1 "homeobox D1" species:10090 ... 289 1.8e-25 1
RGD|1309179 - symbol:Hoxd1 "homeo box D1" species:10116 "... 289 1.8e-25 1
UNIPROTKB|E2QT64 - symbol:HOXB1 "Uncharacterized protein"... 285 4.6e-25 1
ZFIN|ZDB-GENE-000823-5 - symbol:hoxa1a "homeo box A1a" sp... 285 4.6e-25 1
UNIPROTKB|P14653 - symbol:HOXB1 "Homeobox protein Hox-B1"... 283 7.6e-25 1
MGI|MGI:96182 - symbol:Hoxb1 "homeobox B1" species:10090 ... 281 1.2e-24 1
ZFIN|ZDB-GENE-990415-101 - symbol:hoxb1a "homeo box B1a" ... 279 2.0e-24 1
UNIPROTKB|E1BFZ7 - symbol:HOXB1 "Uncharacterized protein"... 278 2.6e-24 1
UNIPROTKB|J9NYN6 - symbol:HOXD1 "Uncharacterized protein"... 278 2.6e-24 1
ZFIN|ZDB-GENE-000822-2 - symbol:hoxc1a "homeo box C1a" sp... 277 3.3e-24 1
ZFIN|ZDB-GENE-980526-290 - symbol:hoxb1b "homeo box B1b" ... 277 3.3e-24 1
UNIPROTKB|F1RWG8 - symbol:LOC100521817 "Uncharacterized p... 276 4.2e-24 1
UNIPROTKB|G3V737 - symbol:Hoxb1 "Homeo box B1 (Predicted)... 275 5.3e-24 1
UNIPROTKB|Q9GZZ0 - symbol:HOXD1 "Homeobox protein Hox-D1"... 273 8.7e-24 1
RGD|2812 - symbol:Hoxa1 "homeo box A1" species:10116 "Rat... 273 8.7e-24 1
WB|WBGene00000437 - symbol:ceh-13 species:6239 "Caenorhab... 227 3.4e-23 2
UNIPROTKB|E1BQ69 - symbol:HOXA1 "Uncharacterized protein"... 266 4.8e-23 1
UNIPROTKB|O43365 - symbol:HOXA3 "Homeobox protein Hox-A3"... 213 2.0e-20 2
MGI|MGI:96175 - symbol:Hoxa3 "homeobox A3" species:10090 ... 213 6.6e-20 2
RGD|1561431 - symbol:Hoxa3 "homeobox A3" species:10116 "R... 213 6.7e-20 2
UNIPROTKB|O93353 - symbol:HOXA3 "Homeobox protein Hox-A3"... 211 7.2e-20 2
UNIPROTKB|F1RZG0 - symbol:HOXD4 "Uncharacterized protein"... 203 7.3e-20 2
UNIPROTKB|Q08DG7 - symbol:HOXA3 "Homeobox protein Hox-A3"... 213 8.2e-20 2
UNIPROTKB|J9NWE8 - symbol:HOXA3 "Uncharacterized protein"... 213 1.0e-19 2
UNIPROTKB|F1SHT1 - symbol:HOXA3 "Uncharacterized protein"... 213 1.7e-19 2
UNIPROTKB|A7MBD6 - symbol:HOXD4 "Uncharacterized protein"... 203 1.9e-19 2
ZFIN|ZDB-GENE-980526-214 - symbol:hoxd4a "homeo box D4a" ... 204 3.1e-19 2
UNIPROTKB|E1U314 - symbol:Hoxa5 "Uncharacterized protein"... 198 3.1e-19 2
UNIPROTKB|P31249 - symbol:HOXD3 "Homeobox protein Hox-D3"... 210 3.2e-19 2
ZFIN|ZDB-GENE-000823-9 - symbol:hoxa5a "homeo box A5a" sp... 206 3.9e-19 2
UNIPROTKB|F1NMG4 - symbol:LOC100858374 "Uncharacterized p... 204 3.9e-19 2
UNIPROTKB|P17277 - symbol:HOXA4 "Homeobox protein Hox-A4"... 204 3.9e-19 2
FB|FBgn0000014 - symbol:abd-A "abdominal A" species:7227 ... 199 5.0e-19 3
UNIPROTKB|F1NLW0 - symbol:LOC100858514 "Uncharacterized p... 206 5.0e-19 2
UNIPROTKB|Q90VZ9 - symbol:HOXA7 "Homeobox protein Hox-A7"... 206 5.0e-19 2
UNIPROTKB|D4A426 - symbol:100365058 "Homeo box B2 (Predic... 211 6.1e-19 2
UNIPROTKB|E2QT40 - symbol:HOXB6 "Uncharacterized protein"... 199 6.4e-19 2
UNIPROTKB|F6UVZ9 - symbol:HOXB6 "Uncharacterized protein"... 199 6.4e-19 2
UNIPROTKB|F1RWG1 - symbol:HOXB6 "Uncharacterized protein"... 199 6.4e-19 2
MGI|MGI:96187 - symbol:Hoxb6 "homeobox B6" species:10090 ... 199 6.4e-19 2
RGD|1562142 - symbol:Hoxb6 "homeo box B6" species:10116 "... 199 6.4e-19 2
UNIPROTKB|E2RGV4 - symbol:HOXD3 "Uncharacterized protein"... 208 8.6e-19 2
UNIPROTKB|Q2HJ67 - symbol:HOXA5 "Homeobox protein Hox-A5"... 198 1.0e-18 2
UNIPROTKB|E2R5W8 - symbol:HOXA5 "Uncharacterized protein"... 198 1.0e-18 2
UNIPROTKB|F1P4V0 - symbol:F1P4V0 "Uncharacterized protein... 225 1.1e-18 1
MGI|MGI:96207 - symbol:Hoxd3 "homeobox D3" species:10090 ... 208 1.1e-18 2
UNIPROTKB|H9L183 - symbol:HOXB7 "Uncharacterized protein"... 198 1.3e-18 2
UNIPROTKB|P17509 - symbol:HOXB6 "Homeobox protein Hox-B6"... 199 1.7e-18 2
UNIPROTKB|Q00056 - symbol:HOXA4 "Homeobox protein Hox-A4"... 204 1.7e-18 2
UNIPROTKB|P13544 - symbol:HOXD1 "Homeobox protein Hox-D1"... 223 1.7e-18 1
UNIPROTKB|E1BZJ6 - symbol:HOXB5 "Homeobox protein Hox-B5"... 200 2.1e-18 2
UNIPROTKB|P52945 - symbol:PDX1 "Pancreas/duodenum homeobo... 190 2.1e-18 2
ZFIN|ZDB-GENE-000823-6 - symbol:hoxb5b "homeo box B5b" sp... 198 2.7e-18 2
UNIPROTKB|F1MD21 - symbol:HOXA2 "Homeobox protein Hox-A2"... 224 2.8e-18 1
UNIPROTKB|Q0VCS4 - symbol:HOXA2 "Homeobox protein Hox-A2"... 224 2.8e-18 1
UNIPROTKB|F1RZF9 - symbol:HOXD3 "Uncharacterized protein"... 208 3.0e-18 2
UNIPROTKB|E1BQ67 - symbol:HOXB5 "Homeobox protein Hox-B5"... 198 3.4e-18 2
RGD|62387 - symbol:Pdx1 "pancreatic and duodenal homeobox... 189 3.4e-18 2
UNIPROTKB|Q08727 - symbol:HOXA2 "Homeobox protein Hox-A2"... 223 3.7e-18 1
UNIPROTKB|E1C2J1 - symbol:PDX1 "Uncharacterized protein" ... 187 5.5e-18 2
UNIPROTKB|E1BBQ5 - symbol:PDX1 "Uncharacterized protein" ... 187 5.5e-18 2
UNIPROTKB|E1B856 - symbol:HOXD3 "Uncharacterized protein"... 208 6.1e-18 2
UNIPROTKB|E2RI92 - symbol:PDX1 "Pancreatic and duodenum h... 192 7.0e-18 2
UNIPROTKB|F1RSW4 - symbol:PDX1 "Uncharacterized protein" ... 187 7.0e-18 2
ZFIN|ZDB-GENE-990415-103 - symbol:hoxb2a "homeo box B2a" ... 221 9.2e-18 1
UNIPROTKB|P17483 - symbol:HOXB4 "Homeobox protein Hox-B4"... 216 9.5e-18 1
UNIPROTKB|F1RWG5 - symbol:HOXB4 "Uncharacterized protein"... 216 9.5e-18 1
UNIPROTKB|O43364 - symbol:HOXA2 "Homeobox protein Hox-A2"... 219 1.1e-17 1
UNIPROTKB|F1SHT0 - symbol:HOXA2 "Uncharacterized protein"... 219 1.1e-17 1
UNIPROTKB|F1NH10 - symbol:HOXB3 "Homeobox protein Hox-B3"... 218 1.4e-17 1
UNIPROTKB|F1N257 - symbol:HOXB4 "Homeobox protein Hox-B4"... 214 1.6e-17 1
UNIPROTKB|Q08DG5 - symbol:HOXB4 "Homeobox protein Hox-B4"... 214 1.6e-17 1
UNIPROTKB|P23682 - symbol:HOXB3 "Homeobox protein Hox-B3"... 218 1.8e-17 1
MGI|MGI:96185 - symbol:Hoxb4 "homeobox B4" species:10090 ... 213 2.0e-17 1
MGI|MGI:106587 - symbol:Msx3 "homeobox, msh-like 3" speci... 212 2.5e-17 1
RGD|1560113 - symbol:Hoxb4 "homeo box B4" species:10116 "... 212 2.5e-17 1
ZFIN|ZDB-GENE-990415-98 - symbol:hoxa2b "homeo box A2b" s... 215 2.6e-17 1
MGI|MGI:96174 - symbol:Hoxa2 "homeobox A2" species:10090 ... 215 2.9e-17 1
RGD|2813 - symbol:Hoxa2 "homeo box A2" species:10116 "Rat... 215 2.9e-17 1
UNIPROTKB|P31246 - symbol:Hoxa2 "Homeobox protein Hox-A2"... 215 2.9e-17 1
UNIPROTKB|E2R5Y1 - symbol:HOXA2 "Uncharacterized protein"... 215 3.0e-17 1
UNIPROTKB|A4FUC1 - symbol:HOXC4 "HOXC4 protein" species:9... 211 3.2e-17 1
UNIPROTKB|E2QSM9 - symbol:HOXC4 "Uncharacterized protein"... 211 3.2e-17 1
UNIPROTKB|E2QT60 - symbol:HOXB2 "Uncharacterized protein"... 211 3.2e-17 1
UNIPROTKB|P09017 - symbol:HOXC4 "Homeobox protein Hox-C4"... 211 3.2e-17 1
UNIPROTKB|F1SR58 - symbol:HOXC4 "Uncharacterized protein"... 211 3.2e-17 1
MGI|MGI:96195 - symbol:Hoxc4 "homeobox C4" species:10090 ... 211 3.2e-17 1
RGD|2319509 - symbol:Hoxb2 "homeobox B2" species:10116 "R... 211 3.2e-17 1
WARNING: Descriptions of 1326 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0002522 [details] [associations]
symbol:lab "labial" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IPI] [GO:0007420 "brain development" evidence=IGI;IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS;TAS] [GO:0007494
"midgut development" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=TAS] [GO:0001709 "cell fate
determination" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0035284 "brain segmentation"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0007494 GO:GO:0009790 EMBL:AE001572 GO:GO:0001709
GO:GO:0035284 eggNOG:NOG236971 KO:K09301 EMBL:X13103 EMBL:X13104
EMBL:X13105 EMBL:X13106 EMBL:AY095089 EMBL:M13570 PIR:A30168
PIR:S01164 RefSeq:NP_476613.1 UniGene:Dm.4752
ProteinModelPortal:P10105 SMR:P10105 DIP:DIP-59868N STRING:P10105
GeneID:40817 KEGG:dme:Dmel_CG1264 UCSC:CG1264-RA CTD:40817
FlyBase:FBgn0002522 HOGENOM:HOG000263879 InParanoid:P10105
OMA:ISSENGM OrthoDB:EOG4D7WP6 GenomeRNAi:40817 NextBio:820739
Bgee:P10105 GermOnline:CG1264 Uniprot:P10105
Length = 635
Score = 317 (116.6 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 59/65 (90%), Positives = 64/65 (98%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQVKIWFQNRRMKQKKR+
Sbjct: 507 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRV 566
Query: 195 KEGIL 199
KEG++
Sbjct: 567 KEGLI 571
Score = 38 (18.4 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 78 LF-PVKGEIGVT-KVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS 128
LF P E G+T + +PL HP SP+ Y + Y AA++
Sbjct: 118 LFSPSAAEYGITTSTTTGNPGTPL--HPSSHSPADSYYESDSVHSYYATAAVA 168
>UNIPROTKB|Q08820 [details] [associations]
symbol:hoxd1 "Homeobox protein Hox-D1" species:8355
"Xenopus laevis" [GO:0030902 "hindbrain development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030902 KO:K09301 HOVERGEN:HBG006089 CTD:3231 EMBL:M63873
EMBL:L25857 EMBL:BC106402 EMBL:X62052 PIR:A40357
RefSeq:NP_001084035.1 UniGene:Xl.53491 ProteinModelPortal:Q08820
SMR:Q08820 GeneID:399267 KEGG:xla:399267 Xenbase:XB-GENE-482735
Uniprot:Q08820
Length = 300
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 66/109 (60%), Positives = 79/109 (72%)
Query: 97 SPLGVHPHPTSPSTD-YTTPLTALKY---PPPAALSQHQSLLNN--SGRTNFTNKQLTEL 150
SP G +P P SP++D Y + +K PP ++ + + + RTNFT KQLTEL
Sbjct: 157 SP-GTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLTEL 215
Query: 151 EKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
EKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG L
Sbjct: 216 EKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKKREREGTL 264
>UNIPROTKB|F1RZF8 [details] [associations]
symbol:HOXD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09301 OMA:GDGAFVS
EMBL:CU570829 RefSeq:XP_001925052.2 UniGene:Ssc.95040
Ensembl:ENSSSCT00000017407 GeneID:100157662 KEGG:ssc:100157662
Uniprot:F1RZF8
Length = 327
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 70/146 (47%), Positives = 91/146 (62%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ LG +P SP++ + ++ P + L+++ +
Sbjct: 169 PADGHSGAFQTASPA----LGAYPTSASPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGA 224
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 225 ASPPSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 284
Query: 192 KRIKEGILIGVGE-GSL-MGAQGSSP 215
KR +EG+L+ SL + G+SP
Sbjct: 285 KREREGLLLSATPVASLQLPLSGTSP 310
>UNIPROTKB|P49639 [details] [associations]
symbol:HOXA1 "Homeobox protein Hox-A1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021571 "rhombomere 5 development" evidence=IEA] [GO:0021612
"facial nerve structural organization" evidence=IEA] [GO:0021754
"facial nucleus development" evidence=IEA] [GO:0021953 "central
nervous system neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IDA] [GO:0007634
"optokinetic behavior" evidence=IDA] [GO:0042473 "outer ear
morphogenesis" evidence=IDA] [GO:0007605 "sensory perception of
sound" evidence=IDA] [GO:0050890 "cognition" evidence=IDA]
[GO:0050795 "regulation of behavior" evidence=IDA] [GO:0021599
"abducens nerve formation" evidence=IMP] [GO:0048839 "inner ear
development" evidence=IMP] [GO:0090103 "cochlea morphogenesis"
evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
[GO:0060876 "semicircular canal formation" evidence=IMP]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0048702 "embryonic neurocranium morphogenesis" evidence=IMP]
[GO:0048844 "artery morphogenesis" evidence=IMP] [GO:0060840
"artery development" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0050795 GO:GO:0050890 EMBL:CH471073 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 EMBL:CH236948
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
GO:GO:0021754 eggNOG:NOG236971 KO:K09301 HOGENOM:HOG000247020
HOVERGEN:HBG006089 OrthoDB:EOG47H5QN EMBL:U10421 EMBL:AK313514
EMBL:AC004079 EMBL:BC032547 EMBL:U37431 EMBL:S79869 EMBL:S79871
EMBL:S79910 IPI:IPI00027694 IPI:IPI00218317 IPI:IPI00218318
PIR:G01448 RefSeq:NP_005513.1 RefSeq:NP_705873.2 UniGene:Hs.67397
ProteinModelPortal:P49639 SMR:P49639 IntAct:P49639
MINT:MINT-1437157 STRING:P49639 PhosphoSite:P49639 DMDM:6166216
PRIDE:P49639 DNASU:3198 Ensembl:ENST00000343060 GeneID:3198
KEGG:hsa:3198 UCSC:uc003syd.3 UCSC:uc003sye.3 UCSC:uc022aao.1
CTD:3198 GeneCards:GC07M027099 HGNC:HGNC:5099 HPA:HPA004933
MIM:142955 MIM:601536 neXtProt:NX_P49639 Orphanet:69739
Orphanet:69737 PharmGKB:PA29376 InParanoid:P49639 BindingDB:P49639
ChEMBL:CHEMBL4950 GenomeRNAi:3198 NextBio:12718 ArrayExpress:P49639
Bgee:P49639 CleanEx:HS_HOXA1 Genevestigator:P49639
GermOnline:ENSG00000105991 GO:GO:0021599 GO:GO:0021953
GO:GO:0048702 GO:GO:0007634 GO:GO:0021569 GO:GO:0021570
GO:GO:0060876 Uniprot:P49639
Length = 335
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 67/116 (57%), Positives = 78/116 (67%)
Query: 94 SELSPLGV-HPHPT-SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
+ LSPL H SP+++ ++P + PP L N+ RTNFT
Sbjct: 178 NSLSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYLGQPNAVRTNFT 237
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 238 TKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 293
>UNIPROTKB|F1NH11 [details] [associations]
symbol:HOXB1 "Homeobox protein Hox-B1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0021571
"rhombomere 5 development" evidence=IEA] [GO:0021612 "facial nerve
structural organization" evidence=IEA] [GO:0021754 "facial nucleus
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
OMA:YAICNRG EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
IPI:IPI01017071 Ensembl:ENSGALT00000021933 Uniprot:F1NH11
Length = 307
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 59/79 (74%), Positives = 64/79 (81%)
Query: 122 PPPAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
PP A LL N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQV
Sbjct: 196 PPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 255
Query: 180 KIWFQNRRMKQKKRIKEGI 198
KIWFQNRRMKQKKR KEG+
Sbjct: 256 KIWFQNRRMKQKKREKEGL 274
>UNIPROTKB|P31259 [details] [associations]
symbol:HOXB1 "Homeobox protein Hox-B1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG321520
HOGENOM:HOG000247020 HOVERGEN:HBG006089 OrthoDB:EOG44F69X
EMBL:X68352 EMBL:X68353 IPI:IPI00584134 PIR:A60096 UniGene:Gga.533
ProteinModelPortal:P31259 SMR:P31259 STRING:P31259 PRIDE:P31259
InParanoid:P31259 NextBio:20815965 Uniprot:P31259
Length = 309
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 59/79 (74%), Positives = 64/79 (81%)
Query: 122 PPPAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
PP A LL N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQV
Sbjct: 198 PPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 257
Query: 180 KIWFQNRRMKQKKRIKEGI 198
KIWFQNRRMKQKKR KEG+
Sbjct: 258 KIWFQNRRMKQKKREKEGL 276
>UNIPROTKB|E1B918 [details] [associations]
symbol:HOXA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0090103 "cochlea
morphogenesis" evidence=IEA] [GO:0060876 "semicircular canal
formation" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0050795
"regulation of behavior" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048702 "embryonic neurocranium
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042473 "outer ear morphogenesis" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021754 "facial nucleus development" evidence=IEA] [GO:0021612
"facial nerve structural organization" evidence=IEA] [GO:0021599
"abducens nerve formation" evidence=IEA] [GO:0021571 "rhombomere 5
development" evidence=IEA] [GO:0021570 "rhombomere 4 development"
evidence=IEA] [GO:0021569 "rhombomere 3 development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0050795
GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
GO:GO:0021754 GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
CTD:3198 GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634
GO:GO:0021569 GO:GO:0021570 GO:GO:0060876 EMBL:DAAA02010939
IPI:IPI00715521 RefSeq:NP_001193040.1 UniGene:Bt.112432
Ensembl:ENSBTAT00000001367 GeneID:537889 KEGG:bta:537889
NextBio:20877236 Uniprot:E1B918
Length = 333
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 66/116 (56%), Positives = 78/116 (67%)
Query: 94 SELSPLGV-HPHPT-SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
+ LSPL H SP+++ ++P + PP + N+ RTNFT
Sbjct: 176 NSLSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKIGEYGYVGQPNAVRTNFT 235
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 236 TKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 291
>UNIPROTKB|E2R5Z1 [details] [associations]
symbol:HOXA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0060876 "semicircular
canal formation" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0050795
"regulation of behavior" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048702 "embryonic neurocranium
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042473 "outer ear morphogenesis" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021754 "facial nucleus development" evidence=IEA] [GO:0021612
"facial nerve structural organization" evidence=IEA] [GO:0021599
"abducens nerve formation" evidence=IEA] [GO:0021571 "rhombomere 5
development" evidence=IEA] [GO:0021570 "rhombomere 4 development"
evidence=IEA] [GO:0021569 "rhombomere 3 development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0050795
GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
GO:GO:0021754 GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
CTD:3198 GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634
GO:GO:0021569 GO:GO:0021570 GO:GO:0060876 EMBL:AAEX03009390
RefSeq:XP_539484.2 Ensembl:ENSCAFT00000004700 GeneID:482367
KEGG:cfa:482367 NextBio:20856979 Uniprot:E2R5Z1
Length = 333
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 66/116 (56%), Positives = 78/116 (67%)
Query: 94 SELSPLGV-HPHPT-SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
+ LSPL H SP+++ ++P + PP + N+ RTNFT
Sbjct: 176 NSLSPLHASHQEACRSPTSETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFT 235
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 236 TKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 291
>UNIPROTKB|F1SHS9 [details] [associations]
symbol:HOXA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090103 "cochlea
morphogenesis" evidence=IEA] [GO:0060876 "semicircular canal
formation" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0050795
"regulation of behavior" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048702 "embryonic neurocranium
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042473 "outer ear morphogenesis" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021754 "facial nucleus development" evidence=IEA] [GO:0021612
"facial nerve structural organization" evidence=IEA] [GO:0021599
"abducens nerve formation" evidence=IEA] [GO:0021571 "rhombomere 5
development" evidence=IEA] [GO:0021570 "rhombomere 4 development"
evidence=IEA] [GO:0021569 "rhombomere 3 development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0050795
GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0007605 GO:GO:0050905 GO:GO:0048844
GO:GO:0090103 GO:GO:0021612 GO:GO:0042473 GO:GO:0021571
GO:GO:0021754 GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634
GO:GO:0021569 GO:GO:0021570 GO:GO:0060876 EMBL:CU570959
RefSeq:XP_003134892.1 Ensembl:ENSSSCT00000018188 GeneID:100520162
KEGG:ssc:100520162 Uniprot:F1SHS9
Length = 336
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 66/116 (56%), Positives = 78/116 (67%)
Query: 94 SELSPLGV-HPHPT-SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
+ LSPL H SP+++ ++P + PP + N+ RTNFT
Sbjct: 179 NSLSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFT 238
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 239 TKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 294
>MGI|MGI:96170 [details] [associations]
symbol:Hoxa1 "homeobox A1" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007605
"sensory perception of sound" evidence=ISO] [GO:0007634
"optokinetic behavior" evidence=ISO] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISO;IGI] [GO:0009952 "anterior/posterior
pattern specification" evidence=IGI;IMP] [GO:0021569 "rhombomere 3
development" evidence=IGI;IMP] [GO:0021570 "rhombomere 4
development" evidence=IGI;IMP] [GO:0021571 "rhombomere 5
development" evidence=IGI;IMP] [GO:0021599 "abducens nerve
formation" evidence=ISO] [GO:0021612 "facial nerve structural
organization" evidence=IGI] [GO:0021754 "facial nucleus
development" evidence=IMP] [GO:0021953 "central nervous system
neuron differentiation" evidence=IMP] [GO:0030902 "hindbrain
development" evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0042473 "outer ear morphogenesis" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=IGI]
[GO:0048702 "embryonic neurocranium morphogenesis" evidence=ISO]
[GO:0048839 "inner ear development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=ISO] [GO:0050795 "regulation of
behavior" evidence=ISO] [GO:0050890 "cognition" evidence=ISO]
[GO:0050905 "neuromuscular process" evidence=ISO] [GO:0060840
"artery development" evidence=ISO] [GO:0060876 "semicircular canal
formation" evidence=ISO] [GO:0090102 "cochlea development"
evidence=ISO] [GO:0090103 "cochlea morphogenesis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96170 GO:GO:0005634 GO:GO:0009952
GO:GO:0050795 GO:GO:0050890 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008045 GO:GO:0042472
GO:GO:0007605 GO:GO:0050905 GO:GO:0048844 GO:GO:0090103
GO:GO:0021612 GO:GO:0042473 GO:GO:0021571 GO:GO:0021754
eggNOG:NOG236971 HOVERGEN:HBG006089 OrthoDB:EOG47H5QN GO:GO:0021599
GO:GO:0021953 GO:GO:0048702 GO:GO:0007634 GO:GO:0021569
GO:GO:0021570 GO:GO:0060876 EMBL:M22115 EMBL:X06023 EMBL:X06024
EMBL:M20214 EMBL:M20216 EMBL:M20215 IPI:IPI00132373 IPI:IPI00406332
PIR:A27155 PIR:A30242 PIR:B30242 UniGene:Mm.197
ProteinModelPortal:P09022 SMR:P09022 DIP:DIP-59869N IntAct:P09022
STRING:P09022 PhosphoSite:P09022 PRIDE:P09022 HOGENOM:HOG000171545
InParanoid:P09022 Bgee:P09022 CleanEx:MM_HOXA1
Genevestigator:P09022 GermOnline:ENSMUSG00000029844 Uniprot:P09022
Length = 331
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 66/116 (56%), Positives = 78/116 (67%)
Query: 94 SELSPLGV-HPHPT-SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
+ LSPL H SP+++ ++P + PP + N+ RTNFT
Sbjct: 174 NSLSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFT 233
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 234 TKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 289
>UNIPROTKB|G3V6R3 [details] [associations]
symbol:Hoxa1 "Homeobox protein Hox-A1" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:2812 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 KO:K09301 OMA:RAYPSDH
UniGene:Rn.228589 UniGene:Rn.9780 EMBL:CH474011 EMBL:AC122669
RefSeq:XP_003752224.1 Ensembl:ENSRNOT00000007807 GeneID:100911406
KEGG:rno:100911406 Uniprot:G3V6R3
Length = 334
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 66/116 (56%), Positives = 78/116 (67%)
Query: 94 SELSPLGV-HPHPT-SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
+ LSPL H SP+++ ++P + PP + N+ RTNFT
Sbjct: 177 NSLSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFT 236
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 237 TKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 292
>UNIPROTKB|E1B7N3 [details] [associations]
symbol:HOXD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09301 CTD:3231
OMA:GDGAFVS EMBL:DAAA02004173 IPI:IPI00698903 RefSeq:XP_002685353.1
UniGene:Bt.104076 Ensembl:ENSBTAT00000021043 GeneID:100295780
KEGG:bta:100295780 Uniprot:E1B7N3
Length = 322
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 65/128 (50%), Positives = 84/128 (65%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQS 132
P G G + P+ P GV+P SP++ + ++ P + +++ +
Sbjct: 164 PTDGHSGAFQTASPA---P-GVYPKCASPASGLPAAFSTFEWMKVKRNAPKKSKFAEYGA 219
Query: 133 LLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQK 191
+S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQK
Sbjct: 220 ATPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQK 279
Query: 192 KRIKEGIL 199
KR +EG+L
Sbjct: 280 KREREGLL 287
>MGI|MGI:96201 [details] [associations]
symbol:Hoxd1 "homeobox D1" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048706 "embryonic skeletal system development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96201 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG006089
eggNOG:NOG314488 OrthoDB:EOG4DV5N0 EMBL:X60034 EMBL:M87802
IPI:IPI00785330 PIR:A56553 UniGene:Mm.4932
ProteinModelPortal:Q01822 SMR:Q01822 STRING:Q01822 PRIDE:Q01822
InParanoid:Q01822 CleanEx:MM_HOXD1 Genevestigator:Q01822
GermOnline:ENSMUSG00000042448 Uniprot:Q01822
Length = 327
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 64/113 (56%), Positives = 79/113 (69%)
Query: 96 LSPL-GVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQSLLNNSG-RTNFTNKQ 146
+SP G P P SP++ + ++ P + LS++ + S RTNF+ KQ
Sbjct: 180 VSPAPGACPKPASPTSSLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPPSAIRTNFSTKQ 239
Query: 147 LTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
LTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+L
Sbjct: 240 LTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKREREGLL 292
>RGD|1309179 [details] [associations]
symbol:Hoxd1 "homeo box D1" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048706 "embryonic skeletal system development"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1309179 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 EMBL:CH473949 GeneTree:ENSGT00700000104161 KO:K09301
CTD:3231 OMA:GDGAFVS OrthoDB:EOG4DV5N0 IPI:IPI00362608
RefSeq:NP_001099354.1 UniGene:Rn.47291 Ensembl:ENSRNOT00000002140
GeneID:288151 KEGG:rno:288151 UCSC:RGD:1309179 NextBio:627674
Uniprot:D4ACE4
Length = 328
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 65/127 (51%), Positives = 84/127 (66%)
Query: 96 LSPL-GVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQSLLNNSG-RTNFTNKQ 146
+SP G P P SP++ + ++ P + LS++ + +S RTNF+ KQ
Sbjct: 181 VSPAPGACPKPASPTSGLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPSSAIRTNFSTKQ 240
Query: 147 LTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGS 206
LTELEKEFHFNKYLTRARR+EIA+ LQLN+TQVKIWFQNRRMKQKKR +EG+L +
Sbjct: 241 LTELEKEFHFNKYLTRARRMEIANCLQLNDTQVKIWFQNRRMKQKKREREGLLATAASVA 300
Query: 207 LMGAQGS 213
+ GS
Sbjct: 301 SLQLPGS 307
>UNIPROTKB|E2QT64 [details] [associations]
symbol:HOXB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IEA] [GO:0021612 "facial nerve structural organization"
evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
[GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0021612 GO:GO:0021571 GO:GO:0021754
GeneTree:ENSGT00700000104161 KO:K09301 GO:GO:0021570 CTD:3211
OMA:YAICNRG EMBL:AAEX03006513 RefSeq:XP_548172.3
Ensembl:ENSCAFT00000026658 GeneID:491052 KEGG:cfa:491052
NextBio:20863953 Uniprot:E2QT64
Length = 305
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 61/99 (61%), Positives = 69/99 (69%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ PST +K PP A L G RTNFT +QLTELEKEFHFNK
Sbjct: 171 PCPSEPSTPTARTFDWMKVKRNPPKTAKVSEPGLGAPGGLRTNFTTRQLTELEKEFHFNK 230
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 231 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 269
>ZFIN|ZDB-GENE-000823-5 [details] [associations]
symbol:hoxa1a "homeo box A1a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-000823-5 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 eggNOG:NOG236971 KO:K09301
EMBL:AJ306430 EMBL:AJ306431 EMBL:AF071243 EMBL:AL645756
EMBL:CR382300 EMBL:DQ060531 IPI:IPI00494329 IPI:IPI00494805
RefSeq:NP_571611.1 UniGene:Dr.83046 ProteinModelPortal:Q98SI1
SMR:Q98SI1 STRING:Q98SI1 Ensembl:ENSDART00000080456
Ensembl:ENSDART00000080461 GeneID:58051 KEGG:dre:58051 CTD:58051
HOGENOM:HOG000247020 HOVERGEN:HBG006089 InParanoid:Q98SI1
OMA:RAYPSDH OrthoDB:EOG47H5QN NextBio:20892315 ArrayExpress:Q98SI1
Bgee:Q98SI1 Uniprot:Q98SI1
Length = 329
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 55/64 (85%), Positives = 60/64 (93%)
Query: 136 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQVKIWFQNRRMKQKKR K
Sbjct: 226 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 285
Query: 196 EGIL 199
EG+L
Sbjct: 286 EGLL 289
>UNIPROTKB|P14653 [details] [associations]
symbol:HOXB1 "Homeobox protein Hox-B1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021571 "rhombomere 5 development" evidence=IEA] [GO:0021612
"facial nerve structural organization" evidence=IEA] [GO:0021754
"facial nucleus development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS;TAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0007389 "pattern specification process"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0007389 GO:GO:0021612
GO:GO:0021571 GO:GO:0021754 eggNOG:NOG236971 KO:K09301
HOGENOM:HOG000247020 HOVERGEN:HBG006089 GO:GO:0021570
OrthoDB:EOG44F69X EMBL:X16666 EMBL:AC103702 IPI:IPI00294724
PIR:S07541 RefSeq:NP_002135.2 UniGene:Hs.99992 PDB:1B72 PDBsum:1B72
ProteinModelPortal:P14653 SMR:P14653 DIP:DIP-6106N IntAct:P14653
STRING:P14653 PhosphoSite:P14653 DMDM:251757285 PRIDE:P14653
Ensembl:ENST00000239174 GeneID:3211 KEGG:hsa:3211 UCSC:uc002ink.1
CTD:3211 GeneCards:GC17M046606 HGNC:HGNC:5111 HPA:HPA044576
MIM:142968 MIM:614744 neXtProt:NX_P14653 PharmGKB:PA29387
InParanoid:P14653 OMA:YAICNRG PhylomeDB:P14653
EvolutionaryTrace:P14653 GenomeRNAi:3211 NextBio:12776 Bgee:P14653
CleanEx:HS_HOXB1 Genevestigator:P14653 GermOnline:ENSG00000120094
Uniprot:P14653
Length = 301
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 60/98 (61%), Positives = 70/98 (71%)
Query: 103 PHPTSPSTDYTTPLTALKY---PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 158
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 167 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 226
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
YL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +E
Sbjct: 227 YLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRERE 264
>MGI|MGI:96182 [details] [associations]
symbol:Hoxb1 "homeobox B1" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IGI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0021546 "rhombomere development" evidence=IDA]
[GO:0021570 "rhombomere 4 development" evidence=IGI] [GO:0021571
"rhombomere 5 development" evidence=IGI] [GO:0021612 "facial nerve
structural organization" evidence=IMP] [GO:0021754 "facial nucleus
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96182 GO:GO:0005634
GO:GO:0005737 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0021612
GO:GO:0021571 GO:GO:0021754 GeneTree:ENSGT00700000104161
eggNOG:NOG236971 KO:K09301 HOGENOM:HOG000247020 HOVERGEN:HBG006089
GO:GO:0021570 OrthoDB:EOG44F69X CTD:3211 OMA:YAICNRG EMBL:X53063
EMBL:X59474 EMBL:AK017686 EMBL:BC103597 EMBL:BC103598 EMBL:BC103606
EMBL:M34005 IPI:IPI00308822 PIR:A60082 RefSeq:NP_032292.3
UniGene:Mm.890 ProteinModelPortal:P17919 SMR:P17919 STRING:P17919
PhosphoSite:P17919 PRIDE:P17919 Ensembl:ENSMUST00000019117
GeneID:15407 KEGG:mmu:15407 InParanoid:P17919 NextBio:288120
Bgee:P17919 CleanEx:MM_HOXB1 Genevestigator:P17919
GermOnline:ENSMUSG00000018973 Uniprot:P17919
Length = 297
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 61/103 (59%), Positives = 71/103 (68%)
Query: 97 SPLGVHPHPTSPST-DYTTPLTALKYPPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEF 154
SP P +P T D+ + + PP A L G RTNFT +QLTELEKEF
Sbjct: 162 SPCSSEPSTLTPRTFDW---MKVKRNPPKTAKVSELGLGAPGGLRTNFTTRQLTELEKEF 218
Query: 155 HFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
HFNKYL+RARR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 219 HFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREG 261
>ZFIN|ZDB-GENE-990415-101 [details] [associations]
symbol:hoxb1a "homeo box B1a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0021561 "facial nerve development" evidence=IMP] [GO:0021570
"rhombomere 4 development" evidence=IMP;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-101 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 HOGENOM:HOG000247020
HOVERGEN:HBG006089 GO:GO:0021570 GO:GO:0021561 EMBL:CR751227
EMBL:BC162942 IPI:IPI00509709 UniGene:Dr.83326 STRING:B3DHZ4
Ensembl:ENSDART00000110682 Uniprot:B3DHZ4
Length = 316
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 59/101 (58%), Positives = 70/101 (69%)
Query: 100 GVHPHPTSPSTDYTTPLTALKYPPPAA--LSQHQSLLNNSGRTNFTNKQLTELEKEFHFN 157
G P T +K PP ++++ N+ RTNFT KQLTELEKEFHF+
Sbjct: 185 GTEKDTDQPPPGKTFDWMKVKRNPPKTGKVAEYGLGPQNTIRTNFTTKQLTELEKEFHFS 244
Query: 158 KYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
KYLTRARR+EIA+ L+LNETQVKIWFQNRRMKQKKR KEG+
Sbjct: 245 KYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREKEGL 285
>UNIPROTKB|E1BFZ7 [details] [associations]
symbol:HOXB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IEA] [GO:0021612 "facial nerve structural organization"
evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
[GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0021612 GO:GO:0021571 GO:GO:0021754
GeneTree:ENSGT00700000104161 KO:K09301 GO:GO:0021570 CTD:3211
OMA:YAICNRG EMBL:DAAA02049068 IPI:IPI00714612 RefSeq:NP_001192883.1
UniGene:Bt.112414 Ensembl:ENSBTAT00000009997 GeneID:528429
KEGG:bta:528429 NextBio:20874821 Uniprot:E1BFZ7
Length = 302
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 59/94 (62%), Positives = 67/94 (71%)
Query: 106 TSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG--RTNFTNKQLTELEKEFHFNKYLTRA 163
TS T T +K PP + L G RTNFT +QLTELEKEFHFNKYL+RA
Sbjct: 173 TSTPTAQTFDWMKVKRNPPKTAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNKYLSRA 232
Query: 164 RRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 233 RRVEIAATLELNETQVKIWFQNRRMKQKKREREG 266
>UNIPROTKB|J9NYN6 [details] [associations]
symbol:HOXD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 OMA:GDGAFVS EMBL:AAEX03017793
Ensembl:ENSCAFT00000048782 Uniprot:J9NYN6
Length = 248
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 68/129 (52%), Positives = 85/129 (65%)
Query: 83 GEIGV-TKVQIPSELSPLGVHP--HPTSPSTDYTTPLTA----LKY----PPPAALSQHQ 131
GE G +++ P+ L P P +PTS S P + +K P + ++
Sbjct: 85 GEPGPPARLREPAALQPAAPGPGAYPTSASPASGLPAASTFEWMKVRRSAPRKSRPAEFG 144
Query: 132 SLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQ 190
+ +S RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQVKIWFQNRRMKQ
Sbjct: 145 AASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQ 204
Query: 191 KKRIKEGIL 199
KKR +EG+L
Sbjct: 205 KKREREGLL 213
>ZFIN|ZDB-GENE-000822-2 [details] [associations]
symbol:hoxc1a "homeo box C1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-2 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 EMBL:AJ306432 EMBL:BX005254
EMBL:DQ060550 EMBL:AF071263 IPI:IPI00507708 RefSeq:NP_571606.1
UniGene:Dr.83047 ProteinModelPortal:Q98SH9 SMR:Q98SH9
Ensembl:ENSDART00000103131 GeneID:58046 KEGG:dre:58046 CTD:58046
eggNOG:KOG0489 HOVERGEN:HBG094309 InParanoid:A2BE59
NextBio:20892310 ArrayExpress:Q98SH9 Bgee:Q98SH9 Uniprot:Q98SH9
Length = 302
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/68 (77%), Positives = 60/68 (88%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
+ RTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQL+ETQVKIWFQNRRMKQKK +
Sbjct: 215 SGGSRTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQVKIWFQNRRMKQKKML 274
Query: 195 KEGILIGV 202
+EG+ G+
Sbjct: 275 REGLAQGL 282
>ZFIN|ZDB-GENE-980526-290 [details] [associations]
symbol:hoxb1b "homeo box B1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-290
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030902 GeneTree:ENSGT00700000104161 HOGENOM:HOG000247020
HOVERGEN:HBG006089 EMBL:U40995 EMBL:AJ306433 EMBL:AL645798
EMBL:DQ060546 IPI:IPI00510340 RefSeq:NP_571217.2 UniGene:Dr.117296
ProteinModelPortal:Q90423 SMR:Q90423 STRING:Q90423
Ensembl:ENSDART00000076163 GeneID:30374 KEGG:dre:30374 CTD:30374
eggNOG:NOG314488 InParanoid:Q90423 OrthoDB:EOG44F69X
NextBio:20806792 ArrayExpress:Q90423 Bgee:Q90423 Uniprot:Q90423
Length = 307
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQVKIWFQNRRMKQKKR KEG
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEG 270
>UNIPROTKB|F1RWG8 [details] [associations]
symbol:LOC100521817 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IEA] [GO:0021612 "facial nerve structural organization"
evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
[GO:0021570 "rhombomere 4 development" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0021612 GO:GO:0021571 GO:GO:0021754
GeneTree:ENSGT00700000104161 KO:K09301 GO:GO:0021570 OMA:YAICNRG
EMBL:CU856160 EMBL:CU570713 RefSeq:XP_003131593.1
Ensembl:ENSSSCT00000019086 GeneID:100521817 KEGG:ssc:100521817
Uniprot:F1RWG8
Length = 301
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 58/94 (61%), Positives = 69/94 (73%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRA 163
PT+ + D+ + + PP A L G RTNFT +QLTELEKEFHFNKYL+RA
Sbjct: 175 PTARTFDW---MKVKRNPPKTAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNKYLSRA 231
Query: 164 RRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
RR+EIA+ L+LNETQVKIWFQNRRMKQKKR +EG
Sbjct: 232 RRVEIAATLELNETQVKIWFQNRRMKQKKREREG 265
>UNIPROTKB|G3V737 [details] [associations]
symbol:Hoxb1 "Homeo box B1 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0021570 "rhombomere 4 development"
evidence=IEA] [GO:0021571 "rhombomere 5 development" evidence=IEA]
[GO:0021612 "facial nerve structural organization" evidence=IEA]
[GO:0021754 "facial nucleus development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1310298 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH473948 GeneTree:ENSGT00700000104161 KO:K09301 CTD:3211
OMA:YAICNRG RefSeq:XP_001081344.1 RefSeq:XP_220896.4
UniGene:Rn.13797 Ensembl:ENSRNOT00000011416 GeneID:303491
KEGG:rno:303491 NextBio:651436 Uniprot:G3V737
Length = 297
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/83 (67%), Positives = 63/83 (75%)
Query: 122 PPPAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
PP A L G RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQVK
Sbjct: 185 PPKTAKVSELGLGTPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVK 244
Query: 181 IWFQNRRMKQKKRIKEGILIGVG 203
IWFQNRRMKQKKR +EG + G
Sbjct: 245 IWFQNRRMKQKKREREGGRVPAG 267
>UNIPROTKB|Q9GZZ0 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:CH471058 GO:GO:0048706 KO:K09301
HOGENOM:HOG000247020 HOVERGEN:HBG006089 eggNOG:NOG314488
EMBL:AF202118 EMBL:AF241528 EMBL:AK314120 IPI:IPI00001551
RefSeq:NP_078777.1 UniGene:Hs.83465 ProteinModelPortal:Q9GZZ0
SMR:Q9GZZ0 STRING:Q9GZZ0 DMDM:17378648 PeptideAtlas:Q9GZZ0
PRIDE:Q9GZZ0 DNASU:3231 Ensembl:ENST00000331462 GeneID:3231
KEGG:hsa:3231 UCSC:uc002ukv.4 CTD:3231 GeneCards:GC02P177053
HGNC:HGNC:5132 MIM:142987 neXtProt:NX_Q9GZZ0 PharmGKB:PA29406
InParanoid:Q9GZZ0 OMA:GDGAFVS OrthoDB:EOG4DV5N0 PhylomeDB:Q9GZZ0
GenomeRNAi:3231 NextBio:12857 Bgee:Q9GZZ0 CleanEx:HS_HOXD1
Genevestigator:Q9GZZ0 GermOnline:ENSG00000128645 Uniprot:Q9GZZ0
Length = 328
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 60/112 (53%), Positives = 76/112 (67%)
Query: 97 SPL-GVHPHPTSPSTDYTTPLTALKY-------PPPAALSQHQSLLNNSG-RTNFTNKQL 147
SP G +P SP++ + ++ L+++ + +S RTNF+ KQL
Sbjct: 182 SPAPGTYPKSVSPASGLPAAFSTFEWMKVKRNASKKGKLAEYGAASPSSAIRTNFSTKQL 241
Query: 148 TELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
TELEKEFHFNKYLTRARRIEIA+ L LN+TQVKIWFQNRRMKQKKR +EG+L
Sbjct: 242 TELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKREREGLL 293
>RGD|2812 [details] [associations]
symbol:Hoxa1 "homeo box A1" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=ISO] [GO:0007634
"optokinetic behavior" evidence=ISO] [GO:0008045 "motor neuron axon
guidance" evidence=ISO] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0021569 "rhombomere 3 development"
evidence=ISO] [GO:0021570 "rhombomere 4 development" evidence=ISO]
[GO:0021571 "rhombomere 5 development" evidence=ISO] [GO:0021599
"abducens nerve formation" evidence=ISO] [GO:0021612 "facial nerve
structural organization" evidence=ISO] [GO:0021754 "facial nucleus
development" evidence=ISO] [GO:0021953 "central nervous system neuron
differentiation" evidence=ISO] [GO:0030902 "hindbrain development"
evidence=ISO] [GO:0042472 "inner ear morphogenesis" evidence=ISO]
[GO:0042473 "outer ear morphogenesis" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=ISO] [GO:0048702 "embryonic neurocranium
morphogenesis" evidence=ISO] [GO:0048839 "inner ear development"
evidence=ISO] [GO:0048844 "artery morphogenesis" evidence=ISO]
[GO:0050795 "regulation of behavior" evidence=ISO] [GO:0050890
"cognition" evidence=ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0060840 "artery development" evidence=ISO]
[GO:0060876 "semicircular canal formation" evidence=ISO] [GO:0090102
"cochlea development" evidence=ISO] [GO:0090103 "cochlea
morphogenesis" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2812 GO:GO:0005634 GO:GO:0009952
GO:GO:0050795 GO:GO:0050890 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008045
GO:GO:0007605 GO:GO:0050905 GO:GO:0048844 GO:GO:0090103 GO:GO:0021612
GO:GO:0042473 GO:GO:0021571 GO:GO:0021754 eggNOG:NOG236971 KO:K09301
HOGENOM:HOG000247020 HOVERGEN:HBG006089 OrthoDB:EOG47H5QN CTD:3198
GO:GO:0021599 GO:GO:0021953 GO:GO:0048702 GO:GO:0007634 GO:GO:0021569
GO:GO:0021570 GO:GO:0060876 EMBL:U93092 IPI:IPI00324676
RefSeq:NP_037207.1 UniGene:Rn.228589 UniGene:Rn.9780
ProteinModelPortal:O08656 SMR:O08656 STRING:O08656 GeneID:25607
KEGG:rno:25607 UCSC:RGD:2812 InParanoid:O08656 NextBio:607335
Genevestigator:O08656 GermOnline:ENSRNOG00000005628 Uniprot:O08656
Length = 333
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 65/116 (56%), Positives = 76/116 (65%)
Query: 94 SELSPLGV-HPHPT-SPSTDYTTPLTALKY------PPPAALSQHQSLLN--NSGRTNFT 143
+ LSPL H SP+++ ++P + PP + N+ RTNFT
Sbjct: 177 NSLSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFT 236
Query: 144 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGIL 199
KQLTELEKEFHFNKYLTRAR EIA+ LQLNETQVKIWFQNRRMKQKKR KEG+L
Sbjct: 237 TKQLTELEKEFHFNKYLTRARS-EIAASLQLNETQVKIWFQNRRMKQKKREKEGLL 291
>WB|WBGene00000437 [details] [associations]
symbol:ceh-13 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0040007
GO:GO:0007411 GO:GO:0002119 GO:GO:0043565 GO:GO:0016358
GO:GO:0010171 GO:GO:0040018 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009790
GO:GO:0016337 GO:GO:0007413 GeneTree:ENSGT00700000104189
EMBL:X17077 EMBL:FO080424 PIR:S09505 RefSeq:NP_498655.1
ProteinModelPortal:P17488 SMR:P17488 STRING:P17488
EnsemblMetazoa:R13A5.5 GeneID:176069 KEGG:cel:CELE_R13A5.5
UCSC:R13A5.5 CTD:176069 WormBase:R13A5.5 eggNOG:NOG236971
HOGENOM:HOG000018801 InParanoid:P17488 KO:K09301 OMA:QHNTYKW
NextBio:890976 Uniprot:P17488
Length = 202
Score = 227 (85.0 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 48/73 (65%), Positives = 53/73 (72%)
Query: 124 PAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWF 183
PAA + N + RTNFT QLTELEKEFH KY+ R RR EIAS L+L E QVKIWF
Sbjct: 103 PAAPKKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWF 162
Query: 184 QNRRMKQKKRIKE 196
QNRRMK+KKR KE
Sbjct: 163 QNRRMKEKKREKE 175
Score = 55 (24.4 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 92 IPSELSPLGVHP------HPTS---PSTDYTTPLTALKYPPPAALSQHQS 132
+PS SPL HP HP++ + + P TA PPA+ S + S
Sbjct: 28 VPSSYSPLNHHPADIWAAHPSNYIMGNGHVSPPATASGLSPPASRSSNSS 77
>UNIPROTKB|E1BQ69 [details] [associations]
symbol:HOXA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007634 "optokinetic behavior" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0021569 "rhombomere 3 development" evidence=IEA] [GO:0021570
"rhombomere 4 development" evidence=IEA] [GO:0021571 "rhombomere 5
development" evidence=IEA] [GO:0021599 "abducens nerve formation"
evidence=IEA] [GO:0021612 "facial nerve structural organization"
evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IEA] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA] [GO:0042473 "outer ear
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048702 "embryonic neurocranium morphogenesis" evidence=IEA]
[GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0050795
"regulation of behavior" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0060876 "semicircular canal formation" evidence=IEA]
[GO:0090103 "cochlea morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0050795 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 IPI:IPI00584066
EMBL:AADN02000974 EMBL:AADN02000975 EMBL:AADN02000976
Ensembl:ENSGALT00000018004 OMA:YNGICSK ArrayExpress:E1BQ69
Uniprot:E1BQ69
Length = 196
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 56/76 (73%), Positives = 60/76 (78%)
Query: 124 PAALSQHQSLLNNSG-------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 176
PA LS L + +G RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNE
Sbjct: 121 PACLSHKDGLRSPAGLRPPNTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNE 180
Query: 177 TQVKIWFQNRRMKQKK 192
TQVKIWFQNRRMKQKK
Sbjct: 181 TQVKIWFQNRRMKQKK 196
>UNIPROTKB|O43365 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010159 "specification of organ position"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0060017 "parathyroid gland development"
evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0008284 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878 eggNOG:NOG284589
EMBL:AC004079 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
OMA:HIQGSPV OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293
CTD:3200 GO:GO:0021615 EMBL:BC015180 IPI:IPI00012050
RefSeq:NP_109377.1 RefSeq:NP_705895.1 UniGene:Hs.659337
ProteinModelPortal:O43365 SMR:O43365 STRING:O43365
PhosphoSite:O43365 PaxDb:O43365 PRIDE:O43365 DNASU:3200
Ensembl:ENST00000317201 Ensembl:ENST00000396352 GeneID:3200
KEGG:hsa:3200 UCSC:uc003syk.3 GeneCards:GC07M027113 HGNC:HGNC:5104
HPA:HPA029157 MIM:142954 neXtProt:NX_O43365 PharmGKB:PA29381
InParanoid:O43365 PhylomeDB:O43365 GenomeRNAi:3200 NextBio:12728
ArrayExpress:O43365 Bgee:O43365 CleanEx:HS_HOXA3
Genevestigator:O43365 GermOnline:ENSG00000105997 Uniprot:O43365
Length = 443
Score = 213 (80.0 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 44/78 (56%), Positives = 55/78 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
Score = 55 (24.4 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQL 147
P + +P P P P+ P A PPP++ S Q+ NN N L
Sbjct: 94 PPQAAPPA--PQPPQPAPQPPAPTPAAP-PPPSSASPPQNASNNPTPANAAKSPL 145
>MGI|MGI:96175 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0010159 "specification of organ
position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
"parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
GermOnline:ENSMUSG00000059723 Uniprot:P02831
Length = 443
Score = 213 (80.0 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 44/78 (56%), Positives = 55/78 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 252
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 253 ----GKGMLTSSGGQSPS 266
Score = 50 (22.7 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNN 136
P + +P P P P P A PPP+++S QS +N
Sbjct: 95 PPQAAPPA--PQPPQPPPQPPAPTPAAP-PPPSSVSPPQSANSN 135
Score = 40 (19.1 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 93 PSELSPLGVHPHPTSPS--TDYTTPLTALKYPPPAALSQHQSLLNN 136
P + P P P +P + + P +A P PA+ ++ LLN+
Sbjct: 105 PPQPPPQPPAPTPAAPPPPSSVSPPQSANSNPTPASTAK-SPLLNS 149
>RGD|1561431 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0010159 "specification of organ
position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
development" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
"parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
Uniprot:D3ZM81
Length = 444
Score = 213 (80.0 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 44/78 (56%), Positives = 55/78 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 252
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 253 ----GKGMLTSSGGQSPS 266
Score = 50 (22.7 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNN 136
P + +P P P P P A PPP+++S QS +N
Sbjct: 95 PPQAAPPA--PQPPQPPPQPPAPTPAAP-PPPSSVSPPQSANSN 135
Score = 40 (19.1 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 93 PSELSPLGVHPHPTSPS--TDYTTPLTALKYPPPAALSQHQSLLNN 136
P + P P P +P + + P +A P PA+ ++ LLN+
Sbjct: 105 PPQPPPQPPAPTPAAPPPPSSVSPPQSANSNPTPASTAK-SPLLNS 149
>UNIPROTKB|O93353 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OrthoDB:EOG4K6G4J InterPro:IPR025281
Pfam:PF13293 CTD:3200 EMBL:AF067959 EMBL:AB111110 IPI:IPI00571086
RefSeq:NP_989879.1 RefSeq:XP_003640749.1 UniGene:Gga.48467
UniGene:Gga.49158 ProteinModelPortal:O93353 SMR:O93353
Ensembl:ENSGALT00000018005 GeneID:100858480 GeneID:395231
KEGG:gga:100858480 KEGG:gga:395231 InParanoid:O93353
NextBio:20815320 Uniprot:O93353
Length = 413
Score = 211 (79.3 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 43/78 (55%), Positives = 55/78 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 233
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G + + G SP+
Sbjct: 234 ----GKGMMTSSGGQSPS 247
Score = 50 (22.7 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 92 IPSE-LSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFT 143
+PS+ L P G+ P +P P + PPP++ S Q+ +N N T
Sbjct: 74 LPSQPLQPPGL-TDPQAPPQP--PPAPQAQPPPPSSASPSQNASSNPAPANST 123
>UNIPROTKB|F1RZG0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
Uniprot:F1RZG0
Length = 257
Score = 203 (76.5 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 212
Score = 47 (21.6 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 93 PSELSPLGVH-PHPTSPSTDYTTP---LTALKYPPPAAL 127
P P H P P+ P Y P A PPPA L
Sbjct: 69 PGSALPTRSHGPEPSGPGGHYGAPGEPCPAPPAPPPAPL 107
>UNIPROTKB|Q08DG7 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9913 "Bos
taurus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IEA]
[GO:0010159 "specification of organ position" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001974 GO:GO:0051216 GO:GO:0048538 GO:GO:0048645
GO:GO:0048704 GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 EMBL:BC123759 IPI:IPI00693889
RefSeq:NP_001070293.1 UniGene:Bt.87350 ProteinModelPortal:Q08DG7
SMR:Q08DG7 PRIDE:Q08DG7 Ensembl:ENSBTAT00000010700 GeneID:509991
KEGG:bta:509991 CTD:3200 InParanoid:Q08DG7 NextBio:20869233
GO:GO:0021615 Uniprot:Q08DG7
Length = 442
Score = 213 (80.0 bits), Expect = 8.2e-20, Sum P(2) = 8.2e-20
Identities = 44/78 (56%), Positives = 55/78 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
Score = 49 (22.3 bits), Expect = 8.2e-20, Sum P(2) = 8.2e-20
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 68 CVFSLSSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAAL 127
C+ +LS PV GE + P P P P P TP PPP+++
Sbjct: 71 CLRTLSGPPSQPPVLGEPPLAPPP-PQAAPPAPPQP-PAPPQPPAPTPAAP---PPPSSV 125
Query: 128 SQHQSLLNN 136
S Q+ +N
Sbjct: 126 SPPQNGSSN 134
Score = 39 (18.8 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 91 QIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNN 136
Q P+ P P P + + P P PA+ ++ LLN+
Sbjct: 104 QPPAPPQPPAPTPAAPPPPSSVSPPQNGSSNPTPASAAK-SPLLNS 148
>UNIPROTKB|J9NWE8 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 EMBL:AAEX03009390
RefSeq:XP_864544.1 Ensembl:ENSCAFT00000046660 GeneID:482368
KEGG:cfa:482368 Uniprot:J9NWE8
Length = 442
Score = 213 (80.0 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 44/78 (56%), Positives = 55/78 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 252
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 253 ----GKGMLTSSGGQSPS 266
Score = 48 (22.0 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 18/69 (26%), Positives = 26/69 (37%)
Query: 68 CVFSLSSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAAL 127
C+ +LS P GE + P P P P P P PPP+++
Sbjct: 71 CLRTLSGPPSQPPGLGEPPLAPPP-PQAAPPAPQQPQPPPPQPPAPAPAAP---PPPSSV 126
Query: 128 SQHQSLLNN 136
S Q+ +N
Sbjct: 127 SPPQNASSN 135
Score = 40 (19.1 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 91 QIPSELSPLGVHPHPTSPS--TDYTTPLTALKYPPPAALSQHQSLLNN 136
Q P P P P +P + + P A P PA+ ++ LLN+
Sbjct: 103 QQPQPPPPQPPAPAPAAPPPPSSVSPPQNASSNPTPASAAK-SPLLNS 149
>UNIPROTKB|F1SHT1 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0060017 "parathyroid gland
development" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
nerve morphogenesis" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0001974 "blood
vessel remodeling" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615
EMBL:CU570959 RefSeq:XP_003134890.1 Ensembl:ENSSSCT00000018186
GeneID:100519809 KEGG:ssc:100519809 Uniprot:F1SHT1
Length = 443
Score = 213 (80.0 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 44/78 (56%), Positives = 55/78 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--- 251
Query: 199 LIGVGEGSLMGAQGSSPN 216
G+G L + G SP+
Sbjct: 252 ----GKGMLTSSGGQSPS 265
Score = 46 (21.3 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 98 PLGVHPHPTSPSTDYTTPLTA-LKYPPPAALSQHQSLLNN 136
P P P P P A PPP+++S Q+ +N
Sbjct: 95 PQAAPPAPQQPQPPQQPPAPAPAAPPPPSSVSPPQNASSN 134
Score = 40 (19.1 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNN 136
P + P P PS+ + P A P PA+ ++ LLN+
Sbjct: 107 PPQQPPAPAPAAPPPPSS-VSPPQNASSNPTPASAAK-SPLLNS 148
>UNIPROTKB|A7MBD6 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
Uniprot:A7MBD6
Length = 258
Score = 203 (76.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 161 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 214
Score = 43 (20.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 15/38 (39%), Positives = 15/38 (39%)
Query: 93 PSELSPLGVHPHPTSPSTDYTT---PLTALKYPPPAAL 127
PS L G P P P Y P A PPPA L
Sbjct: 73 PS-LPTRGHGPEPGGPGGHYGASGEPCPAPSAPPPAPL 109
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 204 (76.9 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 46/80 (57%), Positives = 53/80 (66%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK--- 195
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 170 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 229
Query: 196 -EGILIGVGEGSLMGAQGSS 214
+G VG AQ S
Sbjct: 230 TKGRSASVGNQHAQHAQKDS 249
Score = 40 (19.1 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 88 TKVQ--IPSELSPLGVHP-----HPTSPSTDYTTP 115
TK Q IP++ P V+P H T+ + DYT P
Sbjct: 131 TKTQNGIPTK-QPAVVYPWMKKVHVTTVNPDYTGP 164
>UNIPROTKB|E1U314 [details] [associations]
symbol:Hoxa5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
signaling involved in mammary gland development" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202 KO:K09305
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:CU570959 EMBL:EU914851 EMBL:EU914852
RefSeq:NP_001182161.1 UniGene:Ssc.47987 Ensembl:ENSSSCT00000018184
GeneID:100499568 KEGG:ssc:100499568 Uniprot:E1U314
Length = 270
Score = 198 (74.8 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 199 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252
Score = 46 (21.3 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 100 GVHPHPTSPSTDYTTPLTALKYPPPAAL 127
G PT P Y+ P T+ PPP L
Sbjct: 76 GASAAPTEPR--YSQPATSTHSPPPDPL 101
>UNIPROTKB|P31249 [details] [associations]
symbol:HOXD3 "Homeobox protein Hox-D3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007160 "cell-matrix adhesion" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030878 "thyroid gland development" evidence=ISS]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISS] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISS] [GO:0051216 "cartilage development" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0007160 GO:GO:0045666
GO:GO:0010628 GO:GO:0048704 GO:GO:0030878 EMBL:AC009336
eggNOG:NOG284589 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 EMBL:D11117
EMBL:Y09980 EMBL:BC005124 EMBL:BC008789 IPI:IPI00215882 PIR:S15548
PIR:S27198 RefSeq:NP_008829.3 UniGene:Hs.93574
ProteinModelPortal:P31249 SMR:P31249 IntAct:P31249 STRING:P31249
PhosphoSite:P31249 DMDM:224471887 PRIDE:P31249 DNASU:3232
Ensembl:ENST00000249440 Ensembl:ENST00000410016
Ensembl:ENST00000468418 GeneID:3232 KEGG:hsa:3232 UCSC:uc002ukt.1
CTD:3232 GeneCards:GC02P177001 HGNC:HGNC:5137 HPA:HPA051831
MIM:142980 neXtProt:NX_P31249 PharmGKB:PA29411 InParanoid:P31249
OMA:PECTMQK PhylomeDB:P31249 GenomeRNAi:3232 NextBio:12861
ArrayExpress:P31249 Bgee:P31249 CleanEx:HS_HOXD3
Genevestigator:P31249 GermOnline:ENSG00000128652 Uniprot:P31249
Length = 432
Score = 210 (79.0 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 46/81 (56%), Positives = 56/81 (69%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 198 ILIGVGEGSLMGAQGSSPNGG 218
IL S + S P GG
Sbjct: 258 ILHSPASQS---PERSPPLGG 275
Score = 46 (21.3 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 106 TSPSTDYTTPLTALKYPPPAALS 128
T+ + Y+TP YPPPAA S
Sbjct: 37 TTDTYGYSTPHQP--YPPPAAAS 57
>ZFIN|ZDB-GENE-000823-9 [details] [associations]
symbol:hoxa5a "homeo box A5a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-9 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
EMBL:CR382300 HOVERGEN:HBG016849 EMBL:AF071247 EMBL:DQ060534
IPI:IPI00485489 RefSeq:NP_571615.1 UniGene:Dr.134275
ProteinModelPortal:Q9YGT6 SMR:Q9YGT6 Ensembl:ENSDART00000003506
GeneID:58055 KEGG:dre:58055 CTD:58055 eggNOG:NOG236516
HOGENOM:HOG000231178 InParanoid:Q9YGT6 OMA:YRDSASM
OrthoDB:EOG49S677 NextBio:20892319 ArrayExpress:Q9YGT6 Bgee:Q9YGT6
Uniprot:Q9YGT6
Length = 265
Score = 206 (77.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 45/81 (55%), Positives = 53/81 (65%)
Query: 130 HQSLLNNSG---RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNR 186
H +L G RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNR
Sbjct: 182 HDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNR 241
Query: 187 RMKQKK--RIKEGILIGVGEG 205
RMK KK ++K + G G
Sbjct: 242 RMKWKKDNKLKSMNMAAAGSG 262
Score = 37 (18.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNN 136
PT+ Y P+TA P + SL N+
Sbjct: 77 PTATPVRYNQPVTASSAEPSSDHLPCSSLANS 108
>UNIPROTKB|F1NMG4 [details] [associations]
symbol:LOC100858374 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
Length = 309
Score = 204 (76.9 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 213 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 266
Score = 39 (18.8 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 102 HPHPTSPSTDYTTPLTALK--YPPPA 125
HPHP +P P L +P PA
Sbjct: 40 HPHPHAPPPPPPPPPPHLHAAHPGPA 65
Score = 35 (17.4 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 95 ELSPLGVHPHPTSPSTDYTTPLTALKYP 122
E P G P P P+ + P L +P
Sbjct: 122 EQPPPGAFPPPPPPAKGHPGPAQPL-FP 148
>UNIPROTKB|P17277 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
Length = 309
Score = 204 (76.9 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 213 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 266
Score = 39 (18.8 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 102 HPHPTSPSTDYTTPLTALK--YPPPA 125
HPHP +P P L +P PA
Sbjct: 40 HPHPHAPPPPPPPPPPHLHAAHPGPA 65
>FB|FBgn0000014 [details] [associations]
symbol:abd-A "abdominal A" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0008406 "gonad
development" evidence=NAS;TAS] [GO:0007422 "peripheral nervous
system development" evidence=TAS] [GO:0035224 "genital disc
anterior/posterior pattern formation" evidence=IEP] [GO:0007506
"gonadal mesoderm development" evidence=IMP] [GO:0008354 "germ cell
migration" evidence=IMP;TAS] [GO:0007280 "pole cell migration"
evidence=TAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0007385 "specification of segmental identity, abdomen"
evidence=NAS] [GO:0007438 "oenocyte development" evidence=IMP]
[GO:0035053 "dorsal vessel heart proper cell fate commitment"
evidence=IEP;IMP;TAS] [GO:0007507 "heart development" evidence=IMP]
[GO:0007501 "mesodermal cell fate specification" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0009987 "cellular process"
evidence=IMP] [GO:0007400 "neuroblast fate determination"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0048806 "genitalia development"
evidence=IMP] [GO:0010002 "cardioblast differentiation"
evidence=IMP] [GO:0048738 "cardiac muscle tissue development"
evidence=IMP] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0014019 "neuroblast development" evidence=IMP]
[GO:0048636 "positive regulation of muscle organ development"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0042694 "muscle
cell fate specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0006915 GO:GO:0007280 GO:GO:0042694 GO:GO:0048636
GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 eggNOG:NOG328968
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X54453 EMBL:U31961
EMBL:BT016031 PIR:A35915 RefSeq:NP_001163632.1
RefSeq:NP_001247145.1 RefSeq:NP_476693.1 RefSeq:NP_732176.1
UniGene:Dm.3286 ProteinModelPortal:P29555 SMR:P29555 DIP:DIP-17987N
MINT:MINT-344957 STRING:P29555 EnsemblMetazoa:FBtr0083388
GeneID:42037 KEGG:dme:Dmel_CG10325 CTD:42037 FlyBase:FBgn0000014
GeneTree:ENSGT00700000104090 InParanoid:P29555 KO:K09311
OMA:QPFISSH OrthoDB:EOG4VHHQ4 PhylomeDB:P29555 GenomeRNAi:42037
NextBio:826865 Bgee:P29555 GermOnline:CG10325 GO:GO:0005667
GO:GO:0003705 GO:GO:0048738 GO:GO:0010002 GO:GO:0035225
GO:GO:0035053 GO:GO:0035224 GO:GO:0048806 GO:GO:0007506
GO:GO:0007501 GO:GO:0007494 GO:GO:0014019 GO:GO:0007400
GO:GO:0007438 Uniprot:P29555
Length = 590
Score = 199 (75.1 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFHFN YLTR RRIEIA L L E Q+KIWFQNRRMK KK ++
Sbjct: 401 GRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 458
Score = 40 (19.1 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 194 IKEGILIGVGEGSLMGAQGSSPNGGL 219
+K G+ +GVG G +G G GGL
Sbjct: 541 LKLGLGMGVGVG--VGGIGPGIGGGL 564
Score = 39 (18.8 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRT 140
P S S L A A++S S NNS T
Sbjct: 30 PNSSSAAVAAALAAAAASASASVSASSSSNNNSSNT 65
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 206 (77.6 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 41/59 (69%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 100 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 158
Score = 36 (17.7 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 109 STDYTTPLTALKYPPPAALSQHQSLLNNSGRTNF 142
S D P+ P+ +S L+N NF
Sbjct: 51 SFDQNIPVLCNDLTKPSCEKAEESNLHNQAEANF 84
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 206 (77.6 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 41/59 (69%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 132 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 190
Score = 36 (17.7 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 109 STDYTTPLTALKYPPPAALSQHQSLLNNSGRTNF 142
S D P+ P+ +S L+N NF
Sbjct: 83 SFDQNIPVLCNDLTKPSCEKAEESNLHNQAEANF 116
>UNIPROTKB|D4A426 [details] [associations]
symbol:100365058 "Homeo box B2 (Predicted)" species:10116
"Rattus norvegicus" [GO:0002011 "morphogenesis of an epithelial
sheet" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021612 "facial nerve structural organization" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048857 "neural nucleus development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704
EMBL:CH473948 GO:GO:0002011 GO:GO:0021612
GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
CTD:3212 OrthoDB:EOG4QC167 GO:GO:0048857 IPI:IPI00958412
RefSeq:XP_002724587.1 RefSeq:XP_002727852.1 UniGene:Rn.231109
Ensembl:ENSRNOT00000011213 GeneID:100361765 KEGG:rno:100361765
UCSC:RGD:2319509 Uniprot:D4A426
Length = 355
Score = 211 (79.3 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 200
Score = 36 (17.7 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 75 LRDLFPVKGEIGVTKVQIPSELSPLGVHP--HPTSP 108
L FP ++G + +Q P P G P P P
Sbjct: 50 LEQTFPSL-QLGASTLQRPGSQKPAGDGPALRPPPP 84
>UNIPROTKB|E2QT40 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09306 CTD:3216 RefSeq:XP_003435306.1
ProteinModelPortal:E2QT40 Ensembl:ENSCAFT00000026682 GeneID:491056
KEGG:cfa:491056 NextBio:20863955 Uniprot:E2QT40
Length = 224
Score = 199 (75.1 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 149 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 206
Score = 42 (19.8 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 98 PLGVHPHPTSPSTDYTTPLTALKYPPPA 125
PL +P P P A Y PPA
Sbjct: 35 PLRHYPAPYGPGPGQDKGFAASSYYPPA 62
>UNIPROTKB|F6UVZ9 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 OMA:AEGSCAF
GeneTree:ENSGT00700000104332 Ensembl:ENSCAFT00000026682
EMBL:AAEX03006516 Uniprot:F6UVZ9
Length = 232
Score = 199 (75.1 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 149 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 206
Score = 42 (19.8 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 98 PLGVHPHPTSPSTDYTTPLTALKYPPPA 125
PL +P P P A Y PPA
Sbjct: 35 PLRHYPAPYGPGPGQDKGFAASSYYPPA 62
>UNIPROTKB|F1RWG1 [details] [associations]
symbol:HOXB6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0034101
"erythrocyte homeostasis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0034101
KO:K09306 OMA:AEGSCAF GeneTree:ENSGT00700000104332 EMBL:CU856160
RefSeq:XP_003358123.1 Ensembl:ENSSSCT00000019093 GeneID:100627849
KEGG:ssc:100627849 Uniprot:F1RWG1
Length = 224
Score = 199 (75.1 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 149 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 206
Score = 42 (19.8 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 98 PLGVHPHPTSPSTDYTTPLTALKYPPPA 125
PL +P P P A Y PPA
Sbjct: 35 PLRHYPAPYGPGPGQDKGFAASSYYPPA 62
>MGI|MGI:96187 [details] [associations]
symbol:Hoxb6 "homeobox B6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0034101 "erythrocyte homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI] [GO:0048706 "embryonic skeletal system development"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96187 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0034101 HOVERGEN:HBG016849
KO:K09306 eggNOG:NOG305812 OrthoDB:EOG4G7C0G CTD:3216 EMBL:M18166
EMBL:X56459 EMBL:BC016893 EMBL:M18401 EMBL:J03782 IPI:IPI00132375
PIR:A31324 PIR:B29585 PIR:C27176 RefSeq:NP_032295.1 UniGene:Mm.215
ProteinModelPortal:P09023 SMR:P09023 DIP:DIP-59870N STRING:P09023
PhosphoSite:P09023 PaxDb:P09023 PRIDE:P09023
Ensembl:ENSMUST00000000704 Ensembl:ENSMUST00000173432 GeneID:15414
KEGG:mmu:15414 GeneTree:ENSGT00700000104332 InParanoid:P09023
OMA:FVNSSFP NextBio:288142 Bgee:P09023 CleanEx:MM_HOXB6
Genevestigator:P09023 GermOnline:ENSMUSG00000000690 Uniprot:P09023
Length = 224
Score = 199 (75.1 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 149 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 206
Score = 42 (19.8 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 98 PLGVHPHPTSPSTDYTTPLTALKYPPPA 125
PL +P P P A Y PPA
Sbjct: 35 PLRHYPAPYGPGPGQDKGFAASSYYPPA 62
>RGD|1562142 [details] [associations]
symbol:Hoxb6 "homeo box B6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0034101 "erythrocyte homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1562142 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
EMBL:CH473948 GO:GO:0034101 KO:K09306 OrthoDB:EOG4G7C0G CTD:3216
GeneTree:ENSGT00700000104332 OMA:FVNSSFP IPI:IPI00196016
RefSeq:XP_003752419.1 RefSeq:XP_573182.1 SMR:D3ZLU8
Ensembl:ENSRNOT00000010527 GeneID:497986 KEGG:rno:497986
UCSC:RGD:1562142 NextBio:698302 Uniprot:D3ZLU8
Length = 224
Score = 199 (75.1 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 149 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 206
Score = 42 (19.8 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 98 PLGVHPHPTSPSTDYTTPLTALKYPPPA 125
PL +P P P A Y PPA
Sbjct: 35 PLRHYPAPYGPGPGQDKGFAASSYYPPA 62
>UNIPROTKB|E2RGV4 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 CTD:3232 OMA:PECTMQK
EMBL:AAEX03017792 RefSeq:XP_545539.2 Ensembl:ENSCAFT00000021350
GeneID:488417 KEGG:cfa:488417 NextBio:20861770 Uniprot:E2RGV4
Length = 431
Score = 208 (78.3 bits), Expect = 8.6e-19, Sum P(2) = 8.6e-19
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 197 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 256
Query: 198 IL 199
IL
Sbjct: 257 IL 258
Score = 44 (20.5 bits), Expect = 8.6e-19, Sum P(2) = 8.6e-19
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 107 SPSTD--YTTPLTALKYPPPAALS 128
S +TD Y TP YPPPAA S
Sbjct: 35 SKATDAYYGTPHQP--YPPPAAAS 56
>UNIPROTKB|Q2HJ67 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
signaling involved in mammary gland development" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677
EMBL:BC113284 IPI:IPI00711374 RefSeq:NP_001070566.1
UniGene:Bt.11342 ProteinModelPortal:Q2HJ67 SMR:Q2HJ67 PRIDE:Q2HJ67
Ensembl:ENSBTAT00000016196 GeneID:768039 KEGG:bta:768039 CTD:3202
InParanoid:Q2HJ67 KO:K09305 NextBio:20918394 GO:GO:0060435
GO:GO:0060764 GO:GO:0060480 GO:GO:0060638 GO:GO:0060535
Uniprot:Q2HJ67
Length = 270
Score = 198 (74.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 199 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252
Score = 41 (19.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 100 GVHPHPTSPSTDYTTPLTALKYPPPAAL 127
G P P Y+ P T+ PPP L
Sbjct: 76 GASAAPAEPR--YSQPATSTHSPPPDPL 101
>UNIPROTKB|E2R5W8 [details] [associations]
symbol:HOXA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764
"cell-cell signaling involved in mammary gland development"
evidence=IEA] [GO:0060749 "mammary gland alveolus development"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0060638 "mesenchymal-epithelial
cell signaling" evidence=IEA] [GO:0060574 "intestinal epithelial
cell maturation" evidence=IEA] [GO:0060535 "trachea cartilage
morphogenesis" evidence=IEA] [GO:0060484 "lung-associated
mesenchyme development" evidence=IEA] [GO:0060480 "lung goblet cell
differentiation" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060435
"bronchiole development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048286 "lung
alveolus development" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IEA] [GO:0045639 "positive regulation of
myeloid cell differentiation" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0033599
"regulation of mammary gland epithelial cell proliferation"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:AAEX03009390 RefSeq:XP_539487.2
ProteinModelPortal:E2R5W8 SMR:E2R5W8 PRIDE:E2R5W8
Ensembl:ENSCAFT00000004723 GeneID:482370 KEGG:cfa:482370
NextBio:20856983 Uniprot:E2R5W8
Length = 270
Score = 198 (74.8 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 199 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252
Score = 41 (19.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 100 GVHPHPTSPSTDYTTPLTALKYPPPAAL 127
G P P Y+ P T+ PPP L
Sbjct: 76 GASAAPAEPR--YSQPATSTHSPPPDPL 101
>UNIPROTKB|F1P4V0 [details] [associations]
symbol:F1P4V0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
Length = 67
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 40/60 (66%), Positives = 53/60 (88%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT+F+ +QLTELEKEFHF++YL+RARR+E+A L+L + QVK+WFQNRRMKQKKR +E +
Sbjct: 5 RTSFSTRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKREREAL 64
>MGI|MGI:96207 [details] [associations]
symbol:Hoxd3 "homeobox D3" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=ISO] [GO:0007219 "Notch
signaling pathway" evidence=ISO] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
[GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IGI] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0051216 "cartilage development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96207 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0007160 GO:GO:0045666
GO:GO:0010628 GO:GO:0048704 GO:GO:0030878 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OrthoDB:EOG4S4PH1
CTD:3232 OMA:PECTMQK EMBL:U03485 EMBL:U03496 EMBL:X73573
EMBL:L24363 EMBL:U56400 EMBL:U56401 EMBL:AK138525 EMBL:M18169
IPI:IPI00132385 PIR:D29585 PIR:S34164 PIR:S47539 RefSeq:NP_034598.2
UniGene:Mm.430708 ProteinModelPortal:P09027 SMR:P09027
STRING:P09027 PhosphoSite:P09027 PRIDE:P09027
Ensembl:ENSMUST00000047830 Ensembl:ENSMUST00000053932
Ensembl:ENSMUST00000111982 Ensembl:ENSMUST00000111983 GeneID:15434
KEGG:mmu:15434 InParanoid:P09027 NextBio:288206 Bgee:P09027
CleanEx:MM_HOXD3 Genevestigator:P09027
GermOnline:ENSMUSG00000042464 Uniprot:P09027
Length = 433
Score = 208 (78.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 258
Query: 198 IL 199
IL
Sbjct: 259 IL 260
Score = 43 (20.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 107 SPSTD---YTTPLTALKYPPPAALSQHQS 132
S +TD Y+TP YPPPAA + S
Sbjct: 35 SKATDTYGYSTPHQP--YPPPAAANSLDS 61
>UNIPROTKB|H9L183 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0030099 "myeloid cell differentiation" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 OMA:WMRSSGT
EMBL:AADN02027109 EMBL:AADN02027110 Ensembl:ENSGALT00000029852
Uniprot:H9L183
Length = 217
Score = 198 (74.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 197
Score = 40 (19.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 88 TKVQIPSELSPLGVHPHPTS 107
+K Q S + P GV P TS
Sbjct: 12 SKYQAASSVFPSGVFPEQTS 31
>UNIPROTKB|P17509 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0034101 "erythrocyte homeostasis" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0048704 GO:GO:0034101
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AF287967
OrthoDB:EOG4G7C0G EMBL:X58431 EMBL:AJ270993 EMBL:AK292200
EMBL:BC014651 EMBL:M30597 EMBL:K02571 IPI:IPI00015075
IPI:IPI00216597 PIR:A05266 PIR:S26400 RefSeq:NP_061825.2
UniGene:Hs.98428 ProteinModelPortal:P17509 SMR:P17509 IntAct:P17509
MINT:MINT-1437085 STRING:P17509 PhosphoSite:P17509 DMDM:116242515
PRIDE:P17509 DNASU:3216 Ensembl:ENST00000225648
Ensembl:ENST00000484302 GeneID:3216 KEGG:hsa:3216 UCSC:uc002ins.1
UCSC:uc002int.1 CTD:3216 GeneCards:GC17M046673 HGNC:HGNC:5117
HPA:HPA042063 MIM:142961 neXtProt:NX_P17509 PharmGKB:PA29393
InParanoid:P17509 OMA:AEGSCAF PhylomeDB:P17509 GenomeRNAi:3216
NextBio:12796 Bgee:P17509 CleanEx:HS_HOXB6 Genevestigator:P17509
GermOnline:ENSG00000108511 Uniprot:P17509
Length = 224
Score = 199 (75.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 149 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 206
Score = 38 (18.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 9/28 (32%), Positives = 10/28 (35%)
Query: 98 PLGVHPHPTSPSTDYTTPLTALKYPPPA 125
PL +P P P Y PPA
Sbjct: 35 PLRHYPAPYGPGPGQDKGFATSSYYPPA 62
>UNIPROTKB|Q00056 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
Uniprot:Q00056
Length = 320
Score = 204 (76.9 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 272
Score = 35 (17.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 108 PSTDYTTPLTALK--YPPPAALSQH 130
P+ Y P TA + YP A H
Sbjct: 69 PTASYYAPRTAREPAYPAAALYPAH 93
Score = 35 (17.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 87 VTKVQIPSELSPLGVHPHPTSPSTDYTTPLT 117
V + Q+P L P V P P +P P T
Sbjct: 135 VLQPQLPPPLQPRAV-P-PAAPRRCEAAPAT 163
>UNIPROTKB|P13544 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
Uniprot:P13544
Length = 67
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 40/58 (68%), Positives = 52/58 (89%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
RT+F+ +QLTELEKEFHF++YL+RARR+E+A L+L + QVK+WFQNRRMKQKKR +E
Sbjct: 5 RTSFSTRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>UNIPROTKB|E1BZJ6 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0045446 "endothelial cell differentiation"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
IPI:IPI00588353 Ensembl:ENSGALT00000021590 ArrayExpress:E1BZJ6
Uniprot:E1BZJ6
Length = 265
Score = 200 (75.5 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 42/67 (62%), Positives = 48/67 (71%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 194 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 253
Query: 197 GILIGVG 203
L G
Sbjct: 254 MSLASAG 260
Score = 36 (17.7 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 20/61 (32%), Positives = 25/61 (40%)
Query: 69 VFSLSSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS 128
+F SS D+ V GE G + SP PHP +P + P K AAL
Sbjct: 83 LFQASS--DMSMV-GEDGSLHTENSESSSP---PPHPPTPKLAFFFPPGGKK----AALK 132
Query: 129 Q 129
Q
Sbjct: 133 Q 133
>UNIPROTKB|P52945 [details] [associations]
symbol:PDX1 "Pancreas/duodenum homeobox protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006006 "glucose
metabolic process" evidence=IEA] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0007417 "central nervous
system development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0009611 "response to
wounding" evidence=IEA] [GO:0010157 "response to chlorate"
evidence=IEA] [GO:0010260 "organ senescence" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0031017 "exocrine pancreas development" evidence=IEA]
[GO:0031100 "organ regeneration" evidence=IEA] [GO:0032024
"positive regulation of insulin secretion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0033273
"response to vitamin" evidence=IEA] [GO:0034097 "response to
cytokine stimulus" evidence=IEA] [GO:0035094 "response to nicotine"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043201
"response to leucine" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEA] [GO:0060290
"transdifferentiation" evidence=IEA] [GO:0070542 "response to fatty
acid" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006091 "generation of precursor
metabolites and energy" evidence=TAS] [GO:0009887 "organ
morphogenesis" evidence=TAS] [GO:0031018 "endocrine pancreas
development" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0007263
"nitric oxide mediated signal transduction" evidence=IDA]
[GO:0030073 "insulin secretion" evidence=IDA] [GO:0051594
"detection of glucose" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003309 "type B pancreatic cell differentiation"
evidence=ISS;IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0008284 EMBL:CH471075 GO:GO:0043565 GO:GO:0045944
GO:GO:0001889 GO:GO:0003700 GO:GO:0003682 GO:GO:0042593
GO:GO:0006006 GO:GO:0006091 Orphanet:552 Orphanet:99885
Pathway_Interaction_DB:hnf3bpathway Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0009887 GO:GO:0006366 MIM:125853 GO:GO:0007263 GO:GO:0016331
GO:GO:0048565 GO:GO:0030073 GO:GO:0031017 GO:GO:0003309
GO:GO:0051594 CleanEx:HS_PDX1 EMBL:U35632 EMBL:S82178 EMBL:S82168
EMBL:U30329 EMBL:X99894 EMBL:AF035260 EMBL:AF035259 EMBL:AF049893
EMBL:AL353195 IPI:IPI00006036 PIR:G01926 RefSeq:NP_000200.1
UniGene:Hs.32938 ProteinModelPortal:P52945 SMR:P52945 STRING:P52945
PhosphoSite:P52945 DMDM:1708540 PRIDE:P52945 DNASU:3651
Ensembl:ENST00000381033 GeneID:3651 KEGG:hsa:3651 UCSC:uc001urt.2
CTD:3651 GeneCards:GC13P028494 HGNC:HGNC:6107 HPA:CAB025873
MIM:260370 MIM:600733 MIM:606392 neXtProt:NX_P52945 Orphanet:2805
PharmGKB:PA162399173 eggNOG:NOG271681 HOGENOM:HOG000115484
HOVERGEN:HBG004525 InParanoid:P52945 KO:K07594 OMA:PYEVPPI
OrthoDB:EOG4M0F2P PhylomeDB:P52945 GenomeRNAi:3651 NextBio:14279
Bgee:P52945 Genevestigator:P52945 GermOnline:ENSG00000139515
Uniprot:P52945
Length = 283
Score = 190 (71.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 41/75 (54%), Positives = 49/75 (65%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N RT +T QL ELEKEF FNKY++R RR+E+A +L L E +KIWFQNRRMK KK
Sbjct: 146 NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEE 205
Query: 195 --KEGILIGVGEGSL 207
K G VG G +
Sbjct: 206 DKKRGGGTAVGGGGV 220
Score = 46 (21.3 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYT---TPLT-ALKYPP 123
P G +G + P ++SP V P P+ + P AL +PP
Sbjct: 49 PFPGALGALEQGSPPDISPYEVPPLADDPAVAHLHHHLPAQLALPHPP 96
>ZFIN|ZDB-GENE-000823-6 [details] [associations]
symbol:hoxb5b "homeo box B5b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0010002 "cardioblast differentiation" evidence=IMP] [GO:0007420
"brain development" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-6 GO:GO:0005634
GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0010002 GeneTree:ENSGT00700000104189
HOVERGEN:HBG016849 eggNOG:NOG236516 HOGENOM:HOG000231178
EMBL:AL645798 OrthoDB:EOG45MN66 EMBL:AF071253 EMBL:BC078285
EMBL:DQ060547 EMBL:X12803 EMBL:Y14526 IPI:IPI00489481
RefSeq:NP_571612.2 UniGene:Dr.75783 ProteinModelPortal:P09013
SMR:P09013 Ensembl:ENSDART00000076161 GeneID:58052 KEGG:dre:58052
CTD:58052 InParanoid:P09013 NextBio:20892316 Bgee:P09013
Uniprot:P09013
Length = 276
Score = 198 (74.8 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 205 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 258
Score = 37 (18.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 103 PHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTN 144
P P S +T T L P + S L NS +N
Sbjct: 93 PDPLSCATSDTLELKGSSPPSDQSTPTGNSRLTNSNNLTSSN 134
>UNIPROTKB|F1MD21 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 IPI:IPI00689409 UniGene:Bt.111374
OMA:NCGSGLN GO:GO:0021658 EMBL:DAAA02010939
Ensembl:ENSBTAT00000010699 Uniprot:F1MD21
Length = 372
Score = 224 (83.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 49/87 (56%), Positives = 59/87 (67%)
Query: 115 PLTALKYPPPAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRI 166
P +A PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 111 PASAASATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 170
Query: 167 EIASVLQLNETQVKIWFQNRRMKQKKR 193
EIA++L L E QVK+WFQNRRMK K++
Sbjct: 171 EIAALLDLTERQVKVWFQNRRMKHKRQ 197
>UNIPROTKB|Q0VCS4 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG321520 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT EMBL:BC120030 IPI:IPI00689409
RefSeq:NP_001069322.1 UniGene:Bt.111374 ProteinModelPortal:Q0VCS4
SMR:Q0VCS4 PRIDE:Q0VCS4 GeneID:524150 KEGG:bta:524150 CTD:3199
InParanoid:Q0VCS4 NextBio:20873901 Uniprot:Q0VCS4
Length = 372
Score = 224 (83.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 49/87 (56%), Positives = 59/87 (67%)
Query: 115 PLTALKYPPPAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRI 166
P +A PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 111 PASAASATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 170
Query: 167 EIASVLQLNETQVKIWFQNRRMKQKKR 193
EIA++L L E QVK+WFQNRRMK K++
Sbjct: 171 EIAALLDLTERQVKVWFQNRRMKHKRQ 197
>UNIPROTKB|F1RZF9 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
GO:GO:0030878 GeneTree:ENSGT00700000104189 InterPro:IPR025281
Pfam:PF13293 GO:GO:0021615 OMA:PECTMQK EMBL:CU570829
Ensembl:ENSSSCT00000017406 Uniprot:F1RZF9
Length = 435
Score = 208 (78.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 201 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 260
Query: 198 IL 199
IL
Sbjct: 261 IL 262
Score = 39 (18.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 121 YPPPAALS 128
YPPPAA S
Sbjct: 50 YPPPAAAS 57
>UNIPROTKB|E1BQ67 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
IPI:IPI00821744 Ensembl:ENSGALT00000018008 ArrayExpress:E1BQ67
Uniprot:E1BQ67
Length = 258
Score = 198 (74.8 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 194 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 247
Score = 36 (17.7 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 20/61 (32%), Positives = 25/61 (40%)
Query: 69 VFSLSSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS 128
+F SS D+ V GE G + SP PHP +P + P K AAL
Sbjct: 83 LFQASS--DMSMV-GEDGSLHTENSESSSP---PPHPPTPKLAFFFPPGGKK----AALK 132
Query: 129 Q 129
Q
Sbjct: 133 Q 133
>RGD|62387 [details] [associations]
symbol:Pdx1 "pancreatic and duodenal homeobox 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IDA] [GO:0001889 "liver development" evidence=IEA;ISO]
[GO:0003309 "type B pancreatic cell differentiation"
evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] [GO:0007263 "nitric oxide mediated signal
transduction" evidence=IEA;ISO] [GO:0007417 "central nervous system
development" evidence=IEP] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA;ISO] [GO:0009611 "response to
wounding" evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP;IMP] [GO:0010040 "response to iron(II) ion"
evidence=IEP] [GO:0010157 "response to chlorate" evidence=IEP]
[GO:0010260 "organ senescence" evidence=IEP] [GO:0010942 "positive
regulation of cell death" evidence=IMP] [GO:0014070 "response to
organic cyclic compound" evidence=IEP] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA;ISO] [GO:0030073 "insulin
secretion" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO;IMP] [GO:0031016 "pancreas development"
evidence=IEP;ISO] [GO:0031017 "exocrine pancreas development"
evidence=IEA;ISO] [GO:0031018 "endocrine pancreas development"
evidence=ISO] [GO:0031100 "organ regeneration" evidence=IEP]
[GO:0031667 "response to nutrient levels" evidence=IEP] [GO:0032024
"positive regulation of insulin secretion" evidence=IMP] [GO:0032403
"protein complex binding" evidence=IDA;IPI] [GO:0033273 "response to
vitamin" evidence=IEP] [GO:0033993 "response to lipid" evidence=IEP]
[GO:0034097 "response to cytokine stimulus" evidence=IEP]
[GO:0035094 "response to nicotine" evidence=IEP] [GO:0042127
"regulation of cell proliferation" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042593 "glucose homeostasis"
evidence=ISO;IMP] [GO:0043201 "response to leucine" evidence=IEP]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0043388
"positive regulation of DNA binding" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA;IMP] [GO:0046982
"protein heterodimerization activity" evidence=IDA] [GO:0048565
"digestive tract development" evidence=IEA;ISO] [GO:0048863 "stem
cell differentiation" evidence=IEP;IMP] [GO:0051384 "response to
glucocorticoid stimulus" evidence=IEP] [GO:0051594 "detection of
glucose" evidence=IDA] [GO:0060290 "transdifferentiation"
evidence=IEP] [GO:0070542 "response to fatty acid" evidence=IEP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA
binding transcription factor activity" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:62387
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0009611 GO:GO:0032403 GO:GO:0042493 GO:GO:0070542
GO:GO:0008284 GO:GO:0031100 GO:GO:0034097 GO:GO:0045944
GO:GO:0048863 GO:GO:0051384 GO:GO:0007417 GO:GO:0032024
GO:GO:0003700 GO:GO:0042593 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0010942
GO:GO:0035094 GO:GO:0046982 GO:GO:0007224 GO:GO:0001046
GO:GO:0043388 GO:GO:0060290 GO:GO:0010260 GO:GO:0003309
GO:GO:0051594 GO:GO:0033273 GO:GO:0043201 GO:GO:0010157 CTD:3651
HOVERGEN:HBG004525 KO:K07594 EMBL:U04833 EMBL:S67435 IPI:IPI00327500
PIR:S42634 RefSeq:NP_074043.3 UniGene:Rn.54603
ProteinModelPortal:P52947 SMR:P52947 MINT:MINT-1894530
PhosphoSite:P52947 GeneID:29535 KEGG:rno:29535 NextBio:609520
Genevestigator:P52947 Uniprot:P52947
Length = 283
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 41/81 (50%), Positives = 49/81 (60%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N RT +T QL ELEKEF FNKY++R RR+E+A +L L E +KIWFQNRRMK KK
Sbjct: 146 NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEE 205
Query: 195 KEGILIGVGEGSLMGAQGSSP 215
+ G G G G P
Sbjct: 206 DKKRSSGTTSG---GGGGEEP 223
Score = 45 (20.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 83 GEIGVTKVQIPSELSPLGVHP---HPTSPSTDYTTPLT-ALKYPPP 124
G +G + P ++SP V P P + P L +PPP
Sbjct: 52 GSLGTLEQGSPPDISPYEVPPLADDPAGAHLHHHLPAQLGLAHPPP 97
>UNIPROTKB|Q08727 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09302
HOVERGEN:HBG006088 CTD:3199 EMBL:X74323 IPI:IPI00584066 PIR:I50589
PIR:S35941 RefSeq:NP_990481.1 UniGene:Gga.524
ProteinModelPortal:Q08727 SMR:Q08727 GeneID:396055 KEGG:gga:396055
NextBio:20816115 Uniprot:Q08727
Length = 375
Score = 223 (83.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 52/109 (47%), Positives = 64/109 (58%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRAR 164
P S S P L + P + S + RT +TN QL ELEKEFHFNKYL R R
Sbjct: 111 PASASASAAGP-ACLSHKDPLEIPDSGSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPR 169
Query: 165 RIEIASVLQLNETQVKIWFQNRRMKQKKRI--KEGILIGVGEGSLMGAQ 211
R+EIA++L L E QVK+WFQNRRMK K++ KE GEG G++
Sbjct: 170 RVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKEN---QNGEGKFKGSE 215
>UNIPROTKB|E1C2J1 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0031017 "exocrine
pancreas development" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048565
"digestive tract development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0007263 "nitric oxide mediated signal transduction"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] [GO:0030073 "insulin secretion"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0008284
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
GO:GO:0042593 GO:GO:0006006 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0007263
GO:GO:0030073 GeneTree:ENSGT00700000104446 OMA:PYEVPPI
EMBL:AADN02005194 IPI:IPI00811289 Ensembl:ENSGALT00000036448
Uniprot:E1C2J1
Length = 224
Score = 187 (70.9 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
N RT +T QL ELEKEF FNKY++R RR+E+A +L L E +KIWFQNRRMK KK
Sbjct: 141 NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK 198
Score = 45 (20.9 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHP 103
P G +G + PS++SP V P
Sbjct: 43 PYPGSLGALEQGSPSDISPYEVPP 66
>UNIPROTKB|E1BBQ5 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0031018
"endocrine pancreas development" evidence=IEA] [GO:0031017
"exocrine pancreas development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030073 "insulin secretion"
evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0007263 "nitric oxide
mediated signal transduction" evidence=IEA] [GO:0006006 "glucose
metabolic process" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 CTD:3651 KO:K07594 OMA:PYEVPPI
EMBL:DAAA02033158 IPI:IPI00716405 RefSeq:NP_001179065.1
UniGene:Bt.87929 PRIDE:E1BBQ5 Ensembl:ENSBTAT00000014141
GeneID:538927 KEGG:bta:538927 NextBio:20877667 Uniprot:E1BBQ5
Length = 285
Score = 187 (70.9 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
N RT +T QL ELEKEF FNKY++R RR+E+A +L L E +KIWFQNRRMK KK
Sbjct: 148 NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK 205
Score = 45 (20.9 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYT---TPLT-ALKYPP 123
P G +G + P ++SP V P P+ + P AL +PP
Sbjct: 51 PFPGALGALEQGSPPDISPYEVPPLADDPAMAHLHHHLPAQLALAHPP 98
>UNIPROTKB|E1B856 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0007160 GO:GO:0045666 GO:GO:0010628 GO:GO:0048704
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 CTD:3232 OMA:PECTMQK
EMBL:DAAA02004173 IPI:IPI00709010 RefSeq:XP_002685351.1
RefSeq:XP_002703632.1 UniGene:Bt.105461 Ensembl:ENSBTAT00000006353
GeneID:100295744 KEGG:bta:100295744 Uniprot:E1B856
Length = 434
Score = 208 (78.3 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 200 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 259
Query: 198 IL 199
IL
Sbjct: 260 IL 261
Score = 36 (17.7 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 121 YPPPAA 126
YPPPAA
Sbjct: 50 YPPPAA 55
>UNIPROTKB|E2RI92 [details] [associations]
symbol:PDX1 "Pancreatic and duodenum homeobox 1"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0031017 "exocrine pancreas
development" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030073 "insulin secretion" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0007263 "nitric oxide mediated
signal transduction" evidence=IEA] [GO:0006006 "glucose metabolic
process" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008285 GO:GO:0030154
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0001889
GO:GO:0003700 GO:GO:0003682 GO:GO:0042593 GO:GO:0006006
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0007263 GO:GO:0031018 GO:GO:0016331
GO:GO:0048565 GO:GO:0030073 GO:GO:0031017
GeneTree:ENSGT00700000104446 CTD:3651 KO:K07594 OMA:PYEVPPI
EMBL:AAEX03014241 EMBL:HQ454506 RefSeq:XP_543155.3
UniGene:Cfa.16232 Ensembl:ENSCAFT00000010866 GeneID:493994
KEGG:cfa:493994 NextBio:20865524 Uniprot:E2RI92
Length = 282
Score = 192 (72.6 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 39/77 (50%), Positives = 49/77 (63%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRI 194
N RT +T QL ELEKEF FNKY++R RR+E+A +L L E +KIWFQNRRMK KK
Sbjct: 145 NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEE 204
Query: 195 KEGILIGVGEGSLMGAQ 211
+ G G + A+
Sbjct: 205 DKKRSCGTAPGGVADAE 221
Score = 39 (18.8 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHP 103
P G +G + P ++SP V P
Sbjct: 48 PFPGTLGALEQGSPPDISPYEVPP 71
>UNIPROTKB|F1RSW4 [details] [associations]
symbol:PDX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104446
OMA:PYEVPPI EMBL:FP236498 Ensembl:ENSSSCT00000010200
ArrayExpress:F1RSW4 Uniprot:F1RSW4
Length = 284
Score = 187 (70.9 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
N RT +T QL ELEKEF FNKY++R RR+E+A +L L E +KIWFQNRRMK KK
Sbjct: 147 NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKK 204
Score = 44 (20.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYT---TPLT-ALKYPP 123
P G +G + P ++SP V P P+ + P AL +PP
Sbjct: 50 PFAGALGALEQGGPPDISPYEVPPLADDPAVAHLHHHLPAQLALPHPP 97
Score = 38 (18.4 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 99 LGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQ 131
+G P P P + L AL+ P +S ++
Sbjct: 38 MGRQPPPPPPPPPFAGALGALEQGGPPDISPYE 70
>ZFIN|ZDB-GENE-990415-103 [details] [associations]
symbol:hoxb2a "homeo box B2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-103
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 EMBL:CR751227 IPI:IPI00491492
Ensembl:ENSDART00000146636 ArrayExpress:F1QMG2 Bgee:F1QMG2
Uniprot:F1QMG2
Length = 409
Score = 221 (82.9 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 59/120 (49%), Positives = 72/120 (60%)
Query: 105 PTSPSTDYTTPLTALKYPPPAALSQHQSLLNN-SG----RTNFTNKQLTELEKEFHFNKY 159
P+ S+ YTT L+ P ++ Q L+N SG RT +TN QL ELEKEFHFNKY
Sbjct: 149 PSQASSGYTT--AGLESP-----TEIQGGLDNVSGSRRLRTAYTNTQLLELEKEFHFNKY 201
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGS----LMGAQGSSP 215
L R RR+EIA++L L E QVK+WFQNRRMK K++ GE S L G SSP
Sbjct: 202 LCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHRDGQEGEPSGFDLLEGTDASSP 261
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 48/83 (57%), Positives = 56/83 (67%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK--- 195
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
Query: 196 EGILIGVGEGSLMGAQGSSPNGG 218
I G GS G G PNGG
Sbjct: 226 TKIRSGGAAGSAGGPPGR-PNGG 247
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 44/82 (53%), Positives = 55/82 (67%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK ++
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
Query: 197 GILIGVGEGSLMGAQGSSPNGG 218
+ G S G PNGG
Sbjct: 226 TKIRSGGPASAAGGPPGRPNGG 247
>UNIPROTKB|O43364 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0007379 "segment
specification" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 EMBL:CH471073
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045
GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 EMBL:AC004079 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 EMBL:BC130571
EMBL:BC136500 IPI:IPI00012049 RefSeq:NP_006726.1 UniGene:Hs.445239
UniGene:Hs.592177 ProteinModelPortal:O43364 SMR:O43364
STRING:O43364 PhosphoSite:O43364 PRIDE:O43364
Ensembl:ENST00000222718 GeneID:3199 KEGG:hsa:3199 UCSC:uc003syh.3
GeneCards:GC07M027106 HGNC:HGNC:5103 HPA:HPA029774 MIM:604685
MIM:612290 neXtProt:NX_O43364 Orphanet:93976 Orphanet:140963
PharmGKB:PA29380 InParanoid:O43364 OMA:NCGSGLN PhylomeDB:O43364
GenomeRNAi:3199 NextBio:12724 Bgee:O43364 CleanEx:HS_HOXA2
Genevestigator:O43364 GermOnline:ENSG00000105996 GO:GO:0021658
Uniprot:O43364
Length = 376
Score = 219 (82.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 47/78 (60%), Positives = 56/78 (71%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 124 PACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 183
Query: 176 ETQVKIWFQNRRMKQKKR 193
E QVK+WFQNRRMK K++
Sbjct: 184 ERQVKVWFQNRRMKHKRQ 201
>UNIPROTKB|F1SHT0 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 OMA:NCGSGLN GO:GO:0021658
EMBL:CU570959 RefSeq:XP_003134891.1 Ensembl:ENSSSCT00000018187
GeneID:100519993 KEGG:ssc:100519993 Uniprot:F1SHT0
Length = 380
Score = 219 (82.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 47/78 (60%), Positives = 56/78 (71%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 128 PACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 187
Query: 176 ETQVKIWFQNRRMKQKKR 193
E QVK+WFQNRRMK K++
Sbjct: 188 ERQVKVWFQNRRMKHKRQ 205
>UNIPROTKB|F1NH10 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000979 "RNA polymerase
II core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0021546 "rhombomere development" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0050767
"regulation of neurogenesis" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0060324 "face development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000979
GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
OMA:ATYYDNT IPI:IPI00594134 EMBL:AADN02027051
Ensembl:ENSGALT00000021935 Uniprot:F1NH10
Length = 377
Score = 218 (81.8 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 54/112 (48%), Positives = 69/112 (61%)
Query: 106 TSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 165
+SPST+ + K PP ++ S+ RT +T+ QL ELEKEFHFN+YL R RR
Sbjct: 139 SSPSTE---TCSGEKSPPGSSASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRR 188
Query: 166 IEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGSLMGAQGSSPNG 217
+E+A++L L+E Q+KIWFQNRRMK KK K G GS G G SP G
Sbjct: 189 VEMANLLNLSERQIKIWFQNRRMKYKKDQKSK-----GMGSSSG--GPSPTG 233
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 48/83 (57%), Positives = 56/83 (67%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK--- 195
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
Query: 196 EGILIGVGEGSLMGAQGSSPNGG 218
I G GS G G PNGG
Sbjct: 226 TKIRSGGTAGSAGGPPGR-PNGG 247
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 48/83 (57%), Positives = 56/83 (67%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK--- 195
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
Query: 196 EGILIGVGEGSLMGAQGSSPNGG 218
I G GS G G PNGG
Sbjct: 226 TKIRSGGTAGSAGGPPGR-PNGG 247
>UNIPROTKB|P23682 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 OrthoDB:EOG4S4PH1 EMBL:X74506
EMBL:X52749 IPI:IPI00594134 PIR:S10885 PIR:S71480
RefSeq:NP_990074.1 UniGene:Gga.2648 ProteinModelPortal:P23682
SMR:P23682 STRING:P23682 GeneID:395502 KEGG:gga:395502 CTD:3213
InParanoid:P23682 NextBio:20815581 Uniprot:P23682
Length = 399
Score = 218 (81.8 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 54/112 (48%), Positives = 69/112 (61%)
Query: 106 TSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 165
+SPST+ + K PP ++ S+ RT +T+ QL ELEKEFHFN+YL R RR
Sbjct: 140 SSPSTE---TCSGEKTPPGSSASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRR 189
Query: 166 IEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGSLMGAQGSSPNG 217
+E+A++L L+E Q+KIWFQNRRMK KK K G GS G G SP G
Sbjct: 190 VEMANLLNLSERQIKIWFQNRRMKYKKDQKSK-----GMGSSSG--GPSPTG 234
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 55/145 (37%), Positives = 74/145 (51%)
Query: 84 EIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNS------ 137
E G + S P +P PS ++ + YP + H S +N +
Sbjct: 104 EPGQRSEAVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKV--HVSTVNPNYAGGEP 161
Query: 138 --GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--R 193
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK +
Sbjct: 162 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 221
Query: 194 IKEGILIGVGEGSLMGAQGSSPNGG 218
+ + G G PNGG
Sbjct: 222 LPNTKIRSGGTAGAAGGPPGRPNGG 246
>MGI|MGI:106587 [details] [associations]
symbol:Msx3 "homeobox, msh-like 3" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0035067 "negative regulation of histone acetylation"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:106587
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0000976 GO:GO:0035067
GeneTree:ENSGT00700000104129 HOGENOM:HOG000231922
HOVERGEN:HBG005205 KO:K09341 EMBL:U62523 EMBL:AF060229
EMBL:BC051983 EMBL:X96518 EMBL:M38577 IPI:IPI00108205 PIR:PS0409
RefSeq:NP_034966.1 UniGene:Mm.4816 ProteinModelPortal:P70354
SMR:P70354 STRING:P70354 PRIDE:P70354 Ensembl:ENSMUST00000172775
GeneID:17703 KEGG:mmu:17703 CTD:17703 eggNOG:NOG237104
InParanoid:P70354 OMA:AAYGMYY OrthoDB:EOG4MPHRH NextBio:292302
Bgee:P70354 CleanEx:MM_MSX3 Genevestigator:P70354
GermOnline:ENSMUSG00000025469 Uniprot:P70354
Length = 204
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 57/131 (43%), Positives = 71/131 (54%)
Query: 70 FSLSSLRDLFPVKG-EIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS 128
FS+ SL + V G E G V+ P S G P P + S P PPP L
Sbjct: 28 FSVESLLEAERVPGSESGELGVERPLGASKPGAWPPPVAHSCPPRAPS-----PPPCTLR 82
Query: 129 QHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRM 188
+H++ N RT FT QL LE++FH +YL+ A R E +S L L ETQVKIWFQNRR
Sbjct: 83 KHKT--NRKPRTPFTTAQLLALERKFHQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRA 140
Query: 189 KQKKRIKEGIL 199
K K R++E L
Sbjct: 141 KAK-RLQEAEL 150
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 43/82 (52%), Positives = 54/82 (65%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK ++
Sbjct: 165 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 224
Query: 197 GILIGVGEGSLMGAQGSSPNGG 218
+ G G PNGG
Sbjct: 225 TKIRSGGTAGAAGGPPGRPNGG 246
>ZFIN|ZDB-GENE-990415-98 [details] [associations]
symbol:hoxa2b "homeo box A2b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-98 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG321520 KO:K09302 EMBL:AF307010 EMBL:AL645795
EMBL:DQ060536 EMBL:Y13945 IPI:IPI00486776 RefSeq:NP_571181.1
UniGene:Dr.82597 ProteinModelPortal:O42365 SMR:O42365 STRING:O42365
GeneID:30325 KEGG:dre:30325 CTD:30325 HOGENOM:HOG000063664
HOVERGEN:HBG006088 InParanoid:O42365 OrthoDB:EOG43TZVT
NextBio:20806759 ArrayExpress:O42365 Uniprot:O42365
Length = 363
Score = 215 (80.7 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 47/87 (54%), Positives = 57/87 (65%)
Query: 109 STDYTTPLTALKYPPPAA--LSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRI 166
ST TT L + P + +S S RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 105 STAATTDPGPLYFSPQGSPEISDGGSGATRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 164
Query: 167 EIASVLQLNETQVKIWFQNRRMKQKKR 193
EIA++L L E QVK+WFQNRRMK K++
Sbjct: 165 EIAALLDLTERQVKVWFQNRRMKHKRQ 191
>MGI|MGI:96174 [details] [associations]
symbol:Hoxa2 "homeobox A2" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007379 "segment specification" evidence=IMP] [GO:0007389
"pattern specification process" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IGI;IMP] [GO:0021568 "rhombomere 2
development" evidence=IMP] [GO:0021569 "rhombomere 3 development"
evidence=IGI] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IMP] [GO:0035284 "brain segmentation" evidence=IMP]
[GO:0042474 "middle ear morphogenesis" evidence=IGI;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045165 "cell fate commitment" evidence=IMP] [GO:0045665
"negative regulation of neuron differentiation" evidence=IGI;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96174 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520
GO:GO:0035284 GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:M95599 EMBL:M93148 EMBL:M93292 EMBL:BC117105
EMBL:BC117107 EMBL:M87801 EMBL:AB039191 IPI:IPI00132242 PIR:A42694
PIR:A46037 RefSeq:NP_034581.1 UniGene:Mm.131
ProteinModelPortal:P31245 SMR:P31245 IntAct:P31245 STRING:P31245
PhosphoSite:P31245 PRIDE:P31245 Ensembl:ENSMUST00000014848
GeneID:15399 KEGG:mmu:15399 UCSC:uc009bxz.1 InParanoid:P31245
NextBio:288090 Bgee:P31245 CleanEx:MM_HOXA2 Genevestigator:P31245
GermOnline:ENSMUSG00000014704 Uniprot:P31245
Length = 372
Score = 215 (80.7 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 46/78 (58%), Positives = 55/78 (70%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 120 PACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 179
Query: 176 ETQVKIWFQNRRMKQKKR 193
E QVK+WFQNRRMK K++
Sbjct: 180 ERQVKVWFQNRRMKHKRQ 197
>RGD|2813 [details] [associations]
symbol:Hoxa2 "homeo box A2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001709 "cell fate determination"
evidence=ISO] [GO:0002076 "osteoblast development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007379
"segment specification" evidence=ISO] [GO:0007389 "pattern
specification process" evidence=ISO] [GO:0008045 "motor neuron axon
guidance" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO] [GO:0021568 "rhombomere 2 development"
evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=ISO] [GO:0035284
"brain segmentation" evidence=ISO] [GO:0042474 "middle ear
morphogenesis" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0008045 GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT CTD:3199 GO:GO:0021658 EMBL:M91802 IPI:IPI00210902
PIR:I52196 RefSeq:NP_036713.2 UniGene:Rn.91077
ProteinModelPortal:P31246 SMR:P31246 STRING:P31246 GeneID:24452
KEGG:rno:24452 UCSC:RGD:2813 InParanoid:P31246 NextBio:603363
Genevestigator:P31246 GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 215 (80.7 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 46/78 (58%), Positives = 55/78 (70%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 120 PACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 179
Query: 176 ETQVKIWFQNRRMKQKKR 193
E QVK+WFQNRRMK K++
Sbjct: 180 ERQVKVWFQNRRMKHKRQ 197
>UNIPROTKB|P31246 [details] [associations]
symbol:Hoxa2 "Homeobox protein Hox-A2" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0008045 GO:GO:0002076 GO:GO:0007379
GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568 KO:K09302
HOGENOM:HOG000063664 HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199
GO:GO:0021658 EMBL:M91802 IPI:IPI00210902 PIR:I52196
RefSeq:NP_036713.2 UniGene:Rn.91077 ProteinModelPortal:P31246
SMR:P31246 STRING:P31246 GeneID:24452 KEGG:rno:24452 UCSC:RGD:2813
InParanoid:P31246 NextBio:603363 Genevestigator:P31246
GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 215 (80.7 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 46/78 (58%), Positives = 55/78 (70%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 120 PACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 179
Query: 176 ETQVKIWFQNRRMKQKKR 193
E QVK+WFQNRRMK K++
Sbjct: 180 ERQVKVWFQNRRMKHKRQ 197
>UNIPROTKB|E2R5Y1 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:AAEX03009390 RefSeq:XP_851905.1
Ensembl:ENSCAFT00000004713 GeneID:609592 KEGG:cfa:609592
NextBio:20895182 Uniprot:E2R5Y1
Length = 374
Score = 215 (80.7 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 46/78 (58%), Positives = 55/78 (70%)
Query: 124 PAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 175
PA L +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 122 PACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLT 181
Query: 176 ETQVKIWFQNRRMKQKKR 193
E QVK+WFQNRRMK K++
Sbjct: 182 ERQVKVWFQNRRMKHKRQ 199
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 54/114 (47%), Positives = 64/114 (56%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTP----LTALKYPP--PAALSQHQSLLN---NSG----- 138
P+ LS P P P+ P A K P P H S +N N G
Sbjct: 100 PAPLSGASASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRS 159
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 54/114 (47%), Positives = 64/114 (56%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTP----LTALKYPP--PAALSQHQSLLN---NSG----- 138
P+ LS P P P+ P A K P P H S +N N G
Sbjct: 100 PAPLSGASASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRS 159
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>UNIPROTKB|E2QT60 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 Ensembl:ENSCAFT00000026663
Uniprot:E2QT60
Length = 310
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 189
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 54/114 (47%), Positives = 64/114 (56%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTP----LTALKYPP--PAALSQHQSLLN---NSG----- 138
P+ LS P P P+ P A K P P H S +N N G
Sbjct: 100 PAPLSGASASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRS 159
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 54/114 (47%), Positives = 64/114 (56%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTP----LTALKYPP--PAALSQHQSLLN---NSG----- 138
P+ LS P P P+ P A K P P H S +N N G
Sbjct: 100 PAPLSGASASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRS 159
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 54/114 (47%), Positives = 64/114 (56%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTP----LTALKYPP--PAALSQHQSLLN---NSG----- 138
P+ LS P P P+ P A K P P H S +N N G
Sbjct: 100 PAPLSGTSASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRS 159
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>RGD|2319509 [details] [associations]
symbol:Hoxb2 "homeobox B2" species:10116 "Rattus norvegicus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
[GO:0021570 "rhombomere 4 development" evidence=ISO] [GO:0021612
"facial nerve structural organization" evidence=ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=ISO] [GO:0048705
"skeletal system morphogenesis" evidence=ISO] [GO:0048857 "neural
nucleus development" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:2319509 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09302 CTD:3212 UniGene:Rn.231109
GeneID:100361765 KEGG:rno:100361765 EMBL:DQ399532 IPI:IPI00370818
RefSeq:NP_001040556.1 ProteinModelPortal:Q20A34 SMR:Q20A34
NextBio:651428 Genevestigator:Q20A34 Uniprot:Q20A34
Length = 305
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 131 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 185
>ZFIN|ZDB-GENE-990415-104 [details] [associations]
symbol:hoxb3a "homeo box B3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-104
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 EMBL:AJ537509 EMBL:AL645782
EMBL:BC095559 EMBL:Y13944 EMBL:BK005081 EMBL:BK005082
IPI:IPI00486662 RefSeq:NP_571192.2 UniGene:Dr.132502
ProteinModelPortal:O42368 SMR:O42368 STRING:O42368
Ensembl:ENSDART00000078466 GeneID:30339 KEGG:dre:30339 CTD:30339
InParanoid:O42368 OMA:ATYYDNT OrthoDB:EOG4S4PH1 NextBio:20806770
ArrayExpress:O42368 Bgee:O42368 Uniprot:O42368
Length = 417
Score = 216 (81.1 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 51/98 (52%), Positives = 63/98 (64%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+
Sbjct: 172 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQI 224
Query: 180 KIWFQNRRMKQKKRIKEGILIGVGEGSLMGAQGSSPNG 217
KIWFQNRRMK KK K G+G S G G SP G
Sbjct: 225 KIWFQNRRMKYKKDQKSK---GIGSSS--G--GPSPTG 255
>UNIPROTKB|E2R5U1 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
CTD:3204 KO:K09307 OMA:EHKDEGP EMBL:AAEX03009390 RefSeq:XP_864678.2
Ensembl:ENSCAFT00000004737 GeneID:482371 KEGG:cfa:482371
Uniprot:E2R5U1
Length = 239
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 45/78 (57%), Positives = 52/78 (66%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K E
Sbjct: 133 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 192
Query: 197 GILIGVGEGSLMGAQGSS 214
G EG++ A ++
Sbjct: 193 GPAAAAPEGAVPTAAAAA 210
>UNIPROTKB|J9P833 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
Ensembl:ENSCAFT00000049441 Uniprot:J9P833
Length = 222
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 46/88 (52%), Positives = 52/88 (59%)
Query: 108 PSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIE 167
P+ P YP L RT++T Q ELEKEFHFN+YLTR RRIE
Sbjct: 128 PAARSQPPAPPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIE 187
Query: 168 IASVLQLNETQVKIWFQNRRMKQKKRIK 195
IA+ L LNE Q+KIWFQNRRMK KK K
Sbjct: 188 IANNLCLNERQIKIWFQNRRMKWKKDSK 215
>UNIPROTKB|B7Z5N8 [details] [associations]
symbol:HOXB3 "cDNA FLJ51054, highly similar to Homeobox
protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114 ChiTaRS:HOXB3
GO:GO:0021546 EMBL:AK299226 IPI:IPI00947370 SMR:B7Z5N8
STRING:B7Z5N8 Ensembl:ENST00000460160 Ensembl:ENST00000485909
Uniprot:B7Z5N8
Length = 299
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+
Sbjct: 48 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQI 100
Query: 180 KIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
KIWFQNRRMK KK K +G+ G S G+
Sbjct: 101 KIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 132
>UNIPROTKB|F8VXG0 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
InterPro:IPR025281 Pfam:PF13293 EMBL:AC103702 HGNC:HGNC:5114
ChiTaRS:HOXB3 IPI:IPI01022378 ProteinModelPortal:F8VXG0 SMR:F8VXG0
Ensembl:ENST00000490677 ArrayExpress:F8VXG0 Bgee:F8VXG0
Uniprot:F8VXG0
Length = 297
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+
Sbjct: 46 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQI 98
Query: 180 KIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
KIWFQNRRMK KK K +G+ G S G+
Sbjct: 99 KIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 130
>UNIPROTKB|G3V8C7 [details] [associations]
symbol:Msx3 "RCG48500, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0035067 "negative regulation of histone
acetylation" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:620932
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473953
KO:K09341 CTD:17703 OMA:AAYGMYY RefSeq:NP_446164.1 UniGene:Rn.92366
Ensembl:ENSRNOT00000024680 GeneID:114504 KEGG:rno:114504
NextBio:618589 Uniprot:G3V8C7
Length = 204
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 56/131 (42%), Positives = 71/131 (54%)
Query: 70 FSLSSLRDLFPVKG-EIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS 128
FS+ SL + V+G E G + P S G P P + S P PPP L
Sbjct: 28 FSVESLLEAERVRGSESGELGEERPPGASKPGAWPPPVAHSCPPRAPS-----PPPCTLR 82
Query: 129 QHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRM 188
+H++ N RT FT QL LE++FH +YL+ A R E +S L L ETQVKIWFQNRR
Sbjct: 83 KHKT--NRKPRTPFTTAQLLALERKFHQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRA 140
Query: 189 KQKKRIKEGIL 199
K K R++E L
Sbjct: 141 KAK-RLQEAEL 150
>UNIPROTKB|E1BHR6 [details] [associations]
symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
Length = 222
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 44/75 (58%), Positives = 49/75 (65%)
Query: 121 YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
YP L RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+K
Sbjct: 141 YPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIK 200
Query: 181 IWFQNRRMKQKKRIK 195
IWFQNRRMK KK K
Sbjct: 201 IWFQNRRMKWKKDSK 215
>UNIPROTKB|Q00444 [details] [associations]
symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
GermOnline:ENSG00000172789 Uniprot:Q00444
Length = 222
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 44/75 (58%), Positives = 49/75 (65%)
Query: 121 YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
YP L RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+K
Sbjct: 141 YPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIK 200
Query: 181 IWFQNRRMKQKKRIK 195
IWFQNRRMK KK K
Sbjct: 201 IWFQNRRMKWKKDSK 215
>UNIPROTKB|F1SHT4 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656 EMBL:CU570959
Ensembl:ENSSSCT00000018182 Uniprot:F1SHT4
Length = 241
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 46/79 (58%), Positives = 53/79 (67%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K E
Sbjct: 133 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 192
Query: 197 GILIGVG-EGSLMGAQGSS 214
G V EG++ A ++
Sbjct: 193 GPAAAVAPEGAVPAAAAAA 211
>UNIPROTKB|I3LKE3 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 EMBL:CU570959 RefSeq:XP_003134888.1
Ensembl:ENSSSCT00000030592 GeneID:100519456 KEGG:ssc:100519456
Uniprot:I3LKE3
Length = 234
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 46/79 (58%), Positives = 53/79 (67%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K E
Sbjct: 133 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 192
Query: 197 GILIGVG-EGSLMGAQGSS 214
G V EG++ A ++
Sbjct: 193 GPAAAVAPEGAVPAAAAAA 211
>UNIPROTKB|I3LRP3 [details] [associations]
symbol:LOC100627840 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
KEGG:ssc:100627840 Uniprot:I3LRP3
Length = 222
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 44/75 (58%), Positives = 49/75 (65%)
Query: 121 YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
YP L RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+K
Sbjct: 141 YPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIK 200
Query: 181 IWFQNRRMKQKKRIK 195
IWFQNRRMK KK K
Sbjct: 201 IWFQNRRMKWKKDSK 215
>MGI|MGI:96196 [details] [associations]
symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
GermOnline:ENSMUSG00000022485 Uniprot:P32043
Length = 222
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 44/75 (58%), Positives = 49/75 (65%)
Query: 121 YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
YP L RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+K
Sbjct: 141 YPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIK 200
Query: 181 IWFQNRRMKQKKRIK 195
IWFQNRRMK KK K
Sbjct: 201 IWFQNRRMKWKKDSK 215
>MGI|MGI:96208 [details] [associations]
symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
Genevestigator:P10628 Uniprot:P10628
Length = 250
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 53/111 (47%), Positives = 63/111 (56%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPP---PAALSQHQSLLNNS--------GRTN 141
P+ L PT P P TALK P P H + +N + RT
Sbjct: 101 PAPLPGARACSQPTGPKQP--PPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTA 158
Query: 142 FTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
+T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 YTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 209
>RGD|1307584 [details] [associations]
symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048706 "embryonic skeletal system development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
NextBio:669109 Uniprot:D3ZP88
Length = 222
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 44/75 (58%), Positives = 49/75 (65%)
Query: 121 YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
YP L RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+K
Sbjct: 141 YPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIK 200
Query: 181 IWFQNRRMKQKKRIK 195
IWFQNRRMK KK K
Sbjct: 201 IWFQNRRMKWKKDSK 215
>RGD|1309690 [details] [associations]
symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
Uniprot:D4ACE1
Length = 251
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 53/111 (47%), Positives = 63/111 (56%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPP---PAALSQHQSLLNNS--------GRTN 141
P+ L PT P P TALK P P H + +N + RT
Sbjct: 101 PAPLPGARACSQPTGPKQP--PPGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTA 158
Query: 142 FTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
+T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 159 YTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 209
>UNIPROTKB|F6UWJ9 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104446 KO:K09302 CTD:3212 OMA:RAAWEAC
Ensembl:ENSCAFT00000026663 EMBL:AAEX03006513 RefSeq:XP_851108.1
GeneID:608880 KEGG:cfa:608880 Uniprot:F6UWJ9
Length = 342
Score = 211 (79.3 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 143 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 197
>UNIPROTKB|F1RWG7 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048857 "neural
nucleus development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0021612 "facial nerve
structural organization" evidence=IEA] [GO:0021570 "rhombomere 4
development" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704 GO:GO:0002011
GO:GO:0021612 GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569
GO:GO:0021570 OMA:RAAWEAC GO:GO:0048857 EMBL:CU856160
RefSeq:XP_003131594.1 Ensembl:ENSSSCT00000019087 GeneID:100521989
KEGG:ssc:100521989 Uniprot:F1RWG7
Length = 353
Score = 211 (79.3 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 199
>UNIPROTKB|E1BGM6 [details] [associations]
symbol:HOXB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048857 "neural
nucleus development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0021612 "facial nerve
structural organization" evidence=IEA] [GO:0021570 "rhombomere 4
development" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0002011 "morphogenesis of an
epithelial sheet" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704 GO:GO:0002011
GO:GO:0021612 GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569
GO:GO:0021570 CTD:3212 OMA:RAAWEAC GO:GO:0048857 EMBL:DAAA02049068
IPI:IPI00706154 RefSeq:NP_001178264.1 UniGene:Bt.17183
Ensembl:ENSBTAT00000013159 GeneID:616129 KEGG:bta:616129
NextBio:20899975 Uniprot:E1BGM6
Length = 354
Score = 211 (79.3 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 198
>MGI|MGI:96183 [details] [associations]
symbol:Hoxb2 "homeobox B2" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI] [GO:0021569 "rhombomere 3 development" evidence=IGI]
[GO:0021570 "rhombomere 4 development" evidence=IGI] [GO:0021612
"facial nerve structural organization" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI] [GO:0048705
"skeletal system morphogenesis" evidence=IGI;IMP] [GO:0048857
"neural nucleus development" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96183 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0048704 GO:GO:0002011 GO:GO:0021612
GeneTree:ENSGT00700000104446 KO:K09302 GO:GO:0021569 GO:GO:0021570
HOGENOM:HOG000063664 HOVERGEN:HBG006088 CTD:3212 eggNOG:NOG295272
OMA:RAAWEAC OrthoDB:EOG4QC167 GO:GO:0048857 EMBL:AL606824
EMBL:BC138494 EMBL:BC138495 IPI:IPI00124385 RefSeq:NP_598793.2
UniGene:Mm.281153 ProteinModelPortal:P0C1T1 SMR:P0C1T1
STRING:P0C1T1 PhosphoSite:P0C1T1 PRIDE:P0C1T1
Ensembl:ENSMUST00000100523 GeneID:103889 KEGG:mmu:103889
UCSC:uc007lby.1 InParanoid:P0C1T1 NextBio:356175 Bgee:P0C1T1
CleanEx:MM_HOXB2 Genevestigator:P0C1T1 Uniprot:P0C1T1
Length = 354
Score = 211 (79.3 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 199
>UNIPROTKB|P14652 [details] [associations]
symbol:HOXB2 "Homeobox protein Hox-B2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021569 "rhombomere 3 development"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021612 "facial nerve structural organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048857 "neural nucleus development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=TAS] [GO:0008015 "blood circulation"
evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0009952 GO:GO:0008015 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0048704
GO:GO:0002011 GO:GO:0021612 KO:K09302 GO:GO:0021569 GO:GO:0021570
HOGENOM:HOG000063664 HOVERGEN:HBG006088 EMBL:X16665 EMBL:BC074805
EMBL:BC074806 EMBL:X16176 EMBL:X14571 EMBL:X78978 IPI:IPI00027261
PIR:S07542 RefSeq:NP_002136.1 UniGene:Hs.514289
ProteinModelPortal:P14652 SMR:P14652 IntAct:P14652 STRING:P14652
PhosphoSite:P14652 DMDM:123270 PRIDE:P14652 DNASU:3212
Ensembl:ENST00000330070 GeneID:3212 KEGG:hsa:3212 UCSC:uc002inm.3
CTD:3212 GeneCards:GC17M046620 HGNC:HGNC:5113 MIM:142967
neXtProt:NX_P14652 PharmGKB:PA29389 eggNOG:NOG295272
InParanoid:P14652 OMA:RAAWEAC OrthoDB:EOG4QC167 PhylomeDB:P14652
GenomeRNAi:3212 NextBio:12780 ArrayExpress:P14652 Bgee:P14652
CleanEx:HS_HOXB2 Genevestigator:P14652 GermOnline:ENSG00000173917
GO:GO:0048857 Uniprot:P14652
Length = 356
Score = 211 (79.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E QVK+WFQNRRMK K++
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQ 201
>UNIPROTKB|E1B8D8 [details] [associations]
symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045656 "negative regulation of monocyte
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0002686 "negative regulation of
leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
Length = 238
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 45/79 (56%), Positives = 51/79 (64%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK KE
Sbjct: 133 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEE 192
Query: 198 --ILIGVGEGSLMGAQGSS 214
G EG+ A ++
Sbjct: 193 SPAASGAPEGAAPAASAAA 211
>UNIPROTKB|P31267 [details] [associations]
symbol:HOXA6 "Homeobox protein Hox-A6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 EMBL:AC004080 HOVERGEN:HBG016849
CTD:3203 KO:K09306 EMBL:BC069497 EMBL:BC104915 EMBL:BC104917
IPI:IPI00010742 PIR:S15538 RefSeq:NP_076919.1 UniGene:Hs.679517
ProteinModelPortal:P31267 SMR:P31267 STRING:P31267
PhosphoSite:P31267 DMDM:17378385 PRIDE:P31267 DNASU:3203
Ensembl:ENST00000222728 GeneID:3203 KEGG:hsa:3203 UCSC:uc003syo.2
GeneCards:GC07M027185 HGNC:HGNC:5107 HPA:HPA004203 MIM:142951
neXtProt:NX_P31267 PharmGKB:PA29384 eggNOG:NOG305812
InParanoid:P31267 OMA:PEQQYKS OrthoDB:EOG4C5CKB PhylomeDB:P31267
GenomeRNAi:3203 NextBio:12744 Bgee:P31267 CleanEx:HS_HOXA6
Genevestigator:P31267 GermOnline:ENSG00000106006 Uniprot:P31267
Length = 233
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 50/107 (46%), Positives = 59/107 (55%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNS----GRTNFTNKQLT 148
P S G H YT+P+ YP ++ + S GR +T Q
Sbjct: 113 PDSSSGQGKALHDEGADRKYTSPV----YPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTL 168
Query: 149 ELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK K
Sbjct: 169 ELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 215
>RGD|1590236 [details] [associations]
symbol:Hoxa6 "homeobox A6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISO] [GO:0048706 "embryonic skeletal system development"
evidence=ISO] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1590236 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 CTD:3203
KO:K09306 OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:CH474011
EMBL:AC122669 RefSeq:NP_001178016.1 RefSeq:XP_003749802.1
RefSeq:XP_003752227.1 UniGene:Rn.213374 Ensembl:ENSRNOT00000008542
GeneID:100909604 GeneID:100911511 GeneID:685732 KEGG:rno:100909604
KEGG:rno:100911511 KEGG:rno:685732 NextBio:730342 Uniprot:G3V6T4
Length = 233
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 50/107 (46%), Positives = 59/107 (55%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNS----GRTNFTNKQLT 148
P S G H YT+P+ YP ++ + S GR +T Q
Sbjct: 113 PDSSSVQGKALHEEGTDRKYTSPV----YPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTL 168
Query: 149 ELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK K
Sbjct: 169 ELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 215
>ZFIN|ZDB-GENE-980526-533 [details] [associations]
symbol:hoxc5a "homeo box C5a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-533 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 HOVERGEN:HBG016849
HOGENOM:HOG000231178 EMBL:BX005254 EMBL:BC163205 IPI:IPI00499962
UniGene:Dr.132198 Ensembl:ENSDART00000103038 Uniprot:B3DIP7
Length = 233
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 44/75 (58%), Positives = 49/75 (65%)
Query: 121 YPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
YP L RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q+K
Sbjct: 152 YPWMTKLHMSHESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIK 211
Query: 181 IWFQNRRMKQKKRIK 195
IWFQNRRMK KK K
Sbjct: 212 IWFQNRRMKWKKDSK 226
>UNIPROTKB|F1P8H3 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 CTD:3234
OMA:GQEYFHP EMBL:AAEX03017789 RefSeq:XP_003434266.1
ProteinModelPortal:F1P8H3 Ensembl:ENSCAFT00000021331
GeneID:100687992 KEGG:cfa:100687992 Uniprot:F1P8H3
Length = 199
Score = 179 (68.1 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 36/55 (65%), Positives = 40/55 (72%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
GR ++ Q ELEKEF FN YLTR RRIE++ L L E QVKIWFQNRRMK KK
Sbjct: 109 GRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 163
Score = 42 (19.8 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 102 HPHPTSPSTDYTTPLTALKYPPP 124
HP SP+T Y T ++P P
Sbjct: 4 HPGGGSPATAYQTAPPPPRHPRP 26
>UNIPROTKB|E1B7T2 [details] [associations]
symbol:LOC100848736 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:DAAA02010938 IPI:IPI00708268
Ensembl:ENSBTAT00000033679 Uniprot:E1B7T2
Length = 249
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 50/107 (46%), Positives = 59/107 (55%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNS----GRTNFTNKQLT 148
P S G H YT+P+ YP ++ + S GR +T Q
Sbjct: 113 PDSSSVPGKALHDEGTDRKYTSPV----YPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTL 168
Query: 149 ELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK K
Sbjct: 169 ELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 215
>UNIPROTKB|E2R5W2 [details] [associations]
symbol:HOXA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 CTD:3203 KO:K09306
OMA:PEQQYKS GeneTree:ENSGT00700000104332 EMBL:AAEX03009390
RefSeq:XP_854141.1 ProteinModelPortal:E2R5W2
Ensembl:ENSCAFT00000004729 GeneID:611383 KEGG:cfa:611383
NextBio:20896920 Uniprot:E2R5W2
Length = 233
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 50/107 (46%), Positives = 59/107 (55%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNS----GRTNFTNKQLT 148
P S G H YT+P+ YP ++ + S GR +T Q
Sbjct: 113 PDSSSVPGKALHDEGTDRKYTSPV----YPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTL 168
Query: 149 ELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK K
Sbjct: 169 ELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 215
>UNIPROTKB|F1SHT3 [details] [associations]
symbol:HOXA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 KO:K09306 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:CU570959 RefSeq:XP_003134887.1
Ensembl:ENSSSCT00000018183 GeneID:100519284 KEGG:ssc:100519284
Uniprot:F1SHT3
Length = 233
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 50/107 (46%), Positives = 59/107 (55%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNS----GRTNFTNKQLT 148
P S G H YT+P+ YP ++ + S GR +T Q
Sbjct: 113 PDSSSGPGKGLHDEGTDRKYTSPV----YPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTL 168
Query: 149 ELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK K
Sbjct: 169 ELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 215
>ZFIN|ZDB-GENE-990415-106 [details] [associations]
symbol:hoxb6a "homeo box B6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-106 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG305812 EMBL:AL645782
EMBL:X68248 EMBL:X17267 EMBL:DQ060541 IPI:IPI00512770 PIR:S32563
RefSeq:NP_571194.1 UniGene:Dr.132967 ProteinModelPortal:P15861
SMR:P15861 GeneID:30341 KEGG:dre:30341 CTD:30341 InParanoid:P15861
OrthoDB:EOG4G7C0G NextBio:20806772 ArrayExpress:P15861
Uniprot:P15861
Length = 228
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 47/91 (51%), Positives = 54/91 (59%)
Query: 108 PSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTN---FTNKQLTELEKEFHFNKYLTRAR 164
P D P +A YP ++ N+GR +T Q ELEKEFHFN+YLTR R
Sbjct: 121 PEADEQKP-SAPVYPWMQRMNSCNGTFGNAGRRGRQTYTRYQTLELEKEFHFNRYLTRRR 179
Query: 165 RIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 180 RIEIAHALCLTERQIKIWFQNRRMKWKKENK 210
>UNIPROTKB|B7ZAD0 [details] [associations]
symbol:HOXB3 "cDNA, FLJ79144, highly similar to Homeobox
protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114
ChiTaRS:HOXB3 GO:GO:0021546 EMBL:AK316245 IPI:IPI00947155
SMR:B7ZAD0 STRING:B7ZAD0 Ensembl:ENST00000472863
Ensembl:ENST00000489475 Uniprot:B7ZAD0
Length = 358
Score = 210 (79.0 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+
Sbjct: 107 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQI 159
Query: 180 KIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
KIWFQNRRMK KK K +G+ G S G+
Sbjct: 160 KIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 191
>FB|FBgn0001077 [details] [associations]
symbol:ftz "fushi tarazu" species:7227 "Drosophila
melanogaster" [GO:0007506 "gonadal mesoderm development"
evidence=IMP] [GO:0008354 "germ cell migration" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS;IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC;NAS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000980 "RNA
polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0007366 "periodic partitioning by pair rule gene"
evidence=NAS;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0007350 "blastoderm segmentation" evidence=TAS]
[GO:0001708 "cell fate specification" evidence=TAS] [GO:0007417
"central nervous system development" evidence=TAS] [GO:0035289
"posterior head segmentation" evidence=TAS] [GO:0035290 "trunk
segmentation" evidence=TAS] [GO:0035282 "segmentation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
GO:GO:0007417 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
GO:GO:0003705 GO:GO:0007506 GO:GO:0000980 GO:GO:0001077
GO:GO:0000122 GO:GO:0007366 EMBL:AE001572 GO:GO:0035289
GO:GO:0008354 GO:GO:0035290 PDB:2XHS PDBsum:2XHS EMBL:X00854
EMBL:BT022173 EMBL:X78905 EMBL:K01947 PIR:A93334 RefSeq:NP_477498.1
UniGene:Dm.24032 PDB:1FTZ PDBsum:1FTZ ProteinModelPortal:P02835
SMR:P02835 DIP:DIP-18500N IntAct:P02835 MINT:MINT-156974
STRING:P02835 EnsemblMetazoa:FBtr0081625 GeneID:40834
KEGG:dme:Dmel_CG2047 CTD:40834 FlyBase:FBgn0001077 eggNOG:NOG249057
InParanoid:P02835 OMA:NRYITRR OrthoDB:EOG44TMQT PhylomeDB:P02835
EvolutionaryTrace:P02835 GenomeRNAi:40834 NextBio:820846
Bgee:P02835 GermOnline:CG2047 InterPro:IPR005567 Pfam:PF03867
Uniprot:P02835
Length = 410
Score = 196 (74.1 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
R +T Q ELEKEFHFN+Y+TR RRI+IA+ L L+E Q+KIWFQNRRMK KK
Sbjct: 258 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
Score = 36 (17.7 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 101 VHPHPTSPSTDYTTPLTALKYPP 123
V P++ T P+ LKY P
Sbjct: 102 VEERPSTLRALLTNPVKKLKYTP 124
>WB|WBGene00000436 [details] [associations]
symbol:ceh-12 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080753 EMBL:X17076 PIR:S09504
PIR:T32764 RefSeq:NP_491693.1 UniGene:Cel.19039
ProteinModelPortal:P17487 SMR:P17487 EnsemblMetazoa:F33D11.4
GeneID:172255 KEGG:cel:CELE_F33D11.4 UCSC:F33D11.4 CTD:172255
WormBase:F33D11.4 eggNOG:NOG284589 HOGENOM:HOG000017276
InParanoid:P17487 NextBio:874695 Uniprot:P17487
Length = 180
Score = 176 (67.0 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT F+++QL +LEK+F N+YL+R RR ++A L L+ETQ+KIWFQNRRMK K+
Sbjct: 114 RTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167
Score = 44 (20.5 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 94 SELSPLGVHPHPTSPSTDYTTPLTA--LKYPPPAALSQHQSLLNNS 137
+E L HP P S +Y+T + +K AA Q+ L NS
Sbjct: 18 NEDQKLESHPSPPSQIPNYSTSCSEELMKMAAKAAQFAAQASLENS 63
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/63 (65%), Positives = 50/63 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
G T +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +
Sbjct: 14 GCTAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
Query: 197 GIL 199
GIL
Sbjct: 74 GIL 76
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/63 (65%), Positives = 50/63 (79%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
G T +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +
Sbjct: 14 GCTAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
Query: 197 GIL 199
GIL
Sbjct: 74 GIL 76
>UNIPROTKB|A5PKI4 [details] [associations]
symbol:HOXB3 "HOXB3 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0050767
"regulation of neurogenesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
nerve morphogenesis" evidence=IEA] [GO:0021546 "rhombomere
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:DAAA02049067
EMBL:BC142499 IPI:IPI00706525 RefSeq:NP_001092644.1
UniGene:Bt.27955 SMR:A5PKI4 Ensembl:ENSBTAT00000028563
GeneID:618214 KEGG:bta:618214 InParanoid:A5PKI4 NextBio:20901061
Uniprot:A5PKI4
Length = 426
Score = 211 (79.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 49/97 (50%), Positives = 63/97 (64%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+
Sbjct: 175 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQI 227
Query: 180 KIWFQNRRMKQKKRIK-EGILIGVGEGSLMGAQGSSP 215
KIWFQNRRMK KK K +G+ G S G+ S P
Sbjct: 228 KIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSP-SQP 263
>UNIPROTKB|P31268 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048863 "stem cell differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0001525
"angiogenesis" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0002686 "negative regulation of leukocyte
migration" evidence=IDA] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IDA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122
GO:GO:0001953 GO:GO:0048704 eggNOG:NOG238660 EMBL:AC004080
HOVERGEN:HBG016849 CTD:3204 KO:K09307 EMBL:AF026397 EMBL:AJ005814
EMBL:AF032095 EMBL:X84803 EMBL:X84804 EMBL:U92543 IPI:IPI00010743
PIR:S15536 RefSeq:NP_008827.2 UniGene:Hs.610216 UniGene:Hs.660918
ProteinModelPortal:P31268 SMR:P31268 IntAct:P31268 STRING:P31268
PhosphoSite:P31268 DMDM:311033439 PRIDE:P31268 DNASU:3204
Ensembl:ENST00000242159 GeneID:3204 KEGG:hsa:3204 UCSC:uc003sys.3
GeneCards:GC07M027193 HGNC:HGNC:5108 MIM:142950 neXtProt:NX_P31268
PharmGKB:PA29385 InParanoid:P31268 OMA:EHKDEGP OrthoDB:EOG4C87V5
PhylomeDB:P31268 GenomeRNAi:3204 NextBio:12748 ArrayExpress:P31268
Bgee:P31268 CleanEx:HS_HOXA7 Genevestigator:P31268
GermOnline:ENSG00000122592 GO:GO:0045617 GO:GO:0045656
Uniprot:P31268
Length = 230
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 45/79 (56%), Positives = 52/79 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K E
Sbjct: 133 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 192
Query: 197 GILIGVG-EGSLMGAQGSS 214
G EG++ A ++
Sbjct: 193 GPTAAAAPEGAVPSAAATA 211
>UNIPROTKB|Q9H4S2 [details] [associations]
symbol:GSX1 "GS homeobox 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
GO:GO:0048663 GO:GO:0021854 EMBL:AB044157 EMBL:AB044158
EMBL:AL390738 IPI:IPI00028199 RefSeq:NP_663632.1 UniGene:Hs.351785
ProteinModelPortal:Q9H4S2 SMR:Q9H4S2 STRING:Q9H4S2 DMDM:27923786
PRIDE:Q9H4S2 DNASU:219409 Ensembl:ENST00000302945 GeneID:219409
KEGG:hsa:219409 UCSC:uc001urr.1 CTD:219409 GeneCards:GC13P028366
HGNC:HGNC:20374 HPA:HPA047096 neXtProt:NX_Q9H4S2
PharmGKB:PA162390373 eggNOG:NOG264927 HOGENOM:HOG000010106
HOVERGEN:HBG003555 InParanoid:Q9H4S2 KO:K09310 OMA:HNCKCSS
OrthoDB:EOG4GTKDV GenomeRNAi:219409 NextBio:90587 Bgee:Q9H4S2
CleanEx:HS_GSX1 Genevestigator:Q9H4S2 GermOnline:ENSG00000169840
Uniprot:Q9H4S2
Length = 264
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 57/131 (43%), Positives = 70/131 (53%)
Query: 94 SELSPLGVHPHPTSPSTDYTTPLTALKYPPPAAL-------SQHQSLLNNSGRTNFTNKQ 146
S +SP GV P + + T+ P P S +Q + RT FT+ Q
Sbjct: 100 SAVSP-GVAHGPAAAAAAAALYQTSYPLPDPRQFHCISVDSSSNQLPSSKRMRTAFTSTQ 158
Query: 147 LTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGS 206
L ELE+EF N YL+R RRIEIA+ L L+E QVKIWFQNRR+K KK K G G G
Sbjct: 159 LLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGSNHRGGGGGG 218
Query: 207 LMGAQGSSPNG 217
G GS+P G
Sbjct: 219 A-GGGGSAPQG 228
>ZFIN|ZDB-GENE-000823-3 [details] [associations]
symbol:hoxa3a "homeo box A3a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0048538 "thymus development" evidence=IMP] [GO:0060017
"parathyroid gland development" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-000823-3 GO:GO:0007275 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 EMBL:AL645756
EMBL:CR382300 EMBL:AF071245 EMBL:BC076469 EMBL:DQ060532
IPI:IPI00487095 RefSeq:NP_571609.1 UniGene:Dr.32618
ProteinModelPortal:Q8AWZ2 SMR:Q8AWZ2 STRING:Q8AWZ2
Ensembl:ENSDART00000052633 Ensembl:ENSDART00000146993 GeneID:58049
KEGG:dre:58049 CTD:58049 HOGENOM:HOG000252944 HOVERGEN:HBG107984
InParanoid:Q8AWZ2 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
NextBio:20892313 ArrayExpress:Q8AWZ2 Bgee:Q8AWZ2 InterPro:IPR025281
Pfam:PF13293 Uniprot:Q8AWZ2
Length = 410
Score = 210 (79.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 49/100 (49%), Positives = 61/100 (61%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+
Sbjct: 155 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQI 207
Query: 180 KIWFQNRRMKQKKRIKE-GILIGVGEGSLMGAQGSSPNGG 218
KIWFQNRRMK KK K G++ G S S GG
Sbjct: 208 KIWFQNRRMKYKKDQKGLGMMPSPGAQSPHSPVSLSSGGG 247
>RGD|1310780 [details] [associations]
symbol:Hoxb3 "homeo box B3" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0021546 "rhombomere development"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0060216 "definitive hemopoiesis"
evidence=IEA;ISO] [GO:0060324 "face development" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1310780 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
OrthoDB:EOG4S4PH1 GO:GO:0021546 EMBL:BC166859 IPI:IPI00194971
UniGene:Rn.208556 SMR:B2RYQ0 STRING:B2RYQ0
Ensembl:ENSRNOT00000011027 Genevestigator:B2RYQ0 Uniprot:B2RYQ0
Length = 428
Score = 210 (79.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+
Sbjct: 178 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQI 230
Query: 180 KIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
KIWFQNRRMK KK K +G+ G S G+
Sbjct: 231 KIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 262
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 152 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 205
>UNIPROTKB|F1MU40 [details] [associations]
symbol:MNX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:DAAA02012151 IPI:IPI00695827
Ensembl:ENSBTAT00000006046 OMA:NGASAHT Uniprot:F1MU40
Length = 192
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 50/98 (51%), Positives = 57/98 (58%)
Query: 124 PAALSQHQS-LLNNSGR--TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVK 180
PA SQ QS LL S R T FT KQL ELE +F NKYL+R +R E+A+ L L ETQVK
Sbjct: 15 PAHYSQAQSNLLGKSRRPRTAFTKKQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVK 74
Query: 181 IWFQNRRMKQKKRIKEGILIGVGEGSLMGAQGSSPNGG 218
IWFQNRRMK K+ K G G+ GG
Sbjct: 75 IWFQNRRMKWKRSKKAKEQAAQEAEKQKGGGGAGKGGG 112
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 39 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 92
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 184 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 237
>MGI|MGI:96178 [details] [associations]
symbol:Hoxa6 "homeobox A6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96178 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048704 HOVERGEN:HBG016849 CTD:3203
KO:K09306 eggNOG:NOG305812 OMA:PEQQYKS OrthoDB:EOG4C5CKB
EMBL:AF247663 EMBL:M11988 IPI:IPI00132603 PIR:A24779
RefSeq:NP_034584.1 UniGene:Mm.222030 ProteinModelPortal:P09092
SMR:P09092 STRING:P09092 PhosphoSite:P09092 PRIDE:P09092
Ensembl:ENSMUST00000062829 GeneID:15403 KEGG:mmu:15403
InParanoid:P09092 NextBio:288106 Bgee:P09092 CleanEx:MM_HOXA6
Genevestigator:P09092 GermOnline:ENSMUSG00000043219 Uniprot:P09092
Length = 232
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 47/96 (48%), Positives = 56/96 (58%)
Query: 104 HPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNS----GRTNFTNKQLTELEKEFHFNKY 159
H YT+P+ YP ++ + S GR +T Q ELEKEFHFN+Y
Sbjct: 123 HEEGTDRKYTSPV----YPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRY 178
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
LTR RRIEIA+ L L E Q+KIWFQNRRMK KK K
Sbjct: 179 LTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 214
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 88 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 141
>UNIPROTKB|E9PT77 [details] [associations]
symbol:LOC100360577 "Protein LOC100360577" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
Uniprot:E9PT77
Length = 285
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 184 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 237
>UNIPROTKB|P14651 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 EMBL:CH471109 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 OMA:ATYYDNT OrthoDB:EOG4S4PH1 CTD:3213 EMBL:X16667
EMBL:U59298 EMBL:AF287967 EMBL:AK291182 EMBL:AK315102 EMBL:X16175
IPI:IPI00027259 PIR:S07543 RefSeq:NP_002137.4 UniGene:Hs.654560
ProteinModelPortal:P14651 SMR:P14651 STRING:P14651 DMDM:215274007
PaxDb:P14651 PRIDE:P14651 DNASU:3213 Ensembl:ENST00000311626
Ensembl:ENST00000470495 Ensembl:ENST00000476342
Ensembl:ENST00000498678 GeneID:3213 KEGG:hsa:3213 UCSC:uc002inn.3
GeneCards:GC17M046626 HGNC:HGNC:5114 HPA:CAB009860 MIM:142966
neXtProt:NX_P14651 PharmGKB:PA29390 InParanoid:P14651
PhylomeDB:P14651 ChiTaRS:HOXB3 GenomeRNAi:3213 NextBio:12784
ArrayExpress:P14651 Bgee:P14651 CleanEx:HS_HOXB3
Genevestigator:P14651 GermOnline:ENSG00000120093 GO:GO:0021546
Uniprot:P14651
Length = 431
Score = 210 (79.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+
Sbjct: 180 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQI 232
Query: 180 KIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
KIWFQNRRMK KK K +G+ G S G+
Sbjct: 233 KIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 264
>MGI|MGI:96184 [details] [associations]
symbol:Hoxb3 "homeobox B3" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000979 "RNA polymerase
II core promoter sequence-specific DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0021546 "rhombomere development" evidence=IDA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
[GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IDA] [GO:0051216
"cartilage development" evidence=IGI] [GO:0060216 "definitive
hemopoiesis" evidence=IGI] [GO:0060324 "face development"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96184
GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:X66177 EMBL:S35628
EMBL:U02278 EMBL:M18168 IPI:IPI00315401 PIR:S20963
RefSeq:NP_001073338.1 RefSeq:NP_034588.2 UniGene:Mm.342481
ProteinModelPortal:P09026 SMR:P09026 STRING:P09026 PaxDb:P09026
PRIDE:P09026 Ensembl:ENSMUST00000055334 Ensembl:ENSMUST00000093944
GeneID:15410 KEGG:mmu:15410 InParanoid:P09026 NextBio:288128
Bgee:P09026 CleanEx:MM_HOXB3 Genevestigator:P09026
GermOnline:ENSMUSG00000048763 Uniprot:P09026
Length = 433
Score = 210 (79.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q+
Sbjct: 183 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQI 235
Query: 180 KIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
KIWFQNRRMK KK K +G+ G S G+
Sbjct: 236 KIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 267
>UNIPROTKB|F1PZZ7 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
NextBio:20856981 Uniprot:F1PZZ7
Length = 317
Score = 204 (76.9 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 216 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 269
>UNIPROTKB|G3MXN5 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
Uniprot:G3MXN5
Length = 319
Score = 204 (76.9 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 218 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 271
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 203
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 148 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 201
>UNIPROTKB|Q5YLH5 [details] [associations]
symbol:HOXA6 "Homeobox protein Hox-A6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG238660 HOVERGEN:HBG016849 EMBL:AY307380
IPI:IPI00598309 RefSeq:NP_001026158.1 RefSeq:XP_003640784.1
UniGene:Gga.22376 ProteinModelPortal:Q5YLH5 SMR:Q5YLH5
GeneID:100857163 GeneID:420630 KEGG:gga:100857163 KEGG:gga:420630
CTD:3203 KO:K09306 NextBio:20823516 Uniprot:Q5YLH5
Length = 231
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 40/58 (68%), Positives = 44/58 (75%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK K
Sbjct: 156 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 213
>UNIPROTKB|E2RGY0 [details] [associations]
symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
Length = 254
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 155 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 208
>UNIPROTKB|P09016 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
Uniprot:P09016
Length = 255
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 211
>UNIPROTKB|F1RSW3 [details] [associations]
symbol:GSX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663 "neuron
fate commitment" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021854
"hypothalamus development" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984 GO:GO:0048663
GO:GO:0021854 OMA:HNCKCSS GeneTree:ENSGT00700000104161
EMBL:CU633812 Ensembl:ENSSSCT00000010201 Uniprot:F1RSW3
Length = 265
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 57/133 (42%), Positives = 70/133 (52%)
Query: 94 SELSPLGVHPHPTSPSTDYTTPLTALKYPPPAAL-------SQHQSLLNNSGRTNFTNKQ 146
S +SP GV P + + T+ P P S +Q + RT FT+ Q
Sbjct: 98 SAVSP-GVAHGPAAAAAAAALYQTSYPLPDPRQFHCISVDSSSNQLPSSKRMRTAFTSTQ 156
Query: 147 LTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGILIGVGEGS 206
L ELE+EF N YL+R RRIEIA+ L L+E QVKIWFQNRR+K KK K G G G
Sbjct: 157 LLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGSNHRGGGSGG 216
Query: 207 --LMGAQGSSPNG 217
GA G +P G
Sbjct: 217 GGSAGAGGGAPQG 229
>MGI|MGI:96179 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0001953 "negative
regulation of cell-matrix adhesion" evidence=ISO] [GO:0002686
"negative regulation of leukocyte migration" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045617 "negative regulation of keratinocyte
differentiation" evidence=ISO] [GO:0045656 "negative regulation of
monocyte differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048863 "stem cell
differentiation" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96179
GO:GO:0005634 GO:GO:0009952 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0048863 GO:GO:0002686 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG016849 CTD:3204
KO:K09307 OrthoDB:EOG4W9J4Z OMA:EHKDEGP GO:GO:0045617 GO:GO:0045656
EMBL:M17192 EMBL:U15972 EMBL:AK033500 EMBL:BC131978 EMBL:BC132643
IPI:IPI00113735 PIR:A03314 PIR:A28329 RefSeq:NP_034585.1
UniGene:Mm.294826 ProteinModelPortal:P02830 SMR:P02830
IntAct:P02830 MINT:MINT-1172633 STRING:P02830 PRIDE:P02830
Ensembl:ENSMUST00000048715 GeneID:15404 KEGG:mmu:15404
UCSC:uc009byj.1 InParanoid:A2RS54 NextBio:288110 Bgee:P02830
CleanEx:MM_HOXA7 Genevestigator:P02830
GermOnline:ENSMUSG00000038236 Uniprot:P02830
Length = 229
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 40/59 (67%), Positives = 44/59 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K+
Sbjct: 132 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 190
>FB|FBgn0260642 [details] [associations]
symbol:Antp "Antennapedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007384
"specification of segmental identity, thorax" evidence=IMP]
[GO:0009948 "anterior/posterior axis specification" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0007379 "segment specification"
evidence=NAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007507 "heart development"
evidence=IEP] [GO:0007383 "specification of segmental identity,
antennal segment" evidence=IMP] [GO:0048542 "lymph gland
development" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] [GO:0042694 "muscle cell fate specification"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0007507 GO:GO:0042694 GO:GO:0043565
GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09311
GO:GO:0003705 GO:GO:0007494 GO:GO:0014019 EMBL:AE001572 EMBL:X03790
EMBL:X03791 EMBL:M20704 EMBL:M20705 EMBL:AY060407 EMBL:M14496
EMBL:K01948 EMBL:M12009 PIR:A23450 RefSeq:NP_996167.1
RefSeq:NP_996168.1 RefSeq:NP_996170.1 RefSeq:NP_996175.1
RefSeq:NP_996176.1 UniGene:Dm.3803 PDB:1AHD PDB:1HOM PDB:1SAN
PDB:2HOA PDB:9ANT PDBsum:1AHD PDBsum:1HOM PDBsum:1SAN PDBsum:2HOA
PDBsum:9ANT ProteinModelPortal:P02833 SMR:P02833 DIP:DIP-51405N
IntAct:P02833 MINT:MINT-763892 STRING:P02833 PRIDE:P02833
EnsemblMetazoa:FBtr0081647 EnsemblMetazoa:FBtr0081652
EnsemblMetazoa:FBtr0081654 EnsemblMetazoa:FBtr0081655 GeneID:40835
KEGG:dme:Dmel_CG1028 CTD:40835 FlyBase:FBgn0260642 eggNOG:NOG238660
HOGENOM:HOG000142851 InParanoid:P02833 OMA:FPPYDRM
OrthoDB:EOG43XSKG PhylomeDB:P02833 EvolutionaryTrace:P02833
GenomeRNAi:40835 NextBio:820851 Bgee:P02833 GermOnline:CG1028
GO:GO:0009948 GO:GO:0048542 GO:GO:0007383 GO:GO:0007384
Uniprot:P02833
Length = 378
Score = 207 (77.9 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 53/108 (49%), Positives = 61/108 (56%)
Query: 102 HP-HPTSPSTDYTTPLTALKYPP-PAALSQHQSLLNNS-GRTNFTNKQLTELEKEFHFNK 158
HP T PS + + + + P P SQ GR +T Q ELEKEFHFN+
Sbjct: 261 HPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNR 320
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EGILIGVGEG 205
YLTR RRIEIA L L E Q+KIWFQNRRMK KK K +G GEG
Sbjct: 321 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEG 368
>ZFIN|ZDB-GENE-990415-109 [details] [associations]
symbol:hoxb9a "homeo box B9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-109
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:BX927395 Ensembl:ENSDART00000006479 Bgee:H7BWW5 Uniprot:H7BWW5
Length = 253
Score = 178 (67.7 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 37/58 (63%), Positives = 41/58 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R +T Q ELEKEF FN YLTR RR E+A +L L E QVKIWFQNRRMK KK K+
Sbjct: 192 RCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKMNKD 249
Score = 38 (18.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 115 PLTALKYPPPAALSQHQSLLNNS 137
PL PP + QH+ +L +S
Sbjct: 118 PLLGHLGEPPKLVGQHEYILESS 140
>UNIPROTKB|F1SHT2 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
Length = 329
Score = 204 (76.9 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E QVKIWFQNRRMK KK
Sbjct: 226 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 279
>UNIPROTKB|E2QT43 [details] [associations]
symbol:HOXB5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045446
"endothelial cell differentiation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW CTD:3215
EMBL:AAEX03006516 RefSeq:XP_003435305.1 SMR:E2QT43
Ensembl:ENSCAFT00000026675 GeneID:100686000 KEGG:cfa:100686000
Uniprot:E2QT43
Length = 269
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 47/93 (50%), Positives = 54/93 (58%)
Query: 103 PHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG---RTNFTNKQLTELEKEFHFNKY 159
P P + ST T +P L + G RT +T Q ELEKEFHFN+Y
Sbjct: 159 PEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRY 218
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
LTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 219 LTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 251
>UNIPROTKB|P09067 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 GO:GO:0045446 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 KO:K09305 PIR:A24777 EMBL:AF287967 OMA:APQIFPW
OrthoDB:EOG45MN66 EMBL:M92299 EMBL:AK314964 EMBL:BC117247
EMBL:X03794 EMBL:K02572 EMBL:M86726 IPI:IPI00012514 PIR:A45578
RefSeq:NP_002138.1 UniGene:Hs.654456 ProteinModelPortal:P09067
SMR:P09067 IntAct:P09067 STRING:P09067 PhosphoSite:P09067
DMDM:400000 PRIDE:P09067 Ensembl:ENST00000239151 GeneID:3215
KEGG:hsa:3215 UCSC:uc002inr.3 CTD:3215 GeneCards:GC17M046668
HGNC:HGNC:5116 MIM:142960 neXtProt:NX_P09067 PharmGKB:PA29392
InParanoid:P09067 PhylomeDB:P09067 GenomeRNAi:3215 NextBio:12792
Bgee:P09067 CleanEx:HS_HOXB5 Genevestigator:P09067
GermOnline:ENSG00000120075 Uniprot:P09067
Length = 269
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 47/93 (50%), Positives = 54/93 (58%)
Query: 103 PHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG---RTNFTNKQLTELEKEFHFNKY 159
P P + ST T +P L + G RT +T Q ELEKEFHFN+Y
Sbjct: 159 PEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRY 218
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
LTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 219 LTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 251
>UNIPROTKB|F1RWG0 [details] [associations]
symbol:HOXB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045446
"endothelial cell differentiation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW EMBL:CU856160
RefSeq:XP_003131598.1 ProteinModelPortal:F1RWG0 SMR:F1RWG0
Ensembl:ENSSSCT00000019094 GeneID:100522700 KEGG:ssc:100522700
Uniprot:F1RWG0
Length = 269
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 47/93 (50%), Positives = 54/93 (58%)
Query: 103 PHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG---RTNFTNKQLTELEKEFHFNKY 159
P P + ST T +P L + G RT +T Q ELEKEFHFN+Y
Sbjct: 159 PEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRY 218
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
LTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 219 LTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 251
>MGI|MGI:96186 [details] [associations]
symbol:Hoxb5 "homeobox B5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045446 "endothelial cell differentiation"
evidence=IDA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048706 "embryonic skeletal system
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96186 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 KO:K09305 OMA:APQIFPW OrthoDB:EOG45MN66
CTD:3215 EMBL:M26283 EMBL:AK133512 EMBL:BC103595 EMBL:BC103596
EMBL:BC103604 EMBL:BC103607 EMBL:L36070 EMBL:X03033 IPI:IPI00132538
PIR:A43551 PIR:B24777 RefSeq:NP_032294.2 UniGene:Mm.207
ProteinModelPortal:P09079 SMR:P09079 STRING:P09079
PhosphoSite:P09079 PRIDE:P09079 Ensembl:ENSMUST00000049272
GeneID:15413 KEGG:mmu:15413 InParanoid:P09079 NextBio:288138
Bgee:P09079 CleanEx:MM_HOXB5 Genevestigator:P09079
GermOnline:ENSMUSG00000038700 Uniprot:P09079
Length = 269
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 47/93 (50%), Positives = 54/93 (58%)
Query: 103 PHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG---RTNFTNKQLTELEKEFHFNKY 159
P P + ST T +P L + G RT +T Q ELEKEFHFN+Y
Sbjct: 159 PEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRY 218
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
LTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 219 LTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 251
>RGD|1562292 [details] [associations]
symbol:Hoxb5 "homeo box B5" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045446 "endothelial cell
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic
skeletal system development" evidence=ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1562292
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048704 EMBL:CH473948 GO:GO:0045446
GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW
OrthoDB:EOG45MN66 CTD:3215 IPI:IPI00368860 RefSeq:NP_001178854.1
UniGene:Rn.229521 SMR:D3ZMA1 Ensembl:ENSRNOT00000010724
GeneID:497987 KEGG:rno:497987 UCSC:RGD:1562292 NextBio:698308
Uniprot:D3ZMA1
Length = 269
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 47/93 (50%), Positives = 54/93 (58%)
Query: 103 PHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG---RTNFTNKQLTELEKEFHFNKY 159
P P + ST T +P L + G RT +T Q ELEKEFHFN+Y
Sbjct: 159 PEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRY 218
Query: 160 LTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
LTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 219 LTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 251
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 46/96 (47%), Positives = 64/96 (66%)
Query: 107 SPSTDYTTPLTALKYPP--PAALSQHQSLL--NNSG------RTNFTNKQLTELEKEFHF 156
+P++ T+ +++ K P P H +++ N SG RT +T +Q+ ELEKEFH+
Sbjct: 113 TPTSQNTSTVSSRKDPVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHY 172
Query: 157 NKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK
Sbjct: 173 NRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKK 208
>UNIPROTKB|F1SHV7 [details] [associations]
symbol:MNX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060539 "diaphragm
development" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0021904 "dorsal/ventral neural tube
patterning" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0008045 GO:GO:0009791 GO:GO:0021675
GO:GO:0031018 GO:GO:0060539 GO:GO:0021904
GeneTree:ENSGT00660000095141 GO:GO:0021520 KO:K08025 OMA:YNSSDCS
EMBL:CU928638 RefSeq:XP_003134570.1 Ensembl:ENSSSCT00000017867
GeneID:100511165 KEGG:ssc:100511165 Uniprot:F1SHV7
Length = 404
Score = 188 (71.2 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 46/94 (48%), Positives = 55/94 (58%)
Query: 128 SQHQS-LLNNSGR--TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQ 184
SQ QS LL R T FT++QL ELE +F NKYL+R +R E+A+ L L ETQVKIWFQ
Sbjct: 234 SQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQ 293
Query: 185 NRRMKQKKRIKEGILIGVGEGSLMGAQGSSPNGG 218
NRRMK K+ K G G+ GG
Sbjct: 294 NRRMKWKRSKKAKEQAAQEAEKQKGGGGAGKGGG 327
Score = 39 (18.8 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 16/56 (28%), Positives = 20/56 (35%)
Query: 83 GEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG 138
G G SP P P +P+ L A PP L+ H +LL G
Sbjct: 45 GSGGAASGAASGSCSPASSEP-PAAPADR----LRAKSPSPPRLLAAHCALLPKPG 95
>UNIPROTKB|E2QT33 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026688 Uniprot:E2QT33
Length = 237
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 43/76 (56%), Positives = 49/76 (64%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKS- 198
Query: 198 ILIGVGEGSLMGAQGS 213
G G+ + GS
Sbjct: 199 ----TGPGATASSAGS 210
>UNIPROTKB|E2QT52 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
Length = 274
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 42/77 (54%), Positives = 51/77 (66%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 173 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 232
Query: 199 LIGVGEGSLMGAQGSSP 215
+ G G G P
Sbjct: 233 T-KIRSGGTAGTAGGPP 248
>UNIPROTKB|E2R0R6 [details] [associations]
symbol:BSX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060056 "mammary gland involution"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0060056 GeneTree:ENSGT00700000104097 CTD:390259 OMA:LHKPEHH
EMBL:AAEX03003408 RefSeq:XP_546472.2 ProteinModelPortal:E2R0R6
Ensembl:ENSCAFT00000018539 GeneID:489354 KEGG:cfa:489354
NextBio:20862533 Uniprot:E2R0R6
Length = 232
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 52/133 (39%), Positives = 71/133 (53%)
Query: 73 SSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTP--LTALKYPPPAALS-- 128
SSL P+ + G + P+ L+P HPH D+ P LT P PA
Sbjct: 43 SSLASRVPLL-DYGYPLMPTPTLLAP---HPHHPLHKGDHHHPYFLTTSGMPVPALFPHP 98
Query: 129 QHQSL-----LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWF 183
QH L RT F++ QL+ LEK F +YL+ R+E+A+ L L+ETQVK WF
Sbjct: 99 QHSELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWF 158
Query: 184 QNRRMKQKKRIKE 196
QNRRMK KK++++
Sbjct: 159 QNRRMKHKKQLRK 171
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 42/77 (54%), Positives = 51/77 (66%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 225
Query: 199 LIGVGEGSLMGAQGSSP 215
+ G G G P
Sbjct: 226 T-KIRSGGTAGTAGGPP 241
>UNIPROTKB|Q24645 [details] [associations]
symbol:Antp "Homeotic protein antennapedia" species:7241
"Drosophila subobscura" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007384 "specification of
segmental identity, thorax" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009948 GO:GO:0007384 EMBL:X60995 EMBL:X62246 PIR:S26492
ProteinModelPortal:Q24645 SMR:Q24645 FlyBase:FBgn0012932
Uniprot:Q24645
Length = 394
Score = 206 (77.6 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 54/116 (46%), Positives = 67/116 (57%)
Query: 92 IPSELSPLGVHPHPTSPSTDYTTPLTALKYP-PPAALSQHQSLLNNSGRTNFTNKQLTEL 150
+P + +P +P+ S S+ +PL YP + + Q GR +T Q EL
Sbjct: 277 LPGQHTPPSQNPN--SQSSGMPSPL----YPWMRSQFGKCQE--RKRGRQTYTRYQTLEL 328
Query: 151 EKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EGILIGVGEG 205
EKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K +G GEG
Sbjct: 329 EKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEG 384
>UNIPROTKB|P13378 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008595 "anterior/posterior axis specification,
embryo" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0048705 EMBL:AC009336
HOVERGEN:HBG016849 eggNOG:NOG314669 KO:K09308 CTD:3234
EMBL:AY014304 EMBL:AY014303 EMBL:AL520835 EMBL:BC038709
EMBL:BC090853 EMBL:X15507 IPI:IPI00008481 IPI:IPI00916034
IPI:IPI01018181 PIR:B32830 RefSeq:NP_001186675.1 RefSeq:NP_062458.1
UniGene:Hs.301963 ProteinModelPortal:P13378 SMR:P13378
MINT:MINT-7032137 STRING:P13378 PhosphoSite:P13378 DMDM:13124737
PRIDE:P13378 Ensembl:ENST00000313173 Ensembl:ENST00000429017
Ensembl:ENST00000450510 Ensembl:ENST00000544999 GeneID:3234
KEGG:hsa:3234 UCSC:uc002uko.3 GeneCards:GC02P176958 HGNC:HGNC:5139
MIM:142985 neXtProt:NX_P13378 PharmGKB:PA29413 InParanoid:P13378
OMA:GQEYFHP GenomeRNAi:3234 NextBio:12869 ArrayExpress:P13378
Bgee:P13378 CleanEx:HS_HOXD8 Genevestigator:P13378
GermOnline:ENSG00000175879 Uniprot:P13378
Length = 290
Score = 179 (68.1 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 36/55 (65%), Positives = 40/55 (72%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
GR ++ Q ELEKEF FN YLTR RRIE++ L L E QVKIWFQNRRMK KK
Sbjct: 200 GRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK 254
Score = 38 (18.4 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 102 HPHPTSPSTDYTTPLTALKYPPP 124
HP SP+ Y +PPP
Sbjct: 95 HPGGGSPAAAYQAAPPPPPHPPP 117
Score = 37 (18.1 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 102 HPHPTSP 108
HPHP+ P
Sbjct: 71 HPHPSPP 77
>ZFIN|ZDB-GENE-990415-120 [details] [associations]
symbol:hoxd3a "homeo box D3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-120
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
EMBL:BX322661 Ensembl:ENSDART00000082359 Bgee:G8JL23 Uniprot:G8JL23
Length = 403
Score = 206 (77.6 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 40/62 (64%), Positives = 50/62 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 172 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 231
Query: 198 IL 199
I+
Sbjct: 232 IM 233
>UNIPROTKB|F1RSV7 [details] [associations]
symbol:F1RSV7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104446
EMBL:CU861636 Ensembl:ENSSSCT00000010205 OMA:RMKWRER Uniprot:F1RSV7
Length = 283
Score = 173 (66.0 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 35/58 (60%), Positives = 42/58 (72%)
Query: 135 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
N RT +T QL ELEKEF FNKY++R RR+E+A +L L E +KIWF NRRMK KK
Sbjct: 147 NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWF-NRRMKWKK 203
Score = 44 (20.5 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 80 PVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYT---TPLT-ALKYPP 123
P G +G + P ++SP V P P+ + P AL +PP
Sbjct: 50 PFAGALGALEQGGPPDISPYEVPPLADDPAVAHLHHHLPAQLALPHPP 97
Score = 38 (18.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 99 LGVHPHPTSPSTDYTTPLTALKYPPPAALSQHQ 131
+G P P P + L AL+ P +S ++
Sbjct: 38 MGRQPPPPPPPPPFAGALGALEQGGPPDISPYE 70
>UNIPROTKB|E1BZG3 [details] [associations]
symbol:HOXD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007160
GO:GO:0010628 GeneTree:ENSGT00700000104189 KO:K09303
InterPro:IPR025281 Pfam:PF13293 CTD:3232 OMA:PECTMQK
EMBL:AADN02020018 IPI:IPI00588035 RefSeq:XP_428765.2
Ensembl:ENSGALT00000038692 GeneID:431212 KEGG:gga:431212
NextBio:20830712 Uniprot:E1BZG3
Length = 413
Score = 206 (77.6 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 40/62 (64%), Positives = 50/62 (80%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q+KIWFQNRRMK KK K +G
Sbjct: 182 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 241
Query: 198 IL 199
I+
Sbjct: 242 IM 243
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 42/67 (62%), Positives = 48/67 (71%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK ++K
Sbjct: 11 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 70
Query: 197 GILIGVG 203
L G
Sbjct: 71 MSLASAG 77
>UNIPROTKB|Q6B3N0 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOVERGEN:HBG016849 eggNOG:NOG236516 CTD:3202
KO:K09305 EMBL:AY686640 IPI:IPI00602185 RefSeq:XP_003640747.1
RefSeq:XP_003640753.1 RefSeq:XP_003640770.1 UniGene:Gga.11995
ProteinModelPortal:Q6B3N0 SMR:Q6B3N0 STRING:Q6B3N0 GeneID:100857257
GeneID:100858404 GeneID:100858834 KEGG:gga:100857257
KEGG:gga:100858404 KEGG:gga:100858834 Uniprot:Q6B3N0
Length = 270
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 48/92 (52%), Positives = 56/92 (60%)
Query: 106 TSPSTDYTT-PLTALKYPPPAALS-QHQSLLNNSG---RTNFTNKQLTELEKEFHFNKYL 160
++PS T P YP L H ++ G RT +T Q ELEKEFHFN+YL
Sbjct: 161 SAPSDQSTAQPSQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYL 220
Query: 161 TRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
TR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 221 TRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252
>UNIPROTKB|F1S9Q4 [details] [associations]
symbol:BSX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060056 "mammary gland involution" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0060056 GeneTree:ENSGT00700000104097 OMA:LHKPEHH
EMBL:CU570649 RefSeq:XP_003482678.1 Ensembl:ENSSSCT00000016505
GeneID:100738917 KEGG:ssc:100738917 Uniprot:F1S9Q4
Length = 232
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 52/133 (39%), Positives = 71/133 (53%)
Query: 73 SSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTP--LTALKYPPPAALS-- 128
SSL P+ + G + P+ L+P HPH D+ P LT P PA
Sbjct: 43 SSLASRVPLL-DYGYPLMPTPTLLAP---HPHHPLHKGDHHHPYFLTTSGVPVPALFPHP 98
Query: 129 QHQSL-----LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWF 183
QH L RT F++ QL+ LEK F +YL+ R+E+A+ L L+ETQVK WF
Sbjct: 99 QHTELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWF 158
Query: 184 QNRRMKQKKRIKE 196
QNRRMK KK++++
Sbjct: 159 QNRRMKHKKQLRK 171
>MGI|MGI:96177 [details] [associations]
symbol:Hoxa5 "homeobox A5" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0003016
"respiratory system process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0010870 "positive regulation
of receptor biosynthetic process" evidence=ISO] [GO:0016477 "cell
migration" evidence=IMP] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISO] [GO:0030324 "lung development"
evidence=IMP] [GO:0030878 "thyroid gland development" evidence=IMP]
[GO:0033599 "regulation of mammary gland epithelial cell
proliferation" evidence=IMP] [GO:0035264 "multicellular organism
growth" evidence=IMP] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=ISO] [GO:0045647 "negative regulation of
erythrocyte differentiation" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0048286 "lung alveolus development"
evidence=IMP] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IMP] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] [GO:0060435 "bronchiole development" evidence=IMP]
[GO:0060439 "trachea morphogenesis" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060480 "lung goblet cell differentiation"
evidence=IMP] [GO:0060481 "lobar bronchus epithelium development"
evidence=IMP] [GO:0060484 "lung-associated mesenchyme development"
evidence=IMP] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IMP] [GO:0060536 "cartilage morphogenesis" evidence=IMP]
[GO:0060574 "intestinal epithelial cell maturation" evidence=IMP]
[GO:0060638 "mesenchymal-epithelial cell signaling" evidence=IMP]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IMP] [GO:0060749 "mammary gland alveolus development"
evidence=IMP] [GO:0060764 "cell-cell signaling involved in mammary
gland development" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96177
GO:GO:0005634 GO:GO:0016477 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:M36604 EMBL:Y00208 EMBL:X16840 EMBL:M28021
EMBL:BC011063 IPI:IPI00132371 PIR:S07812 RefSeq:NP_034583.1
UniGene:Mm.173 ProteinModelPortal:P09021 SMR:P09021 IntAct:P09021
STRING:P09021 PhosphoSite:P09021 PaxDb:P09021 PRIDE:P09021
Ensembl:ENSMUST00000048794 GeneID:15402 KEGG:mmu:15402
UCSC:uc009byh.1 InParanoid:P09021 NextBio:288102 Bgee:P09021
CleanEx:MM_HOXA5 Genevestigator:P09021
GermOnline:ENSMUSG00000038253 Uniprot:P09021
Length = 270
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 51/114 (44%), Positives = 60/114 (52%)
Query: 83 GEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS-QHQSLLNNSG--- 138
G + P+ G P SP+ P YP L H ++ G
Sbjct: 144 GTASAAEEDAPASSEQAGAQSEP-SPAP----PAQPQIYPWMRKLHISHDNIGGPEGKRA 198
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 199 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252
>RGD|6492497 [details] [associations]
symbol:LOC100911546 "homeobox protein Hox-A5-like" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
KEGG:rno:79241 Uniprot:G3V6T2
Length = 270
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 51/114 (44%), Positives = 60/114 (52%)
Query: 83 GEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS-QHQSLLNNSG--- 138
G + P+ G P SP+ P YP L H ++ G
Sbjct: 144 GTASAAEEDAPASSEQAGAQSEP-SPAP----PAQPQIYPWMRKLHISHDNIGGPEGKRA 198
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 199 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252
>RGD|6502805 [details] [associations]
symbol:LOC100909641 "homeobox protein Hox-A5-like" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
KEGG:rno:79241 Uniprot:G3V6T2
Length = 270
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 51/114 (44%), Positives = 60/114 (52%)
Query: 83 GEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS-QHQSLLNNSG--- 138
G + P+ G P SP+ P YP L H ++ G
Sbjct: 144 GTASAAEEDAPASSEQAGAQSEP-SPAP----PAQPQIYPWMRKLHISHDNIGGPEGKRA 198
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 199 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252
>ZFIN|ZDB-GENE-990415-112 [details] [associations]
symbol:hoxc4a "homeo box C4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
Uniprot:Q9PWM3
Length = 268
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 53/115 (46%), Positives = 65/115 (56%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTP-----LTALKYPP--PAALSQHQSLLNNS-------- 137
P LSP P S + + TP + K P P H S +N+S
Sbjct: 99 PLPLSP--ATPSAASSACNQATPEHPNSSASAKQPVVYPWMKKIHVSTVNSSYNGAEPKR 156
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 157 SRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 211
>MGI|MGI:96209 [details] [associations]
symbol:Hoxd8 "homeobox D8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96209
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0048705
HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332 eggNOG:NOG314669
OrthoDB:EOG4H464V KO:K09308 EMBL:AL928644 CTD:3234 OMA:GQEYFHP
EMBL:X56561 EMBL:M87803 IPI:IPI00828631 PIR:A43562 PIR:S16177
RefSeq:NP_032302.2 UniGene:Mm.280673 ProteinModelPortal:P23463
STRING:P23463 PhosphoSite:P23463 PRIDE:P23463
Ensembl:ENSMUST00000019749 GeneID:15437 KEGG:mmu:15437
InParanoid:P23463 NextBio:288214 CleanEx:MM_HOXD8
Genevestigator:P23463 GermOnline:ENSMUSG00000027102 Uniprot:P23463
Length = 289
Score = 179 (68.1 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 36/55 (65%), Positives = 40/55 (72%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
GR ++ Q ELEKEF FN YLTR RRIE++ L L E QVKIWFQNRRMK KK
Sbjct: 198 GRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWKK 252
Score = 37 (18.1 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 102 HPHPTSP 108
HPHP+ P
Sbjct: 71 HPHPSPP 77
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 40/58 (68%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 10 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENK 67
>UNIPROTKB|F1MEU5 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:DAAA02012839 IPI:IPI00704983 RefSeq:XP_002687279.1
RefSeq:XP_869789.3 UniGene:Bt.105698 ProteinModelPortal:F1MEU5
Ensembl:ENSBTAT00000012174 GeneID:317660 KEGG:bta:317660
NextBio:20807136 Uniprot:F1MEU5
Length = 235
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 43/76 (56%), Positives = 50/76 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR ++ Q ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK
Sbjct: 144 GRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLT 203
Query: 197 GILIGVGEGSLMGAQG 212
L G G G+ + G
Sbjct: 204 STLSGGGGGAAADSLG 219
>UNIPROTKB|E2QSK8 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
"embryonic skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:AAEX03014973 RefSeq:XP_003433616.1
Ensembl:ENSCAFT00000010669 GeneID:486499 KEGG:cfa:486499
NextBio:20860262 Uniprot:E2QSK8
Length = 235
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 43/76 (56%), Positives = 50/76 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR ++ Q ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK
Sbjct: 144 GRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLT 203
Query: 197 GILIGVGEGSLMGAQG 212
L G G G+ + G
Sbjct: 204 STLSGGGGGAAADSLG 219
>UNIPROTKB|P09630 [details] [associations]
symbol:HOXC6 "Homeobox protein Hox-C6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0007275 "multicellular organismal
development" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003714 GO:GO:0009952 GO:GO:0043565
EMBL:CH471054 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306
UniGene:Hs.549040 eggNOG:NOG266030 OMA:MNSYFAN OrthoDB:EOG41NTMZ
EMBL:S82986 EMBL:M16938 EMBL:AK314829 EMBL:BC074844 EMBL:BC074845
IPI:IPI00015921 IPI:IPI00221294 PIR:B28030 RefSeq:NP_004494.1
RefSeq:NP_710160.1 ProteinModelPortal:P09630 SMR:P09630
STRING:P09630 PhosphoSite:P09630 DMDM:115502398 PRIDE:P09630
Ensembl:ENST00000243108 Ensembl:ENST00000394331 GeneID:3223
KEGG:hsa:3223 UCSC:uc001ses.3 CTD:3223 GeneCards:GC12P054384
HGNC:HGNC:5128 MIM:142972 neXtProt:NX_P09630 PharmGKB:PA29403
InParanoid:P09630 PhylomeDB:P09630 GenomeRNAi:3223 NextBio:12825
ArrayExpress:P09630 Bgee:P09630 CleanEx:HS_HOXC6
Genevestigator:P09630 GermOnline:ENSG00000197757 Uniprot:P09630
Length = 235
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 43/76 (56%), Positives = 50/76 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR ++ Q ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK
Sbjct: 144 GRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLT 203
Query: 197 GILIGVGEGSLMGAQG 212
L G G G+ + G
Sbjct: 204 STLSGGGGGATADSLG 219
>UNIPROTKB|I3L9Q6 [details] [associations]
symbol:HOXC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
EMBL:FP579005 RefSeq:XP_003355472.1 ProteinModelPortal:I3L9Q6
Ensembl:ENSSSCT00000032524 GeneID:100627932 KEGG:ssc:100627932
Uniprot:I3L9Q6
Length = 235
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 43/76 (56%), Positives = 50/76 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR ++ Q ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK
Sbjct: 144 GRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLT 203
Query: 197 GILIGVGEGSLMGAQG 212
L G G G+ + G
Sbjct: 204 STLSGGGGGAAADSLG 219
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFHFN YLTR RRIEIA L L E Q+KIWFQNRRMK KK ++
Sbjct: 46 GRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 103
>UNIPROTKB|P29552 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7159 "Aedes aegypti" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 EMBL:CH477608 EMBL:X67132
RefSeq:XP_001660313.1 ProteinModelPortal:P29552 SMR:P29552
EnsemblMetazoa:AAEL009742-RA GeneID:5572355
KEGG:aag:AaeL_AAEL009742 VectorBase:AAEL009742 eggNOG:NOG328968
InParanoid:P29552 OrthoDB:EOG4F7M1W PhylomeDB:P29552
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 Uniprot:P29552
Length = 239
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFHFN YLTR RRIEIA L L E Q+KIWFQNRRMK KK ++
Sbjct: 24 GRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 81
>MGI|MGI:95842 [details] [associations]
symbol:Gsx1 "GS homeobox 1" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IGI] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0021984 "adenohypophysis development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IMP] [GO:0048663 "neuron fate commitment"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:95842 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527
GO:GO:0021984 GO:GO:0048663 GO:GO:0021854 CTD:219409
eggNOG:NOG264927 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
OMA:HNCKCSS OrthoDB:EOG4GTKDV EMBL:U21224 IPI:IPI00133256
PIR:S63604 RefSeq:NP_032204.1 UniGene:Mm.4797
ProteinModelPortal:P31315 SMR:P31315 STRING:P31315 PRIDE:P31315
Ensembl:ENSMUST00000065382 GeneID:14842 KEGG:mmu:14842
GeneTree:ENSGT00700000104161 InParanoid:P31315 NextBio:287067
Bgee:P31315 CleanEx:MM_GSX1 Genevestigator:P31315
GermOnline:ENSMUSG00000053129 Uniprot:P31315
Length = 261
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 46/79 (58%), Positives = 54/79 (68%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT FT+ QL ELE+EF N YL+R RRIEIA+ L L+E QVKIWFQNRR+K KK K
Sbjct: 150 RTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGSN 209
Query: 199 LIGVGEGSLMGAQGSSPNG 217
G G G+ GA G +P G
Sbjct: 210 HRG-GAGA--GAGGGAPQG 225
>MGI|MGI:96197 [details] [associations]
symbol:Hoxc6 "homeobox C6" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96197
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG266030
OMA:MNSYFAN OrthoDB:EOG41NTMZ CTD:3223 EMBL:J03074 EMBL:M35986
EMBL:X16511 EMBL:X16510 EMBL:S74185 EMBL:X12504 EMBL:X16838
IPI:IPI00310548 IPI:IPI00387269 PIR:A32167 PIR:A56568 PIR:S00987
RefSeq:NP_034595.2 UniGene:Mm.4444 ProteinModelPortal:P10629
SMR:P10629 STRING:P10629 PhosphoSite:P10629 PRIDE:P10629
Ensembl:ENSMUST00000001711 GeneID:15425 KEGG:mmu:15425
InParanoid:P10629 ChiTaRS:HOXC6 NextBio:288174 Bgee:P10629
CleanEx:MM_HOXC6 Genevestigator:P10629
GermOnline:ENSMUSG00000001661 Uniprot:P10629
Length = 235
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 43/76 (56%), Positives = 50/76 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR ++ Q ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK
Sbjct: 144 GRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLT 203
Query: 197 GILIGVGEGSLMGAQG 212
L G G G+ + G
Sbjct: 204 STLSGGGGGATADSLG 219
>RGD|620609 [details] [associations]
symbol:Hoxa5 "homeo box A5" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 51/114 (44%), Positives = 60/114 (52%)
Query: 83 GEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS-QHQSLLNNSG--- 138
G + P+ G P SP+ P YP L H ++ G
Sbjct: 123 GTASAAEEDAPASSEQAGAQSEP-SPAP----PAQPQIYPWMRKLHISHDNIGGPEGKRA 177
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 178 RTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 231
>UNIPROTKB|G3V634 [details] [associations]
symbol:Gsx1 "Protein Gsx1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1310020 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH474012 CTD:219409 KO:K09310 OMA:HNCKCSS
GeneTree:ENSGT00700000104161 RefSeq:NP_001178592.1
UniGene:Rn.228201 Ensembl:ENSRNOT00000001260 GeneID:288457
KEGG:rno:288457 NextBio:628114 Uniprot:G3V634
Length = 261
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 46/79 (58%), Positives = 54/79 (68%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT FT+ QL ELE+EF N YL+R RRIEIA+ L L+E QVKIWFQNRR+K KK K
Sbjct: 150 RTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGSN 209
Query: 199 LIGVGEGSLMGAQGSSPNG 217
G G G+ GA G +P G
Sbjct: 210 HRG-GAGA--GAGGGAPQG 225
>UNIPROTKB|G3V841 [details] [associations]
symbol:Hoxc6 "Homeo box C6" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:CH474035 KO:K09306 OMA:MNSYFAN
CTD:3223 EMBL:AC116663 RefSeq:XP_001069410.2 RefSeq:XP_003750463.1
ProteinModelPortal:G3V841 SMR:G3V841 PRIDE:G3V841
Ensembl:ENSRNOT00000022217 GeneID:252885 KEGG:rno:252885
Uniprot:G3V841
Length = 235
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 43/76 (56%), Positives = 50/76 (65%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-E 196
GR ++ Q ELEKEFHFN+YLTR RRIEIA+ L L E Q+KIWFQNRRMK KK
Sbjct: 144 GRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLT 203
Query: 197 GILIGVGEGSLMGAQG 212
L G G G+ + G
Sbjct: 204 STLSGGGGGATADSLG 219
>UNIPROTKB|P52949 [details] [associations]
symbol:Hoxa5 "Homeobox protein Hox-A5" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:620609 GO:GO:0005634
GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286
GO:GO:0035264 GO:GO:0003016 GO:GO:0016525 GO:GO:0060749
GO:GO:0060644 GO:GO:0048704 GO:GO:0007389 GO:GO:0033599
GO:GO:0060441 GO:GO:0060484 GO:GO:0030878 GO:GO:0010870
GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 OrthoDB:EOG49S677
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:L03556 IPI:IPI00211208 PIR:I65197
UniGene:Rn.8465 ProteinModelPortal:P52949 SMR:P52949 STRING:P52949
PRIDE:P52949 InParanoid:P52949 Genevestigator:P52949
GermOnline:ENSRNOG00000006466 Uniprot:P52949
Length = 233
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 51/114 (44%), Positives = 60/114 (52%)
Query: 83 GEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPPAALS-QHQSLLNNSG--- 138
G + P+ G P SP+ P YP L H ++ G
Sbjct: 123 GTASAAEEDAPASSEQAGAQSEP-SPAP----PAQPQIYPWMRKLHISHDNIGGPEGKRA 177
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 178 RTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 231
>ZFIN|ZDB-GENE-000823-4 [details] [associations]
symbol:hoxa4a "homeo box A4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-4 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:CR382300 EMBL:AF071246 EMBL:BC122457 EMBL:DQ060533 EMBL:M76382
EMBL:Y13947 IPI:IPI00487552 PIR:S34415 RefSeq:NP_571610.1
UniGene:Dr.159437 ProteinModelPortal:Q9PWL5 SMR:Q9PWL5
Ensembl:ENSDART00000080466 GeneID:58050 KEGG:dre:58050 CTD:58050
eggNOG:NOG317510 HOGENOM:HOG000231179 HOVERGEN:HBG016849
InParanoid:Q9PWL5 OMA:PGDYYER OrthoDB:EOG4S1T87 NextBio:20892314
Bgee:Q9PWL5 Uniprot:Q9PWL5
Length = 245
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 38/54 (70%), Positives = 44/54 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q ELEKEFHFN+YLTR RR+EIA + L+E QVKIWFQNRRMK KK
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKK 204
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 199 (75.1 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFHFN YLTR RRIEIA L L E Q+KIWFQNRRMK KK ++
Sbjct: 141 GRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELR 198
>UNIPROTKB|F1NMG1 [details] [associations]
symbol:F1NMG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00598309 OMA:PEQQYKS
GeneTree:ENSGT00700000104332 EMBL:AADN02000982 EMBL:AADN02000983
EMBL:AADN02071374 Ensembl:ENSGALT00000018011 Uniprot:F1NMG1
Length = 228
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 157 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 210
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 70 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 127
>UNIPROTKB|F1N1K1 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 IPI:IPI00699636
UniGene:Bt.91790 OMA:WMRSSGT EMBL:DAAA02049062
Ensembl:ENSBTAT00000007292 Uniprot:F1N1K1
Length = 217
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 197
>UNIPROTKB|Q9TT89 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 eggNOG:NOG238660 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AF200721 IPI:IPI00699636 RefSeq:NP_776767.1
UniGene:Bt.91790 ProteinModelPortal:Q9TT89 SMR:Q9TT89 PRIDE:Q9TT89
GeneID:281820 KEGG:bta:281820 CTD:3217 InParanoid:Q9TT89
NextBio:20805731 Uniprot:Q9TT89
Length = 217
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 197
>UNIPROTKB|F6UVS6 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
KO:K09307 CTD:3217 OMA:WMRSSGT Ensembl:ENSCAFT00000026688
EMBL:AAEX03006516 RefSeq:XP_851221.1 GeneID:608962 KEGG:cfa:608962
Uniprot:F6UVS6
Length = 217
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 197
>UNIPROTKB|P09629 [details] [associations]
symbol:HOXB7 "Homeobox protein Hox-B7" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 EMBL:CH471109 GO:GO:0090190 GO:GO:0048704
eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849 KO:K09307
OrthoDB:EOG4W9J4Z EMBL:AC103702 CTD:3217 EMBL:M16937 EMBL:AK290653
EMBL:AK223249 EMBL:BC015345 EMBL:S49765 EMBL:M30598 IPI:IPI00297418
PIR:A28030 RefSeq:NP_004493.3 UniGene:Hs.436181
ProteinModelPortal:P09629 SMR:P09629 IntAct:P09629 STRING:P09629
PhosphoSite:P09629 DMDM:311033482 PRIDE:P09629 DNASU:3217
Ensembl:ENST00000239165 GeneID:3217 KEGG:hsa:3217 UCSC:uc002inv.3
GeneCards:GC17M046684 HGNC:HGNC:5118 HPA:HPA049940 MIM:142962
neXtProt:NX_P09629 InParanoid:P09629 OMA:WMRSSGT PhylomeDB:P09629
GenomeRNAi:3217 NextBio:12800 ArrayExpress:P09629 Bgee:P09629
CleanEx:HS_HOXB7 Genevestigator:P09629 GermOnline:ENSG00000120087
Uniprot:P09629
Length = 217
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENK 197
>UNIPROTKB|P20719 [details] [associations]
symbol:HOXA5 "Homeobox protein Hox-A5" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003016 "respiratory system process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0048286 "lung
alveolus development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0060480 "lung
goblet cell differentiation" evidence=IEA] [GO:0060484
"lung-associated mesenchyme development" evidence=IEA] [GO:0060535
"trachea cartilage morphogenesis" evidence=IEA] [GO:0060574
"intestinal epithelial cell maturation" evidence=IEA] [GO:0060638
"mesenchymal-epithelial cell signaling" evidence=IEA] [GO:0060644
"mammary gland epithelial cell differentiation" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060764 "cell-cell signaling involved in mammary gland
development" evidence=IEA] [GO:0016525 "negative regulation of
angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IDA] [GO:0010870 "positive regulation
of receptor biosynthetic process" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0045639 "positive regulation of myeloid
cell differentiation" evidence=IDA] [GO:0045647 "negative
regulation of erythrocyte differentiation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0003677 EMBL:CH471073 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 EMBL:CH236948
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 EMBL:AC004080 GO:GO:0045639 GO:GO:0045647
GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:M26679 EMBL:BT009744 EMBL:CR542256 EMBL:BC013682
IPI:IPI00302291 PIR:A24777 PIR:A32799 RefSeq:NP_061975.2
UniGene:Hs.655218 ProteinModelPortal:P20719 SMR:P20719
STRING:P20719 PhosphoSite:P20719 DMDM:52788238 PRIDE:P20719
DNASU:3202 Ensembl:ENST00000222726 GeneID:3202 KEGG:hsa:3202
UCSC:uc003syn.2 GeneCards:GC07M027180 H-InvDB:HIX0201165
HGNC:HGNC:5106 HPA:CAB032627 HPA:HPA029319 MIM:142952
neXtProt:NX_P20719 PharmGKB:PA29383 InParanoid:P20719
PhylomeDB:P20719 GenomeRNAi:3202 NextBio:12740 Bgee:P20719
CleanEx:HS_HOXA5 Genevestigator:P20719 GermOnline:ENSG00000106004
Uniprot:P20719
Length = 270
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 199 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 252
>UNIPROTKB|F1RWG2 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 GO:GO:0030099 KO:K09307 OMA:WMRSSGT
EMBL:CU856160 RefSeq:XP_003131597.1 UniGene:Ssc.22336
Ensembl:ENSSSCT00000019092 GeneID:100522513 KEGG:ssc:100522513
Uniprot:F1RWG2
Length = 217
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 197
>MGI|MGI:96188 [details] [associations]
symbol:Hoxb7 "homeobox B7" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030099 "myeloid cell differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96188 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090 GO:GO:0090190
GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT EMBL:Y00436
EMBL:X06762 EMBL:AK136706 EMBL:AL645478 EMBL:M18167 EMBL:M18400
EMBL:X14570 IPI:IPI00132379 PIR:A26846 RefSeq:NP_034590.2
UniGene:Mm.390366 ProteinModelPortal:P09024 SMR:P09024
IntAct:P09024 MINT:MINT-1172508 STRING:P09024 PhosphoSite:P09024
PRIDE:P09024 DNASU:15415 Ensembl:ENSMUST00000049352 GeneID:15415
KEGG:mmu:15415 UCSC:uc007lbr.1 InParanoid:A2A9Z9 NextBio:288146
Bgee:P09024 CleanEx:MM_HOXB7 Genevestigator:P09024
GermOnline:ENSMUSG00000038721 Uniprot:P09024
Length = 217
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENK 197
>RGD|1559918 [details] [associations]
symbol:Hoxb7 "homeo box B7" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030099 "myeloid cell
differentiation" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1559918 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
GO:GO:0090190 GO:GO:0048704 eggNOG:NOG238660 GO:GO:0030099
HOVERGEN:HBG016849 KO:K09307 OrthoDB:EOG4W9J4Z CTD:3217 OMA:WMRSSGT
EMBL:BC079340 EMBL:M37566 IPI:IPI00195529 PIR:T10775
RefSeq:NP_001017480.1 UniGene:Rn.113631 ProteinModelPortal:P18864
SMR:P18864 PhosphoSite:P18864 Ensembl:ENSRNOT00000031035
GeneID:497985 KEGG:rno:497985 UCSC:RGD:1559918 InParanoid:P18864
NextBio:698299 Genevestigator:P18864 GermOnline:ENSRNOG00000007611
Uniprot:P18864
Length = 219
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFH+N+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 140 GRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 197
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/58 (67%), Positives = 44/58 (75%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
RT +T Q+ ELEKEFH +KYLTR RRIE+A L L E QVKIWFQNRRMK KK K+
Sbjct: 169 RTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKENKD 226
>ZFIN|ZDB-GENE-980526-70 [details] [associations]
symbol:hoxb5a "homeo box B5a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-70 GO:GO:0005634
GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849
eggNOG:NOG236516 HOGENOM:HOG000231178 KO:K09305 EMBL:AL645782
EMBL:X12802 EMBL:X68248 EMBL:BC071493 EMBL:DQ060540 EMBL:X07381
IPI:IPI00493376 PIR:S03671 RefSeq:NP_571176.2 UniGene:Dr.35792
ProteinModelPortal:P09014 SMR:P09014 Ensembl:ENSDART00000025449
GeneID:30317 KEGG:dre:30317 CTD:30317 InParanoid:P09014 OMA:APQIFPW
OrthoDB:EOG45MN66 NextBio:20806756 Bgee:P09014 Uniprot:P09014
Length = 275
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q ELEKEFHFN+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 204 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 257
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 209 (78.6 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E QVK+WFQNRRMK K++
Sbjct: 202 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 256
>UNIPROTKB|F1MY80 [details] [associations]
symbol:LOC100847795 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0001501 GO:GO:0050905 GO:GO:0009954
GO:GO:0019907 GeneTree:ENSGT00700000104054 OMA:CGVMRGC
GO:GO:0021520 EMBL:DAAA02012841 EMBL:DAAA02012842 EMBL:DAAA02012843
IPI:IPI00705105 Ensembl:ENSBTAT00000004243 Uniprot:F1MY80
Length = 294
Score = 176 (67.0 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R +T Q ELEKEF FN YLTR RR+EI+ + L + QVKIWFQNRRMK KK +E
Sbjct: 224 RCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNRE 281
Score = 39 (18.8 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTP-LTALKYPPPAA 126
P + S LG H P PS +P +AL PP A
Sbjct: 84 PLQESCLGEHEVPV-PSYYRASPSYSALDKPPHCA 117
>UNIPROTKB|F6RKN3 [details] [associations]
symbol:HOXA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:DAAA02010938 EMBL:DAAA02010937
IPI:IPI00867074 Ensembl:ENSBTAT00000056468 Uniprot:F6RKN3
Length = 284
Score = 172 (65.6 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R +T Q ELEKEF FN YLTR RR+EI+ + L + QVKIWFQNRRMK KK +E
Sbjct: 214 RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRE 271
Score = 42 (19.8 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 93 PSELSPLGVHPHPT--SPSTDYTTPLTALKYPPPAALS 128
P++ G P P S S D AL PPP L+
Sbjct: 114 PAQPPGRGFDPPPALASSSVDAARKERALDSPPPPTLA 151
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK
Sbjct: 14 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKK 67
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T +Q+ ELEKEFH+N+YLTR RR+EIA L L+E Q+KIWFQNRRMK KK
Sbjct: 154 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKK 207
>UNIPROTKB|Q6RFL5 [details] [associations]
symbol:BSX "Brain-specific homeobox protein homolog"
species:9031 "Gallus gallus" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007420 "brain development"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060056 "mammary gland
involution" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0007420 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104097 HOGENOM:HOG000231924 EMBL:AY500594
IPI:IPI00581246 RefSeq:NP_989843.1 UniGene:Gga.9478
ProteinModelPortal:Q6RFL5 SMR:Q6RFL5 Ensembl:ENSGALT00000010527
GeneID:395183 KEGG:gga:395183 CTD:390259 eggNOG:NOG242366
HOVERGEN:HBG050738 InParanoid:Q6RFL5 OMA:LHKPEHH OrthoDB:EOG4KKZ41
NextBio:20815273 Uniprot:Q6RFL5
Length = 233
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 50/134 (37%), Positives = 70/134 (52%)
Query: 74 SLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPT--SPSTDYTTP--LTALKYPPPAALSQ 129
SL P+ + G + P+ L+P HPHP P + P LT P PA
Sbjct: 44 SLASRVPLL-DYGYPLMPAPALLAP---HPHPALHKPEHHHHHPYFLTTSGVPVPALFPH 99
Query: 130 H-------QSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIW 182
H + RT F++ QL+ LEK F +YL+ R+E+A+ L L+ETQVK W
Sbjct: 100 HAHAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTW 159
Query: 183 FQNRRMKQKKRIKE 196
FQNRRMK KK++++
Sbjct: 160 FQNRRMKHKKQLRK 173
>UNIPROTKB|E1BAF5 [details] [associations]
symbol:BSX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060056 "mammary gland involution" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042755 "eating
behavior" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0060056 GeneTree:ENSGT00700000104097 CTD:390259 OMA:LHKPEHH
EMBL:DAAA02040563 IPI:IPI00701228 RefSeq:NP_001179998.1
UniGene:Bt.106481 Ensembl:ENSBTAT00000018597 GeneID:615347
KEGG:bta:615347 NextBio:20899575 Uniprot:E1BAF5
Length = 232
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 51/133 (38%), Positives = 71/133 (53%)
Query: 73 SSLRDLFPVKGEIGVTKVQIPSELSPLGVHPHPTSPSTDYTTP--LTALKYPPPAALS-- 128
S+L P+ + G + P+ L+P HPH D+ P LT P PA
Sbjct: 43 STLASRVPLL-DYGYPLMPTPTLLAP---HPHHPLHKGDHHHPYFLTTSGVPVPALFPHP 98
Query: 129 QHQSL-----LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWF 183
QH L RT F++ QL+ LEK F +YL+ R+E+A+ L L+ETQVK WF
Sbjct: 99 QHPELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWF 158
Query: 184 QNRRMKQKKRIKE 196
QNRRMK KK++++
Sbjct: 159 QNRRMKHKKQLRK 171
>ZFIN|ZDB-GENE-000823-7 [details] [associations]
symbol:hoxb6b "homeo box B6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-7 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
HOVERGEN:HBG016849 eggNOG:NOG305812 EMBL:AL645798 OrthoDB:EOG4G7C0G
EMBL:AF071254 EMBL:DQ060548 EMBL:Y14532 IPI:IPI00481961
UniGene:Dr.59927 ProteinModelPortal:Q9YGT4 SMR:Q9YGT4 STRING:Q9YGT4
InParanoid:Q9YGT4 ArrayExpress:Q9YGT4 Uniprot:Q9YGT4
Length = 224
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 39/58 (67%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR +T Q ELEKEFHFN+YLTR RRIEI+ L L E Q+KIWFQNRRMK KK K
Sbjct: 150 GRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWFQNRRMKWKKENK 207
>UNIPROTKB|E1BAV6 [details] [associations]
symbol:LOC519648 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ
EMBL:DAAA02072594 EMBL:DAAA02072595 IPI:IPI00696146
Ensembl:ENSBTAT00000002260 Uniprot:E1BAV6
Length = 285
Score = 172 (65.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 40/82 (48%), Positives = 51/82 (62%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R +T+ Q ELEKEFH N+Y+T R+ E+A L L+E QVKIWFQNRR K++K IK+ I
Sbjct: 178 RVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKI 237
Query: 199 L-IGVGEGSLMGAQGSSPNGGL 219
GS+ GS G L
Sbjct: 238 SQFENSGGSVQSDSGSISPGEL 259
Score = 41 (19.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 101 VHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTN 141
V+P P+S T T P+ + P A S S L +G N
Sbjct: 85 VYPGPSS--TMGTVPMNDMSSSPAAFSSLEYSNLGPAGGGN 123
>FB|FBgn0003339 [details] [associations]
symbol:Scr "Sex combs reduced" species:7227 "Drosophila
melanogaster" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007494 "midgut development" evidence=TAS]
[GO:0007379 "segment specification" evidence=NAS] [GO:0007381
"specification of segmental identity, labial segment" evidence=TAS]
[GO:0045498 "sex comb development" evidence=IMP;NAS] [GO:0007548
"sex differentiation" evidence=TAS] [GO:0007432 "salivary gland
boundary specification" evidence=NAS;TAS] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0042803 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 KO:K09311 GO:GO:0007494 EMBL:AE001572
GO:GO:0007548 GO:GO:0000977 GO:GO:0045498 GO:GO:0007432 PDB:2R5Y
PDB:2R5Z PDBsum:2R5Y PDBsum:2R5Z GO:GO:0007381 eggNOG:NOG236516
ChiTaRS:scrib EMBL:X14475 EMBL:X77075 EMBL:X77076 EMBL:U10506
EMBL:X05228 PIR:S03631 RefSeq:NP_524248.2 RefSeq:NP_996165.1
ProteinModelPortal:P09077 SMR:P09077 DIP:DIP-40017N IntAct:P09077
STRING:P09077 EnsemblMetazoa:FBtr0081657 EnsemblMetazoa:FBtr0081658
GeneID:40833 KEGG:dme:Dmel_CG1030 CTD:109559 FlyBase:FBgn0003339
InParanoid:P09077 OMA:ISCKYAN OrthoDB:EOG4H44KH PhylomeDB:P09077
EvolutionaryTrace:P09077 GenomeRNAi:40833 NextBio:820837
Bgee:P09077 GermOnline:CG1030 Uniprot:P09077
Length = 417
Score = 202 (76.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 40/57 (70%), Positives = 44/57 (77%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 328 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 384
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 38/59 (64%), Positives = 43/59 (72%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR R +EIA L L E Q+KIWFQNRRMK KK K+
Sbjct: 8 GRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKD 66
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 38/59 (64%), Positives = 43/59 (72%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
GR +T Q ELEKEFHFN+YLTR R +EIA L L E Q+KIWFQNRRMK KK K+
Sbjct: 8 GRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKD 66
>ZFIN|ZDB-GENE-980526-532 [details] [associations]
symbol:hoxc3a "homeo box C3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-532
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 HOGENOM:HOG000252944 EMBL:BX005254
EMBL:BC095299 EMBL:BC165158 IPI:IPI00931602 UniGene:Dr.132202
UniGene:Dr.510 SMR:Q503K0 Ensembl:ENSDART00000082472
HOVERGEN:HBG096057 InParanoid:Q503K0 Uniprot:Q503K0
Length = 254
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 41/77 (53%), Positives = 53/77 (68%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
KY A+ ++ S + R FT+ QL ELEKEFHF+ YL R RR+E+A +L+L + Q+
Sbjct: 136 KYSNGEAVVRNSS--SKRARVAFTSSQLLELEKEFHFSAYLCRNRRLEMAELLKLTDRQI 193
Query: 180 KIWFQNRRMKQKKRIKE 196
KIWFQNRRMK KK KE
Sbjct: 194 KIWFQNRRMKYKKDHKE 210
>UNIPROTKB|F1PS13 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ
EMBL:AAEX03026515 Ensembl:ENSCAFT00000027221 Uniprot:F1PS13
Length = 284
Score = 172 (65.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R +T+ Q ELEKEFH N+Y+T R+ E+A L L+E QVKIWFQNRR K++K IK+ I
Sbjct: 177 RVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERKTIKKKI 236
Query: 199 LIGVGEGSLMGAQGSSPNGG 218
GS + + S + G
Sbjct: 237 SQFENSGSSVQSDSGSISPG 256
Score = 40 (19.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 101 VHPHPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG 138
V+P P+S T T P+ + P A SQ S L +G
Sbjct: 85 VYPGPSS--TVGTVPMNDMISNPSAFGSQEYSNLGPAG 120
>FB|FBgn0004054 [details] [associations]
symbol:zen2 "zerknullt-related" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007450
"dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE014297 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 EMBL:AE001572
eggNOG:NOG325574 ChiTaRS:br GeneTree:ENSGT00700000104161
EMBL:X68348 PIR:B43697 RefSeq:NP_476794.1 UniGene:Dm.27226
ProteinModelPortal:P09090 SMR:P09090 EnsemblMetazoa:FBtr0081671
GeneID:40827 KEGG:dme:Dmel_CG1048 CTD:40827 FlyBase:FBgn0004054
InParanoid:P09090 OMA:CWDSNSS OrthoDB:EOG4KD53G PhylomeDB:P09090
GenomeRNAi:40827 NextBio:820795 Bgee:P09090 GermOnline:CG1048
Uniprot:P09090
Length = 252
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 46/91 (50%), Positives = 55/91 (60%)
Query: 124 PAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWF 183
P A ++ S RT F++ QL ELE+EFH NKYL R RRIEI+ L L E QVKIWF
Sbjct: 33 PTATTRSSEKSKRS-RTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWF 91
Query: 184 QNRRMKQKKRIKEGILIGVGEGSL-MGAQGS 213
QNRRMK KK IG S+ + +Q S
Sbjct: 92 QNRRMKLKKSTNRKGAIGALTTSIPLSSQSS 122
>ZFIN|ZDB-GENE-990415-113 [details] [associations]
symbol:hoxc6a "homeo box C6a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-113
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
HOVERGEN:HBG016849 KO:K09306 EMBL:AF071265 EMBL:BC083307
EMBL:DQ060554 EMBL:X17266 EMBL:Y14546 IPI:IPI00494357 PIR:S08639
RefSeq:NP_571198.1 UniGene:Dr.132203 ProteinModelPortal:P15862
SMR:P15862 Ensembl:ENSDART00000103136 GeneID:30346 KEGG:dre:30346
CTD:30346 eggNOG:NOG266030 InParanoid:P15862 OMA:MNSYFAN
OrthoDB:EOG41NTMZ NextBio:20806776 ArrayExpress:P15862 Bgee:P15862
Uniprot:P15862
Length = 231
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 42/76 (55%), Positives = 50/76 (65%)
Query: 121 YPPPAALSQHQSLLNNS----GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 176
YP ++ H + S GR ++ Q ELEKEFHFN+YLTR RRIEIA+ L L E
Sbjct: 124 YPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTE 183
Query: 177 TQVKIWFQNRRMKQKK 192
Q+KIWFQNRRMK KK
Sbjct: 184 RQIKIWFQNRRMKWKK 199
>UNIPROTKB|F1NF97 [details] [associations]
symbol:GBX2 "Homeobox protein GBX-2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
morphogenesis" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021930 "cerebellar granule cell precursor
proliferation" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0048483 "autonomic nervous system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 IPI:IPI00603632
EMBL:AADN02057578 Ensembl:ENSGALT00000021775 OMA:PREEDCG
Uniprot:F1NF97
Length = 180
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 47/99 (47%), Positives = 60/99 (60%)
Query: 103 PHPTSPSTDYTTPLTALKYPPPAALSQHQSLL----NNSGRTNFTNKQLTELEKEFHFNK 158
P P +P + TAL+ PP+A + + N RT FT++QL ELEKEFH K
Sbjct: 45 PAPAAPREEDCG--TALEENPPSAANAAANAAATGKNRRRRTAFTSEQLLELEKEFHCKK 102
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+ R +IA L+L+E QVKIWFQNRR K K R+K G
Sbjct: 103 YLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK-RVKAG 140
>UNIPROTKB|F1RWG6 [details] [associations]
symbol:HOXB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060324 "face
development" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0021615
"glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0021546
"rhombomere development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 InterPro:IPR025281
Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT GO:GO:0021546 EMBL:CU856160
Ensembl:ENSSSCT00000019088 Uniprot:F1RWG6
Length = 431
Score = 200 (75.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 46/92 (50%), Positives = 59/92 (64%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQV 179
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L E Q+
Sbjct: 179 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLTSAERQI 231
Query: 180 KIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
KIWFQNRRMK KK K +G+ G S G+
Sbjct: 232 KIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 263
>UNIPROTKB|Q8T940 [details] [associations]
symbol:Ubx "Homeotic protein ultrabithorax" species:39708
"Junonia coenia" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AY074760 ProteinModelPortal:Q8T940 SMR:Q8T940 Uniprot:Q8T940
Length = 253
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 39/62 (62%), Positives = 43/62 (69%)
Query: 134 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKR 193
L GR +T Q ELEKEFH N YLTR RRIE+A L L E Q+KIWFQNRRMK KK
Sbjct: 158 LRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 217
Query: 194 IK 195
I+
Sbjct: 218 IQ 219
>ZFIN|ZDB-GENE-000329-2 [details] [associations]
symbol:hoxb7a "homeo box B7a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000329-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 eggNOG:NOG238660 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z EMBL:AL645782 EMBL:DQ060542 EMBL:Y14533
IPI:IPI00506071 RefSeq:NP_001108563.1 UniGene:Dr.75790
ProteinModelPortal:Q8AWY9 SMR:Q8AWY9 STRING:Q8AWY9 PRIDE:Q8AWY9
Ensembl:ENSDART00000078453 GeneID:58044 KEGG:dre:58044 CTD:58044
InParanoid:Q8AWY9 OMA:NNENNLR NextBio:20892308 ArrayExpress:Q8AWY9
Bgee:Q8AWY9 Uniprot:Q8AWY9
Length = 227
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 38/58 (65%), Positives = 43/58 (74%)
Query: 138 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
GR ++ Q ELEKEFHFN+YL+R RRIEIA L L E Q+KIWFQNRRMK KK K
Sbjct: 148 GRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 205
>ZFIN|ZDB-GENE-000822-1 [details] [associations]
symbol:hoxc6b "homeo box C6b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-1 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:CABZ01085067 IPI:IPI00484929
Ensembl:ENSDART00000067698 OMA:EIANTLC ArrayExpress:F1RAL1
Bgee:F1RAL1 Uniprot:F1RAL1
Length = 228
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 41/76 (53%), Positives = 51/76 (67%)
Query: 121 YPPPAALSQHQSLLNNS----GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 176
YP ++ H + S GR ++ Q ELEKEFH+N+YLTR RRIEIA+ L L+E
Sbjct: 118 YPWMQRMNSHSGVGYGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSE 177
Query: 177 TQVKIWFQNRRMKQKK 192
Q+KIWFQNRRMK KK
Sbjct: 178 RQIKIWFQNRRMKWKK 193
>MGI|MGI:88362 [details] [associations]
symbol:Cdx4 "caudal type homeobox 4" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0001890 "placenta development" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0060711 "labyrinthine layer development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:88362 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
CTD:1046 EMBL:L08061 IPI:IPI00116620 PIR:A56676 RefSeq:NP_031700.1
UniGene:Mm.4353 ProteinModelPortal:Q07424 SMR:Q07424 STRING:Q07424
PhosphoSite:Q07424 PRIDE:Q07424 Ensembl:ENSMUST00000033689
GeneID:12592 KEGG:mmu:12592 InParanoid:Q07424 NextBio:281742
Bgee:Q07424 CleanEx:MM_CDX4 Genevestigator:Q07424
GermOnline:ENSMUSG00000031326 Uniprot:Q07424
Length = 282
Score = 173 (66.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 41/83 (49%), Positives = 52/83 (62%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R +T+ Q ELEKEFH N+Y+T R+ E+A L L+E QVKIWFQNRR K++K IK+ I
Sbjct: 175 RVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKI 234
Query: 199 --LIGVGEGSLMGAQGSSPNGGL 219
G GS+ GS G L
Sbjct: 235 SQFENTG-GSVQSDSGSISPGEL 256
Score = 36 (17.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 104 HPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSGRTN 141
+P PST T P+ + P + + +L SG +N
Sbjct: 86 YPGPPSTMGTVPMNDMTSPVFGS-PDYSTLGPTSGASN 122
>UNIPROTKB|E2QUE0 [details] [associations]
symbol:HOXC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0001501 GO:GO:0050905 GO:GO:0009954
GO:GO:0019907 KO:K09295 GeneTree:ENSGT00700000104054 CTD:3226
OMA:CGVMRGC GO:GO:0021520 EMBL:AAEX03014974 RefSeq:XP_543626.3
Ensembl:ENSCAFT00000010694 GeneID:486500 KEGG:cfa:486500
NextBio:20860264 Uniprot:E2QUE0
Length = 342
Score = 176 (67.0 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R +T Q ELEKEF FN YLTR RR+EI+ + L + QVKIWFQNRRMK KK +E
Sbjct: 272 RCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNRE 329
Score = 39 (18.8 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 93 PSELSPLGVHPHPTSPSTDYTTP-LTALKYPPPAA 126
P + S LG H P PS +P +AL PP A
Sbjct: 132 PLQESCLGEHEVPV-PSYYRASPSYSALDKPPHCA 165
Score = 35 (17.4 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 114 TPLTALKYPPPAALSQHQSLLNNSG 138
TP + + P P + QSL G
Sbjct: 201 TPKSDSQTPSPGEIKTEQSLAGPKG 225
>UNIPROTKB|J9NW05 [details] [associations]
symbol:HOXB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
OMA:ATYYDNT EMBL:AAEX03006513 EMBL:AAEX03006514
Ensembl:ENSCAFT00000042839 Uniprot:J9NW05
Length = 436
Score = 199 (75.1 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 47/94 (50%), Positives = 61/94 (64%)
Query: 120 KYPPPAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNET-- 177
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E
Sbjct: 183 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERER 235
Query: 178 QVKIWFQNRRMKQKKRIK-EGILIGVGEGSLMGA 210
Q+KIWFQNRRMK KK K +G+ G S G+
Sbjct: 236 QIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGS 269
>UNIPROTKB|Q3C1V8 [details] [associations]
symbol:BSX "Brain-specific homeobox protein homolog"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0042755 "eating behavior" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060056 "mammary gland
involution" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0042755 GO:GO:0007626 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0060056 HOGENOM:HOG000231924 CTD:390259
eggNOG:NOG242366 HOVERGEN:HBG050738 OMA:LHKPEHH OrthoDB:EOG4KKZ41
EMBL:AP003040 EMBL:AB231738 IPI:IPI00847613 RefSeq:NP_001091639.1
UniGene:Hs.449687 ProteinModelPortal:Q3C1V8 SMR:Q3C1V8
STRING:Q3C1V8 PhosphoSite:Q3C1V8 DMDM:156630463 PRIDE:Q3C1V8
Ensembl:ENST00000343035 GeneID:390259 KEGG:hsa:390259
UCSC:uc010rzs.2 GeneCards:GC11M122848 HGNC:HGNC:20450 HPA:HPA015654
MIM:611074 neXtProt:NX_Q3C1V8 PharmGKB:PA162377618
InParanoid:Q3C1V8 PhylomeDB:Q3C1V8 GenomeRNAi:390259 NextBio:103586
Bgee:Q3C1V8 CleanEx:HS_BSX Genevestigator:Q3C1V8 Uniprot:Q3C1V8
Length = 233
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 51/132 (38%), Positives = 69/132 (52%)
Query: 73 SSLRDLFPVKGEIGVTKVQIPSELSPLGVHP-HPTSPSTDYTTPLTALKYPPPAALS--Q 129
SSL P+ + G + P+ L+P HP H Y LT P PA Q
Sbjct: 43 SSLASRVPLL-DYGYPLMPTPTLLAPHAHHPLHKGDHHHPYF--LTTSGMPVPALFPHPQ 99
Query: 130 HQSL-----LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQ 184
H L RT F++ QL+ LEK F +YL+ R+E+A+ L L+ETQVK WFQ
Sbjct: 100 HAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQ 159
Query: 185 NRRMKQKKRIKE 196
NRRMK KK++++
Sbjct: 160 NRRMKHKKQLRK 171
>MGI|MGI:2669849 [details] [associations]
symbol:Bsx "brain specific homeobox" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0042755 "eating behavior" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0060056 "mammary gland involution"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:2669849 GO:GO:0005737 GO:GO:0007420
GO:GO:0043565 GO:GO:0045944 GO:GO:0042755 GO:GO:0007626
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060056
GeneTree:ENSGT00700000104097 HOGENOM:HOG000231924 CTD:390259
eggNOG:NOG242366 HOVERGEN:HBG050738 OMA:LHKPEHH OrthoDB:EOG4KKZ41
EMBL:AY233396 EMBL:BC104386 EMBL:BC104387 IPI:IPI00329841
IPI:IPI00857232 RefSeq:NP_839976.1 UniGene:Mm.261652
ProteinModelPortal:Q810B3 SMR:Q810B3 STRING:Q810B3
PhosphoSite:Q810B3 PRIDE:Q810B3 Ensembl:ENSMUST00000067375
GeneID:244813 KEGG:mmu:244813 UCSC:uc009paa.1 InParanoid:Q3SXB1
NextBio:386432 Bgee:Q810B3 CleanEx:MM_BSX Genevestigator:Q810B3
Uniprot:Q810B3
Length = 232
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 51/132 (38%), Positives = 69/132 (52%)
Query: 73 SSLRDLFPVKGEIGVTKVQIPSELSPLGVHP-HPTSPSTDYTTPLTALKYPPPAALS--Q 129
SSL P+ + G + P+ L+P HP H Y LT P PA Q
Sbjct: 43 SSLASRVPLL-DYGYPLMPTPTLLTPHAHHPLHKGDHHHPYF--LTTSGMPVPALFPHPQ 99
Query: 130 HQSL-----LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQ 184
H L RT F++ QL+ LEK F +YL+ R+E+A+ L L+ETQVK WFQ
Sbjct: 100 HAELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQ 159
Query: 185 NRRMKQKKRIKE 196
NRRMK KK++++
Sbjct: 160 NRRMKHKKQLRK 171
>FB|FBgn0041156 [details] [associations]
symbol:exex "extra-extra" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007412 "axon target recognition"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046331 "lateral inhibition" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:AE014296 GO:GO:0043565 GO:GO:0007417
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0046331 GO:GO:0007412
GeneTree:ENSGT00660000095141 eggNOG:NOG322049 HSSP:P14653
EMBL:AY084165 RefSeq:NP_648164.1 UniGene:Dm.5205 SMR:Q9VSC2
STRING:Q9VSC2 EnsemblMetazoa:FBtr0076751 GeneID:38884
KEGG:dme:Dmel_CG8254 UCSC:CG8254-RA CTD:38884 FlyBase:FBgn0041156
InParanoid:Q9VSC2 OMA:HHRIPEL OrthoDB:EOG431ZFJ GenomeRNAi:38884
NextBio:810844 Uniprot:Q9VSC2
Length = 525
Score = 200 (75.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 46/101 (45%), Positives = 63/101 (62%)
Query: 98 PLGVHPHPTSPSTDYTTPLTALKYP-PPAALSQHQSLLNNSGR--TNFTNKQLTELEKEF 154
P+G + P+ ++ L + P A H ++L + R T FT++QL ELEK+F
Sbjct: 399 PMGHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLLELEKQF 458
Query: 155 HFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK 195
NKYL+R +R E+AS L L+ETQVKIWFQNRRMK K+ K
Sbjct: 459 KQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKK 499
>ZFIN|ZDB-GENE-040415-1 [details] [associations]
symbol:mnx2a "motor neuron and pancreas homeobox 2a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-040415-1 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG322049 HOVERGEN:HBG051910 HSSP:P14653
EMBL:AY445045 IPI:IPI00497108 UniGene:Dr.91916
ProteinModelPortal:Q6SYZ0 SMR:Q6SYZ0 InParanoid:Q6SYZ0
NextBio:20817872 Uniprot:Q6SYZ0
Length = 309
Score = 193 (73.0 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK--RIKE 196
RT FT++QL ELE +F NKYL+R +R E+A+ L L ETQVKIWFQNRRMK K+ + KE
Sbjct: 154 RTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSRKAKE 213
Query: 197 GILIGVGEGSLMGAQGSSP 215
+G G +G+ P
Sbjct: 214 QAAQLETDGCKSGKRGNKP 232
>WB|WBGene00003102 [details] [associations]
symbol:mab-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
OMA:TSANFGE NextBio:891072 Uniprot:P10038
Length = 200
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 48/106 (45%), Positives = 60/106 (56%)
Query: 97 SPLGVHP-HPTSPSTDYT-TPLTALKYPPPAALSQHQSLLNNSGRTN--FTNKQLTELEK 152
+P +P TS + T T + A+ P + + S RT ++ Q ELEK
Sbjct: 75 NPFAYNPLQATSANFGETRTSMPAISQPVFPWMKMGGAKGGESKRTRQTYSRSQTLELEK 134
Query: 153 EFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIK-EG 197
EFH++KYLTR RR EI+ L L E QVKIWFQNRRMK KK K EG
Sbjct: 135 EFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEG 180
>ZFIN|ZDB-GENE-041008-135 [details] [associations]
symbol:gsx1 "GS homeobox 1" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-041008-135 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:219409 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
OMA:HNCKCSS OrthoDB:EOG4GTKDV GeneTree:ENSGT00700000104161
EMBL:BX247876 EMBL:AY486348 IPI:IPI00492455 RefSeq:NP_001012251.1
UniGene:Dr.91023 SMR:Q5QHS3 Ensembl:ENSDART00000051833
GeneID:449875 KEGG:dre:449875 InParanoid:Q5QHS3 NextBio:20832927
Uniprot:Q5QHS3
Length = 243
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 43/70 (61%), Positives = 50/70 (71%)
Query: 128 SQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRR 187
SQ QS + RT FT+ QL ELE+EF N YL+R RRIEIA+ L L+E QVKIWFQNRR
Sbjct: 131 SQLQS--SKRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRR 188
Query: 188 MKQKKRIKEG 197
+K KK K G
Sbjct: 189 VKHKKEGKSG 198
>FB|FBgn0000439 [details] [associations]
symbol:Dfd "Deformed" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007420 "brain
development" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS;TAS] [GO:0007380 "specification of segmental identity,
head" evidence=NAS] [GO:0060322 "head development" evidence=IMP]
[GO:0006917 "induction of apoptosis" evidence=IGI;IMP] [GO:0048598
"embryonic morphogenesis" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0007420 GO:GO:0006917 GO:GO:0048598
GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0003705
GO:GO:0000122 EMBL:AE001572 GO:GO:0000977 GO:GO:0060322 EMBL:X05136
EMBL:M13373 PIR:A26638 RefSeq:NP_477201.1 UniGene:Dm.5282
ProteinModelPortal:P07548 SMR:P07548 DIP:DIP-18055N IntAct:P07548
MINT:MINT-858733 STRING:P07548 EnsemblMetazoa:FBtr0081621
GeneID:40832 KEGG:dme:Dmel_CG2189 UCSC:CG2189-RA CTD:40832
FlyBase:FBgn0000439 eggNOG:NOG314883 HOGENOM:HOG000290519
InParanoid:P07548 KO:K09304 OMA:DLMAETT OrthoDB:EOG49CNQM
PhylomeDB:P07548 GenomeRNAi:40832 NextBio:820832 Bgee:P07548
GermOnline:CG2189 Uniprot:P07548
Length = 586
Score = 200 (75.5 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 38/54 (70%), Positives = 44/54 (81%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKK 192
RT +T Q+ ELEKEFH+N+YLTR RRIEIA L L+E Q+KIWFQNRRMK KK
Sbjct: 370 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 423
>UNIPROTKB|O42230 [details] [associations]
symbol:GBX2 "Homeobox protein GBX-2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG315879 HOVERGEN:HBG003967 KO:K09321 OrthoDB:EOG4N5VXB
EMBL:AF022151 IPI:IPI00603632 RefSeq:NP_990399.1 UniGene:Gga.565
ProteinModelPortal:O42230 SMR:O42230 STRING:O42230 GeneID:395950
KEGG:gga:395950 CTD:2637 HOGENOM:HOG000046878 InParanoid:O42230
NextBio:20816015 Uniprot:O42230
Length = 340
Score = 194 (73.4 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 47/99 (47%), Positives = 60/99 (60%)
Query: 103 PHPTSPSTDYTTPLTALKYPPPAALSQHQSLL----NNSGRTNFTNKQLTELEKEFHFNK 158
P P +P + TAL+ PP+A + + N RT FT++QL ELEKEFH K
Sbjct: 205 PAPAAPREEDCG--TALEENPPSAANAAANAAATGKNRRRRTAFTSEQLLELEKEFHCKK 262
Query: 159 YLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEG 197
YL+ R +IA L+L+E QVKIWFQNRR K K R+K G
Sbjct: 263 YLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK-RVKAG 300
>UNIPROTKB|E1BAG4 [details] [associations]
symbol:HOXD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA]
[GO:0030879 "mammary gland development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0007519
"skeletal muscle tissue development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048935 "peripheral nervous system neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035115 GO:GO:0009954
GO:GO:0048704 GO:GO:0035137 GO:GO:0030879 GO:GO:0048935
GO:GO:0007519 GeneTree:ENSGT00700000104054 OMA:SGPEFSC
EMBL:DAAA02004174 IPI:IPI00706320 Ensembl:ENSBTAT00000021336
Uniprot:E1BAG4
Length = 354
Score = 194 (73.4 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 51/108 (47%), Positives = 55/108 (50%)
Query: 94 SELSPLGVHPHPTSPSTDYT-----TPLTALKYPPPAALSQHQSLLNNSGRTNFTNKQLT 148
SE S HP P P + P L PAA H R +T Q
Sbjct: 242 SEPSACSDHPSPGCPLKEEEKQHSQAPQQQLDPNNPAANWIHARSTRKK-RCPYTKYQTL 300
Query: 149 ELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
ELEKEF FN YLTR RR E+A +L L E QVKIWFQNRRMK KK KE
Sbjct: 301 ELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMSKE 348
>RGD|1561529 [details] [associations]
symbol:Cdx4 "caudal type homeo box 4" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA;ISO] [GO:0001890 "placenta development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0060711 "labyrinthine layer development"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1561529 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000122 GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 KO:K09312
OrthoDB:EOG42FSK7 CTD:1046 OMA:FQPIEIQ EMBL:CH473969
IPI:IPI00202224 RefSeq:NP_001100412.1 UniGene:Rn.218668
Ensembl:ENSRNOT00000003973 GeneID:302400 KEGG:rno:302400
UCSC:RGD:1561529 NextBio:649569 Uniprot:D3ZF67
Length = 288
Score = 172 (65.6 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 40/82 (48%), Positives = 51/82 (62%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
R +T+ Q ELEKEFH N+Y+T R+ E+A L L+E QVKIWFQNRR K++K IK+ I
Sbjct: 181 RVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKI 240
Query: 199 L-IGVGEGSLMGAQGSSPNGGL 219
GS+ GS G L
Sbjct: 241 SQFENSGGSVQSDSGSISPGEL 262
Score = 35 (17.4 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 104 HPTSPSTDYTTPLTALKYPPPAALSQHQSLLNNSG 138
+P ST T P+ + PA S S L +G
Sbjct: 86 YPGPSSTMGTVPMNDMTSSSPAFGSPDYSTLGPTG 120
>FB|FBgn0015561 [details] [associations]
symbol:unpg "unplugged" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0051960 "regulation of nervous
system development" evidence=IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007424 "open tracheal system development"
evidence=TAS] [GO:0007426 "tracheal outgrowth, open tracheal
system" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0007420
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007426
eggNOG:NOG315879 KO:K09321 GeneTree:ENSGT00660000095141 EMBL:U35427
EMBL:BT022753 RefSeq:NP_477146.1 UniGene:Dm.6807
ProteinModelPortal:Q4V5A3 SMR:Q4V5A3 STRING:Q4V5A3 PRIDE:Q4V5A3
EnsemblMetazoa:FBtr0088586 GeneID:35942 KEGG:dme:Dmel_CG1650
UCSC:CG1650-RA CTD:35942 FlyBase:FBgn0015561 InParanoid:Q4V5A3
OMA:FAQNHER OrthoDB:EOG4H70T3 PhylomeDB:Q4V5A3 GenomeRNAi:35942
NextBio:795976 Bgee:Q4V5A3 GO:GO:0051960 Uniprot:Q4V5A3
Length = 485
Score = 182 (69.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKEGI 198
RT FT++QL ELE+EFH KYL+ R +IA+ L+L+E QVKIWFQNRR K K R+K G+
Sbjct: 323 RTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWK-RVKAGL 381
Query: 199 LI-GVGE-GSLMGAQ 211
G+G G+ G +
Sbjct: 382 TSHGLGRNGTTSGTK 396
Score = 37 (18.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 16/51 (31%), Positives = 20/51 (39%)
Query: 83 GEIGVTKVQIPSELSPLGVHPHPTSPSTDYT--TPLTALKYPPPAALSQHQ 131
GEIG ++ P+ P P S + TP TA PP Q Q
Sbjct: 10 GEIGT--MESPTTRLASKPFPKPFSIESLIANQTPATATPPSPPEERDQEQ 58
>UNIPROTKB|A5PJK3 [details] [associations]
symbol:HOXD10 "HOXD10 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0050905 "neuromuscular
process" evidence=IEA] [GO:0048935 "peripheral nervous system
neuron development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0035136 "forelimb morphogenesis" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 GO:GO:0048935 GO:GO:0007519
eggNOG:NOG248153 HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295
GeneTree:ENSGT00700000104054 GO:GO:0021520 CTD:3236 OMA:NPRGSAK
OrthoDB:EOG4RV2RP EMBL:DAAA02004174 EMBL:BC142145 IPI:IPI00695000
RefSeq:NP_001092575.1 UniGene:Bt.24731 SMR:A5PJK3 STRING:A5PJK3
Ensembl:ENSBTAT00000021334 GeneID:540251 KEGG:bta:540251
InParanoid:A5PJK3 NextBio:20878518 Uniprot:A5PJK3
Length = 340
Score = 174 (66.3 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R +T Q ELEKEF FN YLTR RR+EI+ + L + QVKIWFQNRRMK KK +E
Sbjct: 270 RCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 327
Score = 38 (18.4 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 99 LGVHPHPTSPSTD-YTTPLTALKYPPP 124
+G++ HP P D +T P + + P
Sbjct: 67 MGMNVHPYIPQVDSWTDPNRSCRIEQP 93
>UNIPROTKB|P28358 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0035136 "forelimb morphogenesis"
evidence=IEA] [GO:0035137 "hindlimb morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048935
"peripheral nervous system neuron development" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0050905 GO:GO:0009954
GO:GO:0048704 GO:GO:0035136 GO:GO:0035137 GO:GO:0048935
GO:GO:0007519 HOGENOM:HOG000231182 HOVERGEN:HBG052934 KO:K09295
eggNOG:NOG241114 GO:GO:0021520 EMBL:X59373 EMBL:BC069619
EMBL:BC074760 IPI:IPI00292735 PIR:A42008 PIR:S18650
RefSeq:NP_002139.2 UniGene:Hs.123070 ProteinModelPortal:P28358
SMR:P28358 STRING:P28358 PhosphoSite:P28358 DMDM:143811403
PRIDE:P28358 DNASU:3236 Ensembl:ENST00000249501 GeneID:3236
KEGG:hsa:3236 UCSC:uc002ukj.3 CTD:3236 GeneCards:GC02P176945
HGNC:HGNC:5133 MIM:142984 MIM:192950 neXtProt:NX_P28358
Orphanet:295203 Orphanet:295201 PharmGKB:PA29407 InParanoid:P28358
OMA:NPRGSAK OrthoDB:EOG4RV2RP PhylomeDB:P28358 GenomeRNAi:3236
NextBio:12879 Bgee:P28358 CleanEx:HS_HOXD10 Genevestigator:P28358
GermOnline:ENSG00000128710 Uniprot:P28358
Length = 340
Score = 174 (66.3 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R +T Q ELEKEF FN YLTR RR+EI+ + L + QVKIWFQNRRMK KK +E
Sbjct: 270 RCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 327
Score = 38 (18.4 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 99 LGVHPHPTSPSTD-YTTPLTALKYPPP 124
+G++ HP P D +T P + + P
Sbjct: 67 MGMNVHPYIPQVDSWTDPNRSCRIEQP 93
>UNIPROTKB|F1RZG3 [details] [associations]
symbol:HOXD10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0035136 "forelimb morphogenesis" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0008344 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0050905 GO:GO:0009954 GO:GO:0048704
GO:GO:0035136 GO:GO:0035137 GO:GO:0048935 GO:GO:0007519 KO:K09295
GeneTree:ENSGT00700000104054 GO:GO:0021520 CTD:3236 OMA:NPRGSAK
EMBL:CU570829 RefSeq:XP_003133545.1 Ensembl:ENSSSCT00000017402
GeneID:100515344 KEGG:ssc:100515344 Uniprot:F1RZG3
Length = 340
Score = 174 (66.3 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R +T Q ELEKEF FN YLTR RR+EI+ + L + QVKIWFQNRRMK KK +E
Sbjct: 270 RCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 327
Score = 38 (18.4 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 99 LGVHPHPTSPSTD-YTTPLTALKYPPP 124
+G++ HP P D +T P + + P
Sbjct: 67 MGMNVHPYIPQVDSWTDPNRSCRIEQP 93
>MGI|MGI:96202 [details] [associations]
symbol:Hoxd10 "homeobox D10" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IGI] [GO:0008344 "adult locomotory behavior" evidence=IGI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0009954 "proximal/distal pattern formation"
evidence=IGI] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0035136 "forelimb morphogenesis"
evidence=IGI] [GO:0035137 "hindlimb morphogenesis" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] [GO:0048935
"peripheral nervous system neuron development" evidence=IGI]
[GO:0050905 "neuromuscular process" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96202 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0045944 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0050905
GO:GO:0009954 GO:GO:0048704 GO:GO:0035136 GO:GO:0035137
GO:GO:0048935 GO:GO:0007519 HOGENOM:HOG000231182 HOVERGEN:HBG052934
KO:K09295 GeneTree:ENSGT00700000104054 eggNOG:NOG241114
GO:GO:0021520 CTD:3236 OMA:NPRGSAK OrthoDB:EOG4RV2RP EMBL:X62669
EMBL:BC013463 EMBL:BC048690 EMBL:X14715 IPI:IPI00119646 PIR:S20879
RefSeq:NP_038582.2 UniGene:Mm.24420 ProteinModelPortal:P28359
SMR:P28359 IntAct:P28359 MINT:MINT-1172392 STRING:P28359
PhosphoSite:P28359 PRIDE:P28359 Ensembl:ENSMUST00000061745
GeneID:15430 KEGG:mmu:15430 InParanoid:P28359 NextBio:288190
Bgee:P28359 CleanEx:MM_HOXD10 Genevestigator:P28359
GermOnline:ENSMUSG00000050368 Uniprot:P28359
Length = 340
Score = 174 (66.3 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 139 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQVKIWFQNRRMKQKKRIKE 196
R +T Q ELEKEF FN YLTR RR+EI+ + L + QVKIWFQNRRMK KK +E
Sbjct: 270 RCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 327
Score = 38 (18.4 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 99 LGVHPHPTSPSTD-YTTPLTALKYPPP 124
+G++ HP P D +T P + + P
Sbjct: 67 MGMNVHPYIPQVDSWTDPNRSCRIEQP 93
WARNING: HSPs involving 1176 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 221 186 0.00083 110 3 11 22 0.47 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1426
No. of states in DFA: 591 (63 KB)
Total size of DFA: 147 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.62u 0.07s 22.69t Elapsed: 00:00:11
Total cpu time: 22.65u 0.07s 22.72t Elapsed: 00:00:11
Start: Thu Aug 15 12:56:49 2013 End: Thu Aug 15 12:57:00 2013
WARNINGS ISSUED: 2