Your job contains 1 sequence.
>psy16814
MNKIFKIFQSTLVINNVQRTFTTLYKPIFVKNNPLQEFPKAPSILPYEQINLLQPILPSV
MLVNTWKYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQILFHPKDKNTWILSGVSTNK
SREW
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16814
(124 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0042112 - symbol:mRpL36 "mitochondrial ribosomal p... 122 8.7e-08 1
POMBASE|SPBC83.06c - symbol:SPBC83.06c "mitochondrial rib... 103 9.0e-06 1
UNIPROTKB|Q9P0J6 - symbol:MRPL36 "39S ribosomal protein L... 99 2.4e-05 1
MGI|MGI:2137228 - symbol:Mrpl36 "mitochondrial ribosomal ... 99 2.4e-05 1
WB|WBGene00010783 - symbol:mrpl-36 species:6239 "Caenorha... 98 3.0e-05 1
UNIPROTKB|E2RNM7 - symbol:MRPL36 "Ribosomal protein" spec... 94 8.1e-05 1
RGD|1306375 - symbol:Mrpl36 "mitochondrial ribosomal prot... 94 8.1e-05 1
UNIPROTKB|G3MYN6 - symbol:MRPL36 "Ribosomal protein" spec... 93 0.00010 1
UNIPROTKB|P0A7Q6 - symbol:rpmJ "50S ribosomal subunit pro... 92 0.00013 1
UNIPROTKB|F1NQQ6 - symbol:F1NQQ6 "Ribosomal protein" spec... 92 0.00013 1
ZFIN|ZDB-GENE-060503-821 - symbol:mrpl36 "mitochondrial r... 86 0.00057 1
TIGR_CMR|CPS_0622 - symbol:CPS_0622 "ribosomal protein L3... 85 0.00072 1
>FB|FBgn0042112 [details] [associations]
symbol:mRpL36 "mitochondrial ribosomal protein L36"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000473 Pfam:PF00444 EMBL:AE014296
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 HSSP:P80256 CTD:64979
GeneTree:ENSGT00390000010866 eggNOG:NOG304857 EMBL:AY102667
RefSeq:NP_652658.1 UniGene:Dm.11991 SMR:Q9I7Q9 STRING:Q9I7Q9
EnsemblMetazoa:FBtr0076735 GeneID:59151 KEGG:dme:Dmel_CG18767
FlyBase:FBgn0042112 InParanoid:Q9I7Q9 OMA:SWILTHA OrthoDB:EOG4VX0NK
GenomeRNAi:59151 NextBio:841539 Uniprot:Q9I7Q9
Length = 128
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 52 LLQPILPSVMLVNTWKYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQILFHPKDKNTW 111
LL P V V +K K ++K+RCK CY + ++ + +C P+HKQ+ +D +W
Sbjct: 56 LLTPGSTLVQQVAGFKVKGRLKRRCKDCYIVVRQERGYVICPTHPRHKQMSMKKRDYKSW 115
Query: 112 ILSGVSTNKSR 122
IL+ + +K R
Sbjct: 116 ILTHATQSKER 126
>POMBASE|SPBC83.06c [details] [associations]
symbol:SPBC83.06c "mitochondrial ribosomal protein
subunit L36, Rtc6 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000473 Pfam:PF00444 PomBase:SPBC83.06c
EMBL:CU329671 GO:GO:0005762 GO:GO:0003735 GO:GO:0032543
PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022 eggNOG:COG0257
HSSP:P80256 HOGENOM:HOG000111586 PIR:T40695 RefSeq:NP_595638.2
STRING:O94690 GeneID:2540781 OrthoDB:EOG4M3DKD NextBio:20801899
Uniprot:O94690
Length = 92
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 66 WKYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHK 99
+K KA VKKRC CYF+ ++G L+ LC P+HK
Sbjct: 55 FKVKASVKKRCSSCYFVRRKGRLYVLCKKHPRHK 88
>UNIPROTKB|Q9P0J6 [details] [associations]
symbol:MRPL36 "39S ribosomal protein L36, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=NAS] [GO:0006412 "translation" evidence=NAS]
InterPro:IPR000473 Pfam:PF00444 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 EMBL:CH471102 CleanEx:HS_BRIP1 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 CTD:64979 HOGENOM:HOG000111586
OrthoDB:EOG4FN4KF EMBL:AB049654 EMBL:AF151109 EMBL:EF036487
EMBL:AF155653 EMBL:AK312001 EMBL:BC020642 EMBL:BC104652
IPI:IPI00007622 RefSeq:NP_115868.1 UniGene:Hs.719465
ProteinModelPortal:Q9P0J6 SMR:Q9P0J6 IntAct:Q9P0J6 STRING:Q9P0J6
DMDM:24212267 PRIDE:Q9P0J6 DNASU:64979 Ensembl:ENST00000382647
Ensembl:ENST00000505059 Ensembl:ENST00000505818
Ensembl:ENST00000508987 GeneID:64979 KEGG:hsa:64979 UCSC:uc003jcx.4
GeneCards:GC05M001851 HGNC:HGNC:14490 HPA:HPA047238 MIM:611842
neXtProt:NX_Q9P0J6 PharmGKB:PA30967 eggNOG:NOG267357
HOVERGEN:HBG029144 InParanoid:Q9P0J6 OMA:IKKRCKD PhylomeDB:Q9P0J6
GenomeRNAi:64979 NextBio:67168 ArrayExpress:Q9P0J6 Bgee:Q9P0J6
CleanEx:HS_MRPL36 Genevestigator:Q9P0J6 GermOnline:ENSG00000171421
Uniprot:Q9P0J6
Length = 103
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 51 NLLQP-ILPSVMLVNTWKYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQ 100
+LL P +LP ++ +K K +KKRCK CY + + G + C P+HKQ
Sbjct: 50 SLLSPGLLPHLLPALGFKNKTVLKKRCKDCYLVKRRGRWYVYCKTHPRHKQ 100
>MGI|MGI:2137228 [details] [associations]
symbol:Mrpl36 "mitochondrial ribosomal protein L36"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 MGI:MGI:2137228 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 CTD:64979
GeneTree:ENSGT00390000010866 HOGENOM:HOG000111586 OrthoDB:EOG4FN4KF
eggNOG:NOG267357 HOVERGEN:HBG029144 OMA:IKKRCKD EMBL:AB049655
EMBL:AK075780 EMBL:AK131597 EMBL:AK131601 EMBL:AK131604
EMBL:AK160778 EMBL:BC009166 IPI:IPI00118224 RefSeq:NP_444393.1
UniGene:Mm.26775 ProteinModelPortal:Q99N90 SMR:Q99N90 PRIDE:Q99N90
Ensembl:ENSMUST00000022098 GeneID:94066 KEGG:mmu:94066
UCSC:uc007rdi.1 InParanoid:Q99N90 NextBio:352049 Bgee:Q99N90
CleanEx:MM_MRPL36 Genevestigator:Q99N90
GermOnline:ENSMUSG00000021607 Uniprot:Q99N90
Length = 102
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 26 KPIFVKNNPLQEFPKAPSILPYEQINLLQPILPSVMLVNTWKYKAKVKKRCKGCYFLYKE 85
KP + L P+A + +P LP+++ +K K +KKRCK CY + +
Sbjct: 26 KPRVFSSFLLGTLPRAKPCAEVRSVLCGRP-LPTLLPSLGFKTKGVIKKRCKDCYKVKRR 84
Query: 86 GVLHNLCHLKPKHKQ 100
G LC PKHKQ
Sbjct: 85 GRWFILCKTNPKHKQ 99
>WB|WBGene00010783 [details] [associations]
symbol:mrpl-36 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000473 Pfam:PF00444 GO:GO:0040010 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:Z22180 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 RefSeq:NP_001022680.1
ProteinModelPortal:Q7YWY8 SMR:Q7YWY8 PaxDb:Q7YWY8
EnsemblMetazoa:K11H3.6 GeneID:259526 KEGG:cel:CELE_K11H3.6
UCSC:K11H3.6 CTD:259526 WormBase:K11H3.6 eggNOG:NOG304857
HOGENOM:HOG000019111 InParanoid:Q7YWY8 OMA:ENPRHKA NextBio:952040
Uniprot:Q7YWY8
Length = 77
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 66 WKYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHK 99
+K K+++K RC+ CYFL EG LH C+ P+HK
Sbjct: 33 FKVKSRLKLRCRSCYFLRVEGRLHVECNENPRHK 66
>UNIPROTKB|E2RNM7 [details] [associations]
symbol:MRPL36 "Ribosomal protein" species:9615 "Canis lupus
familiaris" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 HAMAP:MF_00251 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 CTD:64979
GeneTree:ENSGT00390000010866 EMBL:AAEX03017215 RefSeq:XP_545188.2
ProteinModelPortal:E2RNM7 Ensembl:ENSCAFT00000016580 GeneID:488065
KEGG:cfa:488065 OMA:GVIKERC NextBio:20861504 Uniprot:E2RNM7
Length = 110
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 55 PILPSVMLVNTWKYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQ 100
P+LP + +K K +K+RC+ CY + + G + C PKHKQ
Sbjct: 62 PLLPGLQPALGFKTKGVIKERCRDCYRVKRRGRWYIYCKTNPKHKQ 107
>RGD|1306375 [details] [associations]
symbol:Mrpl36 "mitochondrial ribosomal protein L36"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000473 Pfam:PF00444
RGD:1306375 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CH474002 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
CTD:64979 GeneTree:ENSGT00390000010866 HOGENOM:HOG000111586
OrthoDB:EOG4FN4KF eggNOG:NOG267357 EMBL:BC167015 IPI:IPI00360015
RefSeq:NP_001102349.1 RefSeq:XP_003748731.1 RefSeq:XP_003753204.1
UniGene:Rn.7601 ProteinModelPortal:B2RZ39 SMR:B2RZ39
Ensembl:ENSRNOT00000029531 GeneID:100910528 GeneID:364656
KEGG:rno:100910528 KEGG:rno:364656 UCSC:RGD:1306375 OMA:SAKPCAE
NextBio:685757 Genevestigator:B2RZ39 Uniprot:B2RZ39
Length = 97
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 42 PSILPYEQINLLQ---PILPSVMLVNTWKYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKH 98
PS P ++ L P+L S+ +K K +KKRC+ CY + + G LC PKH
Sbjct: 34 PSAKPCAEVRSLLCGGPVL-SLQPSLGFKTKGVIKKRCRDCYMVKRRGRWFVLCKTNPKH 92
Query: 99 KQ 100
KQ
Sbjct: 93 KQ 94
>UNIPROTKB|G3MYN6 [details] [associations]
symbol:MRPL36 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 HAMAP:MF_00251 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 GeneTree:ENSGT00390000010866
EMBL:DAAA02051422 Ensembl:ENSBTAT00000064878 OMA:RAGPATH
Uniprot:G3MYN6
Length = 100
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 66 WKYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQ 100
+K K +KKRCKGCY + + G C PKHKQ
Sbjct: 63 FKTKGVLKKRCKGCYLVKRRGRWFIYCKTNPKHKQ 97
>UNIPROTKB|P0A7Q6 [details] [associations]
symbol:rpmJ "50S ribosomal subunit protein L36"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR000473
Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251 EMBL:X01563 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 EMBL:U18997 GO:GO:0005840 GO:GO:0003735 PDB:2VHM
PDBsum:2VHM PDB:2RDO PDBsum:2RDO PANTHER:PTHR18804 SUPFAM:SSF57840
TIGRFAMs:TIGR01022 KO:K02919 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11
PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W
PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF
PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4
PDB:2AWB PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA
PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX
PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2
PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R
PDB:3I1T PDB:3I20 PDB:3I22 PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS
PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0
PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM
PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG
PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ
PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N
PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK
PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20
PDBsum:3I22 PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX eggNOG:COG0257
HOGENOM:HOG000111584 ProtClustDB:PRK00465 EMBL:M12432 PIR:S14057
RefSeq:NP_417758.1 RefSeq:YP_492133.1 ProteinModelPortal:P0A7Q6
SMR:P0A7Q6 IntAct:P0A7Q6 EnsemblBacteria:EBESCT00000002931
EnsemblBacteria:EBESCT00000016384 GeneID:12934393 GeneID:947805
KEGG:ecj:Y75_p3877 KEGG:eco:b3299 PATRIC:32122030 EchoBASE:EB1214
EcoGene:EG11232 BioCyc:EcoCyc:EG11232-MONOMER
BioCyc:ECOL316407:JW3261-MONOMER EvolutionaryTrace:P0A7Q6
Genevestigator:P0A7Q6 Uniprot:P0A7Q6
Length = 38
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 67 KYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQ 100
K +A VKK C+ C + ++GV+ +C +PKHKQ
Sbjct: 2 KVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQ 35
>UNIPROTKB|F1NQQ6 [details] [associations]
symbol:F1NQQ6 "Ribosomal protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 HAMAP:MF_00251 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 GeneTree:ENSGT00390000010866
EMBL:AADN02008187 EMBL:AADN02008186 IPI:IPI00590949
Ensembl:ENSGALT00000036982 Uniprot:F1NQQ6
Length = 141
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 67 KYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQ 100
K K +K+RCK CY + + G L+ C P+HKQ
Sbjct: 105 KTKTSIKRRCKDCYIVRRRGRLYVCCKTNPRHKQ 138
>ZFIN|ZDB-GENE-060503-821 [details] [associations]
symbol:mrpl36 "mitochondrial ribosomal protein L36"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000473
Pfam:PF00444 PROSITE:PS00828 ZFIN:ZDB-GENE-060503-821 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BX571830
PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
eggNOG:NOG129164 EMBL:BC142854 IPI:IPI00759011
RefSeq:NP_001092727.1 UniGene:Dr.74684 ProteinModelPortal:Q1LWG3
STRING:Q1LWG3 Ensembl:ENSDART00000103862 GeneID:100093703
KEGG:dre:100093703 CTD:64979 GeneTree:ENSGT00390000010866
HOGENOM:HOG000111586 InParanoid:Q1LWG3 OrthoDB:EOG4FN4KF
NextBio:20788633 Bgee:Q1LWG3 Uniprot:Q1LWG3
Length = 116
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 67 KYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQ 100
K K+ +KKRC C+F+ + G L C P+HKQ
Sbjct: 80 KTKSALKKRCNECFFVRRRGRLFVFCKAHPRHKQ 113
>TIGR_CMR|CPS_0622 [details] [associations]
symbol:CPS_0622 "ribosomal protein L36" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
KO:K02919 eggNOG:COG0257 HOGENOM:HOG000111584 RefSeq:YP_267372.1
ProteinModelPortal:Q488Z2 SMR:Q488Z2 STRING:Q488Z2 GeneID:3521373
KEGG:cps:CPS_0622 PATRIC:21464571 ProtClustDB:CLSK2768399
BioCyc:CPSY167879:GI48-709-MONOMER Uniprot:Q488Z2
Length = 37
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 67 KYKAKVKKRCKGCYFLYKEGVLHNLCHLKPKHKQ 100
K +A VKK C+ C + ++GV+ LC ++PKHKQ
Sbjct: 2 KVRASVKKICRNCKVVKRKGVIRVLC-VEPKHKQ 34
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 124 124 0.00091 102 3 11 22 0.49 30
29 0.39 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 587 (62 KB)
Total size of DFA: 143 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 14.26u 0.06s 14.32t Elapsed: 00:00:28
Total cpu time: 14.26u 0.06s 14.32t Elapsed: 00:00:29
Start: Thu Aug 15 13:27:17 2013 End: Thu Aug 15 13:27:46 2013