BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16816
(470 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2
SV=1
Length = 524
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 254/471 (53%), Gaps = 45/471 (9%)
Query: 23 QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
+R ALG +L+LVD++W SSE+ SY Q P F ++F+ L
Sbjct: 67 KRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVLYLL 116
Query: 83 LVSIKK--LQSASRGLHGK-VLFSGRSSG-----TESETENS-----MRKHVRFSKL-TE 128
+ K Q +RG GK F + G T T NS + V+F L +E
Sbjct: 117 GFIVWKPWRQQCTRGFRGKHATFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSE 176
Query: 129 RPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQS 177
+P+ + S +ME +R L A EA L+R+SY T++ +
Sbjct: 177 KPENTNIDTEKIPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSY-PTVKEQESLLKTV 233
Query: 178 TKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAFFPSSS 235
K QVAK++F F F+ F A +++ L + V ++ S+S + TL++ A FPS+S
Sbjct: 234 GKLTATQVAKISFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAMFPSNS 293
Query: 236 SDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LE 294
D+F+LSK + V +S+ G++LV +S GS SLV A+ Y++YIV ++R ++
Sbjct: 294 GDRFTLSKLLAVILSIGGVVLVNLSGSEKSPGRNTIGSIWSLVGAMLYAVYIVMIKRKVD 353
Query: 295 HEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTE 354
E+KLDI +F+GFVGL+N LLLWP FFLLHY +E F P++ + ++I GLIG+VL+E
Sbjct: 354 REDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIVINGLIGTVLSE 413
Query: 355 TLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA 414
LWLWG LTS LI TL L L +PLS+IA+ + V + LF+ GA+PV F+F + LL
Sbjct: 414 FLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIATLLC 473
Query: 415 QMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
+ DPV+ + + +K+ + DSEQ ESLI ++ QE
Sbjct: 474 HYNNWDPVMVGIRRIFAFICRK---HRIQKVPE-DSEQCESLIPMHGVSQE 520
>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2
SV=1
Length = 524
Score = 242 bits (617), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 253/475 (53%), Gaps = 45/475 (9%)
Query: 19 LSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFI 78
S+ +R ALG +L+LVD++W SSE+ SY Q P F ++F+
Sbjct: 63 FSQRRRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFV 112
Query: 79 QVFLLVSIKK--LQSASRGLHGK-VLFSGRSSG--TESETENSMRKH--------VRFSK 125
L I K Q +RG GK F + G T+ SM V+F
Sbjct: 113 LYLLGFIIWKPWRQQCTRGFRGKPAAFFADAEGYFAACTTDTSMSSSLSEPLYVPVKFHD 172
Query: 126 L-----------TER-PQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFT 173
L TE+ P+ V S +ME +R L A EA L+R+SY T++ +
Sbjct: 173 LPSEKLESTNIGTEKTPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSY-PTVKDQESI 229
Query: 174 FIQSTKYNIPQVAKVAFVFSFLRFGAE--YTFTLLGAEAGTVALIYSSSSVLTLLICAFF 231
K QVAK++F F F+ F A Y L + V ++ S+S + TL++ A F
Sbjct: 230 LKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVF 289
Query: 232 PSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLR 291
PS+S D+F+LSK + V +S+ G++LV +S GS SL A+FY++YIV ++
Sbjct: 290 PSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMFYAVYIVMIK 349
Query: 292 R-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGS 350
R ++ E+KLDI +F+GFVGL+N LLLWP FFLLHY +E F P++ + ++I GLIG+
Sbjct: 350 RKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLLCIIINGLIGT 409
Query: 351 VLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVAS 410
VL+E LWLWG LTS LI TL L L +PLS+IA+ + V + LF+ GA+PV F+F
Sbjct: 410 VLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIV 469
Query: 411 ILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
LL + DPV+ + + +++ + DSEQ ESLI+++ QE
Sbjct: 470 TLLCHYNNWDPVMVGVRRVFAFICRK---HRIQRVPE-DSEQCESLISMHSVSQE 520
>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2
SV=1
Length = 523
Score = 238 bits (607), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 254/478 (53%), Gaps = 46/478 (9%)
Query: 16 NVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHN 75
N ++ +R ALG +L+LVD++W SSE+ SY Q P F +
Sbjct: 60 NSGFTQRRRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTS 109
Query: 76 LFIQVFLLVSIKK--LQSASRGLHGK-VLFSGRSSG-----TESETENS-----MRKHVR 122
+F+ L I K Q +RGL GK F + G T T NS + V+
Sbjct: 110 MFVLYLLGFIIWKPWRQQCTRGLRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVPVK 169
Query: 123 FSKL-TERPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTA 170
F L +E+P+ + S +ME +R L A EA L+R+SY ++
Sbjct: 170 FHDLPSEKPESTNIDTEKTPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSY--PVKEQ 225
Query: 171 DFTFIQSTKYNIPQVAKVAFVFSFLRFGAE--YTFTLLGAEAGTVALIYSSSSVLTLLIC 228
+ K QVAK++F F F+ F A Y L + V ++ S+S + TL++
Sbjct: 226 ESILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILA 285
Query: 229 AFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIV 288
A FPS+S D+F+LSK + V +S+ G++LV ++ GS SL A+ Y++YIV
Sbjct: 286 AVFPSNSGDRFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIV 345
Query: 289 FLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGL 347
++R ++ E+KLDI +F+GFVGL+N LLLWP FFLLHY +E F P++ + ++I GL
Sbjct: 346 MIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIINGL 405
Query: 348 IGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAF 407
IG+VL+E LWLWG LTS LI TL L L +PLS+IA+ + V + LF+ GA+PV F+F
Sbjct: 406 IGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSF 465
Query: 408 VASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
LL + DPV+ + + +++ + DSEQ ESLI+++ QE
Sbjct: 466 FIVTLLCHYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQCESLISMHSVSQE 519
>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2
SV=1
Length = 523
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 258/483 (53%), Gaps = 56/483 (11%)
Query: 16 NVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHN 75
N ++ +R ALG +L+LVD++W SSE+ SY Q P F +
Sbjct: 60 NSGFTQRRRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTS 109
Query: 76 LFIQVFLLVSIKK--LQSASRGLHGK-VLFSGRSSG------TESETENSMRKH----VR 122
+F+ L I K Q +RGL GK F + G T++ +S+ + V+
Sbjct: 110 MFVLYLLGFIIWKPWRQQCTRGLRGKHAAFFADAEGYFAACATDTTMNSSLSEPLYVPVK 169
Query: 123 FSKL-TERPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSY-----QA 165
F L +E+P+ + S +ME +R L A E+ L+R+SY ++
Sbjct: 170 FHDLPSEKPESTNIDTEKTPKKSRVRFSNIME--IRQLPSNHALESKLSRMSYPVKEQES 227
Query: 166 TLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAE--YTFTLLGAEAGTVALIYSSSSVL 223
L+T K QVAK++F F F+ F A Y L + V ++ S+S +
Sbjct: 228 ILKTVG-------KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLF 280
Query: 224 TLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFY 283
TL++ A FPS+S D+F+LSK + V +S+ G++LV +S GS SL A+ Y
Sbjct: 281 TLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMLY 340
Query: 284 SLYIVFLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVIL 342
++YIV ++R ++ E+KLDI +F+GFVGL+N LLLWP FFLLHY +E F P++ + +
Sbjct: 341 AVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCI 400
Query: 343 LIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVP 402
+I GLIG+VL+E LWLWG LTS LI TL L L +PLS+IA+ + V + LF+ GA+P
Sbjct: 401 IINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIP 460
Query: 403 VVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMC 462
V F+F LL + DPV+ + + +++ + DSEQ ESLI+++
Sbjct: 461 VFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQCESLISMHSV 516
Query: 463 DQE 465
QE
Sbjct: 517 SQE 519
>sp|Q4R794|S35F5_MACFA Solute carrier family 35 member F5 OS=Macaca fascicularis
GN=SLC35F5 PE=2 SV=1
Length = 432
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 209/372 (56%), Gaps = 36/372 (9%)
Query: 103 SGRSSGTESETENSMRK-HVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARL 161
S + T +TE + +K VRFS + E +R L A EA L+R+
Sbjct: 84 SEKPESTNIDTEKTPKKSRVRFSNIME----------------IRQLPSSHALEAKLSRM 127
Query: 162 SY-----QATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAE--YTFTLLGAEAGTVA 214
SY ++ L+T K QVAK++F F F+ F A Y L + V
Sbjct: 128 SYPVKEQESILKTVG-------KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVN 180
Query: 215 LIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSF 274
++ S+S + TL++ A FPS+S D+F+LSK + V +S+ G++LV +S GS
Sbjct: 181 ILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRNTIGSI 240
Query: 275 LSLVSALFYSLYIVFLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSL 333
SL A+ Y++YIV ++R ++ E+KLDI +F+GFVGL+N LLLWP FFLLHY +E F
Sbjct: 241 WSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEF 300
Query: 334 PDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYP 393
P++ + ++I GLIG+VL+E LWLWG LTS LI TL L L +PLS+IA+ + V +
Sbjct: 301 PNKVVLMCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFS 360
Query: 394 RLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQR 453
LF+ GA+PV F+F LL + DPV+ + + +++ + DSEQ
Sbjct: 361 WLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQC 416
Query: 454 ESLININMCDQE 465
ESLI+++ QE
Sbjct: 417 ESLISMHSVSQE 428
>sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1
SV=1
Length = 393
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 181/406 (44%), Gaps = 75/406 (18%)
Query: 23 QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
+R LG +L LV ILW LSS ++ + ED+SY P + + FI +L
Sbjct: 11 KRWTLGLLMLGLVIILWVLSSFLINLI---FEDDSY-----RKPFFITYTNTAAFI-FYL 61
Query: 83 LVSIKKL-----QSASRGLHGKVLFSGRSSGTESETENSMRKHVRFSKLTERPQVLGVPA 137
+ K + + +H +++ +G++S M P + + A
Sbjct: 62 FPTAKAVVVNYKDTGRANVHRELIMEEEGTGSDSNRSVDMTS----------PLLTNLEA 111
Query: 138 SFLMEAPVRHLSDKEANEALLARLSYQATLR-TADFTFIQSTKYNIPQVAKVAFVFSFLR 196
H + K+ RL+ T++ +A+F + T N+ A +AF
Sbjct: 112 G-------THANQKK-------RLTLYETIKLSAEFCILWFTA-NLVTNASLAF------ 150
Query: 197 FGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLIL 256
+ ++ ++SS TL I A S K SK + IS G+I+
Sbjct: 151 -----------TSVASQTILSTTSSFFTLFIGAICHVESLSK---SKVLGSFISFVGIIM 196
Query: 257 VTISDV---YMEHL-----------HIPSGSFLSLVSALFYSLYIVFLRR-LEHEEKLDI 301
VT SD Y H+ + G+ L+L A+ Y +Y L+R + E ++++
Sbjct: 197 VTKSDSHQRYQRHIADVSGDDNDAVQVLIGNLLALAGAVLYGVYSTLLKREVGDETRVNM 256
Query: 302 VLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGM 361
+F+GFVGL+N L LWP +L + WE FSLP + V+++ + + +++ W M
Sbjct: 257 KIFFGFVGLFNLLFLWPSLIVLDFFGWEPFSLPKDPKVVVIIFVNCLITFVSDFCWAKAM 316
Query: 362 LLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAF 407
LLTSPL T+GL + +PL+M + H T L+ GA ++ +F
Sbjct: 317 LLTSPLTVTVGLSITIPLAMFGDVIFKHKTMSALYLFGATLILGSF 362
>sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1
Length = 341
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 23/251 (9%)
Query: 147 HLSDKEANE-ALLARLSYQATLRTADFTFIQSTKYNIP----QVAKVAFVFSFLRFGAEY 201
+ S+K+ + L++ LS ++ + F T+ N P Q A ++ F + F A Y
Sbjct: 61 YFSEKKTRKHRLMSELSMYESVHDSSFNL--GTRPNSPLGFRQTAYLSLGFCIIWFAANY 118
Query: 202 -TFTLLG-AEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTI 259
+ + LG + +I S S TL + + ++F+LSK + + SV G+I+V
Sbjct: 119 FSNSSLGFTNVASFTIISSMSGFFTLGLGTIV---NVERFTLSKLLALMASVGGVIIVVT 175
Query: 260 SDVYMEHLH--IPSGSFLSLVSALF-------YSLYIVFLRRLEHEEKLDIVLFYGFVGL 310
D L+ PS L AL YS+ + F + E + LF+G VGL
Sbjct: 176 QDAKQADLNDSPPSRPALGNAYALLAALLYGCYSVMVKF--HITEESCVSTRLFFGLVGL 233
Query: 311 YNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIAT 370
++ +LLWP +LH E FSLP +I+LI + +++ LW+ ML+TSPL+ T
Sbjct: 234 FDLILLWPFLIILHLYGVERFSLPSTTAGLIVLIINASITFVSDYLWVIAMLMTSPLLVT 293
Query: 371 LGLGLIVPLSM 381
+G+ L +PL++
Sbjct: 294 VGMSLSIPLAL 304
>sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transport protein THI74
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=THI74 PE=1 SV=1
Length = 370
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Query: 237 DKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFL-----SLVSALFYSLYIVFLR 291
+ FS K + + +S+ G+IL+ + + + + SFL +L+ +L YS+Y L+
Sbjct: 168 ETFSTKKLLGLFVSLFGIILIVMQSSKQQD-SVSASSFLVGNTLALLGSLGYSVYTTLLK 226
Query: 292 RLEHEE--KLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIG 349
+ +LDI +F G+VG++ LL WP+ +L E F LP L++ I
Sbjct: 227 YEISSKGLRLDIQMFLGYVGIFTFLLFWPILIILDITHMETFELPSNFHISFLVMLNCII 286
Query: 350 SVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVA 409
+++ W ++LTSPL+ T+ L +PL+M A+ + + +G V+F FV+
Sbjct: 287 IFVSDYFWCKALILTSPLVVTVALTFTIPLAMFADFVWREAFFTPWYIIG---VIFIFVS 343
Query: 410 SILL 413
L+
Sbjct: 344 FFLV 347
>sp|Q8IY50|S35F3_HUMAN Solute carrier family 35 member F3 OS=Homo sapiens GN=SLC35F3 PE=2
SV=2
Length = 421
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 237 DKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHE 296
D+F + V +++ G++++T +D + H H G L + SA +LY V + L
Sbjct: 201 DRFMGVRIVAAILAIAGIVMMTYADGF--HSHSVIGIALVVASASMSALYKVLFKLLLGS 258
Query: 297 EKL-DIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTET 355
K + LF +G++N L + + +L++ E +S D W L G +LT
Sbjct: 259 AKFGEAALFLSILGVFNILFITCIPIILYFTKVEYWSSFDDIPWGNLC--GFSVLLLTFN 316
Query: 356 LWL-WGMLLTSPLIATLGLGLIVPLSMI 382
+ L +G+ +T P + +LG+ L +P++ +
Sbjct: 317 IVLNFGIAVTYPTLMSLGIVLSIPVNAV 344
>sp|Q1LZI2|S35F3_MOUSE Solute carrier family 35 member F3 OS=Mus musculus GN=Slc35f3 PE=2
SV=1
Length = 421
Score = 39.3 bits (90), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 237 DKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHE 296
D+F + V +++ G++++T +D + H H G L + SA +LY V + L
Sbjct: 201 DRFMGVRIVAAILAIAGIVMMTYADGF--HSHSVIGIALVVGSASMSALYKVLFKLLLGS 258
Query: 297 EKL-DIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTET 355
K + LF +G++N L + + +L++ E ++ D W L G +LT
Sbjct: 259 AKFGEAALFLSILGVFNILFITCIPVILYFTRVEYWNSFDDIPWGNLC--GFSILLLTFN 316
Query: 356 LWL-WGMLLTSPLIATLGLGLIVPLSMIAN 384
+ L +G+ +T P + +LG+ L VP++ + +
Sbjct: 317 IVLNFGIAVTYPTLMSLGIVLSVPVNAVVD 346
>sp|Q99P77|NOG1_RAT Nucleolar GTP-binding protein 1 OS=Rattus norvegicus GN=Gtpbp4 PE=2
SV=3
Length = 637
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 413 LAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQEVDHEA 470
LA+ L+IL S + GP + RT+KK+ AD E + ++M D++ H A
Sbjct: 484 LAKQIREKKKLKILQSKEKNTQGPRMPRTAKKVQRADLENEMRSLGVDMDDKDNAHYA 541
>sp|Q99ME9|NOG1_MOUSE Nucleolar GTP-binding protein 1 OS=Mus musculus GN=Gtpbp4 PE=2 SV=3
Length = 634
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 413 LAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQEVDHEA 470
LA+ L+IL S + GP + RT+KK+ AD E + ++M D+ H A
Sbjct: 483 LAKQIREKKKLKILQSKEKNKQGPRMPRTAKKVQRADLENEMRSLGVDMDDKNNAHYA 540
>sp|P15010|RS19_HALSA 30S ribosomal protein S19 OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps19 PE=3 SV=2
Length = 140
Score = 34.7 bits (78), Expect = 1.8, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 83 LVSIKKLQSASRGL---HGKVLFSGRSSGTESETENSMRKHVR 122
L+ ++ ++ +RGL H KVL R SGTE N +R H+R
Sbjct: 34 LLPARQRRTITRGLSEEHHKVLAEARESGTEETANNPIRTHLR 76
>sp|B0R660|RS19_HALS3 30S ribosomal protein S19 OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps19 PE=3 SV=1
Length = 140
Score = 34.7 bits (78), Expect = 1.8, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 83 LVSIKKLQSASRGL---HGKVLFSGRSSGTESETENSMRKHVR 122
L+ ++ ++ +RGL H KVL R SGTE N +R H+R
Sbjct: 34 LLPARQRRTITRGLSEEHHKVLAEARESGTEETANNPIRTHLR 76
>sp|Q5DUY0|NU5H_NYCOV NADH-ubiquinone oxidoreductase chain 5 OS=Nyctotherus ovalis GN=nad5
PE=3 SV=1
Length = 1849
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 106 SSGTESETENS-MRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARL-SY 163
+ G T+ S ++K V +S +++ + A A + +L +ALL L Y
Sbjct: 1519 AYGAILATQTSDLKKAVAYSTISQIGYLFTGCAFLAFRATLIYLILHAICKALLFVLVGY 1578
Query: 164 QATL--RTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSS 221
+ T + Y +P +A F+ + GA YT E L +SS
Sbjct: 1579 IVHMFGGTTSLRRMGGIYYIVPDIAIYMFILCMVLAGAPYTVGFFAKELIVTTLTNTSSP 1638
Query: 222 VLTLLICAFFPSSSSDKFSLSK-CV 245
V T +IC + S + F L + CV
Sbjct: 1639 VATFIICCWIISFACTPFYLYRICV 1663
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,025,234
Number of Sequences: 539616
Number of extensions: 6537015
Number of successful extensions: 20277
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 20220
Number of HSP's gapped (non-prelim): 53
length of query: 470
length of database: 191,569,459
effective HSP length: 121
effective length of query: 349
effective length of database: 126,275,923
effective search space: 44070297127
effective search space used: 44070297127
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)