Query psy16819
Match_columns 289
No_of_seqs 295 out of 1340
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 22:53:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bpy_A FORK head domain, forkh 100.0 8.7E-38 3E-42 244.7 2.8 85 106-195 1-85 (85)
2 3coa_C Forkhead box protein O1 100.0 5.5E-38 1.9E-42 258.9 0.2 96 100-200 1-96 (117)
3 3l2c_A Forkhead box protein O4 100.0 1.6E-37 5.3E-42 253.8 2.8 96 99-199 13-108 (110)
4 1e17_A AFX; DNA binding domain 100.0 6.2E-37 2.1E-41 261.8 0.8 96 99-199 29-124 (150)
5 1vtn_C HNF-3/FORK head DNA-rec 100.0 5.8E-36 2E-40 241.6 1.8 87 108-202 1-87 (102)
6 2hdc_A Protein (transcription 100.0 5E-36 1.7E-40 240.0 1.2 87 109-203 1-87 (97)
7 1kq8_A HFH-1, hepatocyte nucle 100.0 1.2E-35 4.1E-40 239.0 2.6 86 109-202 1-87 (100)
8 2hfh_A Genesis, HFH-2; HNF-3 h 100.0 1.7E-35 5.7E-40 241.4 3.4 86 109-202 2-87 (109)
9 2c6y_A Forkhead box protein K2 100.0 2.8E-35 9.6E-40 240.8 2.9 90 106-203 12-101 (111)
10 2a07_F Forkhead box protein P2 100.0 1.8E-33 6.1E-38 223.7 0.2 79 109-200 2-80 (93)
11 3g73_A Forkhead box protein M1 100.0 5.4E-31 1.8E-35 223.7 1.5 86 105-200 13-98 (142)
12 3bpy_A FORK head domain, forkh 99.9 1.1E-24 3.7E-29 170.5 2.0 60 229-288 1-60 (85)
13 3l2c_A Forkhead box protein O4 99.9 3.6E-24 1.2E-28 174.8 2.0 67 222-288 13-79 (110)
14 3coa_C Forkhead box protein O1 99.9 3.1E-24 1.1E-28 176.9 -1.2 64 225-288 3-66 (117)
15 1e17_A AFX; DNA binding domain 99.9 7.8E-24 2.7E-28 180.9 -0.7 69 220-288 27-95 (150)
16 1kq8_A HFH-1, hepatocyte nucle 99.8 4.2E-22 1.4E-26 160.1 1.5 52 232-288 1-52 (100)
17 2hdc_A Protein (transcription 99.8 3.6E-22 1.2E-26 159.7 0.7 52 232-288 1-52 (97)
18 1vtn_C HNF-3/FORK head DNA-rec 99.8 3.6E-22 1.2E-26 161.1 0.6 53 231-288 1-53 (102)
19 2hfh_A Genesis, HFH-2; HNF-3 h 99.8 7.8E-22 2.7E-26 160.8 2.0 52 232-288 2-53 (109)
20 2c6y_A Forkhead box protein K2 99.8 8.6E-22 2.9E-26 161.0 0.7 55 229-288 12-66 (111)
21 2a07_F Forkhead box protein P2 99.8 6.7E-22 2.3E-26 157.0 -1.1 52 232-288 2-53 (93)
22 3g73_A Forkhead box protein M1 99.8 3.8E-20 1.3E-24 157.0 1.3 56 228-288 13-69 (142)
23 1uss_A Histone H1; DNA binding 85.3 0.86 2.9E-05 34.9 4.1 32 114-145 9-41 (88)
24 1uhm_A Histone H1, histone HHO 83.1 0.74 2.5E-05 34.4 2.8 33 114-146 6-39 (78)
25 1hst_A Histone H5; chromosomal 82.6 1.1 3.7E-05 34.6 3.6 33 113-145 8-41 (90)
26 1ust_A Histone H1; DNA binding 79.2 1.2 4.1E-05 34.5 2.9 33 113-145 8-41 (93)
27 2rqp_A Heterochromatin protein 77.1 1.5 5.3E-05 33.4 2.8 35 113-147 10-45 (88)
28 1uss_A Histone H1; DNA binding 70.9 3.4 0.00012 31.5 3.4 33 237-269 9-42 (88)
29 1uhm_A Histone H1, histone HHO 70.6 3.2 0.00011 30.9 3.1 33 237-269 6-39 (78)
30 1hst_A Histone H5; chromosomal 66.4 4.5 0.00015 31.1 3.3 32 237-268 9-41 (90)
31 4aw0_A HPDK1, 3-phosphoinositi 63.6 2.1 7E-05 39.5 1.0 39 115-161 261-301 (311)
32 1ust_A Histone H1; DNA binding 62.1 4.6 0.00016 31.2 2.6 34 236-269 8-42 (93)
33 2lso_A Histone H1X; structural 64.4 1.9 6.3E-05 32.8 0.0 34 112-145 5-39 (83)
34 2rqp_A Heterochromatin protein 54.2 3.6 0.00012 31.3 0.7 34 236-269 10-44 (88)
35 1ghc_A GH1; chromosomal protei 43.6 3.7 0.00013 30.0 -0.7 30 114-143 5-35 (75)
36 3hyh_A Carbon catabolite-derep 43.2 12 0.00041 33.5 2.5 33 114-146 238-272 (275)
37 4hgt_A Casein kinase I isoform 30.5 46 0.0016 28.0 4.1 35 112-146 247-281 (296)
38 4aw0_A HPDK1, 3-phosphoinositi 28.6 20 0.00069 32.8 1.5 35 238-273 261-297 (311)
39 1ufn_A Putative nuclear protei 26.4 13 0.00045 29.1 -0.1 13 155-167 63-75 (94)
40 3uzp_A CKI-delta, CKID, casein 25.5 64 0.0022 27.1 4.1 34 112-145 247-280 (296)
41 1h5p_A Nuclear autoantigen SP1 24.2 15 0.00052 28.8 -0.2 13 155-167 58-70 (95)
42 1u46_A ACK-1, activated CDC42 24.0 43 0.0015 28.1 2.7 33 113-145 252-284 (291)
43 2eue_A Carbon catabolite derep 23.4 36 0.0012 28.6 2.1 35 113-147 237-273 (275)
44 1ob3_A PFPK5, cell division co 23.4 43 0.0015 28.5 2.6 32 114-150 256-287 (288)
45 3dtc_A Mitogen-activated prote 23.3 42 0.0014 28.0 2.5 30 113-142 241-270 (271)
46 2h6d_A 5'-AMP-activated protei 23.2 57 0.002 27.2 3.3 33 113-145 236-270 (276)
47 2kzv_A Uncharacterized protein 23.2 1.1E+02 0.0037 23.3 4.6 40 112-151 6-47 (92)
48 2eva_A TAK1 kinase - TAB1 chim 23.1 50 0.0017 28.6 3.0 39 113-151 231-269 (307)
49 1csn_A Casein kinase-1; phosph 22.4 85 0.0029 26.4 4.3 37 112-148 250-286 (298)
50 2wqm_A Serine/threonine-protei 22.3 49 0.0017 28.3 2.7 31 114-144 266-296 (310)
51 1q8y_A SR protein kinase; tran 22.2 40 0.0014 29.6 2.2 31 115-150 310-340 (373)
52 3kmu_A ILK, integrin-linked ki 21.6 53 0.0018 27.1 2.7 32 112-143 237-268 (271)
53 3s95_A LIMK-1, LIM domain kina 21.3 58 0.002 27.9 3.0 33 112-144 249-281 (310)
54 2kpm_A Uncharacterized protein 21.1 75 0.0026 25.1 3.3 38 114-151 21-60 (105)
55 3kvw_A DYRK2, dual specificity 20.9 30 0.001 32.1 1.2 31 115-150 385-415 (429)
56 3kfa_A Tyrosine-protein kinase 20.9 55 0.0019 27.5 2.7 32 113-144 239-270 (288)
57 3q4u_A Activin receptor type-1 20.5 52 0.0018 27.8 2.5 28 115-142 272-299 (301)
58 4euu_A Serine/threonine-protei 20.4 62 0.0021 27.9 3.0 29 115-143 279-307 (319)
No 1
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=244.73 Aligned_cols=85 Identities=56% Similarity=0.968 Sum_probs=81.6
Q ss_pred CCCCCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCC
Q psy16819 106 RRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPTS 185 (289)
Q Consensus 106 ~~~~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~~~~~~~ 185 (289)
+||+||+|||++||++||+++|+++|||+|||+||+++||||+.++|+++..|||||||||| |+|+||+|+++. .
T Consensus 1 ~rn~kp~~SY~~LI~~Ai~~sp~~~ltL~eIY~~i~~~fpyy~~~~~~~s~~gWqNSIRHNL---Sln~~F~Kv~r~--~ 75 (85)
T 3bpy_A 1 RRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNL---SLHSKFIKVHNE--A 75 (85)
T ss_dssp CCBTTBSCCHHHHHHHHHHHSTTSCBCHHHHHHHHHHHCGGGTTCTTCCTTSHHHHHHHHHH---HHCTTEEEECCC--S
T ss_pred CCCCcCCCCHHHHHHHHHHhCCcCCccHHHHHHHHHHhCcchhcCccCccCCCcchhhhhhc---cHhhhheeCCCC--C
Confidence 58999999999999999999999999999999999999999999999888999999999999 999999999984 6
Q ss_pred CCCccccccc
Q psy16819 186 AKLEDFETLG 195 (289)
Q Consensus 186 ~g~g~~w~v~ 195 (289)
+|+|+||+|+
T Consensus 76 ~GKg~~W~ld 85 (85)
T 3bpy_A 76 TGKSSWWMLN 85 (85)
T ss_dssp TTCCCEEEEC
T ss_pred CCCCCceecC
Confidence 8999999986
No 2
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=100.00 E-value=5.5e-38 Score=258.90 Aligned_cols=96 Identities=53% Similarity=0.858 Sum_probs=82.9
Q ss_pred cccCCCCCCCCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCC
Q psy16819 100 KKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDE 179 (289)
Q Consensus 100 ~~~~~~~~~~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~ 179 (289)
.||++++++.||+|||++||++||+++|+++|||+|||+||+++||||++++|+++..|||||||||| |+|+||+|+
T Consensus 1 ~~~~~s~~n~kPp~SYa~LI~~AI~~sp~~~LTL~eIY~~I~~~fPyyr~~~d~~s~~gWqNSIRHNL---Sln~~F~Kv 77 (117)
T 3coa_C 1 SKSSSSRRNAWGNLSYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRHNL---SLHSKFIRV 77 (117)
T ss_dssp ------CCBTTBSCCHHHHHHHHHHTSTTSCBCHHHHHHHHHHHCGGGTTCCSHHHHHHHHHHHHHHH---HHCTTEEEE
T ss_pred CCcccCCCCCCCCCCHHHHHHHHHHhCCCCCccHHHHHHHHHHhCcccccCCCCcccccchhccchhe---ecchhhccc
Confidence 37889999999999999999999999999999999999999999999999988777899999999999 999999999
Q ss_pred CCCCCCCCCcccccccchhHh
Q psy16819 180 PSPPTSAKLEDFETLGGELSA 200 (289)
Q Consensus 180 ~~~~~~~g~g~~w~v~ge~sa 200 (289)
++ +.+|+|+||+|+++...
T Consensus 78 ~~--~~~GKg~~W~l~p~~~~ 96 (117)
T 3coa_C 78 QN--EGTGKSSWWMLNPEGGK 96 (117)
T ss_dssp CC--SSTTCCCEEEECC----
T ss_pred cc--CCCCCcceEEECccccc
Confidence 97 46899999999998653
No 3
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=100.00 E-value=1.6e-37 Score=253.80 Aligned_cols=96 Identities=52% Similarity=0.849 Sum_probs=82.5
Q ss_pred ccccCCCCCCCCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCC
Q psy16819 99 LKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVD 178 (289)
Q Consensus 99 ~~~~~~~~~~~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k 178 (289)
.+++.++++++||+|||++||++||+++|+++|||+|||+||+++||||+.++|+++..|||||||||| |+|+||+|
T Consensus 13 ~~~~~~~~~~~kPpySY~~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~~~~~~s~~gWqNSIRHNL---Sln~~F~K 89 (110)
T 3l2c_A 13 GPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNL---SLHSKFIK 89 (110)
T ss_dssp -------CCBTTBSCCHHHHHHHHHHHSTTSCBCHHHHHHHHHHHCGGGTTCTTCCTTSHHHHHHHHHH---HHCTTEEE
T ss_pred CCCCCccCCCCCCCCCHHHHHHHHHHhCCccCcCHHHHHHHHHHhCchhhcCccccCCCCcccchhhhc---cHhhhhee
Confidence 378888999999999999999999999999999999999999999999999999888999999999999 99999999
Q ss_pred CCCCCCCCCCcccccccchhH
Q psy16819 179 EPSPPTSAKLEDFETLGGELS 199 (289)
Q Consensus 179 ~~~~~~~~g~g~~w~v~ge~s 199 (289)
+++. .+|+|+||+|+++..
T Consensus 90 v~r~--~~GKG~~W~l~p~~~ 108 (110)
T 3l2c_A 90 VHNE--ATGKSSWWMLNPEGG 108 (110)
T ss_dssp ECCC--STTCCCEEEEC----
T ss_pred CCCC--CCCCCceEEECcccc
Confidence 9984 689999999999753
No 4
>1e17_A AFX; DNA binding domain, winged helix; NMR {Homo sapiens} SCOP: a.4.5.14
Probab=100.00 E-value=6.2e-37 Score=261.78 Aligned_cols=96 Identities=52% Similarity=0.850 Sum_probs=86.4
Q ss_pred ccccCCCCCCCCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCC
Q psy16819 99 LKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVD 178 (289)
Q Consensus 99 ~~~~~~~~~~~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k 178 (289)
..+++++++|.||+|||++||++||+++|+++|||+|||+||+++||||++++|+++..|||||||||| |+|+||+|
T Consensus 29 ~~~~~~~~rn~kPp~SYa~LI~~AI~sSp~k~LTL~eIY~wI~~~fPYfr~~~d~~s~~gWqNSIRHNL---SLnk~F~K 105 (150)
T 1e17_A 29 GPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNL---SLHSKFIK 105 (150)
T ss_dssp ------CCCCTTCSCCHHHHHHHHHHHSSSCCEEHHHHHHHHHHHCGGGHHHHTSTTHHHHHHHHHHHH---HSSTTEEE
T ss_pred CCccCCCCCCCCCCCCHHHHHHHHHHhCCCCCccHHHHHHHHHHhCchhccCCCCccccchhhccceee---eeeeeeEe
Confidence 478899999999999999999999999999999999999999999999999998888999999999999 99999999
Q ss_pred CCCCCCCCCCcccccccchhH
Q psy16819 179 EPSPPTSAKLEDFETLGGELS 199 (289)
Q Consensus 179 ~~~~~~~~g~g~~w~v~ge~s 199 (289)
+++ +.+|+|+||+|+++..
T Consensus 106 v~r--~~~GKG~~W~ldp~~~ 124 (150)
T 1e17_A 106 VHN--EATGKSSWWMLNPEGG 124 (150)
T ss_dssp ECC--TTTSSSCEEEECTTCC
T ss_pred cCC--CCCCCcceEEECcccc
Confidence 998 5789999999999753
No 5
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A
Probab=100.00 E-value=5.8e-36 Score=241.61 Aligned_cols=87 Identities=29% Similarity=0.534 Sum_probs=82.8
Q ss_pred CCCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCCCC
Q psy16819 108 NAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPTSAK 187 (289)
Q Consensus 108 ~~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~~~~~~~~g 187 (289)
+.||||||++||++||+++|+++|||+|||+||+++||||+.+. .|||||||||| |+|+||+|+++.++++|
T Consensus 1 h~KPp~SY~~LI~~AI~~sp~~~LtL~eIY~~I~~~fpyyr~~~-----~gWqNSIRHNL---Sln~~F~kv~r~~~~~G 72 (102)
T 1vtn_C 1 HAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQ-----QRWQNSIRHSL---SFNDCFVKVARSPDKPG 72 (102)
T ss_dssp CCCCSSCHHHHHHHHHHTSTTSCBCHHHHHHHHHHHCGGGGSCH-----HHHHHHHHHHH---HHCTTEEEECCCSCSSC
T ss_pred CcCcCCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHcCCccccCC-----Cchhhhhhhhh---hhccceEecCCCCCCCC
Confidence 57999999999999999999999999999999999999999876 89999999999 99999999999999999
Q ss_pred CcccccccchhHhhh
Q psy16819 188 LEDFETLGGELSALL 202 (289)
Q Consensus 188 ~g~~w~v~ge~sal~ 202 (289)
+|+||+|+++....|
T Consensus 73 KG~~W~l~p~~~~~f 87 (102)
T 1vtn_C 73 KGSYWALHPSSGNMF 87 (102)
T ss_dssp SSCEEEECGGGCSTT
T ss_pred CcceEEECcCHHHHh
Confidence 999999999876655
No 6
>2hdc_A Protein (transcription factor); structure, dyanamics, genesis, winged helix protein, protein/DNA complex; HET: DNA; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=100.00 E-value=5e-36 Score=240.02 Aligned_cols=87 Identities=30% Similarity=0.513 Sum_probs=83.6
Q ss_pred CCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCCCCC
Q psy16819 109 AWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPTSAKL 188 (289)
Q Consensus 109 ~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~~~~~~~~g~ 188 (289)
.||||||++||++||+++|+++|||+|||+||+++||||+.+. .|||||||||| |+|+||+|+++..+++|+
T Consensus 1 ~KPp~SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~fpyyr~~~-----~gWqNSIRHNL---Sln~~F~Kv~r~~~~~gK 72 (97)
T 2hdc_A 1 VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKF-----PAWQNSIRHNL---SLNDCFVKIPREPGNPGK 72 (97)
T ss_dssp CCCCCCHHHHHHHHHHTCTTTCBCHHHHHHHHHHHCHHHHHHC-----SSHHHHHHHHH---HHHHCCEEECSCTTCSSS
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHhchhhccCC-----cceehhhhhhh---hhhhheeecCCCCCCCCC
Confidence 4899999999999999999999999999999999999999987 89999999999 999999999999999999
Q ss_pred cccccccchhHhhhh
Q psy16819 189 EDFETLGGELSALLS 203 (289)
Q Consensus 189 g~~w~v~ge~sal~S 203 (289)
|+||+|+++....|.
T Consensus 73 g~~W~l~p~~~~~f~ 87 (97)
T 2hdc_A 73 GNYWTLDPQSEDMFD 87 (97)
T ss_dssp CCEEECCTTHHHHHH
T ss_pred cceEEECcCHHHHHh
Confidence 999999999988773
No 7
>1kq8_A HFH-1, hepatocyte nuclear factor 3 forkhead homolog 1, winged; winged helix protein, structure, transcription; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=100.00 E-value=1.2e-35 Score=238.95 Aligned_cols=86 Identities=26% Similarity=0.461 Sum_probs=72.1
Q ss_pred CCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCCC-C
Q psy16819 109 AWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPTSA-K 187 (289)
Q Consensus 109 ~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~~~~~~~~-g 187 (289)
+||||||++||++||+++|+++|||+|||+||+++||||+.+. .|||||||||| |+|+||+|+++..+++ |
T Consensus 1 ~KPp~SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~fpyyr~~~-----~gWqNSIRHNL---Sln~~F~kv~r~~~~p~g 72 (100)
T 1kq8_A 1 PKPPYSYIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSY-----TGWRNSVRHNL---SLNDCFVKVLRDPSRPWG 72 (100)
T ss_dssp ------CHHHHHHHHTTSSSSCBCHHHHHHHHHHHCTTGGGTC-----SCCHHHHHHHH---HHHTCCEECSSCSCCSSS
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHhCccccCCC-----Cceecccchhe---ehhheeeecCCCCCCCCC
Confidence 4899999999999999999999999999999999999999976 89999999999 9999999999998888 9
Q ss_pred CcccccccchhHhhh
Q psy16819 188 LEDFETLGGELSALL 202 (289)
Q Consensus 188 ~g~~w~v~ge~sal~ 202 (289)
+|+||+|+++...+|
T Consensus 73 kg~~W~l~p~~~~~f 87 (100)
T 1kq8_A 73 KDNYWMLNPNSEYTF 87 (100)
T ss_dssp CCCCEECCC------
T ss_pred CCeEEEECcCHHHHH
Confidence 999999999987766
No 8
>2hfh_A Genesis, HFH-2; HNF-3 homologues, winged helix protein; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=100.00 E-value=1.7e-35 Score=241.39 Aligned_cols=86 Identities=30% Similarity=0.517 Sum_probs=82.9
Q ss_pred CCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCCCCC
Q psy16819 109 AWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPTSAKL 188 (289)
Q Consensus 109 ~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~~~~~~~~g~ 188 (289)
.||||||++||++||+++|+++|||+|||+||+++||||+.++ .|||||||||| |+|+||+|+++..+++|+
T Consensus 2 ~KPp~SYa~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~~~-----~gWqNSIRHNL---Sln~~F~Kv~r~~~~~GK 73 (109)
T 2hfh_A 2 VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKF-----PAWQNSIRHNL---SLNDCFVKIPREPGNPGK 73 (109)
T ss_dssp CCCCCCHHHHHHHHHHTCSSSCBCHHHHHHHHHTTCHHHHTTC-----GGGHHHHHHHH---HHHTCCBCCTTCTTSCSS
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHhcchhccCC-----cccchhhhhhh---hhhhhhhcCCCCCCCCCC
Confidence 5899999999999999999999999999999999999999987 89999999999 999999999999999999
Q ss_pred cccccccchhHhhh
Q psy16819 189 EDFETLGGELSALL 202 (289)
Q Consensus 189 g~~w~v~ge~sal~ 202 (289)
|+||+|+++....|
T Consensus 74 G~~W~l~p~~~~~f 87 (109)
T 2hfh_A 74 GNYWTLDPQSEDMF 87 (109)
T ss_dssp CCCBBCCTTCCHHH
T ss_pred ceeEEECccHHHHH
Confidence 99999999988776
No 9
>2c6y_A Forkhead box protein K2; transcription regulation, DNA-binding domain, forkhead transcription factors, interleukin enhancer binding factor; 2.4A {Homo sapiens} SCOP: a.4.5.14 PDB: 1jxs_A 2a3s_A 2d2w_A
Probab=100.00 E-value=2.8e-35 Score=240.80 Aligned_cols=90 Identities=28% Similarity=0.478 Sum_probs=84.1
Q ss_pred CCCCCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCC
Q psy16819 106 RRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPTS 185 (289)
Q Consensus 106 ~~~~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~~~~~~~ 185 (289)
....||||||++||++||+++|+++|||+|||+||+++||||+.+. .|||||||||| |+|+||+|+++..++
T Consensus 12 ~~~~KPp~SYa~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~~~-----~gWqNSIRHNL---Sln~~F~Kv~r~~~~ 83 (111)
T 2c6y_A 12 GSDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTAD-----KGWQNSIRHNL---SLNRYFIKVPRSQEE 83 (111)
T ss_dssp --CCCCSSCHHHHHHHHHHTSTTSCEEHHHHHHHHHHHCTTSCTTC-----HHHHHHHHHHH---HHSTTEEEECCCTTS
T ss_pred CCCCCCCCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHcCCccccCC-----CeeecchhHHh---hhhhhhccccCCCCC
Confidence 3568999999999999999999999999999999999999999876 89999999999 999999999999999
Q ss_pred CCCcccccccchhHhhhh
Q psy16819 186 AKLEDFETLGGELSALLS 203 (289)
Q Consensus 186 ~g~g~~w~v~ge~sal~S 203 (289)
+|+|+||+|+++....|.
T Consensus 84 ~GKG~~W~l~p~~~~~~~ 101 (111)
T 2c6y_A 84 PGKGSFWRIDPASESKLI 101 (111)
T ss_dssp CCSSCEEEECHHHHHHHH
T ss_pred CCCcceEEeChhHHHhhh
Confidence 999999999999887763
No 10
>2a07_F Forkhead box protein P2; double-helix, swapping, homodimer, monomer, winged-helix, magnesium, transcription/DNA complex; 1.90A {Homo sapiens} SCOP: a.4.5.14 PDB: 2as5_F 2kiu_A 3qrf_F
Probab=99.97 E-value=1.8e-33 Score=223.66 Aligned_cols=79 Identities=29% Similarity=0.458 Sum_probs=73.9
Q ss_pred CCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCCCCC
Q psy16819 109 AWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPTSAKL 188 (289)
Q Consensus 109 ~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~~~~~~~~g~ 188 (289)
.||+|||++||++||+++|+++|||+|||+||+++||||+.+. .|||||||||| |+|+||+|+++ |+
T Consensus 2 ~KPp~SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~fpyyr~~~-----~gWkNSIRHNL---Sln~~F~kv~~-----gk 68 (93)
T 2a07_F 2 VRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNA-----ATWKNAVRHNL---SLHKCFVRVEN-----VK 68 (93)
T ss_dssp CCCSCCHHHHHHHHHHHSTTSCBCHHHHHHHHHHHHHHHCCCH-----HHHHHHHHHHH---HHCTTBCCEEC-----SS
T ss_pred CCCCCCHHHHHHHHHHhCCCCCccHHHHHHHHHHhCCccccCC-----Cccccccceee---ehhhceeecCC-----CC
Confidence 4899999999999999999999999999999999999999876 89999999999 99999999973 79
Q ss_pred cccccccchhHh
Q psy16819 189 EDFETLGGELSA 200 (289)
Q Consensus 189 g~~w~v~ge~sa 200 (289)
|+||+|+++...
T Consensus 69 G~~W~l~~~~~~ 80 (93)
T 2a07_F 69 GAVWTVDEVEYQ 80 (93)
T ss_dssp SEECCBCHHHHH
T ss_pred CCeeEEChHHhh
Confidence 999999997544
No 11
>3g73_A Forkhead box protein M1; DNA-binding domain, forkhead transcription factors, FOXM1, W helix; HET: DNA; 2.21A {Homo sapiens}
Probab=99.96 E-value=5.4e-31 Score=223.67 Aligned_cols=86 Identities=31% Similarity=0.522 Sum_probs=77.2
Q ss_pred CCCCCCCCCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCC
Q psy16819 105 SRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPT 184 (289)
Q Consensus 105 ~~~~~kP~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ds~s~~gWknSIRHNL~~~s~~~~F~k~~~~~~ 184 (289)
.....||+|||++||++||+++|+++|||+|||+||+++||||+.+. ..|||||||||| |+|+||+|+ .+
T Consensus 13 ~~~~~KPpySYa~LI~~AI~~sp~~~LTL~eIY~~I~~~fPyyr~~~----~~gWqNSIRHNL---Sln~~F~r~---~~ 82 (142)
T 3g73_A 13 NSVSERPPYSYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIA----KPGWKNSIRHNL---SLHDMFVRE---TS 82 (142)
T ss_dssp -CTTSCCSSCHHHHHHHHHHTSTTSEECHHHHHHHHHHHCTHHHHTS----CTTHHHHHHHHH---HHCTTEEEE---EC
T ss_pred ccCCCCCCCCHHHHHHHHHHhCCCCCcCHHHHHHHHHHhCCCccccC----CCCccchhhhhh---hhhhhheec---CC
Confidence 45677899999999999999999999999999999999999999832 289999999999 999999975 45
Q ss_pred CCCCcccccccchhHh
Q psy16819 185 SAKLEDFETLGGELSA 200 (289)
Q Consensus 185 ~~g~g~~w~v~ge~sa 200 (289)
.+|+|+||+|+++...
T Consensus 83 ~~GKg~~W~i~p~~~~ 98 (142)
T 3g73_A 83 ANGKVSFWTIHPSANR 98 (142)
T ss_dssp TTSCCEEEEECTTTCC
T ss_pred CCCCCceEEECccccc
Confidence 6799999999998753
No 12
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=99.89 E-value=1.1e-24 Score=170.48 Aligned_cols=60 Identities=73% Similarity=1.255 Sum_probs=57.7
Q ss_pred cCCCCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 229 RRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 229 rr~~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
+|++||+|||++||+|||++||+++|||+|||+||+++|||||.++|+++++|||||||+
T Consensus 1 ~rn~kp~~SY~~LI~~Ai~~sp~~~ltL~eIY~~i~~~fpyy~~~~~~~s~~gWqNSIRH 60 (85)
T 3bpy_A 1 RRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRH 60 (85)
T ss_dssp CCBTTBSCCHHHHHHHHHHHSTTSCBCHHHHHHHHHHHCGGGTTCTTCCTTSHHHHHHHH
T ss_pred CCCCcCCCCHHHHHHHHHHhCCcCCccHHHHHHHHHHhCcchhcCccCccCCCcchhhhh
Confidence 588999999999999999999999999999999999999999999888888999999997
No 13
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=99.88 E-value=3.6e-24 Score=174.82 Aligned_cols=67 Identities=67% Similarity=1.122 Sum_probs=58.0
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 222 LKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 222 ~k~~~~srr~~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
..+...++++.||+|||++||+|||+++|+++|||+|||+||+++|||||.++|++++.|||||||+
T Consensus 13 ~~~~~~~~~~~kPpySY~~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~~~~~~s~~gWqNSIRH 79 (110)
T 3l2c_A 13 GPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRH 79 (110)
T ss_dssp -------CCBTTBSCCHHHHHHHHHHHSTTSCBCHHHHHHHHHHHCGGGTTCTTCCTTSHHHHHHHH
T ss_pred CCCCCccCCCCCCCCCHHHHHHHHHHhCCccCcCHHHHHHHHHHhCchhhcCccccCCCCcccchhh
Confidence 3456678899999999999999999999999999999999999999999999887788999999997
No 14
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=99.87 E-value=3.1e-24 Score=176.86 Aligned_cols=64 Identities=70% Similarity=1.174 Sum_probs=57.1
Q ss_pred cccccCCCCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 225 TATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 225 ~~~srr~~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
+.+++++.||+|||++||+|||+++|+++|||+|||+||+++||||++++|+++..||||||||
T Consensus 3 ~~~s~~n~kPp~SYa~LI~~AI~~sp~~~LTL~eIY~~I~~~fPyyr~~~d~~s~~gWqNSIRH 66 (117)
T 3coa_C 3 SSSSRRNAWGNLSYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRH 66 (117)
T ss_dssp ----CCBTTBSCCHHHHHHHHHHTSTTSCBCHHHHHHHHHHHCGGGTTCCSHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCCHHHHHHHHHHhCCCCCccHHHHHHHHHHhCcccccCCCCcccccchhccch
Confidence 4668899999999999999999999999999999999999999999998766667899999997
No 15
>1e17_A AFX; DNA binding domain, winged helix; NMR {Homo sapiens} SCOP: a.4.5.14
Probab=99.86 E-value=7.8e-24 Score=180.92 Aligned_cols=69 Identities=65% Similarity=1.101 Sum_probs=59.0
Q ss_pred ccccccccccCCCCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 220 LALKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 220 ~~~k~~~~srr~~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
....+.+.++++.||+|||++||+|||+++|+++|||+|||+||+++|||||+++|++++.|||||||+
T Consensus 27 ~~~~~~~~~~rn~kPp~SYa~LI~~AI~sSp~k~LTL~eIY~wI~~~fPYfr~~~d~~s~~gWqNSIRH 95 (150)
T 1e17_A 27 VTGPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRH 95 (150)
T ss_dssp --------CCCCTTCSCCHHHHHHHHHHHSSSCCEEHHHHHHHHHHHCGGGHHHHTSTTHHHHHHHHHH
T ss_pred CCCCccCCCCCCCCCCCCHHHHHHHHHHhCCCCCccHHHHHHHHHHhCchhccCCCCccccchhhccce
Confidence 344456778999999999999999999999999999999999999999999998888888999999996
No 16
>1kq8_A HFH-1, hepatocyte nuclear factor 3 forkhead homolog 1, winged; winged helix protein, structure, transcription; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=99.83 E-value=4.2e-22 Score=160.10 Aligned_cols=52 Identities=31% Similarity=0.581 Sum_probs=44.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 232 AWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 232 ~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
+||+|||++||+|||++||+++|||+|||+||+++|||||.+. .||||||||
T Consensus 1 ~KPp~SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~fpyyr~~~-----~gWqNSIRH 52 (100)
T 1kq8_A 1 PKPPYSYIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSY-----TGWRNSVRH 52 (100)
T ss_dssp ------CHHHHHHHHTTSSSSCBCHHHHHHHHHHHCTTGGGTC-----SCCHHHHHH
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHhCccccCCC-----Cceecccch
Confidence 4899999999999999999999999999999999999999965 899999997
No 17
>2hdc_A Protein (transcription factor); structure, dyanamics, genesis, winged helix protein, protein/DNA complex; HET: DNA; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=99.83 E-value=3.6e-22 Score=159.68 Aligned_cols=52 Identities=33% Similarity=0.577 Sum_probs=50.1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 232 AWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 232 ~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
.||+|||++||+|||++||+++|||+|||+||+++|||||.++ .||||||||
T Consensus 1 ~KPp~SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~fpyyr~~~-----~gWqNSIRH 52 (97)
T 2hdc_A 1 VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKF-----PAWQNSIRH 52 (97)
T ss_dssp CCCCCCHHHHHHHHHHTCTTTCBCHHHHHHHHHHHCHHHHHHC-----SSHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHhchhhccCC-----cceehhhhh
Confidence 4899999999999999999999999999999999999999976 899999997
No 18
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A
Probab=99.83 E-value=3.6e-22 Score=161.05 Aligned_cols=53 Identities=36% Similarity=0.700 Sum_probs=50.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 231 NAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 231 ~~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
+.||+|||++||+|||++||+++|||+|||+||+++||||+.+. .|||||||+
T Consensus 1 h~KPp~SY~~LI~~AI~~sp~~~LtL~eIY~~I~~~fpyyr~~~-----~gWqNSIRH 53 (102)
T 1vtn_C 1 HAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQ-----QRWQNSIRH 53 (102)
T ss_dssp CCCCSSCHHHHHHHHHHTSTTSCBCHHHHHHHHHHHCGGGGSCH-----HHHHHHHHH
T ss_pred CcCcCCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHcCCccccCC-----Cchhhhhhh
Confidence 46999999999999999999999999999999999999999875 899999997
No 19
>2hfh_A Genesis, HFH-2; HNF-3 homologues, winged helix protein; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=99.83 E-value=7.8e-22 Score=160.76 Aligned_cols=52 Identities=33% Similarity=0.577 Sum_probs=50.1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 232 AWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 232 ~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
.||+|||++||+|||++||+++|||+|||+||+++|||||.++ .|||||||+
T Consensus 2 ~KPp~SYa~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~~~-----~gWqNSIRH 53 (109)
T 2hfh_A 2 VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKF-----PAWQNSIRH 53 (109)
T ss_dssp CCCCCCHHHHHHHHHHTCSSSCBCHHHHHHHHHTTCHHHHTTC-----GGGHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHhcchhccCC-----cccchhhhh
Confidence 5999999999999999999999999999999999999999976 899999996
No 20
>2c6y_A Forkhead box protein K2; transcription regulation, DNA-binding domain, forkhead transcription factors, interleukin enhancer binding factor; 2.4A {Homo sapiens} SCOP: a.4.5.14 PDB: 1jxs_A 2a3s_A 2d2w_A
Probab=99.82 E-value=8.6e-22 Score=161.00 Aligned_cols=55 Identities=35% Similarity=0.636 Sum_probs=50.9
Q ss_pred cCCCCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 229 RRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 229 rr~~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
....||+|||++||++||++||+++|||+|||+||+++|||||++. .||||||||
T Consensus 12 ~~~~KPp~SYa~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~~~-----~gWqNSIRH 66 (111)
T 2c6y_A 12 GSDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTAD-----KGWQNSIRH 66 (111)
T ss_dssp --CCCCSSCHHHHHHHHHHTSTTSCEEHHHHHHHHHHHCTTSCTTC-----HHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHcCCccccCC-----CeeecchhH
Confidence 4567999999999999999999999999999999999999999865 899999997
No 21
>2a07_F Forkhead box protein P2; double-helix, swapping, homodimer, monomer, winged-helix, magnesium, transcription/DNA complex; 1.90A {Homo sapiens} SCOP: a.4.5.14 PDB: 2as5_F 2kiu_A 3qrf_F
Probab=99.81 E-value=6.7e-22 Score=157.05 Aligned_cols=52 Identities=37% Similarity=0.682 Sum_probs=50.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCcccccCCCCCCCCCCCCCccC
Q psy16819 232 AWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKFFKKF 288 (289)
Q Consensus 232 ~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~~~d~~~~~gWkNSIR~ 288 (289)
.||+|||++||+|||++||+++|||+|||+||+++|||||.+. .||||||||
T Consensus 2 ~KPp~SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~fpyyr~~~-----~gWkNSIRH 53 (93)
T 2a07_F 2 VRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNA-----ATWKNAVRH 53 (93)
T ss_dssp CCCSCCHHHHHHHHHHHSTTSCBCHHHHHHHHHHHHHHHCCCH-----HHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCCCCccHHHHHHHHHHhCCccccCC-----Cccccccce
Confidence 5899999999999999999999999999999999999999865 899999997
No 22
>3g73_A Forkhead box protein M1; DNA-binding domain, forkhead transcription factors, FOXM1, W helix; HET: DNA; 2.21A {Homo sapiens}
Probab=99.77 E-value=3.8e-20 Score=157.05 Aligned_cols=56 Identities=34% Similarity=0.637 Sum_probs=51.7
Q ss_pred ccCCCCCCCCHHHHHHHHHHcCCCCcccHHHHHHHHhcCCccccc-CCCCCCCCCCCCCccC
Q psy16819 228 SRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKD-KGDSNSSAGWKFFKKF 288 (289)
Q Consensus 228 srr~~KP~~SYa~LI~~AI~sSP~~rLTL~eIY~~i~~~~pyfr~-~~d~~~~~gWkNSIR~ 288 (289)
.....||+|||++||+|||+++|+++|||+|||+||+++|||||. +. .||||||||
T Consensus 13 ~~~~~KPpySYa~LI~~AI~~sp~~~LTL~eIY~~I~~~fPyyr~~~~-----~gWqNSIRH 69 (142)
T 3g73_A 13 NSVSERPPYSYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAK-----PGWKNSIRH 69 (142)
T ss_dssp -CTTSCCSSCHHHHHHHHHHTSTTSEECHHHHHHHHHHHCTHHHHTSC-----TTHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHhCCCCCcCHHHHHHHHHHhCCCccccCC-----CCccchhhh
Confidence 445679999999999999999999999999999999999999998 44 899999997
No 23
>1uss_A Histone H1; DNA binding protein, linker histone, DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13 PDB: 1yqa_A
Probab=85.28 E-value=0.86 Score=34.94 Aligned_cols=32 Identities=6% Similarity=0.207 Sum_probs=28.4
Q ss_pred cHHHHHHHHHhcCCCC-CcCHHHHHHHHHhcCC
Q psy16819 114 SYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVP 145 (289)
Q Consensus 114 SYa~LI~~AI~ssp~~-~LTL~eIY~wi~~~~p 145 (289)
+|.+||..||....++ -.+++-|..||+.+|+
T Consensus 9 ~y~~MI~eAI~alker~GsS~~AIkKyI~~~y~ 41 (88)
T 1uss_A 9 TYKEMILKSMPQLNDGKGSSRIVLKKYVKDTFS 41 (88)
T ss_dssp CHHHHHHHHHHHSCCTTSBCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhccCCCcCHHHHHHHHHHhCC
Confidence 7999999999986665 4999999999999965
No 24
>1uhm_A Histone H1, histone HHO1P; winged helix-turn-helix, linker histone, riken structural genomics/proteomics initiative, RSGI; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13
Probab=83.07 E-value=0.74 Score=34.40 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=28.5
Q ss_pred cHHHHHHHHHhcCCCC-CcCHHHHHHHHHhcCCc
Q psy16819 114 SYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVPY 146 (289)
Q Consensus 114 SYa~LI~~AI~ssp~~-~LTL~eIY~wi~~~~py 146 (289)
+|.+||..||....++ -.+++-|-.||+.+|+.
T Consensus 6 ~y~~MI~eAI~~lker~GsS~~AIkKyI~~~y~~ 39 (78)
T 1uhm_A 6 SYRELIIEGLTALKERKGSSRPALKKFIKENYPI 39 (78)
T ss_dssp CHHHHHHHHHHHHCCSSCEEHHHHHHHHHTTSCT
T ss_pred CHHHHHHHHHHHhccCCCcCHHHHHHHHHHHCCC
Confidence 8999999999885554 48999999999999763
No 25
>1hst_A Histone H5; chromosomal protein; 2.60A {Gallus gallus} SCOP: a.4.5.13
Probab=82.55 E-value=1.1 Score=34.59 Aligned_cols=33 Identities=15% Similarity=0.356 Sum_probs=28.8
Q ss_pred CcHHHHHHHHHhcCCCC-CcCHHHHHHHHHhcCC
Q psy16819 113 SSYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVP 145 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~-~LTL~eIY~wi~~~~p 145 (289)
-+|.+||..||....++ -.+++-|-.||+.+|+
T Consensus 8 P~y~~MI~eAI~~lker~GsS~~AI~KyI~~~y~ 41 (90)
T 1hst_A 8 PTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYK 41 (90)
T ss_dssp CCHHHHHHHHHHTCCCSSCEEHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHhccCCCCCHHHHHHHHHHHcc
Confidence 38999999999997665 4899999999999966
No 26
>1ust_A Histone H1; DNA binding protein, linker histone, DNA binding domain, winged helix fold; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13
Probab=79.22 E-value=1.2 Score=34.54 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=28.7
Q ss_pred CcHHHHHHHHHhcCCCC-CcCHHHHHHHHHhcCC
Q psy16819 113 SSYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVP 145 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~-~LTL~eIY~wi~~~~p 145 (289)
-+|.+||..||....++ -.+++-|-.||..+|+
T Consensus 8 P~y~~MI~eAI~alker~GsS~~AIkKyI~~~y~ 41 (93)
T 1ust_A 8 KSYRELIIEGLTALKERKGSSRPALKKFIKENYP 41 (93)
T ss_dssp CCHHHHHHHHHTTTTTTSCEEHHHHHHHHHHHCH
T ss_pred CCHHHHHHHHHHHcccCCCcCHHHHHHHHHHHCC
Confidence 38999999999986655 4899999999999965
No 27
>2rqp_A Heterochromatin protein 1-binding protein 3; histone H1, alternative splicing, chromosomal protein, DNA-binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=77.06 E-value=1.5 Score=33.36 Aligned_cols=35 Identities=14% Similarity=0.371 Sum_probs=29.2
Q ss_pred CcHHHHHHHHHhcCCCC-CcCHHHHHHHHHhcCCcc
Q psy16819 113 SSYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVPYF 147 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~-~LTL~eIY~wi~~~~pyf 147 (289)
-+|.+||..||....++ -.+++-|..||+.+|+-+
T Consensus 10 p~y~~MI~eAI~~Lker~GsS~~AI~KyI~~~y~~~ 45 (88)
T 2rqp_A 10 PKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSL 45 (88)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHCSTH
T ss_pred CCHHHHHHHHHHHhccCCCcCHHHHHHHHHHhCCCC
Confidence 47999999999875443 489999999999998843
No 28
>1uss_A Histone H1; DNA binding protein, linker histone, DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13 PDB: 1yqa_A
Probab=70.94 E-value=3.4 Score=31.53 Aligned_cols=33 Identities=6% Similarity=0.182 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHcCCCC-cccHHHHHHHHhcCCcc
Q psy16819 237 SYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVPY 269 (289)
Q Consensus 237 SYa~LI~~AI~sSP~~-rLTL~eIY~~i~~~~py 269 (289)
+|..||..||...-++ -.++.-|..||..+|..
T Consensus 9 ~y~~MI~eAI~alker~GsS~~AIkKyI~~~y~~ 42 (88)
T 1uss_A 9 TYKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSS 42 (88)
T ss_dssp CHHHHHHHHHHHSCCTTSBCHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHhccCCCcCHHHHHHHHHHhCCC
Confidence 7999999999998776 57899999999999753
No 29
>1uhm_A Histone H1, histone HHO1P; winged helix-turn-helix, linker histone, riken structural genomics/proteomics initiative, RSGI; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13
Probab=70.60 E-value=3.2 Score=30.86 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHcCCCC-cccHHHHHHHHhcCCcc
Q psy16819 237 SYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVPY 269 (289)
Q Consensus 237 SYa~LI~~AI~sSP~~-rLTL~eIY~~i~~~~py 269 (289)
+|..||..||...-++ -.++..|-.||..+|+.
T Consensus 6 ~y~~MI~eAI~~lker~GsS~~AIkKyI~~~y~~ 39 (78)
T 1uhm_A 6 SYRELIIEGLTALKERKGSSRPALKKFIKENYPI 39 (78)
T ss_dssp CHHHHHHHHHHHHCCSSCEEHHHHHHHHHTTSCT
T ss_pred CHHHHHHHHHHHhccCCCcCHHHHHHHHHHHCCC
Confidence 7999999999987666 47799999999999764
No 30
>1hst_A Histone H5; chromosomal protein; 2.60A {Gallus gallus} SCOP: a.4.5.13
Probab=66.39 E-value=4.5 Score=31.09 Aligned_cols=32 Identities=16% Similarity=0.363 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHcCCCC-cccHHHHHHHHhcCCc
Q psy16819 237 SYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVP 268 (289)
Q Consensus 237 SYa~LI~~AI~sSP~~-rLTL~eIY~~i~~~~p 268 (289)
+|..||..||...-++ -.++..|-.||..+|.
T Consensus 9 ~y~~MI~eAI~~lker~GsS~~AI~KyI~~~y~ 41 (90)
T 1hst_A 9 TYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYK 41 (90)
T ss_dssp CHHHHHHHHHHTCCCSSCEEHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHhccCCCCCHHHHHHHHHHHcc
Confidence 7999999999998776 4779999999999976
No 31
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=63.64 E-value=2.1 Score=39.52 Aligned_cols=39 Identities=21% Similarity=0.510 Sum_probs=32.8
Q ss_pred HHHHHHHHHhcCCCCCcCHHHH--HHHHHhcCCccccCCCCCCCCCccc
Q psy16819 115 YADLISQAIQSSPEQRLTLSQI--YDWMIQNVPYFKDKGDSNSSAGWKM 161 (289)
Q Consensus 115 Ya~LI~~AI~ssp~~~LTL~eI--Y~wi~~~~pyf~~~~ds~s~~gWkn 161 (289)
-.+||...|.-.|.+|+|..|+ +.||.+| |||+. -.|++
T Consensus 261 ~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H-p~F~~-------idw~~ 301 (311)
T 4aw0_A 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAH-PFFES-------VTWEN 301 (311)
T ss_dssp HHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS-GGGTT-------CCCTT
T ss_pred HHHHHHHHccCCHhHCcChHHHcCCHHHHCC-CCcCC-------CCHHH
Confidence 5689999999999999999998 6777654 99987 46864
No 32
>1ust_A Histone H1; DNA binding protein, linker histone, DNA binding domain, winged helix fold; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13
Probab=62.12 E-value=4.6 Score=31.20 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHcCCCC-cccHHHHHHHHhcCCcc
Q psy16819 236 SSYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVPY 269 (289)
Q Consensus 236 ~SYa~LI~~AI~sSP~~-rLTL~eIY~~i~~~~py 269 (289)
-+|..||..||...-++ -.++.-|-.||..+|..
T Consensus 8 P~y~~MI~eAI~alker~GsS~~AIkKyI~~~y~~ 42 (93)
T 1ust_A 8 KSYRELIIEGLTALKERKGSSRPALKKFIKENYPI 42 (93)
T ss_dssp CCHHHHHHHHHTTTTTTSCEEHHHHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHHcccCCCcCHHHHHHHHHHHCCC
Confidence 37999999999997776 57789999999999764
No 33
>2lso_A Histone H1X; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, nuclear protein; NMR {Homo sapiens}
Probab=64.44 E-value=1.9 Score=32.76 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=28.4
Q ss_pred CCcHHHHHHHHHhcCCCC-CcCHHHHHHHHHhcCC
Q psy16819 112 SSSYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVP 145 (289)
Q Consensus 112 ~~SYa~LI~~AI~ssp~~-~LTL~eIY~wi~~~~p 145 (289)
|-+|.+||..||....++ --+++-|..+|+.++.
T Consensus 5 ~~~y~~MI~eAI~aLker~GSS~~AI~K~i~~~~~ 39 (83)
T 2lso_A 5 PGKYSQLVVETIRRLGERNGSSLAKIYTEAKKVPW 39 (83)
Confidence 448999999999886555 3889999999999874
No 34
>2rqp_A Heterochromatin protein 1-binding protein 3; histone H1, alternative splicing, chromosomal protein, DNA-binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=54.19 E-value=3.6 Score=31.28 Aligned_cols=34 Identities=15% Similarity=0.362 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHcCCCC-cccHHHHHHHHhcCCcc
Q psy16819 236 SSYADLISQAIQSSPEQ-RLTLSQIYDWMIQNVPY 269 (289)
Q Consensus 236 ~SYa~LI~~AI~sSP~~-rLTL~eIY~~i~~~~py 269 (289)
-+|..||..||....++ -.++..|..||..+|+-
T Consensus 10 p~y~~MI~eAI~~Lker~GsS~~AI~KyI~~~y~~ 44 (88)
T 2rqp_A 10 PKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPS 44 (88)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHCST
T ss_pred CCHHHHHHHHHHHhccCCCcCHHHHHHHHHHhCCC
Confidence 37999999999886544 46788899999999873
No 35
>1ghc_A GH1; chromosomal protein; NMR {Gallus gallus} SCOP: a.4.5.13
Probab=43.56 E-value=3.7 Score=30.03 Aligned_cols=30 Identities=27% Similarity=0.424 Sum_probs=26.1
Q ss_pred cHHHHHHHHHhcCCCC-CcCHHHHHHHHHhc
Q psy16819 114 SYADLISQAIQSSPEQ-RLTLSQIYDWMIQN 143 (289)
Q Consensus 114 SYa~LI~~AI~ssp~~-~LTL~eIY~wi~~~ 143 (289)
+|.+||..||....++ -.+++-|..||+.+
T Consensus 5 ~y~~mI~~AI~alker~GsS~~AI~Kyi~~~ 35 (75)
T 1ghc_A 5 SVTELITKAVSASKERKGLSLAALKKALAAG 35 (75)
T ss_dssp SHHHHHHHHHHHCSSSSCCTTSSGGGSSSSS
T ss_pred CHHHHHHHHHHHhccCCcccHHHHHHHHHHc
Confidence 7999999999987554 48899999999998
No 36
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=43.17 E-value=12 Score=33.53 Aligned_cols=33 Identities=24% Similarity=0.556 Sum_probs=27.7
Q ss_pred cHHHHHHHHHhcCCCCCcCHHHHHH--HHHhcCCc
Q psy16819 114 SYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPY 146 (289)
Q Consensus 114 SYa~LI~~AI~ssp~~~LTL~eIY~--wi~~~~py 146 (289)
...+||..++.-.|++|+|..||.+ ||...+|-
T Consensus 238 ~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p~ 272 (275)
T 3hyh_A 238 GAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPE 272 (275)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCCG
T ss_pred HHHHHHHHHccCChhHCcCHHHHHcCcccccCCCh
Confidence 4678999999999999999999986 66666653
No 37
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=30.50 E-value=46 Score=27.95 Aligned_cols=35 Identities=9% Similarity=0.035 Sum_probs=30.7
Q ss_pred CCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCc
Q psy16819 112 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPY 146 (289)
Q Consensus 112 ~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~py 146 (289)
+-....||..++...|++|.|..||.+.+.+-+.-
T Consensus 247 ~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 247 PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 44689999999999999999999999999876543
No 38
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=28.58 E-value=20 Score=32.82 Aligned_cols=35 Identities=20% Similarity=0.406 Sum_probs=28.9
Q ss_pred HHHHHHHHHHcCCCCcccHHHH--HHHHhcCCcccccC
Q psy16819 238 YADLISQAIQSSPEQRLTLSQI--YDWMIQNVPYFKDK 273 (289)
Q Consensus 238 Ya~LI~~AI~sSP~~rLTL~eI--Y~~i~~~~pyfr~~ 273 (289)
-.+||...+.--|.+|+|..|+ +.||.+ -|||+.-
T Consensus 261 ~~dli~~lL~~dp~~R~t~~e~~~~~~i~~-Hp~F~~i 297 (311)
T 4aw0_A 261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKA-HPFFESV 297 (311)
T ss_dssp HHHHHHHHSCSSGGGSTTSGGGTCHHHHHT-SGGGTTC
T ss_pred HHHHHHHHccCCHhHCcChHHHcCCHHHHC-CCCcCCC
Confidence 4578999999999999999997 567765 5999874
No 39
>1ufn_A Putative nuclear protein homolog 5830484A20RIK; SAND domain, KDWK motif, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.217.1.1
Probab=26.45 E-value=13 Score=29.11 Aligned_cols=13 Identities=46% Similarity=0.687 Sum_probs=11.3
Q ss_pred CCCCccccccccc
Q psy16819 155 SSAGWKMRIRSNT 167 (289)
Q Consensus 155 s~~gWknSIRHNL 167 (289)
+++.||-|||||=
T Consensus 63 ~sKdWKrSIr~~G 75 (94)
T 1ufn_A 63 TSKDWKGVIRCNG 75 (94)
T ss_dssp TCSCHHHHCEETT
T ss_pred cccCcceeeEECC
Confidence 4689999999985
No 40
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=25.52 E-value=64 Score=27.13 Aligned_cols=34 Identities=9% Similarity=0.053 Sum_probs=29.8
Q ss_pred CCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCC
Q psy16819 112 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVP 145 (289)
Q Consensus 112 ~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~p 145 (289)
+-.+..||..++...|++|.|..||.+.+.+-+.
T Consensus 247 ~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 247 PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 3458899999999999999999999999887644
No 41
>1h5p_A Nuclear autoantigen SP100-B; transcription, DNA binding, SAND domain, KDWK, nuclear protein, alternative splicing; NMR {Homo sapiens} SCOP: d.217.1.1
Probab=24.19 E-value=15 Score=28.81 Aligned_cols=13 Identities=38% Similarity=0.805 Sum_probs=11.3
Q ss_pred CCCCccccccccc
Q psy16819 155 SSAGWKMRIRSNT 167 (289)
Q Consensus 155 s~~gWknSIRHNL 167 (289)
+++.||-|||||=
T Consensus 58 ~sKdWKrSIR~~G 70 (95)
T 1h5p_A 58 ASKNWKLSIRCGG 70 (95)
T ss_dssp TTCCHHHHCEETT
T ss_pred cCcCcceeeEECC
Confidence 4689999999985
No 42
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=24.02 E-value=43 Score=28.13 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=28.7
Q ss_pred CcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCC
Q psy16819 113 SSYADLISQAIQSSPEQRLTLSQIYDWMIQNVP 145 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~p 145 (289)
-....||..++.-.|.+|.|+.+|.+++.+..+
T Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 252 QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 457899999999999999999999999987644
No 43
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=23.44 E-value=36 Score=28.62 Aligned_cols=35 Identities=26% Similarity=0.613 Sum_probs=27.9
Q ss_pred CcHHHHHHHHHhcCCCCCcCHHHHH--HHHHhcCCcc
Q psy16819 113 SSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVPYF 147 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~~LTL~eIY--~wi~~~~pyf 147 (289)
-....||..++.-.|.+|.|+.||. .|+...+|-|
T Consensus 237 ~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~~~~~ 273 (275)
T 2eue_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEY 273 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTTCCGG
T ss_pred HHHHHHHHHHhhcCHhHCCCHHHHhhCCeecccchhh
Confidence 3468899999999999999999995 4666665543
No 44
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=23.35 E-value=43 Score=28.50 Aligned_cols=32 Identities=38% Similarity=0.616 Sum_probs=26.5
Q ss_pred cHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccC
Q psy16819 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDK 150 (289)
Q Consensus 114 SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~ 150 (289)
....||..++.-.|.+|.|..||.+ .|||+..
T Consensus 256 ~~~~li~~~L~~dP~~Rpt~~e~l~-----hp~f~~~ 287 (288)
T 1ob3_A 256 SGIDLLSKMLKLDPNQRITAKQALE-----HAYFKEN 287 (288)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHT-----SGGGGC-
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhc-----Ccchhhc
Confidence 4568999999999999999999874 5788753
No 45
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=23.28 E-value=42 Score=27.95 Aligned_cols=30 Identities=20% Similarity=0.457 Sum_probs=26.9
Q ss_pred CcHHHHHHHHHhcCCCCCcCHHHHHHHHHh
Q psy16819 113 SSYADLISQAIQSSPEQRLTLSQIYDWMIQ 142 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~ 142 (289)
-....||..++...|.+|.|+.||.+.+.+
T Consensus 241 ~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 241 EPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 458899999999999999999999998863
No 46
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=23.19 E-value=57 Score=27.19 Aligned_cols=33 Identities=33% Similarity=0.639 Sum_probs=26.9
Q ss_pred CcHHHHHHHHHhcCCCCCcCHHHHHH--HHHhcCC
Q psy16819 113 SSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~~LTL~eIY~--wi~~~~p 145 (289)
-....||..++.-.|.+|.|+.||.+ |+.+.+|
T Consensus 236 ~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 236 RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 45788999999999999999999986 4555444
No 47
>2kzv_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; NMR {Chromobacterium violaceum}
Probab=23.18 E-value=1.1e+02 Score=23.34 Aligned_cols=40 Identities=20% Similarity=0.373 Sum_probs=32.9
Q ss_pred CCcHHHHHHHHHhc--CCCCCcCHHHHHHHHHhcCCccccCC
Q psy16819 112 SSSYADLISQAIQS--SPEQRLTLSQIYDWMIQNVPYFKDKG 151 (289)
Q Consensus 112 ~~SYa~LI~~AI~s--sp~~~LTL~eIY~wi~~~~pyf~~~~ 151 (289)
+-.-..||..||.. ..++-..|++|-++|.+.+|=|....
T Consensus 6 d~~l~~ll~~Ai~~~~dedGWa~Lg~vG~~i~k~~PdFD~Rn 47 (92)
T 2kzv_A 6 KHPLQDMFTSAIEAVARDSGWAELSAVGSYLAKNDPSFDPRN 47 (92)
T ss_dssp CSSHHHHHHHHHHHHTTTTSSCBHHHHHHHHHHHCTTCCTTT
T ss_pred hHHHHHHHHHHHHHhcCCCCcEeHHHHHHHHHHhCcCCCccc
Confidence 34567899999976 44677999999999999999998654
No 48
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=23.10 E-value=50 Score=28.59 Aligned_cols=39 Identities=21% Similarity=0.399 Sum_probs=34.6
Q ss_pred CcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccCC
Q psy16819 113 SSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKG 151 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~~ 151 (289)
-....||..++...|.+|.|..||.+.+..-..+|....
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 269 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence 457899999999999999999999999999888887654
No 49
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=22.36 E-value=85 Score=26.38 Aligned_cols=37 Identities=3% Similarity=0.015 Sum_probs=31.1
Q ss_pred CCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccc
Q psy16819 112 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFK 148 (289)
Q Consensus 112 ~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~ 148 (289)
+-....||..++...|..|.|..+|++.+.+-+.-..
T Consensus 250 ~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 250 PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 3468899999999999999999999999987655333
No 50
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=22.28 E-value=49 Score=28.31 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=27.9
Q ss_pred cHHHHHHHHHhcCCCCCcCHHHHHHHHHhcC
Q psy16819 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNV 144 (289)
Q Consensus 114 SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~ 144 (289)
....||..++...|.+|.|+.||++.+.+-.
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999987653
No 51
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=22.21 E-value=40 Score=29.59 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccC
Q psy16819 115 YADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDK 150 (289)
Q Consensus 115 Ya~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~ 150 (289)
...||..++.-.|.+|.|+.||.+ .|||+..
T Consensus 310 ~~~li~~~L~~dP~~Rpt~~ell~-----hp~f~~~ 340 (373)
T 1q8y_A 310 ISDFLSPMLQLDPRKRADAGGLVN-----HPWLKDT 340 (373)
T ss_dssp HHHHHGGGGCSSTTTCBCHHHHHT-----CGGGTTC
T ss_pred HHHHHHHHhccCccccCCHHHHhh-----Chhhhcc
Confidence 457899999999999999999875 4777654
No 52
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=21.63 E-value=53 Score=27.10 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=27.8
Q ss_pred CCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhc
Q psy16819 112 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQN 143 (289)
Q Consensus 112 ~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~ 143 (289)
+-....||..++.-.|++|.|+.||.+.+.+-
T Consensus 237 ~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 237 SPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 34578999999999999999999999988753
No 53
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=21.29 E-value=58 Score=27.90 Aligned_cols=33 Identities=15% Similarity=0.359 Sum_probs=29.1
Q ss_pred CCcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcC
Q psy16819 112 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQNV 144 (289)
Q Consensus 112 ~~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~ 144 (289)
+-....||..++...|++|.|..||.+++..-.
T Consensus 249 ~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 249 PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 346899999999999999999999999987653
No 54
>2kpm_A Uncharacterized protein; methods development, structural genomics, PSI-2, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=21.07 E-value=75 Score=25.05 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=31.6
Q ss_pred cHHHHHHHHHhcCC--CCCcCHHHHHHHHHhcCCccccCC
Q psy16819 114 SYADLISQAIQSSP--EQRLTLSQIYDWMIQNVPYFKDKG 151 (289)
Q Consensus 114 SYa~LI~~AI~ssp--~~~LTL~eIY~wi~~~~pyf~~~~ 151 (289)
.-..||..||.... ++-..|++|-.+|.+.+|=|....
T Consensus 21 ~l~~lL~~Ai~~~~dddGWa~Lg~vG~~L~k~~PdFDpRn 60 (105)
T 2kpm_A 21 FPRKFVLAALEQSSDDAGWANLGNFGNYLNKLQPDFDSRL 60 (105)
T ss_dssp CCHHHHHHHHHHTBCTTSCEEHHHHHHHHHHHCTTCCGGG
T ss_pred HHHHHHHHHHHHhcCCcCcEeHHHHHHHHHHhCcCCCccc
Confidence 34689999997744 667999999999999999998643
No 55
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=20.90 E-value=30 Score=32.06 Aligned_cols=31 Identities=23% Similarity=0.549 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCCCCcCHHHHHHHHHhcCCccccC
Q psy16819 115 YADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDK 150 (289)
Q Consensus 115 Ya~LI~~AI~ssp~~~LTL~eIY~wi~~~~pyf~~~ 150 (289)
+.+||..++.-.|.+|+|..||.+ -|||+..
T Consensus 385 ~~dli~~~L~~dP~~Rpta~e~L~-----Hpw~~~~ 415 (429)
T 3kvw_A 385 FLDFLKQCLEWDPAVRMTPGQALR-----HPWLRRR 415 (429)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHT-----STTTC--
T ss_pred HHHHHHHHCCCChhhCCCHHHHhC-----ChhhccC
Confidence 679999999999999999999875 4777754
No 56
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=20.85 E-value=55 Score=27.48 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=28.2
Q ss_pred CcHHHHHHHHHhcCCCCCcCHHHHHHHHHhcC
Q psy16819 113 SSYADLISQAIQSSPEQRLTLSQIYDWMIQNV 144 (289)
Q Consensus 113 ~SYa~LI~~AI~ssp~~~LTL~eIY~wi~~~~ 144 (289)
-....||..++.-.|.+|.|..||.+.+..-+
T Consensus 239 ~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 35789999999999999999999999987653
No 57
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=20.49 E-value=52 Score=27.79 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=25.6
Q ss_pred HHHHHHHHHhcCCCCCcCHHHHHHHHHh
Q psy16819 115 YADLISQAIQSSPEQRLTLSQIYDWMIQ 142 (289)
Q Consensus 115 Ya~LI~~AI~ssp~~~LTL~eIY~wi~~ 142 (289)
...||..++...|.+|.|..||.+.+.+
T Consensus 272 l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 272 LAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 7789999999999999999999998764
No 58
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=20.38 E-value=62 Score=27.90 Aligned_cols=29 Identities=7% Similarity=0.173 Sum_probs=26.1
Q ss_pred HHHHHHHHHhcCCCCCcCHHHHHHHHHhc
Q psy16819 115 YADLISQAIQSSPEQRLTLSQIYDWMIQN 143 (289)
Q Consensus 115 Ya~LI~~AI~ssp~~~LTL~eIY~wi~~~ 143 (289)
...||..++...|++|+|..||++...+.
T Consensus 279 l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 279 LTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 56788999999999999999999998876
Done!