RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16819
(289 letters)
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal
rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB:
3co7_C* 2k86_A 2uzk_A
Length = 117
Score = 107 bits (269), Expect = 1e-29
Identities = 49/66 (74%), Positives = 61/66 (92%)
Query: 101 KTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 160
K+++SRRNAWG+ SYADLI++AI+SS E+RLTLSQIY+WM+++VPYFKDKGDSNSSAGWK
Sbjct: 2 KSSSSRRNAWGNLSYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWK 61
Query: 161 MRIRSN 166
IR N
Sbjct: 62 NSIRHN 67
Score = 102 bits (255), Expect = 1e-27
Identities = 46/60 (76%), Positives = 58/60 (96%)
Query: 224 KTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
K+++SRRNAWG+ SYADLI++AI+SS E+RLTLSQIY+WM+++VPYFKDKGDSNSSAGWK
Sbjct: 2 KSSSSRRNAWGNLSYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWK 61
>1e17_A AFX; DNA binding domain, winged helix; NMR {Homo sapiens} SCOP:
a.4.5.14
Length = 150
Score = 104 bits (261), Expect = 5e-28
Identities = 50/80 (62%), Positives = 61/80 (76%)
Query: 87 GLLNCPTAGGLALKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPY 146
G G + + SRRNAWG+ SYA+LISQAI+S+PE+RLTL+QIY+WM++ VPY
Sbjct: 17 GSHMLEDPGAVTGPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPY 76
Query: 147 FKDKGDSNSSAGWKMRIRSN 166
FKDKGDSNSSAGWK IR N
Sbjct: 77 FKDKGDSNSSAGWKNSIRHN 96
Score = 99.7 bits (248), Expect = 3e-26
Identities = 47/74 (63%), Positives = 58/74 (78%)
Query: 210 GLLNCPTAGGLALKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPY 269
G G + + SRRNAWG+ SYA+LISQAI+S+PE+RLTL+QIY+WM++ VPY
Sbjct: 17 GSHMLEDPGAVTGPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPY 76
Query: 270 FKDKGDSNSSAGWK 283
FKDKGDSNSSAGWK
Sbjct: 77 FKDKGDSNSSAGWK 90
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP;
1.87A {Homo sapiens} PDB: 3co6_C*
Length = 110
Score = 102 bits (256), Expect = 1e-27
Identities = 50/80 (62%), Positives = 61/80 (76%)
Query: 87 GLLNCPTAGGLALKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPY 146
G G + + SRRNAWG+ SYA+LISQAI+S+PE+RLTL+QIY+WM++ VPY
Sbjct: 1 GSHMLEDPGAVTGPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPY 60
Query: 147 FKDKGDSNSSAGWKMRIRSN 166
FKDKGDSNSSAGWK IR N
Sbjct: 61 FKDKGDSNSSAGWKNSIRHN 80
Score = 98.7 bits (246), Expect = 3e-26
Identities = 47/74 (63%), Positives = 58/74 (78%)
Query: 210 GLLNCPTAGGLALKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPY 269
G G + + SRRNAWG+ SYA+LISQAI+S+PE+RLTL+QIY+WM++ VPY
Sbjct: 1 GSHMLEDPGAVTGPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPY 60
Query: 270 FKDKGDSNSSAGWK 283
FKDKGDSNSSAGWK
Sbjct: 61 FKDKGDSNSSAGWK 74
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding
domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
SCOP: a.4.5.14
Length = 85
Score = 99.7 bits (249), Expect = 5e-27
Identities = 47/61 (77%), Positives = 56/61 (91%)
Query: 106 RRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRS 165
RRNAWG+ SYA+LISQAI+S+PE+RLTL+QIY+WM++ VPYFKDKGDSNSSAGWK IR
Sbjct: 1 RRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRH 60
Query: 166 N 166
N
Sbjct: 61 N 61
Score = 95.8 bits (239), Expect = 2e-25
Identities = 44/55 (80%), Positives = 53/55 (96%)
Query: 229 RRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
RRNAWG+ SYA+LISQAI+S+PE+RLTL+QIY+WM++ VPYFKDKGDSNSSAGWK
Sbjct: 1 RRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWK 55
>2a07_F Forkhead box protein P2; double-helix, swapping, homodimer,
monomer, winged-helix, magnesium, transcription/DNA
complex; 1.90A {Homo sapiens} SCOP: a.4.5.14 PDB: 2as5_F
2kiu_A 3qrf_F
Length = 93
Score = 69.3 bits (170), Expect = 2e-15
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSN 166
+YA LI QAI S +++LTL++IY W + YF+ A WK +R N
Sbjct: 7 TYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNA-----ATWKNAVRHN 54
Score = 65.4 bits (160), Expect = 5e-14
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 237 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
+YA LI QAI S +++LTL++IY W + YF+ A WK
Sbjct: 7 TYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNA-----ATWK 48
>2hdc_A Protein (transcription factor); structure, dyanamics, genesis,
winged helix protein, protein/DNA complex; HET: DNA; NMR
{Rattus norvegicus} SCOP: a.4.5.14
Length = 97
Score = 68.0 bits (167), Expect = 6e-15
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSN 166
SY LI+ AI SP+++LTLS I +++ PY+++K W+ IR N
Sbjct: 6 SYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKF-----PAWQNSIRHN 53
Score = 63.8 bits (156), Expect = 2e-13
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 237 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
SY LI+ AI SP+++LTLS I +++ PY+++K W+
Sbjct: 6 SYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKF-----PAWQ 47
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double
helix, transcription-DNA complex; HET: DNA; 2.50A {Homo
sapiens} PDB: 1d5v_A
Length = 102
Score = 68.1 bits (167), Expect = 8e-15
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSN 166
SY LI+ AIQ +P + LTLS+IY W++ PY+++ W+ IR +
Sbjct: 7 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQ-----QRWQNSIRHS 54
Score = 63.8 bits (156), Expect = 2e-13
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 237 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
SY LI+ AIQ +P + LTLS+IY W++ PY+++ W+
Sbjct: 7 SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQ-----QRWQ 48
>2hfh_A Genesis, HFH-2; HNF-3 homologues, winged helix protein; NMR {Rattus
norvegicus} SCOP: a.4.5.14
Length = 109
Score = 67.7 bits (166), Expect = 1e-14
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSN 166
SY LI+ AI SP+++LTLS I +++ PY+++K W+ IR N
Sbjct: 7 SYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKF-----PAWQNSIRHN 54
Score = 63.5 bits (155), Expect = 4e-13
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 237 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
SY LI+ AI SP+++LTLS I +++ PY+++K W+
Sbjct: 7 SYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKF-----PAWQ 48
>2c6y_A Forkhead box protein K2; transcription regulation, DNA-binding
domain, forkhead transcription factors, interleukin
enhancer binding factor; 2.4A {Homo sapiens} SCOP:
a.4.5.14 PDB: 1jxs_A 2a3s_A 2d2w_A
Length = 111
Score = 66.6 bits (163), Expect = 3e-14
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSN 166
SYA LI QAI +P+++LTL+ IY + +N PY++ + GW+ IR N
Sbjct: 20 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRT-----ADKGWQNSIRHN 67
Score = 62.7 bits (153), Expect = 7e-13
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 237 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
SYA LI QAI +P+++LTL+ IY + +N PY++ + GW+
Sbjct: 20 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRT-----ADKGWQ 61
>1kq8_A HFH-1, hepatocyte nuclear factor 3 forkhead homolog 1, winged;
winged helix protein, structure, transcription; NMR
{Rattus norvegicus} SCOP: a.4.5.14
Length = 100
Score = 65.8 bits (161), Expect = 4e-14
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSN 166
SY LI+ AI+ S RLTL++I ++++ P+F+ GW+ +R N
Sbjct: 6 SYIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSY-----TGWRNSVRHN 53
Score = 61.9 bits (151), Expect = 1e-12
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 237 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
SY LI+ AI+ S RLTL++I ++++ P+F+ GW+
Sbjct: 6 SYIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSY-----TGWR 47
>3g73_A Forkhead box protein M1; DNA-binding domain, forkhead transcription
factors, FOXM1, W helix; HET: DNA; 2.21A {Homo sapiens}
Length = 142
Score = 66.0 bits (161), Expect = 1e-13
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 114 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSN 166
SY +I AI S+ +R+TL IY W+ + PYFK GWK IR N
Sbjct: 22 SYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAKP----GWKNSIRHN 70
Score = 62.6 bits (152), Expect = 2e-12
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 237 SYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWK 283
SY +I AI S+ +R+TL IY W+ + PYFK GWK
Sbjct: 22 SYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAKP----GWK 64
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.8 bits (95), Expect = 4e-04
Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 58/178 (32%)
Query: 113 SSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTW---P 169
+Y L+ I+ S E L + D+ + I W P
Sbjct: 178 QTYHVLVGDLIKFSAETLSELI-------------RTTLDAEKVFTQGLNILE--WLENP 222
Query: 170 LPRPD-NYVDEPSPPTSAKL----------EDFETLG---GELSALLS-ESKCNGGLLNC 214
PD +Y+ S P S L + LG GEL + L + + GL+
Sbjct: 223 SNTPDKDYLL--SIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLV-- 278
Query: 215 PTAGGLALKKTATSRRNAWGSSSYADLISQAI-----------QSSPEQRLTLSQIYD 261
TA +A + W S+ + +AI ++ P L S + D
Sbjct: 279 -TAVAIAETDS-------W--ESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILED 326
Score = 33.5 bits (76), Expect = 0.084
Identities = 38/238 (15%), Positives = 77/238 (32%), Gaps = 85/238 (35%)
Query: 96 GLALKKTATSRRNAW------GSSSYADLISQAIQSSPEQRLT----------LSQIYDW 139
G+ L KT+ + ++ W +Y I + ++P LT + + Y
Sbjct: 1632 GMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNP-VNLTIHFGGEKGKRIRENYSA 1690
Query: 140 MI---------QNVPYFKDKGDSNSSAGWK-----MRIRSNTWP---LPRPDNYVDEPSP 182
MI + FK+ + ++S ++ + T P L
Sbjct: 1691 MIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTL------------ 1738
Query: 183 PTS-AKLEDFETLG-------------GELSALLSESKCNGGLLNCPTAG------GLAL 222
A ED ++ G GE +AL +++ + G+ +
Sbjct: 1739 -MEKAAFEDLKSKGLIPADATFAGHSLGEYAALA----SLADVMSIESLVEVVFYRGMTM 1793
Query: 223 KKTATSRRNAWGSSSY---ADLISQAIQSSPEQRL-----TLSQIYDWMIQ----NVP 268
+ R+ G S+Y A + S ++ L + + W+++ NV
Sbjct: 1794 QVAVP--RDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVE 1849
Score = 28.5 bits (63), Expect = 3.8
Identities = 37/239 (15%), Positives = 69/239 (28%), Gaps = 99/239 (41%)
Query: 27 PNDSDVDFGPQM--RIRSNTWPL------------PRPDNYVDEPSP------------- 59
P + + FG + RIR N + + ++E S
Sbjct: 1669 PVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSA 1728
Query: 60 -----P----TS-AKLEDFETLG-------------GELSALLSESKCNGGLLNCPTAG- 95
P A ED ++ G GE +AL +++ +
Sbjct: 1729 TQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALA----SLADVMSIESLVE 1784
Query: 96 -----GLALKKTATSRRNAWGSSSY---ADLISQAIQSSPEQRLTLSQIYDWMIQNVPYF 147
G+ ++ R+ G S+Y A + S ++ L ++++ V
Sbjct: 1785 VVFYRGMTMQVAVP--RDELGRSNYGMIAINPGRVAASFSQEAL------QYVVERV--- 1833
Query: 148 KDKGDSNSSAGWKMRIRSNTWPLPRPDN-----YVDEPSPPTSAKLEDFETLGGELSAL 201
GW + I N N YV + L +T+ L+ +
Sbjct: 1834 ------GKRTGWLVEI-VN-------YNVENQQYV------AAGDLRALDTVTNVLNFI 1872
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 38.3 bits (88), Expect = 0.002
Identities = 43/312 (13%), Positives = 81/312 (25%), Gaps = 103/312 (33%)
Query: 21 SMFKMEPNDSDVDFGPQMRIRSNTWPLPRPDNYVDEPSPPTSAKLEDFETLGGELSALLS 80
S K E + + R + N + ++L+ + +L L
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDRLY------NDNQVFAKYNVSRLQPYL----KLRQALL 145
Query: 81 ESKCNGGLLNCPTAG-GLALKKTATSRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDW 139
E + +L G G KT + S Q +I+ W
Sbjct: 146 ELRPAKNVLIDGVLGSG----KTW--------------VALDVCLSYKVQCKMDFKIF-W 186
Query: 140 MIQNVPYFKDKGDSNSSAGWKMRIRSNTWPLPRPDNYVDEPSPPTSAKLEDFETLGGELS 199
+ N+ + NS + + P N+ ++ KL ++ EL
Sbjct: 187 L--NL------KNCNSPET-VLEMLQKLLYQIDP-NWTSRSDHSSNIKLR-IHSIQAELR 235
Query: 200 ALLSESKCNGGLL----------------NCPT--------------------------A 217
LL LL +C +
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 218 GGLALKKTAT--SRRNAWGSSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKDKGD 275
L + + + + DL + + ++P LS I + I++
Sbjct: 296 MTLTPDEVKSLLLK---YLDCRPQDLPREVLTTNP---RRLSIIAE-SIRDGL------- 341
Query: 276 SNSSAGWKFFKK 287
A W +K
Sbjct: 342 ----ATWDNWKH 349
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 37.1 bits (87), Expect = 0.004
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQI--YDWMIQN-VPYFKDKG 151
+ S DLI Q ++ +P RL+LS + + +M +N KD+G
Sbjct: 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278
Score = 37.1 bits (87), Expect = 0.004
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQI--YDWMIQN-VPYFKDKG 274
+ S DLI Q ++ +P RL+LS + + +M +N KD+G
Sbjct: 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 34.9 bits (81), Expect = 0.025
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFF--KKFR 289
D I ++ P +R T + W+ N +D S S K F K+R
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWR 293
Score = 31.0 bits (71), Expect = 0.38
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSS 156
D I ++ P +R T + W+ N +D S S
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSL 281
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 34.5 bits (80), Expect = 0.026
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
+ + DLIS+ ++ +P QR L ++ + W+ N
Sbjct: 229 FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
Score = 34.5 bits (80), Expect = 0.026
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
+ + DLIS+ ++ +P QR L ++ + W+ N
Sbjct: 229 FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 33.9 bits (78), Expect = 0.057
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 107 RNAWGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP-YFKDKGDSNSS 156
+ S LIS+ + P R+++ +I W ++N+P ++ ++ S
Sbjct: 243 DDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQ 295
Score = 33.9 bits (78), Expect = 0.057
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 230 RNAWGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP-YFKDKGDSNSS 279
+ S LIS+ + P R+++ +I W ++N+P ++ ++ S
Sbjct: 243 DDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQ 295
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 33.3 bits (77), Expect = 0.065
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVP 145
+ + S A L+ +Q P +R T+ I +W Q++P
Sbjct: 233 YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270
Score = 33.3 bits (77), Expect = 0.065
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVP 268
+ + S A L+ +Q P +R T+ I +W Q++P
Sbjct: 233 YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 33.4 bits (77), Expect = 0.075
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVP 145
+ S LI + I + P QR+T+ +I W N+P
Sbjct: 230 FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267
Score = 33.4 bits (77), Expect = 0.075
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVP 268
+ S LI + I + P QR+T+ +I W N+P
Sbjct: 230 FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 33.0 bits (76), Expect = 0.077
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVP 145
+ S A LI + + +P R+++ +I DW ++P
Sbjct: 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271
Score = 33.0 bits (76), Expect = 0.077
Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVP 268
+ S A LI + + +P R+++ +I DW ++P
Sbjct: 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 33.0 bits (76), Expect = 0.085
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
+ S DLIS+ ++ P QRL L + + W+ N
Sbjct: 234 FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271
Score = 33.0 bits (76), Expect = 0.085
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
+ S DLIS+ ++ P QRL L + + W+ N
Sbjct: 234 FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 33.2 bits (76), Expect = 0.093
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVP 145
+ + S L+ +Q P +R T+ I +W Q++P
Sbjct: 238 YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP 275
Score = 33.2 bits (76), Expect = 0.093
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIY--DWMIQNVP 268
+ + S L+ +Q P +R T+ I +W Q++P
Sbjct: 238 YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP 275
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 32.8 bits (75), Expect = 0.096
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
S L+S +Q PE+R TL ++ W+ Q V
Sbjct: 246 LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283
Score = 32.8 bits (75), Expect = 0.096
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
S L+S +Q PE+R TL ++ W+ Q V
Sbjct: 246 LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 32.6 bits (75), Expect = 0.10
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
+DL+ ++ P +R ++ QI W + P
Sbjct: 235 DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272
Score = 32.6 bits (75), Expect = 0.10
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
+DL+ ++ P +R ++ QI W + P
Sbjct: 235 DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 32.6 bits (75), Expect = 0.11
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQI--YDWMIQN 143
+ A LI + +Q+ P R T++++ ++
Sbjct: 237 HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272
Score = 32.6 bits (75), Expect = 0.11
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQI--YDWMIQN 266
+ A LI + +Q+ P R T++++ ++
Sbjct: 237 HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 32.7 bits (75), Expect = 0.12
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQI--YDWMIQN 143
+ A LI + +Q+ P R T++++ ++
Sbjct: 263 HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298
Score = 32.7 bits (75), Expect = 0.12
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQI--YDWMIQN 266
+ A LI + +Q+ P R T++++ ++
Sbjct: 263 HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 32.0 bits (73), Expect = 0.20
Identities = 8/64 (12%), Positives = 19/64 (29%), Gaps = 5/64 (7%)
Query: 87 GLLNCPTAGGLALKKTATSRRNA---WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMI 141
+ P L + + S+ D + ++ +P +R+T W+
Sbjct: 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327
Query: 142 QNVP 145
Sbjct: 328 DTNI 331
Score = 32.0 bits (73), Expect = 0.20
Identities = 8/64 (12%), Positives = 19/64 (29%), Gaps = 5/64 (7%)
Query: 210 GLLNCPTAGGLALKKTATSRRNA---WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMI 264
+ P L + + S+ D + ++ +P +R+T W+
Sbjct: 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327
Query: 265 QNVP 268
Sbjct: 328 DTNI 331
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 31.9 bits (73), Expect = 0.22
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
+ S+ +L+ + + +P +R TL QI W+
Sbjct: 236 YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273
Score = 31.9 bits (73), Expect = 0.22
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
+ S+ +L+ + + +P +R TL QI W+
Sbjct: 236 YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 31.0 bits (71), Expect = 0.32
Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
S+ L+ + + +P R+T+ I W + +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270
Score = 31.0 bits (71), Expect = 0.32
Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
S+ L+ + + +P R+T+ I W + +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 31.1 bits (71), Expect = 0.34
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
S LI + + P R +L +I WM
Sbjct: 255 HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292
Score = 31.1 bits (71), Expect = 0.34
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
S LI + + P R +L +I WM
Sbjct: 255 HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 31.1 bits (71), Expect = 0.36
Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
S+ L+ + + +P R+T+ I W + +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270
Score = 31.1 bits (71), Expect = 0.36
Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
S+ L+ + + +P R+T+ I W + +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 31.2 bits (71), Expect = 0.38
Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 110 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WM 140
SS LI + P R T +I + WM
Sbjct: 265 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
Score = 31.2 bits (71), Expect = 0.38
Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 233 WGSSSYADLISQAIQSSPEQRLTLSQIYD--WM 263
SS LI + P R T +I + WM
Sbjct: 265 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 30.8 bits (70), Expect = 0.46
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQN 143
SS+ L++ + P QR + + +Q
Sbjct: 273 SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306
Score = 30.8 bits (70), Expect = 0.46
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQN 266
SS+ L++ + P QR + + +Q
Sbjct: 273 SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 30.8 bits (69), Expect = 0.50
Identities = 5/28 (17%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQ 142
LI + + +RL + + +Q
Sbjct: 331 TLIGRFLNFDRRRRLLPLEAMETPEFLQ 358
Score = 30.8 bits (69), Expect = 0.50
Identities = 5/28 (17%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQ 265
LI + + +RL + + +Q
Sbjct: 331 TLIGRFLNFDRRRRLLPLEAMETPEFLQ 358
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 30.8 bits (70), Expect = 0.51
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQI--YDWMIQNVPYFKDKGDSNSSAGWKMRIRSNTWP 169
S L+SQ + +P R +++ I ++ + + F K + + P
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQP 309
Query: 170 LPRPDNYVDEPSPPTSAK 187
+P + S
Sbjct: 310 IPAKRPASGQNSISVMPA 327
Score = 28.5 bits (64), Expect = 2.9
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQI--YDWMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
S L+SQ + +P R +++ I ++ + + F K F KF
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFG 306
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 29.2 bits (66), Expect = 1.5
Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 5/52 (9%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
LI + +P++R+T Q W+ ++ KKF
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTV---DCLKKFN 311
Score = 27.7 bits (62), Expect = 5.1
Identities = 7/41 (17%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNS 155
LI + +P++R+T Q W+ ++
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDT 303
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 29.2 bits (65), Expect = 1.6
Identities = 5/26 (19%), Positives = 9/26 (34%), Gaps = 2/26 (7%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WM 140
L+ ++ E RL Q +
Sbjct: 338 ALLEGFLRYPKEDRLLPLQAMETPEY 363
Score = 29.2 bits (65), Expect = 1.6
Identities = 5/26 (19%), Positives = 9/26 (34%), Gaps = 2/26 (7%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WM 263
L+ ++ E RL Q +
Sbjct: 338 ALLEGFLRYPKEDRLLPLQAMETPEY 363
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 29.3 bits (66), Expect = 1.7
Identities = 8/57 (14%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
S +LI + +R T + + W+ + +KF
Sbjct: 275 SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFE 331
Score = 27.4 bits (61), Expect = 7.1
Identities = 6/34 (17%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQN 143
S +LI + +R T + + W+ +
Sbjct: 275 SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 28.8 bits (65), Expect = 1.8
Identities = 7/36 (19%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQI--YDWMIQNVP 145
L+ + + PE R S+I + + P
Sbjct: 241 DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276
Score = 28.8 bits (65), Expect = 1.8
Identities = 7/36 (19%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQI--YDWMIQNVP 268
L+ + + PE R S+I + + P
Sbjct: 241 DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 28.8 bits (65), Expect = 2.0
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
DLI++ + +P +R+T ++ W+ + KKF
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETV---DCLKKFN 294
Score = 27.3 bits (61), Expect = 6.2
Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNS 155
DLI++ + +P +R+T ++ W+ +
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQET 286
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 28.3 bits (64), Expect = 2.4
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 110 WGSSSYA--DLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
W + S LI + + SP+QR+T Q + W + +
Sbjct: 231 WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270
Score = 28.3 bits (64), Expect = 2.4
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 233 WGSSSYA--DLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
W + S LI + + SP+QR+T Q + W + +
Sbjct: 231 WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 28.4 bits (64), Expect = 2.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 110 WGS-SSYA-DLISQAIQSSPEQRLTLSQIYD--WMIQNVP 145
W S A DLIS+ + +QRL+ +Q+ W+ P
Sbjct: 265 WAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304
Score = 28.4 bits (64), Expect = 2.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 233 WGS-SSYA-DLISQAIQSSPEQRLTLSQIYD--WMIQNVP 268
W S A DLIS+ + +QRL+ +Q+ W+ P
Sbjct: 265 WAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 28.5 bits (64), Expect = 2.9
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
S S DLI + + P R++ D W+ + ++F+
Sbjct: 255 SESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQ 311
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 28.4 bits (64), Expect = 2.9
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
D I + + +RLT+ + W I V + S + F+K
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPW-ITPVDNQQAMVRRESVVNLENFRKQY 301
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 28.4 bits (64), Expect = 2.9
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 110 WGSSSYA--DLISQAIQSSPEQRLTLSQIYD--WMIQN 143
W + S DLI + + P R+T +Q + W+ +
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
Score = 28.4 bits (64), Expect = 2.9
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 233 WGSSSYA--DLISQAIQSSPEQRLTLSQIYD--WMIQN 266
W + S DLI + + P R+T +Q + W+ +
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 28.2 bits (63), Expect = 3.5
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDK 150
+ + LI +Q +PE+RL+++++ I K
Sbjct: 275 YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPK 315
Score = 28.2 bits (63), Expect = 3.5
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDK 273
+ + LI +Q +PE+RL+++++ I K
Sbjct: 275 YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPK 315
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 28.0 bits (63), Expect = 3.5
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 110 WGSSSYA-DLISQAIQSSPEQRLTLSQIYD--WM 140
+ A DL+ Q + PE+R + +Q+ W
Sbjct: 249 RPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
Score = 28.0 bits (63), Expect = 3.5
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 233 WGSSSYA-DLISQAIQSSPEQRLTLSQIYD--WM 263
+ A DL+ Q + PE+R + +Q+ W
Sbjct: 249 RPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 27.8 bits (62), Expect = 4.5
Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKMRIRSN 166
D I +Q P +RLT+ + W+ + + S+ + +I+
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEK 334
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 27.7 bits (62), Expect = 4.7
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
DL+ + I P++RLT Q W+ + K ++F
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPWVTGKAA-----NFVHMDTAQKKLQEFN 330
Score = 27.7 bits (62), Expect = 4.8
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKD 149
DL+ + I P++RLT Q W+ F
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVH 318
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 27.5 bits (62), Expect = 4.7
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKD 149
LI + +P++R+T Q W+
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASA 274
Score = 27.5 bits (62), Expect = 4.7
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKD 272
LI + +P++R+T Q W+
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASA 274
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 27.6 bits (62), Expect = 4.8
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WM 140
+ DLI++ + +PE R+ + +I W+
Sbjct: 266 AEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
Score = 27.6 bits (62), Expect = 4.8
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WM 263
+ DLI++ + +PE R+ + +I W+
Sbjct: 266 AEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 27.3 bits (61), Expect = 5.6
Identities = 9/52 (17%), Positives = 16/52 (30%), Gaps = 3/52 (5%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
D I + + +RLT+ + W+ + FKK
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLEN-FKKQY 301
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 27.3 bits (61), Expect = 5.9
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGD 152
S DLI + + P R+T +Q + W+ + D
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISD 292
Score = 27.3 bits (61), Expect = 5.9
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGD 275
S DLI + + P R+T +Q + W+ + D
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISD 292
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 27.3 bits (61), Expect = 6.0
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 110 WGS-SSYA-DLISQAIQSSPEQRLTLSQIYD--WMIQN 143
W S LI +++ P QR+T+++ + W++Q+
Sbjct: 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263
Score = 27.3 bits (61), Expect = 6.0
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 233 WGS-SSYA-DLISQAIQSSPEQRLTLSQIYD--WMIQN 266
W S LI +++ P QR+T+++ + W++Q+
Sbjct: 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 27.4 bits (61), Expect = 6.1
Identities = 5/31 (16%), Positives = 12/31 (38%), Gaps = 2/31 (6%)
Query: 108 NAWGSSSYA--DLISQAIQSSPEQRLTLSQI 136
+ +LI + I P++R + +
Sbjct: 251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHV 281
Score = 27.4 bits (61), Expect = 6.1
Identities = 5/31 (16%), Positives = 12/31 (38%), Gaps = 2/31 (6%)
Query: 231 NAWGSSSYA--DLISQAIQSSPEQRLTLSQI 259
+ +LI + I P++R + +
Sbjct: 251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHV 281
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 27.3 bits (61), Expect = 6.6
Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 233 WGS-SSYA-DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKF 288
W S A DL+ + + P +R+T+ + + W+ + Y + + +KF
Sbjct: 256 WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV---EQLRKF 312
Query: 289 R 289
Sbjct: 313 N 313
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 26.9 bits (60), Expect = 7.2
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKD 149
++ + SP +R I I+N F+D
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINI----IEN-AVFED 285
Score = 26.9 bits (60), Expect = 7.2
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKD 272
++ + SP +R I I+N F+D
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINI----IEN-AVFED 285
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 26.9 bits (60), Expect = 7.4
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQN 143
S DL+ + + P+ R T + W+
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
Score = 26.9 bits (60), Expect = 7.4
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQN 266
S DL+ + + P+ R T + W+
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 26.9 bits (59), Expect = 7.8
Identities = 6/31 (19%), Positives = 9/31 (29%)
Query: 106 RRNAWGSSSYADLISQAIQSSPEQRLTLSQI 136
R L+ ++ E RL Q
Sbjct: 331 RSCKNIPQPVRALLEGFLRYPKEDRLLPLQA 361
Score = 26.9 bits (59), Expect = 7.8
Identities = 6/31 (19%), Positives = 9/31 (29%)
Query: 229 RRNAWGSSSYADLISQAIQSSPEQRLTLSQI 259
R L+ ++ E RL Q
Sbjct: 331 RSCKNIPQPVRALLEGFLRYPKEDRLLPLQA 361
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 27.0 bits (60), Expect = 8.1
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Query: 110 WGS-SSYA-DLISQAIQSSPEQRLTLSQIYD--WMIQN 143
W S A DL+ + + P+ R T + W+
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406
Score = 27.0 bits (60), Expect = 8.1
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Query: 233 WGS-SSYA-DLISQAIQSSPEQRLTLSQIYD--WMIQN 266
W S A DL+ + + P+ R T + W+
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 27.0 bits (60), Expect = 8.2
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNS 155
S DLI Q +Q ++R++ Q + W+ + + + S
Sbjct: 265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPS 310
Score = 27.0 bits (60), Expect = 8.2
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNS 278
S DLI Q +Q ++R++ Q + W+ + + + S
Sbjct: 265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPS 310
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 26.9 bits (60), Expect = 8.5
Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQN 143
LI +++ P +RLT++Q + W+ Q+
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNHPWINQS 294
Score = 26.9 bits (60), Expect = 8.5
Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQN 266
LI +++ P +RLT++Q + W+ Q+
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNHPWINQS 294
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 26.8 bits (59), Expect = 9.2
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Query: 112 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKD 149
++ + SP +R + I I+N F++
Sbjct: 299 YPQEHMMVQDMLSPSPTERPEATDI----IEN-AIFEN 331
Score = 26.8 bits (59), Expect = 9.2
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Query: 235 SSSYADLISQAIQSSPEQRLTLSQIYDWMIQNVPYFKD 272
++ + SP +R + I I+N F++
Sbjct: 299 YPQEHMMVQDMLSPSPTERPEATDI----IEN-AIFEN 331
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 26.8 bits (60), Expect = 9.5
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQNVPYFKDKGDSNSSAGWKFFKKFR 289
D I + + P++R+T+ W+ +++ K FKKF
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEK-FKKFA 300
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 26.7 bits (59), Expect = 9.9
Identities = 6/29 (20%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQN 143
DL+S + + ++R + W+ Q
Sbjct: 309 DLLSNLLNRNVDERFDAMRALQHPWISQF 337
Score = 26.7 bits (59), Expect = 9.9
Identities = 6/29 (20%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQN 266
DL+S + + ++R + W+ Q
Sbjct: 309 DLLSNLLNRNVDERFDAMRALQHPWISQF 337
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 26.5 bits (59), Expect = 9.9
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 117 DLISQAIQSSPEQRLTLSQIYD--WMIQN 143
DL+S+ + P QRLT + + W++
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIVHW 284
Score = 26.5 bits (59), Expect = 9.9
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 240 DLISQAIQSSPEQRLTLSQIYD--WMIQN 266
DL+S+ + P QRLT + + W++
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIVHW 284
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.312 0.129 0.392
Gapped
Lambda K H
0.267 0.0707 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,251,638
Number of extensions: 229026
Number of successful extensions: 564
Number of sequences better than 10.0: 1
Number of HSP's gapped: 563
Number of HSP's successfully gapped: 135
Length of query: 289
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 196
Effective length of database: 4,105,140
Effective search space: 804607440
Effective search space used: 804607440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (25.8 bits)