Query psy1682
Match_columns 70
No_of_seqs 105 out of 1105
Neff 10.9
Searched_HMMs 46136
Date Fri Aug 16 22:53:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1682.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1682hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14604 SH3_9: Variant SH3 do 99.7 1.3E-16 2.9E-21 67.1 5.8 49 4-54 1-49 (49)
2 PF07653 SH3_2: Variant SH3 do 99.6 3.1E-15 6.7E-20 64.3 5.9 53 2-56 2-55 (55)
3 PF00018 SH3_1: SH3 domain; I 99.6 2.9E-15 6.3E-20 62.8 5.6 48 3-50 1-48 (48)
4 KOG2070|consensus 99.5 2.4E-14 5.2E-19 82.4 2.7 54 2-57 20-73 (661)
5 cd00174 SH3 Src homology 3 dom 99.4 2.1E-12 4.6E-17 54.7 6.6 53 1-54 1-53 (54)
6 smart00326 SH3 Src homology 3 99.4 2E-12 4.4E-17 55.4 6.3 53 2-55 5-57 (58)
7 KOG2199|consensus 99.4 1.8E-13 4E-18 77.0 1.1 53 2-56 218-270 (462)
8 KOG1029|consensus 99.3 9.3E-13 2E-17 79.2 2.7 53 2-56 1056-1108(1118)
9 KOG1118|consensus 99.3 1.7E-12 3.7E-17 71.2 2.4 56 2-59 309-364 (366)
10 KOG4226|consensus 99.2 2.1E-11 4.5E-16 66.4 4.6 56 2-59 110-165 (379)
11 KOG4225|consensus 99.2 3.3E-11 7.1E-16 68.7 4.4 55 2-58 233-287 (489)
12 KOG0162|consensus 99.2 1.8E-11 3.8E-16 73.7 3.1 53 1-55 1053-1105(1106)
13 KOG4278|consensus 99.2 4.2E-11 9.1E-16 71.8 4.5 67 1-69 92-159 (1157)
14 KOG4225|consensus 99.1 4.6E-11 1E-15 68.1 3.4 54 2-55 435-488 (489)
15 KOG4226|consensus 99.1 8.7E-11 1.9E-15 64.0 3.0 56 2-58 194-251 (379)
16 KOG4348|consensus 99.0 6.9E-11 1.5E-15 67.8 0.4 56 2-59 103-158 (627)
17 KOG2996|consensus 99.0 6.5E-10 1.4E-14 65.8 3.3 52 2-55 808-861 (865)
18 KOG2856|consensus 98.9 3.6E-10 7.9E-15 63.6 0.5 54 2-56 417-471 (472)
19 KOG1264|consensus 98.9 1.1E-09 2.3E-14 66.9 2.3 56 2-58 777-832 (1267)
20 KOG2546|consensus 98.9 1.4E-09 3.1E-14 62.1 2.5 55 2-58 426-480 (483)
21 KOG1702|consensus 98.8 4.9E-09 1.1E-13 55.2 3.2 54 2-55 210-263 (264)
22 KOG3875|consensus 98.8 1.2E-09 2.6E-14 60.4 0.2 58 2-59 271-333 (362)
23 KOG4348|consensus 98.8 9.3E-09 2E-13 59.4 3.5 55 1-57 263-319 (627)
24 KOG0197|consensus 98.8 2.1E-09 4.5E-14 62.3 0.9 68 2-69 14-88 (468)
25 KOG4792|consensus 98.7 3.7E-09 7.9E-14 56.5 1.4 54 2-56 127-180 (293)
26 KOG1029|consensus 98.7 1.7E-08 3.7E-13 61.6 2.6 57 2-60 696-754 (1118)
27 KOG0515|consensus 98.7 1.2E-08 2.5E-13 60.2 1.8 53 2-56 686-741 (752)
28 KOG3655|consensus 98.5 2.8E-08 6E-13 57.5 1.2 54 2-56 430-483 (484)
29 KOG3523|consensus 98.5 1.6E-08 3.5E-13 60.0 -1.2 56 3-58 612-667 (695)
30 KOG3601|consensus 98.4 1.9E-07 4.2E-12 49.4 2.4 52 3-56 167-218 (222)
31 KOG1843|consensus 98.4 1.7E-07 3.8E-12 53.7 2.0 52 2-55 419-472 (473)
32 KOG3775|consensus 98.2 1.1E-06 2.3E-11 50.2 2.4 57 3-59 266-322 (482)
33 KOG4575|consensus 98.1 8E-06 1.7E-10 49.5 4.1 56 1-56 10-65 (874)
34 KOG4773|consensus 97.9 1.3E-06 2.9E-11 49.3 -0.6 57 3-61 179-235 (386)
35 KOG3557|consensus 97.9 2.1E-06 4.6E-11 51.7 -0.2 56 2-59 503-558 (721)
36 KOG0609|consensus 97.8 5.7E-06 1.2E-10 49.0 0.6 54 2-55 217-280 (542)
37 KOG2996|consensus 97.6 4E-05 8.6E-10 46.4 2.1 55 14-68 625-691 (865)
38 KOG2222|consensus 97.6 9.4E-06 2E-10 48.1 -0.8 51 3-55 552-602 (848)
39 KOG3632|consensus 97.6 0.00015 3.2E-09 46.2 4.0 58 1-60 1140-1206(1335)
40 KOG2528|consensus 97.5 7.2E-05 1.6E-09 43.7 1.8 55 2-57 5-60 (490)
41 KOG0199|consensus 97.4 0.00055 1.2E-08 42.8 5.0 49 6-54 381-430 (1039)
42 KOG4792|consensus 97.2 0.0013 2.8E-08 35.9 4.7 45 12-58 242-286 (293)
43 KOG3771|consensus 96.9 0.00045 9.8E-09 40.7 1.4 50 2-53 403-453 (460)
44 PF14603 hSH3: Helically-exten 96.8 0.0071 1.5E-07 28.2 4.3 44 13-57 30-73 (89)
45 KOG1451|consensus 96.5 0.0037 8E-08 38.4 3.2 50 5-56 762-812 (812)
46 KOG4429|consensus 96.3 0.00095 2.1E-08 37.6 -0.0 52 2-55 366-417 (421)
47 KOG3812|consensus 96.3 0.0019 4.1E-08 37.2 0.9 48 3-50 62-117 (475)
48 KOG3725|consensus 96.2 0.001 2.2E-08 36.9 -0.2 51 2-54 320-372 (375)
49 KOG3601|consensus 96.2 0.00068 1.5E-08 36.3 -1.0 50 2-53 3-53 (222)
50 KOG3705|consensus 95.9 0.011 2.5E-07 34.9 2.8 54 2-55 512-565 (580)
51 KOG3565|consensus 95.8 0.0013 2.9E-08 40.5 -1.1 56 2-57 581-637 (640)
52 PF08239 SH3_3: Bacterial SH3 95.0 0.1 2.2E-06 21.8 4.8 38 16-54 17-55 (55)
53 KOG3632|consensus 93.7 0.18 3.8E-06 33.3 4.1 58 2-60 450-514 (1335)
54 PRK10884 SH3 domain-containing 93.6 0.27 5.8E-06 26.6 4.2 40 16-56 48-88 (206)
55 smart00287 SH3b Bacterial SH3 91.0 0.67 1.5E-05 19.7 5.1 37 16-53 25-61 (63)
56 PF06347 SH3_4: Bacterial SH3 89.5 0.93 2E-05 18.9 4.4 35 16-53 19-53 (55)
57 PRK13914 invasion associated s 87.1 3.3 7.1E-05 25.5 5.0 39 16-55 103-141 (481)
58 smart00743 Agenet Tudor-like d 84.8 2.1 4.7E-05 18.1 3.1 24 17-40 2-25 (61)
59 KOG0040|consensus 83.1 0.0082 1.8E-07 40.6 -7.1 53 3-57 972-1024(2399)
60 COG3103 SH3 domain protein [Si 74.1 12 0.00027 20.5 4.6 39 16-55 48-87 (205)
61 PF11302 DUF3104: Protein of u 65.5 13 0.00027 17.1 2.9 24 16-39 4-33 (75)
62 KOG3580|consensus 62.6 23 0.00049 23.1 3.9 52 3-54 508-566 (1027)
63 PF15172 Prolactin_RP: Prolact 50.6 13 0.00028 15.3 1.1 15 55-69 9-24 (47)
64 PF12913 SH3_6: SH3 domain of 43.0 31 0.00067 14.7 4.7 33 16-50 21-54 (54)
65 KOG4384|consensus 35.8 28 0.00061 20.8 1.4 45 10-56 149-193 (361)
66 PRK13545 tagH teichoic acids e 26.8 1.8E+02 0.004 18.8 4.0 25 32-57 391-415 (549)
67 PF05641 Agenet: Agenet domain 26.1 72 0.0016 13.9 2.6 22 18-39 1-25 (68)
68 KOG1314|consensus 24.8 73 0.0016 19.4 1.8 41 12-53 330-379 (414)
69 PF07828 PA-IL: PA-IL-like pro 20.5 1.2E+02 0.0025 15.4 1.8 14 15-28 17-30 (121)
No 1
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.70 E-value=1.3e-16 Score=67.12 Aligned_cols=49 Identities=43% Similarity=0.998 Sum_probs=43.4
Q ss_pred EeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCee
Q psy1682 4 ALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVA 54 (70)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 54 (70)
|+|+|.+..+++|+|++|+.|.++...+++||.++. +++.|+||++|++
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~g~~--~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWYGRN--TGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEEEEE--TTEEEEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEEEEE--CCEEEEECHHhCC
Confidence 689999999999999999999999888899999997 6899999999974
No 2
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=99.62 E-value=3.1e-15 Score=64.31 Aligned_cols=53 Identities=36% Similarity=0.918 Sum_probs=45.9
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEE-EcCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEIL-NDTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~-~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
++|++||.+..+++|++++|++|.++ .....+||.++. +++.|+||.++++++
T Consensus 2 ~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~--~g~~G~~P~~~v~~~ 55 (55)
T PF07653_consen 2 YRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLGEN--NGRRGWFPSSYVEEI 55 (55)
T ss_dssp EEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEEEE--TTEEEEEEGGGEEEH
T ss_pred EEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEEEE--CCcEEEEcHHHEEEC
Confidence 68999999999999999999999998 666779999998 689999999999763
No 3
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=99.62 E-value=2.9e-15 Score=62.78 Aligned_cols=48 Identities=44% Similarity=0.987 Sum_probs=43.8
Q ss_pred EEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEec
Q psy1682 3 VALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPS 50 (70)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~ 50 (70)
+|+|+|.+..+++|++.+|+.+.++...+.+||.++...++..|+||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence 589999999999999999999999998888999999987789999995
No 4
>KOG2070|consensus
Probab=99.48 E-value=2.4e-14 Score=82.41 Aligned_cols=54 Identities=30% Similarity=0.753 Sum_probs=50.2
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLK 57 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 57 (70)
++|.|.|.+...++|+|.+||+|.|++..+.|||.|+. +++.||||++||.++.
T Consensus 20 vrAkf~F~gsNnDELsf~KgDvItVTq~eeGGWWEGTl--ng~TGWFPsnYV~eik 73 (661)
T KOG2070|consen 20 VRAKFNFQGSNNDELSFSKGDVITVTQVEEGGWWEGTL--NGRTGWFPSNYVREIK 73 (661)
T ss_pred EEEEeecccCCCceeccccCCEEEEEEeccCcceeccc--cCccCccchHHHHHHh
Confidence 67889999999999999999999999999999999998 5899999999998764
No 5
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=99.43 E-value=2.1e-12 Score=54.68 Aligned_cols=53 Identities=45% Similarity=0.909 Sum_probs=46.7
Q ss_pred CEEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCee
Q psy1682 1 IFVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVA 54 (70)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 54 (70)
.++++++|.+..+++|++.+|+.+.++.....+||.++.... ..|+||.+++.
T Consensus 1 ~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~-~~G~vP~~~v~ 53 (54)
T cd00174 1 YVRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWEGRLLGG-KRGLFPSNYVE 53 (54)
T ss_pred CEEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEECCC-CEEEEccccCc
Confidence 368999999999999999999999999887789999998643 89999998875
No 6
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=99.42 E-value=2e-12 Score=55.38 Aligned_cols=53 Identities=42% Similarity=0.872 Sum_probs=47.4
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
++++++|.+..+.+|++.+|+.+.++.....+||.++... +..|+||.+++..
T Consensus 5 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~-~~~G~vP~~~v~~ 57 (58)
T smart00326 5 VRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGR-GKEGLFPSNYVEE 57 (58)
T ss_pred EEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEeCC-CCEEEEchHHEEE
Confidence 5789999999999999999999999988788999998864 8899999998864
No 7
>KOG2199|consensus
Probab=99.36 E-value=1.8e-13 Score=76.98 Aligned_cols=53 Identities=36% Similarity=0.822 Sum_probs=48.5
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
++|+|||++.+.++|+|+.|++|.|++.....||.|... +..|+||+++|...
T Consensus 218 VRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~~~--~~~GlFPsnfVT~~ 270 (462)
T KOG2199|consen 218 VRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGENH--RGIGLFPSNFVTAD 270 (462)
T ss_pred hhhhhcccccCCCccceecCcEEEEcccCCcchhccccC--Ccccccchhhhhhh
Confidence 689999999999999999999999999999999999984 66799999999764
No 8
>KOG1029|consensus
Probab=99.32 E-value=9.3e-13 Score=79.18 Aligned_cols=53 Identities=42% Similarity=0.955 Sum_probs=48.8
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
+.++|||.++.+++|+|.+|++|.|+.+++..||.|.. ++.+|+||++||...
T Consensus 1056 viamYdY~AqndDELsF~kgdiI~VlnkdepeWW~Ge~--ng~sGLFPSNYV~k~ 1108 (1118)
T KOG1029|consen 1056 VIAMYDYEAQNDDELSFKKGDIINVLNKDEPEWWSGER--NGKSGLFPSNYVQKQ 1108 (1118)
T ss_pred eEEeeccccCCcccccccCCCEEEecCCCChhhhcccc--cCccccCcccccccc
Confidence 46899999999999999999999999999999999987 589999999999554
No 9
>KOG1118|consensus
Probab=99.29 E-value=1.7e-12 Score=71.23 Aligned_cols=56 Identities=27% Similarity=0.678 Sum_probs=51.3
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKSI 59 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 59 (70)
|+++|||++....+|.|+.|++|.++...+.+||.|... |.+|+||.+|+..+.++
T Consensus 309 cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~~~--g~sG~FPvnYv~vlvpl 364 (366)
T KOG1118|consen 309 CRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGEKH--GESGMFPVNYVEVLVPL 364 (366)
T ss_pred heeeeccCCCCCCccCcccCceeeehhhcCcchhhheec--CccCccccceeEEeccC
Confidence 789999999999999999999999999999999999874 78999999999887654
No 10
>KOG4226|consensus
Probab=99.23 E-value=2.1e-11 Score=66.43 Aligned_cols=56 Identities=29% Similarity=0.646 Sum_probs=50.0
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKSI 59 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 59 (70)
+++.|.|.++..++|++.+|..+.++.++.++||.|.. ++..||||++|+.+..+.
T Consensus 110 AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~~--ng~VGWFPSNYv~E~~ds 165 (379)
T KOG4226|consen 110 AVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGSY--NGQVGWFPSNYVTEEVDS 165 (379)
T ss_pred eEEEEeeccccccccccccCcEEEEEEeccCcceeccc--CCeeccccccceehhccc
Confidence 45678899999999999999999999999999999988 699999999999876443
No 11
>KOG4225|consensus
Probab=99.20 E-value=3.3e-11 Score=68.74 Aligned_cols=55 Identities=31% Similarity=0.642 Sum_probs=51.1
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeeccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKS 58 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 58 (70)
++|+|+|.++...+|.|.+|++|.++.+.+..|..|.+ .|+.|+||.+|++.+..
T Consensus 233 aralf~F~~qt~kEL~~~kGDIVyI~rkvD~nWyeGEh--hGr~GifP~sYvE~~~~ 287 (489)
T KOG4225|consen 233 ARALFDFEAQTPKELPFNKGDIVYILRKVDQNWYEGEH--HGRVGIFPASYVEILTP 287 (489)
T ss_pred hhheeccccCCccccccCCCCEEEEEeeccCceeeeee--cceecceechheeecCc
Confidence 47899999999999999999999999999999999998 59999999999998765
No 12
>KOG0162|consensus
Probab=99.18 E-value=1.8e-11 Score=73.68 Aligned_cols=53 Identities=40% Similarity=0.905 Sum_probs=48.8
Q ss_pred CEEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 1 IFVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
+|.|+|+|.+++.++|+|++|++|.++.++..|||.++. ++..||||.+|+.+
T Consensus 1053 ~~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~gk~--~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1053 VCEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWLGKL--NGKEGLFPGNYVTE 1105 (1106)
T ss_pred ceeeeccCCCCCcccccccCCCEEEEeccCCCcchhhcc--CCcccccccccccc
Confidence 378999999999999999999999999999999999985 68999999999875
No 13
>KOG4278|consensus
Probab=99.18 E-value=4.2e-11 Score=71.83 Aligned_cols=67 Identities=42% Similarity=0.772 Sum_probs=57.7
Q ss_pred CEEEeeccCCCCCCCceecCCCEEEEEEcCC-CCeEEEEeCCCCcEEEEecCCeeecccccCCCCCcCCC
Q psy1682 1 IFVALYDYDARTDEDLSFRKGEHLEILNDTQ-GDWWLARSKATKQEGYIPSNYVAKLKSIEAEPYDFKKS 69 (70)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~-~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 69 (70)
+++|+|||.+.++..|++.+|+.+.++.-.. ..|...+.+ +|+ ||+|++|+.++..++...||||+.
T Consensus 92 LFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEartK-NGq-GWVPSNyItPvNSLeKhsWYHGpv 159 (1157)
T KOG4278|consen 92 LFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEARTK-NGQ-GWVPSNYITPVNSLEKHSWYHGPV 159 (1157)
T ss_pred eeEeeeeeeccccceeeeecCceEEEeeecCCCcceeeccc-CCC-ccccccccccccchhhcccccCcc
Confidence 3689999999999999999999999988654 457777653 455 999999999999999999999973
No 14
>KOG4225|consensus
Probab=99.14 E-value=4.6e-11 Score=68.13 Aligned_cols=54 Identities=28% Similarity=0.756 Sum_probs=50.3
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
++|+|.|.++..++|.|..||+|.|+++++++|..|+...++.-|.||.+||..
T Consensus 435 yrAly~Y~pqnedeLEl~egDii~VmeKcddgWfvGts~rtg~fGtFPgnyV~~ 488 (489)
T KOG4225|consen 435 YRALYSYRPQNEDELELREGDIIDVMEKCDDGWFVGTSRRTGKFGTFPGNYVKR 488 (489)
T ss_pred ceeccccCCCCchhheeccCCEEeeeecccCcceeccceecccccccCcccccc
Confidence 579999999999999999999999999999999999887789999999999864
No 15
>KOG4226|consensus
Probab=99.09 E-value=8.7e-11 Score=64.05 Aligned_cols=56 Identities=48% Similarity=0.907 Sum_probs=49.0
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC--CCCeEEEEeCCCCcEEEEecCCeeeccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT--QGDWWLARSKATKQEGYIPSNYVAKLKS 58 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~--~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 58 (70)
++|+|+|....+.+|+|.+|+.+.++++. ++.||.+++. +|+.|++|++|+..+.+
T Consensus 194 VvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~-~G~vGLVPrNYv~vl~d 251 (379)
T KOG4226|consen 194 VVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNA-RGQVGLVPRNYVVVLSD 251 (379)
T ss_pred EEEEecccCCChhhcccccCceeEeccCCCCCchHHhhccc-CCccceeecceEEEecc
Confidence 67899999999999999999999988865 5689999985 69999999999987644
No 16
>KOG4348|consensus
Probab=99.00 E-value=6.9e-11 Score=67.81 Aligned_cols=56 Identities=25% Similarity=0.695 Sum_probs=51.0
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKSI 59 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 59 (70)
|++.|.|.++.+++|.|+.|++|.+......|||.|.. ++..|+||++++..+...
T Consensus 103 c~v~f~Y~pqndDELelkVGDiIeli~eVEeGWw~G~L--ngk~GmFPsNFVkel~~~ 158 (627)
T KOG4348|consen 103 CVVTFAYSPQNDDELELKVGDIIELISEVEEGWWKGKL--NGKVGMFPSNFVKELPTP 158 (627)
T ss_pred EEEEEeecCCCCceeeeeeccHHHhhhHhhhhhhhcee--cCcccccchhhceecCCC
Confidence 78899999999999999999999999988999999988 488999999999887544
No 17
>KOG2996|consensus
Probab=98.96 E-value=6.5e-10 Score=65.82 Aligned_cols=52 Identities=33% Similarity=0.716 Sum_probs=44.5
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC--CCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT--QGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~--~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
+++-|||.+.+-.+|+++.|+++.++.+. +.|||.|.. +++.||||++||++
T Consensus 808 AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGev--ngrvGwFPstYVee 861 (865)
T KOG2996|consen 808 AVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEV--NGRVGWFPSTYVEE 861 (865)
T ss_pred eeeccccCCCchhhcccccCCEEEEehhccccCceeccee--cCcccccccccccc
Confidence 46678888888889999999999988765 469999998 59999999999975
No 18
>KOG2856|consensus
Probab=98.89 E-value=3.6e-10 Score=63.64 Aligned_cols=54 Identities=35% Similarity=0.706 Sum_probs=46.3
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC-CCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT-QGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~-~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
++++|||.+++.++|+|+.|+.+..+... ..||..|+. .+|+.|++|.+||..+
T Consensus 417 vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl-~~G~vGLyPAnYVe~~ 471 (472)
T KOG2856|consen 417 VRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGRL-DSGRVGLYPANYVECI 471 (472)
T ss_pred EEeeeccCcccccchhhccccHhhhcCCccccccccccc-cCCcccccchhhhhcc
Confidence 68999999999999999999999876654 458888886 3599999999999754
No 19
>KOG1264|consensus
Probab=98.88 E-value=1.1e-09 Score=66.94 Aligned_cols=56 Identities=34% Similarity=0.756 Sum_probs=49.6
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeeccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKS 58 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 58 (70)
|+|+|+|.+..+++|+|.++-+|..+++.+.+||.|... ....+|||++||+++.+
T Consensus 777 ~kAL~~Yka~r~DELSFpk~aiItnv~keeg~wWrGdYG-g~iq~wfPsnyVeei~~ 832 (1267)
T KOG1264|consen 777 VKALYDYKAKRSDELSFPKGAIITNVSKEEGGWWRGDYG-GRIQQWFPSNYVEEIST 832 (1267)
T ss_pred hhhhhccccCCcccccccccceeEeeeccCCceeecccc-cceeeeccHHHhhhhcc
Confidence 678999999999999999999999999999999999873 23568999999998765
No 20
>KOG2546|consensus
Probab=98.87 E-value=1.4e-09 Score=62.07 Aligned_cols=55 Identities=38% Similarity=0.731 Sum_probs=49.7
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeeccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKS 58 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 58 (70)
++++|||.+...++|+|..+-+|.++.+.+++||.+.. .+..|+||.+|+.++..
T Consensus 426 Vv~iydy~~~KddeLsf~E~ailyv~kknddgw~EgV~--~~VTglFpgnyve~~~~ 480 (483)
T KOG2546|consen 426 VVAIYDYTADKDDELSFAEGAILYVLKKNDDGWYEGVQ--DGVTGLFPGNYVEPLKA 480 (483)
T ss_pred HHhhcccccccccccccccccEEEEEEecCCcchhhee--cCcceeccCcccccccc
Confidence 46899999999999999999999999999999999987 47899999999987754
No 21
>KOG1702|consensus
Probab=98.82 E-value=4.9e-09 Score=55.22 Aligned_cols=54 Identities=26% Similarity=0.597 Sum_probs=49.0
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
++|+|||.+++.++++|.-|+.|.-.+..++||..++...+|..|..|.+|++.
T Consensus 210 yra~ydysaqdedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~ 263 (264)
T KOG1702|consen 210 YRAFYDYSAQDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEF 263 (264)
T ss_pred chhhccCcccCcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheee
Confidence 468899999999999999999998888888999999988889999999999863
No 22
>KOG3875|consensus
Probab=98.78 E-value=1.2e-09 Score=60.36 Aligned_cols=58 Identities=34% Similarity=0.572 Sum_probs=48.9
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC-----CCCeEEEEeCCCCcEEEEecCCeeecccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT-----QGDWWLARSKATKQEGYIPSNYVAKLKSI 59 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~-----~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 59 (70)
++|+|||.+.++.|++|++||.+.+..+. .+.||..+.+..+..|++|.+|++.+...
T Consensus 271 arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~rq 333 (362)
T KOG3875|consen 271 ARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGRQ 333 (362)
T ss_pred HHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhcC
Confidence 46889999999999999999999887654 34689998877788999999999987663
No 23
>KOG4348|consensus
Probab=98.77 E-value=9.3e-09 Score=59.35 Aligned_cols=55 Identities=20% Similarity=0.622 Sum_probs=47.3
Q ss_pred CEEEeeccCCCCCCCceecCCCEEEEEEcC--CCCeEEEEeCCCCcEEEEecCCeeecc
Q psy1682 1 IFVALYDYDARTDEDLSFRKGEHLEILNDT--QGDWWLARSKATKQEGYIPSNYVAKLK 57 (70)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~~i~v~~~~--~~~~~~~~~~~~~~~g~~p~~~~~~~~ 57 (70)
+|+++|.|+++.+++|.++.|+++.++.+. +.|||.|.. +|..|.||-+++.-++
T Consensus 263 ycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGEL--nGk~GvFPDNFv~lv~ 319 (627)
T KOG4348|consen 263 YCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGEL--NGKKGVFPDNFVELVQ 319 (627)
T ss_pred heeeeeeecCCCccceeeccccEEEEecccccccceeeeee--cCccccCCchhhhhcC
Confidence 488999999999999999999999877654 458999987 5899999999887654
No 24
>KOG0197|consensus
Probab=98.77 E-value=2.1e-09 Score=62.35 Aligned_cols=68 Identities=60% Similarity=0.974 Sum_probs=58.6
Q ss_pred EEEeeccCCCCCCCceecCCCE-EEEEEcCCCCeEEEEeCCCCcEEEEecCCeeec------ccccCCCCCcCCC
Q psy1682 2 FVALYDYDARTDEDLSFRKGEH-LEILNDTQGDWWLARSKATKQEGYIPSNYVAKL------KSIEAEPYDFKKS 69 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~-i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~------~~~~~~~~~~~~~ 69 (70)
++++|+|.+....+|+|.+|+. ..++...+..||..+....+..|++|++++... ...+..+||+++.
T Consensus 14 ~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~~~~~~~~l~~~~Wf~~~i 88 (468)
T KOG0197|consen 14 VVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARNRGSPAFIKLSDEPWFFGKI 88 (468)
T ss_pred EEEeccccCCCccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeeccccCCCccccccCCchhccc
Confidence 6889999999999999999999 666666678899998876788899999999876 6678889999874
No 25
>KOG4792|consensus
Probab=98.75 E-value=3.7e-09 Score=56.49 Aligned_cols=54 Identities=41% Similarity=0.828 Sum_probs=48.0
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
++++|+|.+.+...|.|++|+++.+..+.+..||..++. .|..|.+|..|++..
T Consensus 127 vr~~fdF~G~deeDLPFkkGeiL~I~~K~eeqWW~Arns-~Gk~GmIPvpYVe~~ 180 (293)
T KOG4792|consen 127 VRALFDFNGNDEEDLPFKKGEILRIRDKPEEQWWNARNS-EGKRGMIPVPYVEKY 180 (293)
T ss_pred eeeeeccCCCccccCCcccCcEEEEecCcHHHhhhhhcc-CCcccceechHHHhh
Confidence 457899999999999999999999999998899999985 588999999888654
No 26
>KOG1029|consensus
Probab=98.66 E-value=1.7e-08 Score=61.56 Aligned_cols=57 Identities=28% Similarity=0.722 Sum_probs=47.9
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC--CCCeEEEEeCCCCcEEEEecCCeeeccccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT--QGDWWLARSKATKQEGYIPSNYVAKLKSIE 60 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~--~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 60 (70)
|+|+|.|++...++++|..||+|.|-... .+||.-|.. .+..||||.+|++.+...+
T Consensus 696 yrAly~FeaRs~dEisf~pGDII~V~esq~aEPGWlaGel--~gktGWFPenyvEki~~~e 754 (1118)
T KOG1029|consen 696 YRALYPFEARSHDEISFEPGDIIIVFESQAAEPGWLAGEL--RGKTGWFPENYVEKIPAVE 754 (1118)
T ss_pred EeeecccccCCcccccccCCCEEEEehhccCCccccccee--ccccCcCcHHHHhhcccCC
Confidence 68999999999999999999999876543 568877776 4889999999998776554
No 27
>KOG0515|consensus
Probab=98.66 E-value=1.2e-08 Score=60.18 Aligned_cols=53 Identities=38% Similarity=0.915 Sum_probs=45.4
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC---CCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT---QGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~---~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
+-|+|||+++..++|+|..||.++|+.+. +..||.++. .++.|+||++|+--.
T Consensus 686 vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~l--ng~eGyVPRnylgLy 741 (752)
T KOG0515|consen 686 VYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARL--NGEEGYVPRNYLGLY 741 (752)
T ss_pred eEEeecccccccccccccCCceeEEEecCCcchhhhhhHhh--cCcccccchhhhhcC
Confidence 46899999999999999999999999875 347999985 589999999988543
No 28
>KOG3655|consensus
Probab=98.54 E-value=2.8e-08 Score=57.52 Aligned_cols=54 Identities=30% Similarity=0.710 Sum_probs=48.2
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
++|+|+|.+.++.+++|..++.|.++...+.+||.+... .|..|+||.+|+..+
T Consensus 430 A~A~~dyqAAddtEisf~p~d~it~Id~vdegww~g~~p-dG~~glfPaNyV~li 483 (484)
T KOG3655|consen 430 ARALYDYQAADDTEISFDPPDAITLIDQVDEGWWTGQGP-DGEVGLFPANYVELI 483 (484)
T ss_pred ccccccccccCCcccccCCccccccccccCCccccccCC-CCCcCcccccccccC
Confidence 578999999999999999999999999888999999875 588999999998643
No 29
>KOG3523|consensus
Probab=98.46 E-value=1.6e-08 Score=60.04 Aligned_cols=56 Identities=20% Similarity=0.513 Sum_probs=49.9
Q ss_pred EEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeeccc
Q psy1682 3 VALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKS 58 (70)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 58 (70)
.+...|.+..+++|.+..+|++.++++..+||..|.....|..||||.+|+.+|.+
T Consensus 612 ~~~~sy~a~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~ 667 (695)
T KOG3523|consen 612 QCVHSYKAKQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITN 667 (695)
T ss_pred heeeccccCCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcC
Confidence 45667999999999999999999999999999999998889999999999987643
No 30
>KOG3601|consensus
Probab=98.43 E-value=1.9e-07 Score=49.37 Aligned_cols=52 Identities=31% Similarity=0.767 Sum_probs=46.4
Q ss_pred EEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 3 VALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
.++|++.++.+.++.+.+++.+.++...+..||.|+.. +..|+||++++...
T Consensus 167 Qa~~df~~~pp~ql~f~~gq~~~v~~~ss~~ww~Gs~l--g~agiFpagyv~p~ 218 (222)
T KOG3601|consen 167 QALYDFQPQPPGQLAFRRGQQIQVLDSSSPFWWFGSKL--GRAGIFPAGYVAPS 218 (222)
T ss_pred hhcCCCCCCCchhhccccCCcceeecCCCcchhhcccc--CceeeecCcccccc
Confidence 46789999999999999999999999999999999874 88999999998653
No 31
>KOG1843|consensus
Probab=98.40 E-value=1.7e-07 Score=53.68 Aligned_cols=52 Identities=40% Similarity=0.829 Sum_probs=45.5
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCC--CCeEEEEeCCCCcEEEEecCCeee
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQ--GDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~--~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
+.++|+|.++....+.|+++|+|.++.+.+ ..||.++. ++..|+||.+|++.
T Consensus 419 a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~--~~~egifPanyv~~ 472 (473)
T KOG1843|consen 419 ATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRG--NGYEGIFPANYVSL 472 (473)
T ss_pred eeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhc--cccccccccceecc
Confidence 578999999999999999999999888764 47999987 58899999999863
No 32
>KOG3775|consensus
Probab=98.21 E-value=1.1e-06 Score=50.20 Aligned_cols=57 Identities=16% Similarity=0.383 Sum_probs=49.1
Q ss_pred EEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecccc
Q psy1682 3 VALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKSI 59 (70)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 59 (70)
++++-|.+.-.++|.+.+|+.+.|....++.|..+.++.+|++|+||+.|...+.-.
T Consensus 266 R~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~ 322 (482)
T KOG3775|consen 266 RAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGP 322 (482)
T ss_pred hhhhhccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCc
Confidence 345667888889999999999999888888999999999999999999998876443
No 33
>KOG4575|consensus
Probab=98.07 E-value=8e-06 Score=49.50 Aligned_cols=56 Identities=30% Similarity=0.699 Sum_probs=46.9
Q ss_pred CEEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 1 IFVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
+++|+|.+.++..+.|.|..||++..+.-.+.-||.+.+....+.|+||++++..+
T Consensus 10 ~vrA~y~w~ge~eGdl~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhcL 65 (874)
T KOG4575|consen 10 MVRALYAWPGEREGDLKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHCL 65 (874)
T ss_pred eEEeeccCCCCcccccceecccceeEEeeccceeeeeeeecccccccCcccceeec
Confidence 36889999999999999999999988777666677777765678899999998664
No 34
>KOG4773|consensus
Probab=97.94 E-value=1.3e-06 Score=49.25 Aligned_cols=57 Identities=21% Similarity=0.486 Sum_probs=49.2
Q ss_pred EEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecccccC
Q psy1682 3 VALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKSIEA 61 (70)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~ 61 (70)
.++++|.+....+|.+..|+++.++.+++.+||.|+.+ +..|++|.+++..+.++.+
T Consensus 179 ~a~~df~gns~~EL~l~agdV~~~~~r~ek~W~~gk~R--~~~g~yp~sF~~~ld~fpe 235 (386)
T KOG4773|consen 179 EASFDFPGNSKLELNLVAGDVEFLLSRDEKYWLLGKVR--GLTGYYPDSFVKQLDDFPE 235 (386)
T ss_pred HhhccCCCCccceeeeehhhHHHHHhhcccceeeeeec--cccccccHHhhhhhccCcc
Confidence 35678999999999999999999999999999999884 7789999999988766554
No 35
>KOG3557|consensus
Probab=97.90 E-value=2.1e-06 Score=51.71 Aligned_cols=56 Identities=41% Similarity=0.846 Sum_probs=47.3
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecccc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKSI 59 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~ 59 (70)
+++.|||.+....+|+..+++++.++... ..||.+++. .++.|++|++++..++..
T Consensus 503 ~~~~Ydf~arNs~ELsV~k~E~LEvl~d~-R~WW~~kn~-~G~~GyvP~nIL~~~~~~ 558 (721)
T KOG3557|consen 503 VLVLYDFQARNSSELSVKKGEVLEVLDDG-RKWWKVKNG-HGRAGYVPSNILAPLQPE 558 (721)
T ss_pred eeeehhhhcccchhhhhhhhhhhhhhhcc-ccceeccCc-cCCCCCcchhhhccCCCc
Confidence 56789999999999999999999877654 479999986 488999999998876543
No 36
>KOG0609|consensus
Probab=97.82 E-value=5.7e-06 Score=48.98 Aligned_cols=54 Identities=35% Similarity=0.770 Sum_probs=42.7
Q ss_pred EEEeeccCCCCCC-------CceecCCCEEEEEEcCCCCeEEEEeCC---CCcEEEEecCCeee
Q psy1682 2 FVALYDYDARTDE-------DLSFRKGEHLEILNDTQGDWWLARSKA---TKQEGYIPSNYVAK 55 (70)
Q Consensus 2 ~~~~~~~~~~~~~-------~l~~~~~~~i~v~~~~~~~~~~~~~~~---~~~~g~~p~~~~~~ 55 (70)
++|+|||.+..+. .+.|++||++.++.+.+..||+++... ....|.+|+.....
T Consensus 217 vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qe 280 (542)
T KOG0609|consen 217 VRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQE 280 (542)
T ss_pred ehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHH
Confidence 5788999886654 599999999999999999999998763 24568888865543
No 37
>KOG2996|consensus
Probab=97.62 E-value=4e-05 Score=46.39 Aligned_cols=55 Identities=24% Similarity=0.541 Sum_probs=42.4
Q ss_pred CCceecCCCEEEEEEcC-CCCeEEEEeCCCCcEEEEecCCeeecc-----------cccCCCCCcCC
Q psy1682 14 EDLSFRKGEHLEILNDT-QGDWWLARSKATKQEGYIPSNYVAKLK-----------SIEAEPYDFKK 68 (70)
Q Consensus 14 ~~l~~~~~~~i~v~~~~-~~~~~~~~~~~~~~~g~~p~~~~~~~~-----------~~~~~~~~~~~ 68 (70)
..|.++.|+++.++..+ ...||.++...++.+|+||++.+.+-. +....+||+|+
T Consensus 625 P~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~~~d~s~~~WyaG~ 691 (865)
T KOG2996|consen 625 PRLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYVPTDYSEFPWYAGE 691 (865)
T ss_pred CceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCCCCCCCCCCccchhhhhhhcch
Confidence 45889999999877654 557999999888889999998876532 23566899885
No 38
>KOG2222|consensus
Probab=97.58 E-value=9.4e-06 Score=48.12 Aligned_cols=51 Identities=25% Similarity=0.624 Sum_probs=43.7
Q ss_pred EEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 3 VALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
+|+.||...+.++|-|.++++|.++...+.-.|-|.. +|-+||||..+++.
T Consensus 552 kal~df~r~dddelgfrkndiitiisekdehcwvgel--nglrgwfpakfvel 602 (848)
T KOG2222|consen 552 KALHDFAREDDDELGFRKNDIITIISEKDEHCWVGEL--NGLRGWFPAKFVEL 602 (848)
T ss_pred HHHhhhhhccccccccccccEEEEeecCCcceeeecc--ccccccchHHHHHH
Confidence 5677899899999999999999998887778888887 58899999877754
No 39
>KOG3632|consensus
Probab=97.57 E-value=0.00015 Score=46.18 Aligned_cols=58 Identities=36% Similarity=0.709 Sum_probs=45.1
Q ss_pred CEEEeeccCCCC--------CCCceecCCCEEEEEEcC-CCCeEEEEeCCCCcEEEEecCCeeeccccc
Q psy1682 1 IFVALYDYDART--------DEDLSFRKGEHLEILNDT-QGDWWLARSKATKQEGYIPSNYVAKLKSIE 60 (70)
Q Consensus 1 ~~~~~~~~~~~~--------~~~l~~~~~~~i~v~~~~-~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 60 (70)
+++|+|||.+.. ..+|.|++|++|.|+... .++++.+.. +++.|.+|.++|.++....
T Consensus 1140 ifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~--ngr~GlIPcNmvae~~vd~ 1206 (1335)
T KOG3632|consen 1140 IFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGEL--NGRRGLIPCNMVAEQPVDN 1206 (1335)
T ss_pred eeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeeccc--ccccccccccccccccCCc
Confidence 368999998621 137999999999998754 468888876 5889999999998865443
No 40
>KOG2528|consensus
Probab=97.48 E-value=7.2e-05 Score=43.75 Aligned_cols=55 Identities=25% Similarity=0.528 Sum_probs=46.4
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC-CCCeEEEEeCCCCcEEEEecCCeeecc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT-QGDWWLARSKATKQEGYIPSNYVAKLK 57 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~-~~~~~~~~~~~~~~~g~~p~~~~~~~~ 57 (70)
.+++|+|......+++...++++.+.... ..+|+.+.+. .+..|.||..|++.+.
T Consensus 5 ~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Ns-rge~GlfPa~yVeV~~ 60 (490)
T KOG2528|consen 5 ARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNS-RGERGLFPASYVEVTR 60 (490)
T ss_pred hhhhcchhhcccccccccccceeeecCcccccccccCCCc-cCccCCCcccceeeec
Confidence 46899999989999999999999887765 5689888874 5889999999998764
No 41
>KOG0199|consensus
Probab=97.41 E-value=0.00055 Score=42.82 Aligned_cols=49 Identities=22% Similarity=0.492 Sum_probs=40.7
Q ss_pred eccCCCCCCCceecCCCEEEEEEcCC-CCeEEEEeCCCCcEEEEecCCee
Q psy1682 6 YDYDARTDEDLSFRKGEHLEILNDTQ-GDWWLARSKATKQEGYIPSNYVA 54 (70)
Q Consensus 6 ~~~~~~~~~~l~~~~~~~i~v~~~~~-~~~~~~~~~~~~~~g~~p~~~~~ 54 (70)
-++...+++.|.+++||.|.|++... ..||.+.+..+.+.|.||.+-+.
T Consensus 381 ~~~d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt 430 (1039)
T KOG0199|consen 381 ETYDSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVT 430 (1039)
T ss_pred eeccccCCCceeeccCCeEEEEecCCccceeeccccccceecccCcceee
Confidence 34556688899999999999988764 46999998888999999987776
No 42
>KOG4792|consensus
Probab=97.24 E-value=0.0013 Score=35.88 Aligned_cols=45 Identities=13% Similarity=0.225 Sum_probs=38.3
Q ss_pred CCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeeccc
Q psy1682 12 TDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLKS 58 (70)
Q Consensus 12 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~ 58 (70)
++..|.++.|+++.|++....+-|.+.. +|+.|.||..|+.-...
T Consensus 242 DkTaL~levGdiVkVTk~ninGqwegEl--nGk~G~fPfThvrf~d~ 286 (293)
T KOG4792|consen 242 DKTALALEVGDIVKVTKKNINGQWEGEL--NGKIGHFPFTHVRFTDV 286 (293)
T ss_pred ChhhhhhhcCcEEEEEeeccCceeeeee--cCccccccceeEEeecc
Confidence 4456999999999999998889999988 58999999999976543
No 43
>KOG3771|consensus
Probab=96.95 E-value=0.00045 Score=40.66 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=37.9
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCC-CCeEEEEeCCCCcEEEEecCCe
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQ-GDWWLARSKATKQEGYIPSNYV 53 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~-~~~~~~~~~~~~~~g~~p~~~~ 53 (70)
+.++++|...+.++|+|+.|++|.++...+ ..||.|+.+ +..+-++.+++
T Consensus 403 v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~m--g~ke~~~~~~~ 453 (460)
T KOG3771|consen 403 VKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGWLM--GVKESDWNGLF 453 (460)
T ss_pred eeccccccccccccccccCCCEEEEecCCCccchhhHHHh--hhcccccccce
Confidence 567899999999999999999998887543 468888764 44444455554
No 44
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=96.76 E-value=0.0071 Score=28.22 Aligned_cols=44 Identities=27% Similarity=0.431 Sum_probs=29.5
Q ss_pred CCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecc
Q psy1682 13 DEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLK 57 (70)
Q Consensus 13 ~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 57 (70)
.-.|.+.+|+.+.|++..+..-|.+++. .|+-|+++.+++-+..
T Consensus 30 ~kDLpi~~GE~LeVI~~t~~~kvlCRN~-~GKYGYV~~~~L~~~d 73 (89)
T PF14603_consen 30 GKDLPIKPGEILEVIQFTDDNKVLCRNS-EGKYGYVLRSHLLPLD 73 (89)
T ss_dssp TTB----TT-B-EEEEESSSSEEEEEET-TTEEEEEEGGGS----
T ss_pred cccCCcCCCCEEEEEEeCCCCeEEEeCC-CCceeEEEHHHccCCC
Confidence 4569999999999999988889999986 5888999998885543
No 45
>KOG1451|consensus
Probab=96.54 E-value=0.0037 Score=38.37 Aligned_cols=50 Identities=32% Similarity=0.593 Sum_probs=38.2
Q ss_pred eeccCCCCCCCceecCCCEEEEEE-cCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 5 LYDYDARTDEDLSFRKGEHLEILN-DTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 5 ~~~~~~~~~~~l~~~~~~~i~v~~-~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
+|.-.+....++++..|.++.-.. ...+||..|+. +|..|++|++|++++
T Consensus 762 lyAc~a~h~selsf~~gt~f~nv~~S~e~Gwl~GtL--nGktglip~nyve~l 812 (812)
T KOG1451|consen 762 LYACTADHHSELSFEPGTIFTNVYESNEDGWLVGTL--NGKTGLIPSNYVEPL 812 (812)
T ss_pred eeccCCCCcccccccCcceeeeecccCCCCceeeec--CCCcccCcccccCcC
Confidence 444455566789999999887555 45678988887 589999999999753
No 46
>KOG4429|consensus
Probab=96.32 E-value=0.00095 Score=37.63 Aligned_cols=52 Identities=15% Similarity=0.143 Sum_probs=41.3
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
|.+.|+|....+++|...+|++.........+||.|+.. +.-+-||..++.+
T Consensus 366 cdafYSfqarqddel~~e~gditif~Ekkeeg~~f~rl~--gd~~hf~Aa~iEe 417 (421)
T KOG4429|consen 366 CDAFYSFQARQDDELGGEIGDITIFDEKKEEGPTFCRLL--GDFEHFHAAEIEE 417 (421)
T ss_pred hhhhhccccccccccCCcccceeeecCcccCCCceeeec--cccCCCcHHHHHH
Confidence 567888999889999999999876666667899999984 5666677776654
No 47
>KOG3812|consensus
Probab=96.27 E-value=0.0019 Score=37.21 Aligned_cols=48 Identities=31% Similarity=0.610 Sum_probs=35.1
Q ss_pred EEeeccCCCCC-------CCceecCCCEEEEEEcCCCCeEEEEeCCCCc-EEEEec
Q psy1682 3 VALYDYDARTD-------EDLSFRKGEHLEILNDTQGDWWLARSKATKQ-EGYIPS 50 (70)
Q Consensus 3 ~~~~~~~~~~~-------~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~-~g~~p~ 50 (70)
.+..+|.+.-+ ..++|...+.+.+-.+-+..||+|+....++ -||+|+
T Consensus 62 ~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPs 117 (475)
T KOG3812|consen 62 RTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPS 117 (475)
T ss_pred EeccccCCccCCCCCCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccc
Confidence 34556665432 3588999999988888888999998765554 588886
No 48
>KOG3725|consensus
Probab=96.22 E-value=0.001 Score=36.89 Aligned_cols=51 Identities=27% Similarity=0.588 Sum_probs=41.4
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC--CCCeEEEEeCCCCcEEEEecCCee
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT--QGDWWLARSKATKQEGYIPSNYVA 54 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~--~~~~~~~~~~~~~~~g~~p~~~~~ 54 (70)
++++|||.+..+.++++-.+++|.|..-. +..|..+.. .+..|-+|..|++
T Consensus 320 ArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgEr--GnkkGKvPvtYlE 372 (375)
T KOG3725|consen 320 ARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGER--GNKKGKVPVTYLE 372 (375)
T ss_pred eeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhhh--cCCCCCcchhHHH
Confidence 57899999999999999999999887644 557877766 4677888988875
No 49
>KOG3601|consensus
Probab=96.20 E-value=0.00068 Score=36.35 Aligned_cols=50 Identities=40% Similarity=0.672 Sum_probs=37.2
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCC-CeEEEEeCCCCcEEEEecCCe
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQG-DWWLARSKATKQEGYIPSNYV 53 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~-~~~~~~~~~~~~~g~~p~~~~ 53 (70)
+++++++.....++|+|.+|+.+.++...+. .|.+... .+..|++|+++.
T Consensus 3 a~a~n~f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ael--~g~~g~~P~Nai 53 (222)
T KOG3601|consen 3 AVAKNDFLAGIRDELSFLKGDNLKILNMEDDINWYKAEL--DGPEGFIPKNAI 53 (222)
T ss_pred hhhhhhhhhcCcccceeecCCceEecchHHhhhhhhHhh--cCccccCccccc
Confidence 3567888888899999999999877665432 4655544 477788888776
No 50
>KOG3705|consensus
Probab=95.87 E-value=0.011 Score=34.89 Aligned_cols=54 Identities=17% Similarity=0.343 Sum_probs=42.9
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
.+++++..+....++.++.||.+.+....-+|.-.|.+...++.|.||+--+.+
T Consensus 512 ~ivi~aH~prt~~ei~l~vGD~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvre 565 (580)
T KOG3705|consen 512 VIVIEAHIPRTNKEIDLKVGDKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVRE 565 (580)
T ss_pred eEEEEecCCCcccccCcccCCeeeecccccccccccccccccccCCCccceeee
Confidence 466778888888999999999998877655666677777778899999866554
No 51
>KOG3565|consensus
Probab=95.78 E-value=0.0013 Score=40.46 Aligned_cols=56 Identities=23% Similarity=0.599 Sum_probs=44.9
Q ss_pred EEEeeccCCCCCCCceecCCCEEEEEEcC-CCCeEEEEeCCCCcEEEEecCCeeecc
Q psy1682 2 FVALYDYDARTDEDLSFRKGEHLEILNDT-QGDWWLARSKATKQEGYIPSNYVAKLK 57 (70)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~i~v~~~~-~~~~~~~~~~~~~~~g~~p~~~~~~~~ 57 (70)
+.+++.|.+..++.+++..|+++.++... +++|-.++....+..|.+|.+|+....
T Consensus 581 ~~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~ 637 (640)
T KOG3565|consen 581 SKALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVTE 637 (640)
T ss_pred eecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCcccccccc
Confidence 56788999999999999999998877765 557877774456788999999987543
No 52
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=95.01 E-value=0.1 Score=21.75 Aligned_cols=38 Identities=24% Similarity=0.634 Sum_probs=27.8
Q ss_pred ceecCCCEEEEEEcCCCC-eEEEEeCCCCcEEEEecCCee
Q psy1682 16 LSFRKGEHLEILNDTQGD-WWLARSKATKQEGYIPSNYVA 54 (70)
Q Consensus 16 l~~~~~~~i~v~~~~~~~-~~~~~~~~~~~~g~~p~~~~~ 54 (70)
-.+..|+.+.++...... |.+.... .+..||++..+++
T Consensus 17 ~~l~~g~~v~v~~~~~~~~W~~V~~~-~g~~GwV~~~~l~ 55 (55)
T PF08239_consen 17 GQLPKGEKVTVLGESGDGNWYKVRTY-DGKTGWVSSSYLS 55 (55)
T ss_dssp EEEETTSEEEEEEEETT--EEEEEEE-TTEEEEEEGGCEE
T ss_pred EEEeCCCEEEEEEEcCCcEEEEEECc-CCcEEEEEccccC
Confidence 556888999888876554 8888443 4778999988863
No 53
>KOG3632|consensus
Probab=93.73 E-value=0.18 Score=33.31 Aligned_cols=58 Identities=22% Similarity=0.497 Sum_probs=43.5
Q ss_pred EEEeeccCCC------CCCCceecCCCEEEEEEcC-CCCeEEEEeCCCCcEEEEecCCeeeccccc
Q psy1682 2 FVALYDYDAR------TDEDLSFRKGEHLEILNDT-QGDWWLARSKATKQEGYIPSNYVAKLKSIE 60 (70)
Q Consensus 2 ~~~~~~~~~~------~~~~l~~~~~~~i~v~~~~-~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 60 (70)
+.+.|+|.+- ...+|.+..|+.|++.... .+++..+... .++.|.+|++++..+.+..
T Consensus 450 ~~arySynPFegpNenpeaelpltAg~yiYiyGdmdEdgfyegeL~-dgrrglvPsnFVe~v~d~~ 514 (1335)
T KOG3632|consen 450 FTARYSYNPFEGPNENPEAELPLTAGYYIYIYGDMDEDGFYEGELR-DGRRGLVPSNFVEVVTDTK 514 (1335)
T ss_pred EEEEEeccCCcCCCCCCccccccccceEEEEecCCCccccceeeee-cccccCCCchheEEeccch
Confidence 5677777651 2236999999999988754 4578888875 4889999999998775543
No 54
>PRK10884 SH3 domain-containing protein; Provisional
Probab=93.61 E-value=0.27 Score=26.63 Aligned_cols=40 Identities=15% Similarity=0.302 Sum_probs=30.7
Q ss_pred ceecCCCEEEEEEcCC-CCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 16 LSFRKGEHLEILNDTQ-GDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 16 l~~~~~~~i~v~~~~~-~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
-.+..|+.+.++...+ .+|...+.. .+..||++..++...
T Consensus 48 ~~l~~G~~v~vl~~~~~~~w~~Vr~~-~G~~GWV~~~~Ls~~ 88 (206)
T PRK10884 48 GTLNAGEEVTLLQVNANTNYAQIRDS-KGRTAWIPLKQLSTT 88 (206)
T ss_pred EEEcCCCEEEEEEEcCCCCEEEEEeC-CCCEEeEEHHHhcCC
Confidence 4577899888887665 578888764 588999999887643
No 55
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=91.03 E-value=0.67 Score=19.66 Aligned_cols=37 Identities=27% Similarity=0.538 Sum_probs=26.8
Q ss_pred ceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCe
Q psy1682 16 LSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYV 53 (70)
Q Consensus 16 l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~ 53 (70)
-.+..|+.+.++.....+|...+.. .+..||++..++
T Consensus 25 ~~l~~g~~v~i~~~~~~~W~~v~~~-~g~~Gwi~~~~~ 61 (63)
T smart00287 25 GTLKKGDKVKVLGVDGQDWAKITYG-SGQRGYVPGYVV 61 (63)
T ss_pred EEecCCCEEEEEEccCCceEEEEcC-CCCEEEEEeeee
Confidence 4577899888887665478887753 478999976543
No 56
>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.
Probab=89.51 E-value=0.93 Score=18.91 Aligned_cols=35 Identities=14% Similarity=0.527 Sum_probs=24.8
Q ss_pred ceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCe
Q psy1682 16 LSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYV 53 (70)
Q Consensus 16 l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~ 53 (70)
..+..|..+.+. ....+|...+. .+..||++...+
T Consensus 19 ~~l~~g~~v~v~-~~~~~W~~V~~--~g~~GWv~~~~l 53 (55)
T PF06347_consen 19 ARLEPGVPVRVI-ECRGGWCKVRA--DGRTGWVHKSLL 53 (55)
T ss_pred EEECCCCEEEEE-EccCCeEEEEE--CCeEEeEEeeec
Confidence 456677776665 44567888883 588999988654
No 57
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=87.11 E-value=3.3 Score=25.50 Aligned_cols=39 Identities=13% Similarity=0.420 Sum_probs=29.7
Q ss_pred ceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeee
Q psy1682 16 LSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 16 l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
-.+..|+.+.++.....+|++.... .|..||+-..|+..
T Consensus 103 gsl~~G~~V~Vl~~~~ngW~kI~~~-~GktGwV~~~YLs~ 141 (481)
T PRK13914 103 TSIKGGTKVTVETTESNGWHKITYN-DGKTGFVNGKYLTD 141 (481)
T ss_pred eeecCCCEEEEeecccCCeEEEEcC-CCCEEEEecccccC
Confidence 4577899988876445689888763 47899998888864
No 58
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=84.84 E-value=2.1 Score=18.14 Aligned_cols=24 Identities=29% Similarity=0.868 Sum_probs=18.4
Q ss_pred eecCCCEEEEEEcCCCCeEEEEeC
Q psy1682 17 SFRKGEHLEILNDTQGDWWLARSK 40 (70)
Q Consensus 17 ~~~~~~~i~v~~~~~~~~~~~~~~ 40 (70)
.++.|+.+.+....++.||.+...
T Consensus 2 ~~~~G~~Ve~~~~~~~~W~~a~V~ 25 (61)
T smart00743 2 DFKKGDRVEVFSKEEDSWWEAVVT 25 (61)
T ss_pred CcCCCCEEEEEECCCCEEEEEEEE
Confidence 467889988877667789988653
No 59
>KOG0040|consensus
Probab=83.14 E-value=0.0082 Score=40.58 Aligned_cols=53 Identities=34% Similarity=0.907 Sum_probs=43.1
Q ss_pred EEeeccCCCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeecc
Q psy1682 3 VALYDYDARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKLK 57 (70)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 57 (70)
.++|+|...++.+...++|+++.++......||.++.. .+.|++|..|+..+.
T Consensus 972 ~alyd~q~kSprev~mKkgDvltll~s~nkdwwkve~~--d~qg~vpa~yvk~~~ 1024 (2399)
T KOG0040|consen 972 LALYDYQEKSPREVTMKKGDVLTLLNSINKDWWKVEVN--DRQGFVPAAYVKRLD 1024 (2399)
T ss_pred HHHHHHHhcCHHHHHHhhhhHHHHHhhcccccccchhh--hhcCcchHHHHHHhc
Confidence 35788888888889999999988777777889999874 567899998886543
No 60
>COG3103 SH3 domain protein [Signal transduction mechanisms]
Probab=74.12 E-value=12 Score=20.47 Aligned_cols=39 Identities=21% Similarity=0.428 Sum_probs=29.4
Q ss_pred ceecCCCEEEEEEcCCC-CeEEEEeCCCCcEEEEecCCeee
Q psy1682 16 LSFRKGEHLEILNDTQG-DWWLARSKATKQEGYIPSNYVAK 55 (70)
Q Consensus 16 l~~~~~~~i~v~~~~~~-~~~~~~~~~~~~~g~~p~~~~~~ 55 (70)
=+++.|+.+.++..... +|.+.+.. .+..||++...+..
T Consensus 48 ~~i~~Ge~vtvl~~~~~~~~~qI~~~-~g~t~wi~~~~lt~ 87 (205)
T COG3103 48 GSIKAGEKVTVLGTDGNTGYYQIRDS-SGRTGWILSKNLTS 87 (205)
T ss_pred eEecCCcEEEEEEEcCcccEEEEEec-CCceEEEechhhcc
Confidence 45778999988887654 67777764 58899998866654
No 61
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=65.48 E-value=13 Score=17.10 Aligned_cols=24 Identities=25% Similarity=0.828 Sum_probs=15.6
Q ss_pred ceecCCCEEEEEEcC------CCCeEEEEe
Q psy1682 16 LSFRKGEHLEILNDT------QGDWWLARS 39 (70)
Q Consensus 16 l~~~~~~~i~v~~~~------~~~~~~~~~ 39 (70)
|.++.|+.+.+.... +..||-|..
T Consensus 4 L~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V 33 (75)
T PF11302_consen 4 LSVKPGDTVIVQDEQEVGQKQDKDWWMGQV 33 (75)
T ss_pred cccCCCCEEEEecCccccccCCCCcEEEEE
Confidence 667788887554322 457998764
No 62
>KOG3580|consensus
Probab=62.56 E-value=23 Score=23.14 Aligned_cols=52 Identities=23% Similarity=0.445 Sum_probs=34.1
Q ss_pred EEeeccCCCCCCCceecCCCEEEEEEcC---CCCeEEEEeCC----CCcEEEEecCCee
Q psy1682 3 VALYDYDARTDEDLSFRKGEHLEILNDT---QGDWWLARSKA----TKQEGYIPSNYVA 54 (70)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~~i~v~~~~---~~~~~~~~~~~----~~~~g~~p~~~~~ 54 (70)
+..|.+++..+..|.|.+|+++.+++.. ..+-|...... .-..|++|.....
T Consensus 508 RtHFE~Eke~P~gL~FtrGeVFrvvDTLy~GklG~WLAvRiG~dlrE~ErGiIPNksRA 566 (1027)
T KOG3580|consen 508 RTHFECEKETPQGLAFTRGEVFRVVDTLYDGKLGNWLAVRIGNDLRELERGIIPNKSRA 566 (1027)
T ss_pred eeeeeecCCCCccccccccceeeeeecccCCCCcceEEEeecccHHHHhcccCCCccHH
Confidence 4456778888899999999999887643 22334444321 2246888875443
No 63
>PF15172 Prolactin_RP: Prolactin-releasing peptide
Probab=50.62 E-value=13 Score=15.35 Aligned_cols=15 Identities=7% Similarity=0.472 Sum_probs=7.4
Q ss_pred ecccccCCC-CCcCCC
Q psy1682 55 KLKSIEAEP-YDFKKS 69 (70)
Q Consensus 55 ~~~~~~~~~-~~~~~~ 69 (70)
++.+.+.+| ||.|.+
T Consensus 9 e~R~PdIdP~WY~gRg 24 (47)
T PF15172_consen 9 EIRTPDIDPAWYVGRG 24 (47)
T ss_pred cccCCCCCchheeccc
Confidence 334444444 666653
No 64
>PF12913 SH3_6: SH3 domain of the SH3b1 type; PDB: 3M1U_B.
Probab=42.97 E-value=31 Score=14.73 Aligned_cols=33 Identities=18% Similarity=0.444 Sum_probs=19.1
Q ss_pred ceecCCCEEEEEEcCCC-CeEEEEeCCCCcEEEEec
Q psy1682 16 LSFRKGEHLEILNDTQG-DWWLARSKATKQEGYIPS 50 (70)
Q Consensus 16 l~~~~~~~i~v~~~~~~-~~~~~~~~~~~~~g~~p~ 50 (70)
-.+..|+-+.++..+.+ .|..+.. ....||+++
T Consensus 21 s~l~~gtPv~i~H~S~D~~W~fV~t--~~~~GWV~s 54 (54)
T PF12913_consen 21 SALHPGTPVYILHTSRDGAWAFVQT--PFYSGWVKS 54 (54)
T ss_dssp EEE-TT-EEEEEEE-TTSSEEEEE---SS-EEEEEG
T ss_pred cccCCCCCEEEEEECCCCCEEEEec--CCeeEeeeC
Confidence 45667888888876644 5666665 467888864
No 65
>KOG4384|consensus
Probab=35.83 E-value=28 Score=20.84 Aligned_cols=45 Identities=20% Similarity=0.396 Sum_probs=31.4
Q ss_pred CCCCCCceecCCCEEEEEEcCCCCeEEEEeCCCCcEEEEecCCeeec
Q psy1682 10 ARTDEDLSFRKGEHLEILNDTQGDWWLARSKATKQEGYIPSNYVAKL 56 (70)
Q Consensus 10 ~~~~~~l~~~~~~~i~v~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~ 56 (70)
+.+.+++.++.++++.++.....+-|.+-. .+..|.|+-.++..+
T Consensus 149 p~~~d~lk~~~~~~i~~~~~~~~~~~~g~~--~~kv~~f~~~~v~~~ 193 (361)
T KOG4384|consen 149 PYDTDSLKIKKGDIIDIIEKPPMGTWLGLL--NNKVGSFKFIYVDVI 193 (361)
T ss_pred cccccchhhcccchhhccccCccccccccc--cCcccccccceeccc
Confidence 356678889999998888777666676654 366676766666543
No 66
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=26.82 E-value=1.8e+02 Score=18.80 Aligned_cols=25 Identities=16% Similarity=0.492 Sum_probs=19.0
Q ss_pred CCeEEEEeCCCCcEEEEecCCeeecc
Q psy1682 32 GDWWLARSKATKQEGYIPSNYVAKLK 57 (70)
Q Consensus 32 ~~~~~~~~~~~~~~g~~p~~~~~~~~ 57 (70)
..|.+... .+|..||+...++.+..
T Consensus 391 ~~~~~~~~-~~~~~~~~~~~~~~~~~ 415 (549)
T PRK13545 391 VEWIQITL-SNGEIGWISTKFIEPFK 415 (549)
T ss_pred cceEEEEe-cCCccceeeeeeeeecc
Confidence 36777665 46899999998888754
No 67
>PF05641 Agenet: Agenet domain; InterPro: IPR008395 This domain is related to the TUDOR domain IPR008191 from INTERPRO []. The function of the agenet domain is unknown. This signature matches one of the two Agenet domains in the FMR proteins [].; GO: 0003723 RNA binding; PDB: 2BKD_N 3O8V_A 3KUF_A 3H8Z_A.
Probab=26.09 E-value=72 Score=13.87 Aligned_cols=22 Identities=36% Similarity=0.884 Sum_probs=11.2
Q ss_pred ecCCCEEEEEEcCC---CCeEEEEe
Q psy1682 18 FRKGEHLEILNDTQ---GDWWLARS 39 (70)
Q Consensus 18 ~~~~~~i~v~~~~~---~~~~~~~~ 39 (70)
|++|+.+.+....+ ..|+.+..
T Consensus 1 F~~G~~VEV~s~e~g~~gaWf~a~V 25 (68)
T PF05641_consen 1 FKKGDEVEVSSDEDGFRGAWFPATV 25 (68)
T ss_dssp --TT-EEEEEE-SBTT--EEEEEEE
T ss_pred CCCCCEEEEEEcCCCCCcEEEEEEE
Confidence 56788888776542 34666654
No 68
>KOG1314|consensus
Probab=24.77 E-value=73 Score=19.40 Aligned_cols=41 Identities=20% Similarity=0.485 Sum_probs=26.0
Q ss_pred CCCCceecCCCEEEEEEcCCCCeEEEEe---------CCCCcEEEEecCCe
Q psy1682 12 TDEDLSFRKGEHLEILNDTQGDWWLARS---------KATKQEGYIPSNYV 53 (70)
Q Consensus 12 ~~~~l~~~~~~~i~v~~~~~~~~~~~~~---------~~~~~~g~~p~~~~ 53 (70)
++..++++++|.|.+.... ..|..+.. ..+.-+||||+...
T Consensus 330 ddprisL~p~d~i~~tr~~-~~wlyg~~~l~e~~~E~~~rkiRgwfP~~~a 379 (414)
T KOG1314|consen 330 DDPRISLPPGDGIKATRGF-NHWLYGEEILSEMFNESRERKIRGWFPRNCA 379 (414)
T ss_pred CCcccccCCCcceeeeeee-ecccchhhhhhHHHhhcchhhhccccccccc
Confidence 4456899999998766543 35555521 11235799998773
No 69
>PF07828 PA-IL: PA-IL-like protein; InterPro: IPR012905 The members of this family are similar to the galactophilic lectin-1 expressed by Pseudomonas aeruginosa (PA-IL, Q05097 from SWISSPROT). Lectins recognising specific carbohydrates found on the surface of host cells are known to be involved in the initiation of infections by this organism. The protein is thought to be organised into an extensive network of beta-sheets, as is the case with many other lectins []. ; PDB: 3ZYB_E 3ZYF_C 1L7L_A 3ZYH_A.
Probab=20.46 E-value=1.2e+02 Score=15.35 Aligned_cols=14 Identities=21% Similarity=0.529 Sum_probs=10.0
Q ss_pred CceecCCCEEEEEE
Q psy1682 15 DLSFRKGEHLEILN 28 (70)
Q Consensus 15 ~l~~~~~~~i~v~~ 28 (70)
-|.+++||+|+++-
T Consensus 17 Gl~lk~GD~IsIvA 30 (121)
T PF07828_consen 17 GLILKAGDIISIVA 30 (121)
T ss_dssp EEEE-TT-EEEEEE
T ss_pred eEEEcCCCEEEEEE
Confidence 48899999998765
Done!