Your job contains 1 sequence.
>psy16824
MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG
KPSKWWLCFSKKRFMDKSLTALGQS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16824
(85 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038369 - symbol:Arpc3A "Actin-related protein 2/3... 332 4.9e-30 1
FB|FBgn0065032 - symbol:Arpc3B "Actin-related protein 2/3... 295 4.0e-26 1
ZFIN|ZDB-GENE-040625-107 - symbol:arpc3 "actin related pr... 293 6.6e-26 1
UNIPROTKB|E1C8Y3 - symbol:ARPC3 "Uncharacterized protein"... 288 2.2e-25 1
MGI|MGI:1928375 - symbol:Arpc3 "actin related protein 2/3... 288 2.2e-25 1
UNIPROTKB|Q3T035 - symbol:ARPC3 "Actin-related protein 2/... 285 4.6e-25 1
UNIPROTKB|E2R985 - symbol:E2R985 "Uncharacterized protein... 285 4.6e-25 1
UNIPROTKB|O15145 - symbol:ARPC3 "Actin-related protein 2/... 285 4.6e-25 1
UNIPROTKB|B5APU8 - symbol:ARPC3 "Uncharacterized protein"... 285 4.6e-25 1
RGD|1311985 - symbol:Arpc3 "actin related protein 2/3 com... 283 7.6e-25 1
UNIPROTKB|J9P309 - symbol:LOC100856747 "Uncharacterized p... 278 2.6e-24 1
UNIPROTKB|G3N230 - symbol:G3N230 "Uncharacterized protein... 257 4.3e-22 1
WB|WBGene00000203 - symbol:arx-5 species:6239 "Caenorhabd... 248 3.9e-21 1
POMBASE|SPBC1778.08c - symbol:arc3 "ARP2/3 actin-organizi... 240 2.7e-20 1
SGD|S000004362 - symbol:ARC18 "Subunit of the ARP2/3 comp... 215 1.2e-17 1
CGD|CAL0003027 - symbol:ARC18 species:5476 "Candida albic... 213 2.0e-17 1
UNIPROTKB|Q59WT0 - symbol:ARC18 "Potential Arp2/3 complex... 213 2.0e-17 1
UNIPROTKB|G4ND09 - symbol:MGG_00307 "ARP2/3 complex 21 kD... 212 2.5e-17 1
DICTYBASE|DDB_G0292804 - symbol:arcC "actin related prote... 209 5.3e-17 1
TAIR|locus:2195633 - symbol:ARPC3 "AT1G60430" species:370... 191 4.2e-15 1
ASPGD|ASPL0000013407 - symbol:AN8065 species:162425 "Emer... 184 2.3e-14 1
>FB|FBgn0038369 [details] [associations]
symbol:Arpc3A "Actin-related protein 2/3 complex, subunit 3A"
species:7227 "Drosophila melanogaster" [GO:0003779 "actin binding"
evidence=ISS] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=ISS] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=ISS] InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315
EMBL:AE014297 GO:GO:0003779 GO:GO:0005856 GO:GO:0030833
GeneTree:ENSGT00390000018018 KO:K05756 OMA:FRTYEIK
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060
UniGene:Dm.24067 GeneID:41917 KEGG:dme:Dmel_CG4560 CTD:41917
FlyBase:FBgn0038369 GenomeRNAi:41917 NextBio:826261 EMBL:BT132882
RefSeq:NP_650498.3 SMR:Q9VF28 STRING:Q9VF28
EnsemblMetazoa:FBtr0300570 UCSC:CG4560-RB InParanoid:Q9VF28
Uniprot:Q9VF28
Length = 177
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 58/84 (69%), Positives = 72/84 (85%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MYSLA++KFD+PG+AGFPLN+VYAKPQ+ +ADLM+ YL Q+R ETG RV E+VFNT DG
Sbjct: 94 MYSLAISKFDIPGDAGFPLNAVYAKPQTAQDADLMRQYLLQLRHETGNRVLEKVFNTEDG 153
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KP+KWW CF+KK+FM+KSL GQ
Sbjct: 154 KPNKWWTCFAKKKFMEKSLAGPGQ 177
>FB|FBgn0065032 [details] [associations]
symbol:Arpc3B "Actin-related protein 2/3 complex, subunit 3B"
species:7227 "Drosophila melanogaster" [GO:0007015 "actin filament
organization" evidence=NAS] [GO:0005200 "structural constituent of
cytoskeleton" evidence=ISS;NAS] [GO:0005885 "Arp2/3 protein
complex" evidence=ISS;NAS] [GO:0003779 "actin binding"
evidence=ISS] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=ISS] InterPro:IPR007204 Pfam:PF04062
PIRSF:PIRSF016315 GO:GO:0003779 GO:GO:0005856 EMBL:AE014298
GO:GO:0030833 GeneTree:ENSGT00390000018018 KO:K05756
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060 OMA:KWWICFA
UniGene:Dm.19161 GeneID:32696 KEGG:dme:Dmel_CG8936 CTD:32696
FlyBase:FBgn0065032 GenomeRNAi:32696 NextBio:779895 EMBL:AY119268
RefSeq:NP_573193.1 SMR:Q9VX82 IntAct:Q9VX82 MINT:MINT-810294
STRING:Q9VX82 EnsemblMetazoa:FBtr0074410 UCSC:CG8936-RA
InParanoid:Q9VX82 Uniprot:Q9VX82
Length = 174
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 49/83 (59%), Positives = 70/83 (84%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
+Y+LA+++FD+PG+AGFPLN +Y KP+ + +LM+ Y Q+RQETG R+ E+VF+TPDG
Sbjct: 94 LYTLAISRFDIPGDAGFPLNGIYTKPE---DPELMRQYFLQLRQETGNRLLEKVFDTPDG 150
Query: 61 KPSKWWLCFSKKRFMDKSLTALG 83
KPSKWW+CF+KK+FM+KSL+ G
Sbjct: 151 KPSKWWICFAKKKFMEKSLSGPG 173
>ZFIN|ZDB-GENE-040625-107 [details] [associations]
symbol:arpc3 "actin related protein 2/3 complex,
subunit 3" species:7955 "Danio rerio" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315
ZFIN:ZDB-GENE-040625-107 GO:GO:0005856 GO:GO:0030833 CTD:10094
eggNOG:NOG324671 GeneTree:ENSGT00390000018018 HOGENOM:HOG000161465
HOVERGEN:HBG050581 KO:K05756 OMA:FRTYEIK OrthoDB:EOG4K0QPG
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060 EMBL:AL844518
EMBL:BC071479 EMBL:BC153657 IPI:IPI00496249 RefSeq:NP_001002114.1
UniGene:Dr.76713 SMR:Q6ZM62 STRING:Q6ZM62
Ensembl:ENSDART00000080628 GeneID:415204 KEGG:dre:415204
InParanoid:Q6ZM62 NextBio:20818873 Uniprot:Q6ZM62
Length = 178
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE GFPLN++YAKP S+ E + M+ YL Q+RQETGLR+C+RVF+
Sbjct: 95 MYTLGITNFPIPGEPGFPLNAMYAKPSSKQEEENMRAYLQQIRQETGLRLCDRVFDPQTD 154
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW+CF KK+FM+KSL+A GQ
Sbjct: 155 KPSKWWVCFVKKQFMNKSLSAPGQ 178
>UNIPROTKB|E1C8Y3 [details] [associations]
symbol:ARPC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA]
InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315 GO:GO:0005856
GO:GO:0030027 GO:GO:0030833 CTD:10094 GeneTree:ENSGT00390000018018
KO:K05756 OMA:FRTYEIK Gene3D:1.10.1760.10 PANTHER:PTHR12391
SUPFAM:SSF69060 EMBL:AADN02034896 IPI:IPI00588119
RefSeq:XP_415128.1 UniGene:Gga.12641 PRIDE:E1C8Y3
Ensembl:ENSGALT00000006056 GeneID:416837 KEGG:gga:416837
NextBio:20820241 Uniprot:E1C8Y3
Length = 178
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 48/84 (57%), Positives = 67/84 (79%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE GFPLN++YAKP ++ E ++M+ YL Q+RQETGLR+CE+VF+
Sbjct: 95 MYTLGITNFPIPGEPGFPLNAIYAKPTNKQEEEVMRAYLQQLRQETGLRLCEKVFDPQSD 154
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW+CF K++FM+KSL+ GQ
Sbjct: 155 KPSKWWICFVKRQFMNKSLSGPGQ 178
>MGI|MGI:1928375 [details] [associations]
symbol:Arpc3 "actin related protein 2/3 complex, subunit 3"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=TAS] [GO:0030027 "lamellipodium" evidence=IDA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315 MGI:MGI:1928375
GO:GO:0005737 GO:GO:0030027 GO:GO:0030833 GO:GO:0005885 CTD:10094
eggNOG:NOG324671 GeneTree:ENSGT00390000018018 HOGENOM:HOG000161465
HOVERGEN:HBG050581 KO:K05756 OMA:FRTYEIK OrthoDB:EOG4K0QPG
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060 EMBL:AB038243
EMBL:AK003485 EMBL:AK005437 EMBL:AK171651 EMBL:BC013618
EMBL:BC054440 IPI:IPI00124829 RefSeq:NP_062798.1 UniGene:Mm.275942
ProteinModelPortal:Q9JM76 SMR:Q9JM76 IntAct:Q9JM76 STRING:Q9JM76
PhosphoSite:Q9JM76 PaxDb:Q9JM76 PRIDE:Q9JM76
Ensembl:ENSMUST00000102525 GeneID:56378 KEGG:mmu:56378
UCSC:uc008zlf.1 InParanoid:Q9JM76 NextBio:312452 Bgee:Q9JM76
CleanEx:MM_ARPC3 Genevestigator:Q9JM76
GermOnline:ENSMUSG00000029465 Uniprot:Q9JM76
Length = 178
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 49/84 (58%), Positives = 66/84 (78%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE GFPLN++YAKP S+ E ++M+ YL Q+RQETGLR+CE+VF+
Sbjct: 95 MYTLGITNFPIPGEPGFPLNAIYAKPASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSD 154
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW CF K++FM+KSL+ GQ
Sbjct: 155 KPSKWWTCFVKRQFMNKSLSGPGQ 178
>UNIPROTKB|Q3T035 [details] [associations]
symbol:ARPC3 "Actin-related protein 2/3 complex subunit 3"
species:9913 "Bos taurus" [GO:0042995 "cell projection"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=IEA] [GO:0005885 "Arp2/3 protein
complex" evidence=IEA] InterPro:IPR007204 Pfam:PF04062
PIRSF:PIRSF016315 GO:GO:0005737 GO:GO:0005856 GO:GO:0042995
GO:GO:0030833 PDB:1K8K PDB:1TYQ PDB:1U2V PDB:2P9I PDB:2P9K PDB:2P9L
PDB:2P9N PDB:2P9P PDB:2P9S PDB:2P9U PDB:3DXK PDB:3DXM PDB:3RSE
PDBsum:1K8K PDBsum:1TYQ PDBsum:1U2V PDBsum:2P9I PDBsum:2P9K
PDBsum:2P9L PDBsum:2P9N PDBsum:2P9P PDBsum:2P9S PDBsum:2P9U
PDBsum:3DXK PDBsum:3DXM PDBsum:3RSE EMBL:BC102590 IPI:IPI00711750
RefSeq:NP_001029443.1 UniGene:Bt.59092 ProteinModelPortal:Q3T035
SMR:Q3T035 DIP:DIP-29793N STRING:Q3T035 PRIDE:Q3T035
Ensembl:ENSBTAT00000007028 GeneID:506596 KEGG:bta:506596 CTD:10094
eggNOG:NOG324671 GeneTree:ENSGT00390000018018 HOGENOM:HOG000161465
HOVERGEN:HBG050581 InParanoid:Q3T035 KO:K05756 OMA:FRTYEIK
OrthoDB:EOG4K0QPG EvolutionaryTrace:Q3T035 NextBio:20867671
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060
Uniprot:Q3T035
Length = 178
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 48/84 (57%), Positives = 67/84 (79%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE GFPLN++YAKP ++ E ++M+ YL Q+RQETGLR+CE+VF+ +
Sbjct: 95 MYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQND 154
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW CF K++FM+KSL+ GQ
Sbjct: 155 KPSKWWTCFVKRQFMNKSLSGPGQ 178
>UNIPROTKB|E2R985 [details] [associations]
symbol:E2R985 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315
GO:GO:0005856 GO:GO:0030833 GeneTree:ENSGT00390000018018
OMA:FRTYEIK Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060
EMBL:AAEX03014666 ProteinModelPortal:E2R985 PRIDE:E2R985
Ensembl:ENSCAFT00000013423 NextBio:20852945 Uniprot:E2R985
Length = 203
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 48/84 (57%), Positives = 67/84 (79%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE GFPLN++YAKP ++ E ++M+ YL Q+RQETGLR+CE+VF+ +
Sbjct: 120 MYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQND 179
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW CF K++FM+KSL+ GQ
Sbjct: 180 KPSKWWTCFVKRQFMNKSLSGPGQ 203
>UNIPROTKB|O15145 [details] [associations]
symbol:ARPC3 "Actin-related protein 2/3 complex subunit 3"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0015629 "actin cytoskeleton" evidence=TAS] [GO:0005200
"structural constituent of cytoskeleton" evidence=TAS] [GO:0006928
"cellular component movement" evidence=TAS] InterPro:IPR007204
Pfam:PF04062 PIRSF:PIRSF016315 GO:GO:0005737 GO:GO:0005200
GO:GO:0006928 GO:GO:0030027 GO:GO:0030833 GO:GO:0005885 CTD:10094
eggNOG:NOG324671 HOGENOM:HOG000161465 HOVERGEN:HBG050581 KO:K05756
OMA:FRTYEIK OrthoDB:EOG4K0QPG Gene3D:1.10.1760.10 PANTHER:PTHR12391
SUPFAM:SSF69060 EMBL:AF004561 EMBL:AF006086 EMBL:CR407667
EMBL:BC067747 EMBL:BC078162 IPI:IPI00005162 RefSeq:NP_005710.1
UniGene:Hs.524741 ProteinModelPortal:O15145 SMR:O15145
DIP:DIP-33187N IntAct:O15145 MINT:MINT-156243 STRING:O15145
PhosphoSite:O15145 OGP:O15145 PaxDb:O15145 PRIDE:O15145 DNASU:10094
Ensembl:ENST00000228825 GeneID:10094 KEGG:hsa:10094 UCSC:uc001tqq.3
GeneCards:GC12M110872 HGNC:HGNC:706 HPA:HPA006550 MIM:604225
neXtProt:NX_O15145 PharmGKB:PA25000 PhylomeDB:O15145 ChiTaRS:ARPC3
GenomeRNAi:10094 NextBio:38177 ArrayExpress:O15145 Bgee:O15145
Genevestigator:O15145 GermOnline:ENSG00000111229 Uniprot:O15145
Length = 178
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 48/84 (57%), Positives = 67/84 (79%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE GFPLN++YAKP ++ E ++M+ YL Q+RQETGLR+CE+VF+ +
Sbjct: 95 MYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQND 154
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW CF K++FM+KSL+ GQ
Sbjct: 155 KPSKWWTCFVKRQFMNKSLSGPGQ 178
>UNIPROTKB|B5APU8 [details] [associations]
symbol:ARPC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030027 "lamellipodium" evidence=IEA] [GO:0034314
"Arp2/3 complex-mediated actin nucleation" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=IEA]
InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315 GO:GO:0005856
GO:GO:0030027 GO:GO:0030833 CTD:10094 eggNOG:NOG324671
GeneTree:ENSGT00390000018018 HOGENOM:HOG000161465
HOVERGEN:HBG050581 KO:K05756 OMA:FRTYEIK OrthoDB:EOG4K0QPG
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060 EMBL:CU467926
EMBL:EU868836 RefSeq:NP_001172064.1 UniGene:Ssc.5181 SMR:B5APU8
STRING:B5APU8 Ensembl:ENSSSCT00000010764 GeneID:100154518
KEGG:ssc:100154518 Uniprot:B5APU8
Length = 178
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 48/84 (57%), Positives = 67/84 (79%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE GFPLN++YAKP ++ E ++M+ YL Q+RQETGLR+CE+VF+ +
Sbjct: 95 MYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQND 154
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW CF K++FM+KSL+ GQ
Sbjct: 155 KPSKWWTCFVKRQFMNKSLSGPGQ 178
>RGD|1311985 [details] [associations]
symbol:Arpc3 "actin related protein 2/3 complex, subunit 3"
species:10116 "Rattus norvegicus" [GO:0005885 "Arp2/3 protein
complex" evidence=IEA] [GO:0030027 "lamellipodium" evidence=ISO]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315
RGD:1311985 GO:GO:0005856 GO:GO:0030027 GO:GO:0030833
GeneTree:ENSGT00390000018018 OMA:FRTYEIK Gene3D:1.10.1760.10
PANTHER:PTHR12391 SUPFAM:SSF69060 IPI:IPI00768299 PRIDE:F1LRL8
Ensembl:ENSRNOT00000011499 UCSC:RGD:1311985 Uniprot:F1LRL8
Length = 177
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 48/84 (57%), Positives = 66/84 (78%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE GFPLN++YAKP S+ E + M+ YL Q+RQETGLR+C++VF+ +
Sbjct: 94 MYTLGITNFPIPGEPGFPLNAIYAKPASKQEDETMRAYLQQLRQETGLRLCDKVFDPQND 153
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW CF K++FM+KSL+ GQ
Sbjct: 154 KPSKWWTCFVKRQFMNKSLSGPGQ 177
>UNIPROTKB|J9P309 [details] [associations]
symbol:LOC100856747 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315
GO:GO:0005856 GO:GO:0030833 GeneTree:ENSGT00390000018018
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060 OMA:KWWICFA
EMBL:AAEX03006927 Ensembl:ENSCAFT00000000216 Uniprot:J9P309
Length = 178
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 47/84 (55%), Positives = 66/84 (78%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+ + F +PGE GFPLN++YAKP ++ E ++M+ YL Q+RQETGLR+CE+VF+ +
Sbjct: 95 MYTPGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQND 154
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW CF K++FM+KSL+ GQ
Sbjct: 155 KPSKWWTCFVKRQFMNKSLSGPGQ 178
>UNIPROTKB|G3N230 [details] [associations]
symbol:G3N230 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315 GO:GO:0005856
GO:GO:0030833 GeneTree:ENSGT00390000018018 Gene3D:1.10.1760.10
PANTHER:PTHR12391 SUPFAM:SSF69060 EMBL:DAAA02047392
Ensembl:ENSBTAT00000063292 Uniprot:G3N230
Length = 206
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 43/84 (51%), Positives = 63/84 (75%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
MY+L + F +PGE G PLN+VY KP ++ + +M+ Y+ ++RQETGL++CE+VF++
Sbjct: 123 MYTLGITNFPIPGEPGIPLNAVYTKPANKQDDKVMRAYVQRLRQETGLKLCEKVFDSQSD 182
Query: 61 KPSKWWLCFSKKRFMDKSLTALGQ 84
KPSKWW CF K +FM+KSL+ GQ
Sbjct: 183 KPSKWWTCFVKGQFMNKSLSGPGQ 206
>WB|WBGene00000203 [details] [associations]
symbol:arx-5 species:6239 "Caenorhabditis elegans"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] [GO:0018991
"oviposition" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0043652 "engulfment of apoptotic cell" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0010631 "epithelial cell migration" evidence=IMP] [GO:0055120
"striated muscle dense body" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0005856 GO:GO:0045132
GO:GO:0016331 GO:GO:0043652 GO:GO:0040027 GO:GO:0030833
GO:GO:0010631 eggNOG:NOG324671 GeneTree:ENSGT00390000018018
HOGENOM:HOG000161465 KO:K05756 OMA:FRTYEIK Gene3D:1.10.1760.10
PANTHER:PTHR12391 SUPFAM:SSF69060 EMBL:AL032626 PIR:T26637
RefSeq:NP_499667.1 ProteinModelPortal:Q9XWV3 SMR:Q9XWV3
IntAct:Q9XWV3 STRING:Q9XWV3 PaxDb:Q9XWV3 EnsemblMetazoa:Y37D8A.1
GeneID:176697 KEGG:cel:CELE_Y37D8A.1 UCSC:Y37D8A.1 CTD:176697
WormBase:Y37D8A.1 InParanoid:Q9XWV3 NextBio:893636 Uniprot:Q9XWV3
Length = 183
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 1 MYSLALAKF-DLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPD 59
+++LAL+ +PGE GFPLNS+Y PQS+ + D M+ YL Q+RQE G R+C+ F P
Sbjct: 97 LHALALSHLLPIPGENGFPLNSMYKAPQSKPDEDEMRAYLQQIRQEIGARLCDLAFPDPQ 156
Query: 60 GKPSKWWLCFSKKRFMDKSLTALG 83
+PSKWWLCF+++RFMDK L G
Sbjct: 157 DRPSKWWLCFARRRFMDKGLVGQG 180
>POMBASE|SPBC1778.08c [details] [associations]
symbol:arc3 "ARP2/3 actin-organizing complex subunit
Arc21" species:4896 "Schizosaccharomyces pombe" [GO:0000147 "actin
cortical patch assembly" evidence=IC] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005885 "Arp2/3 protein complex"
evidence=IDA] [GO:0006897 "endocytosis" evidence=IMP] [GO:0030479
"actin cortical patch" evidence=IDA] [GO:0032153 "cell division
site" evidence=IDA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IDA] [GO:0051286 "cell tip" evidence=IDA]
[GO:0051666 "actin cortical patch localization" evidence=IMP]
[GO:0071963 "establishment or maintenance of cell polarity
regulating cell shape" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0032432 "actin filament bundle"
evidence=IDA] InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315
PomBase:SPBC1778.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0032153
GO:GO:0051286 EMBL:CU329671 GO:GO:0006897 GenomeReviews:CU329671_GR
GO:GO:0030479 GO:GO:0000147 GO:GO:0071963 GO:GO:0051666
GO:GO:0005885 GO:GO:0034314 PDB:3DWL PDBsum:3DWL eggNOG:NOG324671
HOGENOM:HOG000161465 KO:K05756 OMA:FRTYEIK Gene3D:1.10.1760.10
PANTHER:PTHR12391 SUPFAM:SSF69060 PIR:T39690 RefSeq:NP_596291.1
ProteinModelPortal:Q9Y7J4 SMR:Q9Y7J4 IntAct:Q9Y7J4 STRING:Q9Y7J4
EnsemblFungi:SPBC1778.08c.1 GeneID:2540144 KEGG:spo:SPBC1778.08c
OrthoDB:EOG4KSSV1 EvolutionaryTrace:Q9Y7J4 NextBio:20801280
Uniprot:Q9Y7J4
Length = 174
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 3 SLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDGKP 62
SLAL F +PG AGFPLN++YA P S +A++M+ YLTQ RQE R+ V+ T P
Sbjct: 98 SLALENFSIPGSAGFPLNALYAPPLSPQDAEIMRTYLTQFRQELAYRLLSHVYATEKDHP 157
Query: 63 SKWWLCFSKKRFMDKSL 79
SKWW CFSK+RFM+K+L
Sbjct: 158 SKWWTCFSKRRFMNKAL 174
>SGD|S000004362 [details] [associations]
symbol:ARC18 "Subunit of the ARP2/3 complex" species:4932
"Saccharomyces cerevisiae" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA;IDA] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0051654 "establishment of mitochondrion localization"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0000001 "mitochondrion inheritance" evidence=TAS]
InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315 SGD:S000004362
GO:GO:0005739 GO:GO:0007015 EMBL:BK006945 GO:GO:0000001
GO:GO:0030833 GO:GO:0005885 GO:GO:0051654 eggNOG:NOG324671
GeneTree:ENSGT00390000018018 HOGENOM:HOG000161465 KO:K05756
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060
OrthoDB:EOG4KSSV1 EMBL:U19103 EMBL:AY558319 PIR:S51388
RefSeq:NP_013474.3 RefSeq:NP_013476.3 ProteinModelPortal:Q05933
SMR:Q05933 DIP:DIP-2218N IntAct:Q05933 MINT:MINT-570288
STRING:Q05933 PaxDb:Q05933 PeptideAtlas:Q05933 EnsemblFungi:YLR370C
GeneID:851085 GeneID:851087 KEGG:sce:YLR370C KEGG:sce:YLR372W
CYGD:YLR370c KO:K10246 OMA:KWWICFA NextBio:967750
Genevestigator:Q05933 GermOnline:YLR370C Uniprot:Q05933
Length = 178
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 42/80 (52%), Positives = 57/80 (71%)
Query: 3 SLALAKFDLPGEAGFPLNSVYAKP-QSQNEADLMKNYLTQVRQETGLRVCERVFNTPDGK 61
++AL F LPG GFPLN+VY P Q N DL+K Y+ Q RQE +R+ ERV+++ D K
Sbjct: 99 NVALDNFTLPGTPGFPLNNVYQVPVQDHNSMDLLKTYIQQFRQELAMRLLERVYSSTDSK 158
Query: 62 --PSKWWLCFSKKRFMDKSL 79
PSK+WL F+++RFM+KSL
Sbjct: 159 EYPSKFWLAFTRRRFMNKSL 178
>CGD|CAL0003027 [details] [associations]
symbol:ARC18 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0030479 "actin cortical patch"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0051286 "cell
tip" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] [GO:0051654 "establishment of
mitochondrion localization" evidence=IEA] InterPro:IPR007204
Pfam:PF04062 PIRSF:PIRSF016315 CGD:CAL0003027 GO:GO:0005856
GO:GO:0035690 GO:GO:0030833 eggNOG:NOG324671 KO:K05756
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060
EMBL:AACQ01000106 EMBL:AACQ01000112 RefSeq:XP_714052.1
RefSeq:XP_714327.1 ProteinModelPortal:Q59WT0 STRING:Q59WT0
GeneID:3644056 GeneID:3644314 KEGG:cal:CaO19.121
KEGG:cal:CaO19.7768 Uniprot:Q59WT0
Length = 182
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
+ +L++ F LPG+ GFPLNS+Y P +++E +L+KNYLTQ RQE R+ +R+++
Sbjct: 104 LINLSVDNFHLPGDIGFPLNSLYVSPANKSEYELLKNYLTQFRQELSDRLIKRIYHDDPN 163
Query: 61 KPSKWWLCFSKKRFMDKSL 79
PSK WL F+K++FM+KSL
Sbjct: 164 IPSKHWLAFTKRKFMNKSL 182
>UNIPROTKB|Q59WT0 [details] [associations]
symbol:ARC18 "Potential Arp2/3 complex subunit Arc18"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR007204 Pfam:PF04062
PIRSF:PIRSF016315 CGD:CAL0003027 GO:GO:0005856 GO:GO:0035690
GO:GO:0030833 eggNOG:NOG324671 KO:K05756 Gene3D:1.10.1760.10
PANTHER:PTHR12391 SUPFAM:SSF69060 EMBL:AACQ01000106
EMBL:AACQ01000112 RefSeq:XP_714052.1 RefSeq:XP_714327.1
ProteinModelPortal:Q59WT0 STRING:Q59WT0 GeneID:3644056
GeneID:3644314 KEGG:cal:CaO19.121 KEGG:cal:CaO19.7768
Uniprot:Q59WT0
Length = 182
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
+ +L++ F LPG+ GFPLNS+Y P +++E +L+KNYLTQ RQE R+ +R+++
Sbjct: 104 LINLSVDNFHLPGDIGFPLNSLYVSPANKSEYELLKNYLTQFRQELSDRLIKRIYHDDPN 163
Query: 61 KPSKWWLCFSKKRFMDKSL 79
PSK WL F+K++FM+KSL
Sbjct: 164 IPSKHWLAFTKRKFMNKSL 182
>UNIPROTKB|G4ND09 [details] [associations]
symbol:MGG_00307 "ARP2/3 complex 21 kDa subunit"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007204 Pfam:PF04062
PIRSF:PIRSF016315 GO:GO:0005739 GO:GO:0007015 EMBL:CM001235
GO:GO:0030833 GO:GO:0005885 GO:GO:0051654 KO:K05756
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060
RefSeq:XP_003718783.1 ProteinModelPortal:G4ND09
EnsemblFungi:MGG_00307T0 GeneID:5050763 KEGG:mgr:MGG_00307
Uniprot:G4ND09
Length = 192
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 39/79 (49%), Positives = 56/79 (70%)
Query: 3 SLALAK-FDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTP-DG 60
+LAL F +PG+ GFPLN +Y P+ + +A+L++ Y+ Q RQE +R+ RV+ DG
Sbjct: 114 NLALDNNFAIPGDPGFPLNQMYEAPRDRQDAELLRQYMAQCRQELAIRLLARVYEEGGDG 173
Query: 61 KPSKWWLCFSKKRFMDKSL 79
KPSKWWL F+K++FM KSL
Sbjct: 174 KPSKWWLSFTKRKFMGKSL 192
>DICTYBASE|DDB_G0292804 [details] [associations]
symbol:arcC "actin related protein 2/3 complex,
subunit 3" species:44689 "Dictyostelium discoideum" [GO:0030670
"phagocytic vesicle membrane" evidence=IDA] [GO:0006909
"phagocytosis" evidence=IEP] [GO:0006887 "exocytosis" evidence=IEP]
[GO:0005885 "Arp2/3 protein complex" evidence=IEA;IDA] [GO:0030864
"cortical actin cytoskeleton" evidence=IC] [GO:0030175 "filopodium"
evidence=IC] [GO:0051015 "actin filament binding" evidence=TAS]
[GO:0045335 "phagocytic vesicle" evidence=TAS] [GO:0045010 "actin
nucleation" evidence=TAS] [GO:0030041 "actin filament
polymerization" evidence=TAS] [GO:0006928 "cellular component
movement" evidence=TAS] [GO:0031252 "cell leading edge"
evidence=IC] [GO:0031143 "pseudopodium" evidence=IEA;IC]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005905 "coated pit" evidence=IDA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR007204
Pfam:PF04062 PIRSF:PIRSF016315 dictyBase:DDB_G0292804 GO:GO:0005829
GO:GO:0031252 GO:GO:0030670 GenomeReviews:CM000155_GR
EMBL:AAFI02000197 GO:GO:0006909 GO:GO:0006928 GO:GO:0030175
GO:GO:0031143 GO:GO:0030041 GO:GO:0030864 GO:GO:0006887
GO:GO:0045010 GO:GO:0005885 eggNOG:NOG324671 KO:K05756 OMA:FRTYEIK
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060 EMBL:AF095932
RefSeq:XP_629371.1 ProteinModelPortal:O96624 STRING:O96624
EnsemblProtists:DDB0201632 GeneID:8628888 KEGG:ddi:DDB_G0292804
ProtClustDB:CLSZ2429337 Uniprot:O96624
Length = 174
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 32/79 (40%), Positives = 56/79 (70%)
Query: 1 MYSLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDG 60
++ +A +F +PGE+ FPL + P +++ AD ++ Y TQ+R E G+R+C+RV+
Sbjct: 96 LFLIAQEQFSIPGESAFPLGGLVTVPNTRDAADTLRQYFTQLRLELGVRLCQRVYAVDPS 155
Query: 61 KPSKWWLCFSKKRFMDKSL 79
K +KWW+CFSK++F++K+L
Sbjct: 156 KANKWWICFSKRKFLNKAL 174
>TAIR|locus:2195633 [details] [associations]
symbol:ARPC3 "AT1G60430" species:3702 "Arabidopsis
thaliana" [GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0007015 "actin filament
organization" evidence=TAS] [GO:0005885 "Arp2/3 protein complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009407 "toxin catabolic process" evidence=RCA]
InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315 EMBL:CP002684
GO:GO:0007015 GO:GO:0030833 GO:GO:0005885 eggNOG:NOG324671
HOGENOM:HOG000161465 KO:K05756 OMA:FRTYEIK Gene3D:1.10.1760.10
PANTHER:PTHR12391 SUPFAM:SSF69060 UniGene:At.10685 UniGene:At.64112
EMBL:BT025737 IPI:IPI00540902 RefSeq:NP_001077743.1
RefSeq:NP_564757.1 SMR:Q1ECJ7 IntAct:Q1ECJ7 STRING:Q1ECJ7
EnsemblPlants:AT1G60430.1 EnsemblPlants:AT1G60430.2 GeneID:842338
KEGG:ath:AT1G60430 TAIR:At1g60430 InParanoid:Q1ECJ7
ProtClustDB:CLSN2688939 Genevestigator:Q1ECJ7 Uniprot:Q1ECJ7
Length = 174
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 34/74 (45%), Positives = 51/74 (68%)
Query: 3 SLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDGKP 62
+L L +PGE GFP +++ PQSQ+EA+L +NYL QVR+ET R+ + +G P
Sbjct: 98 NLGLEDIPVPGETGFPFPGLFSLPQSQDEAELFRNYLKQVREETSGRLLSVAYRA-NGTP 156
Query: 63 SKWWLCFSKKRFMD 76
+KWWL F+K++FM+
Sbjct: 157 NKWWLAFAKRKFMN 170
>ASPGD|ASPL0000013407 [details] [associations]
symbol:AN8065 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030479 "actin cortical patch" evidence=IEA]
[GO:0051286 "cell tip" evidence=IEA] [GO:0005885 "Arp2/3 protein
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0032153 "cell
division site" evidence=IEA] [GO:0071963 "establishment or
maintenance of cell polarity regulating cell shape" evidence=IEA]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0051666
"actin cortical patch localization" evidence=IEA] [GO:0051654
"establishment of mitochondrion localization" evidence=IEA]
InterPro:IPR007204 Pfam:PF04062 PIRSF:PIRSF016315 GO:GO:0005739
GO:GO:0005856 EMBL:BN001302 GO:GO:0030833 GO:GO:0051654
Gene3D:1.10.1760.10 PANTHER:PTHR12391 SUPFAM:SSF69060
EnsemblFungi:CADANIAT00004091 OMA:NAICAKP Uniprot:C8V680
Length = 188
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 3 SLALAKFDLPGEAGFPLNSVYAKPQSQNEADLMKNYLTQVRQETGLRVCERVFNTPDGK- 61
++AL F +PG+A FPLN + P+ + +A+ +++YLTQVRQE R+ R++ P G
Sbjct: 113 NVALDNFAIPGDASFPLNQAFEPPRDRQDAETLRSYLTQVRQEIASRLLARLY--PGGVG 170
Query: 62 PSKWWLCFSKKRFMDKS 78
PSK+WL F+K++FM KS
Sbjct: 171 PSKFWLSFTKRKFMGKS 187
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 85 85 0.00091 102 3 11 22 0.45 29
29 0.46 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 543 (58 KB)
Total size of DFA: 109 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.94u 0.09s 10.03t Elapsed: 00:00:10
Total cpu time: 9.94u 0.09s 10.03t Elapsed: 00:00:10
Start: Thu Aug 15 13:51:56 2013 End: Thu Aug 15 13:52:06 2013