RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16828
(372 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 41.5 bits (98), Expect = 3e-06
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 207 PYHCKYCDKTFTKRMNVKTHERMKHENHKPYEC 239
PY C+ C K F++ ++ H + H + +P++C
Sbjct: 5 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 40.0 bits (94), Expect = 9e-06
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 288 SDAKPFVCNICGKDFKLKYYVNLHMR-THTRIRPTFECDV 326
S KP++C CGK F ++N H++ HT RP +C V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQV 39
Score = 33.8 bits (78), Expect = 0.002
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 82 PVECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCE 114
P C CGK SR D L HI VH+ + + C+
Sbjct: 5 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 33.4 bits (77), Expect = 0.002
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
K + C C +L HIK+ HT E
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSE 32
Score = 32.3 bits (74), Expect = 0.004
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHTSVTP 50
C CGK SR L H++ HTS P
Sbjct: 7 ICQSCGKGFSRPDHLNGHIKQVHTSERP 34
Score = 27.7 bits (62), Expect = 0.20
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 107 SGKEYPCEQCDRKFTNGYKLKQHM 130
GK Y C+ C + F+ L H+
Sbjct: 2 VGKPYICQSCGKGFSRPDHLNGHI 25
Score = 27.7 bits (62), Expect = 0.20
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 235 KPYECYICNKILVSRGRLNEHLNQVHLAQR-FECKL 269
KPY C C K LN H+ QVH ++R +C++
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 26.5 bits (59), Expect = 0.61
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 265 FECKLCHKTIVSEKTFKKHM-ALHSDAKPFVCNI 297
+ C+ C K H+ +H+ +P C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 25.7 bits (57), Expect = 1.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 345 VEKSHLCFVCGAGFVNDAGLKVHMRKH 371
V K ++C CG GF L H+++
Sbjct: 2 VGKPYICQSCGKGFSRPDHLNGHIKQV 28
Score = 24.2 bits (53), Expect = 4.2
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 182 CTQCGFGCYTNRELEEHQILTH-GAEPYHCK 211
C CG G L H H P+ C+
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 39.1 bits (92), Expect = 2e-05
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
HS KP+ C CGK F + H R HT
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31
Score = 32.2 bits (74), Expect = 0.004
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 105 VHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
+HSG K Y C +C + F+ L QH H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 29.1 bits (66), Expect = 0.051
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 204 GAEPYHCKYCDKTFTKRMNVKTHER 228
G +PY C C K F++ + H+R
Sbjct: 4 GEKPYGCVECGKAFSRSSILVQHQR 28
Score = 29.1 bits (66), Expect = 0.061
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
+H EK + C CG F + L H R H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 28.4 bits (64), Expect = 0.11
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
K + C +C A L H +R HT E
Sbjct: 6 KPYGCVECGKAFSRSSILVQH-QRVHTGE 33
Score = 28.4 bits (64), Expect = 0.12
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHT 46
C CGK SR S LV H R HT
Sbjct: 9 GCVECGKAFSRSSILVQHQRV-HT 31
Score = 26.0 bits (58), Expect = 0.74
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 82 PVECSYCGKVLSRKDKLTRHIAAVHSG 108
P C CGK SR L +H VH+G
Sbjct: 7 PYGCVECGKAFSRSSILVQHQ-RVHTG 32
Score = 23.7 bits (52), Expect = 5.8
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 231 HENHKPYECYICNKILVSRGRLNEH 255
H KPY C C K L +H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQH 26
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 37.4 bits (87), Expect = 8e-05
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 282 KHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
+ + + + C+ CGK F ++ H RTHT
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36
Score = 30.5 bits (69), Expect = 0.019
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 338 KHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
+ + + C CG F + + L H R H
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 26.7 bits (59), Expect = 0.51
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 105 VHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
+ Y C++C + F++ L +H TH
Sbjct: 6 QQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 25.5 bits (56), Expect = 1.2
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 198 HQILTHGAEPYHCKYCDKTFTKRMNVKTHER 228
+ Y C C K+F+ ++ H R
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33
Score = 24.7 bits (54), Expect = 2.8
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 2/34 (5%)
Query: 311 HMRTHTRIRPTFECDVCHQIFPTDFR-TKHMLVH 343
R ++CD C + F +KH H
Sbjct: 3 SEWQQRERRR-YKCDECGKSFSHSSDLSKHRRTH 35
Score = 23.6 bits (51), Expect = 6.2
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
+++KCD+C + +L H +R HT E
Sbjct: 11 RRYKCDECGKSFSHSSDLSKH-RRTHTGE 38
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 37.7 bits (87), Expect = 8e-05
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 88 CGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTH 133
CGK + K + RH++ + Y C C +KF + L HM H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 35.4 bits (81), Expect = 6e-04
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 265 FECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTH 315
+ C+ C K+ + +HM++H +P+ C +CGK FK+K+++ HM+ H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 31.2 bits (70), Expect = 0.018
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 235 KPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHMALH 287
K Y C C K + + + H++ + + C +C K + HM +H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 31.2 bits (70), Expect = 0.021
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 184 QCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHERM 229
QCG + + H + G PY C C K F + ++ H ++
Sbjct: 7 QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52
Score = 28.9 bits (64), Expect = 0.13
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 207 PYHCKYCDKTFTKRMNVKTHERMKHENHKPYECYICNKILVSRGRLNEHL 256
Y C+ C K+FT + H M +PY C +C K + L H+
Sbjct: 3 LYPCQ-CGKSFTHKSQRDRHMSMHL-GLRPYGCGVCGKKFKMKHHLVGHM 50
Score = 27.7 bits (61), Expect = 0.31
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 13/63 (20%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYATKDKYNLGT 168
K YPC+ C + FT+ + +HM H+ + C C K K++L
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLR------------PYGCGVCGKKFKMKHHLVG 48
Query: 169 HIK 171
H+K
Sbjct: 49 HMK 51
Score = 27.0 bits (59), Expect = 0.52
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 337 TKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
+HM +H + + C VCG F L HM+ H
Sbjct: 19 DRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 27.0 bits (59), Expect = 0.61
Identities = 12/51 (23%), Positives = 14/51 (27%), Gaps = 2/51 (3%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQ 199
K + C QC + K H H C CG L H
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50
Score = 23.9 bits (51), Expect = 6.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 23 ECPVCGKVLSRKSKLVSHMR 42
C VCGK K LV HM+
Sbjct: 32 GCGVCGKKFKMKHHLVGHMK 51
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 36.8 bits (86), Expect = 1e-04
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHT 316
+ FVC +C + F + ++ H R+HT
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHT 26
Score = 29.5 bits (67), Expect = 0.035
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTH 133
+ + CE C R F LK+H +H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 29.1 bits (66), Expect = 0.054
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 207 PYHCKYCDKTFTKRMNVKTHER 228
+ C+ C + F ++ ++K H R
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYR 23
Score = 28.7 bits (65), Expect = 0.065
Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHT 46
C VC + +R+ L H RS HT
Sbjct: 4 VCEVCTRAFARQEHLKRHYRS-HT 26
Score = 27.2 bits (61), Expect = 0.30
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
+ F C+ C A + +L H R HT E
Sbjct: 1 RSFVCEVCTRAFARQEHLKRH-YRSHTNE 28
Score = 26.4 bits (59), Expect = 0.49
Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 82 PVECSYCGKVLSRKDKLTRHIAAVHSG 108
C C + +R++ L RH H+
Sbjct: 2 SFVCEVCTRAFARQEHLKRHY-RSHTN 27
Score = 24.5 bits (54), Expect = 2.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 347 KSHLCFVCGAGFVNDAGLKVHMRKH 371
+S +C VC F LK H R H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 36.0 bits (84), Expect = 2e-04
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHT 316
KPF C IC ++F ++ H+RTHT
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHT 27
Score = 29.1 bits (66), Expect = 0.055
Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHT 46
+C +C + SR L +H+R+ HT
Sbjct: 5 QCRICMRNFSRSDHLTTHIRT-HT 27
Score = 29.1 bits (66), Expect = 0.061
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 207 PYHCKYCDKTFTKRMNVKTHER 228
P+ C+ C + F++ ++ TH R
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIR 24
Score = 28.7 bits (65), Expect = 0.067
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTH 133
K + C C R F+ L H+ TH
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 26.8 bits (60), Expect = 0.31
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 82 PVECSYCGKVLSRKDKLTRHIAAVHSG 108
P +C C + SR D LT HI H+G
Sbjct: 3 PFQCRICMRNFSRSDHLTTHI-RTHTG 28
Score = 26.0 bits (58), Expect = 0.59
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 346 EKSHLCFVCGAGFVNDAGLKVHMRKH 371
+K C +C F L H+R H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 25.3 bits (56), Expect = 1.2
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHT 175
K F+C C +L TH R HT
Sbjct: 2 KPFQCRICMRNFSRSDHLTTH-IRTHT 27
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 35.8 bits (83), Expect = 3e-04
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
H+ KP+ C+ C K F+ K +++H + +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 30.0 bits (68), Expect = 0.027
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 105 VHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
H+G K Y C CD+ F L H +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 29.6 bits (67), Expect = 0.037
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERMKHE 232
G +PY C +CDKTF ++ + H + H+
Sbjct: 5 GEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 28.1 bits (63), Expect = 0.15
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
H EK + C C F L +H +++
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 26.9 bits (60), Expect = 0.35
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFH 45
C C K +K L H + +H
Sbjct: 10 ACSHCDKTFRQKQLLDMHFKRYH 32
Score = 26.6 bits (59), Expect = 0.61
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEY 178
K + C CD + K L H KR H +
Sbjct: 7 KPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 26.2 bits (58), Expect = 0.68
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 82 PVECSYCGKVLSRKDKLTRHIAAVHSGKEY 111
P CS+C K +K L H + +
Sbjct: 8 PYACSHCDKTFRQKQLLDMHF-KRYHDPNF 36
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 35.9 bits (83), Expect = 3e-04
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 287 HSDAKPFVCNICGKDFKLKYYVNLHMRTHT 316
S +PFVC IC F K H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 29.3 bits (66), Expect = 0.046
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERMKHEN 233
G P+ C+ C FT + N H ++ +
Sbjct: 4 GKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 29.3 bits (66), Expect = 0.062
Identities = 8/29 (27%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 106 HSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
SG + + C C FT +H+ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 25.5 bits (56), Expect = 1.1
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKEYS 179
+ F C C A K N H + HT S
Sbjct: 6 RPFVCRICLSAFTTKANCARH-LKVHTDTLS 35
Score = 25.1 bits (55), Expect = 1.8
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 343 HDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
++ +C +C + F A H++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 23.2 bits (50), Expect = 8.0
Identities = 6/20 (30%), Positives = 7/20 (35%)
Query: 82 PVECSYCGKVLSRKDKLTRH 101
P C C + K RH
Sbjct: 7 PFVCRICLSAFTTKANCARH 26
Score = 23.2 bits (50), Expect = 8.3
Identities = 6/24 (25%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHT 46
C +C + K+ H++ HT
Sbjct: 9 VCRICLSAFTTKANCARHLKV-HT 31
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 35.4 bits (82), Expect = 4e-04
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHT 316
K F C C K F +++ H++TH
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQ 26
Score = 28.5 bits (64), Expect = 0.099
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTH 133
K++ C +C ++F L +H+ TH
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
Score = 27.3 bits (61), Expect = 0.23
Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHT 46
CP C K R L H+++ H
Sbjct: 4 ACPECPKRFMRSDHLSKHIKT-HQ 26
Score = 27.3 bits (61), Expect = 0.28
Identities = 8/29 (27%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
KKF C +C +L H + H +
Sbjct: 1 KKFACPECPKRFMRSDHLSKH-IKTHQNK 28
Score = 26.5 bits (59), Expect = 0.40
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 207 PYHCKYCDKTFTKRMNVKTHER 228
+ C C K F + ++ H +
Sbjct: 2 KFACPECPKRFMRSDHLSKHIK 23
Score = 25.0 bits (55), Expect = 1.8
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 82 PVECSYCGKVLSRKDKLTRH 101
C C K R D L++H
Sbjct: 2 KFACPECPKRFMRSDHLSKH 21
Score = 23.8 bits (52), Expect = 4.7
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 347 KSHLCFVCGAGFVNDAGLKVHMRKH 371
K C C F+ L H++ H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 35.5 bits (82), Expect = 4e-04
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 283 HMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRI 318
+ KPF C C + F ++ LH + H +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 28.9 bits (65), Expect = 0.070
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 105 VHSG-KEYPCEQCDRKFTNGYKLKQHMLTHM 134
+G K + C CDR F+ L H HM
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 27.0 bits (60), Expect = 0.34
Identities = 7/33 (21%), Positives = 10/33 (30%)
Query: 339 HMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
K C C F L +H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.8 bits (57), Expect = 1.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 204 GAEPYHCKYCDKTFTKRMNVKTHER 228
G +P+ C CD++F++ ++ H +
Sbjct: 8 GIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 25.1 bits (55), Expect = 2.0
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 311 HMRTHTRIRPTFECDVCHQIFPT-DFRTKHMLVH 343
R T I+P F+C C + F D H H
Sbjct: 2 STRGSTGIKP-FQCPDCDRSFSRSDHLALHRKRH 34
Score = 23.9 bits (52), Expect = 4.2
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHTSV 48
+CP C + SR L H + H V
Sbjct: 13 QCPDCDRSFSRSDHLALHRKR-HMLV 37
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 33.7 bits (78), Expect = 0.001
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHT 316
KP+ C CGK F + H R HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 27.6 bits (62), Expect = 0.21
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHT 46
+C CGK S+ S L++H R HT
Sbjct: 4 KCLECGKAFSQNSGLINHQRI-HT 26
Score = 27.2 bits (61), Expect = 0.24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 207 PYHCKYCDKTFTKRMNVKTHERM 229
PY C C K F++ + H+R+
Sbjct: 2 PYKCLECGKAFSQNSGLINHQRI 24
Score = 25.6 bits (57), Expect = 0.86
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 82 PVECSYCGKVLSRKDKLTRH 101
P +C CGK S+ L H
Sbjct: 2 PYKCLECGKAFSQNSGLINH 21
Score = 24.5 bits (54), Expect = 2.6
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTH 133
K Y C +C + F+ L H H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 33.4 bits (77), Expect = 0.002
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
K ++C C + HI ++HT+
Sbjct: 7 KPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 32.3 bits (74), Expect = 0.005
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 287 HSDAKPFVCNICGKDFKLKYYVNLH-MRTHTR 317
HS KP+ C IC F + +H ++ HT
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 31.1 bits (71), Expect = 0.011
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERMKH 231
G +PY C C FT+ +K H KH
Sbjct: 5 GEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 29.6 bits (67), Expect = 0.046
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 105 VHSG-KEYPCEQCDRKFTNGYKLKQHMLTH 133
HSG K Y C C +FT +K H+L
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 29.2 bits (66), Expect = 0.057
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 82 PVECSYCGKVLSRKDKLTRHIAAVHSGK 109
P EC C ++ + HI H+
Sbjct: 8 PYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 28.8 bits (65), Expect = 0.075
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHT 46
EC +C ++ + H+ HT
Sbjct: 10 ECYICHARFTQSGTMKMHILQKHT 33
Score = 26.5 bits (59), Expect = 0.57
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 231 HENHKPYECYICNKILVSRGRLNEHLNQVH 260
H KPYECYIC+ G + H+ Q H
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 24.9 bits (55), Expect = 2.0
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 342 VHDVEKSHLCFVCGAGFVNDAGLKVHMRKH 371
H EK + C++C A F +K+H+ +
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 24.2 bits (53), Expect = 3.4
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 172 RRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAE 206
R H+ E C C + ++ H + H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 31.9 bits (73), Expect = 0.006
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 291 KPFVCNI--CGKDFKLKYYVNLHMRTHT 316
+PF+C CGK F + H RTHT
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHT 28
Score = 24.6 bits (54), Expect = 2.6
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 109 KEYPC--EQCDRKFTNGYKLKQHMLTH 133
+ + C C ++FT +L++H TH
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 24.6 bits (54), Expect = 2.6
Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 24 CPVCGKVLSRKSKLVSHMRSFHT 46
CGK +R +L H R+ HT
Sbjct: 7 WSYCGKRFTRSDELQRHKRT-HT 28
Score = 24.2 bits (53), Expect = 3.1
Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 207 PYHCKY--CDKTFTKRMNVKTHER 228
P+ C + C K FT+ ++ H+R
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKR 25
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 32.0 bits (73), Expect = 0.007
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 293 FVCN--ICGKDFKLKYYVNLHMRTHTRIRPTFECD 325
F C CGK F K ++ HM+ H+ R + C+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICE 35
Score = 29.7 bits (67), Expect = 0.043
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 208 YHCKY--CDKTFTKRMNVKTHERMKHENHKPYEC 239
+ C C K+F + ++K H ++ H + + Y C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKL-HSDTRDYIC 34
Score = 25.8 bits (57), Expect = 0.86
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHTSVTP 50
P CGK + K L HM+ H+
Sbjct: 5 PEPACGKSFNFKKHLKEHMKL-HSDTRD 31
Score = 23.9 bits (52), Expect = 4.2
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 84 ECSYCGKVLSRKDKLTRHIAAVHSG-KEYPCE 114
CGK + K L H+ +HS ++Y CE
Sbjct: 5 PEPACGKSFNFKKHLKEHM-KLHSDTRDYICE 35
Score = 23.9 bits (52), Expect = 4.6
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 265 FECK--LCHKTIVSEKTFKKHMALHSDAKPFVC 295
F C C K+ +K K+HM LHSD + ++C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 31.5 bits (72), Expect = 0.007
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 291 KPFVCNI--CGKDFKLKYYVNLHMRTHT 316
KP C C K + + H+R+HT
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHT 28
Score = 25.8 bits (57), Expect = 0.84
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 207 PYHCKY--CDKTFTKRMNVKTHER 228
P+ C + C K++++ N+KTH R
Sbjct: 2 PHKCTFEGCRKSYSRLENLKTHLR 25
Score = 25.0 bits (55), Expect = 1.5
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Query: 25 PVCGKVLSRKSKLVSHMRSFHT 46
C K SR L +H+RS HT
Sbjct: 8 EGCRKSYSRLENLKTHLRS-HT 28
Score = 23.4 bits (51), Expect = 5.8
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 109 KEYPCEQ--CDRKFTNGYKLKQHMLTH 133
K + C C + ++ LK H+ +H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
Score = 23.1 bits (50), Expect = 8.0
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 82 PVECSY--CGKVLSRKDKLTRHIAAVHSG 108
P +C++ C K SR + L H+ H+G
Sbjct: 2 PHKCTFEGCRKSYSRLENLKTHL-RSHTG 29
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 30.4 bits (69), Expect = 0.019
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 291 KPFVCNI--CGKDFKLKYYVNLHMRTHT 316
+P+ C + C + F + H+R HT
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHT 28
Score = 25.4 bits (56), Expect = 1.1
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 207 PYHCKY--CDKTFTKRMNVKTHER 228
PY C CD+ F++ ++ H R
Sbjct: 2 PYACPVESCDRRFSRSADLTRHIR 25
Score = 24.6 bits (54), Expect = 2.6
Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Query: 25 PVCGKVLSRKSKLVSHMRSFHT 46
C + SR + L H+R HT
Sbjct: 8 ESCDRRFSRSADLTRHIRI-HT 28
Score = 23.8 bits (52), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 82 PVECSY--CGKVLSRKDKLTRHIAAVHSG 108
P C C + SR LTRHI +H+G
Sbjct: 2 PYACPVESCDRRFSRSADLTRHI-RIHTG 29
Score = 23.0 bits (50), Expect = 9.5
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 109 KEYPCEQ--CDRKFTNGYKLKQHMLTH 133
+ Y C CDR+F+ L +H+ H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 30.5 bits (68), Expect = 0.021
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHTKE 177
K ++C C++ + D NL THIK +H+KE
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE 29
Score = 26.7 bits (58), Expect = 0.40
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 206 EPYHCKYCDKTFTKRMNVKTHERMKHENHK 235
+ Y C+YC+ N+KTH + KH K
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 30.2 bits (68), Expect = 0.027
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 82 PVECSYCGKVLSRKDKLTRHIAAVHSG 108
P C C + +R+D L RH +HSG
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHSG 27
Score = 23.2 bits (50), Expect = 8.3
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFH 45
C +C + +R+ L+ H + H
Sbjct: 3 PCGLCNRAFTRRDLLIRHAQKIH 25
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 29.6 bits (67), Expect = 0.036
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 291 KPFVCNI--CGKDFKLKYYVNLHMRTHTR 317
+P+ C+ C K F + + H ++H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 25.0 bits (55), Expect = 1.6
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 109 KEYPCEQ--CDRKFTNGYKLKQHMLTHMQK 136
+ Y C+ CD+ F + L +H +H +K
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 25.0 bits (55), Expect = 1.8
Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 207 PYHCKY--CDKTFTKRMNVKTHER 228
PY C + CDK F + ++ H++
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHKK 26
Score = 24.2 bits (53), Expect = 3.3
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 3/30 (10%)
Query: 82 PVECSY--CGKVLSRKDKLTRHIAAVHSGK 109
P C + C K R L RH H K
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHK-KSHQEK 31
Score = 23.8 bits (52), Expect = 4.2
Identities = 8/22 (36%), Positives = 10/22 (45%), Gaps = 1/22 (4%)
Query: 25 PVCGKVLSRKSKLVSHMRSFHT 46
P C K R L+ H +S H
Sbjct: 9 PGCDKAFVRNHDLIRHKKS-HQ 29
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 28.5 bits (64), Expect = 0.083
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 291 KPFVCNI--CGKDFKLKYYVNLHMRTHT 316
KPF C CGK F L + + H+R HT
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28
Score = 24.3 bits (53), Expect = 3.2
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 207 PYHCKY--CDKTFTKRMNVKTHERM 229
P+ C + C K F+ N++TH R+
Sbjct: 2 PFQCTFEGCGKRFSLDFNLRTHVRI 26
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.1 bits (63), Expect = 0.12
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 291 KPFVCNI--CGKDFKLKYYVNLHMRTHT 316
+P+VC C K F + H+ TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 25.4 bits (56), Expect = 1.3
Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 207 PYHCKY--CDKTFTKRMNVKTHER 228
PY C + C+K F + N+K+H
Sbjct: 2 PYVCPFDGCNKKFAQSTNLKSHIL 25
Score = 24.6 bits (54), Expect = 2.5
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 109 KEYPC--EQCDRKFTNGYKLKQHMLTH 133
+ Y C + C++KF LK H+LTH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.1 bits (62), Expect = 0.12
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 21 KVECPVCGKVLSRKSKLVSHMRSFHT 46
K CP C V++RKS L H+R H+
Sbjct: 2 KFHCPHCDTVIARKSDLGVHLRKQHS 27
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 28.8 bits (64), Expect = 0.12
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 111 YPCEQCDRKFTNGYKLKQHMLTH 133
PC C + FT+ +L+QH H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 28.0 bits (62), Expect = 0.14
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRH 174
+ FKC+ C + TK NL H+K+ H
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFH 26
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 27.0 bits (59), Expect = 0.29
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 23 ECPVCGKVLSRKSKLVSHMRS 43
+C VCGK SRK KL +HMR
Sbjct: 3 KCEVCGKCFSRKDKLKTHMRC 23
Score = 25.0 bits (54), Expect = 1.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 82 PVECSYCGKVLSRKDKLTRHI 102
P +C CGK SRKDKL H+
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHM 21
Score = 23.9 bits (51), Expect = 3.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 292 PFVCNICGKDFKLKYYVNLHMRTHT 316
P C +CGK F K + HMR HT
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHT 25
Score = 23.1 bits (49), Expect = 6.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 207 PYHCKYCDKTFTKRMNVKTHER 228
P+ C+ C K F+++ +KTH R
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMR 22
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 27.1 bits (60), Expect = 0.34
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTR 317
KPF C+ICG+ F H + H R
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIHLR 28
Score = 24.4 bits (53), Expect = 2.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTHMQ 135
K + C+ C RKF + K+H H++
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIHLR 28
Score = 22.9 bits (49), Expect = 8.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 82 PVECSYCGKVLSRKDKLTRH 101
P C CG+ +R D+ RH
Sbjct: 3 PFACDICGRKFARSDERKRH 22
>d2fzcb2 g.41.7.1 (B:101-153) Aspartate carbamoyltransferase,
Regulatory-chain, C-terminal domain {Escherichia coli
[TaxId: 562]}
Length = 53
Score = 27.4 bits (61), Expect = 0.44
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 189 CYTNRELEEHQ-ILTHGAEP--YHCKYCDKTFTKR 220
C ++ E + A CKYC+K F+
Sbjct: 14 CISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHN 48
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 26.8 bits (59), Expect = 0.63
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 282 KHMALHSDAKPFVCNIC--GKDFKLKYYVNLHMRTHT 316
K F C K FK +Y + H++TH
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL 44
Score = 25.3 bits (55), Expect = 2.0
Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Query: 94 RKDKLTRHIAAVHSGK---EYPCEQCDRKFTNGYKLKQHMLTH 133
+ + +++ E C + F Y ++ H+ TH
Sbjct: 3 PRGSIDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 23.4 bits (50), Expect = 9.0
Identities = 6/36 (16%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 338 KHMLVHDVEKSHLCFVCGAG--FVNDAGLKVHMRKH 371
+ +K+ C G F ++ H++ H
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 26.2 bits (57), Expect = 0.67
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTH 315
KP+ C +CG FK K ++ H+R+H
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSH 26
Score = 25.0 bits (54), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 23 ECPVCGKVLSRKSKLVSHMRSFHTSVT 49
CPVCG RK ++ H+RS SV
Sbjct: 5 SCPVCGLRFKRKDRMSYHVRSHDGSVG 31
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 26.6 bits (58), Expect = 0.82
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 75 KKPKSRA----PVECSYCGKVLSRKDKLTRHIAAVHSGK 109
+KP+SR+ P C C V+ + L RH+ H K
Sbjct: 13 EKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK 51
>d1twfj_ a.4.11.1 (J:) RNA polymerase subunit RPB10 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 65
Score = 26.5 bits (59), Expect = 0.97
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 82 PVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNGYKLKQHMLTHMQKDTSIS 141
PV C CGKV+ DK ++ + + R Y ++ +LTH
Sbjct: 4 PVRCFSCGKVVG--DKWESYLNLLQEDELDEGTALSRLGLKRYCCRRMILTH-------- 53
Query: 142 IDVISEIKKF 151
+D+I + ++
Sbjct: 54 VDLIEKFLRY 63
>d1rwja_ a.138.1.1 (A:) Cytochrome c7 (cytochrome c551.5, PpcA)
{Geobacter sulfurreducens, GSU1996 [TaxId: 35554]}
Length = 81
Score = 27.1 bits (60), Expect = 1.1
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 315 HTRIRPTFECDVCHQ-IFPTDFRTKHMLVHDVEKSHLCFVC 354
H ++C+ CH +F K + D++K C C
Sbjct: 23 HEFHLGMYKCNECHTKLFAYKAGAKRFTMADMDKGKSCGAC 63
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 25.4 bits (55), Expect = 1.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 295 CNICGKDFKLKYYVNLHMRTHT 316
C C K F KYY+ +H R HT
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHT 24
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 25.4 bits (56), Expect = 1.3
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTRIR 319
+ + C+ C ++F+ + HM H R R
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 25.1 bits (55), Expect = 1.9
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTHMQK 136
+ Y C C R+F + L HM H +
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRD 31
Score = 24.7 bits (54), Expect = 3.0
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 347 KSHLCFVCGAGFVNDAGLKVHMRKH 371
+S+ C C F + L HM H
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVH 28
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 25.0 bits (54), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 149 KKFKCDQCDYATKDKYNLGTHIKRRHT 175
+ FKC C YA+++ L H+ R HT
Sbjct: 2 RPFKCQICPYASRNSSQLTVHL-RSHT 27
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.8 bits (57), Expect = 1.9
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 204 GAEPYHCKYCDKTFTKRMNVKTHERMKHENHK 235
G + C C + F N+KTH R K +HK
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFRSK--DHK 41
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 24.2 bits (52), Expect = 2.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 24 CPVCGKVLSRKSKLVSHMRSFH 45
CP C K +RK + +H++ H
Sbjct: 4 CPFCFKEFTRKDNMTAHVKIIH 25
Score = 23.5 bits (50), Expect = 5.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 85 CSYCGKVLSRKDKLTRHIAAVH 106
C +C K +RKD +T H+ +H
Sbjct: 4 CPFCFKEFTRKDNMTAHVKIIH 25
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 24.6 bits (53), Expect = 2.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTRIRP 320
K C ICGK F+ Y++N H +H+ +P
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKP 33
Score = 24.3 bits (52), Expect = 4.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTH 133
K+ CE C + F + Y L +H L+H
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSH 28
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 24.3 bits (53), Expect = 3.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 295 CNICGKDFKLKYYVNLHMRTHTR 317
C+ + FK +Y + +HMR HT
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTG 32
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 24.3 bits (52), Expect = 3.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 85 CSYCGKVLSRKDKLTRH 101
CS CGK +R++ + RH
Sbjct: 7 CSKCGKTFTRRNTMARH 23
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 23.9 bits (51), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 293 FVCNICGKDFKLKYYVNLHMRTHT 316
F C++C + F+ + + LHM +HT
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHT 28
>d1mgra_ d.1.1.2 (A:) Cytotoxic RNase Sa3 {Streptomyces aureofaciens
[TaxId: 1894]}
Length = 97
Score = 25.5 bits (56), Expect = 4.4
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 297 ICGKDFKLKYYVNLHMRTHTRIRPT 321
I G+ ++ YY H + R+
Sbjct: 72 ITGQQWQEDYYTADHYASFRRVDFA 96
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.4 bits (50), Expect = 5.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 109 KEYPCEQCDRKFTNGYKLKQHMLTH 133
+ + C +C + F KLK+H L H
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVH 25
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.6 bits (50), Expect = 5.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 148 IKKFKCDQCDYATKDKYNLGTHIK 171
+K +KC CDYA D +L H++
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLR 24
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 23.9 bits (51), Expect = 5.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 235 KPYECYICNKILVSRGRLNEH 255
KPYEC IC K + R + H
Sbjct: 4 KPYECNICAKRFMWRDSFHRH 24
Score = 23.6 bits (50), Expect = 9.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 291 KPFVCNICGKDFKLKYYVNLHMRTHTR 317
KP+ CNIC K F + + H+ + T+
Sbjct: 4 KPYECNICAKRFMWRDSFHRHVTSCTK 30
>d1fgja_ a.138.1.3 (A:) Hydroxylamine oxidoreductase, HAO
{Nitrosomonas europaea [TaxId: 915]}
Length = 499
Score = 26.5 bits (57), Expect = 6.1
Identities = 14/121 (11%), Positives = 27/121 (22%), Gaps = 9/121 (7%)
Query: 260 HLAQRFECKLCHKTIVSEKTFKKHMALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIR 319
+A+R +C CH + H++ K + + R
Sbjct: 72 EVAERKDCVECHSDETPVWVRAWKRSTHANLDKIRNLKSDDPLYYKKGKLEEVENNLRSM 131
Query: 320 PTFE---------CDVCHQIFPTDFRTKHMLVHDVEKSHLCFVCGAGFVNDAGLKVHMRK 370
C CH + H + + C C + +
Sbjct: 132 GKLGEKETLKEVGCIDCHVDVNKKDKADHTKDIRMPTADTCGTCHLREFAERESERDTMV 191
Query: 371 H 371
Sbjct: 192 W 192
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 26.2 bits (56), Expect = 6.5
Identities = 12/99 (12%), Positives = 21/99 (21%), Gaps = 1/99 (1%)
Query: 169 HIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKRMNVKTHER 228
+ L CG G T L T + + R
Sbjct: 30 KCVENNLVFDDYLDLACGTGNLT-ENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRL 88
Query: 229 MKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFEC 267
+ + I N ++ L + F+
Sbjct: 89 ACQDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFKA 127
>d2imla1 b.45.1.4 (A:1-189) Hypothetical protein AF1834
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 189
Score = 26.0 bits (57), Expect = 6.6
Identities = 3/37 (8%), Positives = 10/37 (27%)
Query: 306 YYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHMLV 342
MR+ + ++ + R ++
Sbjct: 101 CRFEAEMRSGVAHLKLTDGEIIEKRVRAINRGLSAVI 137
>d1qxfa_ g.41.8.4 (A:) Ribosomal protein S27e {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 58
Score = 23.9 bits (52), Expect = 7.8
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 17 SKYIKVECPVCGKV 30
S+++KV+CP C
Sbjct: 3 SRFVKVKCPDCEHE 16
>d1i7da_ e.10.1.1 (A:) DNA topoisomerase III {Escherichia coli
[TaxId: 562]}
Length = 620
Score = 26.1 bits (56), Expect = 7.9
Identities = 19/236 (8%), Positives = 40/236 (16%), Gaps = 10/236 (4%)
Query: 111 YPCEQCDRKFTNGYKLKQHMLTHMQKDTSISIDVISEIKKFKCDQCDYAT-----KDKYN 165
+ + K + H+ I + + D +
Sbjct: 205 LVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEH 264
Query: 166 LGTHIKRRHTKEYSVLCTQCGFGCYTNRELEEHQILTHGAEPYHCKYCDKTFTKR-MNVK 224
+ I + S + L QI + K K
Sbjct: 265 VVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHK 324
Query: 225 THERMKHENHKPYECYICNKILVSRGRLNEHLNQVHLAQRFECKLCHKTIVSEKTFKKHM 284
+ + E + + +N K
Sbjct: 325 LITFPRSDCRYLPEEHFAGR----HAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDA 380
Query: 285 ALHSDAKPFVCNICGKDFKLKYYVNLHMRTHTRIRPTFECDVCHQIFPTDFRTKHM 340
I + + K Y + + + P C
Sbjct: 381 HHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVA 436
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 23.1 bits (49), Expect = 8.2
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 109 KEYPC--EQCDRKFTNGYKLKQHMLTH 133
K +PC E C++ FT+ + L +H LTH
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTH 27
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 23.0 bits (49), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 207 PYHCKYCDKTFTKRMNVKTHERMKHENHK 235
PYHC YC+ +F + N+ H + K + K
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKSKAHSKK 29
>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 73
Score = 24.2 bits (53), Expect = 8.6
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 10/46 (21%)
Query: 78 KSRAPVECSYCGKVLSRKDKLTRHIAAVHSGKEYPCEQCDRKFTNG 123
+ C CG +D++ R + + C CD KFT G
Sbjct: 23 EMNEDHACPNCG-----EDRVDRQGTGI-----WQCSYCDYKFTGG 58
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 28
Score = 22.7 bits (48), Expect = 9.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 82 PVECSYCGKVLSRKDKLTRHIA 103
P EC CGK RK+ L H A
Sbjct: 1 PFECPKCGKCYFRKENLLEHEA 22
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.135 0.428
Gapped
Lambda K H
0.267 0.0574 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,382,552
Number of extensions: 66312
Number of successful extensions: 778
Number of sequences better than 10.0: 1
Number of HSP's gapped: 765
Number of HSP's successfully gapped: 297
Length of query: 372
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 285
Effective length of database: 1,213,086
Effective search space: 345729510
Effective search space used: 345729510
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 54 (24.9 bits)