Your job contains 1 sequence.
>psy16837
MLCCCCCIPTGSGGQWPCLEYKAANKRRSHPRLTARHGDTPLPTIVSAQPPSGGAFYNYL
SAWSTNDALSYGASQCSLRPEPKPWLHVSNDYELKIPKSAPLIYAQIPVSLNNLYTTRDI
TELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAILMGAPGPSSSLPGGG
ASTCSSDSQSTTSSSSSTGGGAGD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16837
(204 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0003892 - symbol:ptc "patched" species:7227 "Droso... 313 7.7e-28 2
ZFIN|ZDB-GENE-980526-196 - symbol:ptch1 "patched 1" speci... 268 9.8e-22 1
UNIPROTKB|F1MVV4 - symbol:PTCH1 "Uncharacterized protein"... 259 1.8e-21 1
UNIPROTKB|Q6UY90 - symbol:Ptch1 "Protein Ptch1" species:1... 263 3.2e-21 1
MGI|MGI:105373 - symbol:Ptch1 "patched homolog 1" species... 260 6.7e-21 1
UNIPROTKB|F1PNE0 - symbol:PTCH1 "Uncharacterized protein"... 260 6.8e-21 1
UNIPROTKB|Q90693 - symbol:PTCH1 "Protein patched homolog ... 259 8.6e-21 1
ZFIN|ZDB-GENE-980526-44 - symbol:ptch2 "patched 2" specie... 259 8.6e-21 1
UNIPROTKB|I3LVF2 - symbol:PTCH1 "Uncharacterized protein"... 259 8.7e-21 1
UNIPROTKB|Q13635 - symbol:PTCH1 "Protein patched homolog ... 255 2.3e-20 1
WB|WBGene00004208 - symbol:ptc-1 species:6239 "Caenorhabd... 232 6.3e-18 1
WB|WBGene00004210 - symbol:ptc-3 species:6239 "Caenorhabd... 230 9.9e-18 1
UNIPROTKB|E2RHI9 - symbol:PTCH2 "Uncharacterized protein"... 210 1.1e-15 1
UNIPROTKB|F1NYG9 - symbol:PTCH1 "Protein patched homolog ... 208 2.1e-15 1
MGI|MGI:1095405 - symbol:Ptch2 "patched homolog 2" specie... 206 3.0e-15 1
UNIPROTKB|E1B778 - symbol:PTCH2 "Uncharacterized protein"... 206 3.0e-15 1
UNIPROTKB|Q9Y6C5 - symbol:PTCH2 "Protein patched homolog ... 204 4.9e-15 1
UNIPROTKB|F1LW60 - symbol:F1LW60 "Uncharacterized protein... 151 1.6e-09 1
WB|WBGene00004209 - symbol:ptc-2 species:6239 "Caenorhabd... 123 1.0e-06 1
>FB|FBgn0003892 [details] [associations]
symbol:ptc "patched" species:7227 "Drosophila melanogaster"
[GO:0008158 "hedgehog receptor activity" evidence=IMP;TAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS;TAS]
[GO:0007224 "smoothened signaling pathway"
evidence=IGI;NAS;IMP;TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IGI;TAS] [GO:0048099 "anterior/posterior lineage
restriction, imaginal disc" evidence=TAS] [GO:0007350 "blastoderm
segmentation" evidence=NAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=IMP] [GO:0030707 "ovarian follicle cell
development" evidence=TAS] [GO:0007422 "peripheral nervous system
development" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0004888 "transmembrane signaling receptor
activity" evidence=NAS] [GO:0048100 "wing disc anterior/posterior
pattern formation" evidence=TAS] [GO:0007455 "eye-antennal disc
morphogenesis" evidence=IMP] [GO:0016311 "dephosphorylation"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0009952
"anterior/posterior pattern specification" evidence=NAS]
[GO:0048103 "somatic stem cell division" evidence=TAS] [GO:0042078
"germ-line stem cell division" evidence=TAS] [GO:0042306
"regulation of protein import into nucleus" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035225
"determination of genital disc primordium" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0055088 "lipid homeostasis"
evidence=IMP] [GO:0030228 "lipoprotein particle receptor activity"
evidence=IDA] [GO:0008406 "gonad development" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 EMBL:AE013599 GO:GO:0007346
GO:GO:0048471 GO:GO:0007411 GO:GO:0005887 GO:GO:0008406
GO:GO:0030707 GO:GO:0006508 GO:GO:0007422 GO:GO:0035225
GO:GO:0055088 GO:GO:0016311 GO:GO:0030139 GO:GO:0007367
GO:GO:0042306 GO:GO:0007476 GO:GO:0009880 GO:GO:0007224
GO:GO:0030228 GO:GO:0001746 GO:GO:0007455 GO:GO:0008158
GO:GO:0048103 GO:GO:0042078 GO:GO:0045879 GO:GO:0048100
HOGENOM:HOG000228313 GO:GO:0048099 GeneTree:ENSGT00680000099777
eggNOG:NOG313603 KO:K06225 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:M28999 EMBL:M28418 EMBL:X17558 PIR:S06119 RefSeq:NP_523661.2
UniGene:Dm.2630 ProteinModelPortal:P18502 DIP:DIP-634N
STRING:P18502 TCDB:2.A.6.6.2 EnsemblMetazoa:FBtr0089427
GeneID:35851 KEGG:dme:Dmel_CG2411 UCSC:CG2411-RA CTD:35851
FlyBase:FBgn0003892 InParanoid:P18502 OrthoDB:EOG4BRV1N
PhylomeDB:P18502 GenomeRNAi:35851 NextBio:795513 Bgee:P18502
GermOnline:CG2411 Uniprot:P18502
Length = 1286
Score = 313 (115.2 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 57/100 (57%), Positives = 72/100 (72%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDYELKIPKSAPLIYAQIPVSLNNL 114
AFYNYLSAW+TND +YGASQ L PEP+ + H N+Y+LKIPKS PL+YAQ+P L+ L
Sbjct: 850 AFYNYLSAWATNDVFAYGASQGKLYPEPRQYFHQPNEYDLKIPKSLPLVYAQMPFYLHGL 909
Query: 115 YTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQF 154
T I LI +R + ++E GLPNYPSGI F FW+Q+
Sbjct: 910 TDTSQIKTLIGHIRDLSVKYEGFGLPNYPSGIPFIFWEQY 949
Score = 40 (19.1 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 5 CCCIPTGSGGQW---PCLEYKAANKRRS-HPRLTARHGDTPLP 43
CCC P P L N R + HP+ + + PLP
Sbjct: 597 CCCFPVWKEQPKVAPPVLPLNNNNGRGARHPK-SCNNNRVPLP 638
>ZFIN|ZDB-GENE-980526-196 [details] [associations]
symbol:ptch1 "patched 1" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0048635 "negative regulation of muscle organ
development" evidence=IGI] [GO:0010002 "cardioblast
differentiation" evidence=IGI] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IMP] [GO:0001957 "intramembranous
ossification" evidence=IMP] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-980526-196 GO:GO:0016021 GO:GO:0010002 GO:GO:0001649
GO:GO:0001957 GO:GO:0008158 GO:GO:0045879 GO:GO:0048635
GO:GO:0060042 GeneTree:ENSGT00680000099777 KO:K06225 CTD:5727
TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:CR847548 EMBL:CR376747
EMBL:CR382329 EMBL:CT027671 IPI:IPI00994727 RefSeq:XP_001922161.3
UniGene:Dr.116176 UniGene:Dr.81263 Ensembl:ENSDART00000121923
GeneID:30189 KEGG:dre:30189 NextBio:20806655 ArrayExpress:F1QRE4
Bgee:F1QRE4 Uniprot:F1QRE4
Length = 1475
Score = 268 (99.4 bits), Expect = 9.8e-22, P = 9.8e-22
Identities = 52/115 (45%), Positives = 68/115 (59%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YLSAW +ND ++Y ASQ ++RP P WLH D L IP + P+ YAQ P
Sbjct: 932 AFYIYLSAWVSNDPVAYAASQANIRPHPPEWLHDRTDSIPASRLNIPAAEPIEYAQFPFY 991
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T E I VR IC+ F +GLP+YP+G F FW+Q+ + + L+I
Sbjct: 992 LNGLRETPQFVEAIESVRAICNNFSRQGLPSYPNGYPFLFWEQYVGLRHWLLLSI 1046
>UNIPROTKB|F1MVV4 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR003392 Pfam:PF02460
GO:GO:0016020 GO:GO:0008158 GeneTree:ENSGT00680000099777
EMBL:DAAA02024005 IPI:IPI00694886 Ensembl:ENSBTAT00000013074
OMA:LATEFQE Uniprot:F1MVV4
Length = 584
Score = 259 (96.2 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 50/115 (43%), Positives = 70/115 (60%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YL+AW +ND ++Y ASQ ++RP W+H DY L+IP + P+ YAQ P
Sbjct: 353 AFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFY 412
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T D E I +VR IC+ + S GL +YP+G F FW+Q+ + + L+I
Sbjct: 413 LNGLRDTSDFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLSI 467
>UNIPROTKB|Q6UY90 [details] [associations]
symbol:Ptch1 "Protein Ptch1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005113 "patched binding"
evidence=IEA] [GO:0005119 "smoothened binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=ISS] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0008544 "epidermis development"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0010157 "response to chlorate" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0015485 "cholesterol binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016485
"protein processing" evidence=ISS] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=IEA] [GO:0021997 "neural plate
axis specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032880 "regulation of
protein localization" evidence=IEA] [GO:0035137 "hindlimb
morphogenesis" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=ISS] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043616 "keratinocyte proliferation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051782 "negative
regulation of cell division" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IEA] [GO:0061005 "cell
differentiation involved in kidney development" evidence=IEA]
[GO:0061053 "somite development" evidence=IEA] [GO:0071397
"cellular response to cholesterol" evidence=IEA] [GO:0072203 "cell
proliferation involved in metanephros development" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0097108 "hedgehog family protein binding" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 RGD:621425 GO:GO:0016021 GO:GO:0007346
GO:GO:0005794 GO:GO:0048471 GO:GO:0043616 GO:GO:0007420
GO:GO:0003007 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0009887
GO:GO:0030326 GO:GO:0060037 GO:GO:0001843 GO:GO:0040015
GO:GO:0005901 GO:GO:0043433 GO:GO:0009953 GO:GO:0030496
GO:GO:0060644 GO:GO:0008544 GO:GO:0016485 GO:GO:0050680
GO:GO:0001658 GO:GO:0072661 GO:GO:0035137 GO:GO:0007224
GO:GO:0045668 GO:GO:0008158 GO:GO:0051782 GO:GO:0021904
GO:GO:0021997 GO:GO:0008589 GO:GO:0045879 GO:GO:0060603
GO:GO:0061005 GO:GO:0072203 GO:GO:0010157
GeneTree:ENSGT00680000099777 eggNOG:NOG313603 KO:K06225 CTD:5727
HOGENOM:HOG000231331 HOVERGEN:HBG003801 OrthoDB:EOG40S0DT
TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:AY357891 IPI:IPI00396901
RefSeq:NP_446018.1 UniGene:Rn.102312 STRING:Q6UY90
Ensembl:ENSRNOT00000026287 GeneID:89830 KEGG:rno:89830
InParanoid:Q6UY90 NextBio:617756 Genevestigator:Q6UY90
Uniprot:Q6UY90
Length = 1434
Score = 263 (97.6 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 51/115 (44%), Positives = 70/115 (60%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YL+AW +ND ++Y ASQ ++RP W+H DY L+IP + P+ YAQ P
Sbjct: 904 AFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFY 963
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T D E I +VR IC+ + S GL +YP+G F FW+Q+ + + LAI
Sbjct: 964 LNGLRDTSDFVEAIEKVRVICNNYTSLGLSSYPNGYPFLFWEQYISLRHWLLLAI 1018
>MGI|MGI:105373 [details] [associations]
symbol:Ptch1 "patched homolog 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:0001841
"neural tube formation" evidence=IDA] [GO:0001843 "neural tube
closure" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0005113 "patched binding" evidence=IDA]
[GO:0005119 "smoothened binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=ISO;IDA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0005901
"caveola" evidence=ISO] [GO:0007165 "signal transduction"
evidence=IDA;TAS] [GO:0007224 "smoothened signaling pathway"
evidence=IGI;IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0008158 "hedgehog receptor activity" evidence=TAS] [GO:0008201
"heparin binding" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0008544 "epidermis development"
evidence=IMP] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IGI;IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI] [GO:0010157 "response to chlorate" evidence=IDA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=ISO] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0015485 "cholesterol binding" evidence=ISO;TAS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016485 "protein processing" evidence=IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0021532 "neural tube patterning" evidence=ISO]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IMP]
[GO:0021997 "neural plate axis specification" evidence=IMP]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI;IMP]
[GO:0030332 "cyclin binding" evidence=ISO;IPI] [GO:0030496
"midbody" evidence=IDA] [GO:0030879 "mammary gland development"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IDA;IMP]
[GO:0035108 "limb morphogenesis" evidence=ISO] [GO:0035137
"hindlimb morphogenesis" evidence=IMP] [GO:0040008 "regulation of
growth" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0043616 "keratinocyte proliferation"
evidence=IMP] [GO:0044294 "dendritic growth cone" evidence=ISO]
[GO:0044295 "axonal growth cone" evidence=ISO] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=ISO]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IGI;NAS;IMP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051782 "negative regulation of
cell division" evidence=IMP] [GO:0060037 "pharyngeal system
development" evidence=ISO] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IMP] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IMP] [GO:0060831 "smoothened
signaling pathway involved in dorsal/ventral neural tube
patterning" evidence=IMP] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IGI] [GO:0061053 "somite
development" evidence=ISO;IMP] [GO:0071397 "cellular response to
cholesterol" evidence=ISO] [GO:0072203 "cell proliferation involved
in metanephros development" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0072661 "protein targeting to plasma
membrane" evidence=ISO] [GO:0097108 "hedgehog family protein
binding" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:105373
GO:GO:0007346 GO:GO:0005794 GO:GO:0048471 GO:GO:0005576
GO:GO:0043616 GO:GO:0007420 GO:GO:0005887 GO:GO:0032403
GO:GO:0003007 GO:GO:0008270 GO:GO:0008201 GO:GO:0071397
GO:GO:0032880 GO:GO:0042593 Reactome:REACT_115202 GO:GO:0015485
GO:GO:0010875 GO:GO:0000122 GO:GO:0030326 GO:GO:0060037
GO:GO:0072372 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0030496 GO:GO:0060644 GO:GO:0008544
GO:GO:0016485 GO:GO:0050680 GO:GO:0001658 GO:GO:0072661
GO:GO:0035137 GO:GO:0045668 GO:GO:0008158 GO:GO:0051782
GO:GO:0021997 GO:GO:0045879 GO:GO:0060603 GO:GO:0060831
GO:GO:0061005 GO:GO:0072203 GO:GO:0005113 GO:GO:0061053
GO:GO:0010157 GeneTree:ENSGT00680000099777 eggNOG:NOG313603
KO:K06225 CTD:5727 HOGENOM:HOG000231331 HOVERGEN:HBG003801
OrthoDB:EOG40S0DT TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:U46155
IPI:IPI00117758 PIR:T30172 RefSeq:NP_032983.1 UniGene:Mm.228798
UniGene:Mm.488634 ProteinModelPortal:Q61115 STRING:Q61115
PhosphoSite:Q61115 PRIDE:Q61115 Ensembl:ENSMUST00000021921
GeneID:19206 KEGG:mmu:19206 UCSC:uc007qxv.1 InParanoid:Q61115
NextBio:295938 Bgee:Q61115 CleanEx:MM_PTCH1 Genevestigator:Q61115
GermOnline:ENSMUSG00000021466 Uniprot:Q61115
Length = 1434
Score = 260 (96.6 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 50/115 (43%), Positives = 70/115 (60%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YL+AW +ND ++Y ASQ ++RP W+H DY L+IP + P+ YAQ P
Sbjct: 904 AFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFY 963
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T D E I +VR IC+ + S GL +YP+G F FW+Q+ + + L+I
Sbjct: 964 LNGLRDTSDFVEAIEKVRVICNNYTSLGLSSYPNGYPFLFWEQYISLRHWLLLSI 1018
>UNIPROTKB|F1PNE0 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:AAEX03000490 Ensembl:ENSCAFT00000001978 Uniprot:F1PNE0
Length = 1449
Score = 260 (96.6 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YL+AW +ND ++Y ASQ ++RP W+H DY L+IP + P+ YAQ P
Sbjct: 915 AFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFY 974
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T D E I +VR IC+ + S GL +YP+G F FW+Q+ + + L++
Sbjct: 975 LNGLRDTSDFVEAIEKVRSICNNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLSV 1029
>UNIPROTKB|Q90693 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=NAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005887
GO:GO:0007224 GO:GO:0008158 eggNOG:NOG313603 KO:K06225 EMBL:U40074
IPI:IPI00593923 PIR:T18538 RefSeq:NP_990291.1 UniGene:Gga.474
ProteinModelPortal:Q90693 STRING:Q90693 GeneID:395806
KEGG:gga:395806 CTD:5727 HOGENOM:HOG000231331 HOVERGEN:HBG003801
InParanoid:Q90693 OrthoDB:EOG40S0DT NextBio:20815874
TIGRFAMs:TIGR00918 Uniprot:Q90693
Length = 1442
Score = 259 (96.2 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 49/115 (42%), Positives = 70/115 (60%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YL+AW +ND ++Y ASQ ++RP W+H DY L+IP + P+ YAQ P
Sbjct: 917 AFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFY 976
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T D E I +VR IC+ + S G+ +YP+G F FW+Q+ + + L+I
Sbjct: 977 LNGLRETSDFVEAIEKVRAICNNYTSLGIASYPNGYPFLFWEQYIGLRHWLLLSI 1031
>ZFIN|ZDB-GENE-980526-44 [details] [associations]
symbol:ptch2 "patched 2" species:7955 "Danio rerio"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0048635 "negative regulation of muscle organ
development" evidence=IGI] [GO:0010002 "cardioblast
differentiation" evidence=IGI] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IMP] [GO:0009954 "proximal/distal pattern
formation" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-980526-44 GO:GO:0016021 GO:GO:0010002 GO:GO:0043010
GO:GO:0001649 GO:GO:0009954 GO:GO:0007224 GO:GO:0008158
GO:GO:0031290 GO:GO:0048635 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00918 EMBL:BX649493 IPI:IPI00500992
Ensembl:ENSDART00000077304 ArrayExpress:F1Q8S0 Bgee:F1Q8S0
Uniprot:F1Q8S0
Length = 1442
Score = 259 (96.2 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 51/119 (42%), Positives = 68/119 (57%)
Query: 50 PPSGGAFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY---ELKIPKSAPLIYAQ 106
PP FY YL+ W +ND L Y ASQ + P P+ W+H D L+IP + PL +AQ
Sbjct: 905 PPE--VFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYDTTGENLRIPAAEPLEFAQ 962
Query: 107 IPVSLNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
P LN L D E I VR IC+EF +G+ NYP+G F FW+Q+ + +F L+I
Sbjct: 963 FPFYLNGLRQASDFIEAIESVRTICEEFMRQGIKNYPNGYPFLFWEQYIGLRHWFLLSI 1021
>UNIPROTKB|I3LVF2 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097108 "hedgehog family protein binding" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0072203 "cell proliferation involved in metanephros
development" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0061053 "somite development"
evidence=IEA] [GO:0061005 "cell differentiation involved in kidney
development" evidence=IEA] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0051782 "negative regulation of cell
division" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0021997 "neural plate axis specification"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=IEA] [GO:0010875
"positive regulation of cholesterol efflux" evidence=IEA]
[GO:0010157 "response to chlorate" evidence=IEA] [GO:0008589
"regulation of smoothened signaling pathway" evidence=IEA]
[GO:0008544 "epidermis development" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005901 "caveola" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005119 "smoothened binding"
evidence=IEA] [GO:0005113 "patched binding" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0007346
GO:GO:0005794 GO:GO:0048471 GO:GO:0043616 GO:GO:0007420
GO:GO:0003007 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0030326
GO:GO:0060037 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0030496 GO:GO:0060644 GO:GO:0008544
GO:GO:0016485 GO:GO:0050680 GO:GO:0001658 GO:GO:0072661
GO:GO:0035137 GO:GO:0007224 GO:GO:0045668 GO:GO:0008158
GO:GO:0051782 GO:GO:0021904 GO:GO:0021997 GO:GO:0045879
GO:GO:0060603 GO:GO:0061005 GO:GO:0072203 GO:GO:0010157
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:FP312856 EMBL:FP326685 Ensembl:ENSSSCT00000029331
Uniprot:I3LVF2
Length = 1453
Score = 259 (96.2 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 50/115 (43%), Positives = 70/115 (60%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YL+AW +ND ++Y ASQ ++RP W+H DY L+IP + P+ YAQ P
Sbjct: 921 AFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFY 980
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T D E I +VR IC+ + S GL +YP+G F FW+Q+ + + L+I
Sbjct: 981 LNGLRDTSDFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLSI 1035
>UNIPROTKB|Q13635 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0008544 "epidermis development"
evidence=IEA] [GO:0010157 "response to chlorate" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051782 "negative regulation of cell division"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IEA] [GO:0072203 "cell
proliferation involved in metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEP;ISS] [GO:0009887 "organ
morphogenesis" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0016485 "protein processing"
evidence=ISS] [GO:0030326 "embryonic limb morphogenesis"
evidence=ISS] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=ISS] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=ISS] [GO:0072001 "renal
system development" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005113 "patched binding" evidence=IPI]
[GO:0097108 "hedgehog family protein binding" evidence=IPI]
[GO:0005119 "smoothened binding" evidence=IPI] [GO:0030332 "cyclin
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IMP] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=ISS;TAS] [GO:0071397
"cellular response to cholesterol" evidence=ISS;IMP] [GO:0010875
"positive regulation of cholesterol efflux" evidence=IDA]
[GO:0015485 "cholesterol binding" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IDA]
[GO:0005901 "caveola" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0021997 "neural plate axis specification"
evidence=ISS] [GO:0007420 "brain development" evidence=ISS]
[GO:0060037 "pharyngeal system development" evidence=IMP]
[GO:0021532 "neural tube patterning" evidence=IMP] [GO:0061053
"somite development" evidence=IMP] [GO:0035108 "limb morphogenesis"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 GO:GO:0043231
GO:GO:0016021 GO:GO:0007346 GO:GO:0048471 Reactome:REACT_111102
GO:GO:0043616 GO:GO:0007420 GO:GO:0003007 GO:GO:0008201
GO:GO:0071397 GO:GO:0032880 GO:GO:0042593 GO:GO:0015485
GO:GO:0010875 GO:GO:0000122 GO:GO:0009887 GO:GO:0030326
GO:GO:0060037 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0009953 GO:GO:0030496
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:hedgehog_2pathway GO:GO:0060644
GO:GO:0008544 GO:GO:0016485 GO:GO:0050680 GO:GO:0001658
GO:GO:0072661 GO:GO:0035137 GO:GO:0007224 GO:GO:0045668
GO:GO:0008158 GO:GO:0051782 GO:GO:0021904
Pathway_Interaction_DB:glypican_3pathway GO:GO:0021997
GO:GO:0045879 Orphanet:93925 Orphanet:93924 Orphanet:280200
Orphanet:93926 Orphanet:220386 Orphanet:280195 GO:GO:0060603
GO:GO:0072001 GO:GO:0021532 GO:GO:0061005 GO:GO:0072203
GO:GO:0061053 GO:GO:0010157 eggNOG:NOG313603 KO:K06225 CTD:5727
HOVERGEN:HBG003801 OrthoDB:EOG40S0DT TIGRFAMs:TIGR00918 EMBL:U59464
EMBL:U43148 EMBL:AL161729 EMBL:AB189436 EMBL:AB189437 EMBL:AB189438
EMBL:AB189439 EMBL:AB189440 EMBL:BC043542 EMBL:AB239329
IPI:IPI00014374 IPI:IPI00643862 IPI:IPI00654901 IPI:IPI00844057
RefSeq:NP_000255.2 RefSeq:NP_001077071.1 RefSeq:NP_001077072.1
RefSeq:NP_001077073.1 RefSeq:NP_001077074.1 RefSeq:NP_001077075.1
RefSeq:NP_001077076.1 UniGene:Hs.494538 ProteinModelPortal:Q13635
SMR:Q13635 DIP:DIP-44940N STRING:Q13635 PhosphoSite:Q13635
DMDM:160415977 PRIDE:Q13635 DNASU:5727 Ensembl:ENST00000331920
Ensembl:ENST00000375274 Ensembl:ENST00000418258
Ensembl:ENST00000421141 Ensembl:ENST00000429896
Ensembl:ENST00000430669 Ensembl:ENST00000437951
Ensembl:ENST00000468211 Ensembl:ENST00000546820
Ensembl:ENST00000547672 Ensembl:ENST00000551845
Ensembl:ENST00000553011 GeneID:5727 KEGG:hsa:5727 UCSC:uc004avk.4
UCSC:uc004avm.4 UCSC:uc010mrr.3 GeneCards:GC09M098205
HGNC:HGNC:9585 HPA:CAB013717 MIM:109400 MIM:601309 MIM:605462
MIM:610828 neXtProt:NX_Q13635 Orphanet:377 PharmGKB:PA33937
InParanoid:Q13635 OMA:APDRDYL PhylomeDB:Q13635 ChiTaRS:PTCH1
GenomeRNAi:5727 NextBio:22266 ArrayExpress:Q13635 Bgee:Q13635
CleanEx:HS_PTCH1 Genevestigator:Q13635 GermOnline:ENSG00000185920
Uniprot:Q13635
Length = 1447
Score = 255 (94.8 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 50/115 (43%), Positives = 68/115 (59%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YL+AW +ND ++Y ASQ ++RP W+H DY L+IP + P+ YAQ P
Sbjct: 918 AFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFY 977
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T D E I +VR IC + S GL +YP+G F FW+Q+ + + L I
Sbjct: 978 LNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLFI 1032
>WB|WBGene00004208 [details] [associations]
symbol:ptc-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0005887
GO:GO:0051301 GO:GO:0007067 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0019915 GO:GO:0008158
GeneTree:ENSGT00680000099777 EMBL:Z46812 PIR:T27969
RefSeq:NP_495662.2 ProteinModelPortal:Q09614 STRING:Q09614
PaxDb:Q09614 EnsemblMetazoa:ZK675.1.1 EnsemblMetazoa:ZK675.1.2
GeneID:174274 KEGG:cel:CELE_ZK675.1 UCSC:ZK675.1.1 CTD:174274
WormBase:ZK675.1 eggNOG:NOG313603 HOGENOM:HOG000016673
InParanoid:Q09614 KO:K06225 OMA:CQFNYTI NextBio:883327
GermOnline:ZK675.1 Uniprot:Q09614
Length = 1408
Score = 232 (86.7 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 44/99 (44%), Positives = 56/99 (56%)
Query: 56 FYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDYELKIPKSAPLIYAQIPVSLNNLY 115
FYNYL+AW D + Y SQ S P P W N E IP + PL Y+QIP L L
Sbjct: 1078 FYNYLTAWFNVDHMMYYVSQASFFPTPPKWELSKNHTENFIPAAEPLAYSQIPFYLTGLT 1137
Query: 116 TTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQF 154
T I + I +R +C+ F +GLPN+P GI F FW+Q+
Sbjct: 1138 DTAVIVDAIKDIRSVCERFTDQGLPNFPQGIAFTFWEQY 1176
>WB|WBGene00004210 [details] [associations]
symbol:ptc-3 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0031410 "cytoplasmic vesicle" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0016324
GO:GO:0018996 GO:GO:0031410 GO:GO:0040011 GO:GO:0040018
GO:GO:0008158 GeneTree:ENSGT00680000099777 EMBL:FO081635
UniGene:Cel.5929 GeneID:173631 KEGG:cel:CELE_Y110A2AL.8 CTD:173631
RefSeq:NP_001122650.1 ProteinModelPortal:H2L0G5
EnsemblMetazoa:Y110A2AL.8c WormBase:Y110A2AL.8c OMA:MNPISAV
Uniprot:H2L0G5
Length = 1367
Score = 230 (86.0 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 46/116 (39%), Positives = 67/116 (57%)
Query: 51 PSGGAFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDYELKI-PKSAPLIYAQIPV 109
P G FYNYL+ W D + Y SQ S P P W + N+ K+ P + PL+Y+Q+P
Sbjct: 1037 PEG--FYNYLTGWFNVDNMMYYVSQASFYPTPPGWEY--NEKLAKVVPAAEPLLYSQMPF 1092
Query: 110 SLNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
N+L T I ++I ++R C+E+ +GL N+PSGI F FW+Q+ + F AI
Sbjct: 1093 YQNDLIDTPAIVKMIEEIRATCEEYSERGLSNHPSGIAFTFWEQYLTLRWNLFQAI 1148
>UNIPROTKB|E2RHI9 [details] [associations]
symbol:PTCH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 CTD:8643 KO:K11101
OMA:CPPSAPN EMBL:AAEX03009785 RefSeq:XP_539636.3
Ensembl:ENSCAFT00000007564 GeneID:482519 KEGG:cfa:482519
Uniprot:E2RHI9
Length = 1207
Score = 210 (79.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/113 (40%), Positives = 57/113 (50%)
Query: 56 FYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY---ELKIPKSAPLIYAQIPVSLN 112
FY L+ W ++D L ASQ + P P WLH D L+IP + PL +AQ P L
Sbjct: 856 FYVGLTMWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPAAQPLEFAQFPFLLR 915
Query: 113 NLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
L T D E I R C E G+ YPSG F FW+Q+ + YF LAI
Sbjct: 916 GLQKTADFVEAIEGARAACAEAGQAGVRAYPSGSPFLFWEQYLGLRRYFLLAI 968
>UNIPROTKB|F1NYG9 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005113 "patched binding"
evidence=IEA] [GO:0005119 "smoothened binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0008544 "epidermis
development" evidence=IEA] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IEA] [GO:0010157 "response to chlorate"
evidence=IEA] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0021997 "neural plate axis specification" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0035137 "hindlimb morphogenesis" evidence=IEA] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043616
"keratinocyte proliferation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051782 "negative regulation of cell division"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IEA] [GO:0061053 "somite
development" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0072203 "cell proliferation involved
in metanephros development" evidence=IEA] [GO:0072661 "protein
targeting to plasma membrane" evidence=IEA] [GO:0097108 "hedgehog
family protein binding" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0007346 GO:GO:0005794 GO:GO:0048471
GO:GO:0043616 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0040015
GO:GO:0005901 GO:GO:0043433 GO:GO:0030496 GO:GO:0016485
GO:GO:0050680 GO:GO:0072661 GO:GO:0007224 GO:GO:0045668
GO:GO:0008158 GO:GO:0051782 GO:GO:0045879 GO:GO:0010157
GeneTree:ENSGT00680000099777 IPI:IPI00593923 TIGRFAMs:TIGR00918
OMA:APDRDYL EMBL:AADN02067838 EMBL:AADN02067839 EMBL:AADN02067840
EMBL:AADN02067841 EMBL:AADN02067842 EMBL:AADN02067843
Ensembl:ENSGALT00000020601 Uniprot:F1NYG9
Length = 1303
Score = 208 (78.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 44/115 (38%), Positives = 64/115 (55%)
Query: 55 AFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY----ELKIPKSAPLIYAQIPVS 110
AFY YL+AW +N + ++RP W+H DY L+IP + P+ YAQ P
Sbjct: 786 AFYIYLTAWVSNPS--------NIRPHLPEWVHDKADYMPETRLRIPAAEPIEYAQFPFY 837
Query: 111 LNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
LN L T D E I +VR IC+ + S G+ +YP+G F FW+Q+ + + L+I
Sbjct: 838 LNGLRETSDFVEAIEKVRAICNNYTSLGIASYPNGYPFLFWEQYIGLRHWLLLSI 892
>MGI|MGI:1095405 [details] [associations]
symbol:Ptch2 "patched homolog 2" species:10090 "Mus
musculus" [GO:0005119 "smoothened binding" evidence=ISO]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0008544
"epidermis development" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042633 "hair cycle" evidence=IMP] [GO:0043588 "skin
development" evidence=IMP] [GO:0097108 "hedgehog family protein
binding" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:1095405
GO:GO:0016021 GO:GO:0043588 GO:GO:0008158 GO:GO:0042633
EMBL:AL671866 GeneTree:ENSGT00680000099777 eggNOG:NOG313603
HOGENOM:HOG000231331 HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 CTD:8643
KO:K11101 OMA:CPPSAPN OrthoDB:EOG49CQ6V EMBL:AJ133482 EMBL:AJ133483
EMBL:AJ133484 EMBL:AJ133485 EMBL:AB010833 IPI:IPI00131879
PIR:T13952 RefSeq:NP_032984.1 UniGene:Mm.287037
ProteinModelPortal:O35595 STRING:O35595 PhosphoSite:O35595
PRIDE:O35595 DNASU:19207 Ensembl:ENSMUST00000030443 GeneID:19207
KEGG:mmu:19207 UCSC:uc008uhx.1 InParanoid:A2AE82 NextBio:295942
Bgee:O35595 CleanEx:MM_PTCH2 Genevestigator:O35595
GermOnline:ENSMUSG00000028681 Uniprot:O35595
Length = 1182
Score = 206 (77.6 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 46/119 (38%), Positives = 59/119 (49%)
Query: 50 PPSGGAFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY---ELKIPKSAPLIYAQ 106
PP FY L+ W ++D L ASQ + P P WLH D L+IP + PL +AQ
Sbjct: 852 PPE--LFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPAAQPLEFAQ 909
Query: 107 IPVSLNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
P L+ L T D E I R C E G+ YPSG F FW+Q+ + F LA+
Sbjct: 910 FPFLLHGLQKTADFVEAIEGARAACTEAGQAGVHAYPSGSPFLFWEQYLGLRRCFLLAV 968
>UNIPROTKB|E1B778 [details] [associations]
symbol:PTCH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043588 "skin development" evidence=IEA] [GO:0042633
"hair cycle" evidence=IEA] [GO:0005119 "smoothened binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0043588
GO:GO:0008158 GO:GO:0042633 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00918 CTD:8643 KO:K11101 OMA:CPPSAPN EMBL:DAAA02009018
IPI:IPI00690516 RefSeq:XP_002686477.1 RefSeq:XP_584648.3
UniGene:Bt.30284 PRIDE:E1B778 Ensembl:ENSBTAT00000033308
GeneID:507948 KEGG:bta:507948 NextBio:20868285 Uniprot:E1B778
Length = 1207
Score = 206 (77.6 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 46/119 (38%), Positives = 58/119 (48%)
Query: 50 PPSGGAFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY---ELKIPKSAPLIYAQ 106
PP FY L+ W ++D L ASQ + P P WLH D L+IP + PL +AQ
Sbjct: 852 PPE--LFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPAAQPLEFAQ 909
Query: 107 IPVSLNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
P L L T D E I R C E G+ YPSG F FW+Q+ + F LA+
Sbjct: 910 FPFLLRGLQKTADFVEAIEGARAACAEASQAGVHAYPSGSPFLFWEQYLGLRRCFLLAV 968
>UNIPROTKB|Q9Y6C5 [details] [associations]
symbol:PTCH2 "Protein patched homolog 2" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042633 "hair cycle" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0097108 "hedgehog family protein
binding" evidence=TAS;IPI] [GO:0005119 "smoothened binding"
evidence=IPI] [GO:0008158 "hedgehog receptor activity"
evidence=TAS] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=TAS] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 Reactome:REACT_111102 GO:GO:0043588
Pathway_Interaction_DB:hedgehog_2pathway MIM:155255 GO:GO:0008158
EMBL:AL592166 GO:GO:0045879 Orphanet:141276 EMBL:AL136380
GO:GO:0042633 eggNOG:NOG313603 HOGENOM:HOG000231331
HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 MIM:605462 EMBL:AF091501
EMBL:AF087651 EMBL:AF119569 EMBL:AY358555 EMBL:AY359016
EMBL:AY438664 IPI:IPI00419647 IPI:IPI00471943 RefSeq:NP_001159764.1
RefSeq:NP_003729.3 UniGene:Hs.591497 ProteinModelPortal:Q9Y6C5
IntAct:Q9Y6C5 STRING:Q9Y6C5 PhosphoSite:Q9Y6C5 DMDM:12643356
PRIDE:Q9Y6C5 DNASU:8643 Ensembl:ENST00000372192
Ensembl:ENST00000447098 GeneID:8643 KEGG:hsa:8643 UCSC:uc010olf.2
UCSC:uc021omv.1 CTD:8643 GeneCards:GC01M045286 HGNC:HGNC:9586
HPA:HPA046839 MIM:603673 neXtProt:NX_Q9Y6C5 PharmGKB:PA33938
InParanoid:Q9Y6C5 KO:K11101 OMA:CPPSAPN OrthoDB:EOG49CQ6V
PhylomeDB:Q9Y6C5 GenomeRNAi:8643 NextBio:32403 ArrayExpress:Q9Y6C5
Bgee:Q9Y6C5 CleanEx:HS_PTCH2 Genevestigator:Q9Y6C5
GermOnline:ENSG00000117425 GO:GO:0097108 Uniprot:Q9Y6C5
Length = 1203
Score = 204 (76.9 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 46/119 (38%), Positives = 58/119 (48%)
Query: 50 PPSGGAFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY---ELKIPKSAPLIYAQ 106
PP FY L+ W ++D L ASQ + P P WLH D L+IP + PL +AQ
Sbjct: 852 PPE--LFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPPAQPLEFAQ 909
Query: 107 IPVSLNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
P L L T D E I R C E G+ YPSG F FW+Q+ + F LA+
Sbjct: 910 FPFLLRGLQKTADFVEAIEGARAACAEAGQAGVHAYPSGSPFLFWEQYLGLRRCFLLAV 968
>UNIPROTKB|F1LW60 [details] [associations]
symbol:F1LW60 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0043588 GO:GO:0008158 GO:GO:0042633
IPI:IPI00870096 Ensembl:ENSRNOT00000033843 Uniprot:F1LW60
Length = 948
Score = 151 (58.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 50 PPSGGAFYNYLSAWSTNDALSYGASQCSLRPEPKPWLHVSNDY---ELKIPKSAPLIYAQ 106
PP FY L+ W ++D L ASQ + P P WLH D L+IP + PL +AQ
Sbjct: 622 PPE--LFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPAAQPLEFAQ 679
Query: 107 IPVSLNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQFSQFKMYFFLAI 165
+ L+ L T D+ + R C E + G+ PSG F FW+Q+ + F L +
Sbjct: 680 FFL-LHGLQKTADLWKPSKGPRAACTEGQP-GVHAXPSGSPF-FWEQYXGLRRCFLLPV 735
>WB|WBGene00004209 [details] [associations]
symbol:ptc-2 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0040011 GO:GO:0019915 GO:GO:0008158 EMBL:FO080717
GeneTree:ENSGT00680000099777 KO:K06225 PIR:T16126
RefSeq:NP_495218.2 UniGene:Cel.32852 ProteinModelPortal:Q09540
SMR:Q09540 PaxDb:Q09540 EnsemblMetazoa:F21H12.4 GeneID:191745
KEGG:cel:CELE_F21H12.4 UCSC:F21H12.4 CTD:191745 WormBase:F21H12.4
eggNOG:NOG244490 InParanoid:Q09540 OMA:ANDNHAC NextBio:950188
Uniprot:Q09540
Length = 667
Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 107 IPVSLNNLYTTRDITELITQVRGICDEFESKGLPNYPSGIIFYFWQQF 154
IP L L T I + I +R +C+ F +GLPN+P GI F FW+Q+
Sbjct: 497 IPFYLTGLTDTAVIVDAIKDIRSVCERFTDQGLPNFPQGIAFTFWEQY 544
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.460 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 204 167 0.00075 108 3 11 22 0.36 32
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 605 (64 KB)
Total size of DFA: 181 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.19u 0.18s 17.37t Elapsed: 00:00:01
Total cpu time: 17.20u 0.18s 17.38t Elapsed: 00:00:01
Start: Thu Aug 15 14:13:38 2013 End: Thu Aug 15 14:13:39 2013