BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16840
(413 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 23/165 (13%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR---HCAENDSIGEHQYYR 199
+GM +LH R+P H NLKS N +V ++ ++V DFGL L+ + + G +
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE--- 204
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG---LYEPKGEDCEE 256
W APE+LRD + +K+DVY+F VIL E+ + P+G + G C+
Sbjct: 205 ---WMAPEVLRDEPS----NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
LE+ R+ P V A + CW P RP F TI L+ +
Sbjct: 258 -----LEIPRN-LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
+GM +LH R+P H +LKS N +V ++ ++V DFGL L+ + + +
Sbjct: 148 KGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK---ASXFLXSKXAAGTPE 204
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG---LYEPKGEDCEEPFR 259
W APE+LRD + +K+DVY+F VIL E+ + P+G + G C+
Sbjct: 205 WMAPEVLRDEPS----NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR--- 257
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
LE+ R+ P V A + CW P RP F TI L+ +
Sbjct: 258 --LEIPRN-LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3ET6|B Chain B, The Crystal Structure Of The Catalytic Domain Of A
Eukaryotic Guanylate Cyclase
Length = 190
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
MPR+ LFGDTVNTASRMES GE +IHIS AC L + + ERG + +KGKG + T
Sbjct: 122 MPRFXLFGDTVNTASRMESHGEAGQIHISEACYXCLRSKERFEIRERGNITVKGKGTMRT 181
Query: 61 YWL 63
Y L
Sbjct: 182 YLL 184
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 387 TIYFSDIVGFTAMSAESTPLE 407
T+ FSDIVGFT +++ S+PLE
Sbjct: 11 TVLFSDIVGFTEIASRSSPLE 31
>pdb|3ET6|A Chain A, The Crystal Structure Of The Catalytic Domain Of A
Eukaryotic Guanylate Cyclase
Length = 190
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
MPR+ LFGDTVNTASRMES GE +IHIS AC L + + ERG + +KGKG + T
Sbjct: 122 MPRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRSKERFEIRERGNITVKGKGTMRT 181
Query: 61 YWL 63
Y L
Sbjct: 182 YLL 184
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 387 TIYFSDIVGFTAMSAESTPLE 407
T+ FSDIVGFT +++ S+PLE
Sbjct: 11 TVLFSDIVGFTEIASRSSPLE 31
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 141 IPRQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
I RQ GM +LH I H +LKS+N + +++ DFGL ++ G HQ+
Sbjct: 113 IARQTARGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS----GSHQF 167
Query: 198 YR---SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPK 250
+ S+LW APE++R + Q +DVYAF ++L+E++ + P+ + E
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
G P+L +R +C + M +C + + RP FP I A ++ +
Sbjct: 227 GRGS---LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 141 IPRQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
I RQ GM +LH I H +LKS+N + +++ DFGL ++ G HQ+
Sbjct: 125 IARQTARGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQF 179
Query: 198 YR---SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPK 250
+ S+LW APE++R + Q +DVYAF ++L+E++ + P+ + E
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
G P+L +R +C + M +C + + RP FP I A ++ +
Sbjct: 239 GRGS---LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 141 IPRQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
I RQ GM +LH I H +LKS+N + +++ DFGL ++ G HQ+
Sbjct: 125 IARQTARGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQF 179
Query: 198 YR---SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPK 250
+ S+LW APE++R + Q +DVYAF ++L+E++ + P+ + E
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
G P+L +R +C + M +C + + RP FP I A ++ +
Sbjct: 239 GRGS---LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 142 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 196
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 255
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 256 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 143 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 197
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 257 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 120 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 174
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 234 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 120 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 174
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 234 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 117 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 171
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 230
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 231 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 115 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 169
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 115 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----GSHQFEQLSGS 169
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F + R GM +L + H NL + N +V +V ++ DFGL + ++G
Sbjct: 141 LLHFAADVAR-GMDYLSQKQF-IHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE- 248
+ W A E L + T +DV+++ V+L EI+ G P+ G C LYE
Sbjct: 199 R----LPVRWMAIESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 250
Query: 249 -PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQK 307
P+G E+P +C+ V MR CW E P RP F I L M + ++
Sbjct: 251 LPQGYRLEKPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 301
Query: 308 NIIDQMME 315
+ + E
Sbjct: 302 YVNTTLYE 309
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 143 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGS 197
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 257 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 135 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGS 189
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 248
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 249 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR---S 200
QGM +LH I H +LKS+N + +++ DFGL ++ G HQ+ + S
Sbjct: 115 QGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGS 169
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-R 259
+LW APE++R Q +DVYAF ++L+E++ + P+ + +
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQ-SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
P+L +R +C + M +C + + RP FP I A ++
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 29/178 (16%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIG--CHGNLKSSNCVVT--------SRWVLQVTDFGL-HE 182
L+N+ I R GM +LH I H +LKSSN ++ S +L++TDFGL E
Sbjct: 107 LVNWAVQIAR-GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165
Query: 183 LRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFG 242
+ + G + W APE++R + ++ +DV+++ V+L E++ PF
Sbjct: 166 WHRTTKMSAAGAYA------WMAPEVIRASMF----SKGSDVWSYGVLLWELLTGEVPFR 215
Query: 243 GC-GLYEPKGEDCEEPFRPNLELLRDSC-EPFVLACMRDCWAEAPESRPDFPTIRARL 298
G GL G + P + +C EPF M DCW P SRP F I +L
Sbjct: 216 GIDGLAVAYGVAMNKLALP----IPSTCPEPFA-KLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F + R GM +L + H +L + N +V +V ++ DFGL + ++G
Sbjct: 144 LLHFAADVAR-GMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE- 248
+ W A E L + T +DV+++ V+L EI+ G P+ G C LYE
Sbjct: 202 R----LPVRWMAIESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 253
Query: 249 -PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQK 307
P+G E+P +C+ V MR CW E P RP F I L M + ++
Sbjct: 254 LPQGYRLEKPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
Query: 308 NIIDQMME 315
+ + E
Sbjct: 305 YVNTTLYE 312
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F + R GM +L + H +L + N +V +V ++ DFGL + ++G
Sbjct: 134 LLHFAADVAR-GMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG--CG-LYE- 248
+ W A E L + T +DV+++ V+L EI+ G P+ G C LYE
Sbjct: 192 R----LPVRWMAIESLNYSVY----TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 243
Query: 249 -PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQK 307
P+G E+P +C+ V MR CW E P RP F I L M + ++
Sbjct: 244 LPQGYRLEKPL---------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 294
Query: 308 NIIDQMME 315
+ + E
Sbjct: 295 YVNTTLYE 302
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H NL+++N +V+ ++ DFGL L +N+ + W
Sbjct: 116 EGMAFIEERNY-IHRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 172
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 173 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 224
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 225 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G F+HR +L + N +V+ V +V+DFGL + + G+ + W
Sbjct: 119 EGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL--TKEASSTQDTGK----LPVKW 165
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
APE LR+ + + K+DV++F ++L EI GR R P KG + P
Sbjct: 166 TAPEALREK----KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 221
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
D C P V M++CW RP F +R +L+H+K
Sbjct: 222 ---------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G F+HR +L + N +V+ V +V+DFGL + + G+ + W
Sbjct: 134 EGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL--TKEASSTQDTGK----LPVKW 180
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
APE LR+ + + K+DV++F ++L EI GR R P KG + P
Sbjct: 181 TAPEALREK----KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 236
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
D C P V M++CW RP F +R +L+H+K
Sbjct: 237 ---------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLL 202
M +L + H +L + NC+V V++V DFGL L D+ H + +
Sbjct: 141 SAMEYLEKKNF-IHRDLAARNCLVGENHVVKVADFGLSRL---MTGDTYTAHAGAKFPIK 196
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEE 256
W APE L I K+DV+AF V+L EI P+ G L + KG E+
Sbjct: 197 WTAPESLAYNTFSI----KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQ 252
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P + C P V MR CW +P RP F + M
Sbjct: 253 P---------EGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G F+HR +L + N +V+ V +V+DFGL + + G+ + W
Sbjct: 306 EGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL--TKEASSTQDTGK----LPVKW 352
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
APE LR+ + + K+DV++F ++L EI GR R P KG + P
Sbjct: 353 TAPEALREK----KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 408
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
D C P V M++CW +RP F +R +L+H++
Sbjct: 409 ---------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 128 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 184
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G+ P+ ++ E +R
Sbjct: 185 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQNLERGYR-- 236
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 237 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 115 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 171
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 172 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 223
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 224 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L AE + ++ + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF--PIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 177 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 228
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 126 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 182
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 183 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 234
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 235 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 121 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 177
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 178 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 229
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 230 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 122 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 179 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 230
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 231 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G+ P+ ++ E +R
Sbjct: 177 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQNLERGYR-- 228
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G F+HR +L + N +V+ V +V+DFGL + + G+ + W
Sbjct: 125 EGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL--TKEASSTQDTGK----LPVKW 171
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEI--IGR----RGPFGGCGLYEPKGEDCEEP 257
APE LR+ + K+DV++F ++L EI GR R P KG + P
Sbjct: 172 TAPEALREAAF----STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 227
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
D C P V M++CW RP F +R +L+H+K
Sbjct: 228 ---------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 177 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 228
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 126 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 182
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 183 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 234
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 235 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 125 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 181
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 182 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 233
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 234 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 129 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKW 185
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 186 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 237
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 238 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 120 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G + P+ ++ E +R
Sbjct: 177 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR-- 228
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM F+ H +L+++N +V+ ++ DFGL L +N+ + W
Sbjct: 130 EGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKW 186
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG-EDCEEPFRPN 261
APE + I K+DV++F ++L EI+ R P+ G+ P+ ++ E +R
Sbjct: 187 TAPEAINYGTFTI----KSDVWSFGILLTEIVTHGRIPY--PGMTNPEVIQNLERGYR-- 238
Query: 262 LELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++R D+C + MR CW E PE RP F +R+ L+
Sbjct: 239 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC V + +++ DFG+ I E YYR
Sbjct: 137 GMAYLNANKF-VHRDLAARNCXVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 187
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ G E+
Sbjct: 188 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 235
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C +L MR CW P+ RP F I + +K
Sbjct: 236 VLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H NL + NC+V +++V DFGL L D+ H + + W
Sbjct: 327 AMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 382
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 383 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 433
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
+ R + C V MR CW P RP F I + M ++ +I D++ + + K+
Sbjct: 434 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKE 490
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 143 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTR--------DIYETDYYRKGGKG 193
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ G E+
Sbjct: 194 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 241
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 242 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 143 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 193
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ G E+
Sbjct: 194 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 241
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 242 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 172 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 222
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ G E+
Sbjct: 223 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 270
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 271 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H NL + NC+V +++V DFGL L D+ H + + W
Sbjct: 369 AMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 424
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 425 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 475
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
+ R + C V MR CW P RP F I + M ++ +I D++ + + K+
Sbjct: 476 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKE 532
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 141 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 191
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ G E+
Sbjct: 192 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 239
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 240 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 150 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 200
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ G E+
Sbjct: 201 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 248
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 249 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 140 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 190
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ +G E+
Sbjct: 191 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQ 238
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 239 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 144 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 194
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ G E+
Sbjct: 195 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 242
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 243 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 137 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 187
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ +G E+
Sbjct: 188 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQ 235
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 236 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
QGM +LH I H ++KS+N + +++ DFGL ++ E Q S+LW
Sbjct: 143 QGMDYLHAKNI-IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE-QPTGSVLW 200
Query: 204 KAPELLR-DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF-RPN 261
APE++R + P + ++DVY++ ++L+E++ P+ + + P+
Sbjct: 201 MAPEVIRMQDNNPF--SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD 258
Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
L L +C + + DC + E RP FP I + ++ ++
Sbjct: 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ + H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 150 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM--------TRDIYETDYYRKGGKG 200
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEE 256
+ W +PE L+D T +DV++F V+L EI P+ G E+
Sbjct: 201 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQ 248
Query: 257 PFRPNLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
R +E LL D+C + MR CW P+ RP F I + +K
Sbjct: 249 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H NL + NC+V +++V DFGL L D+ H + + W
Sbjct: 330 AMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 385
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 386 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 436
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
+ R + C V MR CW P RP F I + M ++ +I D++ + + K+
Sbjct: 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKR 493
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
G+ F+HR +L + NC+V V+++ DFG+ + + +G R++L
Sbjct: 176 GLHFVHR-------DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG----RTMLPI 224
Query: 203 -WKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
W PE L R + T ++DV++F V+L EI +G Y+ + +
Sbjct: 225 RWMPPESILYR------KFTTESDVWSFGVVLWEIF----TYGKQPWYQLSNTEAIDCIT 274
Query: 260 PNLELLRD-SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
EL R +C P V A MR CW P+ R + ARL+ +
Sbjct: 275 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
+ R + C V MR CW P RP F I + M ++ +I D++ + + KQ
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKQ 291
>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3.
pdb|2WZ1|B Chain B, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3
Length = 219
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAAL----DKLGGYIVEERGVVCMKGKG 56
MPRYCLFG+TVN SR E+TGE +I++S L + + +E RG V MKGK
Sbjct: 130 MPRYCLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKK 189
Query: 57 EVLTYWLV 64
E + W +
Sbjct: 190 EPMQVWFL 197
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
G+ F+HR +L + NC+V V+++ DFG+ + + +G R++L
Sbjct: 153 GLHFVHR-------DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG----RTMLPI 201
Query: 203 -WKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
W PE L R + T ++DV++F V+L EI +G Y+ + +
Sbjct: 202 RWMPPESILYR------KFTTESDVWSFGVVLWEIF----TYGKQPWYQLSNTEAIDCIT 251
Query: 260 PNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
EL R +C P V A MR CW P+ R + ARL+ +
Sbjct: 252 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
G+ F+HR +L + NC+V V+++ DFG+ + + +G R++L
Sbjct: 147 GLHFVHR-------DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG----RTMLPI 195
Query: 203 -WKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
W PE L R + T ++DV++F V+L EI +G Y+ + +
Sbjct: 196 RWMPPESILYR------KFTTESDVWSFGVVLWEIF----TYGKQPWYQLSNTEAIDCIT 245
Query: 260 PNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
EL R +C P V A MR CW P+ R + ARL+ +
Sbjct: 246 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
GM +L+ + H +L + NC+V + +++ DFG+ R E D + + LL
Sbjct: 135 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMT--RDIXETDX--XRKGGKGLLPV 189
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRP 260
W +PE L+D T +DV++F V+L EI P+ G E+ R
Sbjct: 190 RWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPYQGLS--------NEQVLRF 237
Query: 261 NLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+E LL D+C +L MR CW P+ RP F I + +K
Sbjct: 238 VMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 35/199 (17%)
Query: 111 AHRPQETLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
AH + ++KLR+ + DI + I Y+ N ++P H +L+S N + S
Sbjct: 116 AHPIKWSVKLRLML--DIALGIEYMQN--------------QNPPIVHRDLRSPNIFLQS 159
Query: 170 R-----WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADV 224
+V DFGL + + + +G Q W APE + T+KAD
Sbjct: 160 LDENAPVCAKVADFGLSQQSVHSVSGLLGNFQ------WMAPETIGAEEESY--TEKADT 211
Query: 225 YAFAVILHEIIGRRGPFGGCGLYEPKGEDC--EEPFRPNLELLRDSCEPFVLACMRDCWA 282
Y+FA+IL+ I+ GPF + K + EE RP + + C P + + CW+
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWS 268
Query: 283 EAPESRPDFPTIRARLKHM 301
P+ RP F I L +
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY++ + W APE L D T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKNTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 35/177 (19%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F I +GM F+ + H +L+++N +V++ V ++ DFGL R +N+
Sbjct: 113 LIDFSAQIA-EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLA--RVIEDNEYTA 168
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGC-------- 244
+ W APE + I K+DV++F ++L EI+ R P+ G
Sbjct: 169 REGAKFPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
Query: 245 ---GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
G P+ E+C E + M CW PE RP F I++ L
Sbjct: 225 LERGYRMPRPENCPEE---------------LYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 35/177 (19%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F I +GM F+ + H +L+++N +V++ V ++ DFGL R +N+
Sbjct: 286 LIDFSAQIA-EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGL--ARVIEDNEYTA 341
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGC-------- 244
+ W APE + I K+DV++F ++L EI+ R P+ G
Sbjct: 342 REGAKFPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 397
Query: 245 ---GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
G P+ E+C E + M CW PE RP F I++ L
Sbjct: 398 LERGYRMPRPENCPEE---------------LYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++FG + R GM +L H +L + NC++ + ++V DFGL E S+
Sbjct: 126 LISFGLQVAR-GMEYLAEQKF-VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------------ 240
+H++ R + W A E L+ R T K+DV++F V+L E++ R P
Sbjct: 184 QHRHARLPVKWTALESLQT----YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH 239
Query: 241 FGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
F G P+ E C + + M+ CW P RP F
Sbjct: 240 FLAQGRRLPQPEYCPDS---------------LYQVMQQCWEADPAVRPTF 275
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 189 SYDINRVPEEQMTFK-----DLVSCTYQLA-------RGMEYLA-SQKCIHRDLAARNVL 235
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 236 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 283
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 284 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 334
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 335 YMMMRDCWHAVPSQRPTF 352
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 181 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 227
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
V+++ DFGL H + YY+ + W APE L D T ++D
Sbjct: 228 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 275
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
V++F V+L EI G P+ G + E +G ++P +C + M
Sbjct: 276 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 326
Query: 278 RDCWAEAPESRPDF 291
RDCW P RP F
Sbjct: 327 RDCWHAVPSQRPTF 340
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 140 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 186
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
V+++ DFGL H + YY+ + W APE L D T ++D
Sbjct: 187 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 234
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
V++F V+L EI G P+ G + E +G ++P +C + M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 285
Query: 278 RDCWAEAPESRPDF 291
RDCW P RP F
Sbjct: 286 RDCWHAVPSQRPTF 299
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 190 VTENNVMRIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
M +L + H +L + NC+V +++V DFGL L + ++ + W
Sbjct: 124 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWT 180
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLE 263
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 181 APESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDYR 231
Query: 264 LLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
+ R + C V MR CW P RP F I + M ++ +I D++ + + KQ
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM--FQESSISDEVEKELGKQ 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ H NL + NC+V + +++ DFG+ I E YYR
Sbjct: 143 GMAYLNAKKF-VHRNLAARNCMVAHDFTVKIGDFGM--------TRDIYETDYYRKGGKG 193
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
+ W APE L+D T +D+++F V+L EI P+ G + G
Sbjct: 194 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 249
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++P D+C V MR CW P RP F I LK
Sbjct: 250 GYLDQP---------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 190 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 237
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 288
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 289 YMMMRDCWHAVPSQRPTF 306
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ H NL + NC+V + +++ DFG+ I E YYR
Sbjct: 142 GMAYLNAKKF-VHRNLAARNCMVAHDFTVKIGDFGM--------TRDIYETDYYRKGGKG 192
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
+ W APE L+D T +D+++F V+L EI P+ G + G
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++P D+C V MR CW P RP F I LK
Sbjct: 249 GYLDQP---------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 135 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 181
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 182 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 229
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 230 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 280
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 281 YMMMRDCWHAVPSQRPTF 298
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 132 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 178
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 179 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 226
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 227 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 277
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 278 YMMMRDCWHAVPSQRPTF 295
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 136 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 191
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 192 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 242
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 243 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 133 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 179
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
V+++ DFGL H + YY+ + W APE L D T ++D
Sbjct: 180 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 227
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
V++F V+L EI G P+ G + E +G ++P +C + M
Sbjct: 228 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 278
Query: 278 RDCWAEAPESRPDF 291
RDCW P RP F
Sbjct: 279 RDCWHAVPSQRPTF 292
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 130 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLTARNVL 176
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGT 219
VT V+++ DFGL I YY+ + W APE L D T
Sbjct: 177 VTENNVMKIADFGLAR--------DINNIDYYKKTTNGRLPVKWMAPEALFDRVY----T 224
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV++F V++ EI G P+ G + E +G ++P +C +
Sbjct: 225 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNEL 275
Query: 274 LACMRDCWAEAPESRPDF 291
MRDCW P RP F
Sbjct: 276 YMMMRDCWHAVPSQRPTF 293
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 140 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 186
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
V+++ DFGL H + YY+ + W APE L D T ++D
Sbjct: 187 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 234
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
V++F V+L EI G P+ G + E +G ++P +C + M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 285
Query: 278 RDCWAEAPESRPDF 291
RDCW P RP F
Sbjct: 286 RDCWHAVPSQRPTF 299
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 125 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 180
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 181 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 231
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 132 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 178
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
V+++ DFGL H + YY+ + W APE L D T ++D
Sbjct: 179 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 226
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
V++F V+L EI G P+ G + E +G ++P +C + M
Sbjct: 227 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 277
Query: 278 RDCWAEAPESRPDF 291
RDCW P RP F
Sbjct: 278 RDCWHAVPSQRPTF 291
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 125 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 180
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 181 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 231
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 129 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 175
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
V+++ DFGL H + YY+ + W APE L D T ++D
Sbjct: 176 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 223
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
V++F V+L EI G P+ G + E +G ++P +C + M
Sbjct: 224 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 274
Query: 278 RDCWAEAPESRPDF 291
RDCW P RP F
Sbjct: 275 RDCWHAVPSQRPTF 288
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 140 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 186
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
V+++ DFGL H + YY+ + W APE L D T ++D
Sbjct: 187 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 234
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
V++F V+L EI G P+ G + E +G ++P +C + M
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 285
Query: 278 RDCWAEAPESRPDF 291
RDCW P RP F
Sbjct: 286 RDCWHAVPSQRPTF 299
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 124 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKW 179
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 180 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 230
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 231 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 127 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 182
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 183 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 233
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 234 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 102 LDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLK 161
L + +N + ++P++ ++ D + + +L+ + + + GM FL S H +L
Sbjct: 125 LRSKRNEFVPYKPED-------LYKDFLTLEHLIXYSFQVAK-GMEFL-ASRKXIHRDLA 175
Query: 162 SSNCVVTSRWVLQVTDFGLHELRHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQ 220
+ N +++ + V+++ DFGL R ++ D + + L W APE + D I
Sbjct: 176 ARNILLSEKNVVKICDFGL--ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI---- 229
Query: 221 KADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRD 279
++DV++F V+L EI P+ G + E +E R D P + M D
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLD 286
Query: 280 CWAEAPESRPDFPTIRARLKHMKDGKQKN 308
CW P RP F + ++H+ + Q N
Sbjct: 287 CWHGEPSQRPTFSEL---VEHLGNLLQAN 312
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
GM +L+ + H +L + NC+V + +++ DFG+ R E D + + LL
Sbjct: 144 GMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMT--RDIXETDX--XRKGGKGLLPV 198
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCGLYEPKGEDCEEPFRP 260
W +PE L+D T +DV++F V+L EI P+ +G E+ R
Sbjct: 199 RWMSPESLKDGVF----TTYSDVWSFGVVLWEIATLAEQPY--------QGLSNEQVLRF 246
Query: 261 NLE--LLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+E LL D+C + MR CW P+ RP F I + +K
Sbjct: 247 VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 125 SHNPEEQLSSK-----DLVSCAYQVA-------RGMEYL-ASKKCIHRDLAARNVLVTED 171
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKAD 223
V+++ DFGL H + YY+ + W APE L D T ++D
Sbjct: 172 NVMKIADFGLARDIHHID--------YYKKTTNGRLPVKWMAPEALFDRIY----THQSD 219
Query: 224 VYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACM 277
V++F V+L EI G P+ G + E +G ++P +C + M
Sbjct: 220 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMM 270
Query: 278 RDCWAEAPESRPDF 291
RDCW P RP F
Sbjct: 271 RDCWHAVPSQRPTF 284
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 123 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKW 178
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 179 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 229
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 128 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNL 262
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 184 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDY 234
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 126 SDIIIITYLMNFGDGI-PRQ----------GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQ 174
S+ ++ YL + G G+ P Q GM FL H +L + NC+V ++
Sbjct: 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF-IHRDLAARNCLVDRDLCVK 144
Query: 175 VTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEI 234
V+DFG+ R+ ++ + + W APE+ + + K+DV+AF +++ E+
Sbjct: 145 VSDFGM--TRYVLDDQYVSSVGTKFPVKWSAPEVFH----YFKYSSKSDVWAFGILMWEV 198
Query: 235 IGR-RGPFGGCGLYEP-----KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR 288
+ P+ LY K +RP+L + M CW E PE R
Sbjct: 199 FSLGKMPYD---LYTNSEVVLKVSQGHRLYRPHL------ASDTIYQIMYSCWHELPEKR 249
Query: 289 PDFPTIRARLKHMKD 303
P F + + ++ +++
Sbjct: 250 PTFQQLLSSIEPLRE 264
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAE 188
+ T L GD GM +L S H +L + NC+VT + VL+++DFG+ E
Sbjct: 212 VKTLLQMVGDAAA--GMEYLE-SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVX 268
Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLY 247
S G Q + W APE L R + ++DV++F ++L E P+
Sbjct: 269 AASGGLRQV--PVKWTAPEALNYG----RYSSESDVWSFGILLWETFSLGASPYPNLSNQ 322
Query: 248 EPKGEDCEEPFR-PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
+ + E E+ R P EL C V M CWA P RP F TI L+ ++
Sbjct: 323 QTR-EFVEKGGRLPCPEL----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 35/188 (18%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L + D++ Y + +GM +L S H +L + N +VT
Sbjct: 140 SHNPEEQLSSK-----DLVSCAYQV-------ARGMEYL-ASKKCIHRDLAARNVLVTED 186
Query: 171 WVLQVTDFGL-HELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAV 229
V+++ DFGL ++ H + + W APE L D T ++DV++F V
Sbjct: 187 NVMKIADFGLARDIHHIDXXKKTTNGRL--PVKWMAPEALFDRIY----THQSDVWSFGV 240
Query: 230 ILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE 283
+L EI G P+ G + E +G ++P +C + MRDCW
Sbjct: 241 LLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------SNCTNELYMMMRDCWHA 291
Query: 284 APESRPDF 291
P RP F
Sbjct: 292 VPSQRPTF 299
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 26/163 (15%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +L + + H +L + NC+V V++V+DFG+ R ++ + W
Sbjct: 114 EGMAYLEEASV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 170
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
+PE+ + R + K+DV++F V++ E+ G YE + ED F
Sbjct: 171 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 221
Query: 259 R---PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
R P L V M CW E PE RP F + +L
Sbjct: 222 RLYKPRL------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 130 IITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAE 188
+ T L GD GM +L S H +L + NC+VT + VL+++DFG+ E
Sbjct: 212 VKTLLQMVGDAAA--GMEYLE-SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268
Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLY 247
S G Q + W APE L R + ++DV++F ++L E P+
Sbjct: 269 AASGGLRQV--PVKWTAPEALNYG----RYSSESDVWSFGILLWETFSLGASPYPNLSNQ 322
Query: 248 EPKGEDCEEPFR-PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
+ + E E+ R P EL C V M CWA P RP F TI L+ ++
Sbjct: 323 QTR-EFVEKGGRLPCPEL----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 136 LYKDFLTLEHLIXYSFQVAK-GMEFL-ASRKXIHRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 194 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 248
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 302
Query: 303 DGKQKN 308
+ Q N
Sbjct: 303 NLLQAN 308
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 141 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--------TRDIYETDYYRKGGKG 191
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
+ W APE L+D T +D+++F V+L EI P+ G + G
Sbjct: 192 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 247
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++P D+C V MR CW P+ RP F I LK
Sbjct: 248 GYLDQP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 123 GIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE 182
G + + I + L+++ + R GM FL S H +L + N +++ V+++ DFGL
Sbjct: 190 GFYKEPITMEDLISYSFQVAR-GMEFLS-SRKCIHRDLAARNILLSENNVVKICDFGLA- 246
Query: 183 LRHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-P 240
R +N D + + L W APE + D I T K+DV+++ V+L EI G P
Sbjct: 247 -RDIYKNPDYVRKGDTRLPLKWMAPESIFDK---IYST-KSDVWSYGVLLWEIFSLGGSP 301
Query: 241 FGGCGLYEPKGEDCEEPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
+ G + ED R + + + P + M DCW P+ RP F + +L
Sbjct: 302 YPGVQM----DEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 121 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTFTAHAGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCG---LYEPKGEDCEEPFR 259
APE L I K+DV+AF V+L EI P+ G +YE +D R
Sbjct: 177 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME-R 231
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P + C V MR CW P RP F I + M
Sbjct: 232 P------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM FL S H +L + NC++ ++ ++V DFGL + E DS+
Sbjct: 133 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 190
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 191 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 247 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +L + + H +L + NC+V V++V+DFG+ R ++ + W
Sbjct: 134 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 190
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
+PE+ + R + K+DV++F V++ E+ G YE + ED F
Sbjct: 191 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 241
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
R L + V M CW E PE RP F + +L + +
Sbjct: 242 RLYKPRLAST---HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLWKAPELLRDTHAPIRGTQKADVY 225
VT V+++ DFGL R D + R + W APE L D T ++DV+
Sbjct: 190 VTENNVMKIADFGLA--RDINNIDXXKKTTNGRLPVKWMAPEALFDRVY----THQSDVW 243
Query: 226 AFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRD 279
+F V++ EI G P+ G + E +G ++P +C + MRD
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNELYMMMRD 294
Query: 280 CWAEAPESRPDF 291
CW P RP F
Sbjct: 295 CWHAVPSQRPTF 306
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Query: 107 NHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCV 166
++ I P+E + + D++ TY + +GM +L S H +L + N +
Sbjct: 143 SYDINRVPEEQMTFK-----DLVSCTYQL-------ARGMEYLA-SQKCIHRDLAARNVL 189
Query: 167 VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLWKAPELLRDTHAPIRGTQKADVY 225
VT V+++ DFGL R D + R + W APE L D T ++DV+
Sbjct: 190 VTENNVMKIADFGLA--RDINNIDXXKKTTNGRLPVKWMAPEALFDRVY----THQSDVW 243
Query: 226 AFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRD 279
+F V++ EI G P+ G + E +G ++P +C + MRD
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------NCTNELYMMMRD 294
Query: 280 CWAEAPESRPDF 291
CW P RP F
Sbjct: 295 CWHAVPSQRPTF 306
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 111 AHRPQETLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
AH + ++KLR+ + DI + I Y+ N ++P H +L+S N + S
Sbjct: 116 AHPIKWSVKLRLML--DIALGIEYMQN--------------QNPPIVHRDLRSPNIFLQS 159
Query: 170 R-----WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADV 224
+V DFG + + + +G Q W APE + T+KAD
Sbjct: 160 LDENAPVCAKVADFGTSQQSVHSVSGLLGNFQ------WMAPETIGAEEESY--TEKADT 211
Query: 225 YAFAVILHEIIGRRGPFGGCGLYEPKGEDC--EEPFRPNLELLRDSCEPFVLACMRDCWA 282
Y+FA+IL+ I+ GPF + K + EE RP + + C P + + CW+
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWS 268
Query: 283 EAPESRPDFPTIRARLKHM 301
P+ RP F I L +
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
GM +L + H +L + N +V + ++++D GL + A+ YY+ S
Sbjct: 157 GMEYLSSHHV-VHKDLATRNVLVYDKLNVKISDLGLFREVYAAD--------YYKLLGNS 207
Query: 201 LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEP 257
LL W APE + I +D++++ V+L E+ G CG +D E
Sbjct: 208 LLPIRWMAPEAIMYGKFSI----DSDIWSYGVVLWEVFSY-GLQPYCGY---SNQDVVEM 259
Query: 258 FRPNLELLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
R N ++L D C +V A M +CW E P RP F I +RL+
Sbjct: 260 IR-NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 111 AHRPQETLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
AH + ++KLR+ + DI + I Y+ N ++P H +L+S N + S
Sbjct: 116 AHPIKWSVKLRLML--DIALGIEYMQN--------------QNPPIVHRDLRSPNIFLQS 159
Query: 170 R-----WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADV 224
+V DF L + + + +G Q W APE + T+KAD
Sbjct: 160 LDENAPVCAKVADFSLSQQSVHSVSGLLGNFQ------WMAPETIGAEEESY--TEKADT 211
Query: 225 YAFAVILHEIIGRRGPFGGCGLYEPKGEDC--EEPFRPNLELLRDSCEPFVLACMRDCWA 282
Y+FA+IL+ I+ GPF + K + EE RP + + C P + + CW+
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP---EDCPPRLRNVIELCWS 268
Query: 283 EAPESRPDFPTIRARLKHM 301
P+ RP F I L +
Sbjct: 269 GDPKKRPHFSYIVKELSEL 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM FL S H +L + NC++ ++ ++V DFGL + E DS+
Sbjct: 136 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 193
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 194 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 250 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM FL S H +L + NC++ ++ ++V DFGL + E DS+
Sbjct: 135 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 193 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 249 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 142 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--------TRDIYETDYYRKGGKG 192
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
+ W APE L+D T +D+++F V+L EI P+ G + G
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++P D+C V MR CW P+ RP F I LK
Sbjct: 249 GYLDQP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +L + + H +L + NC+V V++V+DFG+ R ++ + W
Sbjct: 114 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 170
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
+PE+ + R + K+DV++F V++ E+ G YE + ED F
Sbjct: 171 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 221
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
R L + V M CW E PE RP F + +L + +
Sbjct: 222 RLYKPRLAST---HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 26/169 (15%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +L + + H +L + NC+V V++V+DFG+ R ++ + W
Sbjct: 112 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 168
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
+PE+ + R + K+DV++F V++ E+ G YE + ED F
Sbjct: 169 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 219
Query: 259 R---PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG 304
R P L V M CW E PE RP F + +L + +
Sbjct: 220 RLYKPRL------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L+ H +L + NC+V + +++ DFG+ I E YYR
Sbjct: 142 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--------TRDIYETAYYRKGGKG 192
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKG 251
+ W APE L+D T +D+++F V+L EI P+ G + G
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
++P D+C V MR CW P+ RP F I LK
Sbjct: 249 GYLDQP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
M +L + H +L + NC+V +++V DFGL L + ++ + W
Sbjct: 125 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWT 181
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLE 263
APE L I K+DV+AF V+L EI P+ G L E +
Sbjct: 182 APESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDYR 232
Query: 264 LLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ R + C V MR CW P RP F I + M
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM FL S H +L + NC++ ++ ++V DFGL + E DS+
Sbjct: 140 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 197
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 198 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 253
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 254 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 296
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM FL S H +L + NC++ ++ ++V DFGL + E DS+
Sbjct: 135 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 193 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 249 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE 188
+++ L++F I +GM ++ R H +L+++N +V+ + ++ DFGL R +
Sbjct: 107 VLLPKLIDFSAQIA-EGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLA--RVIED 162
Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLY 247
N+ + W APE + I K+DV++F ++L+EI+ + P+ G
Sbjct: 163 NEYTAREGAKFPIKWTAPEAINFGCFTI----KSDVWSFGILLYEIVTYGKIPYPG---- 214
Query: 248 EPKGEDCEEPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
D + R ++C + M+ CW E E RP F +++ L
Sbjct: 215 -RTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 265
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----S 200
GM +L + H +L + N +V + ++++D GL + A+ YY+ S
Sbjct: 140 GMEYLSSHHV-VHKDLATRNVLVYDKLNVKISDLGLFREVYAAD--------YYKLLGNS 190
Query: 201 LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEP 257
LL W APE + I +D++++ V+L E+ G CG +D E
Sbjct: 191 LLPIRWMAPEAIMYGKFSI----DSDIWSYGVVLWEVFSY-GLQPYCGY---SNQDVVEM 242
Query: 258 FRPNLELLR--DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
R N ++L D C +V A M +CW E P RP F I +RL+
Sbjct: 243 IR-NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM FL H +L + NC++ ++ ++V DFGL + E DS+
Sbjct: 194 LIGFGLQVAK-GMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 251
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 252 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 308 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 350
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 121 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCG---LYEPKGEDCEEPFR 259
APE L I K+DV+AF V+L EI P+ G +YE +D R
Sbjct: 177 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME-R 231
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P + C V MR CW P RP F I + M
Sbjct: 232 P------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR-SLLW 203
M +L + H +L + NC+V +++V DFGL L D+ H + + W
Sbjct: 121 AMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKW 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCG---LYEPKGEDCEEPFR 259
APE L I K+DV+AF V+L EI P+ G +YE +D R
Sbjct: 177 TAPESLAYNKFSI----KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME-R 231
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P + C V MR CW P RP F I + M
Sbjct: 232 P------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +L + + H +L + NC+V V++V+DFG+ R ++ + W
Sbjct: 115 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 171
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
+PE+ + R + K+DV++F V++ E+ G YE + ED F
Sbjct: 172 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 222
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
R L + V M CW E PE RP F + +L + +
Sbjct: 223 RLYKPRLAST---HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +L + + H +L + NC+V V++V+DFG+ R ++ + W
Sbjct: 117 EGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGM--TRFVLDDQYTSSTGTKFPVKW 173
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG-----EDCEEPF 258
+PE+ + R + K+DV++F V++ E+ G YE + ED F
Sbjct: 174 ASPEVFSFS----RYSSKSDVWSFGVLMWEVFSE-----GKIPYENRSNSEVVEDISTGF 224
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
R L + V M CW E PE RP F + +L + +
Sbjct: 225 RLYKPRLAST---HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|1YK9|A Chain A, Crystal Structure Of A Mutant Form Of The Mycobacterial
Adenylyl Cyclase Rv1625c
Length = 204
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 3 RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYW 62
RYC++GD VN ASRMEST +I + L +++ ERG + +KGKG + T++
Sbjct: 124 RYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLKD--DFVLRERGHINVKGKGVMRTWY 181
Query: 63 LVG----ATEGAVQGRE 75
L+G A G V+G E
Sbjct: 182 LIGRKVAADPGEVRGAE 198
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 381 ESYDLVTIYFSDIVGFTAMSAESTPLE 407
+ YD ++ F+DIVGFT ++ + P +
Sbjct: 6 DKYDEASVLFADIVGFTERASSTAPAD 32
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
G+ LH +G G +LKS N +V + D GL +RH + D+I
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 196
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
+R + + APE+L D+ ++AD+YA ++ E I RR GG
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 255
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
+ E + CE+ RPN+ SCE V+A MR+CW +R I+
Sbjct: 256 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 315
Query: 296 ARLKHM 301
L +
Sbjct: 316 KTLSQL 321
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
G+ LH +G G +LKS N +V + D GL +RH + D+I
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 176
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
+R + + APE+L D+ ++AD+YA ++ E I RR GG
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 235
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
+ E + CE+ RPN+ SCE V+A MR+CW +R I+
Sbjct: 236 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 295
Query: 296 ARLKHM 301
L +
Sbjct: 296 KTLSQL 301
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLL 202
QGM +L + H +L + N +V ++++DFGL R E DS + Q +
Sbjct: 161 QGMQYLAEMSL-VHRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSXVKRSQGRIPVK 217
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCG---LYE--PKGEDCEE 256
W A E L D T ++DV++F V+L EI+ G P+ G L+ G E
Sbjct: 218 WMAIESLFDHIY----TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P D+C + M CW + P+ RP F I L+ M
Sbjct: 274 P---------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
G+ LH +G G +LKS N +V + D GL +RH + D+I
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 170
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
+R + + APE+L D+ ++AD+YA ++ E I RR GG
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 229
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
+ E + CE+ RPN+ SCE V+A MR+CW +R I+
Sbjct: 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289
Query: 296 ARLKHM 301
L +
Sbjct: 290 KTLSQL 295
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLL 202
QGM +L + H +L + N +V ++++DFGL R E DS + Q +
Sbjct: 161 QGMQYLAEMKL-VHRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSXVKRSQGRIPVK 217
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCG---LYE--PKGEDCEE 256
W A E L D T ++DV++F V+L EI+ G P+ G L+ G E
Sbjct: 218 WMAIESLFDHIY----TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P D+C + M CW + P+ RP F I L+ M
Sbjct: 274 P---------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
G+ LH +G G +LKS N +V + D GL +RH + D+I
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 209
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
+R + + APE+L D+ ++AD+YA ++ E I RR GG
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 268
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
+ E + CE+ RPN+ SCE V+A MR+CW +R I+
Sbjct: 269 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 328
Query: 296 ARLKHM 301
L +
Sbjct: 329 KTLSQL 334
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLL 202
QGM +L + H +L + N +V ++++DFGL R E DS + Q +
Sbjct: 161 QGMQYLAEMKL-VHRDLAARNILVAEGRKMKISDFGLS--RDVYEEDSYVKRSQGRIPVK 217
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCG---LYE--PKGEDCEE 256
W A E L D T ++DV++F V+L EI+ G P+ G L+ G E
Sbjct: 218 WMAIESLFDHIY----TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P D+C + M CW + P+ RP F I L+ M
Sbjct: 274 P---------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
G+ LH +G G +LKS N +V + D GL +RH + D+I
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 173
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
+R + + APE+L D+ ++AD+YA ++ E I RR GG
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 232
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
+ E + CE+ RPN+ SCE V+A MR+CW +R I+
Sbjct: 233 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 292
Query: 296 ARLKHM 301
L +
Sbjct: 293 KTLSQL 298
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 31/186 (16%)
Query: 145 GMTFLHRSPIGCHG-------NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY 197
G+ LH +G G +LKS N +V + D GL +RH + D+I
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPN 171
Query: 198 YR--SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGC--------- 244
+R + + APE+L D+ ++AD+YA ++ E I RR GG
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYY 230
Query: 245 -------GLYEPKGEDCEEPFRPNLELLRDSCEPF-VLA-CMRDCWAEAPESRPDFPTIR 295
+ E + CE+ RPN+ SCE V+A MR+CW +R I+
Sbjct: 231 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 290
Query: 296 ARLKHM 301
L +
Sbjct: 291 KTLSQL 296
>pdb|1AB8|A Chain A, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX
pdb|1AB8|B Chain B, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX
Length = 220
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTY 61
P+Y ++G+TVN ASRM+STG +I ++ L L GY RG++ +KGKG++ TY
Sbjct: 145 PQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKTY 203
Query: 62 WL 63
++
Sbjct: 204 FV 205
>pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1.
pdb|3UVJ|D Chain D, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1
Length = 220
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAAL----DKLGGYIVEERGVVCMKGKG 56
MPRY LFG+TVN SR E+TGE +I++S L + + +E RG V MKGK
Sbjct: 131 MPRYSLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKK 190
Query: 57 EVLTYWLV 64
E + W +
Sbjct: 191 EPMQVWFL 198
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+S+N +V + + ++ DFGL L +N+ + W
Sbjct: 117 GMAYIERMNY-IHRDLRSANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWT 173
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E++ + R P+ G E E E +R
Sbjct: 174 APE------AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL-EQVERGYR-- 224
Query: 262 LELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
+ +D C + M CW + PE RP F +++ L+
Sbjct: 225 MPCPQD-CPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 26/179 (14%)
Query: 141 IPRQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE------NDS 191
I RQ GM +L H +L + NC+V V+++ DFGL + A+ ND+
Sbjct: 179 IARQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDA 237
Query: 192 IGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG 251
I + W PE + R T ++DV+A+ V+L EI +G Y
Sbjct: 238 I-------PIRWMPPESIFYN----RYTTESDVWAYGVVLWEIFS----YGLQPYYGMAH 282
Query: 252 EDCEEPFRP-NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNI 309
E+ R N+ ++C + MR CW++ P RP F +I L+ M + + +
Sbjct: 283 EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTV 341
>pdb|1CUL|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
Length = 208
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTY 61
P+Y ++G+TVN ASRM+STG +I ++ L L GY RG++ +KGKG++ TY
Sbjct: 142 PQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKTY 200
Query: 62 WL 63
++
Sbjct: 201 FV 202
>pdb|1AZS|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
pdb|1CJK|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
pdb|1CJT|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJU|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJV|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
pdb|1CS4|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
pdb|1TL7|B Chain B, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With 2'(3')-O-(N-
Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
pdb|1U0H|B Chain B, Structural Basis For The Inhibition Of Mammalian Adenylyl
Cyclase By Mant-gtp
pdb|2GVD|B Chain B, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With Tnp-Atp And Mn
pdb|2GVZ|B Chain B, Crystal Structure Of Complex Of Gs- With The Catalytic
Domains Of Mammalian Adenylyl Cyclase: Complex With
Mant- Atp And Mn
pdb|3C14|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Ca
pdb|3C15|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Mg
pdb|3C16|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Adenosine-5'-Triphosphate And Ca
pdb|3G82|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
pdb|3MAA|B Chain B, Complex Of Gs-alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5-o-(l-thiophosphate) And Low Ca Concentration
Length = 212
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 PRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTY 61
P+Y ++G+TVN ASRM+STG +I ++ L L GY RG++ +KGKG++ TY
Sbjct: 146 PQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKTY 204
Query: 62 WL 63
++
Sbjct: 205 FV 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 129 IIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE 188
+++ L++F I +GM ++ R H +L+++N +V+ + ++ DFGL R +
Sbjct: 106 VLLPKLIDFSAQIA-EGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLA--RVIED 161
Query: 189 NDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLY 247
N+ + W APE + I K++V++F ++L+EI+ + P+ G
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINFGCFTI----KSNVWSFGILLYEIVTYGKIPYPG---- 213
Query: 248 EPKGEDCEEPFRPNLELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
D + R ++C + M+ CW E E RP F +++ L
Sbjct: 214 -RTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 264
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 136 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKXIHRDLAARNILLSEKNVVKICDFGLARD 193
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 194 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 248
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 249 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 302
Query: 303 DGKQKN 308
+ Q N
Sbjct: 303 NLLQAN 308
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 131 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 189 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 243
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 297
Query: 303 DGKQKN 308
+ Q N
Sbjct: 298 NLLQAN 303
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM FL S H +L + NC++ ++ ++V DFGL E DS+
Sbjct: 136 LIGFGLQVAK-GMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH 193
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 194 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 250 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 177 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 235 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 289
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 290 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 343
Query: 303 DGKQKN 308
+ Q N
Sbjct: 344 NLLQAN 349
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 190 LYKDFLTLEHLICYSFQVAK-GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD 247
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 248 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 302
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 303 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 356
Query: 303 DGKQKN 308
+ Q N
Sbjct: 357 NLLQAN 362
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 131 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 189 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 243
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 297
Query: 303 DGKQKN 308
+ Q N
Sbjct: 298 NLLQAN 303
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 183 LYKDFLTLEHLICYSFQVAK-GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD 240
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 241 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 295
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 296 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 349
Query: 303 DGKQKN 308
+ Q N
Sbjct: 350 NLLQAN 355
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 140 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 198 IY-KDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 252
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 306
Query: 303 DGKQKN 308
+ Q N
Sbjct: 307 NLLQAN 312
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 192 LYKDFLTLEHLICYSFQVAK-GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD 249
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 250 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 304
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 305 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 358
Query: 303 DGKQKN 308
+ Q N
Sbjct: 359 NLLQAN 364
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 185 LYKDFLTLEHLICYSFQVAK-GMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARD 242
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 243 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 297
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 298 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 351
Query: 303 DGKQKN 308
+ Q N
Sbjct: 352 NLLQAN 357
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 131 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGL--A 186
Query: 184 RHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPF 241
R ++ D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 187 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPY 242
Query: 242 GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHL 296
Query: 302 KDGKQKN 308
+ Q N
Sbjct: 297 GNLLQAN 303
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 131 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGL--A 186
Query: 184 RHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPF 241
R ++ D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 187 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPY 242
Query: 242 GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHL 296
Query: 302 KDGKQKN 308
+ Q N
Sbjct: 297 GNLLQAN 303
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 140 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 198 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 252
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 306
Query: 303 DGKQKN 308
+ Q N
Sbjct: 307 NLLQAN 312
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 14/186 (7%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 142 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
Query: 184 RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
+ + D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 200 IY-KDPDYVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPYP 254
Query: 243 GCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 255 GVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHLG 308
Query: 303 DGKQKN 308
+ Q N
Sbjct: 309 NLLQAN 314
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 27/192 (14%)
Query: 118 LKLRIGIHSDIIIITYLMNFGDGIPRQG-MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVT 176
L+L G + I ++ L G+ M+++HR +L + N +V S V +V+
Sbjct: 106 LRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR-------DLAARNILVNSNLVCKVS 158
Query: 177 DFGLHELRHCAENDSIGEHQYYRSL------LWKAPELLRDTHAPIRGTQKADVYAFAVI 230
DFGL R EN S + Y SL W APE + A + T +D +++ ++
Sbjct: 159 DFGLS--RFLEENSS--DPTYTSSLGGKIPIRWTAPEAI----AFRKFTSASDAWSYGIV 210
Query: 231 LHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD-SCEPFVLACMRDCWAEAPESRP 289
+ E++ FG ++ +D + L C + M DCW + +RP
Sbjct: 211 MWEVMS----FGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 266
Query: 290 DFPTIRARLKHM 301
FP + + L M
Sbjct: 267 RFPQVVSALDKM 278
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
GM +L+ H +L + NC+V + +++ DFG+ R E D + + LL
Sbjct: 139 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--TRDIXETDX--XRKGGKGLLPV 193
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKGEDCE 255
W APE L+D T +D+++F V+L EI P+ G + G +
Sbjct: 194 RWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD 249
Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
+P D+C V MR CW P+ RP F I LK
Sbjct: 250 QP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 140 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGL--A 195
Query: 184 RHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPF 241
R ++ D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPY 251
Query: 242 GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHL 305
Query: 302 KDGKQKN 308
+ Q N
Sbjct: 306 GNLLQAN 312
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L H NL + N ++ +R +++DFGL + ++ L W
Sbjct: 448 GMKYLEEKNF-VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR--------RGPFGGCGLYEPKGEDCEE 256
APE + + + ++DV+++ V + E + +GP + + K +C
Sbjct: 507 APECINFR----KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 562
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
C P + A M DCW E RPDF T+ R++
Sbjct: 563 -----------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
GM +L+ H +L + NC+V + +++ DFG+ R E D + + LL
Sbjct: 142 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--TRDIXETDX--XRKGGKGLLPV 196
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKGEDCE 255
W APE L+D T +D+++F V+L EI P+ G + G +
Sbjct: 197 RWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
+P D+C V MR CW P+ RP F I LK
Sbjct: 253 QP---------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL 183
++ D + + +L+ + + + GM FL S H +L + N +++ + V+++ DFGL
Sbjct: 140 LYKDFLTLEHLICYSFQVAK-GMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGL--A 195
Query: 184 RHCAEN-DSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPF 241
R ++ D + + L W APE + D I ++DV++F V+L EI P+
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI----QSDVWSFGVLLWEIFSLGASPY 251
Query: 242 GGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
G + E +E R D P + M DCW P RP F + ++H+
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSEL---VEHL 305
Query: 302 KDGKQKN 308
+ Q N
Sbjct: 306 GNLLQAN 312
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 27/164 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
GM +L+ H +L + NC+V + +++ DFG+ R E D + + LL
Sbjct: 142 GMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM--TRDIXETDX--XRKGGKGLLPV 196
Query: 203 -WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG-RRGPFGGCG-----LYEPKGEDCE 255
W APE L+D T +D+++F V+L EI P+ G + G +
Sbjct: 197 RWMAPESLKDGVF----TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
+P D+C V MR CW P RP F I LK
Sbjct: 253 QP---------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
FLHR +L + NC+V + V++V+DFGL R+ +++ + W PE
Sbjct: 126 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSRGSKFPVRWSPPE 176
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
+L + + + K+D++AF V++ EI G + E L L R
Sbjct: 177 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 228
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
V M CW E + RP F + + + + D
Sbjct: 229 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
FLHR +L + NC+V + V++V+DFGL R+ +++ + W PE
Sbjct: 141 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEETSSVGSKFPVRWSPPE 191
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
+L + + + K+D++AF V++ EI G + E L L R
Sbjct: 192 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 243
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
V M CW E + RP F + + + + D
Sbjct: 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 567
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 620
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 621 LYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTXXKASKGKLPIKWMAPESINFR---- 187
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 240
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L H +L + N ++ +R +++DFGL + ++ L W
Sbjct: 122 GMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR--------RGPFGGCGLYEPKGEDCEE 256
APE + + + ++DV+++ V + E + +GP + + K +C
Sbjct: 181 APECINFR----KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 236
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
C P + A M DCW E RPDF T+ R++
Sbjct: 237 -----------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 20/171 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHEL-----------RHCAENDSI 192
GM +LH I H +L S NC+V + V DFGL L R + D
Sbjct: 119 SGMAYLHSMNI-IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 193 GEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE 252
+ + W APE++ +K DV++F ++L EIIGR Y P+
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSY----DEKVDVFSFGIVLCEIIGR---VNADPDYLPRTM 230
Query: 253 DCEEPFRPNLE-LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
D R L+ +C P C PE RP F + L+ ++
Sbjct: 231 DFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
FLHR +L + NC+V + V++V+DFGL R+ +++ + W PE
Sbjct: 141 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 191
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
+L + + + K+D++AF V++ EI G + E L L R
Sbjct: 192 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 243
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
V M CW E + RP F + + + + D
Sbjct: 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 215
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 268
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 269 LYSLMTKCWAYDPSRRPRFTELKAQL 294
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 134 LIGFGLQVAK-GMKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVH 191
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 192 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 248 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
FLHR +L + NC+V + V++V+DFGL R+ +++ + W PE
Sbjct: 126 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 176
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
+L + + + K+D++AF V++ EI G + E L L R
Sbjct: 177 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 228
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
V M CW E + RP F + + + + D
Sbjct: 229 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 192
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 245
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 246 LYSLMTKCWAYDPSRRPRFTELKAQL 271
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 240
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 240
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
FLHR +L + NC+V + V++V+DFGL R+ +++ + W PE
Sbjct: 132 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 182
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
+L + + + K+D++AF V++ EI G + E L L R
Sbjct: 183 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 234
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
V M CW E + RP F + + + + D
Sbjct: 235 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 184
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 237
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTELKAQL 263
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
FLHR +L + NC+V + V++V+DFGL R+ +++ + W PE
Sbjct: 121 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 171
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
+L + + + K+D++AF V++ EI G + E L L R
Sbjct: 172 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 223
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
V M CW E + RP F + + + + D
Sbjct: 224 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 190
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 243
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 244 LYSLMTKCWAYDPSRRPRFTELKAQL 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V+S +++ DFGL R+ ++ + + W APE +
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 189
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 242
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 243 LYSLMTKCWAYDPSRRPRFTELKAQL 268
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
FLHR +L + NC+V + V++V+DFGL R+ +++ + W PE
Sbjct: 125 FLHR-------DLAARNCLVNDQGVVKVSDFGLS--RYVLDDEYTSSVGSKFPVRWSPPE 175
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD 267
+L + + + K+D++AF V++ EI G + E L L R
Sbjct: 176 VLMYS----KFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQGLRLYRP 227
Query: 268 S-CEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
V M CW E + RP F + + + + D
Sbjct: 228 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H +L + N +V S +++ DFGL +L ++ + + W APE L D
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF-- 191
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR---------- 266
++++DV++F V+L+E+ C++ P+ E LR
Sbjct: 192 --SRQSDVWSFGVVLYELFTY----------------CDKSCSPSAEFLRMMGCERDVPA 233
Query: 267 -----------------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
+C V M+ CWA +P+ RP F + +L + G +
Sbjct: 234 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 290
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 45/177 (25%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F I +GM F+ + H +L+++N +V++ V ++ DFGL +G
Sbjct: 280 LIDFSAQIA-EGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLAR---------VG 328
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGC-------- 244
+ W APE + I K+DV++F ++L EI+ R P+ G
Sbjct: 329 AK---FPIKWTAPEAINFGSFTI----KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 381
Query: 245 ---GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
G P+ E+C E + M CW PE RP F I++ L
Sbjct: 382 LERGYRMPRPENCPEE---------------LYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L S H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 135 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 193 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 249 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 118 LKLRIGIHSDIIIITYLMNFGDGIPRQG-MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVT 176
L+L G + I ++ L G+ M+++HR +L + N +V S V +V+
Sbjct: 108 LRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR-------DLAARNILVNSNLVCKVS 160
Query: 177 DFGLHEL-----RHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVIL 231
DFGL E S+G R W APE + A + T +D +++ +++
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIR---WTAPEAI----AFRKFTSASDAWSYGIVM 213
Query: 232 HEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD-SCEPFVLACMRDCWAEAPESRPD 290
E++ FG ++ +D + L C + M DCW + +RP
Sbjct: 214 WEVMS----FGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPR 269
Query: 291 FPTIRARLKHM 301
FP + + L M
Sbjct: 270 FPQVVSALDKM 280
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
+GM +L S H +L + N ++ +R ++++ DFGL +R +ND Q +R +
Sbjct: 122 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHXVMQEHRKVPF 178
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
W APE L+ + +D + F V L E+ G+ G G + ++ E
Sbjct: 179 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
RP + C + M CWA PE RP F +R
Sbjct: 235 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 266
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
+GM +L S H +L + N ++ +R ++++ DFGL +R +ND Q +R +
Sbjct: 132 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHXVMQEHRKVPF 188
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
W APE L+ + +D + F V L E+ G+ G G + ++ E
Sbjct: 189 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
RP + C + M CWA PE RP F +R
Sbjct: 245 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 276
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L S H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 135 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 193 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 249 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L S H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 154 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 211
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 212 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 267
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 268 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 310
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L S H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 134 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 191
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 192 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 248 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L S H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 132 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 189
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 190 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 246 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 288
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 153 LIGFGLQVAK-GMKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 210
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 211 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 266
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 267 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 309
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 116 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWT 172
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 173 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 211
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 212 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L S H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 130 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 187
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 188 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 244 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 286
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 123 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 179
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 180 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 218
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 219 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V++ +++ DFGL R+ ++ + + W APE +
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 567
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 620
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 621 LYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
+GM +L S H +L + N ++ +R ++++ DFGL +R +ND Q +R +
Sbjct: 126 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 182
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
W APE L+ + +D + F V L E+ G+ G G + ++ E
Sbjct: 183 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMM 317
RP + C + M CWA PE RP F +R L + + + D E
Sbjct: 239 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQD--FEEP 290
Query: 318 EKQKNIIDQMMEMMEKYANN 337
+K ++ ++ ++E A N
Sbjct: 291 DKLHIQMNDVITVIEGRAEN 310
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 127 LIGFGLQVAK-GMKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 184
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 185 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 240
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 241 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 283
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--L 201
+GM +L S H +L + N ++ +R ++++ DFGL +R +ND Q +R
Sbjct: 122 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 178
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
W APE L+ + +D + F V L E+ G+ G G + ++ E
Sbjct: 179 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
RP + C + M CWA PE RP F +R
Sbjct: 235 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 266
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
+GM +L S H +L + N ++ +R ++++ DFGL +R +ND Q +R +
Sbjct: 126 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 182
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
W APE L+ + +D + F V L E+ G+ G G + ++ E
Sbjct: 183 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 238
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
RP + C + M CWA PE RP F +R
Sbjct: 239 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 270
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L+ FG + + GM +L S H +L + NC++ ++ ++V DFGL + E S+
Sbjct: 133 LIGFGLQVAK-GMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 190
Query: 194 EHQYYR-SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGP------FGGCGL 246
+ + W A E L+ + T K+DV++F V+L E++ R P +
Sbjct: 191 NKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
Query: 247 YEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
Y +G +P + C + M CW E RP F + +R+
Sbjct: 247 YLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 119 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 175
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 176 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 214
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 215 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 292 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 348
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 349 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 387
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 388 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 292 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 348
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 349 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 387
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 388 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
+GM +L S H +L + N ++ +R ++++ DFGL +R +ND Q +R +
Sbjct: 122 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 178
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
W APE L+ + +D + F V L E+ G+ G G + ++ E
Sbjct: 179 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
RP + C + M CWA PE RP F +R
Sbjct: 235 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 266
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 292 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 348
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 349 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 387
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 388 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL-- 201
+GM +L S H +L + N ++ +R ++++ DFGL +R +ND Q +R +
Sbjct: 132 EGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL--MRALPQNDDHYVMQEHRKVPF 188
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG--GCGLYEPKGEDCEEP 257
W APE L+ + +D + F V L E+ G+ G G + ++ E
Sbjct: 189 AWCAPESLKTRTF----SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
RP + C + M CWA PE RP F +R
Sbjct: 245 PRP------EDCPQDIYNVMVQCWAHKPEDRPTFVALR 276
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 123 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWT 179
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 180 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 218
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 219 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 117 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 173
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 174 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 212
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 213 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 375 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 431
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ P N
Sbjct: 432 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPY---------------PGMVN 470
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 471 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 115 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 171
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 172 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 210
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 211 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++ + N +V++ +++ DFGL R+ ++ + + W APE +
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLS--RYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 217 RGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKG--EDCEE-PFRPNLELLRDSCEPF 272
R T +DV+ F V + EI+ PF G + G E+ E P PN C P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-------CPPT 240
Query: 273 VLACMRDCWAEAPESRPDFPTIRARL 298
+ + M CWA P RP F ++A+L
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H +L + N +V S +++ DFGL +L ++ + + W APE L D
Sbjct: 150 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-- 207
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR---------- 266
++++DV++F V+L+E+ C++ P+ E LR
Sbjct: 208 --SRQSDVWSFGVVLYELFTY----------------CDKSCSPSAEFLRMMGCERDVPA 249
Query: 267 -----------------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
+C V M+ CWA +P+ RP F + +L + G +
Sbjct: 250 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 293 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWT 349
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ P N
Sbjct: 350 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPY---------------PGMVN 388
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 389 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L+++N +V V +V DFGL L +N+ + W
Sbjct: 126 GMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H +L + N +V S +++ DFGL +L ++ + + W APE L D
Sbjct: 137 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-- 194
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR---------- 266
++++DV++F V+L+E+ C++ P+ E LR
Sbjct: 195 --SRQSDVWSFGVVLYELFTY----------------CDKSCSPSAEFLRMMGSERDVPA 236
Query: 267 -----------------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
+C V M+ CWA +P+ RP F + +L + G +
Sbjct: 237 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 293
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H +L + N +V S +++ DFGL +L ++ + + W APE L D
Sbjct: 138 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-- 195
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR---------- 266
++++DV++F V+L+E+ C++ P+ E LR
Sbjct: 196 --SRQSDVWSFGVVLYELFTY----------------CDKSCSPSAEFLRMMGCERDVPA 237
Query: 267 -----------------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
+C V M+ CWA +P+ RP F + +L + G +
Sbjct: 238 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 294
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 120 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 177
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 178 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 231
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V MR CW +SRP F +
Sbjct: 232 GIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELIIE 282
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 283 FSKMARDPQRYLVIQGDERM 302
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 113 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 171 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 223
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V MR CW +SRP F +
Sbjct: 224 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELII 274
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 275 EFSKMARDPQRYLVIQGDERM 295
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 25/187 (13%)
Query: 121 RIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
R+ D+ ++T+ L+ F + + GM FL H +L + N +VT V+++ DF
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAK-GMEFLEFKSC-VHRDLAARNVLVTHGKVVKICDF 216
Query: 179 GLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR- 237
GL ++++ + + W APE L + I K+DV+++ ++L EI
Sbjct: 217 GLAR-DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI----KSDVWSYGILLWEIFSLG 271
Query: 238 RGPFGG----CGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
P+ G Y+ G ++PF E + M+ CWA RP F
Sbjct: 272 VNPYPGIPVDANFYKLIQNGFKMDQPFYATEE---------IYIIMQSCWAFDSRKRPSF 322
Query: 292 PTIRARL 298
P + + L
Sbjct: 323 PNLTSFL 329
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 123 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 182 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 236
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 237 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 38/169 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM ++ R H +L ++N +V V +V DFGL L +N+ + W
Sbjct: 126 GMAYVERMNY-VHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWT 182
Query: 205 APELLRDTHAPIRG--TQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
APE A + G T K+DV++F ++L E+ + R P+ G N
Sbjct: 183 APE------AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM---------------VN 221
Query: 262 LELL-------RDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLK 299
E+L R C P + D CW + PE RP F ++A L+
Sbjct: 222 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 145 GMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
GM +L S +G H +L + N ++ S V +V+DFGL + + + W
Sbjct: 136 GMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPFR 259
APE + A + T +DV+++ +++ E++ +G +E +D EE +R
Sbjct: 194 TAPEAI----AFRKFTSASDVWSYGIVMWEVVS----YGERPYWEMTNQDVIKAVEEGYR 245
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
+ C + M DCW + SRP F I
Sbjct: 246 LPSPM---DCPAALYQLMLDCWQKERNSRPKFDEI 277
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V MR CW +SRP F +
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQ 312
M Q+ ++ Q
Sbjct: 273 FSKMARDPQRYLVIQ 287
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 129 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 188 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 242
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 243 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 117 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 176 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 230
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 231 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 264
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 139 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 198 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 252
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 253 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 286
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 139 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 198 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 252
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 253 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 286
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 35/170 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L H +L + NC++ + V DFGL + I YYR
Sbjct: 149 GMEYLSSRNF-IHRDLAARNCMLAEDMTVCVADFGL--------SRKIYSGDYYRQGCAS 199
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGL-----YEPKG 251
+ W A E L D T +DV+AF V + EI+ R + P+ G Y G
Sbjct: 200 KLPVKWLALESLADNLY----TVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
++P C V M CW+ P+ RP F +R L+++
Sbjct: 256 NRLKQP---------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 123 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 182 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 236
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 237 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 270
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 119 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 178 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 232
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 233 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 266
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 137 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 196 APECIN----YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 250
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 251 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 284
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 22/194 (11%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I L+N+ I + GM +L + H +L + N +V S +++TDFGL L
Sbjct: 133 HKDNIGSQLLLNWCVQIAK-GMMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARLL 190
Query: 185 HCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG 243
E + + + W A E + + T ++DV+++ V + E++ G P+ G
Sbjct: 191 EGDEKEYNADGGKM-PIKWMALECIHYR----KFTHQSDVWSYGVTIWELMTFGGKPYDG 245
Query: 244 CGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
E KGE +P C V M CW +SRP F + A
Sbjct: 246 IPTREIPDLLEKGERLPQP---------PICTIDVYMVMVKCWMIDADSRPKFKELAAEF 296
Query: 299 KHMKDGKQKNIIDQ 312
M Q+ ++ Q
Sbjct: 297 SRMARDPQRYLVIQ 310
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 35/170 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS---- 200
GM +L H +L + NC++ + V DFGL + I YYR
Sbjct: 159 GMEYLSNRNF-LHRDLAARNCMLRDDMTVCVADFGL--------SKKIYSGDYYRQGRIA 209
Query: 201 ---LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEP-----KG 251
+ W A E L D T K+DV+AF V + EI R P+ G +E G
Sbjct: 210 KMPVKWIAIESLADRVY----TSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
++P + C + M CW P RP F +R +L+ +
Sbjct: 266 HRLKQP---------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 22/194 (11%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I L+N+ I + GM +L + H +L + N +V S +++TDFGL L
Sbjct: 110 HKDNIGSQLLLNWCVQIAK-GMMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG 243
E + + + W A E + + T ++DV+++ V + E++ G P+ G
Sbjct: 168 EGDEKEYNADGGKM-PIKWMALECIHYR----KFTHQSDVWSYGVTIWELMTFGGKPYDG 222
Query: 244 CGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
E KGE +P C V M CW +SRP F + A
Sbjct: 223 IPTREIPDLLEKGERLPQP---------PICTIDVYMVMVKCWMIDADSRPKFKELAAEF 273
Query: 299 KHMKDGKQKNIIDQ 312
M Q+ ++ Q
Sbjct: 274 SRMARDPQRYLVIQ 287
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 482 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 541 APECINY----YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 595
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 596 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 629
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 144 QGMTFLH--RSPIGCHGNLKSSNCV-VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS 200
QG+ +LH + H +LK N + V VL++ DFG ++ G S
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG------S 167
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---DCEEP 257
W APE+ ++ ++K DV+++ +IL E+I RR PF G P
Sbjct: 168 AAWMAPEVFEGSNY----SEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWAVHNG 221
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
RP L+++ +P + + M CW++ P RP I + H+
Sbjct: 222 TRP--PLIKNLPKP-IESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + N ++ ++ +++DFGL + EN + + W
Sbjct: 481 GMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 539
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE-----PKGEDCEEPF 258
APE + + + K+DV++F V++ E + P+ G E KGE P
Sbjct: 540 APECINY----YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP- 594
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
C + M CW E+RP F + RL++
Sbjct: 595 --------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 203 WKAPELLR----DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF 258
W APE L+ DT+ + AD+++FAV+L E++ R PF E + E
Sbjct: 174 WVAPEALQKKPEDTN-----RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL 228
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
RP + P V M+ C E P RP F I L+ M+D
Sbjct: 229 RPTIP---PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 144 QGMTFLH--RSPIGCHGNLKSSNCV-VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS 200
QG+ +LH + H +LK N + V VL++ DFG ++ G S
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG------S 166
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---DCEEP 257
W APE+ ++ ++K DV+++ +IL E+I RR PF G P
Sbjct: 167 AAWMAPEVFEGSNY----SEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWAVHNG 220
Query: 258 FRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
RP L+++ +P + + M CW++ P RP I + H+
Sbjct: 221 TRP--PLIKNLPKP-IESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFG +L
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V MR CW +SRP F +
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFG +L
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V MR CW +SRP F +
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 156 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 214 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 265
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 266 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 144 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 201
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 202 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 255
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 256 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 306
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 307 FSKMARDPQRYLVIQGDERM 326
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 129 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 187 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 238
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 239 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 129 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 187 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 238
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 239 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 146 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 204 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 255
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 256 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 111 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 168
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 169 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 222
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 223 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 273
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 274 FSKMARDPQRYLVIQGDERM 293
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 117 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 175 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 227
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 228 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 278
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 279 EFSKMARDPQRYLVIQGDERM 299
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 117 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 175 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 227
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 228 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 278
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 279 EFSKMARDPQRYLVIQGDERM 299
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 117 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 175 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 227
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 228 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 278
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 279 EFSKMARDPQRYLVIQGDERM 299
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 113 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 171 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 223
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 224 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 274
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 275 EFSKMARDPQRYLVIQGDERM 295
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 114 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 171
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 172 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 225
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 226 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 276
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 277 FSKMARDPQRYLVIQGDERM 296
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 116 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 173
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 174 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 226
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 227 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 277
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 278 EFSKMARDPQRYLVIQGDERM 298
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 113 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 171 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 223
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 224 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 274
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 275 EFSKMARDPQRYLVIQGDERM 295
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 135 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 192
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 193 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 245
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 246 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 296
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 297 EFSKMARDPQRYLVIQGDERM 317
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 111 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 168
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 169 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 222
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 223 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 273
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 274 FSKMARDPQRYLVIQGDERM 293
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
+ M +L I C H ++ N +V S +++ DFGL R+ + D +
Sbjct: 136 KAMAYLES--INCVHRDIAVRNILVASPECVKLGDFGLS--RYIEDEDYYKASVTRLPIK 191
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
W +PE + R T +DV+ FAV + EI+ FG + + +D
Sbjct: 192 WMSPESINFR----RFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD 243
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
L + D C P + M CW P RP F + L
Sbjct: 244 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
+ M +L I C H ++ N +V S +++ DFGL R+ + D +
Sbjct: 124 KAMAYLES--INCVHRDIAVRNILVASPECVKLGDFGLS--RYIEDEDYYKASVTRLPIK 179
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
W +PE + R T +DV+ FAV + EI+ FG + + +D
Sbjct: 180 WMSPESINFR----RFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD 231
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
L + D C P + M CW P RP F + L
Sbjct: 232 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 113 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 171 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 223
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 224 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 274
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 275 EFSKMARDPQRYLVIQGDERM 295
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 104 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 161
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 162 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 215
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 216 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 266
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 267 FSKMARDPQRYLVIQGDERM 286
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 14/157 (8%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
+ M +L I C H ++ N +V S +++ DFGL R+ + D +
Sbjct: 120 KAMAYLES--INCVHRDIAVRNILVASPECVKLGDFGLS--RYIEDEDYYKASVTRLPIK 175
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
W +PE + R T +DV+ FAV + EI+ FG + + +D
Sbjct: 176 WMSPESINFR----RFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD 227
Query: 263 ELLR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
L + D C P + M CW P RP F + L
Sbjct: 228 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 144 QGMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
GM +L S +G H +L + N ++ S V +V+DFGL + + +
Sbjct: 158 SGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPF 258
W +PE + A + T +DV+++ ++L E++ +G +E +D +E +
Sbjct: 216 WTSPEAI----AYRKFTSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKAVDEGY 267
Query: 259 R--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R P ++ C + M DCW + +RP F I + L +
Sbjct: 268 RLPPPMD-----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I +GM +L + H +L + N +V + +++TDFGL +L
Sbjct: 107 HKDNIGSQYLLNWCVQIA-EGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLL 164
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 165 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 218
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 219 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 269
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 270 FSKMARDPQRYLVIQGDERM 289
>pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1.
pdb|3UVJ|C Chain C, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1
Length = 225
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEER 47
MPRYCLFG+ V A++ ES P +I++SP L G++ R
Sbjct: 126 MPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGFVFTPR 172
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 374 RGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
+G V+ + + VT+ FSDIVGFTA+ ++ +PL+
Sbjct: 3 QGQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQ 36
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 79 VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
V+G K D+HA +IA M+L +++ H E +K+RIG+HS
Sbjct: 69 VAGGLHKESDTHAVQIALMALKMMELSDEVMSPHG--EPIKMRIGLHS 114
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRD 211
P H +LKS N +V + D GL + + N +G + + + APE+L +
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 212 THAP--IRGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKGED-----C 254
T ++ D++AF ++L E+ R + PF +P ED C
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 251
Query: 255 EEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESR 288
+ RPN+ D + M++CW + P +R
Sbjct: 252 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRD 211
P H +LKS N +V + D GL + + N +G + + + APE+L +
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 212 THAP--IRGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKGED-----C 254
T ++ D++AF ++L E+ R + PF +P ED C
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 251
Query: 255 EEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESR 288
+ RPN+ D + M++CW + P +R
Sbjct: 252 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND-SIGEHQYYRSLLWKAPELLRD 211
P H +LKS N +V + D GL + + N +G + + + APE+L +
Sbjct: 161 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 220
Query: 212 THAP--IRGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKGED-----C 254
T ++ D++AF ++L E+ R + PF +P ED C
Sbjct: 221 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 280
Query: 255 EEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESR 288
+ RPN+ D + M++CW + P +R
Sbjct: 281 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + NC+V ++++ DFG+ + + +G H + W
Sbjct: 140 GMVYL-ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRWM 197
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLEL 264
PE + + T ++DV++ V+L EI +G Y+ + E L
Sbjct: 198 PPESIMYR----KFTTESDVWSLGVVLWEIF----TYGKQPWYQLSNNEVIECITQGRVL 249
Query: 265 LR-DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
R +C V M CW P R + I L+++
Sbjct: 250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 32/214 (14%)
Query: 110 IAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTS 169
+ + P +L+ + H + I L+ + I + GM +L H NL + N +V +
Sbjct: 93 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK-GMEYLGTKRY-IHRNLATRNILVEN 150
Query: 170 RWVLQVTDFGLHELRHCAENDSIGEHQYYR-------SLLWKAPELLRDTHAPIRGTQKA 222
+++ DFGL ++ + +YY+ + W APE L ++ + +
Sbjct: 151 ENRVKIGDFGLTKVLP-------QDKEYYKVKEPGESPIFWYAPESLTESKFSV----AS 199
Query: 223 DVYAFAVILHEIIG--RRGPFGGCGLYEPKGEDCE---------EPFRPNLELLR-DSCE 270
DV++F V+L+E+ + G D + E + N L R D C
Sbjct: 200 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 259
Query: 271 PFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG 304
+ M +CW RP F + R+ ++D
Sbjct: 260 DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 293
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 11/151 (7%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L S H +L + NC+V + ++++ DFG+ + + +G H + W
Sbjct: 145 GMVYL-ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRWM 202
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLEL 264
PE + + T ++DV++F VIL EI +G ++ + E L
Sbjct: 203 PPESIMYR----KFTTESDVWSFGVILWEIF----TYGKQPWFQLSNTEVIECITQGRVL 254
Query: 265 LRDS-CEPFVLACMRDCWAEAPESRPDFPTI 294
R C V M CW P+ R + I
Sbjct: 255 ERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-----LLWKAPELLR 210
H +L + N +V S V +V+DFGL + E+D E Y S + W APE +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRV---LEDDP--EATYTTSGGKIPIRWTAPEAIS 223
Query: 211 DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD-SC 269
+ T +DV++F +++ E++ +G +E + + L C
Sbjct: 224 YR----KFTSASDVWSFGIVMWEVM----TYGERPYWELSNHEVMKAINDGFRLPTPMDC 275
Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ M CW + RP F I + L +
Sbjct: 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 19/153 (12%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL------LWKAPELL 209
H +L + N +V S V +V+DFGL D + Y +L W APE +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLE----DDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 210 RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRD-S 268
+ + T +DV+++ +++ E++ +G ++ +D + L
Sbjct: 213 QYR----KFTSASDVWSYGIVMWEVMS----YGERPYWDMTNQDVINAIEQDYRLPPPMD 264
Query: 269 CEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
C + M DCW + RP F I L M
Sbjct: 265 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 36/168 (21%)
Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL---- 201
M ++HR+ L + N +V S V +V+DFGL D + Y +L
Sbjct: 128 MNYVHRA-------LAARNILVNSNLVCKVSDFGLSRFLE----DDTSDPTYTSALGGKI 176
Query: 202 --LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----E 255
W APE ++ + T +DV+++ +++ E++ +G ++ +D E
Sbjct: 177 PIRWTAPEAIQYR----KFTSASDVWSYGIVMWEVMS----YGERPYWDMTNQDVINAIE 228
Query: 256 EPFR--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ +R P ++ C + M DCW + RP F I L M
Sbjct: 229 QDYRLPPPMD-----CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 123 GIHSDIIIITYLMNFGDGIPR-QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH 181
G + I ++ L G G+ M+++HR +L + N +V S V +V+DFG+
Sbjct: 111 GRFTVIQLVGMLRGIGSGMKYLSDMSYVHR-------DLAARNILVNSNLVCKVSDFGMS 163
Query: 182 ELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ + + W APE + A + T +DV+++ +++ E++ +
Sbjct: 164 RVLEDDPEAAYTTRGGKIPIRWTAPEAI----AYRKFTSASDVWSYGIVMWEVMS----Y 215
Query: 242 GGCGLYEPKGEDC----EEPFR--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
G ++ +D EE +R P ++ C + M DCW + RP F I
Sbjct: 216 GERPYWDMSNQDVIKAIEEGYRLPPPMD-----CPIALHQLMLDCWQKERSDRPKFGQI 269
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 123 GIHSDIIIITYLMNFGDGIPR-QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH 181
G + I ++ L G G+ M+++HR +L + N +V S V +V+DFG+
Sbjct: 105 GRFTVIQLVGMLRGIGSGMKYLSDMSYVHR-------DLAARNILVNSNLVCKVSDFGMS 157
Query: 182 ELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ + + W APE + A + T +DV+++ +++ E++ +
Sbjct: 158 RVLEDDPEAAYTTRGGKIPIRWTAPEAI----AYRKFTSASDVWSYGIVMWEVMS----Y 209
Query: 242 GGCGLYEPKGEDC----EEPFR--PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
G ++ +D EE +R P ++ C + M DCW + RP F I
Sbjct: 210 GERPYWDMSNQDVIKAIEEGYRLPPPMD-----CPIALHQLMLDCWQKERSDRPKFGQI 263
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 39/208 (18%)
Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
+LLD V+ H+ A PQ L+N+G I + GM +L + H N
Sbjct: 100 SLLDHVRQHRGALGPQ-----------------LLLNWGVQIAK-GMYYLEEHGM-VHRN 140
Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGT 219
L + N ++ S +QV DFG+ +L ++ + + + W A E + + T
Sbjct: 141 LAARNVLLKSPSQVQVADFGVADLL-PPDDKQLLYSEAKTPIKWMALESIHFG----KYT 195
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV+++ V + E++ P+ G L E KGE +P C V
Sbjct: 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP---------QICTIDV 246
Query: 274 LACMRDCWAEAPESRPDFPTIRARLKHM 301
M CW RP F + M
Sbjct: 247 YMVMVKCWMIDENIRPTFKELANEFTRM 274
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFG +L
Sbjct: 117 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 174
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 175 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 227
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 228 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 278
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 279 EFSKMARDPQRYLVIQGDERM 299
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 24/191 (12%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSR 170
+H P+E L R L++F + QGM FL S H ++ + N ++T+
Sbjct: 156 SHNPEEQLSSRD-----------LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNG 202
Query: 171 WVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVI 230
V ++ DFGL +++ I + + W APE + D T ++DV+++ ++
Sbjct: 203 HVAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAPESIFDCVY----TVQSDVWSYGIL 257
Query: 231 LHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESR 288
L EI P+ G + + + ++ + + P + + M+ CWA P R
Sbjct: 258 LWEIFSLGLNPYPGILV----NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 313
Query: 289 PDFPTIRARLK 299
P F I + L+
Sbjct: 314 PTFQQICSFLQ 324
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 50/184 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE-HQYYR--- 199
+GM +LH S H NL + N ++ + ++++ DFGL + ++ E H+YYR
Sbjct: 128 EGMAYLH-SQHYIHRNLAARNVLLDNDRLVKIGDFGLAK--------AVPEGHEYYRVRE 178
Query: 200 ----SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR------------------ 237
+ W APE L++ + +DV++F V L+E++
Sbjct: 179 DGDSPVFWYAPECLKE----YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
Query: 238 RGPFGGCGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
+G L E +GE P D C V M++CW RP F +
Sbjct: 235 QGQMTVLRLTELLERGERLPRP---------DKCPCEVYHLMKNCWETEASFRPTFENLI 285
Query: 296 ARLK 299
LK
Sbjct: 286 PILK 289
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
G+ FLH + H ++KS+N ++ + +++DFGL ++ + + +
Sbjct: 144 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-TVMXSRIVGTTAY 201
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
APE LR P K+D+Y+F V+L EII
Sbjct: 202 MAPEALRGEITP-----KSDIYSFGVVLLEII 228
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW- 203
G+ ++HR+ I H ++K++N ++T VL++ DFGL A+N + LW
Sbjct: 137 GLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 204 KAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGR 237
+ PELL RD PI D++ I+ E+ R
Sbjct: 196 RPPELLLGERDYGPPI------DLWGAGCIMAEMWTR 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 39/208 (18%)
Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
+LLD V+ H+ A PQ L+N+G I + GM +L + H N
Sbjct: 118 SLLDHVRQHRGALGPQ-----------------LLLNWGVQIAK-GMYYLEEHGM-VHRN 158
Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGT 219
L + N ++ S +QV DFG+ +L ++ + + + W A E + + T
Sbjct: 159 LAARNVLLKSPSQVQVADFGVADLL-PPDDKQLLYSEAKTPIKWMALESIHFG----KYT 213
Query: 220 QKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFV 273
++DV+++ V + E++ P+ G L E KGE +P C V
Sbjct: 214 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP---------QICTIDV 264
Query: 274 LACMRDCWAEAPESRPDFPTIRARLKHM 301
M CW RP F + M
Sbjct: 265 YMVMVKCWMIDENIRPTFKELANEFTRM 292
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
G+ FLH + H ++KS+N ++ + +++DFGL ++ + + +
Sbjct: 144 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-TVMXXRIVGTTAY 201
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
APE LR P K+D+Y+F V+L EII
Sbjct: 202 MAPEALRGEITP-----KSDIYSFGVVLLEII 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFG +L
Sbjct: 114 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 171
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 172 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 225
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 226 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 276
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 277 FSKMARDPQRYLVIQGDERM 296
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFG +L
Sbjct: 112 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPF 241
E + E + W A E +L + T ++DV+++ V + E++ G + P+
Sbjct: 170 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSK-PY 222
Query: 242 GGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRA 296
G E KGE +P C V M CW +SRP F +
Sbjct: 223 DGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELII 273
Query: 297 RLKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 274 EFSKMARDPQRYLVIQGDERM 294
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
G+ ++HR+ I H ++K++N ++T VL++ DFGL A+N + LW
Sbjct: 136 NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 204 -KAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGR 237
+ PELL RD PI D++ I+ E+ R
Sbjct: 195 YRPPELLLGERDYGPPI------DLWGAGCIMAEMWTR 226
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
G+ FLH + H ++KS+N ++ + +++DFGL + + + +
Sbjct: 135 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-XVXXSRIVGTTAY 192
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
APE LR P K+D+Y+F V+L EII
Sbjct: 193 XAPEALRGEITP-----KSDIYSFGVVLLEII 219
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
G+ ++HR+ I H ++K++N ++T VL++ DFGL A+N + LW
Sbjct: 136 NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 204 -KAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGR 237
+ PELL RD PI D++ I+ E+ R
Sbjct: 195 YRPPELLLGERDYGPPI------DLWGAGCIMAEMWTR 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELR 184
H D I YL+N+ I + GM +L + H +L + N +V + +++TDFG +L
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLL 167
Query: 185 HCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFG 242
E + E + W A E +L + T ++DV+++ V + E++ P+
Sbjct: 168 GAEEKEYHAEGGKV-PIKWMALESILHRIY-----THQSDVWSYGVTVWELMTFGSKPYD 221
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
G E KGE +P C V M CW +SRP F +
Sbjct: 222 GIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDADSRPKFRELIIE 272
Query: 298 LKHMKDGKQKNIIDQMMEMM 317
M Q+ ++ Q E M
Sbjct: 273 FSKMARDPQRYLVIQGDERM 292
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
G+ ++HR+ I H ++K++N ++T VL++ DFGL A+N + LW
Sbjct: 135 NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 204 -KAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGR 237
+ PELL RD PI D++ I+ E+ R
Sbjct: 194 YRPPELLLGERDYGPPI------DLWGAGCIMAEMWTR 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-----LLWKAPELLRD 211
H +L + N +V S V +V+DFGL + E+D E Y + + W APE ++
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRV---IEDDP--EAVYTTTGGKIPVRWTAPEAIQY 222
Query: 212 THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----EEPFRPNLELLRD 267
+ T +DV+++ +++ E++ +G ++ +D EE +R +
Sbjct: 223 R----KFTSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVIKAIEEGYRLPAPM--- 271
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
C + M DCW + RP F I L M
Sbjct: 272 DCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHEL--RHCAENDSIGEHQYYR 199
G+T++H+ I H +LK N ++ S+ +++ DFGL ++ D IG Y
Sbjct: 133 GITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI- 190
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
APE+LR T+ +K DV++ VIL+ ++ PF G Y+
Sbjct: 191 -----APEVLRGTY-----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 20/156 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
GM +L H +L + N +V S V +V+DFG+ + + + W
Sbjct: 143 GMKYLSDMS-AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 201
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC----EEPFR- 259
APE + A + T +DV+++ +++ E++ +G ++ +D EE +R
Sbjct: 202 APEAI----AYRKFTSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVIKAIEEGYRL 253
Query: 260 -PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
P ++ C + M DCW + RP F I
Sbjct: 254 PPPMD-----CPIALHQLMLDCWQKERSDRPKFGQI 284
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 50/184 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE-HQYYR--- 199
+GM +LH H NL + N ++ + ++++ DFGL + ++ E H+YYR
Sbjct: 128 EGMAYLHAQHY-IHRNLAARNVLLDNDRLVKIGDFGLAK--------AVPEGHEYYRVRE 178
Query: 200 ----SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR------------------ 237
+ W APE L++ + +DV++F V L+E++
Sbjct: 179 DGDSPVFWYAPECLKE----YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 234
Query: 238 RGPFGGCGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
+G L E +GE P D C V M++CW RP F +
Sbjct: 235 QGQMTVLRLTELLERGERLPRP---------DKCPCEVYHLMKNCWETEASFRPTFENLI 285
Query: 296 ARLK 299
LK
Sbjct: 286 PILK 289
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
G+ FLH + H ++KS+N ++ + +++DFGL + + + +
Sbjct: 138 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-XVMXXRIVGTTAY 195
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
APE LR P K+D+Y+F V+L EII
Sbjct: 196 MAPEALRGEITP-----KSDIYSFGVVLLEII 222
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN--DSIGEHQYYR 199
G+T++H++ I H +LK N ++ S+ +++ DFGL ++ D IG Y
Sbjct: 138 GITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI- 195
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
APE+L T+ +K DV++ VIL+ ++ PF G Y+
Sbjct: 196 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 234
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAEN--DSIGEHQYYR 199
G+T+LH+ I H +LK N ++ S+ ++++ DFGL + + + +G Y
Sbjct: 148 GVTYLHKHNI-VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI- 205
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE+LR + +K DV++ VIL ++ PFGG
Sbjct: 206 -----APEVLRKKY-----DEKCDVWSIGVILFILLAGYPPFGG 239
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F + QGM FL S H ++ + N ++T+ V ++ DFGL +++ I
Sbjct: 166 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 222
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
+ + W APE + D T ++DV+++ ++L EI P+ G +
Sbjct: 223 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILV----NS 274
Query: 253 DCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
+ + ++ + + P + + M+ CWA P RP F I + L+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 33/181 (18%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
+GM++L + H +L + N +V S +++TDFGL L I E +Y+
Sbjct: 130 KGMSYLEDVRL-VHRDLAARNVLVKSPNHVKITDFGLARLL------DIDETEYHADGGK 182
Query: 201 --LLWKAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGGCGLYE-----PKG 251
+ W A E +LR R T ++DV+++ V + E++ P+ G E KG
Sbjct: 183 VPIKWMALESILRR-----RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG 237
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIID 311
E +P C V M CW E RP F + + M Q+ ++
Sbjct: 238 ERLPQP---------PICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVI 288
Query: 312 Q 312
Q
Sbjct: 289 Q 289
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN--DSIGEHQYYR 199
G+T++H++ I H +LK N ++ S+ +++ DFGL ++ D IG Y
Sbjct: 161 GITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI- 218
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
APE+L T+ +K DV++ VIL+ ++ PF G Y+
Sbjct: 219 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F + QGM FL S H ++ + N ++T+ V ++ DFGL +++ I
Sbjct: 162 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 218
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
+ + W APE + D T ++DV+++ ++L EI P+ G +
Sbjct: 219 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILV----NS 270
Query: 253 DCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
+ + ++ + + P + + M+ CWA P RP F I + L+
Sbjct: 271 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN--DSIGEHQYYR 199
G+T++H++ I H +LK N ++ S+ +++ DFGL ++ D IG Y
Sbjct: 162 GITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI- 219
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
APE+L T+ +K DV++ VIL+ ++ PF G Y+
Sbjct: 220 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 258
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F + QGM FL S H ++ + N ++T+ V ++ DFGL +++ I
Sbjct: 166 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 222
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
+ + W APE + D T ++DV+++ ++L EI P+ G +
Sbjct: 223 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILV----NS 274
Query: 253 DCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
+ + ++ + + P + + M+ CWA P RP F I + L+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F + QGM FL S H ++ + N ++T+ V ++ DFGL +++ I
Sbjct: 160 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 216
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED 253
+ + W APE + D T ++DV+++ ++L EI GL G
Sbjct: 217 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFS-------LGLNPYPGIL 265
Query: 254 CEEPF----RPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
F + ++ + + P + + M+ CWA P RP F I + L+
Sbjct: 266 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++F + QGM FL S H ++ + N ++T+ V ++ DFGL +++ I
Sbjct: 154 LLHFSSQVA-QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 210
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGE 252
+ + W APE + D T ++DV+++ ++L EI P+ G +
Sbjct: 211 KGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGLNPYPGILV----NS 262
Query: 253 DCEEPFRPNLELLRDSCEP-FVLACMRDCWAEAPESRPDFPTIRARLK 299
+ + ++ + + P + + M+ CWA P RP F I + L+
Sbjct: 263 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHELRHCAEN--DSIGEHQYYR 199
G+T++H++ I H +LK N ++ S+ +++ DFGL ++ D IG Y
Sbjct: 144 GITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI- 201
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
APE+L T+ +K DV++ VIL+ ++ PF G Y+
Sbjct: 202 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 240
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHEL--RHCAENDSIGEHQYYR 199
G+T++H+ I H +LK N ++ S+ +++ DFGL ++ D IG Y
Sbjct: 133 GITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI- 190
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
APE+LR T+ +K DV++ VIL+ ++ PF G Y+
Sbjct: 191 -----APEVLRGTY-----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGLHEL--RHCAENDSIGEHQYYR 199
G+T++H+ I H +LK N ++ S+ +++ DFGL ++ D IG Y
Sbjct: 133 GITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI- 190
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
APE+LR T+ +K DV++ VIL+ ++ PF G Y+
Sbjct: 191 -----APEVLRGTY-----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G+ +LH I H ++KS N ++ +V ++TDFG+ + E D Q + +
Sbjct: 150 RGLHYLHTRAI-IHRDVKSINILLDENFVPKITDFGIS--KKGTELD-----QTHLXXVV 201
Query: 204 KAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRG------PFGGCGLYEPKGED-- 253
K D I+G T+K+DVY+F V+L E++ R P L E E
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 254 ---CEEPFRPNLELLRDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLKH 300
E+ PNL D P L D C A + E RP + +L++
Sbjct: 262 NGQLEQIVDPNLA---DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
Q + FLH + + H N+KS N ++ +++TDFG CA+ I Q RS +
Sbjct: 128 QALEFLHSNQV-IHRNIKSDNILLGMDGSVKLTDFGF-----CAQ---ITPEQSKRSTMV 178
Query: 203 ----WKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
W APE++ R + P K D+++ ++ E+I P+
Sbjct: 179 GTPYWMAPEVVTRKAYGP-----KVDIWSLGIMAIEMIEGEPPY 217
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 28/174 (16%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G+ +LH I H ++KS N ++ +V ++TDFG+ + + +G Q + +
Sbjct: 150 RGLHYLHTRAI-IHRDVKSINILLDENFVPKITDFGISK-----KGTELG--QTHLXXVV 201
Query: 204 KAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRG------PFGGCGLYEPKGED-- 253
K D I+G T+K+DVY+F V+L E++ R P L E E
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 254 ---CEEPFRPNLELLRDSCEPFVLACMRD----CWAEAPESRPDFPTIRARLKH 300
E+ PNL D P L D C A + E RP + +L++
Sbjct: 262 NGQLEQIVDPNLA---DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 145 GMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
GM +L S +G H +L + N +V S V +V+DFGL + + + + W
Sbjct: 163 GMRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPFR 259
APE + A + +DV++F V++ E++ +G + D EE +R
Sbjct: 221 TAPEAI----AFRTFSSASDVWSFGVVMWEVLA----YGERPYWNMTNRDVISSVEEGYR 272
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ C + M DCW + RP F I + L +
Sbjct: 273 LPAPM---GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 145 GMTFLHRSPIG-CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
GM +L S +G H +L + N +V S V +V+DFGL + + + + W
Sbjct: 163 GMRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED----CEEPFR 259
APE + A + +DV++F V++ E++ +G + D EE +R
Sbjct: 221 TAPEAI----AFRTFSSASDVWSFGVVMWEVLA----YGERPYWNMTNRDVISSVEEGYR 272
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ C + M DCW + RP F I + L +
Sbjct: 273 LPAPM---GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G Y
Sbjct: 134 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 189
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFG 242
+PE L+ TH + ++D+++ + L E+ R P G
Sbjct: 190 --SPERLQGTHYSV----QSDIWSMGLSLVEMAVGRYPIG 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ + I YYR + W P
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMAQ--------DIYRASYYRKGGCAMLPVKWMPP 215
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 216 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 257
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 302
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLL 202
G+ FL I + +LK N ++ S +++ DFG+ C EN D + + +
Sbjct: 133 GLFFLQSKGI-IYRDLKLDNVMLDSEGHIKIADFGM-----CKENIWDGVTTKXFCGTPD 186
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
+ APE++ + P + D +AF V+L+E++ + PF +GED +E F+ +
Sbjct: 187 YIAPEII--AYQPY--GKSVDWWAFGVLLYEMLAGQAPF--------EGEDEDELFQSIM 234
Query: 263 E 263
E
Sbjct: 235 E 235
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 63/169 (37%), Gaps = 30/169 (17%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +L S H +L + N +V S +++ DFGL + + + + W
Sbjct: 137 KGMDYLG-SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 195
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR--------------RGPFGG----CG 245
APE L + I +DV++F V LHE++ GP G
Sbjct: 196 YAPECLMQSKFYI----ASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251
Query: 246 LYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
L E P PN C V MR CW P +R F +
Sbjct: 252 LVNTLKEGKRLPCPPN-------CPDEVYQLMRKCWEFQPSNRTSFQNL 293
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWV---LQVTDFGL--HELRHCAENDSIGEHQYYR 199
G+T+ H++ I H +LK N ++ S+ +++ DFGL H D IG Y
Sbjct: 138 GITYXHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYI- 195
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
APE+L T+ +K DV++ VIL+ ++ PF G Y+
Sbjct: 196 -----APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNGANEYD 234
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 63/169 (37%), Gaps = 30/169 (17%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +L S H +L + N +V S +++ DFGL + + + + W
Sbjct: 125 KGMDYLG-SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 183
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR--------------RGPFGG----CG 245
APE L + I +DV++F V LHE++ GP G
Sbjct: 184 YAPECLMQSKFYI----ASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 239
Query: 246 LYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
L E P PN C V MR CW P +R F +
Sbjct: 240 LVNTLKEGKRLPCPPN-------CPDEVYQLMRKCWEFQPSNRTSFQNL 281
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 20/121 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLL 202
G+ FLH+ I + +LK N ++ S +++ DFG+ C E+ D + ++ +
Sbjct: 132 GLFFLHKRGI-IYRDLKLDNVMLDSEGHIKIADFGM-----CKEHMMDGVTTREFCGTPD 185
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
+ APE++ + P + D +A+ V+L+E++ + PF GED +E F+ +
Sbjct: 186 YIAPEII--AYQPY--GKSVDWWAYGVLLYEMLAGQPPF--------DGEDEDELFQSIM 233
Query: 263 E 263
E
Sbjct: 234 E 234
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 229
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 230 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 271
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 316
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 229
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 230 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 271
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 316
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 12/105 (11%)
Query: 203 WKAPELLR----DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF 258
W APE L+ DT+ + AD ++FAV+L E++ R PF E + E
Sbjct: 174 WVAPEALQKKPEDTN-----RRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGL 228
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
RP + P V + C E P RP F I L+ +D
Sbjct: 229 RPTIP---PGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 215
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 216 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 257
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 302
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 229
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 230 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 271
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 316
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 180 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 231
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 232 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 273
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 274 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 318
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 215
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 216 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 257
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 302
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 170 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 221
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 222 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 263
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 264 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 308
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 214
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 215 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 256
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLL 202
G+ FL I + +LK N ++ S +++ DFG+ C EN D + + +
Sbjct: 454 GLFFLQSKGI-IYRDLKLDNVMLDSEGHIKIADFGM-----CKENIWDGVTTKXFCGTPD 507
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
+ APE++ + P + D +AF V+L+E++ + PF +GED +E F+ +
Sbjct: 508 YIAPEII--AYQPY--GKSVDWWAFGVLLYEMLAGQAPF--------EGEDEDELFQSIM 555
Query: 263 E 263
E
Sbjct: 556 E 556
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 155 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 206
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 207 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 248
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 249 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 293
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 190 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 241
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 242 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 283
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 284 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 328
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCAMLPVKWMPP 214
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 215 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 256
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 181 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRAGYYRKGGCAMLPVKWMPP 232
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 233 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 274
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 275 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 319
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
Q + FLH + + H ++KS N ++ +++TDFG CA+ I Q RS +
Sbjct: 128 QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGF-----CAQ---ITPEQSKRSXMV 178
Query: 203 ----WKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
W APE++ R + P K D+++ ++ E+I P+
Sbjct: 179 GTPYWMAPEVVTRKAYGP-----KVDIWSLGIMAIEMIEGEPPY 217
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
Q + F H++ I H ++K +N ++++ ++V DFG+ + N + +
Sbjct: 127 QALNFSHQNGI-IHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+PE R R +DVY+ +L+E++ PF G
Sbjct: 186 LSPEQARGDSVDAR----SDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 47/165 (28%)
Query: 157 HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAP 206
H ++ + NC++T V ++ DFG+ I YYR + W P
Sbjct: 204 HRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRAGYYRKGGCAMLPVKWMPP 255
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR 266
E + T K D ++F V+L EI Y P P + N E+L
Sbjct: 256 EAFMEGIF----TSKTDTWSFGVLLWEIFSLG--------YMPY------PSKSNQEVLE 297
Query: 267 -----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+C V M CW PE RP+F I R+++
Sbjct: 298 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 24/176 (13%)
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEND--SIGEHQYYRSLLWKAPELLR 210
P H + KS N +V S + D GL + H +D IG + + + APE+L
Sbjct: 132 PAIAHRDFKSRNVLVKSNLQCCIADLGL-AVMHSQGSDYLDIGNNPRVGTKRYMAPEVLD 190
Query: 211 DTHAP--IRGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKGEDCEE-- 256
+ + D++AF ++L EI R R PF +P ED ++
Sbjct: 191 EQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVV 250
Query: 257 ------PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
P PN L D + MR+CW P +R I+ L+ + + +
Sbjct: 251 CVDQQTPTIPN-RLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNSPE 305
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
Q + FLH + + H ++KS N ++ +++TDFG CA+ I Q RS +
Sbjct: 127 QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGF-----CAQ---ITPEQSKRSXMV 177
Query: 203 ----WKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
W APE++ R + P K D+++ ++ E+I P+
Sbjct: 178 GTPYWMAPEVVTRKAYGP-----KVDIWSLGIMAIEMIEGEPPY 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
G T+LH+ I H +LK N ++ S+ ++++ DFGL H + E +
Sbjct: 133 GTTYLHKHNI-VHRDLKPENLLLESKSRDALIKIVDFGLSA--HFEVGGKMKER--LGTA 187
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+ APE+LR + +K DV++ VIL+ ++ PFGG
Sbjct: 188 YYIAPEVLRKKY-----DEKCDVWSCGVILYILLCGYPPFGG 224
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
Q + FLH + + H ++KS N ++ +++TDFG CA+ I Q RS +
Sbjct: 127 QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGF-----CAQ---ITPEQSKRSTMV 177
Query: 203 ----WKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
W APE++ R + P K D+++ ++ E+I P+
Sbjct: 178 GTPYWMAPEVVTRKAYGP-----KVDIWSLGIMAIEMIEGEPPY 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS--IGEHQYYRSL 201
+GM FL S H +L + N ++T + ++ DFGL RH +NDS + + +
Sbjct: 179 KGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLA--RHI-KNDSNYVVKGNARLPV 234
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRP 260
W APE + + T ++DV+++ + L E+ P+ G + + +E FR
Sbjct: 235 KWMAPESIFNCVY----TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR- 289
Query: 261 NLELLRDSCEPF-VLACMRDCWAEAPESRPDFPTI 294
+L P + M+ CW P RP F I
Sbjct: 290 ---MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
Q + F H++ I H ++K +N ++++ ++V DFG+ + N + +
Sbjct: 127 QALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+PE R R +DVY+ +L+E++ PF G
Sbjct: 186 LSPEQARGDSVDAR----SDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 144 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV- 201
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A ++ +D++A I+++++ PF
Sbjct: 202 -----SPELLTEKSA----SKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
Q + F H++ I H ++K +N ++++ ++V DFG+ + N + +
Sbjct: 127 QALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+PE R R +DVY+ +L+E++ PF G
Sbjct: 186 LSPEQARGDSVDAR----SDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 50/191 (26%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE-HQYYR--- 199
+GM +LH H +L + N ++ + ++++ DFGL + ++ E H+ YR
Sbjct: 145 EGMAYLHAQHY-IHRDLAARNVLLDNDRLVKIGDFGLAK--------AVPEGHEXYRVRE 195
Query: 200 ----SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR------------------ 237
+ W APE L++ + +DV++F V L+E++
Sbjct: 196 DGDSPVFWYAPECLKE----YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 251
Query: 238 RGPFGGCGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
+G L E +GE P D C V M++CW RP F +
Sbjct: 252 QGQMTVLRLTELLERGERLPRP---------DKCPAEVYHLMKNCWETEASFRPTFENLI 302
Query: 296 ARLKHMKDGKQ 306
LK + + Q
Sbjct: 303 PILKTVHEKYQ 313
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
Q + F H++ I H ++K +N ++++ ++V DFG+ + N + +
Sbjct: 127 QALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+PE R R +DVY+ +L+E++ PF G
Sbjct: 186 LSPEQARGDSVDAR----SDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
Q + F H++ I H ++K +N ++++ ++V DFG+ + N + +
Sbjct: 127 QALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+PE R R +DVY+ +L+E++ PF G
Sbjct: 186 LSPEQARGDSVDAR----SDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
Q + F H++ I H ++K +N ++++ ++V DFG+ + N + +
Sbjct: 144 QALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC-EEPFRPNL 262
+PE R R +DVY+ +L+E++ PF G + E+P P+
Sbjct: 203 LSPEQARGDSVDAR----SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 258
Query: 263 --ELLRDSCEPFVLACMRDCWAEAPESR 288
E L + VL + A+ PE+R
Sbjct: 259 RHEGLSADLDAVVLKAL----AKNPENR 282
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G Y
Sbjct: 142 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 197
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PE L+ TH ++ +D+++ + L E+ R P
Sbjct: 198 --SPERLQGTHYSVQ----SDIWSMGLSLVEMAVGRYPI 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G Y
Sbjct: 177 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 232
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PE L+ TH ++ +D+++ + L E+ R P
Sbjct: 233 --SPERLQGTHYSVQ----SDIWSMGLSLVEMAVGRYPI 265
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G Y
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 170
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
+PE L+ TH + ++D+++ + L E+ G Y D +E RP +
Sbjct: 171 --SPERLQGTHYSV----QSDIWSMGLSLVEM--------AVGRYPIPPPDAKEDSRPPM 216
Query: 263 ELL 265
+
Sbjct: 217 AIF 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHE----LRHCAENDSIGEHQYYR 199
+GM +LH I H +LKS N + V+ +TDFGL L+ D + +
Sbjct: 141 KGMGYLHAKGI-LHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 200 SLLWKAPELLR----DTHA-PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC 254
L APE++R DT + ++ +DV+A I +E+ R PF E
Sbjct: 199 CHL--APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF-KTQPAEAIIWQM 255
Query: 255 EEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+PNL + E + + CWA E RP F + L+ +
Sbjct: 256 GTGMKPNLSQIGMGKE--ISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G Y
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 170
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PE L+ TH + ++D+++ + L E+ R P
Sbjct: 171 --SPERLQGTHYSV----QSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G Y
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 170
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PE L+ TH + ++D+++ + L E+ R P
Sbjct: 171 --SPERLQGTHYSV----QSDIWSMGLSLVEMAVGRYPI 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G+ FLH + I H +LK N +VTS +++ DFGL + + + +L +
Sbjct: 123 RGLDFLHANCI-VHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALFPVVVTLWY 177
Query: 204 KAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+APE LL+ T+A D+++ I E+ R+ F G
Sbjct: 178 RAPEVLLQSTYA-----TPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
G T+LH+ I H +LK N ++ S+ ++++ DFGL H + E +
Sbjct: 116 GTTYLHKHNI-VHRDLKPENLLLESKSRDALIKIVDFGLSA--HFEVGGKMKER--LGTA 170
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+ APE+LR + +K DV++ VIL+ ++ PFGG
Sbjct: 171 YYIAPEVLRKKY-----DEKCDVWSCGVILYILLCGYPPFGG 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G Y
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 170
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PE L+ TH + ++D+++ + L E+ R P
Sbjct: 171 --SPERLQGTHYSV----QSDIWSMGLSLVEMAVGRYPI 203
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 16/149 (10%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPI 216
H ++K +N +T+ V+++ D GL + + H + + +PE + +
Sbjct: 159 HRDIKPANVFITATGVVKLGDLGLGRF---FSSKTTAAHSLVGTPYYMSPERIHENGYNF 215
Query: 217 RGTQKADVYAFAVILHEIIGRRGPFGG--CGLYE--PKGEDCEEPFRPNLELLRDSCEPF 272
K+D+++ +L+E+ + PF G LY K E C+ P P+ D
Sbjct: 216 ----KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS-----DHYSEE 266
Query: 273 VLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ + C PE RPD + K M
Sbjct: 267 LRQLVNMCINPDPEKRPDVTYVYDVAKRM 295
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
Q + FLH + + H ++KS N ++ +++TDFG CA+ I Q RS +
Sbjct: 127 QALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGF-----CAQ---ITPEQSKRSEMV 177
Query: 203 ----WKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
W APE++ R + P K D+++ ++ E+I P+
Sbjct: 178 GTPYWMAPEVVTRKAYGP-----KVDIWSLGIMAIEMIEGEPPY 216
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G Y
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM---- 170
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PE L+ TH + ++D+++ + L E+ R P
Sbjct: 171 --SPERLQGTHYSV----QSDIWSMGLSLVEMAVGRYPI 203
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G+ FLH + I H +LK N +VTS +++ DFGL + + + +L +
Sbjct: 123 RGLDFLHANCI-VHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALDPVVVTLWY 177
Query: 204 KAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+APE LL+ T+A D+++ I E+ R+ F G
Sbjct: 178 RAPEVLLQSTYA-----TPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G+ FLH + I H +LK N +VTS +++ DFGL + + + +L +
Sbjct: 123 RGLDFLHANCI-VHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALAPVVVTLWY 177
Query: 204 KAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+APE LL+ T+A D+++ I E+ R+ F G
Sbjct: 178 RAPEVLLQSTYA-----TPVDMWSVGCIFAEMFRRKPLFCG 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+G+ FLH + I H +LK N +VTS +++ DFGL + + + +L +
Sbjct: 131 RGLDFLHANCI-VHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALTPVVVTLWY 185
Query: 204 KAPE-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+APE LL+ T+A D+++ I E+ R+ F G
Sbjct: 186 RAPEVLLQSTYA-----TPVDMWSVGCIFAEMFRRKPLFCG 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 144 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 201
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 202 -----SPELLTEKSA----XKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N+ +G Y
Sbjct: 118 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYM---- 173
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE 248
+PE L+ TH + ++D+++ + L E+ R P ++E
Sbjct: 174 --SPERLQGTHYSV----QSDIWSMGLSLVEMAVGRYPRPPMAIFE 213
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAP 215
H ++K N +V++ + DFG+ + +G +L + APE ++HA
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG--NTVGTLYYXAPERFSESHA- 212
Query: 216 IRGTQKADVYAFAVILHEIIGRRGPFGG 243
T +AD+YA +L+E + P+ G
Sbjct: 213 ---TYRADIYALTCVLYECLTGSPPYQG 237
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 34/180 (18%)
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--------NDSIGEHQYYRSLLWK 204
P H +LKS N +V + D GL ++ ++ N +G +Y
Sbjct: 161 PAIAHRDLKSKNILVKKNGTCCIADLGL-AVKFISDTNEVDIPPNTRVGTKRYM------ 213
Query: 205 APELLRDT--HAPIRGTQKADVYAFAVILHEIIGR----------RGPFGGCGLYEPKGE 252
PE+L ++ + AD+Y+F +IL E+ R + P+ +P E
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYE 273
Query: 253 D-----CEEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGK 305
D C + RP+ D C + M +CWA P SR ++ L M + +
Sbjct: 274 DMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 145 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV- 202
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 203 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 50/191 (26%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE-HQYYR--- 199
+GM +LH H L + N ++ + ++++ DFGL ++ E H+YYR
Sbjct: 123 EGMAYLHAQHY-IHRALAARNVLLDNDRLVKIGDFGL--------AKAVPEGHEYYRVRE 173
Query: 200 ----SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG------------------R 237
+ W APE L++ + +DV++F V L+E++
Sbjct: 174 DGDSPVFWYAPECLKEC----KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHT 229
Query: 238 RGPFGGCGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
+G L E +GE P D C + M++CW RP F +
Sbjct: 230 QGQMTVLRLTELLERGERLPRP---------DRCPCEIYHLMKNCWETEASFRPTFQNLV 280
Query: 296 ARLKHMKDGKQ 306
L+ ++ Q
Sbjct: 281 PILQTAQEKYQ 291
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 50/191 (26%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE-HQYYR--- 199
+GM +LH H L + N ++ + ++++ DFGL ++ E H+YYR
Sbjct: 122 EGMAYLHAQHY-IHRALAARNVLLDNDRLVKIGDFGL--------AKAVPEGHEYYRVRE 172
Query: 200 ----SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIG------------------R 237
+ W APE L++ + +DV++F V L+E++
Sbjct: 173 DGDSPVFWYAPECLKEC----KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHT 228
Query: 238 RGPFGGCGLYE--PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIR 295
+G L E +GE P D C + M++CW RP F +
Sbjct: 229 QGQMTVLRLTELLERGERLPRP---------DRCPCEIYHLMKNCWETEASFRPTFQNLV 279
Query: 296 ARLKHMKDGKQ 306
L+ ++ Q
Sbjct: 280 PILQTAQEKYQ 290
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 122 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 179
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY 247
+PELL + A + +D++A I+++++ PF Y
Sbjct: 180 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPFRAGNEY 218
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 144 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 201
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 202 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 144 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 201
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 202 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 149 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 206
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 207 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 145 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 202
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 203 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 235
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 121 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 178
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY 247
+PELL + A + +D++A I+++++ PF Y
Sbjct: 179 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPFRAGNEY 217
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 144 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 201
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 202 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 147 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 204
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 205 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 120 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 177
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY 247
+PELL + A + +D++A I+++++ PF Y
Sbjct: 178 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPFRAGNEY 216
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 119 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 176
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLY 247
+PELL + A + +D++A I+++++ PF Y
Sbjct: 177 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPFRAGNEY 215
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 142 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 199
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 200 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 142 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 199
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 200 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 144 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 201
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 202 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 141 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV- 198
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 199 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 142 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 199
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 200 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 125 HSDIIIITYLMNFGD-GIPRQ-----------GMTFLHRSPIGCHGNLKSSNCVVTSRWV 172
H D + TYL + G+P + G+ FLH + H +LK N +VTS
Sbjct: 100 HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHRDLKPQNILVTSSGQ 158
Query: 173 LQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVIL 231
+++ DFGL + + +L ++APE LL+ ++A D+++ I
Sbjct: 159 IKLADFGLARIYSF----QMALTSVVVTLWYRAPEVLLQSSYA-----TPVDLWSVGCIF 209
Query: 232 HEIIGRRGPFGG 243
E+ R+ F G
Sbjct: 210 AEMFRRKPLFRG 221
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 142 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV- 199
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 200 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 125 HSDIIIITYLMNFGD-GIPRQ-----------GMTFLHRSPIGCHGNLKSSNCVVTSRWV 172
H D + TYL + G+P + G+ FLH + H +LK N +VTS
Sbjct: 100 HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHRDLKPQNILVTSSGQ 158
Query: 173 LQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVIL 231
+++ DFGL + + + +L ++APE LL+ ++A D+++ I
Sbjct: 159 IKLADFGLARIY----SFQMALTSVVVTLWYRAPEVLLQSSYA-----TPVDLWSVGCIF 209
Query: 232 HEIIGRRGPFGG 243
E+ R+ F G
Sbjct: 210 AEMFRRKPLFRG 221
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 126 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 183
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 184 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 125 HSDIIIITYLMNFGD-GIPRQ-----------GMTFLHRSPIGCHGNLKSSNCVVTSRWV 172
H D + TYL + G+P + G+ FLH + H +LK N +VTS
Sbjct: 100 HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHRDLKPQNILVTSSGQ 158
Query: 173 LQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE-LLRDTHAPIRGTQKADVYAFAVIL 231
+++ DFGL + + +L ++APE LL+ ++A D+++ I
Sbjct: 159 IKLADFGLARIYSF----QMALTSVVVTLWYRAPEVLLQSSYA-----TPVDLWSVGCIF 209
Query: 232 HEIIGRRGPFGG 243
E+ R+ F G
Sbjct: 210 AEMFRRKPLFRG 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-----ELRHCAENDSIGEHQYYR 199
+ +LH I H +LK N ++ +Q+TDFG E + N +G QY
Sbjct: 141 ALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV- 198
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+PELL + A + +D++A I+++++ PF
Sbjct: 199 -----SPELLTEKSA----CKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLL 202
+GM FL S H +L + N ++T + ++ DFGL ++++ +++ + + +
Sbjct: 172 KGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN--DSNYVVKGNARLPVK 228
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
W APE + + T ++DV+++ + L E+ P+ G + + +E FR
Sbjct: 229 WMAPESIFNCVY----TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR-- 282
Query: 262 LELLRDSCEPF-VLACMRDCWAEAPESRPDFPTI 294
+L P + M+ CW P RP F I
Sbjct: 283 --MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 314
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS--IGEHQYYRSL 201
+GM FL S H +L + N ++T + ++ DFGL +NDS + + +
Sbjct: 174 KGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGL---ARDIKNDSNYVVKGNARLPV 229
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRP 260
W APE + + T ++DV+++ + L E+ P+ G + + +E FR
Sbjct: 230 KWMAPESIFNCVY----TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR- 284
Query: 261 NLELLRDSCEPF-VLACMRDCWAEAPESRPDFPTI 294
+L P + M+ CW P RP F I
Sbjct: 285 ---MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 316
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLL 202
+GM FL S H +L + N ++T + ++ DFGL ++++ +++ + + +
Sbjct: 179 KGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN--DSNYVVKGNARLPVK 235
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
W APE + + T ++DV+++ + L E+ P+ G + + +E FR
Sbjct: 236 WMAPESIFNCVY----TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR-- 289
Query: 262 LELLRDSCEPF-VLACMRDCWAEAPESRPDFPTI 294
+L P + M+ CW P RP F I
Sbjct: 290 --MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Query: 135 MNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFG----LHELRHCAEND 190
+NF + I G+ H I H ++K N ++ S L++ DFG L E N
Sbjct: 114 INFTNQI-LDGIKHAHDMRI-VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH 171
Query: 191 SIGEHQYYRSLLWKAPELLRDTHAPIRGTQK-ADVYAFAVILHEIIGRRGPFGG 243
+G QY+ +PE A T + D+Y+ ++L+E++ PF G
Sbjct: 172 VLGTVQYF------SPE-----QAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLL 202
+GM FL S H +L + N ++T + ++ DFGL ++++ +++ + + +
Sbjct: 156 KGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN--DSNYVVKGNARLPVK 212
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYEPKGEDCEEPFRPN 261
W APE + + T ++DV+++ + L E+ P+ G + + +E FR
Sbjct: 213 WMAPESIFNCVY----TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR-- 266
Query: 262 LELLRDSCEPF-VLACMRDCWAEAPESRPDFPTI 294
+L P + M+ CW P RP F I
Sbjct: 267 --MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 30/180 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRH-CAENDSIGEHQYYRSLLW 203
G+ +LH I H ++K N ++T+ L+++ G+ E H A +D+ Q S +
Sbjct: 121 GLEYLHSQGI-VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ--GSPAF 177
Query: 204 KAPELLR--DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYE-----PKGE---- 252
+ PE+ DT + K D+++ V L+ I PF G +Y+ KG
Sbjct: 178 QPPEIANGLDTFSGF----KVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP 233
Query: 253 -DCEEPFRPNLE--LLRDSCEPFVLACMRD-CW-------AEAPESRPDFPTIRARLKHM 301
DC P L+ L + + F + +R W AEAP P P + R + M
Sbjct: 234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWRSM 293
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVL---QVTDFGLHEL--RHCAENDSIGEHQYYR 199
G+ +LH+ I H ++K N ++ ++ L ++ DFGL + D +G Y
Sbjct: 158 GICYLHKHNI-VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI- 215
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE+L+ + +K DV++ VI++ ++ PFGG
Sbjct: 216 -----APEVLKKKY-----NEKCDVWSCGVIMYILLCGYPPFGG 249
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 43/169 (25%)
Query: 98 SLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCH 157
+LNL D V++ ++ E LKL+ + I+ L G+ LH I H
Sbjct: 92 NLNLQDLVESKNVS---DENLKLQKEYNP----ISLLRQIASGVAH-----LHSLKI-IH 138
Query: 158 GNLKSSNCVVT--SRWV-----------LQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
+LK N +V+ SR+ + ++DFGL C + DS G+ + +L
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-----CKKLDS-GQSSFRTNLNNP 192
Query: 203 -----WKAPELLRDTH---APIRGTQKADVYAFAVILHEIIGR-RGPFG 242
W+APELL +++ R T+ D+++ + + I+ + + PFG
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 17/149 (11%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCV---VTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
+ + H + H +LK N + + +++ DFGL EL E+ + +
Sbjct: 136 ALAYFHSQHV-VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA----GTA 190
Query: 202 LWKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRP 260
L+ APE+ RD T K D+++ V+++ ++ PF G L E + + + P
Sbjct: 191 LYMAPEVFKRDV------TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK--EP 242
Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRP 289
N + P + ++ + PE RP
Sbjct: 243 NYAVECRPLTPQAVDLLKQMLTKDPERRP 271
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE---HQYYRSL 201
G+ FLH I + +LK N ++ +++ DFG+ C EN +G+ +++ +
Sbjct: 131 GLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGM-----CKEN-MLGDAKTNEFCGTP 183
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+ APE+L + D ++F V+L+E++ + PF G
Sbjct: 184 DYIAPEILLGQ----KYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 43/169 (25%)
Query: 98 SLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCH 157
+LNL D V++ ++ E LKL+ + I+ L G+ LH I H
Sbjct: 92 NLNLQDLVESKNVS---DENLKLQKEYNP----ISLLRQIASGVAH-----LHSLKI-IH 138
Query: 158 GNLKSSNCVVT--SRWV-----------LQVTDFGLHELRHCAENDSIGEHQYYRSLL-- 202
+LK N +V+ SR+ + ++DFGL C + DS G+ + +L
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-----CKKLDS-GQXXFRXNLNNP 192
Query: 203 -----WKAPELLRDTH---APIRGTQKADVYAFAVILHEIIGR-RGPFG 242
W+APELL +++ R T+ D+++ + + I+ + + PFG
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G+ LH+ I + +LK N ++ ++++D GL + + G Y + +
Sbjct: 301 GLEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG---YAGTPGFM 356
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APELL D +A V L+E+I RGPF
Sbjct: 357 APELLLGEEYDF----SVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G+ LH+ I + +LK N ++ ++++D GL + + G Y + +
Sbjct: 301 GLEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG---YAGTPGFM 356
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APELL D +A V L+E+I RGPF
Sbjct: 357 APELLLGEEYDF----SVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G+ LH+ I + +LK N ++ ++++D GL + + G Y + +
Sbjct: 301 GLEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG---YAGTPGFM 356
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APELL D +A V L+E+I RGPF
Sbjct: 357 APELLLGEEYDF----SVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G+ LH+ I + +LK N ++ ++++D GL + + G Y + +
Sbjct: 301 GLEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG---YAGTPGFM 356
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APELL D +A V L+E+I RGPF
Sbjct: 357 APELLLGEEYDF----SVDYFALGVTLYEMIAARGPF 389
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 24/173 (13%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA 214
H +LK+ N ++ + +++ DFG +E + D+ + S + APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-----FCGSPPYAAPELFQGKKY 189
Query: 215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--------------GEDCEEPFRP 260
+ DV++ VIL+ ++ PF G L E + DCE +
Sbjct: 190 ---DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQM 313
L +L S + M+D W + A L KD ++ ++ M
Sbjct: 247 FL-ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAPLPDYKDPRRTELMVSM 298
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE---HQYYRSL 201
G+ FLH I + +LK N ++ +++ DFG+ C EN +G+ + + +
Sbjct: 130 GLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGM-----CKEN-MLGDAKTNXFCGTP 182
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+ APE+L + D ++F V+L+E++ + PF G
Sbjct: 183 DYIAPEILLGQ----KYNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 149 LHRS-PIGCHGNLKSSNCVVTSRWVLQVTDFG-------LHELRHCAENDSIGEHQYYRS 200
+HR P H +LK N +++++ +++ DFG + A+ ++ E + R+
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 201 L--LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+++ PE++ D ++ +K D++A IL+ + R+ PF
Sbjct: 212 TTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 36/205 (17%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLLW 203
+ + H+ I H +LK+ N ++ + +++ DFG +E + D+ + S +
Sbjct: 123 AVQYCHQKRI-VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-----FCGSPPY 176
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK------------- 250
APEL + + DV++ VIL+ ++ PF G L E +
Sbjct: 177 AAPELFQGKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 233
Query: 251 -GEDCEEPFRPNLEL---LRDSCEPFVLACMRDCWAEAPESRPDF-PTIRARLKHMKDGK 305
DCE + L L R + E M+D W A + P + L D
Sbjct: 234 MSTDCENLLKRFLVLNPIKRGTLE----QIMKDRWINAGHEEDELKPFVEPEL----DIS 285
Query: 306 QKNIIDQMMEMMEKQKNIIDQMMEM 330
+ ID M+ M Q+ I + + +M
Sbjct: 286 DQKRIDIMVGMGYSQEEIQESLSKM 310
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 30/207 (14%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRS---------PIGCHGNLKSSNCVVTSRWVLQ 174
+ ++++ L + + + R G+ +LH P H ++KS N ++ +
Sbjct: 113 LKANVVSWNELCHIAETMAR-GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171
Query: 175 VTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGT-QKADVYAFAVILHE 233
+ DFGL L+ A + H + + APE+L R + D+YA ++L E
Sbjct: 172 IADFGL-ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230
Query: 234 IIGR----RGPFGGCGL-------YEPKGEDCEEPF-----RPNLELLRDSCEPFVLAC- 276
+ R GP L P ED +E RP L + C
Sbjct: 231 LASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCE 290
Query: 277 -MRDCWAEAPESRPDFPTIRARLKHMK 302
+ +CW E+R + R+ M+
Sbjct: 291 TIEECWDHDAEARLSAGCVGERITQMQ 317
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA 214
H +LK+ N ++ + +++ DFG +E + D+ + S + APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-----FCGSPPYAAPELFQGKKY 189
Query: 215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--------------GEDCEEPFRP 260
+ DV++ VIL+ ++ PF G L E + DCE +
Sbjct: 190 ---DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 261 NLELLRDSCEPFVLACMRDCW 281
L +L S + M+D W
Sbjct: 247 FL-ILNPSKRGTLEQIMKDRW 266
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA 214
H +LK+ N ++ + +++ DFG +E + D ++ S + APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD-----EFCGSPPYAAPELFQGKKY 189
Query: 215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--------------GEDCEEPFRP 260
+ DV++ VIL+ ++ PF G L E + DCE +
Sbjct: 190 ---DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 261 NLELLRDSCEPFVLACMRDCW 281
L +L S + M+D W
Sbjct: 247 FL-ILNPSKRGTLEQIMKDRW 266
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA 214
H +LK+ N ++ + +++ DFG +E + D+ + S + APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-----FCGSPPYAAPELFQGKKY 189
Query: 215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--------------GEDCEEPFRP 260
+ DV++ VIL+ ++ PF G L E + DCE +
Sbjct: 190 ---DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 261 NLELLRDSCEPFVLACMRDCW 281
L +L S + M+D W
Sbjct: 247 FL-ILNPSKRGTLEQIMKDRW 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 159 NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL-RDTHAPIR 217
+LK N ++ +++TDFGL + E + + + ++ + APE++ R H
Sbjct: 151 DLKPENILLDEEGHIKLTDFGLSKESIDHEKKA---YSFCGTVEYMAPEVVNRRGH---- 203
Query: 218 GTQKADVYAFAVILHEIIGRRGPFGG 243
TQ AD ++F V++ E++ PF G
Sbjct: 204 -TQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 159 NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL-RDTHAPIR 217
+LK N ++ +++TDFGL + E + + + ++ + APE++ R H
Sbjct: 152 DLKPENILLDEEGHIKLTDFGLSKESIDHEKKA---YSFCGTVEYMAPEVVNRRGH---- 204
Query: 218 GTQKADVYAFAVILHEIIGRRGPFGG 243
TQ AD ++F V++ E++ PF G
Sbjct: 205 -TQSADWWSFGVLMFEMLTGTLPFQG 229
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 159 NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELL-RDTHAPIR 217
+LK N ++ +++TDFGL + E + + + ++ + APE++ R H
Sbjct: 151 DLKPENILLDEEGHIKLTDFGLSKESIDHEKKA---YSFCGTVEYMAPEVVNRRGH---- 203
Query: 218 GTQKADVYAFAVILHEIIGRRGPFGG 243
TQ AD ++F V++ E++ PF G
Sbjct: 204 -TQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|1WC0|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp
pdb|1WC0|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp
pdb|1WC3|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Strontium
pdb|1WC3|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Strontium
pdb|1WC4|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Europium
pdb|1WC4|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp And Europium
pdb|1WC5|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|C Chain C, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|1WC5|D Chain D, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Alpha,Beta-Methylene-Atp In Presence Of Bicarbonate
pdb|2BW7|A Chain A, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|B Chain B, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|C Chain C, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
pdb|2BW7|D Chain D, A Novel Mechanism For Adenylyl Cyclase Inhibition From The
Crystal Structure Of Its Complex With Catechol Estrogen
Length = 219
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 374 RGYGVEPESYDLVTIYFSDIVGFTAMS 400
RG + PE L+TI FSDIVGFT MS
Sbjct: 17 RGSHMRPEPR-LITILFSDIVGFTRMS 42
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYRSLLWKAPELLRDTHA 214
H +LK+ N ++ + +++ DFG +E + D+ + S + APEL +
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-----FCGSPPYAAPELFQGKKY 182
Query: 215 PIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--------------GEDCEEPFRP 260
+ DV++ VIL+ ++ PF G L E + DCE +
Sbjct: 183 ---DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 239
Query: 261 NLELLRDSCEPFVLACMRDCW 281
L +L S + M+D W
Sbjct: 240 FL-ILNPSKRGTLEQIMKDRW 259
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 149 LHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLLWKAP 206
LH+ I + +LK N ++ + +++TDFGL C E+ D H + ++ + AP
Sbjct: 137 LHQKGI-IYRDLKPENIMLNHQGHVKLTDFGL-----CKESIHDGTVTHXFCGTIEYMAP 190
Query: 207 E-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
E L+R H + D ++ ++++++ PF G
Sbjct: 191 EILMRSGH-----NRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 149 LHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAEN--DSIGEHQYYRSLLWKAP 206
LH+ I + +LK N ++ + +++TDFGL C E+ D H + ++ + AP
Sbjct: 137 LHQKGI-IYRDLKPENIMLNHQGHVKLTDFGL-----CKESIHDGTVTHTFCGTIEYMAP 190
Query: 207 E-LLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
E L+R H + D ++ ++++++ PF G
Sbjct: 191 EILMRSGH-----NRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL--HELRHCAENDSIGEHQYYRSL 201
+ + LH H ++K SN ++ + +++ DFG+ + + A++ G Y
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYM--- 176
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKGEDCEEPFRP 260
APE + + K+D+++ + + E+ R P+ G ++ + EEP P
Sbjct: 177 ---APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-SP 232
Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
L + S E + C + + RP +P +
Sbjct: 233 QLPADKFSAE--FVDFTSQCLKKNSKERPTYPEL 264
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G+ LHR I + +LK N ++ ++++D GL H E +I ++ +
Sbjct: 298 GLEDLHRERI-VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR--VGTVGYM 352
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE++++ R T D +A +L+E+I + PF
Sbjct: 353 APEVVKNE----RYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 144 QGMTFLHR--SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
+G+ +LH P H ++K++N ++ + V DFGL +L D ++
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY--KDXHVXXAVRGTI 207
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE L + + ++K DV+ + V+L E+I + F
Sbjct: 208 GHIAPEYL----STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSI-GEHQYYRSLL 202
+ + H+ I H +LK+ N ++ + +++ DFG +E + D+ G Y
Sbjct: 126 AVQYCHQKRI-VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPY----- 179
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK------------ 250
APEL + + DV++ VIL+ ++ PF G L E +
Sbjct: 180 -AAPELFQGKKYD---GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 235
Query: 251 --GEDCEEPFRPNLEL---LRDSCEPFVLACMRDCWAEAPESRPDF-PTIRARLKHMKDG 304
DCE + L L R + E M+D W A + P + L D
Sbjct: 236 YMSTDCENLLKRFLVLNPIKRGTLE----QIMKDRWINAGHEEDELKPFVEPEL----DI 287
Query: 305 KQKNIIDQMMEMMEKQKNIIDQMMEM 330
+ ID M+ M Q+ I + + +M
Sbjct: 288 SDQKRIDIMVGMGYSQEEIQESLSKM 313
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 26/142 (18%)
Query: 156 CHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSI-GEHQYYRSLLWKAPELLRDTH 213
H +LK+ N ++ + +++ DFG +E + D+ G Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPY------AAPELFQGKK 188
Query: 214 APIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--------------GEDCEEPFR 259
+ DV++ VIL+ ++ PF G L E + DCE +
Sbjct: 189 Y---DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLK 245
Query: 260 PNLELLRDSCEPFVLACMRDCW 281
L +L S + M+D W
Sbjct: 246 KFL-ILNPSKRGTLEQIMKDRW 266
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G T LHR +LK +N + + +++ DFGL + + E+ + ++ + +
Sbjct: 134 GHTVLHR-------DLKPANVFLDGKQNVKLGDFGLARILNHDEDFA---KEFVGTPYYM 183
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
+PE + + +K+D+++ +L+E+ PF E G+ E FR
Sbjct: 184 SPEQMN----RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G+ LHR I + +LK N ++ ++++D GL H E +I ++ +
Sbjct: 298 GLEDLHRERI-VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR--VGTVGYM 352
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE++++ R T D +A +L+E+I + PF
Sbjct: 353 APEVVKNE----RYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G T LHR +LK +N + + +++ DFGL + +D+ + + +
Sbjct: 134 GHTVLHR-------DLKPANVFLDGKQNVKLGDFGLARI---LNHDTSFAKTFVGTPYYM 183
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
+PE + + +K+D+++ +L+E+ PF E G+ E FR
Sbjct: 184 SPEQMNR----MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G T LHR +LK +N + + +++ DFGL + +D+ + + +
Sbjct: 134 GHTVLHR-------DLKPANVFLDGKQNVKLGDFGLARI---LNHDTSFAKAFVGTPYYM 183
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR 259
+PE + + +K+D+++ +L+E+ PF E G+ E FR
Sbjct: 184 SPEQMNR----MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ + HR I H +LK N ++ +++ DFGL + S G Y
Sbjct: 115 AVEYCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY----- 168
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE++ + + DV++ VIL+ ++ RR PF
Sbjct: 169 -AAPEVIS---GKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ + HR I H +LK N ++ +++ DFGL + S G Y
Sbjct: 119 AVEYCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY----- 172
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE++ + + DV++ VIL+ ++ RR PF
Sbjct: 173 -AAPEVIS---GKLYAGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ + HR I H +LK N ++ +++ DFGL + S G Y
Sbjct: 125 AVEYCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY----- 178
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE++ + + DV++ VIL+ ++ RR PF
Sbjct: 179 -AAPEVIS---GKLYAGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL--HELRHCAENDSIGEHQYYRSL 201
+ + LH H ++K SN ++ + +++ DFG+ + + A+ G Y
Sbjct: 164 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYM--- 220
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGL-YEPKGEDCEEPFRP 260
APE + + K+D+++ + + E+ R P+ G ++ + EEP P
Sbjct: 221 ---APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-SP 276
Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
L + S E + C + + RP +P +
Sbjct: 277 QLPADKFSAE--FVDFTSQCLKKNSKERPTYPEL 308
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ + HR I H +LK N ++ +++ DFGL + S G Y
Sbjct: 124 AVEYCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY----- 177
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE++ + + DV++ VIL+ ++ RR PF
Sbjct: 178 -AAPEVIS---GKLYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 144 QGMTFLHR--SPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
+G+ +LH P H ++K++N ++ + V DFGL +L D +
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY--KDXHVXXAVRGXI 199
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE L + + ++K DV+ + V+L E+I + F
Sbjct: 200 GHIAPEYL----STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ +LH + +LK N ++ +++TDFGL C E D + +
Sbjct: 122 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPE 176
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ APE+L D + D + V+++E++ R PF
Sbjct: 177 YLAPEVLEDNDY----GRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
+ +++LH + H ++KS + ++TS ++++DFG CA+ + + R L
Sbjct: 152 RALSYLHNQGV-IHRDIKSDSILLTSDGRIKLSDFGF-----CAQ---VSKEVPKRKXLV 202
Query: 203 ----WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPF 258
W APE++ + P GT+ D+++ +++ E+I P+ EP
Sbjct: 203 GTPYWMAPEVI--SRLPY-GTE-VDIWSLGIMVIEMIDGEPPY------------FNEPP 246
Query: 259 RPNLELLRDSCEPFV 273
+ +RDS P V
Sbjct: 247 LQAMRRIRDSLPPRV 261
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ +LH + +LK N ++ +++TDFGL C E D + +
Sbjct: 121 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPE 175
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ APE+L D + D + V+++E++ R PF
Sbjct: 176 YLAPEVLEDNDY----GRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL----------HELRHCAENDSIGE 194
G F+H S I H +LK +NC++ ++V DFGL + + EN+ G
Sbjct: 141 GENFIHESGI-IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 195 HQ---------YYRSLLWKAPE--LLRDTHAPIRGTQKADVYAFAVILHEIIG 236
H + + ++APE LL++ + T+ D+++ I E++
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENY-----TKSIDIWSTGCIFAELLN 247
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ +LH + +LK N ++ +++TDFGL C E D + +
Sbjct: 120 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPE 174
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ APE+L D + D + V+++E++ R PF
Sbjct: 175 YLAPEVLEDNDY----GRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
+LH + + +LK N ++ + +QVTDFG + A G +Y APE
Sbjct: 177 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYL------APE 229
Query: 208 LLRDTHAPIRGTQKA-DVYAFAVILHEIIGRRGPF 241
++ +G KA D +A V+++E+ PF
Sbjct: 230 IILS-----KGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ +LH + +LK N ++ +++TDFGL C E D + +
Sbjct: 263 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKTFCGTPE 317
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ APE+L D + D + V+++E++ R PF
Sbjct: 318 YLAPEVLEDNDY----GRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE--NDSIGEHQYYRSLL 202
+ +LH + +LK N ++ +++TDFGL C E D + +
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKTFCGTPE 314
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ APE+L D + D + V+++E++ R PF
Sbjct: 315 YLAPEVLEDNDY----GRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1WC1|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas
pdb|1WC1|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas
pdb|1WC1|C Chain C, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas
pdb|1WC6|A Chain A, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas In Presence Of Bicarbonate
pdb|1WC6|B Chain B, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas In Presence Of Bicarbonate
pdb|1WC6|C Chain C, Soluble Adenylyl Cyclase Cyac From S. Platensis In Complex
With Rp-atpalphas In Presence Of Bicarbonate
Length = 226
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 385 LVTIYFSDIVGFTAMS 400
L+TI FSDIVGFT MS
Sbjct: 34 LITILFSDIVGFTRMS 49
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL 180
G+ ++H + I H +LK +NC+V ++V DFGL
Sbjct: 168 GVKYVHSAGI-LHRDLKPANCLVNQDCSVKVCDFGL 202
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL 180
G F+H S I H +LK +NC++ +++ DFGL
Sbjct: 143 GEKFIHESGI-IHRDLKPANCLLNQDCSVKICDFGL 177
>pdb|3HTK|B Chain B, Crystal Structure Of Mms21 And Smc5 Complex
Length = 73
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 29/44 (65%)
Query: 305 KQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTME 348
K K+I DQ+ +++ KQ++++ +M M+ N ++L++ + ++
Sbjct: 5 KIKDIDDQIQQLLLKQRHLLSKMASSMKSLKNCQKELISTQILQ 48
>pdb|3MR7|A Chain A, Crystal Structure Of AdenylateGUANYLATE CYCLASEHYDROLASE
FROM Silicibacter Pomeroyi
pdb|3MR7|B Chain B, Crystal Structure Of AdenylateGUANYLATE CYCLASEHYDROLASE
FROM Silicibacter Pomeroyi
pdb|3MR7|C Chain C, Crystal Structure Of AdenylateGUANYLATE CYCLASEHYDROLASE
FROM Silicibacter Pomeroyi
Length = 189
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 6 LFGDTVNTASRMESTGEPLRIHIS 29
+FGD VN A+R+E+ EP I +S
Sbjct: 112 IFGDAVNVAARLEAISEPGAICVS 135
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G+ LH I + +LK N ++ +++TDFGL + A + + + ++ +
Sbjct: 142 GLDHLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYM 197
Query: 205 APELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE++ R H + AD +++ V++ E++ PF G
Sbjct: 198 APEVVNRQGH-----SHSADWWSYGVLMFEMLTGSLPFQG 232
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
+LH + + +LK N ++ + +QVTDFGL + G +Y APE
Sbjct: 156 YLHSLDL-IYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYL------APE 208
Query: 208 LLRDTHAPIRGTQKA-DVYAFAVILHEIIGRRGPF 241
++ +G KA D +A V+++E+ PF
Sbjct: 209 IILS-----KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3K1L|B Chain B, Crystal Structure Of Fancl
pdb|3K1L|A Chain A, Crystal Structure Of Fancl
Length = 381
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 329 EMMEKYANNLEDLVN--QRTME----VYEEKRKTEDLLHRMLPAPVASR-LTRGYGVEPE 381
EM+ K A NLE+ +N ++ +E Y+ ++L H + P+P++S+ TR + ++
Sbjct: 170 EMLTKSAGNLEEALNLFRKLLEDLRPFYDNFMDIDELCHVLQPSPISSKHKTRLFPLKDR 229
Query: 382 SYDLVTI 388
Y +TI
Sbjct: 230 VYLKLTI 236
>pdb|2QJM|A Chain A, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|B Chain B, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|C Chain C, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|D Chain D, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
Length = 402
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 149 LHRSPIGCHG--NLKSSNCVVTSRWVLQVTDFGLHE-LRHCAENDSIGEHQYY 198
L++ GCHG +L + V +FG+ E +RH E D++ H Y+
Sbjct: 304 LYQVRTGCHGATDLSPVTMGCALHFDTWVPNFGIQEYMRHTEETDAVFPHDYW 356
>pdb|2QJJ|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJN|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
Length = 402
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 149 LHRSPIGCHG--NLKSSNCVVTSRWVLQVTDFGLHE-LRHCAENDSIGEHQYY 198
L++ GCHG +L + V +FG+ E +RH E D++ H Y+
Sbjct: 304 LYQVRTGCHGATDLSPVTMGCALHFDTWVPNFGIQEYMRHTEETDAVFPHDYW 356
>pdb|3R4E|A Chain A, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|B Chain B, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|C Chain C, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|D Chain D, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
Length = 418
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 149 LHRSPIGCHG--NLKSSNCVVTSRWVLQVTDFGLHE-LRHCAENDSIGEHQYY 198
L++ GCHG +L + V +FG+ E +RH E D++ H Y+
Sbjct: 320 LYQVRTGCHGPTDLSPVTMGCALHFDTWVPNFGIQEYMRHTEETDAVFPHDYW 372
>pdb|2A3L|A Chain A, X-Ray Structure Of Adenosine 5'-Monophosphate Deaminase
From Arabidopsis Thaliana In Complex With Coformycin
5'-Phosphate
Length = 701
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLERPV 410
V+P+S+ + ++ +VGF + ES P RP
Sbjct: 441 VDPDSHPQLHVFLKQVVGFDLVDDESKPERRPT 473
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,750,268
Number of Sequences: 62578
Number of extensions: 554647
Number of successful extensions: 2085
Number of sequences better than 100.0: 496
Number of HSP's better than 100.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 357
Number of HSP's that attempted gapping in prelim test: 1608
Number of HSP's gapped (non-prelim): 537
length of query: 413
length of database: 14,973,337
effective HSP length: 101
effective length of query: 312
effective length of database: 8,652,959
effective search space: 2699723208
effective search space used: 2699723208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)