RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16840
(413 letters)
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK;
2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B*
1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B*
2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B*
3maa_B* 1cul_B*
Length = 220
Score = 131 bits (333), Expect = 2e-36
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
P+Y ++G+TVN ASRM+STG +I ++ L L GY RG++ +KGKG++ T
Sbjct: 144 KPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL-GYTCTCRGIINVKGKGDLKT 202
Query: 61 YWLVGATEGAVQ 72
Y++ ++
Sbjct: 203 YFVNTEMSRSLS 214
Score = 57.6 bits (140), Expect = 7e-10
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 374 RGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLERPV 410
+ + +SYD V + F+ I F ES + +
Sbjct: 3 KNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGL 39
Score = 57.6 bits (140), Expect = 9e-10
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 12/58 (20%)
Query: 79 VSGLPIKNGDSHAGE----------IASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
+GL HA E + + L+ + I KLR+GI+
Sbjct: 77 ATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKLD--AINKHSFNDFKLRVGINH 132
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1,
metal-binding, CGMP biosynthesis, nucleotide-B cyclase,
GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Length = 219
Score = 131 bits (331), Expect = 3e-36
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAAL----DKLGGYIVEERGVVCMKGKG 56
MPRYCLFG+TVN SR E+TGE +I++S L + + +E RG V MKGK
Sbjct: 130 MPRYCLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKK 189
Query: 57 EVLTYWLVGATEGAVQGRERNQ 78
E + W + + +++
Sbjct: 190 EPMQVWFLSRKNTGTEETKQDD 211
Score = 63.5 bits (155), Expect = 8e-12
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 79 VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
VSGLP + HA I ++L++++ ++ +++ IGIH+
Sbjct: 75 VSGLP-EPCIHHARSICHLALDMMEIAGQVQVDGES---VQITIGIHT 118
Score = 61.6 bits (150), Expect = 4e-11
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 375 GYGVEPESYDLVTIYFSDIVGFTAMSAESTPLERPV 410
V + YD VTI FS IVGF A ++ E +
Sbjct: 2 KRPVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAM 37
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics,
PSI, protein structure initiative; 2.70A {Mycobacterium
tuberculosis}
Length = 204
Score = 127 bits (322), Expect = 4e-35
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
RYC++GD VN ASRMEST +I + L +++ ERG + +KGKG + T
Sbjct: 122 RFRYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLK--DDFVLRERGHINVKGKGVMRT 179
Query: 61 YWLVG----ATEGAVQGRERNQVS 80
++L+G A G V+G E
Sbjct: 180 WYLIGRKVAADPGEVRGAEPRTAG 203
Score = 63.0 bits (154), Expect = 8e-12
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 79 VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
VSG+P D H +A +L++ + K + LR+G+ +
Sbjct: 66 VSGVPRPRPD-HTQALADFALDMTNVAAQLKDPRG--NPVPLRVGLAT 110
Score = 62.6 bits (153), Expect = 1e-11
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
+ + YD ++ F+DIVGFT ++ + P +
Sbjct: 3 IIADKYDEASVLFADIVGFTERASSTAPAD 32
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural
genomics, structural genomics conso SGC, CGMP
biosynthesis; 2.08A {Homo sapiens}
Length = 225
Score = 124 bits (313), Expect = 1e-33
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEV-- 58
MPRYCLFG+ V A++ ES P +I++SP L G++ R +
Sbjct: 126 MPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGFVFTPRSREELPPNFPSEI 185
Query: 59 ------LTYWLVGATEGAVQGRERNQVS 80
L + G ++ +
Sbjct: 186 PGICHFLDAYQQGTNSKPCFQKKDVEDG 213
Score = 66.2 bits (162), Expect = 1e-12
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 374 RGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
+G V+ + + VT+ FSDIVGFTA+ ++ +PL+
Sbjct: 3 QGQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQ 36
Score = 65.4 bits (160), Expect = 2e-12
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 79 VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
GL K D+HA +IA M+L +++ H E +K+RIG+HS
Sbjct: 70 AGGLH-KESDTHAVQIALMALKMMELSDEVMSPHG--EPIKMRIGLHS 114
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic,
lyase, membrane, transmembrane; 2.55A {Chlamydomonas
reinhardtii} PDB: 3et6_B
Length = 190
Score = 115 bits (289), Expect = 2e-30
Identities = 36/68 (52%), Positives = 43/68 (63%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLT 60
MPR+ LFGDTVNTASRMES GE +IHIS AC L + + ERG + +KGKG + T
Sbjct: 122 MPRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRSKERFEIRERGNITVKGKGTMRT 181
Query: 61 YWLVGATE 68
Y L
Sbjct: 182 YLLSPLER 189
Score = 65.4 bits (160), Expect = 9e-13
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 79 VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
V + + D HA + +L + + ++A E +++R+G+HS
Sbjct: 66 VCNVTVPCDD-HADVLLEFALRMHEEAS--RVASSLGEPVRIRVGMHS 110
Score = 62.7 bits (153), Expect = 1e-11
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
+ + T+ FSDIVGFT +++ S+PLE
Sbjct: 2 APAQEHPEATVLFSDIVGFTEIASRSSPLE 31
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 115 bits (290), Expect = 1e-29
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+GM +LH I H +LKS+N + +++ DFGL + E Q S+LW
Sbjct: 131 RGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE-QLSGSILW 188
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG-CGLYEPKGEDCEEPFRPNL 262
APE++R + ++DVYAF ++L+E++ + P+ + P+L
Sbjct: 189 MAPEVIRMQD-SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247
Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+R +C + M +C + + RP FP I A ++ +
Sbjct: 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 112 bits (282), Expect = 2e-28
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
+GM +LH R+P H NLKS N +V ++ ++V DFGL L+ S
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE--- 204
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
W APE+LRD + +K+DVY+F VIL E+ + P+G + + R +
Sbjct: 205 WMAPEVLRDEPS----NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ P V A + CW P RP F TI L+ +
Sbjct: 261 ---PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 110 bits (276), Expect = 8e-28
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 13/161 (8%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
+GM FLH P+ L S + ++ +++ + + +
Sbjct: 122 RGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVK--FSFQSPGRMY------APA 173
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
W APE L+ + AD+++FAV+L E++ R PF E + E RP +
Sbjct: 174 WVAPEALQKKPEDTN-RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI 232
Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
P V M+ C E P RP F I L+ M+D
Sbjct: 233 ---PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 109 bits (275), Expect = 2e-27
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL--HELRHCAENDSIGEHQYYRSL 201
QGM +LH I H ++KS+N + +++ DFGL + R
Sbjct: 143 QGMDYLHAKNI-IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL-- 199
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFR-P 260
W APE++R + ++DVY++ ++L+E++ P+ + + P
Sbjct: 200 -WMAPEVIRMQD-NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP 257
Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
+L L +C + + DC + E RP FP I + ++ ++
Sbjct: 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 107 bits (269), Expect = 1e-26
Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 39/241 (16%)
Query: 108 HKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRS---PIGCHGNLKSSN 164
H P T + QG+ +LH + H +LK N
Sbjct: 91 HGAEPLPYYTAAHAMSWCLQC--------------SQGVAYLHSMQPKAL-IHRDLKPPN 135
Query: 165 CVVTSRW-VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPELLRDTHAPIRGTQKAD 223
++ + VL++ DFG ++ G S W APE+ ++ ++K D
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNNKG------SAAWMAPEVFEGSNY----SEKCD 185
Query: 224 VYAFAVILHEIIGRRGPFGGCGLYEPK-GEDCEEPFRPNLELLRDSCEPFVLACMRDCWA 282
V+++ +IL E+I RR PF G + RP L + + + M CW+
Sbjct: 186 VFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL---IKNLPKPIESLMTRCWS 242
Query: 283 EAPESRPDFPTIRARLKHMK------DGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYAN 336
+ P RP I + H+ D + + E + + +
Sbjct: 243 KDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVEPYVDFAEFYRLWS 302
Query: 337 N 337
Sbjct: 303 V 303
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 106 bits (267), Expect = 4e-26
Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 12/166 (7%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR--SL 201
+GM +LH I H +LKS N + + +TDFGL + + + + L
Sbjct: 141 KGMGYLHAKGI-LHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 202 LWKAPELLRDTHAPIRG-----TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEE 256
APE++R ++ +DV+A I +E+ R PF +
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ-MGT 257
Query: 257 PFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
+P L + + + CWA E RP F + L+ +
Sbjct: 258 GMKP--NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 105 bits (265), Expect = 6e-26
Identities = 53/215 (24%), Positives = 77/215 (35%), Gaps = 38/215 (17%)
Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGN 159
L +K+ Q R+ DI GM +LH I H +
Sbjct: 93 TLRGIIKSMDS----QYPWSQRVSFAKDIA--------------SGMAYLHSMNI-IHRD 133
Query: 160 LKSSNCVVTSRWVLQVTDFGL-----------HELRHCAENDSIGEHQYYRSLLWKAPEL 208
L S NC+V + V DFGL LR + D + + W APE+
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 209 LRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-D 267
+ +K DV++F ++L EIIGR Y P+ D R L+
Sbjct: 194 INGRSY----DEKVDVFSFGIVLCEIIGRVNADPD---YLPRTMDFGLNVRGFLDRYCPP 246
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
+C P C PE RP F + L+ ++
Sbjct: 247 NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 103 bits (258), Expect = 2e-25
Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 40/206 (19%)
Query: 108 HKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRS---PIGCHGNLKSSN 164
+++ + + + I +GM +LH PI H +LKSSN
Sbjct: 94 NRVLSGKRIPPDILVNWAVQIA--------------RGMNYLHDEAIVPI-IHRDLKSSN 138
Query: 165 CVVT--------SRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLLWKAPELLRDTHAP 215
++ S +L++TDFGL H S G + W APE++R +
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG------AYAWMAPEVIRASMF- 191
Query: 216 IRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLRDSCEPFVLA 275
++ +DV+++ V+L E++ PF G + +C
Sbjct: 192 ---SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP---STCPEPFAK 245
Query: 276 CMRDCWAEAPESRPDFPTIRARLKHM 301
M DCW P SRP F I +L +
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQLTTI 271
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 103 bits (258), Expect = 3e-25
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRW-----VLQVTDFGLHELRHCAENDSIGEHQY 197
G+ ++ ++P H +L+S N + S +V DFGL + + + +G
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLG---- 188
Query: 198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK--GEDCE 255
+ W APE + T+KAD Y+FA+IL+ I+ GPF + K E
Sbjct: 189 --NFQWMAPETIGAEEESY--TEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
E RP + + C P + + CW+ P+ RP F I L +
Sbjct: 245 EGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing
protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A
{Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A*
1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A*
3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A*
1tl7_A*
Length = 220
Score = 100 bits (252), Expect = 5e-25
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEE--RGVVCMKGKGE- 57
++ ++ + V A+ ME+ G+ RIHI+ A + L+ G Y VE G K
Sbjct: 146 KWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLN--GDYEVEPGCGGERNAYLKEHS 203
Query: 58 VLTYWLVGATE 68
+ T+ ++ T+
Sbjct: 204 IETFLILRCTQ 214
Score = 63.4 bits (155), Expect = 8e-12
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 79 VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
VSGLP D HA M +++++A+ + + +R+GIHS
Sbjct: 90 VSGLPEARAD-HAHCCVEMGMDMIEAIS--LVREMTGVNVNMRVGIHS 134
Score = 60.7 bits (148), Expect = 6e-11
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 352 EKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
++ + + + + +D V+I F+DI GFT+++++ T E
Sbjct: 4 HHHHAMEMKADINAKQ---EDMMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQE 56
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 102 bits (256), Expect = 8e-25
Identities = 41/188 (21%), Positives = 68/188 (36%), Gaps = 33/188 (17%)
Query: 144 QGMTFLHRSPIGCHGN-------LKSSNCVVTSRWVLQVTDFGL----HELRHCAENDSI 192
G+ LH G G LKS N +V + D GL + + + +
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 193 GEHQYYRSLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPK 250
R + APE+L +T ++ D++AF ++L E+ R G Y+P
Sbjct: 176 PRVGTKR---YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232
Query: 251 GED---------------CEEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESRPDFPT 293
D C + RPN+ D + M++CW + P +R
Sbjct: 233 FYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALR 292
Query: 294 IRARLKHM 301
I+ L +
Sbjct: 293 IKKTLTKI 300
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 101 bits (253), Expect = 2e-24
Identities = 46/193 (23%), Positives = 71/193 (36%), Gaps = 29/193 (15%)
Query: 144 QGMTFLHRSPIGCHGN-------LKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEH 195
G+ LH +G G LKS N +V + D GL + I +
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 196 QYYRSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED 253
+ + APE+L D+ ++AD+YA ++ EI R G Y+ D
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
Query: 254 ---------------CEEPFRPNLELLRDSCEPFVLAC--MRDCWAEAPESRPDFPTIRA 296
CE+ RPN+ SCE + MR+CW +R I+
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290
Query: 297 RLKHMKDGKQKNI 309
L + +Q+ I
Sbjct: 291 TLSQLS--QQEGI 301
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 102 bits (255), Expect = 2e-24
Identities = 41/189 (21%), Positives = 62/189 (32%), Gaps = 33/189 (17%)
Query: 145 GMTFLHRSPIGCHGN-------LKSSNCVVTSRWVLQVTDFGL----HELRHCAENDSIG 193
G+ LH G LKS N +V + D GL + +
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKG 251
R + PE+L ++ AD+Y+F +IL E+ R G Y+
Sbjct: 206 RVGTKR---YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262
Query: 252 ED---------------CEEPFRPNL--ELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
D C + RP+ D C + M +CWA P SR +
Sbjct: 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322
Query: 295 RARLKHMKD 303
+ L M +
Sbjct: 323 KKTLAKMSE 331
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 101 bits (253), Expect = 4e-24
Identities = 46/193 (23%), Positives = 71/193 (36%), Gaps = 29/193 (15%)
Query: 144 QGMTFLHRSPIGCHGN-------LKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEH 195
G+ LH +G G LKS N +V + D GL + I +
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 209
Query: 196 QYYRSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGED 253
+ + APE+L D+ ++AD+YA ++ EI R G Y+ D
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269
Query: 254 ---------------CEEPFRPNLELLRDSCEPFVLAC--MRDCWAEAPESRPDFPTIRA 296
CE+ RPN+ SCE + MR+CW +R I+
Sbjct: 270 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329
Query: 297 RLKHMKDGKQKNI 309
L + +Q+ I
Sbjct: 330 TLSQLS--QQEGI 340
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 89.8 bits (223), Expect = 3e-20
Identities = 39/208 (18%), Positives = 74/208 (35%), Gaps = 34/208 (16%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC---------HGNLKSSNCVVTSRWVLQ 174
+ ++++ L + + + R G+ +LH G H ++KS N ++ +
Sbjct: 113 LKANVVSWNELCHIAETMAR-GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171
Query: 175 VTDFGLHELRHCAENDSIGEHQY--YRSLLWKAPELLRDTHAPIRG-TQKADVYAFAVIL 231
+ DFGL ++ Q R + APE+L R + D+YA ++L
Sbjct: 172 IADFGLALKFEAGKSAGDTHGQVGTRR---YMAPEVLEGAINFQRDAFLRIDMYAMGLVL 228
Query: 232 HEIIGRRGPFGG-CGLYEPKGED---------------CEEPFRPNL--ELLRDSCEPFV 273
E+ R G Y E+ + RP L + + +
Sbjct: 229 WELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAML 288
Query: 274 LACMRDCWAEAPESRPDFPTIRARLKHM 301
+ +CW E+R + R+ M
Sbjct: 289 CETIEECWDHDAEARLSAGCVGERITQM 316
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 84.1 bits (208), Expect = 3e-18
Identities = 44/217 (20%), Positives = 70/217 (32%), Gaps = 49/217 (22%)
Query: 144 QGMTFLHRSPIGC--------HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH 195
+G+ +LH H +L S N +V + ++DFGL GE
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 196 QYYRSLL-----WKAPELLRDT---HAPIRGTQKADVYAFAVILHEIIGR---RGPFGGC 244
+ APE+L ++ D+YA +I EI R P
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241
Query: 245 GLYE----------PKGED-----CEEPFRPNL--ELLRDSCEPFVLA-CMRDCWAEAPE 286
Y+ P ED E RP +S L + DCW + E
Sbjct: 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAE 301
Query: 287 SRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNI 323
+R R+ ++M + E+ K++
Sbjct: 302 ARLTAQXAEERMA------------ELMMIWERNKSV 326
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes,
adenylyl cyclases, monomer-dimer, catalysis, lyase;
1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Length = 235
Score = 77.6 bits (191), Expect = 1e-16
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 1 MPRYCLFGDTVNTASRMESTGEPLRIHISPACKAAL--DKLGGYIVEERGVVCMKGKGEV 58
Y +G T N A+R ES ++ ++ A +L + V G V ++G +
Sbjct: 151 TKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVALRGVSDP 210
Query: 59 LTYWLVGATEG 69
+ + +
Sbjct: 211 VKMYQLNTVPS 221
Score = 41.8 bits (98), Expect = 2e-04
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 378 VEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
E D VT+ F+DI TA+ + P
Sbjct: 5 APKEPTDPVTLIFTDIESSTALW-AAHPDL 33
Score = 30.2 bits (68), Expect = 0.98
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 28/75 (37%)
Query: 79 VSGLPIKNGDSHAGEIASMSLN-------LLDAVKNHKIAHRPQET-------------- 117
S P A E+ L+ L D+ + + E
Sbjct: 67 ASKSPFAAVQ-LAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVY 125
Query: 118 ------LKLRIGIHS 126
L++R+GIH+
Sbjct: 126 SRLWNGLRVRVGIHT 140
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase;
HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB:
1y11_A*
Length = 407
Score = 78.5 bits (193), Expect = 4e-16
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 3 RYCLFGDTVNTASRMESTGEPLRIHISPACKAALDKL---GGYIVEERGVVCMKG-KGEV 58
FG VN ASR+ P + ++ + + AL G+ G ++G +G+V
Sbjct: 310 AGDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPRRLRGIRGDV 369
Query: 59 LTYWLVGATEGAVQGRER 76
+ + G
Sbjct: 370 RLFRVRRGATRTGSGGAA 387
Score = 67.3 bits (164), Expect = 2e-12
Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 10/110 (9%)
Query: 298 LKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTE 357
L H + + ++ +M + +I ++ + L + +
Sbjct: 138 LSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPM----------IQDMLF 187
Query: 358 DLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIVGFTAMSAESTPLE 407
L M+ + R G VT+ F+D+VGFT + + E
Sbjct: 188 MQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEE 237
Score = 27.6 bits (61), Expect = 8.6
Identities = 9/48 (18%), Positives = 14/48 (29%), Gaps = 14/48 (29%)
Query: 79 VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHS 126
V P + L L++ V +LR G+ S
Sbjct: 270 VCPDPA--------PLLDTVLKLVEVVD------TDNNFPRLRAGVAS 303
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 73.4 bits (181), Expect = 6e-15
Identities = 48/214 (22%), Positives = 77/214 (35%), Gaps = 69/214 (32%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
I ++T M G G+ GM +L HR +L
Sbjct: 78 ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR-------DL 130
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL------WKAPELLRDTHA 214
+ NC+V V++V+DFG+ + + QY S W +PE+ +
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRF--------VLDDQYTSSTGTKFPVKWASPEVFSFS-- 180
Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
R + K+DV++F V++ E+ G+ P+ E G +P
Sbjct: 181 --RYSSKSDVWSFGVLMWEVFSEGKI-PYENRSNSEVVEDISTGFRLYKP---------R 228
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
V M CW E PE RP F + +L +
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 74.6 bits (184), Expect = 8e-15
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
GM +L H +L + NC+VT + VL+++DFG+ + Y S
Sbjct: 224 AGMEYLESKCC-IHRDLAARNCLVTEKNVLKISDFGMSRE--------EADGVYAASGGL 274
Query: 203 ------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----P 249
W APE L R + ++DV++F ++L E G P+ +
Sbjct: 275 RQVPVKWTAPEALNYG----RYSSESDVWSFGILLWETFSLGAS-PYPNLSNQQTREFVE 329
Query: 250 KGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMK 302
KG P + C V M CWA P RP F TI L+ ++
Sbjct: 330 KGGRLPCP---------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 74.2 bits (182), Expect = 8e-15
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 39/193 (20%)
Query: 124 IHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHE 182
++ D + + +L+ + + + GM FL + C H +L + N +++ + V+++ DFGL
Sbjct: 185 LYKDFLTLEHLICYSFQVAK-GMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLA- 240
Query: 183 LRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
R ++ Y L W APE + D T ++DV++F V+L EI
Sbjct: 241 -RDIYKDP------DYVRKGDARLPLKWMAPETIFDR----VYTIQSDVWSFGVLLWEIF 289
Query: 236 GR-RGPFGGCGLYE------PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESR 288
P+ G + E +G P D P + M DCW P R
Sbjct: 290 SLGASPYPGVKIDEEFCRRLKEGTRMRAP---------DYTTPEMYQTMLDCWHGEPSQR 340
Query: 289 PDFPTIRARLKHM 301
P F + L ++
Sbjct: 341 PTFSELVEHLGNL 353
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 73.4 bits (181), Expect = 1e-14
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 48/196 (24%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
H D I YL+N+ I + GM +L HR +L + N +V + +++TDF
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRLVHR-------DLAARNVLVKTPQHVKITDF 161
Query: 179 GLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHAPIRGTQKADVYAFAVILH 232
GL + + Y + + W A E + T ++DV+++ V +
Sbjct: 162 GL--AKLLGAEEK-----EYHAEGGKVPIKWMALESILHR----IYTHQSDVWSYGVTVW 210
Query: 233 EII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP 285
E++ G + P+ G E KGE +P C V MR CW
Sbjct: 211 ELMTFGSK-PYDGIPASEISSILEKGERLPQP---------PICTIDVYMIMRKCWMIDA 260
Query: 286 ESRPDFPTIRARLKHM 301
+SRP F + M
Sbjct: 261 DSRPKFRELIIEFSKM 276
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 73.1 bits (180), Expect = 1e-14
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 37/198 (18%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHEL 183
H + + L+ + I + GM +L C H +L + N +V S +++ DFGL +L
Sbjct: 120 HRARLDASRLLLYSSQICK-GMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKL 176
Query: 184 RHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII- 235
++ YY W APE L D ++++DV++F V+L+E+
Sbjct: 177 LPLDKD-------YYVVREPGQSPIFWYAPESLSDN----IFSRQSDVWSFGVVLYELFT 225
Query: 236 -GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAE 283
+ + + CE LL +C V M+ CWA
Sbjct: 226 YCDK-SCSPSAEF-LRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAP 283
Query: 284 APESRPDFPTIRARLKHM 301
+P+ RP F + +L +
Sbjct: 284 SPQDRPSFSALGPQLDML 301
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 74.1 bits (182), Expect = 2e-14
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 23/174 (13%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++ I GM ++ R H +L+++N +V V +V DFGL R +N+
Sbjct: 365 LVDMAAQI-ASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLA--RLIEDNEYTA 420
Query: 194 EHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE---- 248
+ W APE R T K+DV++F ++L E+ + R P+ G E
Sbjct: 421 RQGAKFPIKWTAPEAALYG----RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 476
Query: 249 -PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+G P C + M CW + PE RP F ++A L+
Sbjct: 477 VERGYRMPCP---------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 71.9 bits (177), Expect = 2e-14
Identities = 47/216 (21%), Positives = 78/216 (36%), Gaps = 69/216 (31%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
I IIT M G + + M +L HR +L
Sbjct: 94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR-------DL 146
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL------WKAPELLRDTHA 214
+ NC+V + V++V+DFGL + + +Y S+ W PE+L +
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRY--------VLDDEYTSSVGSKFPVRWSPPEVLMYS-- 196
Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
+ + K+D++AF V++ EI G+ P+ E +G P
Sbjct: 197 --KFSSKSDIWAFGVLMWEIYSLGKM-PYERFTNSETAEHIAQGLRLYRP---------H 244
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
V M CW E + RP F + + + + D
Sbjct: 245 LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 73.3 bits (180), Expect = 2e-14
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 35/180 (19%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIG 193
L++ I GM ++ R H +L+++N +V V +V DFGL R I
Sbjct: 282 LVDMAAQI-ASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLA--RL------IE 331
Query: 194 EHQYYRSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGL 246
+++Y W APE R T K+DV++F ++L E+ + R P+ G
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYG----RFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387
Query: 247 YE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
E +G P C + M CW + PE RP F ++A L+
Sbjct: 388 REVLDQVERGYRMPCP---------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 71.9 bits (177), Expect = 3e-14
Identities = 47/222 (21%), Positives = 79/222 (35%), Gaps = 64/222 (28%)
Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFL------HRSPIGCHGNLKS 162
AH P + + + +++ I GM +L HR +L +
Sbjct: 110 AHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS-GMVYLASQHFVHR-------DLAT 161
Query: 163 SNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAP 215
NC+V + ++++ DFG+ R D YYR ++L W PE +
Sbjct: 162 RNCLVGANLLVKIGDFGMS--RDVYSTD------YYRVGGHTMLPIRWMPPESIMYR--- 210
Query: 216 IRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR------- 266
+ T ++DV++F VIL EI G++ P+ N E++
Sbjct: 211 -KFTTESDVWSFGVILWEIFTYGKQ-PWFQ---------------LSNTEVIECITQGRV 253
Query: 267 ----DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDG 304
C V M CW P+ R + I L +
Sbjct: 254 LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 71.1 bits (175), Expect = 3e-14
Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 69/216 (31%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
I I+T ++ G + GM FL HR +L
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR-------DL 130
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL------WKAPELLRDTHA 214
+ NC+V ++V+DFG+ + + QY S+ W APE+
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRY--------VLDDQYVSSVGTKFPVKWSAPEVFHYF-- 180
Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
+ + K+DV+AF +++ E+ G+ P+ E +G P
Sbjct: 181 --KYSSKSDVWAFGILMWEVFSLGKM-PYDLYTNSEVVLKVSQGHRLYRP---------H 228
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
+ M CW E PE RP F + + ++ +++
Sbjct: 229 LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain,
signaling helix, S-helix, CGMP biosynthesis, cytoplasm,
GTP-binding, heme, iron; 2.15A {Rattus norvegicus}
Length = 66
Score = 65.9 bits (161), Expect = 4e-14
Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 312 QMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASR 371
+ + ++ +Q ++ + +E + L+ + +EK+KT+ LL+ +LP VA+
Sbjct: 7 RDLVLLGEQFREEYKLTQELEMLTDRLQLT----LRALEDEKKKTDTLLYSVLPPSVANE 62
Query: 372 L 372
L
Sbjct: 63 L 63
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 72.5 bits (178), Expect = 5e-14
Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 27/194 (13%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI 192
L+ I M +L + H NL + NC+V +++V DFGL R +
Sbjct: 320 LLYMATQISS-AMEYLEKK--NFIHRNLAARNCLVGENHLVKVADFGLS--RLMTGDTYT 374
Query: 193 GEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGGCGLYE--- 248
+ W APE L + + K+DV+AF V+L EI P+ G L +
Sbjct: 375 AHAGAKFPIKWTAPESLAYN----KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 430
Query: 249 --PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQ 306
K E P + C V MR CW P RP F I + M ++
Sbjct: 431 LLEKDYRMERP---------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF--QE 479
Query: 307 KNIIDQMMEMMEKQ 320
+I D++ + + K+
Sbjct: 480 SSISDEVEKELGKR 493
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 71.2 bits (175), Expect = 6e-14
Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 37/198 (18%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHEL 183
+ + I + + + I + GM +L H +L + N +V S +++ DFGL
Sbjct: 119 NKNKINLKQQLKYAVQICK-GMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLT-- 173
Query: 184 RHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII- 235
+ + YY W APE L + + +DV++F V LHE++
Sbjct: 174 KAIETDKE-----YYTVKDDRDSPVFWYAPECLMQS----KFYIASDVWSFGVTLHELLT 224
Query: 236 -GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAE 283
+ G L+ +C V MR CW
Sbjct: 225 YCDSDSSPMALFLKMIG--PTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 282
Query: 284 APESRPDFPTIRARLKHM 301
P +R F + + +
Sbjct: 283 QPSNRTSFQNLIEGFEAL 300
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 70.7 bits (174), Expect = 7e-14
Identities = 41/223 (18%), Positives = 83/223 (37%), Gaps = 51/223 (22%)
Query: 100 NLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HG 158
+LL+ ++ + + +T + + + L++F + + GM FL + C H
Sbjct: 113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK-GMAFL--ASKNCIHR 169
Query: 159 NLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRD 211
+L + N ++T + ++ DFGL R + Y + L W APE + +
Sbjct: 170 DLAARNILLTHGRITKICDFGLA--RDIKNDS------NYVVKGNARLPVKWMAPESIFN 221
Query: 212 THAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR--- 266
T ++DV+++ + L E+ G P+ G + + +
Sbjct: 222 C----VYTFESDVWSYGIFLWELFSLGSS-PYPG--------------MPVDSKFYKMIK 262
Query: 267 --------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ + M+ CW P RP F I ++
Sbjct: 263 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 70.8 bits (174), Expect = 8e-14
Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 50/197 (25%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
H + L+N+G I + GM +L HR NL + N ++ S +QV DF
Sbjct: 108 HRGALGPQLLLNWGVQIAK-GMYYLEEHGMVHR-------NLAARNVLLKSPSQVQVADF 159
Query: 179 GLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFAVIL 231
G+ +L + + W A E + + T ++DV+++ V +
Sbjct: 160 GVADL--------LPPDDKQLLYSEAKTPIKWMALESIHFG----KYTHQSDVWSYGVTV 207
Query: 232 HEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEA 284
E++ G P+ G L E KGE +P C V M CW
Sbjct: 208 WELMTFGAE-PYAGLRLAEVPDLLEKGERLAQP---------QICTIDVYMVMVKCWMID 257
Query: 285 PESRPDFPTIRARLKHM 301
RP F + M
Sbjct: 258 ENIRPTFKELANEFTRM 274
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 70.3 bits (173), Expect = 8e-14
Identities = 46/221 (20%), Positives = 82/221 (37%), Gaps = 64/221 (28%)
Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFL------HRSPIGCHGNLKS 162
P + + + ++ I GM +L H+ +L +
Sbjct: 105 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA-GMEYLSSHHVVHK-------DLAT 156
Query: 163 SNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAP 215
N +V + ++++D GL R D YY+ SLL W APE +
Sbjct: 157 RNVLVYDKLNVKISDLGLF--REVYAAD------YYKLLGNSLLPIRWMAPEAIMYG--- 205
Query: 216 IRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR------- 266
+ + +D++++ V+L E+ G + P+ G N +++
Sbjct: 206 -KFSIDSDIWSYGVVLWEVFSYGLQ-PYCG---------------YSNQDVVEMIRNRQV 248
Query: 267 ----DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKD 303
D C +V A M +CW E P RP F I +RL+ +
Sbjct: 249 LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 70.4 bits (173), Expect = 1e-13
Identities = 47/215 (21%), Positives = 84/215 (39%), Gaps = 69/215 (32%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
++++ + G + Q GM +L HR +L
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR-------DL 136
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-------LLWKAPELLRDTH 213
+ N ++ +R +++DFGL + +DS YY + L W APE +
Sbjct: 137 AARNVLLVNRHYAKISDFGLS--KALGADDS-----YYTARSAGKWPLKWYAPECINFR- 188
Query: 214 APIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLR 266
+ + ++DV+++ V + E + G++ P+ E +G+ E P
Sbjct: 189 ---KFSSRSDVWSYGVTMWEALSYGQK-PYKKMKGPEVMAFIEQGKRMECP--------- 235
Query: 267 DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
C P + A M DCW E RPDF T+ R++
Sbjct: 236 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 70.4 bits (173), Expect = 1e-13
Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 37/194 (19%)
Query: 134 LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI 192
L+ F I GM +LH H +L + N ++ + ++++ DFGL + E
Sbjct: 136 LLLFAQQICE-GMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLA--KAVPEGHE- 189
Query: 193 GEHQYYRS-------LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGG 243
YYR + W APE L++ + +DV++F V L+E++
Sbjct: 190 ----YYRVREDGDSPVFWYAPECLKEY----KFYYASDVWSFGVTLYELLTHCDSSQSPP 241
Query: 244 CGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFP 292
E G + L L D C V M++CW RP F
Sbjct: 242 TKFLELIG--IAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFE 299
Query: 293 TIRARLKHMKDGKQ 306
+ LK + + Q
Sbjct: 300 NLIPILKTVHEKYQ 313
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 70.0 bits (172), Expect = 1e-13
Identities = 43/214 (20%), Positives = 80/214 (37%), Gaps = 68/214 (31%)
Query: 128 IIIITYLMNFGD-----------------GIPRQ---GMTFL------HRSPIGCHGNLK 161
+++ + G + Q GM +L HR +L
Sbjct: 92 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR-------DLA 144
Query: 162 SSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-------WKAPELLRDTHA 214
+ N ++ ++ +++DFGL + +++ YY++ W APE +
Sbjct: 145 ARNVLLVTQHYAKISDFGLS--KALRADEN-----YYKAQTHGKWPVKWYAPECINYY-- 195
Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
+ + K+DV++F V++ E G++ P+ G E KGE P
Sbjct: 196 --KFSSKSDVWSFGVLMWEAFSYGQK-PYRGMKGSEVTAMLEKGERMGCP---------A 243
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
C + M CW E+RP F + RL++
Sbjct: 244 GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 69.5 bits (171), Expect = 1e-13
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 48/176 (27%)
Query: 145 GMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYY 198
GM F+ HR +L+++N +V+ ++ DFGL L I +++Y
Sbjct: 121 GMAFIEERNYIHR-------DLRAANILVSDTLSCKIADFGLARL--------IEDNEYT 165
Query: 199 RSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-- 248
W APE + T K+DV++F ++L EI+ GR P+ G E
Sbjct: 166 AREGAKFPIKWTAPEAINYG----TFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVI 220
Query: 249 ---PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+G P D+C + MR CW E PE RP F +R+ L+
Sbjct: 221 QNLERGYRMVRP---------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 70.5 bits (173), Expect = 2e-13
Identities = 56/212 (26%), Positives = 81/212 (38%), Gaps = 50/212 (23%)
Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
A RP H+ ++ L++ + R GM +L + C H +L + N +V
Sbjct: 168 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR-GMEYL--ASKKCIHRDLAARNVLV 224
Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
T V+++ DFGL R D YY+ L W APE L D T
Sbjct: 225 TEDNVMKIADFGLA--RDIHHID------YYKKTTNGRLPVKWMAPEALFDR----IYTH 272
Query: 221 KADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSC 269
++DV++F V+L EI G Y P P EL + +C
Sbjct: 273 QSDVWSFGVLLWEIFTL-----GGSPY---------PGVPVEELFKLLKEGHRMDKPSNC 318
Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ MRDCW P RP F + L +
Sbjct: 319 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 71.1 bits (174), Expect = 2e-13
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 42/170 (24%)
Query: 146 MTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS----- 200
F+HR NL + N ++ +R +++DFGL + +DS YY +
Sbjct: 455 KNFVHR-------NLAARNVLLVNRHYAKISDFGLS--KALGADDS-----YYTARSAGK 500
Query: 201 --LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKG 251
L W APE + + + ++DV+++ V + E + G++ P+ E +G
Sbjct: 501 WPLKWYAPECINFR----KFSSRSDVWSYGVTMWEALSYGQK-PYKKMKGPEVMAFIEQG 555
Query: 252 EDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ E P C P + A M DCW E RPDF T+ R++
Sbjct: 556 KRMECP---------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 69.2 bits (170), Expect = 2e-13
Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 40/202 (19%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHEL 183
H + I L+ + I + GM +L H +L + N +V + +++ DFGL
Sbjct: 107 HKERIDHIKLLQYTSQICK-GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLT-- 161
Query: 184 RHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII- 235
+ ++ +++ W APE L ++ + + +DV++F V+L+E+
Sbjct: 162 KVLPQDKE-----FFKVKEPGESPIFWYAPESLTES----KFSVASDVWSFGVVLYELFT 212
Query: 236 -GRRGPFGGCGLYEPKGEDCEEPFR--PNLELLR-----------DSCEPFVLACMRDCW 281
+ G + L+ D C + M +CW
Sbjct: 213 YIEKSKSPPAEFMRMIGN---DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 269
Query: 282 AEAPESRPDFPTIRARLKHMKD 303
RP F + R+ ++D
Sbjct: 270 NNNVNQRPSFRDLALRVDQIRD 291
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 69.6 bits (171), Expect = 2e-13
Identities = 55/212 (25%), Positives = 81/212 (38%), Gaps = 50/212 (23%)
Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
A RP +T+ L++ + R GM +L + C H +L + N +V
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR-GMEYL--ASQKCIHRDLAARNVLV 190
Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
T V+++ DFGL A + I YY+ L W APE L D T
Sbjct: 191 TENNVMKIADFGL------ARD--INNIDYYKKTTNGRLPVKWMAPEALFDR----VYTH 238
Query: 221 KADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSC 269
++DV++F V++ EI G Y P P EL + +C
Sbjct: 239 QSDVWSFGVLMWEIFTL-----GGSPY---------PGIPVEELFKLLKEGHRMDKPANC 284
Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ MRDCW P RP F + L +
Sbjct: 285 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 69.2 bits (170), Expect = 3e-13
Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 51/212 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTS 169
I + L++F + + GM FL + C H ++ + N ++T+
Sbjct: 143 RKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ-GMAFL--ASKNCIHRDVAARNVLLTN 199
Query: 170 RWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQKA 222
V ++ DFGL R + Y + L W APE + D T ++
Sbjct: 200 GHVAKIGDFGLA--RDIMNDS------NYIVKGNARLPVKWMAPESIFDC----VYTVQS 247
Query: 223 DVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSC 269
DV+++ ++L EI G P+ G N + +
Sbjct: 248 DVWSYGILLWEIFSLGLN-PYPG--------------ILVNSKFYKLVKDGYQMAQPAFA 292
Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ + M+ CWA P RP F I + L+
Sbjct: 293 PKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 69.2 bits (170), Expect = 3e-13
Identities = 53/214 (24%), Positives = 77/214 (35%), Gaps = 57/214 (26%)
Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
R ET +S ++ L++F + R GM +L S H +L + N +V
Sbjct: 119 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR-GMDYL--SQKQFIHRDLAARNILV 175
Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
+V ++ DFGL R + Y L W A E L + T
Sbjct: 176 GENYVAKIADFGLS--R---------GQEVYVKKTMGRLPVRWMAIESLNYS----VYTT 220
Query: 221 KADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------D 267
+DV+++ V+L EI+ G P+ G EL
Sbjct: 221 NSDVWSYGVLLWEIVSLGGT-PYCGM---------------TCAELYEKLPQGYRLEKPL 264
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+C+ V MR CW E P RP F I L M
Sbjct: 265 NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 69.3 bits (170), Expect = 3e-13
Identities = 51/193 (26%), Positives = 71/193 (36%), Gaps = 60/193 (31%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
L+ F I GM +L HR +L + NC++ + V DFGL
Sbjct: 139 LVRFMVDIAC-GMEYLSSRNFIHR-------DLAARNCMLAEDMTVCVADFGLSRK---- 186
Query: 188 ENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RG 239
I YYR S L W A E L D T +DV+AF V + EI+ R +
Sbjct: 187 ----IYSGDYYRQGCASKLPVKWLALESLADN----LYTVHSDVWAFGVTMWEIMTRGQT 238
Query: 240 PFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESR 288
P+ G N E+ C V M CW+ P+ R
Sbjct: 239 PYAG---------------IENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQR 283
Query: 289 PDFPTIRARLKHM 301
P F +R L+++
Sbjct: 284 PSFTCLRMELENI 296
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 68.8 bits (169), Expect = 3e-13
Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 69/214 (32%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
+ II L G+ Q + +L HR ++
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR-------DI 142
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHA 214
+ N +V+S +++ DFGL R+ ++ YY++ + W APE +
Sbjct: 143 AARNVLVSSNDCVKLGDFGLS--RYMEDST------YYKASKGKLPIKWMAPESINFR-- 192
Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
R T +DV+ F V + EI+ G + PF G + GE P
Sbjct: 193 --RFTSASDVWMFGVCMWEILMHGVK-PFQGVKNNDVIGRIENGERLPMP---------P 240
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+C P + + M CWA P RP F ++A+L +
Sbjct: 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 69.2 bits (170), Expect = 3e-13
Identities = 51/218 (23%), Positives = 82/218 (37%), Gaps = 63/218 (28%)
Query: 111 AHRPQETLKLRIGIHSDIII-ITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSS 163
+H P L + + + L+ + GM +L HR L +
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA-GMVYLAGLHFVHRD-------LATR 187
Query: 164 NCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPI 216
NC+V V+++ DFG+ R D YYR ++L W PE +
Sbjct: 188 NCLVGQGLVVKIGDFGMS--RDIYSTD------YYRVGGRTMLPIRWMPPESILYR---- 235
Query: 217 RGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-------- 266
+ T ++DV++F V+L EI G++ P+ N E +
Sbjct: 236 KFTTESDVWSFGVVLWEIFTYGKQ-PWYQ---------------LSNTEAIDCITQGREL 279
Query: 267 ---DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+C P V A MR CW P+ R + ARL+ +
Sbjct: 280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 70.3 bits (172), Expect = 3e-13
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 71/222 (31%)
Query: 122 IGIHSD--IIIITYLMNFGD------------------GIPRQ---GMTFL------HRS 152
IG+ ++ + II L G+ Q + +L HR
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR- 515
Query: 153 PIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAP 206
++ + N +V+S +++ DFGL + + + YY++ + W AP
Sbjct: 516 ------DIAARNVLVSSNDCVKLGDFGL--------SRYMEDSTYYKASKGKLPIKWMAP 561
Query: 207 ELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFR 259
E + R T +DV+ F V + EI+ G + PF G + GE P
Sbjct: 562 ESINFR----RFTSASDVWMFGVCMWEILMHGVK-PFQGVKNNDVIGRIENGERLPMP-- 614
Query: 260 PNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+C P + + M CWA P RP F ++A+L +
Sbjct: 615 -------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 69.3 bits (170), Expect = 3e-13
Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 48/196 (24%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
H D I YL+N+ I + GM +L HR +L + N +V + +++TDF
Sbjct: 110 HKDNIGSQYLLNWCVQIAK-GMNYLEDRRLVHR-------DLAARNVLVKTPQHVKITDF 161
Query: 179 GLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHAPIRGTQKADVYAFAVILH 232
GL + + Y + + W A E + T ++DV+++ V +
Sbjct: 162 GLA--KLLGAEEK-----EYHAEGGKVPIKWMALESILHR----IYTHQSDVWSYGVTVW 210
Query: 233 EII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAP 285
E++ G + P+ G E KGE +P C V M CW
Sbjct: 211 ELMTFGSK-PYDGIPASEISSILEKGERLPQP---------PICTIDVYMIMVKCWMIDA 260
Query: 286 ESRPDFPTIRARLKHM 301
+SRP F + M
Sbjct: 261 DSRPKFRELIIEFSKM 276
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 68.9 bits (169), Expect = 3e-13
Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 40/202 (19%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHEL 183
H + I L+ + I + GM +L H +L + N +V + +++ DFGL
Sbjct: 138 HKERIDHIKLLQYTSQICK-GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLT-- 192
Query: 184 RHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII- 235
+ ++ YY+ W APE L ++ + + +DV++F V+L+E+
Sbjct: 193 KVLPQDKE-----YYKVKEPGESPIFWYAPESLTES----KFSVASDVWSFGVVLYELFT 243
Query: 236 -GRRGPFGGCGLYEPKGEDCEEPFR--PNLELLR-----------DSCEPFVLACMRDCW 281
+ G + L+ D C + M +CW
Sbjct: 244 YIEKSKSPPAEFMRMIGN---DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECW 300
Query: 282 AEAPESRPDFPTIRARLKHMKD 303
RP F + R+ ++D
Sbjct: 301 NNNVNQRPSFRDLALRVDQIRD 322
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 68.8 bits (169), Expect = 4e-13
Identities = 49/193 (25%), Positives = 70/193 (36%), Gaps = 60/193 (31%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
L+ F I GM +L HR +L + NC++ + V DFGL +
Sbjct: 149 LLKFMVDIAL-GMEYLSNRNFLHR-------DLAARNCMLRDDMTVCVADFGLS--KKIY 198
Query: 188 ENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RG 239
D YYR + + W A E L D T K+DV+AF V + EI R
Sbjct: 199 SGD------YYRQGRIAKMPVKWIAIESLADR----VYTSKSDVWAFGVTMWEIATRGMT 248
Query: 240 PFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESR 288
P+ G N E+ + C + M CW P R
Sbjct: 249 PYPG---------------VQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDR 293
Query: 289 PDFPTIRARLKHM 301
P F +R +L+ +
Sbjct: 294 PTFSVLRLQLEKL 306
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 68.4 bits (168), Expect = 4e-13
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 52/190 (27%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
L+ FG + + GM +L HR +L + NC++ ++ ++V DFGL
Sbjct: 130 LIGFGLQVAK-GMKYLASKKFVHR-------DLAARNCMLDEKFTVKVADFGLARD---- 177
Query: 188 ENDSIGEHQYYRSLL---------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--G 236
+ + +YY W A E L+ + T K+DV++F V+L E++ G
Sbjct: 178 ----MYDKEYYSVHNKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRG 229
Query: 237 RRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDF 291
P+ ++ +G +P + C + M CW E RP F
Sbjct: 230 AP-PYPDVNTFDITVYLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSF 279
Query: 292 PTIRARLKHM 301
+ +R+ +
Sbjct: 280 SELVSRISAI 289
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 68.4 bits (168), Expect = 5e-13
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
L++FG + R GM +L HR +L + NC++ + ++V DFGL R
Sbjct: 126 LISFGLQVAR-GMEYLAEQKFVHR-------DLAARNCMLDESFTVKVADFGLA--RDIL 175
Query: 188 ENDSIGEHQYYRSLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGR-RGPFGG 243
+ + Q+ + L W A E L+ R T K+DV++F V+L E++ R P+
Sbjct: 176 DREYYSVQQHRHARLPVKWTALESLQTY----RFTTKSDVWSFGVLLWELLTRGAPPYRH 231
Query: 244 CGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
++ +G +P + C + M+ CW P RP F + +
Sbjct: 232 IDPFDLTHFLAQGRRLPQP---------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEV 282
Query: 299 KHM 301
+ +
Sbjct: 283 EQI 285
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 68.1 bits (167), Expect = 6e-13
Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 53/214 (24%)
Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
+ R + +T L+ + + + GM FL + C H +L + N ++
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK-GMEFL--ASRKCIHRDLAARNILL 181
Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
+ + V+++ DFGL R ++ Y + L W APE + D T
Sbjct: 182 SEKNVVKICDFGLA--RDIYKDP------DYVRKGDARLPLKWMAPETIFDR----VYTI 229
Query: 221 KADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------D 267
++DV++F V+L EI G P+ G + + E R D
Sbjct: 230 QSDVWSFGVLLWEIFSLGAS-PYPGV--------------KIDEEFCRRLKEGTRMRAPD 274
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P + M DCW P RP F + L ++
Sbjct: 275 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 68.0 bits (167), Expect = 6e-13
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 50/199 (25%)
Query: 125 HSDIIIITYLMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDF 178
H ++ L + + +GM +L HR +L + N ++ +R ++++ DF
Sbjct: 114 HQGHFLLGTLSRYAVQVA-EGMGYLESKRFIHR-------DLAARNLLLATRDLVKIGDF 165
Query: 179 GLHELRHCAENDSIGEHQYYRSLL-------WKAPELLRDTHAPIRGTQKADVYAFAVIL 231
GL +R +ND +Y W APE L+ + +D + F V L
Sbjct: 166 GL--MRALPQNDD-----HYVMQEHRKVPFAWCAPESLKTR----TFSHASDTWMFGVTL 214
Query: 232 HEII--GRRGPFGGC------GLYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAE 283
E+ G+ P+ G + +GE P + C + M CWA
Sbjct: 215 WEMFTYGQE-PWIGLNGSQILHKIDKEGERLPRP---------EDCPQDIYNVMVQCWAH 264
Query: 284 APESRPDFPTIRARLKHMK 302
PE RP F +R L +
Sbjct: 265 KPEDRPTFVALRDFLLEAQ 283
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 68.1 bits (167), Expect = 7e-13
Identities = 51/194 (26%), Positives = 76/194 (39%), Gaps = 62/194 (31%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
++ I GM +L HR L + NC+V + +++ DFG+ R
Sbjct: 140 MIQMAGEIAD-GMAYLNANKFVHRD-------LAARNCMVAEDFTVKIGDFGMT--RDIY 189
Query: 188 ENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRR 238
E D YYR LL W +PE L+D T +DV++F V+L EI +
Sbjct: 190 ETD------YYRKGGKGLLPVRWMSPESLKDG----VFTTYSDVWSFGVVLWEIATLAEQ 239
Query: 239 GPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPES 287
P+ G N ++LR D+C + MR CW P+
Sbjct: 240 -PYQG---------------LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKM 283
Query: 288 RPDFPTIRARLKHM 301
RP F I + +K
Sbjct: 284 RPSFLEIISSIKEE 297
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 68.1 bits (167), Expect = 7e-13
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 61/191 (31%)
Query: 145 GMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYY 198
GM +L HR +L + NC+V V+++ DFGL R+ D YY
Sbjct: 186 GMAYLSERKFVHR-------DLATRNCLVGENMVVKIADFGLS--RNIYSAD------YY 230
Query: 199 R----SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEP 249
+ + W PE + R T ++DV+A+ V+L EI G + P+ G
Sbjct: 231 KADGNDAIPIRWMPPESIFYN----RYTTESDVWAYGVVLWEIFSYGLQ-PYYGM----- 280
Query: 250 KGEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
+ E++ ++C + MR CW++ P RP F +I L
Sbjct: 281 ----------AHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 330
Query: 299 KHMKDGKQKNI 309
+ M + + +
Sbjct: 331 QRMCERAEGTV 341
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 67.6 bits (166), Expect = 7e-13
Identities = 48/214 (22%), Positives = 75/214 (35%), Gaps = 69/214 (32%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
II L +G+ Q M +L HR ++
Sbjct: 87 TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR-------DI 139
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHA 214
N +V S +++ DFGL I + YY++ + W +PE +
Sbjct: 140 AVRNILVASPECVKLGDFGLSRY--------IEDEDYYKASVTRLPIKWMSPESINFR-- 189
Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
R T +DV+ FAV + EI+ G++ PF + KG+ +P D
Sbjct: 190 --RFTTASDVWMFAVCMWEILSFGKQ-PFFWLENKDVIGVLEKGDRLPKP---------D 237
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
C P + M CW P RP F + L +
Sbjct: 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 68.2 bits (167), Expect = 7e-13
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
L+ FG + + GM FL HR +L + NC++ ++ ++V DFGL R
Sbjct: 194 LIGFGLQVAK-GMKFLASKKFVHR-------DLAARNCMLDEKFTVKVADFGLA--RDMY 243
Query: 188 ENDSIGEHQYYRSLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFG 242
+ + H + L W A E L+ + T K+DV++F V+L E++ G P+
Sbjct: 244 DKEFDSVHNKTGAKLPVKWMALESLQTQ----KFTTKSDVWSFGVLLWELMTRGAP-PYP 298
Query: 243 GCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRAR 297
++ +G +P + C + M CW E RP F + +R
Sbjct: 299 DVNTFDITVYLLQGRRLLQP---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349
Query: 298 LKHM 301
+ +
Sbjct: 350 ISAI 353
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 68.0 bits (167), Expect = 8e-13
Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 51/179 (28%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYR--- 199
QGM +L + + H +L + N +V ++++DFGL R E D Y
Sbjct: 161 QGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLS--RDVYEED------SYVKRS 210
Query: 200 -SLL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGED 253
+ W A E L D T ++DV++F V+L EI+ G P+ G
Sbjct: 211 QGRIPVKWMAIESLFDH----IYTTQSDVWSFGVLLWEIVTLGGN-PYPG---------- 255
Query: 254 CEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
P L D+C + M CW + P+ RP F I L+ M
Sbjct: 256 -----IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 67.7 bits (166), Expect = 1e-12
Identities = 50/213 (23%), Positives = 78/213 (36%), Gaps = 65/213 (30%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
++IIT M G G+ R GM +L HR +L
Sbjct: 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR-------DL 173
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS-----LLWKAPELLRDTHAP 215
+ N +V S V +V+DFGL R ++ E Y S + W APE +
Sbjct: 174 AARNILVNSNLVCKVSDFGLS--RVLEDDP---EATYTTSGGKIPIRWTAPEAISYR--- 225
Query: 216 IRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRDS 268
+ T +DV++F +++ E++ G R P+ +E G P
Sbjct: 226 -KFTSASDVWSFGIVMWEVMTYGER-PYWELSNHEVMKAINDGFRLPTP---------MD 274
Query: 269 CEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
C + M CW + RP F I + L +
Sbjct: 275 CPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 67.8 bits (166), Expect = 1e-12
Identities = 55/212 (25%), Positives = 80/212 (37%), Gaps = 50/212 (23%)
Query: 111 AHRPQETLKLRIGIHSDIIIITY--LMNFGDGIPRQGMTFLHRSPIGC-HGNLKSSNCVV 167
A RP +T+ L++ + R GM +L + C H +L + N +V
Sbjct: 180 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR-GMEYL--ASQKCIHRDLAARNVLV 236
Query: 168 TSRWVLQVTDFGLHELRHCAENDSIGEHQYYR----SLL---WKAPELLRDTHAPIRGTQ 220
T V+++ DFGL R D YY+ L W APE L D T
Sbjct: 237 TENNVMKIADFGLA--RDINNID------YYKKTTNGRLPVKWMAPEALFDR----VYTH 284
Query: 221 KADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-----------DSC 269
++DV++F V++ EI G Y P P EL + +C
Sbjct: 285 QSDVWSFGVLMWEIFTL-----GGSPY---------PGIPVEELFKLLKEGHRMDKPANC 330
Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ MRDCW P RP F + L +
Sbjct: 331 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 68.2 bits (167), Expect = 1e-12
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 49/198 (24%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
L++F I GM F+ HR +L+++N +V++ V ++ DFGL R
Sbjct: 286 LIDFSAQIAE-GMAFIEQRNYIHR-------DLRAANILVSASLVCKIADFGLA--RV-- 333
Query: 188 ENDSIGEHQYYRSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRG 239
I +++Y W APE + T K+DV++F ++L EI+ GR
Sbjct: 334 ----IEDNEYTAREGAKFPIKWTAPEAINFG----SFTIKSDVWSFGILLMEIVTYGRI- 384
Query: 240 PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
P+ G E +G P ++C + M CW PE RP F I
Sbjct: 385 PYPGMSNPEVIRALERGYRMPRP---------ENCPEELYNIMMRCWKNRPEERPTFEYI 435
Query: 295 RARLKHMKDGKQKNIIDQ 312
++ L + +
Sbjct: 436 QSVLDDFYTATESQYEEI 453
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 66.9 bits (164), Expect = 1e-12
Identities = 57/235 (24%), Positives = 86/235 (36%), Gaps = 74/235 (31%)
Query: 128 IIIITYLMNFGD-------------------GIPRQ---GMTFL------HRSPIGCHGN 159
IIT M +G+ + Q M +L HR +
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR-------D 136
Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL-------WKAPELLRDT 212
L + NC+V +++V DFGL R + Y + W APE L
Sbjct: 137 LAARNCLVGENHLVKVADFGLS--R-------LMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 213 HAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELL 265
+ + K+DV+AF V+L EI G P+ G L + K E P
Sbjct: 188 ----KFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYRMERP-------- 234
Query: 266 RDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQ 320
+ C V MR CW P RP F I + M ++ +I D++ + + K+
Sbjct: 235 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF--QESSISDEVEKELGKR 286
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 67.4 bits (165), Expect = 2e-12
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 53/188 (28%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
L+ F + M +L HR +L + N +V+ V +V+DFGL
Sbjct: 291 LLKFSLDVCE-AMEYLEGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL------- 335
Query: 188 ENDSIGEHQYYRSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRG 239
+ W APE LR+ + + K+DV++F ++L EI GR
Sbjct: 336 -----TKEASSTQDTGKLPVKWTAPEALREK----KFSTKSDVWSFGILLWEIYSFGRV- 385
Query: 240 PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
P+ L + KG + P D C P V M++CW +RP F +
Sbjct: 386 PYPRIPLKDVVPRVEKGYKMDAP---------DGCPPAVYDVMKNCWHLDAATRPTFLQL 436
Query: 295 RARLKHMK 302
R +L+H++
Sbjct: 437 REQLEHIR 444
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 66.2 bits (162), Expect = 3e-12
Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 50/178 (28%)
Query: 145 GMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS--- 200
GM FL C H +L + N +VT V+++ DFGL R + Y
Sbjct: 184 GMEFL--EFKSCVHRDLAARNVLVTHGKVVKICDFGLA--RDIMSDS------NYVVRGN 233
Query: 201 -LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPKGEDC 254
L W APE L + T K+DV+++ ++L EI G P+ G
Sbjct: 234 ARLPVKWMAPESLFEG----IYTIKSDVWSYGILLWEIFSLGVN-PYPGI---------- 278
Query: 255 EEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ + + M+ CWA RP FP + + L
Sbjct: 279 ----PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 65.4 bits (160), Expect = 3e-12
Identities = 34/221 (15%), Positives = 61/221 (27%), Gaps = 66/221 (29%)
Query: 122 IGIHSD---IIIITYLMNFGD------------------GIPRQ---GMTFLHRSPIGC- 156
G+ I++ + FG + +Q M FL
Sbjct: 78 YGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL--EENTLI 135
Query: 157 HGNLKSSNCVVTSRWVLQ--------VTDFGLHELRHCAENDSIGEHQYYRS-LLWKAPE 207
HGN+ + N ++ + ++D G+ + + + W PE
Sbjct: 136 HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT--------VLPKDILQERIPWVPPE 187
Query: 208 LLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRP 260
+ + D ++F L EI G + P P
Sbjct: 188 CIENPK---NLNLATDKWSFGTTLWEICSGGDK-PLSALDSQRKLQFYEDRHQLPAP--- 240
Query: 261 NLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
+ E L + +C P+ RP F I L +
Sbjct: 241 ------KAAELANL--INNCMDYEPDHRPSFRAIIRDLNSL 273
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 64.9 bits (159), Expect = 6e-12
Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 53/187 (28%)
Query: 134 LMNFGDGIPRQGMTFL------HRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCA 187
L+ F + M +L HR +L + N +V+ V +V+DFGL
Sbjct: 119 LLKFSLDVCE-AMEYLEGNNFVHR-------DLAARNVLVSEDNVAKVSDFGL------T 164
Query: 188 ENDSIGEHQYYRSLL------WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRG 239
+ W APE LR+ + + K+DV++F ++L EI GR
Sbjct: 165 KE------ASSTQDTGKLPVKWTAPEALREK----KFSTKSDVWSFGILLWEIYSFGRV- 213
Query: 240 PFGGCGLYE-----PKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTI 294
P+ L + KG + P D C P V M++CW RP F +
Sbjct: 214 PYPRIPLKDVVPRVEKGYKMDAP---------DGCPPAVYEVMKNCWHLDAAMRPSFLQL 264
Query: 295 RARLKHM 301
R +L+H+
Sbjct: 265 REQLEHI 271
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 65.0 bits (159), Expect = 6e-12
Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 54/182 (29%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYR 199
G +L H ++ + NC++T V ++ DFG+ R YYR
Sbjct: 151 CGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRAS------YYR 200
Query: 200 S----LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPK 250
+L W PE + T K D ++F V+L EI G P+
Sbjct: 201 KGGCAMLPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIFSLGYM-PYPS------- 248
Query: 251 GEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
+ N E+L +C V M CW PE RP+F I R++
Sbjct: 249 --------KSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
Query: 300 HM 301
+
Sbjct: 301 YC 302
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 65.1 bits (159), Expect = 9e-12
Identities = 45/214 (21%), Positives = 78/214 (36%), Gaps = 67/214 (31%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
++I+T M G G+ R GM +L HR L
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD-------L 173
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHA 214
+ N ++ S V +V+DFGL R ++ Y + + W +PE +
Sbjct: 174 AARNILINSNLVCKVSDFGLG--RVLEDD----PEAAYTTRGGKIPIRWTSPEAIAYR-- 225
Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
+ T +DV+++ ++L E++ G R P+ + +G P
Sbjct: 226 --KFTSASDVWSYGIVLWEVMSYGER-PYWEMSNQDVIKAVDEGYRLPPP---------M 273
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
C + M DCW + +RP F I + L +
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 64.7 bits (158), Expect = 1e-11
Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 54/182 (29%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYR 199
G +L H ++ + NC++T V ++ DFG+ R YYR
Sbjct: 192 CGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRAG------YYR 241
Query: 200 S----LL---WKAPELLRDTHAPIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYEPK 250
+L W PE + T K D ++F V+L EI G P+
Sbjct: 242 KGGCAMLPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIFSLGYM-PYPS------- 289
Query: 251 GEDCEEPFRPNLELLR-----------DSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
+ N E+L +C V M CW PE RP+F I R++
Sbjct: 290 --------KSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
Query: 300 HM 301
+
Sbjct: 342 YC 343
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 64.2 bits (157), Expect = 1e-11
Identities = 47/214 (21%), Positives = 76/214 (35%), Gaps = 67/214 (31%)
Query: 128 IIIITYLMNFGD------------------GIPRQ---GMTFL------HRSPIGCHGNL 160
+I+T M G G+ R GM +L HR +L
Sbjct: 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHR-------DL 177
Query: 161 KSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRS------LLWKAPELLRDTHA 214
+ N +V S V +V+DFGL R ++ Y + + W APE +
Sbjct: 178 AARNVLVDSNLVCKVSDFGLS--RVLEDD----PDAAYTTTGGKIPIRWTAPEAIAFR-- 229
Query: 215 PIRGTQKADVYAFAVILHEII--GRRGPFGGCGLYE-----PKGEDCEEPFRPNLELLRD 267
+ +DV++F V++ E++ G R P+ + +G P
Sbjct: 230 --TFSSASDVWSFGVVMWEVLAYGER-PYWNMTNRDVISSVEEGYRLPAP---------M 277
Query: 268 SCEPFVLACMRDCWAEAPESRPDFPTIRARLKHM 301
C + M DCW + RP F I + L +
Sbjct: 278 GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 61.0 bits (147), Expect = 4e-10
Identities = 59/391 (15%), Positives = 103/391 (26%), Gaps = 139/391 (35%)
Query: 113 RPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSS--NCVVTSR 170
R Q LKLR + + + G+ +G G K+ V S
Sbjct: 133 RLQPYLKLRQALLE--------LRPAKNVLIDGV-------LGS-G--KTWVALDVCLSY 174
Query: 171 WVLQVTDFGLH--ELRHCAENDSI------------------------------------ 192
V DF + L++C +++
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 193 ----GEHQYYRSLL-----WKAPELLR--DTHAPI----RGTQKADVYAFAVILHEIIGR 237
Y LL + + I R Q D + A H +
Sbjct: 235 RRLLKSKPYENCLLVLLNVQN-AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 238 RGPFGGCGLYEPKGE-------DCEEPFRPNLELLRDSCE--PFVLACMRDCWAEAPESR 288
L + + DC +L R+ P L+ + ES
Sbjct: 294 HSM----TLTPDEVKSLLLKYLDCRPQ-----DLPREVLTTNPRRLSII-------AESI 337
Query: 289 PDFPTIRARLKHMKDGKQKNIID---------------QMMEMMEKQKNIIDQMMEMM-- 331
D KH+ K II+ + + +I ++ ++
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397
Query: 332 -------EKYANNLED--LVNQR----TMEVY----EEKRKTEDL--LHRMLPAPVAS-R 371
N L LV ++ T+ + E K K E+ LHR + V
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI---VDHYN 454
Query: 372 LTRGYGVEPESYDLVTIYFSDIVGFTAMSAE 402
+ + + + + YF +G + E
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485
Score = 37.5 bits (86), Expect = 0.007
Identities = 22/184 (11%), Positives = 49/184 (26%), Gaps = 62/184 (33%)
Query: 194 EHQYYRSLLWKAPELLRDTHAP-------IR-GTQKADVYAFAVILHEIIGRRGPFGGCG 245
+ R L+ ++ + +R + V++ G G G
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN-VLID------GV-LGSG 162
Query: 246 LYEPKGEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFP----TIRARLKHM 301
K + L + + DF ++
Sbjct: 163 ----K-----------------TW--VALDVCLS---YKVQCKMDFKIFWLNLK------ 190
Query: 302 KDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLH 361
N + ++EM++K ID +++N++ R + E R+ L
Sbjct: 191 ----NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK----LRIHSIQAELRRL--LKS 240
Query: 362 RMLP 365
+
Sbjct: 241 KPYE 244
Score = 32.9 bits (74), Expect = 0.24
Identities = 25/194 (12%), Positives = 58/194 (29%), Gaps = 45/194 (23%)
Query: 181 HELRHCAENDSIGEHQY-YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG 239
H H + + GEHQY Y+ +L D + I+
Sbjct: 1 HHHHHHMDFE-TGEHQYQYKDIL---SVFEDAF------VDNFDCKDVQDMPKSIL---- 46
Query: 240 PFGGCGLYEPKGEDCEEPFR-PN--------LELLRDSCEPFVLACMRDCWAEAPESRPD 290
E+ + + L E V + + R +
Sbjct: 47 ----------SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV------LRIN 90
Query: 291 FPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVY 350
+ + + +K + +Q +++ M +Q++ + ++ KY + + +
Sbjct: 91 YKFLMSPIK--TEQRQPSMM---TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL 145
Query: 351 EEKRKTEDLLHRML 364
E + L+ +L
Sbjct: 146 ELRPAKNVLIDGVL 159
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase,
lyase; 2.31A {Synechocystis SP}
Length = 208
Score = 51.4 bits (124), Expect = 8e-08
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 8 GDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VLTYWLVGA 66
G VN R+ES +I IS A V V KG + V+ + + G
Sbjct: 138 GAQVNLTYRIESYTTGGQIFISSTTLEAAG--DRVHVNGNRTVQPKGVKDPVVIWDVAGV 195
Query: 67 TE 68
E
Sbjct: 196 GE 197
Score = 36.4 bits (85), Expect = 0.009
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 386 VTIYFSDIVGFTAMSAESTPLE 407
+TI SD+ GFT+ S P E
Sbjct: 15 ITILTSDLRGFTSTSEGLNPEE 36
Score = 27.5 bits (62), Expect = 5.7
Identities = 10/53 (18%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 81 GLPIKNGDSHAGEIASMSLNLLDAVK--NHKIAHRPQETLKLRIGIHSDIIII 131
G P D A + + + A++ N ++ + L++ IGI++ +++
Sbjct: 72 GAPTSQQD-DALRAVACGVEMQLALREVNQQVTGLGLQPLEMGIGINTGEVVV 123
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa}
Length = 198
Score = 50.6 bits (122), Expect = 1e-07
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 8 GDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VLTYWLVGA 66
G VN ASR+ES E I IS + + + ++G + +KG V Y +V +
Sbjct: 136 GREVNLASRLESASEAGEILISHETYSLIK--DVIMCRDKGQIAVKGFSRPVQIYQVVDS 193
Query: 67 TE 68
Sbjct: 194 RR 195
Score = 36.0 bits (84), Expect = 0.010
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 386 VTIYFSDIVGFTAMSAESTPLE 407
+T++FSDI GFT +S E
Sbjct: 10 LTVFFSDIRGFTELSEELEAEA 31
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology
domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis}
PDB: 1ybu_A*
Length = 184
Score = 49.6 bits (119), Expect = 3e-07
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 6 LFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGK-GEVLTYWLV 64
+ G V+ +R+ + P + +S + + + ERG +KG G L+
Sbjct: 118 VAGVAVHIGARVCALAGPSEVLVSSTVRDIVAGS-RHRFAERGEQELKGVPGRWRLCVLM 176
Query: 65 GATEGAVQGR 74
+ A + R
Sbjct: 177 R--DDATRTR 184
Score = 34.9 bits (81), Expect = 0.022
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 385 LVTIYFSDIVGFTAMSAESTP 405
L TI F+DIVG T +A
Sbjct: 17 LATIMFTDIVGSTQHAAALGD 37
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 50.8 bits (121), Expect = 4e-07
Identities = 15/101 (14%), Positives = 27/101 (26%), Gaps = 11/101 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS-IGEHQYYRSLL 202
+ L + HG+ N + L + D L Y
Sbjct: 205 RLAANLQSKGL-VHGHFTPDNLFIMPDGRLMLGDVSA--LWKVGTRGPASSVPVTYA--- 258
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
E L + A T + + + ++ + PFG
Sbjct: 259 --PREFLNASTATF--THALNAWQLGLSIYRVWCLFLPFGL 295
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 50.4 bits (121), Expect = 4e-07
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 29/165 (17%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSR-WVLQVTDFGLHELRHCAENDSIGEHQYYRSL 201
+G+ FLH R+P H +LK N +T +++ D GL L+ + ++ +
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV-----IGTP 194
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCG----LYEPKGEDCEEP 257
+ APE+ + + + DVYAF + + E+ P+ C +Y +
Sbjct: 195 EFMAPEMYEEKY-----DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA 249
Query: 258 FRPNLE--LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKH 300
+ +++ + C + + R +I+ L H
Sbjct: 250 SFDKVAIPEVKE----II----EGCIRQNKDER---YSIKDLLNH 283
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase;
HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1
PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Length = 219
Score = 48.0 bits (115), Expect = 1e-06
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 8 GDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGE-VLTY 61
G +VN A+R++ P I +S + + +R + +KG E V+T
Sbjct: 159 GPSVNIAARLQEATAPNSIMVSAMVA---QYVPDEEIIKREFLELKGIDEPVMTC 210
Score = 37.2 bits (87), Expect = 0.005
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 377 GVEPESYDL------VTIYFSDIVGFTAMSAESTP 405
G+ P + +TI FSDIVGFT MS
Sbjct: 13 GLVPRGSHMRPEPRLITILFSDIVGFTRMSNALQS 47
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family;
alpha-beta fold, structural genomics, PSI-2, protein
structu initiative; 2.60A {Ruegeria pomeroyi}
Length = 189
Score = 47.7 bits (114), Expect = 1e-06
Identities = 16/72 (22%), Positives = 26/72 (36%)
Query: 4 YCLFGDTVNTASRMESTGEPLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEVLTYWL 63
+FGD VN A+R+E+ EP I +S + G+ +K + W
Sbjct: 110 GDIFGDAVNVAARLEAISEPGAICVSDIVHQITQDRVSEPFTDLGLQKVKNITRPIRVWQ 169
Query: 64 VGATEGAVQGRE 75
Q +
Sbjct: 170 WVPDADRDQSHD 181
Score = 34.9 bits (81), Expect = 0.025
Identities = 4/23 (17%), Positives = 10/23 (43%)
Query: 385 LVTIYFSDIVGFTAMSAESTPLE 407
L I +D+ G++ + +
Sbjct: 7 LCAILAADMAGYSRLMERNETDV 29
Score = 29.2 bits (66), Expect = 1.6
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 87 GDS------HAGEIASMSLNLLDAVKNHKIAHRPQETLKLRIGIHSDIIIITYLMNFGDG 140
GD A +L + A++ + +E ++ RIGI+ I++ FGD
Sbjct: 57 GDGMLARFDTAQAALRCALEIQQAMQQREEDTPRKERIQYRIGINIGDIVLEDGDIFGDA 116
Query: 141 I 141
+
Sbjct: 117 V 117
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 46.0 bits (110), Expect = 1e-05
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----GEHQYY 198
+G+ +LH I H ++KS N ++ +V ++TDFG+ + + + G Y
Sbjct: 150 RGLHYLHTRAI-IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYI 208
Query: 199 RSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEII-GRR 238
PE +G T+K+DVY+F V+L E++ R
Sbjct: 209 ------DPEYFI------KGRLTEKSDVYSFGVVLFEVLCARS 239
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 45.7 bits (109), Expect = 1e-05
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 21/105 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
G+ +LH I H ++K SN +V +++ DFG+ ++ +LL
Sbjct: 149 GIEYLHYQKI-IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD-----------ALLSN 196
Query: 205 --------APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
APE L +T G DV+A V L+ + + PF
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGK-ALDVWAMGVTLYCFVFGQCPF 240
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 45.4 bits (107), Expect = 2e-05
Identities = 30/227 (13%), Positives = 71/227 (31%), Gaps = 57/227 (25%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWV-----------LQVTDFGL-HELRHCAENDS 191
+ +H I HG++K N ++ + ++ L + D G +++ +
Sbjct: 183 YMIEQVHDCEI-IHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTI 241
Query: 192 IGEHQYYRSLLWKAPELLRDTHAPIRG-TQKADVYAFAVILHEIIGRRGPFGGCGLYEPK 250
+ ++ E+L + + + D + A ++ ++ G Y
Sbjct: 242 F--TAKCETSGFQCVEMLSN-----KPWNYQIDYFGVAATVYCML--------FGTYMKV 286
Query: 251 GEDCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
+ E F D W E + ++ D +
Sbjct: 287 KNEGGECKP---------EGLFRRLPHLDMWNE----------FFHVMLNIPDCHHLPSL 327
Query: 311 DQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTE 357
D + + ++K + Y N + L N+ + + E KR +
Sbjct: 328 DLLRQKLKK---------VFQQHYTNKIRALRNRLIVLLLECKRSRK 365
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 45.0 bits (106), Expect = 3e-05
Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 4/97 (4%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
LH + H L+ + V+ R + +T F L + + + A
Sbjct: 226 SLHHYGL-VHTYLRPVDIVLDQRGGVFLTGFEH--LVRDGASAVSPIGRGFAPPETTAER 282
Query: 208 LLR-DTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+L H P T D + + ++ I P
Sbjct: 283 MLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTD 319
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 44.8 bits (106), Expect = 3e-05
Identities = 52/282 (18%), Positives = 95/282 (33%), Gaps = 53/282 (18%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVT-----SRWVLQVTDFGLHELRHCAENDSIGEHQYY 198
G+ LH I H +LK N +++ + ++DFGL + +
Sbjct: 129 SGLAHLHSLNI-VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 199 RSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRG-PFGG---CGLYEPKGE-- 252
+ W APE+L + T D+++ + + +I PFG G
Sbjct: 188 GTEGWIAPEMLSED-CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS 246
Query: 253 -DCEEPFRPNLELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARLKH---MKDGKQK 307
DC P + + R+ + + D P+ R P+ + LKH KQ
Sbjct: 247 LDCLHPEKHEDVIARE----LIEKMIAMD-----PQKR---PSAKHVLKHPFFWSLEKQL 294
Query: 308 NIIDQMMEMMEKQKNIIDQMMEMMEKYANN--------------LEDLVNQRTM---EVY 350
+ + +EK+ + +++ +E+ DL RT V
Sbjct: 295 QFFQDVSDRIEKES-LDGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVR 353
Query: 351 EEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSD 392
+ R + H P + G P+ + YF+
Sbjct: 354 DLLRAMRNKKHHYRELPA--EVRETLGTLPDDF---VCYFTS 390
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 44.3 bits (105), Expect = 5e-05
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
G+ LH + I H +LK SN VV S L++ DFGL R + + + +YYR
Sbjct: 139 GIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYR-- 193
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE++ + D+++ I+ E+I F G
Sbjct: 194 ---APEVILGMGY----KENVDIWSVGCIMGEMIKGGVLFPG 228
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 42.9 bits (102), Expect = 1e-04
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 22/103 (21%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----GEHQYY 198
G+ FLH + H ++KS+N ++ + +++DFGL + G Y
Sbjct: 144 NGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYM 202
Query: 199 RSLLWKAPELLRDTHAPIRG--TQKADVYAFAVILHEII-GRR 238
APE LR G T K+D+Y+F V+L EII G
Sbjct: 203 ------APEALR-------GEITPKSDIYSFGVVLLEIITGLP 232
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 42.9 bits (101), Expect = 1e-04
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
G+ LH + I H +LK SN VV S L++ DFGL R + + + +YYR
Sbjct: 176 GIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTSFMMTPYVVTRYYR-- 230
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE++ + D+++ I+ E++ + F G
Sbjct: 231 ---APEVILGMGY----KENVDIWSVGCIMGEMVRHKILFPG 265
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 43.1 bits (101), Expect = 2e-04
Identities = 49/277 (17%), Positives = 84/277 (30%), Gaps = 87/277 (31%)
Query: 56 GEVLTYWLVGATEG--AVQGRERNQVSGLPIKNGDSHAG--EIASMSLNLLDAVKNHKIA 111
G + LV A Q +E+ LP + + A E + L+ + ++
Sbjct: 14 GSLEHVLLVPTASFFIASQLQEQFNKI-LP-EPTEGFAADDEPTT-PAELVGKFLGY-VS 69
Query: 112 HRPQETLKLRIGIHSDIIIITYLMNFGDGIPRQGMTFLHRSPIGCHGNLKSSNCVVTSRW 171
+ + ++G D ++ L F + +L + I H +
Sbjct: 70 SLVEPS---KVG-QFDQVLNLCLTEFEN-------CYLEGNDI--H-------ALAAK-- 107
Query: 172 VLQVTDFGLHELRHCAENDSIGEHQYYRSL-LWKAPELLRDTHAPIRGTQKADVYAFAVI 230
+LQ D L + + +N Y + + K P + A R + + A+
Sbjct: 108 LLQENDTTLVKTKELIKN-------YITARIMAKRPFDKKSNSALFRAVGEGNAQLVAI- 159
Query: 231 LHEIIGRRGPFGGCG-----------LYE---PKGEDCEEPFRPNL-ELLRD--SCEPF- 272
FGG G LY+ D + L EL+R E
Sbjct: 160 ----------FGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVF 209
Query: 273 -----VLACMRDCWAEAPESRPD----------FPTI 294
+L W E P + PD P I
Sbjct: 210 TQGLNILE-----WLENPSNTPDKDYLLSIPISCPLI 241
Score = 33.1 bits (75), Expect = 0.20
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 46/133 (34%)
Query: 8 GDTVNTASRMESTGE---------PLRIHISPACKAALDKLGGYIVEERGVVCMKGKGEV 58
G T+ A + G P R+ S + AL Y+VE G K G +
Sbjct: 1790 GMTMQVAVPRDELGRSNYGMIAINPGRVAAS-FSQEALQ----YVVERVG----KRTGWL 1840
Query: 59 LTYWLVGATEGA---VQGRERNQ-VSGLPIKNGDSHAGEIASMSLNLLDAVKNHKIAHRP 114
+ E V+ + Q V+ GD A + + N+L+ +K KI
Sbjct: 1841 V--------EIVNYNVENQ---QYVAA-----GDLRALDTVT---NVLNFIKLQKI---- 1877
Query: 115 QETLKLRIGIHSD 127
+ ++L+ + +
Sbjct: 1878 -DIIELQKSLSLE 1889
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 41.9 bits (99), Expect = 2e-04
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
G+ LH + + H +L N ++ + + DF L R + + + ++YR
Sbjct: 146 GLHVLHEAGV-VHRDLHPGNILLADNNDITICDFNLA--REDTADANKTHYVTHRWYR-- 200
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APEL+ T+ D+++ ++ E+ R+ F G
Sbjct: 201 ---APELVMQFK---GFTKLVDMWSAGCVMAEMFNRKALFRG 236
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 41.7 bits (98), Expect = 3e-04
Identities = 33/189 (17%), Positives = 77/189 (40%), Gaps = 20/189 (10%)
Query: 144 QGMTFLH-RSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-------HELRHCAENDSIGEH 195
+ + +H + P H +LK N +++++ +++ DFG + A+ ++ E
Sbjct: 147 RAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 196 QYYR--SLLWKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE 252
+ R + +++ PE++ ++ PI +K D++A IL+ + R+ PF
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPI--GEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG 264
Query: 253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQ 312
P + A ++ PE R + +L+ + + N
Sbjct: 265 KYSIPPHDTQY---TVFHSLIRAMLQ----VNPEERLSIAEVVHQLQEIAAARNVNPKSP 317
Query: 313 MMEMMEKQK 321
+ E++E+
Sbjct: 318 ITELLEQNG 326
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 41.5 bits (98), Expect = 3e-04
Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 37/166 (22%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQ------Y 197
+ LH + H ++K +N + R ++ DFGL E + G +
Sbjct: 168 LALAHLHSQGL-VHLDVKPANIFLGPRGRCKLGDFGL-----LVELGTAGAGEVQEGDPR 221
Query: 198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYEPKGEDCEE 256
Y APELL+ ++ ADV++ + + E+ P GG G + +
Sbjct: 222 YM-----APELLQGSY-----GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPP 271
Query: 257 PFRPNL-ELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARLKH 300
F L LR ++ + D P+ R T A L
Sbjct: 272 EFTAGLSSELRS----VLVMMLEPD-----PKLR---ATAEALLAL 305
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 40.6 bits (95), Expect = 8e-04
Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 25/146 (17%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLW 203
+++LH + + +LK N ++T + ++ D G R + G +
Sbjct: 193 PALSYLHSIGL-VYNDLKPENIMLTEEQL-KLIDLGAVS-RINSFGYLYGTPGFQ----- 244
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
APE++R D+Y L + G + +D +
Sbjct: 245 -APEIVRTGPTV-----ATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYG 298
Query: 264 LLRDSCEPFVLACMRDCWAEAPESRP 289
L + + P R
Sbjct: 299 RL-------LRRAI----DPDPRQRF 313
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 40.0 bits (93), Expect = 0.001
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 15/103 (14%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWKAPE 207
LH + H L+ + V+ R + +T F +R A S S ++ PE
Sbjct: 221 SLHHYGL-VHTYLRPVDIVLDQRGGVFLTGFEH-LVRDGARVVSSV------SRGFEPPE 272
Query: 208 LLRDTHAPIRG-------TQKADVYAFAVILHEIIGRRGPFGG 243
L T D +A ++++ I P
Sbjct: 273 LEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITK 315
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 39.6 bits (93), Expect = 0.001
Identities = 29/184 (15%), Positives = 66/184 (35%), Gaps = 24/184 (13%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-----HELRHCAENDSIGE-HQY 197
+G+ +H H +LK +N ++ + D G + + ++ +
Sbjct: 145 RGLEAIHAKGY-AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 198 YRSLLWKAPELLRD-THAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGE---- 252
++ ++APEL +H I ++ DV++ +L+ ++ GP+
Sbjct: 204 RCTISYRAPELFSVQSHCVI--DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261
Query: 253 -DCEEPFRPNL-ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNII 310
P P L + + M P RP P + ++L+ ++
Sbjct: 262 NQLSIPQSPRHSSALWQ----LLNSMMT----VDPHQRPHIPLLLSQLEALQPPAPGQHT 313
Query: 311 DQMM 314
Q++
Sbjct: 314 TQIL 317
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 38.8 bits (91), Expect = 0.002
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGL----HELRHCAENDSIGEHQYYRSLLWKAPELLRDT 212
H ++K N +V++ + DFG+ + + +++G Y APE ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYM------APERFSES 210
Query: 213 HAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
HA T +AD+YA +L+E + P+ G
Sbjct: 211 HA----TYRADIYALTCVLYECLTGSPPYQG 237
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 38.4 bits (90), Expect = 0.003
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH-------QY 197
G+ ++H + + H +LK SN ++ + L++ DFGL R + ++
Sbjct: 140 GLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGL--ARVADPDHDHTGFLTEYVATRW 196
Query: 198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
YR APE++ ++ T+ D+++ IL E++ R F G
Sbjct: 197 YR-----APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPG 234
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 38.0 bits (89), Expect = 0.004
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 140 GIPRQGMTFLH---RSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS----- 191
G R G+ +LH I H ++K++N ++ + V DFGL +L D+
Sbjct: 139 GSAR-GLAYLHDHCDPKI-IHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHVTTA 194
Query: 192 -IGEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRR 238
G + APE L + ++K DV+ + V+L E+I G+R
Sbjct: 195 VRGTIGHI------APEYLSTGKS----SEKTDVFGYGVMLLELITGQR 233
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 38.0 bits (89), Expect = 0.004
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 16/74 (21%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY------ 197
G+ ++HR+ I H ++K++N ++T VL++ DFGL R + + ++Y
Sbjct: 135 NGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGL--ARAFSLAKNSQPNRYTNRVVT 191
Query: 198 --YRSLLWKAPELL 209
YR PELL
Sbjct: 192 LWYR-----PPELL 200
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 37.6 bits (87), Expect = 0.005
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL--------HELRHCAENDSIGEH 195
+ + FLH + H +LK SN T V++V DFGL E + H
Sbjct: 175 EAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH 233
Query: 196 ------QYYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
+ Y +PE + + + K D+++ +IL E++
Sbjct: 234 TGQVGTKLYM-----SPEQIHGNNY----SHKVDIFSLGLILFELL 270
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 37.3 bits (87), Expect = 0.007
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
G+ ++H + + H +LK N V L++ DFGL RH + + + ++YR
Sbjct: 138 GLKYIHSAGV-VHRDLKPGNLAVNEDCELKILDFGLA--RH--ADAEMTGYVVTRWYR-- 190
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE++ Q D+++ I+ E++ + F G
Sbjct: 191 ---APEVILSWM---HYNQTVDIWSVGCIMAEMLTGKTLFKG 226
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 37.3 bits (87), Expect = 0.007
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
G+ ++H + I H +LK N V L++ DFGL R + + + ++YR
Sbjct: 140 GLRYIHAAGI-IHRDLKPGNLAVNEDCELKILDFGLA--RQ--ADSEMTGYVVTRWYR-- 192
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE++ + R TQ D+++ I+ E+I + F G
Sbjct: 193 ---APEVILNWM---RYTQTVDIWSVGCIMAEMITGKTLFKG 228
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 36.5 bits (85), Expect = 0.013
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEH---QYYRSL 201
G+ ++H + I H +LK SN V L++ DFGL RH A D + + ++YR
Sbjct: 144 GLKYIHSADI-IHRDLKPSNLAVNEDCELKILDFGLA--RHTA--DEMTGYVATRWYR-- 196
Query: 202 LWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE++ + Q D+++ I+ E++ R F G
Sbjct: 197 ---APEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPG 232
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 35.7 bits (83), Expect = 0.020
Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 29/171 (16%)
Query: 144 QGMTFLHRSPIGC----HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQ--- 196
+ HR G H +LK +N + + +++ DFGL R + S +
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA--RILNHDTSFAKTFVGT 179
Query: 197 -YYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCE 255
YY S PE + + +K+D+++ +L+E+ PF E G+ E
Sbjct: 180 PYYMS-----PEQMNR----MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
Query: 256 EPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD------FPTIRARLKH 300
FR D + + RP P I H
Sbjct: 231 GKFRRIPYRYSDELNEIITRMLNLK----DYHRPSVEEILENPLILEHHHH 277
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 35.7 bits (83), Expect = 0.022
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL----HELRHCAENDSIGEHQYYR 199
G+ H I H ++K N ++ S L++ DFG+ E N +G QY+
Sbjct: 122 DGIKHAHDMRI-VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF- 179
Query: 200 SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+PE + + D+Y+ ++L+E++ PF G
Sbjct: 180 -----SPEQAKGEAT----DECTDIYSIGIVLYEMLVGEPPFNG 214
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 35.8 bits (83), Expect = 0.025
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
+LH+ I H +LK N ++ S+ ++++ DFGL + + + +
Sbjct: 151 YLHKHNI-VHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKM--KERLGTAYYI 205
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE+LR + +K DV++ VIL ++ PFGG
Sbjct: 206 APEVLRKKY-----DEKCDVWSIGVILFILLAGYPPFGG 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 35.5 bits (82), Expect = 0.029
Identities = 52/302 (17%), Positives = 101/302 (33%), Gaps = 75/302 (24%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTS-------------RWVLQVTDFGLHELRHCAEND 190
G+ LH I H +LK N +V++ + ++DFGL +
Sbjct: 126 SGVAHLHSLKI-IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC--KKLDSGQ 182
Query: 191 SIGEHQYYR---SLLWKAPELLRDTHAPIRG---TQKADVYAFAVILHEIIGR-RGPFGG 243
S + W+APELL +++ T+ D+++ + + I+ + + PFG
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 244 CGLYEP---KGE-DCEEPFRPNLELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARL 298
E +G +E + L + + D P R PT L
Sbjct: 243 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD-----PLKR---PTAMKVL 294
Query: 299 KH---MKDGKQKNIIDQMMEMMEKQKNIIDQ-MMEMMEKYANN---------------LE 339
+H K+ + ++ + +E + ++ + ++ ++
Sbjct: 295 RHPLFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMD 354
Query: 340 DLVNQRTMEVYEEKRKTEDLL---------HRMLPAPVASRLTRGYGVEPESYDLVTIYF 390
+L R K DLL LP +A + G P+ + YF
Sbjct: 355 NLERYRKY----HSSKLMDLLRALRNKYHHFMDLPEDIAELM----GPVPDGF---YDYF 403
Query: 391 SD 392
+
Sbjct: 404 TK 405
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 34.9 bits (81), Expect = 0.032
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 22/96 (22%)
Query: 157 HGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS--------IGEHQYYRSLLWKAPEL 208
H ++K +N ++++ ++V DFG+ R A++ + IG QY +PE
Sbjct: 139 HRDVKPANIMISATNAVKVMDFGI--ARAIADSGNSVTQTAAVIGTAQYL------SPEQ 190
Query: 209 LRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGG 243
R ++DVY+ +L+E++ G PF G
Sbjct: 191 ARGDSV----DARSDVYSLGCVLYEVLTGEP-PFTG 221
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 34.7 bits (80), Expect = 0.044
Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 25/228 (10%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDS--IGEHQYYRS 200
+ +H I H ++KS N +T +Q+ DFG+ L E IG +
Sbjct: 136 LALKHVHDRKI-LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIG------T 188
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRP 260
+ +PE+ + K+D++A +L+E+ + F + + F P
Sbjct: 189 PYYLSPEICENKPY----NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP 244
Query: 261 NLELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEK 319
V R+ P RP +I L+ K I + +
Sbjct: 245 VSLHYSYDLRSLVSQLFKRN-----PRDRPSVNSI---LEK--GFIAKRIEKFLSPQLIA 294
Query: 320 QKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAP 367
++ + + + Q ++ V ++ T+ +P
Sbjct: 295 EEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQKITKPAAKYGIPLA 342
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 34.6 bits (80), Expect = 0.044
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVV-TSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL 202
+ + + H I H ++K N ++ L++ D+GL E H E+ +
Sbjct: 141 KALDYCHSMGI-MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASR 194
Query: 203 W-KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ K PELL D D+++ +L +I R+ PF
Sbjct: 195 YFKGPELLVDYQ---MYDYSLDMWSLGCMLASMIFRKEPF 231
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 34.6 bits (80), Expect = 0.046
Identities = 31/194 (15%), Positives = 64/194 (32%), Gaps = 39/194 (20%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAENDSIGEHQYYR---- 199
++++H I H +LK N + +++ DFGL + + +
Sbjct: 128 ALSYIHSQGI-IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 200 ------SLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEP---- 249
+ ++ A E+L T +K D+Y+ +I E+I G
Sbjct: 187 LTSAIGTAMYVATEVLDGT--GHYN-EKIDMYSLGIIFFEMI--YPFSTGMERVNILKKL 241
Query: 250 -KGE-DCEEPFRPNL-ELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARLKH--MKD 303
+ F N ++ + + + D P R P R L +
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKK----IIRLLIDHD-----PNKR---PGARTLLNSGWLPV 289
Query: 304 GKQKNIIDQMMEMM 317
Q +I + ++ +
Sbjct: 290 KHQDEVIKEALKSL 303
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 34.6 bits (80), Expect = 0.049
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 19/107 (17%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRW-VLQVTDFGLHELRHCAENDSIGEH-------Q 196
G+ ++H + + H +LK +N + + VL++ DFGL R + S H +
Sbjct: 132 GLKYIHSANV-LHRDLKPANLFINTEDLVLKIGDFGL--ARIMDPHYSHKGHLSEGLVTK 188
Query: 197 YYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+YR +P LL + T+ D++A I E++ + F G
Sbjct: 189 WYR-----SPRLLLSPN---NYTKAIDMWAAGCIFAEMLTGKTLFAG 227
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 34.7 bits (80), Expect = 0.050
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSR---WVLQVTDFGLHELRHCAE--NDSIGEHQYY 198
G+ +LH+ I H ++K N ++ ++ +++ DFGL D +G YY
Sbjct: 157 SGICYLHKHNI-VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGT-AYY 214
Query: 199 RSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE+L+ + +K DV++ VI++ ++ PFGG
Sbjct: 215 -----IAPEVLKKKY-----NEKCDVWSCGVIMYILLCGYPPFGG 249
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 34.2 bits (79), Expect = 0.057
Identities = 19/103 (18%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-HELRHCAE--NDSIGEHQYYRS 200
+ +H + H ++K +N +T+ V+++ D GL + +G +
Sbjct: 147 SALEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG------T 199
Query: 201 LLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+ +PE + + K+D+++ +L+E+ + PF G
Sbjct: 200 PYYMSPERIHENGY----NFKSDIWSLGCLLYEMAALQSPFYG 238
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 34.3 bits (79), Expect = 0.069
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
++H++ I H +LK N ++ S+ +++ DFGL H + + + +
Sbjct: 141 YMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKM--KDKIGTAYYI 195
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE+L T+ +K DV++ VIL+ ++ PF G
Sbjct: 196 APEVLHGTY-----DEKCDVWSTGVILYILLSGCPPFNG 229
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 33.8 bits (78), Expect = 0.088
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 25/113 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQ-------- 196
+ LH S + H +LK SN ++ S L+V DFGL R E+ +
Sbjct: 124 AVKVLHGSNV-IHRDLKPSNLLINSNCDLKVCDFGL--ARIIDESAADNSEPTGQQSGMV 180
Query: 197 ------YYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
+YR APE++ + + ++ DV++ IL E+ RR F G
Sbjct: 181 EFVATRWYR-----APEVMLTSA---KYSRAMDVWSCGCILAELFLRRPIFPG 225
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 33.8 bits (78), Expect = 0.090
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 24/107 (22%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----GEHQYYR 199
G+ +LH I H ++K N ++T+ L+++ G+ E H D G +
Sbjct: 121 GLEYLHSQGI-VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF-- 177
Query: 200 SLLWKAPELLRDTHAPIRGTQ-----KADVYAFAVILHEIIGRRGPF 241
+ PE+ G K D+++ V L+ I PF
Sbjct: 178 ----QPPEI-------ANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 32.0 bits (73), Expect = 0.34
Identities = 37/219 (16%), Positives = 77/219 (35%), Gaps = 62/219 (28%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDS--------IGEH 195
+G++ LH+ + H ++K N ++T +++ DFG+ A+ D IG
Sbjct: 140 RGLSHLHQHKV-IHRDIKGQNVLLTENAEVKLVDFGV-----SAQLDRTVGRRNTFIG-- 191
Query: 196 QYYRSLLWKAPELLRDTHAPIRG-TQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDC 254
+ W APE++ P K+D+++ + E+ P
Sbjct: 192 ----TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD----------- 236
Query: 255 EEPFR----------PNLE------LLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARL 298
P R P L+ + F+ +C+ + R P +
Sbjct: 237 MHPMRALFLIPRNPAPRLKSKKWSKKFQS----FIESCLV----KNHSQR---PATEQLM 285
Query: 299 KH---MKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKY 334
KH ++ + Q+ + +++ K + E +Y
Sbjct: 286 KHPFIRDQPNERQVRIQLKDHIDRTKKKRGEKDETEYEY 324
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 31.8 bits (73), Expect = 0.36
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL 180
+G+ FLH + I H +LK N +VTS +++ DFGL
Sbjct: 131 RGLDFLHANCI-VHRDLKPENILVTSGGTVKLADFGL 166
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 31.5 bits (72), Expect = 0.38
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 22/112 (19%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQ------Y 197
+G+ ++H + + +LK SN + +++ DFGL + G+
Sbjct: 133 KGVDYIHSKKL-INRDLKPSNIFLVDTKQVKIGDFGL-----VTSLKNDGKRTRSKGTLR 186
Query: 198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII-GRRGPFGGCGLYE 248
Y S PE + ++ D+YA +IL E++ F +
Sbjct: 187 YMS-----PEQISSQDY----GKEVDLYALGLILAELLHVCDTAFETSKFFT 229
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 31.4 bits (72), Expect = 0.44
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL 180
+G+ FLH + H +LK N +VTS +++ DFGL
Sbjct: 131 RGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGL 166
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 31.2 bits (71), Expect = 0.51
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 24/106 (22%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL--------HELRHCAENDSIGEH 195
+ + FLH + H +LK SN T V++V DFGL E + H
Sbjct: 129 EAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 196 Q------YYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEII 235
Y S PE + + K D+++ +IL E++
Sbjct: 188 TGQVGTKLYMS-----PEQIHGNSY----SHKVDIFSLGLILFELL 224
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 31.3 bits (72), Expect = 0.55
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 20/74 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY------ 197
G+ + H + H +LK N ++ L++ DFGL A I +Y
Sbjct: 111 NGIAYCHDRRV-LHRDLKPQNLLINREGELKIADFGL------ARAFGIPVRKYTHEIVT 163
Query: 198 --YRSLLWKAPELL 209
YR AP++L
Sbjct: 164 LWYR-----APDVL 172
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 31.6 bits (72), Expect = 0.55
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 148 FLHRSPIGCHGNLKSSNCVVTSRW---VLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
++H+ I H +LK N ++ S+ +++ DFGL +N + + +
Sbjct: 136 YMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKM--KDRIGTAYYI 190
Query: 205 APELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
APE+LR T+ +K DV++ VIL+ ++ PF G
Sbjct: 191 APEVLRGTY-----DEKCDVWSAGVILYILLSGTPPFYG 224
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 31.0 bits (71), Expect = 0.58
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY------ 197
+G+ + HR + H +LK N ++ R L++ DFGL A SI Y
Sbjct: 111 RGLAYCHRQKV-LHRDLKPQNLLINERGELKLADFGL------ARAKSIPTKTYDNEVVT 163
Query: 198 --YRSLLWKAPELL 209
YR P++L
Sbjct: 164 LWYR-----PPDIL 172
>1rr7_A Middle operon regulator; MOR, transcription; 2.20A {Enterobacteria
phage MU} SCOP: a.4.1.14
Length = 129
Score = 29.9 bits (67), Expect = 0.61
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 204 KAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLE 263
+ P LL + + +RG A L ++ GG +Y P+G+ + R +L
Sbjct: 27 RFPALLAELNDLLRGELSRLGVDPAHSLEIVVAICKHLGGGQVYIPRGQALDSLIR-DLR 85
Query: 264 LLRD 267
+ D
Sbjct: 86 IWND 89
>2iub_A CORA, divalent cation transport-related protein; membrane protein,
ION transporter; 2.9A {Thermotoga maritima} SCOP:
d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Length = 363
Score = 31.2 bits (71), Expect = 0.64
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 33/127 (25%)
Query: 286 ESRPDFPTIRARLKHMKDGKQKN--------IIDQMMEMMEKQKNIIDQMMEMMEKYANN 337
+ F +R R+++ + +K +ID ++D ++EK +
Sbjct: 154 KIGDVFDPVRERIRYNRGIIRKKRADYLLYSLIDA----------LVDDYFVLLEKIDDE 203
Query: 338 LEDL--------VNQRTMEVYEEKRKTEDLLHRMLP-APVASRLTRGYG--VEPESYDLV 386
++ L + ++ KR +L + P V S L R +E E
Sbjct: 204 IDVLEEEVLERPEKETVQRTHQLKRNLVELRKTIWPLREVLSSLYRDVPPLIEKE----T 259
Query: 387 TIYFSDI 393
YF D+
Sbjct: 260 VPYFRDV 266
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA
GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo
sapiens} PDB: 3odo_A
Length = 377
Score = 31.0 bits (70), Expect = 0.75
Identities = 9/78 (11%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 294 IRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEK 353
+++ ++ ++ ++ ++ E + + ++Q + ME L+D QR +++ +
Sbjct: 183 LQSIGQNTEEPTEREKVELAAECCREILHHVNQAVRDMEDL-LRLKDY--QRRLDLSHLR 239
Query: 354 RKTEDLLHRMLPAPVASR 371
+ ++ +L + +
Sbjct: 240 QSSDPMLSEFKNLDITKK 257
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 30.6 bits (70), Expect = 0.77
Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
+ + H + H ++K N ++ + L++ DFG S+ +L +
Sbjct: 126 ALHYCHERKV-IHRDIKPENLLMGYKGELKIADFGW-----SVHAPSLRRRTMCGTLDYL 179
Query: 205 APELLRDTHAPIRG-TQKADVYAFAVILHEIIGRRGPF 241
PE++ + +K D++ V+ +E + PF
Sbjct: 180 PPEMIEG-----KTHDEKVDLWCAGVLCYEFLVGMPPF 212
>2bbh_A Divalent cation transport-related protein; transporter, Mg,
membrane, structural genomics, structural G consortium,
SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP:
d.328.1.1
Length = 269
Score = 30.8 bits (70), Expect = 0.78
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 33/124 (26%)
Query: 289 PDFPTIRARLKHMKDGKQKN--------IIDQMMEMMEKQKNIIDQMMEMMEKYANNLED 340
F +R R+++ + +K +ID ++D ++EK + ++
Sbjct: 148 DVFDPVRERIRYNRGIIRKKRADYLLYSLIDA----------LVDDYFVLLEKIDDEIDV 197
Query: 341 L-------VNQRTME-VYEEKRKTEDLLHRMLP-APVASRLTRGYG--VEPESYDLVTIY 389
L + T++ ++ KR +L + P V S L R +E E Y
Sbjct: 198 LEEEVLERPEKETVQRTHQLKRNLVELRKTIWPLREVLSSLYRDVPPLIEKE----TVPY 253
Query: 390 FSDI 393
F D+
Sbjct: 254 FRDV 257
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 30.6 bits (70), Expect = 0.80
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 20/74 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY------ 197
+G+ H+ I H +LK N ++ S L++ DFGL A I Y
Sbjct: 130 RGVAHCHQHRI-LHRDLKPQNLLINSDGALKLADFGL------ARAFGIPVRSYTHEVVT 182
Query: 198 --YRSLLWKAPELL 209
YR AP++L
Sbjct: 183 LWYR-----APDVL 191
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.1 bits (67), Expect = 0.83
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 19/77 (24%)
Query: 282 AEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDL 341
+ PES IR + +Q+ + ++ + + E EK +LE+
Sbjct: 81 TQEPES------IRKWRE-----EQRKRLQELDAASKVMEQ------EWREKAKKDLEEW 123
Query: 342 VNQRTMEVYEEKRKTED 358
+++ +V EK K +
Sbjct: 124 NQRQSEQV--EKNKINN 138
Score = 29.7 bits (66), Expect = 1.4
Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 35/93 (37%)
Query: 270 EPFVLACMRDCWAEAPESRPDFPTIRAR-------LKHMKDGKQKNIIDQMM---EMMEK 319
EP +R W E R ++ + ++ +K++ + E +EK
Sbjct: 83 EP---ESIRK-WREEQRKR-----LQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEK 133
Query: 320 QKNIIDQMMEMMEKYANNL---EDLVNQRTMEV 349
K NN + Q ++
Sbjct: 134 NK-------------INNRIADKAFYQQPDADI 153
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 30.6 bits (70), Expect = 0.96
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 20/74 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY------ 197
QG+ F H + H +LK N ++ + +++ DFGL A + Y
Sbjct: 114 QGLAFCHSHRV-LHRDLKPQNLLINTEGAIKLADFGL------ARAFGVPVRTYTHEVVT 166
Query: 198 --YRSLLWKAPELL 209
YR APE+L
Sbjct: 167 LWYR-----APEIL 175
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA
GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo
sapiens} PDB: 3odx_A
Length = 536
Score = 30.8 bits (69), Expect = 0.96
Identities = 9/75 (12%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 298 LKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTE 357
++ ++ ++ ++ E + + ++Q + ME L+D QR +++ ++ ++
Sbjct: 340 GQNTEEPTEREKVELAAECCREILHHVNQAVRDMED-LLRLKDY--QRRLDLSHLRQSSD 396
Query: 358 DLLHRMLPAPVASRL 372
+L + +
Sbjct: 397 PMLSEFKNLDITKKK 411
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.5 bits (65), Expect = 1.00
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 9/35 (25%)
Query: 318 EKQKNIIDQMMEMMEKYANNLED----LVNQRTME 348
EKQ + ++ ++ YA +D L + TME
Sbjct: 18 EKQA--LKKLQASLKLYA---DDSAPALAIKATME 47
Score = 29.5 bits (65), Expect = 1.3
Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 12/41 (29%)
Query: 259 RPNLELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLK 299
+ L+ L+ S + + A +S P I+A ++
Sbjct: 19 KQALKKLQASLKLY-----------ADDSAPAL-AIKATME 47
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 30.2 bits (69), Expect = 1.0
Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 29/109 (26%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY------ 197
+G+ F H + H +LK N ++ L++ +FGL A I Y
Sbjct: 112 KGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGL------ARAFGIPVRCYSAEVVT 164
Query: 198 --YRSLLWKAPELL---RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
YR P++L + I D+++ I E+ P
Sbjct: 165 LWYR-----PPDVLFGAKLYSTSI------DMWSAGCIFAELANAGRPL 202
>1q1f_A Neuroglobin; globin fold, heme protein, oxygen storage/transport
complex; HET: HEM; 1.50A {Mus musculus} SCOP: a.1.1.2
PDB: 1w92_A* 3gk9_A* 2vry_A* 3gkt_A* 3gln_A* 1oj6_A*
Length = 151
Score = 29.4 bits (66), Expect = 1.1
Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 34/108 (31%)
Query: 282 AEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDL 341
A P P F ++ + + + I ++M +++ N+EDL
Sbjct: 33 ALEPSLLPLFQY----------NGRQFSSPEDSLSSPEFLDHIRKVMLVIDAAVTNVEDL 82
Query: 342 VNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTR---GYGVEPESYDLV 386
L + L R GV S+ V
Sbjct: 83 ---------------SSL------EEYLTSLGRKHRAVGVRLSSFSTV 109
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 30.1 bits (68), Expect = 1.2
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 143 RQ---GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGE--HQY 197
RQ + +L I H ++K N V+ + +++ DFG A G+ + +
Sbjct: 137 RQLVSAVGYLRLKDI-IHRDIKDENIVIAEDFTIKLIDFGS------AAYLERGKLFYTF 189
Query: 198 YRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
++ + APE+L P RG + ++++ V L+ ++ PF
Sbjct: 190 CGTIEYCAPEVLMGN--PYRGP-ELEMWSLGVTLYTLVFEENPF 230
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 29.9 bits (68), Expect = 1.2
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLLWK 204
+++ H + H ++K N ++ S L++ DFG S +L +
Sbjct: 121 ALSYCHSKRV-IHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTDLCGTLDYL 174
Query: 205 APELLRDTHAPIRG-TQKADVYAFAVILHEIIGRRGPF 241
PE++ R +K D+++ V+ +E + + PF
Sbjct: 175 PPEMIEG-----RMHDEKVDLWSLGVLCYEFLVGKPPF 207
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse,
BAR domain, endocytosis; 2.60A {Mus musculus} PDB:
3qe6_A
Length = 320
Score = 30.2 bits (67), Expect = 1.3
Identities = 5/62 (8%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 295 RARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKR 354
R ++M+D + + ++ + +++ +L+ + + E++ + +
Sbjct: 215 RYTPRYMED--MEQAFESCQAAERQR---LLFFKDVLLTLHQHLDLSSSDKFHELHRDLQ 269
Query: 355 KT 356
++
Sbjct: 270 QS 271
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 30.3 bits (68), Expect = 1.3
Identities = 15/95 (15%), Positives = 37/95 (38%), Gaps = 21/95 (22%)
Query: 144 QGMTFLHRSPIGC-HGNLKSSNCVVTSRWVLQVTDFGL----------HELRHCAENDSI 192
+ + ++H G H ++K+S+ +++ + ++ + H S+
Sbjct: 139 KALDYIHHM--GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 196
Query: 193 GEHQYYRSLLWKAPELLRDTHAPIRGTQKADVYAF 227
L W +PE+L+ K+D+Y+
Sbjct: 197 K------VLPWLSPEVLQQNLQGY--DAKSDIYSV 223
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 30.2 bits (68), Expect = 1.4
Identities = 18/79 (22%), Positives = 23/79 (29%), Gaps = 35/79 (44%)
Query: 190 DSIG-----EHQYYRSLLWKAPELL-------RDTHAPIRGTQKADVYAFAVIL-----H 232
+ I H R +L ++ R Q VIL H
Sbjct: 583 EHIDSKSEFAH---RIMLTNILRMMGCVKKQKSARGIETRPAQ--------VILPMSPNH 631
Query: 233 EIIGRRGPFGGCGLY-EPK 250
G FGG G+Y E K
Sbjct: 632 ------GTFGGDGMYSESK 644
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 29.9 bits (68), Expect = 1.5
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 20/74 (27%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQY------ 197
QG+ F H + I H +LK N ++ R L++ DFGL A I + +
Sbjct: 119 QGLAFCHENKI-LHRDLKPQNLLINKRGQLKLGDFGL------ARAFGIPVNTFSSEVVT 171
Query: 198 --YRSLLWKAPELL 209
YR AP++L
Sbjct: 172 LWYR-----APDVL 180
>2igi_A Oligoribonuclease; RNAse, exoribonuclease, exonuclease, hydrolase,
mRNA decay; 1.70A {Escherichia coli} SCOP: c.55.3.5 PDB:
1yta_A 1j9a_A
Length = 180
Score = 29.4 bits (65), Expect = 1.6
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 162 SSNCVVTSRWVLQVTDFGLHELRHCAEND---SIGEHQYYRSLLWK 204
S+ + RW ++ D + H A +D S+ E YYR K
Sbjct: 134 STLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 179
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 29.6 bits (67), Expect = 1.7
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 28/107 (26%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-------HELR-HCAENDSIGEHQ 196
+ + H+ I H +LK+ N ++ + +++ DFG +L C
Sbjct: 126 AVQYCHQKRI-VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG--------- 175
Query: 197 YYRSLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ + APEL + P + DV++ VIL+ ++ PF
Sbjct: 176 ---APPYAAPELFQGKKYDGP-----EVDVWSLGVILYTLVSGSLPF 214
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH),
beta sandwich (PH), signaling protein; 2.13A {Homo
sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Length = 385
Score = 29.8 bits (67), Expect = 1.7
Identities = 10/77 (12%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 294 IRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEK------YANNLEDLVNQRTM 347
+ K+ + ++ + + + + N ++Q ++ E Y L+ + +
Sbjct: 181 LDNIAKYTEWPTEREKVKKAADHCRQILNFVNQAVKEAENKQRLEDYQRRLDTSSLKLSE 240
Query: 348 EVYEEKRKTEDLLHRML 364
E+ + DL R +
Sbjct: 241 YPNVEELRNLDLTKRKM 257
>2o0m_A Transcriptional regulator, SORC family; structural genomics,
protein structure initiative, midwest center for
structural genomics, MCSG; 1.60A {Enterococcus faecalis}
SCOP: c.124.1.8
Length = 345
Score = 29.5 bits (66), Expect = 1.9
Identities = 2/21 (9%), Positives = 13/21 (61%)
Query: 313 MMEMMEKQKNIIDQMMEMMEK 333
M++ + + + M++++++
Sbjct: 1 MLKEFKMIEAVAPDMLDVLQE 21
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90,
transferase-transferase inhibitor; HET: SFG; 1.80A {Mus
musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A*
3tg4_A* 3tg5_A* 3rib_A*
Length = 433
Score = 29.8 bits (66), Expect = 1.9
Identities = 25/188 (13%), Positives = 44/188 (23%), Gaps = 19/188 (10%)
Query: 221 KADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNLELLR-DSCEPFVLACMRD 279
+ ++ + +G CE F L + C C +
Sbjct: 24 LRPFHVGDLLFSCP-----AYACVLTVGERGHHCECCFARKEGLSKCGRC-KQAFYCDVE 77
Query: 280 CWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLE 339
C E + L + + + E
Sbjct: 78 CQKEDWPLHKLECSSMVVLGEN-----------WNPSETVRLTARILAKQKIHPERTPSE 126
Query: 340 DLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTRGYGVEPESYDLVTIYFSDIV-GFTA 398
L+ R E + +K E + Y P+ LV ++ GFT
Sbjct: 127 KLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKYLEFPDHSSLVVLFAQVNCNGFTI 186
Query: 399 MSAESTPL 406
E + L
Sbjct: 187 EDEELSHL 194
>3tr8_A Oligoribonuclease; transcription, hydrolase; 2.50A {Coxiella
burnetii}
Length = 186
Score = 28.7 bits (63), Expect = 2.3
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 162 SSNCVVTSRWVLQVTDFGLHELRHCAEND---SIGEHQYYRSLLWKAPE 207
++ ++ RW Q+ + E +H A D SI E +YYR+ L +
Sbjct: 138 TTLKILAQRWAPQIAAAHIKESQHLALQDIRDSIEELRYYRAHLLNLSK 186
>2gbz_A Oligoribonuclease; ORN, deddh, structural genomics, hydrolase;
2.30A {Xanthomonas campestris PV}
Length = 194
Score = 28.7 bits (63), Expect = 2.4
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 162 SSNCVVTSRWVLQVTDFGLHELRHCAEND---SIGEHQYYRSLLWKAPE 207
S+ + RW V H A +D SI E ++YR +
Sbjct: 138 STIKELARRWAPAVASGFAKSSAHTALSDVRDSIDELRHYRQFMGTLGG 186
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 29.0 bits (65), Expect = 2.6
Identities = 39/218 (17%), Positives = 80/218 (36%), Gaps = 37/218 (16%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLH-ELRHCAENDSIGEHQYYRSLL 202
+G+T+L H ++K SN +V SR +++ DFG+ +L N +G +
Sbjct: 142 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG------TRS 195
Query: 203 WKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGGCGLYEPKGEDCEEPFRPNL 262
+ +PE L+ TH + ++D+++ + L E+ R P E +
Sbjct: 196 YMSPERLQGTHY----SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM---------- 241
Query: 263 ELLRDSCEPFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKN 322
C + A RP P M I + + ++ +
Sbjct: 242 -----------FGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP 290
Query: 323 IIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLL 360
+ ++ +D VN+ ++ E+ + L+
Sbjct: 291 KLPS-----GVFSLEFQDFVNKCLIKNPAERADLKQLM 323
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative
splicing, coiled coil, cytoplasmic vesicle, endocytosis,
phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Length = 486
Score = 29.0 bits (63), Expect = 2.9
Identities = 6/52 (11%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 305 KQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKT 356
+ + +Q + EK+ + E++ + +L+ +Y + ++
Sbjct: 225 NMEQVFEQCQQFEEKR---LRFFREVLLEVQKHLDLSNVAGYKAIYHDLEQS 273
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 28.7 bits (65), Expect = 2.9
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 28/108 (25%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-------HELRH--CAENDSIGE 194
GM +LH I H +L SN ++T +++ DFGL HE + C G
Sbjct: 123 TGMLYLHSHGI-LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC------G- 174
Query: 195 HQYYRSLLWKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ + +PE+ R H ++DV++ + + ++ R PF
Sbjct: 175 -----TPNYISPEIATRSAHGL-----ESDVWSLGCMFYTLLIGRPPF 212
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 28.7 bits (65), Expect = 3.3
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 28/107 (26%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-------HELRH--CAENDSIGEH 195
G +LHR+ + H +LK N + +++ DFGL E + C G
Sbjct: 127 GCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC------G-- 177
Query: 196 QYYRSLLWKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ + APE+L + H+ + DV++ I++ ++ + PF
Sbjct: 178 ----TPNYIAPEVLSKKGHSF-----EVDVWSIGCIMYTLLVGKPPF 215
>1kmi_Z CHEZ, chemotaxis protein CHEZ; four-helix bundle, signaling
protein; HET: BCN; 2.90A {Escherichia coli} SCOP:
h.4.11.1
Length = 214
Score = 28.6 bits (63), Expect = 3.4
Identities = 17/118 (14%), Positives = 38/118 (32%), Gaps = 14/118 (11%)
Query: 282 AEAPESRPDFPTIRARLKHMKDGKQ--KNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLE 339
A + A + D ++ + + ++ Q++++M A + +
Sbjct: 85 KSAKALTQRWDDWFADPIDLADARELVTDTRQFLADVPAHTSFTNAQLLKIMM--AQDFQ 142
Query: 340 DLVNQRTMEVYEEKRKTEDLLHRML----------PAPVASRLTRGYGVEPESYDLVT 387
DL Q + + ++ E L +L P L G V+ +V
Sbjct: 143 DLTGQVIKRMMDVIQEIERQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVA 200
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons
protein 2; helix bundle, coiled-coil, endocytosis; 2.70A
{Homo sapiens}
Length = 350
Score = 28.7 bits (63), Expect = 3.5
Identities = 7/62 (11%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 295 RARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKR 354
+ ++M++ + + +Q + EK+ + E++ + +L+ +Y +
Sbjct: 224 QGTPQYMEN--MEQVFEQCQQFEEKR---LRFFREVLLEVQKHLDLSNVAGYKAIYHDLE 278
Query: 355 KT 356
++
Sbjct: 279 QS 280
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil,
coiled coil, cytoplasm, disease mutation, ectodermal
dysplasia; 3.20A {Homo sapiens}
Length = 130
Score = 27.9 bits (61), Expect = 3.5
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Query: 282 AEAPESRPDFPTIRARLKHMKDGKQ--KNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLE 339
E ES+ + ++ + Q+ E + ++ + ++E
Sbjct: 9 GELQESQSRLEAATKECQALEGRARAASEQARQLESEREALQQQHSVQVDQLRMQGQSVE 68
Query: 340 DLVNQRTMEVYEEKRKTEDLLHR 362
+ EEKRK L
Sbjct: 69 AALRMERQAASEEKRKLAQLQVA 91
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 28.9 bits (65), Expect = 3.6
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 38/118 (32%)
Query: 149 LHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-------------HELRHCAENDSIGEH 195
LHR ++K SN ++ + ++V DFGL L ++ +
Sbjct: 131 LHR-------DMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 196 Q----------YYRSLLWKAPELLRDTHAPIRGTQKADVYAFAVILHEIIGRRGPFGG 243
Q +YR APE+L + + T+ D+++ IL EI+ + F G
Sbjct: 184 QPILTDYVATRWYR-----APEILLGST---KYTKGIDMWSLGCILGEILCGKPIFPG 233
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 28.5 bits (64), Expect = 3.9
Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 29/192 (15%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAE-NDSIGEHQYYRSLL 202
+ + +L H ++K SN ++ R +++ DFG+ D + +
Sbjct: 135 KALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI-----SGRLVDDKAKDRSAGCAA 189
Query: 203 WKAPELLRDTHAPIRG-TQKADVYAFAVILHEIIGRRGPFGGCG------LYEPKGEDCE 255
+ APE + +ADV++ + L E+ + P+ C + E
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE---E 246
Query: 256 EPFRPNLELLRDSCEPFVLACM-RDCWAEAPESRPDFPTIRARLKH----MKDGKQKNII 310
P P + FV C+ +D R P L+H + + ++
Sbjct: 247 PPLLPGHMGFSGDFQSFVKDCLTKD-----HRKR---PKYNKLLEHSFIKRYETLEVDVA 298
Query: 311 DQMMEMMEKQKN 322
++M K ++
Sbjct: 299 SWFKDVMAKTES 310
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 28.8 bits (65), Expect = 4.1
Identities = 3/37 (8%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
Query: 299 KHMKDGKQKNIIDQMMEMMEKQK----NIIDQMMEMM 331
++ Q+ D + ++ ++ + + E+
Sbjct: 256 NRLQRYSQQPGADFLCDIYQQDHLSKKELYAAVTELQ 292
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP
hydrolysis, GDP, GMP, dynamin related, large GTPase
family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens}
SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A*
2bc9_A* 2d4h_A*
Length = 592
Score = 28.8 bits (63), Expect = 4.5
Identities = 10/64 (15%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 305 KQKNIIDQMMEMMEKQKNIIDQM----MEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLL 360
K+ + E + ++ +M +MME+ + ++ + Q T ++ ++ +
Sbjct: 487 KEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQ 546
Query: 361 HRML 364
R L
Sbjct: 547 ERTL 550
>3t97_B Nuclear pore complex protein NUP54; nucleoporin, coiled-coil,
nuclear pore complex, central TRAN channel, alpha
helical proteins, triple helix; 2.80A {Rattus
norvegicus}
Length = 65
Score = 26.2 bits (57), Expect = 5.1
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 315 EMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKTEDLLHRMLPAPVASRLTR 374
M ++ + +D + E + + N ++ + KRK DL HR L + + R
Sbjct: 3 HMTKQHQTRLDIISEDISELQKNQTTT----MAKIAQYKRKLMDLSHRTLQVLIKQEIQR 58
Query: 375 GYG 377
G
Sbjct: 59 KSG 61
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 28.0 bits (63), Expect = 5.5
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 28/107 (26%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL-------HELRH--CAENDSIGEH 195
G +LHR+ + H +LK N + +++ DFGL E + C G
Sbjct: 153 GCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC------G-- 203
Query: 196 QYYRSLLWKAPELL-RDTHAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+ + APE+L + H+ + DV++ I++ ++ + PF
Sbjct: 204 ----TPNYIAPEVLSKKGHSF-----EVDVWSIGCIMYTLLVGKPPF 241
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 28.0 bits (63), Expect = 5.7
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 15/87 (17%)
Query: 160 LKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL----WKAPELLRDTHAP 215
LK N ++ +Q+TDFG + S + + +PELL +
Sbjct: 156 LKPENILLNEDMHIQITDFGT-----AKVLSPESKQARANSFVGTAQYVSPELLTE---- 206
Query: 216 IRGTQKA-DVYAFAVILHEIIGRRGPF 241
+ K+ D++A I+++++ PF
Sbjct: 207 -KSACKSSDLWALGCIIYQLVAGLPPF 232
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 27.5 bits (62), Expect = 6.6
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 19/104 (18%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSI-----GEHQYYR 199
G+ +LH I H ++K N ++ R L+++DFGL + + + G
Sbjct: 117 GVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG------ 169
Query: 200 SLLWKAPELLRDT--HAPIRGTQKADVYAFAVILHEIIGRRGPF 241
+L + APELL+ HA DV++ ++L ++ P+
Sbjct: 170 TLPYVAPELLKRREFHAE-----PVDVWSCGIVLTAMLAGELPW 208
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons
protein 2; helix bundle, coiled-coil, endocytosis; 2.00A
{Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A
3q84_A
Length = 312
Score = 27.9 bits (61), Expect = 7.2
Identities = 4/45 (8%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 312 QMMEMMEKQKNIIDQMMEMMEKYANNLEDLVNQRTMEVYEEKRKT 356
+ + E+++ + E++ + +L+ +Y + ++
Sbjct: 238 EQCQQFEEKR--LRFFREVLLEVQKHLDLSNVAGYKAIYHDLEQS 280
>1msw_D DNA-directed RNA polymerase, bacteriophage T7 RNA; T7RNAP
elongation complex, transcription/DNA/RNA complex; 2.10A
{Enterobacteria phage T7} SCOP: e.8.1.3 PDB: 1h38_A
1cez_A 1qln_A* 1s0v_A* 1s76_D* 1s77_D* 4rnp_A 3e2e_A*
3e3j_C* 1aro_P 2pi4_A* 2pi5_A
Length = 883
Score = 27.6 bits (59), Expect = 9.1
Identities = 9/82 (10%), Positives = 17/82 (20%)
Query: 271 PFVLACMRDCWAEAPESRPDFPTIRARLKHMKDGKQKNIIDQMMEMMEKQKNIIDQMMEM 330
VLA D P I MK + + + +
Sbjct: 332 KKVLAVANVITKWKHCPVEDIPAIEREELPMKPEDIDMNPEALTAWKRAAAAVYRKDKAR 391
Query: 331 MEKYANNLEDLVNQRTMEVYEE 352
+ + L ++
Sbjct: 392 KSRRISLEFMLEQANKFANHKA 413
>3vjf_A WA20; protein design, de novo protein, binary patterned design, FO
bundle, rudimentary enzymatic activitie; 2.20A
{Synthetic construct}
Length = 102
Score = 26.0 bits (57), Expect = 9.3
Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 300 HMKDGKQKNIIDQMMEMM-------EKQKNIIDQMMEMMEKYANNLEDLVNQ 344
+ DGK +N+I +M + M + + + + +++ NN LV++
Sbjct: 51 NQDDGKLQNMIHEMQQFMNQVDNHLQSESDTVHHFHNKLQELMNNFHHLVHR 102
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 27.2 bits (61), Expect = 9.5
Identities = 18/94 (19%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 144 QGMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGLHELRHCAENDSIGEHQYYRSLL- 202
+ + LH+ I H +LK N ++ +++TDFG + + + R +
Sbjct: 135 EVICALHKLNI-VHRDLKPENILLDDDMNIKLTDFGF--------SCQLDPGEKLREVCG 185
Query: 203 ---WKAPELLRDTHAPIRG--TQKADVYAFAVIL 231
+ APE++ + ++ D+++ VI+
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>3vj8_A Squalene synthase; farnesyl-diphosphate farnesyltransferase,
head-TO-head synth cholesterol biosynthesis,
oxidoreductase, transferase; 1.52A {Homo sapiens} PDB:
3vj9_A 3vja_A 3vjb_A 3vjc_A* 3asx_A* 3lee_A* 3q2z_A*
3q30_A* 1ezf_A*
Length = 343
Score = 27.1 bits (60), Expect = 9.8
Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 17/95 (17%)
Query: 253 DCEEPFRPNLELLRDSCEPFVLACMRDCWAEAPESRPD------FPTIRARLKHMKDGKQ 306
D + LL + F + W D FPTI +++ + Q
Sbjct: 58 DMTISVEKKVPLLHN----FHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQ 113
Query: 307 KNIIDQMMEMMEKQKNIIDQMMEMMEKYANNLEDL 341
I D M M E ++K+ + ++
Sbjct: 114 TVIADICRRM-------GIGMAEFLDKHVTSEQEW 141
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 27.4 bits (61), Expect = 9.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 145 GMTFLHRSPIGCHGNLKSSNCVVTSRWVLQVTDFGL 180
G F+H S I H +LK +NC++ ++V DFGL
Sbjct: 141 GENFIHESGI-IHRDLKPANCLLNQDCSVKVCDFGL 175
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.137 0.420
Gapped
Lambda K H
0.267 0.0707 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,488,073
Number of extensions: 403300
Number of successful extensions: 1401
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1199
Number of HSP's successfully gapped: 232
Length of query: 413
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 317
Effective length of database: 4,021,377
Effective search space: 1274776509
Effective search space used: 1274776509
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.2 bits)